BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008105
(577 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FRS4|PPR22_ARATH Pentatricopeptide repeat-containing protein At1g08610
OS=Arabidopsis thaliana GN=At1g08610 PE=2 SV=1
Length = 559
Score = 625 bits (1613), Expect = e-178, Method: Compositional matrix adjust.
Identities = 301/511 (58%), Positives = 391/511 (76%), Gaps = 5/511 (0%)
Query: 46 RDLGAGRNVSLKCRGLPGNVCIDRVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSL 105
+++G ++V +C GL +VCID VN D E SSE H V LR K S
Sbjct: 38 QEIGLKKDVFFRCHGLLSSVCIDNVN--DHAERSSEFHHYGVGTNLRARVKPMKQFGLS- 94
Query: 106 PSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRI 165
SDGP ENDE+TNN+IL N CS GKLTDA KL+++MAR NQ+P F C NL+RGL RI
Sbjct: 95 --SDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARI 152
Query: 166 DRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
D+++KA +L++MVMSGGVPDTITYNM++G LCK+G IR+A+ LL++MS+SG PDVITY
Sbjct: 153 DQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITY 212
Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
NT++R MFD G +QAI FWKDQL+ GCPP++ITYT+L+E VC+ CG ARAIEVL+DMA+
Sbjct: 213 NTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAV 272
Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
EGC PDIVTYNSLVN++C++G ++ VI ++LS G+E N++TYNTLLHSL S WD
Sbjct: 273 EGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDE 332
Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
V++IL+IM + S+ PTV TYNILINGLCK L+ RAI+ F QM+ + C PDIVTYNTVLG
Sbjct: 333 VEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLG 392
Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
A+ KEGM+++A++LL LL + C P LITYN++IDGLAKKG M+KA+ LY QM++ GI P
Sbjct: 393 AMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFP 452
Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
DDIT R+LI+GFCRA+ VEEA +LKE RGN +R S YRLVI GLCK K+++MAI+V+
Sbjct: 453 DDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVV 512
Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
E+M++ KPD+T+++ IVK V + GM EA
Sbjct: 513 EIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/503 (40%), Positives = 301/503 (59%), Gaps = 39/503 (7%)
Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
S + F D ++NN + Q G+L + K ++ M +PD C LIRG R+
Sbjct: 93 SVNSSFALEDVESNNHLRQ-MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLG 151
Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
+ KA+K+L+I+ SG VPD ITYN+M+ G CK G+I +A+++LD MSVS PDV+TYN
Sbjct: 152 KTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYN 208
Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
TILR++ D+GK KQA+ L++ C P +ITYTILIE C+ G+ A+++LD+M
Sbjct: 209 TILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR 268
Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
GC+PD+VTYN LVN CK+G+ D+A+ +N++ S G +PN IT+N +L S+ S G W
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLV---------------------------- 378
+K+L M SP+V T+NILIN LC+ GL+
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHG 388
Query: 379 -------DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
DRAI +MVS+ C PDIVTYNT+L ALCK+G + +A+++L+ L+ CSP
Sbjct: 389 FCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV 448
Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
LITYNT+IDGLAK G KA+ L +M + PD IT+ +L+ G R +V+EA+
Sbjct: 449 LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH 508
Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
E + G + + ++ GLCKS++ D AI L MI+ KP++T ++ +++ +A +G
Sbjct: 509 EFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEG 568
Query: 552 MTEEAYKLWQKLIEWKVFEKGTT 574
M +EA +L +L + +K +
Sbjct: 569 MAKEALELLNELCNKGLMKKSSA 591
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 281 bits (718), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 154/478 (32%), Positives = 244/478 (51%), Gaps = 36/478 (7%)
Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
KI C G ++ L++ M R+ PD C LI+G + I KA +V++I+
Sbjct: 94 KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILE-K 152
Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
G PD YN ++ G CK +I A +LD M PD +TYN ++ ++ GK A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
+ L C P +ITYTILIE + G+ A++++D+M G PD+ TYN+++
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK------------- 348
CK+G D A ++ NL +G EP+ I+YN LL +L ++G W+ +K
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 349 ----------------------ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
+L +M E +P ++Y+ LI C+ G +D AI
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
M+S C PDIV YNTVL LCK G ++AL++ L CSP +YNT+ L G
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
+A+ + +MM NGI PD+IT+ ++I CR V+EA +LL ++ Y
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512
Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
+V+ G CK+ +++ AI VLE M+ + +P++T ++ +++ + G EA +L L+
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 207/380 (54%), Gaps = 4/380 (1%)
Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
D T N ++ + CSRGKL A K+++ + N P LI + +++A K++
Sbjct: 192 DTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLM 251
Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
M+ G PD TYN ++ G+CK G + A ++ + + GCEPDVI+YN +LR + +
Sbjct: 252 DEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQ 311
Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
GK+++ + C P ++TY+ILI +C+ I A+ +L M +G +PD +Y
Sbjct: 312 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 371
Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
+ L+ C++G+ D A+ + ++S G P+ + YNT+L +L G D +I + E
Sbjct: 372 DPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431
Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
SP +YN + + L G RA++ +M+S PD +TYN+++ LC+EGM++E
Sbjct: 432 VGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDE 491
Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
A +LL + P ++TYN ++ G K +E A+ + M+ NG P++ T+ LI
Sbjct: 492 AFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551
Query: 476 GF----CRADQVEEAVDLLK 491
G RA+ +E A DL++
Sbjct: 552 GIGFAGYRAEAMELANDLVR 571
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 188/331 (56%), Gaps = 1/331 (0%)
Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
+G + +++ + +RKG P +I T LI+ I +A+ V++ + G PD+
Sbjct: 102 SGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFA 160
Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
YN+L+N CK + DDA V++ + S+ P+++TYN ++ SL SRG D K+L+ +
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
+ PTV TY ILI G VD A+ ++M+S+ +PD+ TYNT++ +CKEGM++
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
A +++ L C P +I+YN L+ L +G E+ L +M P+ +T+ LI
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
CR ++EEA++LLK + ++G +Y +I C+ ++D+AI+ LE MIS
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400
Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
PD ++T++ + +G ++A +++ KL E
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGE 431
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 1/219 (0%)
Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
+L+ M ++P V LI G + +A+ +++ K QPD+ YN ++ C
Sbjct: 111 LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALINGFC 169
Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
K +++A ++L + SP +TYN +I L +G ++ A+ + Q++ + P I
Sbjct: 170 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVI 229
Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
T+ LI V+EA+ L+ E+ RG K Y +I G+CK VD A +++ +
Sbjct: 230 TYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNL 289
Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
+PD ++ +++ + + G EE KL K+ K
Sbjct: 290 ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 241 bits (616), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/560 (26%), Positives = 279/560 (49%), Gaps = 37/560 (6%)
Query: 18 PNLQWCSRQVSLQHGVVNNHRTQFYSQLRDLGAGRNVSL-----KCRGLPGNV------- 65
P+ CS V GV ++R ++L DL V+L K R P V
Sbjct: 30 PSFSHCSFWVRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLS 89
Query: 66 CIDRVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQ 125
I ++N+ D V+++ ++++ L I+ + S+ ++
Sbjct: 90 AIAKMNKFDL--------VISLGEQMQNLGISHNLYTYSI-----------------LIN 124
Query: 126 NFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVP 185
FC R +L+ A ++ M + PD +L+ G +RI A ++ MV G P
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
D+ T+N ++ GL + + A+AL+D M V GC+PD++TY ++ + G A+
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
K + P ++ Y +I+ +C + A+ + +M +G P++VTYNSL+ C
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
G++ DA ++++++ R + PN +T++ L+ + G +K+ D M + S P +FTY
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
+ LING C + +D A + F M+SK+C P++VTYNT++ CK ++E ++L ++
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
+TY TLI G + + A +++ QM+ +G+ PD +T+ L+ G C +VE
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484
Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
A+ + + + + + Y ++I G+CK+ KV+ + + KP+ ++T++
Sbjct: 485 ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 544
Query: 546 KVADDGMTEEAYKLWQKLIE 565
G+ EEA L++++ E
Sbjct: 545 GFCRKGLKEEADALFREMKE 564
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/479 (28%), Positives = 226/479 (47%), Gaps = 36/479 (7%)
Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
E D T N +L FC +++DA L+ M PD LI GL R +R +A
Sbjct: 148 EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVA 207
Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
++ MV+ G PD +TY ++V GLCKRG I A++LL +M EP V+ YNTI+ +
Sbjct: 208 LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267
Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
+ A+ + + KG P ++TY LI +C + A +L DM +P++V
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
T+++L++ K+GK +A + + ++ R ++P+ TY++L++ D + ++M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387
Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAIN------------------------------ 383
P V TYN LI G CK VD +
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447
Query: 384 -----SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
F QMVS PDI+TY+ +L LC G + AL + L S P + TYN +
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
I+G+ K G +E L+ + G+ P+ +T+ T++ GFCR EEA L +E+ + G
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
+ Y +I + + +++ M S R+ D + +V + DG ++++
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLHDGRLDKSF 625
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 241 bits (616), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 130/453 (28%), Positives = 242/453 (53%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
V ++ T N ++ C R +L+ A ++ M + P +L+ G +RI +A
Sbjct: 96 VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
++ MV G PDT+T+ +V GL + + A+AL++ M V GC+PD++TY ++ +
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
G+ A+ + ++ Y+ +I+ +CK + A+ + +M +G PD+
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
TY+SL++ C G++ DA +++++L R + PN +T+N+L+ + G +K+ D
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 335
Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
M + S P + TYN LING C + +D A F MVSK+C PD+VTYNT++ CK
Sbjct: 336 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395
Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
+ + ++L ++ +TY TLI G + + A +++ QM+ +G+ P+ +T+ T
Sbjct: 396 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNT 455
Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
L+ G C+ ++E+A+ + + + K + Y ++ G+CK+ KV+ + +
Sbjct: 456 LLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 515
Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
KPD ++T++ G+ EEAY L+ K+ E
Sbjct: 516 VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 131/445 (29%), Positives = 226/445 (50%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T N +L FC ++++A L+D M PD L+ GL + ++ +A +++ M
Sbjct: 137 TLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM 196
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
V+ G PD +TY ++ GLCKRG+ A+ LL++M E DV+ Y+T++ ++
Sbjct: 197 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHV 256
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
A+ + + KG P + TY+ LI +C + A +L DM +P++VT+NSL
Sbjct: 257 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSL 316
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
++ K+GK +A + + ++ R ++PN +TYN+L++ D +I +M
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
P V TYN LING CK V + F M + + VTY T++ + + A
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
+ + P ++TYNTL+DGL K G +EKAMV++ + ++ + PD T+ + G C
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496
Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
+A +VE+ DL + +G K AY +I G CK + A + M PD
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSG 556
Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
++T+++ DG + +L +++
Sbjct: 557 TYNTLIRAHLRDGDKAASAELIKEM 581
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 236/450 (52%), Gaps = 6/450 (1%)
Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
K+ +N KL +A L M + P L+ + ++ + + + M +
Sbjct: 35 KLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEIL 94
Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
G + TYN+M+ LC+R Q+ A+A+L +M G P ++T N++L + +A
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
+ + G P +T+T L+ + + + A+ +++ M ++GC PD+VTY +++N
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS-- 359
CK+G+ D A+ ++N + +E + + Y+T++ SL + VD L++ E +
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK---YRHVDDALNLFTEMDNKGI 271
Query: 360 -PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
P VFTY+ LI+ LC YG A + M+ + P++VT+N+++ A KEG L EA +
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
L + S P ++TYN+LI+G +++A ++ M+ PD +T+ TLI GFC
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
+A +V + ++L +++ +RG Y +IHG ++ D A V + M+S P+
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
++T++ + +G E+A +++ L + K+
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Score = 192 bits (487), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 183/378 (48%)
Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
D T ++ C RG+ A L++ M + D +I L + ++ A +
Sbjct: 204 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLF 263
Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
M G PD TY+ ++ LC G+ A LL +M P+V+T+N+++
Sbjct: 264 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKE 323
Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
GK +A + + +++ P ++TY LI C + A ++ M + C PD+VTY
Sbjct: 324 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383
Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
N+L+N CK K D + + ++ RG+ N++TY TL+H D + M
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443
Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
P + TYN L++GLCK G +++A+ F + +PDI TYN + +CK G + +
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503
Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
L L+ P +I YNT+I G KKG E+A L+ +M E+G PD T+ TLI
Sbjct: 504 GWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIR 563
Query: 476 GFCRADQVEEAVDLLKEI 493
R + +L+KE+
Sbjct: 564 AHLRDGDKAASAELIKEM 581
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 172/358 (48%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
+E D + ++ + C + DA L M + PD +LI L R AS
Sbjct: 236 IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
++L M+ P+ +T+N ++ K G++ A L DEM +P+++TYN+++
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
+ + +A + + K C P ++TY LI CK + +E+ DM+ G +
Sbjct: 356 CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT 415
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
VTY +L++ + D+A +V ++S G+ PN +TYNTLL L G + + +
Sbjct: 416 VTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 475
Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
+ ++ P ++TYNI+ G+CK G V+ + F + K +PD++ YNT++ CK+G+
Sbjct: 476 LQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGL 535
Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
EA L + P TYNTLI + G + L +M + D T+
Sbjct: 536 KEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 593
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 141/299 (47%), Gaps = 1/299 (0%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T N ++ F GKL +A KL D M +R+ P+ +LI G DR+++A ++ +M
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
V +PD +TYN ++ G CK ++ + L +MS G + +TY T++ F
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
A +K + G P ++TY L++ +CK + +A+ V + + PDI TYN +
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
CK GK +D + +L +G++P+ I YNT++ +G + + M E
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
P TYN LI + G + +M S D TY V L +G L++
Sbjct: 552 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML-HDGRLDKGF 609
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 240 bits (612), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 242/453 (53%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
+ D + N ++ FC R +L A ++ M + PD +L+ G RI +A
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
++ M + P+T+T+N ++ GL + A+AL+D M GC+PD+ TY T++ +
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
G A+ K + ++ YT +I+ +C + A+ + +M +G P++
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
VTYNSL+ C G++ DA ++++++ R + PN +T++ L+ + G +K+ D
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
M + S P +FTY+ LING C + +D A + F M+SK+C P++VTYNT++ CK
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
+ E ++L ++ +TYNTLI GL + G + A ++ +M+ +G+ PD IT+
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
L+ G C+ ++E+A+ + + + K + Y ++I G+CK+ KV+ + +
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
KP+ +++T++ G+ EEA L++++ E
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 226/450 (50%)
Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
E D T + +L +C ++++A L+D M P+ LI GL ++ +A
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
++ MV G PD TY +V GLCKRG I A++LL +M E DV+ Y TI+ +
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC 266
Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
+ A+ + + KG P ++TY LI +C + A +L DM +P++V
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 326
Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
T+++L++ K+GK +A + + ++ R ++P+ TY++L++ D + ++M
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
P V TYN LI G CK V+ + F +M + + VTYNT++ L + G
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
+ A ++ + P +ITY+ L+DGL K G +EKA+V++ + ++ + PD T+ +
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
I G C+A +VE+ DL + +G K Y +I G C+ + A + M
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
P+ ++T+++ DG + +L +++
Sbjct: 567 LPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 241/484 (49%), Gaps = 28/484 (5%)
Query: 91 LRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP 150
LRG+ + S+D EK + +L + KL DA L M + +P
Sbjct: 35 LRGVYFSAASYDYR------------EKLSRNVLLDL----KLDDAVDLFGEMVQSRPLP 78
Query: 151 ---DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAI 207
+F+ ++ I + + D + + +Q + +S D +YN+++ C+R Q+ A+
Sbjct: 79 SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRIS---YDLYSYNILINCFCRRSQLPLAL 135
Query: 208 ALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQV 267
A+L +M G EPD++T +++L + +A+ P +T+ LI +
Sbjct: 136 AVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL 195
Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
+ A+ ++D M GC PD+ TY ++VN CK+G D A+ ++ + +E +
Sbjct: 196 FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 255
Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHS---PTVFTYNILINGLCKYGLVDRAINS 384
+ Y T++ +L + + V+ L++ E + P V TYN LI LC YG A
Sbjct: 256 VIYTTIIDALCN---YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 312
Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
+ M+ + P++VT++ ++ A KEG L EA +L + S P + TY++LI+G
Sbjct: 313 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
+++A ++ M+ P+ +T+ TLI GFC+A +VEE ++L +E+ +RG
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432
Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
Y +I GL ++ DMA ++ + M+S PD +S ++ + G E+A +++ L
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Query: 565 EWKV 568
+ K+
Sbjct: 493 KSKM 496
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 172/362 (47%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
+E D I+ C+ + DA L M + P+ +LIR L R AS
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 310
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
++L M+ P+ +T++ ++ K G++ A L DEM +PD+ TY++++
Sbjct: 311 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
+ + +A ++ + K C P ++TY LI+ CK + +E+ +M+ G +
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
VTYN+L+ + G D A + ++S G+ P+ ITY+ LL L G + + +
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 490
Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
+ ++ P ++TYNI+I G+CK G V+ + F + K +P+++ Y T++ C++G+
Sbjct: 491 LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGL 550
Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
EA L + P TYNTLI + G + L +M G D T
Sbjct: 551 KEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISM 610
Query: 473 LI 474
+I
Sbjct: 611 VI 612
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/474 (29%), Positives = 240/474 (50%), Gaps = 15/474 (3%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T N +++ FC G + A L D M + +P+ LI G ++ +I+ K+L+ M
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM 266
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
+ G P+ I+YN+++ GLC+ G+++ +L EM+ G D +TYNT+++ G F
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF 326
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
QA+ + LR G P +ITYT LI +CK + RA+E LD M + G P+ TY +L
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL 386
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
V+ ++G ++A V+ + G P+ +TYN L++ G + +L+ M E
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
SP V +Y+ +++G C+ VD A+ +MV K +PD +TY++++ C++ EA
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
L + P TY LI+ +G +EKA+ L+ +M+E G+ PD +T+ LI G
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH---------------GLCKSKKVDMAIQ 523
+ + EA LL ++ + + Y +I G C + A Q
Sbjct: 567 KQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ 626
Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
V E M+ +KPD T ++ ++ G +AY L++++++ T++A
Sbjct: 627 VFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIA 680
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 219/413 (53%), Gaps = 1/413 (0%)
Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCK-RGQIRSAIALLDEMSVS 216
+++ R+ I+KA ++ + G +P ++YN ++ + + I A + EM S
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
P+V TYN ++R G A+ + KGC P ++TY LI+ CK I
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
++L MA++G P++++YN ++N C++G+ + V+ + RG + +TYNTL+
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
G + + M +P+V TY LI+ +CK G ++RA+ +QM + P+
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379
Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
TY T++ ++G +NEA ++L +N + SP ++TYN LI+G G ME A+ +
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439
Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
M E G+SPD +++ T++ GFCR+ V+EA+ + +E+ ++G K Y +I G C+ +
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499
Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
+ A + E M+ PD+ ++ ++ +G E+A +L +++E V
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 205/403 (50%), Gaps = 1/403 (0%)
Query: 163 IRIDR-IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPD 221
IR R I A V + M+ S P+ TYN+++ G C G I A+ L D+M GC P+
Sbjct: 180 IRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPN 239
Query: 222 VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD 281
V+TYNT++ K + KG P LI+Y ++I +C++ + VL
Sbjct: 240 VVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLT 299
Query: 282 DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
+M G S D VTYN+L+ CK+G + A+++ +L G+ P+ ITY +L+HS+ G
Sbjct: 300 EMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG 359
Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
+ + LD M P TY L++G + G ++ A +M P +VTYN
Sbjct: 360 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419
Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
++ C G + +A+ +L + SP +++Y+T++ G + +++A+ + +M+E
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479
Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
GI PD IT+ +LI GFC + +EA DL +E+ + G Y +I+ C ++ A
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
+Q+ M+ PD +S ++ + T EA +L KL
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582
Score = 212 bits (539), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 204/379 (53%), Gaps = 7/379 (1%)
Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF----W 245
++++V + I A++++ G P V++YN +L + K+ I F +
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATI---RSKRNISFAENVF 193
Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
K+ L P + TY ILI C I A+ + D M +GC P++VTYN+L++ CK
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
K DD ++ ++ +G+EPN I+YN +++ L G V +L MN +S TY
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
N LI G CK G +A+ +M+ P ++TY +++ ++CK G +N A++ L +
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
P TY TL+DG ++KG M +A + +M +NG SP +T+ LI G C ++E+
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
A+ +L+++ ++G +Y V+ G C+S VD A++V M+ KPD +S++++
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 546 KVADDGMTEEAYKLWQKLI 564
+ T+EA L+++++
Sbjct: 494 GFCEQRRTKEACDLYEEML 512
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 199/436 (45%), Gaps = 15/436 (3%)
Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
DE T N +++ +C G A + M R P +LI + + + +A + L
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
M + G P+ TY +V G ++G + A +L EM+ +G P V+TYN ++
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
GK + AI +D KG P +++Y+ ++ C+ + A+ V +M +G PD +TY
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
+SL+ C+Q + +A + +L G+ P+ TY L+++ G + ++ + M E
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT------------- 402
P V TY++LINGL K A ++ + P VTY+T
Sbjct: 549 KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSV 608
Query: 403 --VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
++ C +GM+ EA Q+ + G + P YN +I G + G + KA LY +M++
Sbjct: 609 VSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVK 668
Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
+G +T L+ + +V E ++ + + ++++ + +D+
Sbjct: 669 SGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDV 728
Query: 521 AIQVLELMISSRYKPD 536
+ VL M + P+
Sbjct: 729 VLDVLAEMAKDGFLPN 744
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 160/342 (46%), Gaps = 36/342 (10%)
Query: 260 YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK-YDDAVLVINNL 318
+ ++++ + I +A+ ++ G P +++YN++++ + + + A V +
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
L + PN TYN L+ G D + D M P V TYN LI+G CK +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
D M K +P++++YN V+ LC+EG + E +L +N S +TYNTL
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG- 497
I G K+G +A+V++ +M+ +G++P IT+ +LI C+A + A++ L ++ RG
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 498 ----------------NKMRNSAYRL------------------VIHGLCKSKKVDMAIQ 523
N AYR+ +I+G C + K++ AI
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
VLE M PD +ST++ +EA ++ ++++E
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
++ D T + ++Q FC + + +A L + M R PD LI +EKA
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
++ MV G +PD +TY++++ GL K+ + R A LL ++ P +TY+T++
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
N +FK + LI+ C + + A +V + M + PD
Sbjct: 601 -SNIEFKSVVS-------------------LIKGFCMKGMMTEADQVFESMLGKNHKPDG 640
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
YN +++ C+ G A + ++ G +++T L+ +L G + ++ ++
Sbjct: 641 TAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVI 698
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 84/164 (51%), Gaps = 1/164 (0%)
Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG-LAKKGCMEKA 451
C ++ V+ + + ++++AL ++HL P +++YN ++D + K + A
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189
Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
++ +M+E+ +SP+ T+ LI GFC A ++ A+ L ++ +G Y +I G
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 249
Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
CK +K+D ++L M +P+ ++ ++ + +G +E
Sbjct: 250 YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE 293
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 236 bits (601), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 128/447 (28%), Positives = 234/447 (52%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T N ++ FC R +++ A L+ M + P +L+ G RI A ++ M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
V G PDTIT+ ++ GL + A+AL+D M GC+P+++TY ++ + G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
A+ ++ + +I+ +CK + A+ + +M +G P++VTY+SL
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
++ C G++ DA ++++++ + + PN +T+N L+ + G + +K+ D M + S
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
P +FTYN L+NG C + +D+A F MVSK+C PD+VTYNT++ CK + + +
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
L ++ +TY TLI GL G + A ++ QM+ +G+ PD +T+ L+ G C
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
++E+A+++ + K K+ Y +I G+CK+ KVD + + KP+
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
++T++ + + +EAY L +K+ E
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKE 568
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 235/457 (51%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T + +L +C +++DA L+D M PD LI GL ++ +A ++ M
Sbjct: 157 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
V G P+ +TY ++V GLCKRG A+ LL++M + E DV+ +NTI+ ++
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 276
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
A+ +K+ KG P ++TY+ LI +C + A ++L DM + +P++VT+N+L
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
++ K+GK+ +A + ++++ R ++P+ TYN+L++ D ++ + M
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
P V TYN LI G CK V+ F +M + D VTY T++ L +G + A +
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456
Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
+ + P ++TY+ L+DGL G +EKA+ ++ M ++ I D + T+I G C
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 516
Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
+A +V++ DL + +G K Y +I GLC + + A +L+ M P+
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 576
Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
++T+++ DG + +L +++ + +T+
Sbjct: 577 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 613
Score = 219 bits (557), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 223/443 (50%)
Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
NK+L K L + M R + + LI R +I A +L M+
Sbjct: 89 NKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
G P +T + ++ G C +I A+AL+D+M G PD IT+ T++ +F + K +
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
A+ +++GC P L+TY +++ +CK+ A+ +L+ M D+V +N++++
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 268
Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
CK DDA+ + + ++G+ PN +TY++L+ L S G W ++L M E +P
Sbjct: 269 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 328
Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
+ T+N LI+ K G A ++ M+ ++ PDI TYN+++ C L++A Q+
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
+ C P ++TYNTLI G K +E L+ +M G+ D +T+ TLI G
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 448
Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
+ A + K++ G Y +++ GLC + K++ A++V + M S K D ++
Sbjct: 449 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 508
Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
+T+++ + G ++ + L+ L
Sbjct: 509 TTMIEGMCKAGKVDDGWDLFCSL 531
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/445 (29%), Positives = 227/445 (51%), Gaps = 12/445 (2%)
Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIP---DFHFCINLIRGLIRIDRIEKASKVLQIM 178
+IL+N KL DA L M + +P +F+ ++ I + + D + + +Q +
Sbjct: 55 EILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
+ G+ TYN+++ C+R QI A+ALL +M G EP ++T +++L +
Sbjct: 115 EIVHGL---YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
A+ + G P IT+T LI + + A+ ++D M GC P++VTY +
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
VN CK+G D A+ ++N + + +E + + +NT++ SL + VD L++ E
Sbjct: 232 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK---YRHVDDALNLFKEMET 288
Query: 359 S---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
P V TY+ LI+ LC YG A + M+ K P++VT+N ++ A KEG E
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 348
Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
A +L + S P + TYN+L++G ++KA ++ M+ PD +T+ TLI
Sbjct: 349 AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIK 408
Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
GFC++ +VE+ +L +E+ RG Y +I GL D A +V + M+S P
Sbjct: 409 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 468
Query: 536 DDTVFSTIVKKVADDGMTEEAYKLW 560
D +S ++ + ++G E+A +++
Sbjct: 469 DIMTYSILLDGLCNNGKLEKALEVF 493
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 206/398 (51%)
Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
+++ A + MV S +P + +N ++ + K + I+L ++M + TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
++ + A+ ++ G P ++T + L+ C I+ A+ ++D M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
G PD +T+ +L++ K +AV +++ ++ RG +PN +TY +++ L RG D
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
+L+ M A V +N +I+ LCKY VD A+N F +M +K +P++VTY++++
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
LC G ++A QLL + +P L+T+N LID K+G +A LY M++ I PD
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
T+ +L+ GFC D++++A + + + + Y +I G CKSK+V+ ++
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
M D ++T+++ + DG + A K++++++
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 161/334 (48%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
+E D N I+ + C + DA L M + P+ +LI L R AS
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 315
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
++L M+ P+ +T+N ++ K G+ A L D+M +PD+ TYN+++
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
+ + +A ++ + K C P ++TY LI+ CK + E+ +M+ G D
Sbjct: 376 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
VTY +L+ G D+A V ++S G+ P+ +TY+ LL L + G + ++ D
Sbjct: 436 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 495
Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
M ++ ++ Y +I G+CK G VD + F + K +P++VTYNT++ LC + +
Sbjct: 496 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 555
Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
L EA LL + P TYNTLI + G
Sbjct: 556 LQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Score = 135 bits (341), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 173/376 (46%), Gaps = 39/376 (10%)
Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
Y ILR + K AIG + ++ P ++ + L+ + K I + + M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL--GSRGC 342
+ TYN L+N C++ + A+ ++ ++ G EP+ +T ++LL+ G R
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR-I 171
Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
DAV ++D M E + P T+ LI+GL + A+ ++MV + CQP++VTY
Sbjct: 172 SDAV-ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
V+ LCK G + AL LL+ + + ++ +NT+ID L K ++ A+ L+ +M G
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290
Query: 463 ISPDDITHRTLIWGFCR-----------ADQVE------------------------EAV 487
I P+ +T+ +LI C +D +E EA
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
L ++ KR Y +++G C ++D A Q+ E M+S PD ++T++K
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 548 ADDGMTEEAYKLWQKL 563
E+ +L++++
Sbjct: 411 CKSKRVEDGTELFREM 426
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 133/279 (47%)
Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
P IV +N L++ K K+D + + + + TYN L++ R +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
L M + + P++ T + L+NG C + A+ +QMV +PD +T+ T++ L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
+EA+ L+ + C P L+TY +++GL K+G + A+ L +M I D +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
T+I C+ V++A++L KE+ +G + Y +I LC + A Q+L MI
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
+ P+ F+ ++ +G EA KL+ +I+ +
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 235 bits (599), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 235/453 (51%), Gaps = 3/453 (0%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
+ +D T + + FC R +L+ A ++ M + PD +L+ G RI A
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
++ MV G PDT T+ ++ GL + A+AL+D+M GC+PD++TY T++ +
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
G A+ ++ + +I+ +CK + A+++ +M +G P++
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
VTYNSL+N C G++ DA +++N+L + + PN +T+N L+ + G +K+ +
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
M + S P TYN+LING C + +D A F MVSK+C P+I TYNT++ CK
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
+ + ++L ++ +TY T+I G + G + A +++ QM+ N + D +T+
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473
Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
L+ G C +++ A+ + K + K ++ Y +I G+CK+ KV + +L S
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG---EAWDLFCSLS 530
Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
KPD ++T++ + + +EA L++K+ E
Sbjct: 531 IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/433 (29%), Positives = 216/433 (49%), Gaps = 2/433 (0%)
Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
K+ DA L M + P L+ + ++++ E + + M G D TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
+ + C+R Q+ A+A+L +M G EPD++T +++L + + A+ +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
G P T+T LI + + A+ ++D M GC PD+VTY ++VN CK+G D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 312 VLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
+ ++N + + ++ N + +NT++ SL R AVD + M P V TYN LIN
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE-METKGIRPNVVTYNSLIN 301
Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
LC YG A + M+ K P++VT+N ++ A KEG L EA +L + S P
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
ITYN LI+G +++A ++ M+ P+ T+ TLI GFC+ +VE+ V+L
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 421
Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
+E+ +RG Y +I G ++ D A V + M+S+R D +S ++ +
Sbjct: 422 REMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSY 481
Query: 551 GMTEEAYKLWQKL 563
G + A +++ L
Sbjct: 482 GKLDTALVIFKYL 494
Score = 199 bits (505), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 135/479 (28%), Positives = 230/479 (48%), Gaps = 39/479 (8%)
Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
E D T + +L +C +++DA L+D M PD LI GL ++ +A
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
++ MV G PD +TY +V GLCKRG I A+ LL++M + + +V+ +NTI+ ++
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269
Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
+ A+ + + KG P ++TY LI +C + A +L +M + +P++V
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
T+N+L++ K+GK +A + ++ R ++P++ITYN L++ D ++ M
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 354 NEASHSPTVFTYNILINGLCK----------------YGLV------------------- 378
P + TYN LING CK GLV
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449
Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
D A F QMVS DI+TY+ +L LC G L+ AL + L S + YNT+
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509
Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
I+G+ K G + +A L+ + I PD +T+ T+I G C ++EA DL +++ + G
Sbjct: 510 IEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGT 566
Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
+ Y +I + + ++++ M SS + D + S +V + DG ++++
Sbjct: 567 LPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS-LVTNMLHDGRLDKSF 624
Score = 191 bits (486), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 209/404 (51%)
Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
I +++ A + MV S P + +N ++ + K + I+L ++M G D+ T
Sbjct: 61 IIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120
Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
Y+ + + A+ ++ G P ++T + L+ C I+ A+ ++D M
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
G PD T+ +L++ K +AV +++ ++ RG +P+ +TY T+++ L RG D
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
+L+ M A V +N +I+ LCKY V+ A++ F +M +K +P++VTYN+++
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
LC G ++A +LL + +P ++T+N LID K+G + +A L+ +M++ I
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID 360
Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
PD IT+ LI GFC ++++EA + K + + Y +I+G CK K+V+ +++
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
M + ++TI++ G + A ++++++ +V
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRV 464
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 103/231 (44%), Gaps = 12/231 (5%)
Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTY-NILINGLCKYGLVDRAINSFNQMVSKN 392
+L GCW E S + Y IL N L VD A++ F MV
Sbjct: 30 FFNLCGSGCW-----------ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSR 78
Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
P IV +N +L A+ K + L + S L TY+ I+ ++ + A+
Sbjct: 79 PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLAL 138
Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
+ +MM+ G PD +T +L+ G+C + ++ +AV L+ ++ + G K + +IHGL
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
K A+ +++ M+ +PD + T+V + G + A L K+
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM 249
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 9/203 (4%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIP-DFHFCINLIRGLIRIDRIEKASKVLQI 177
T I+Q F G D+++++ N++P D L+ GL +++ A + +
Sbjct: 435 TYTTIIQGFFQAGD-CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKY 493
Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
+ S + YN M+ G+CK G++ A L +S+ +PDV+TYNT++ +
Sbjct: 494 LQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSI---KPDVVTYNTMISGLCSKRL 550
Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
++A ++ G P TY LI + C A + E++ +M G D T S
Sbjct: 551 LQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTI-S 609
Query: 298 LVNFSCKQGKYDDAVLVINNLLS 320
LV G+ D + L N+LS
Sbjct: 610 LVTNMLHDGRLDKSFL---NMLS 629
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 234 bits (598), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 135/448 (30%), Positives = 234/448 (52%), Gaps = 1/448 (0%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T N +Q C RG+L A +++ + + PD NLI GL + + ++A L M
Sbjct: 253 TYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
V G PD+ TYN ++ G CK G ++ A ++ + +G PD TY +++ + G+
Sbjct: 313 VNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGET 372
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
+A+ + + L KG P +I Y LI+ + Q I A ++ ++M+ +G P++ T+N L
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNIL 432
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
VN CK G DA ++ ++S+G P+ T+N L+H ++ + +ILD+M +
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV 492
Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
P V+TYN L+NGLCK + + ++ MV K C P++ T+N +L +LC+ L+EAL
Sbjct: 493 DPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALG 552
Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN-GISPDDITHRTLIWGF 477
LL + S +P +T+ TLIDG K G ++ A L+ +M E +S T+ +I F
Sbjct: 553 LLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAF 612
Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
V A L +E+ R YRL++ G CK+ V++ + L M+ + + P
Sbjct: 613 TEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSL 672
Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIE 565
T ++ + + EA + ++++
Sbjct: 673 TTLGRVINCLCVEDRVYEAAGIIHRMVQ 700
Score = 216 bits (549), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 216/410 (52%), Gaps = 3/410 (0%)
Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
L+R L + +++ K+L ++ G +P+ TYN+ + GLC+RG++ A+ ++ + G
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281
Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
+PDVITYN ++ + N KF++A + + +G P TY LI CK + A
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341
Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
++ D G PD TY SL++ C +G+ + A+ + N L +G++PN I YNTL+ L
Sbjct: 342 RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
++G ++ + M+E P V T+NIL+NGLCK G V A M+SK PDI
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461
Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
T+N ++ + + AL++L ++ + P + TYN+L++GL K E M Y
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
M+E G +P+ T L+ CR +++EA+ LL+E+ + + +I G CK+
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 518 VDMAIQVLELMISSRYKPDDT--VFSTIVKKVADDGMTEEAYKLWQKLIE 565
+D A + M YK + ++ I+ + A KL+Q++++
Sbjct: 582 LDGAYTLFRKM-EEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVD 630
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/516 (25%), Positives = 244/516 (47%), Gaps = 71/516 (13%)
Query: 124 LQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGG 183
++N+ +GK+ +A + + M + P ++ L+ ++A KV M G
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI-------------------- 223
PD ++ + + CK + +A+ LL+ MS GCE +V+
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 224 ---------------TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
T+N +LR + G K+ +++G P L TY + I+ +C
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
++ + A+ ++ + +G PD++TYN+L+ CK K+ +A + + +++ G+EP+S
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
TYNTL+ G ++I+ P FTY LI+GLC G +RA+ FN+
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC- 447
+ K +P+++ YNT++ L +GM+ EA QL + ++ P + T+N L++GL K GC
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442
Query: 448 ----------------------------------MEKAMVLYGQMMENGISPDDITHRTL 473
ME A+ + M++NG+ PD T+ +L
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502
Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
+ G C+ + E+ ++ K + ++G + +++ LC+ +K+D A+ +LE M +
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562
Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE-WKV 568
PD F T++ +G + AY L++K+ E +KV
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKV 598
Score = 202 bits (513), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 213/425 (50%), Gaps = 7/425 (1%)
Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
D T N ++ C K +A + M PD + LI G + ++ A +++
Sbjct: 285 DVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIV 344
Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
V +G VPD TY ++ GLC G+ A+AL +E G +P+VI YNT+++ + +
Sbjct: 345 GDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQ 404
Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
G +A + KG P + T+ IL+ +CK ++ A ++ M +G PDI T+
Sbjct: 405 GMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTF 464
Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
N L++ Q K ++A+ +++ +L G++P+ TYN+LL+ L ++ V + M E
Sbjct: 465 NILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE 524
Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
+P +FT+NIL+ LC+Y +D A+ +M +K+ PD VT+ T++ CK G L+
Sbjct: 525 KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDG 584
Query: 416 ALQLLHLLNG----SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
A L + SS +P TYN +I +K + A L+ +M++ + PD T+R
Sbjct: 585 AYTLFRKMEEAYKVSSSTP---TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641
Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
++ GFC+ V L E+ + G + VI+ LC +V A ++ M+
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Query: 532 RYKPD 536
P+
Sbjct: 702 GLVPE 706
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 190/424 (44%), Gaps = 3/424 (0%)
Query: 77 EWSSESHVLAVNKKLRGLTITKKSHDPS--LPSSDGPFVENDEKTNNKILQNFCSRGKLT 134
E + V+ N + GL K + L +E D T N ++ +C G +
Sbjct: 279 EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ 338
Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
A +++ +PD +LI GL +A + + G P+ I YN ++
Sbjct: 339 LAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 398
Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
GL +G I A L +EMS G P+V T+N ++ + G A G K + KG
Sbjct: 399 KGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF 458
Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
P + T+ ILI Q + A+E+LD M G PD+ TYNSL+N CK K++D +
Sbjct: 459 PDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMET 518
Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
++ +G PN T+N LL SL D +L+ M S +P T+ LI+G CK
Sbjct: 519 YKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCK 578
Query: 375 YGLVDRAINSFNQM-VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
G +D A F +M + TYN ++ A ++ + A +L + P
Sbjct: 579 NGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGY 638
Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
TY ++DG K G + +MMENG P T +I C D+V EA ++ +
Sbjct: 639 TYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRM 698
Query: 494 GKRG 497
++G
Sbjct: 699 VQKG 702
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 143/298 (47%), Gaps = 14/298 (4%)
Query: 275 RAIEVLDDMAIE-GCSPDIVTYNSLVNFSCKQGKYD--DAVLV-----INNLLSRGMEPN 326
+A+E+ + M E G + TY S++ GK++ + VLV + N + G+
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGV--- 78
Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
Y + + G +G + + M+ PTVF+YN +++ L G D+A +
Sbjct: 79 ---YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYM 135
Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
+M + PD+ ++ + + CK + AL+LL+ ++ C ++ Y T++ G ++
Sbjct: 136 RMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEEN 195
Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
+ L+G+M+ +G+S T L+ C+ V+E LL ++ KRG Y
Sbjct: 196 FKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYN 255
Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
L I GLC+ ++D A++++ +I KPD ++ ++ + + +EA K++
Sbjct: 256 LFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMV 313
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 234 bits (597), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 143/436 (32%), Positives = 221/436 (50%), Gaps = 13/436 (2%)
Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDF-----HFCINLI-RGLIRIDRIE 169
DEKT ++Q + G L A ++ R Q+ +F + +N+I G + R+E
Sbjct: 223 DEKTFTTVMQGYIEEGDLDGALRI------REQMVEFGCSWSNVSVNVIVHGFCKEGRVE 276
Query: 170 KASKVLQIMV-MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
A +Q M G PD T+N +V GLCK G ++ AI ++D M G +PDV TYN++
Sbjct: 277 DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSV 336
Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
+ + G+ K+A+ + + C P +TY LI +CK+ + A E+ + +G
Sbjct: 337 ISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
PD+ T+NSL+ C + A+ + + S+G EP+ TYN L+ SL S+G D
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
+L M + + +V TYN LI+G CK A F++M + VTYNT++ LC
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516
Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
K + +A QL+ + P TYN+L+ + G ++KA + M NG PD +
Sbjct: 517 KSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIV 576
Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
T+ TLI G C+A +VE A LL+ I +G + AY VI GL + +K AI + M
Sbjct: 577 TYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREM 636
Query: 529 ISSRYKPDDTVFSTIV 544
+ P D V IV
Sbjct: 637 LEQNEAPPDAVSYRIV 652
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 233/454 (51%), Gaps = 1/454 (0%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
++ D T N +++ C +L A +++ M +PD +++G I ++ A
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS-VSGCEPDVITYNTILRT 231
++ + MV G ++ N++V G CK G++ A+ + EMS G PD T+NT++
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
+ G K AI L++G P + TY +I +CK + A+EVLD M CSP+
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364
Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
VTYN+L++ CK+ + ++A + L S+G+ P+ T+N+L+ L ++ +
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424
Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
M P FTYN+LI+ LC G +D A+N QM C ++TYNT++ CK
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN 484
Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
EA ++ + S +TYNTLIDGL K +E A L QM+ G PD T+
Sbjct: 485 KTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYN 544
Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
+L+ FCR +++A D+++ + G + Y +I GLCK+ +V++A ++L +
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
++ +++ + T EA L+++++E
Sbjct: 605 GINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/437 (29%), Positives = 232/437 (53%), Gaps = 7/437 (1%)
Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
+ + DG F D+ T N ++ C G + A +++D+M + PD + ++I GL +
Sbjct: 285 MSNQDGFF--PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK 342
Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
+ +++A +VL M+ P+T+TYN ++ LCK Q+ A L ++ G PDV T
Sbjct: 343 LGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 402
Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
+N++++ + + A+ +++ KGC P TY +LI+ +C + + A+ +L M
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCW 343
+ GC+ ++TYN+L++ CK K +A + + + G+ NS+TYNTL+ L SR
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVE 522
Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
DA +++D M P +TYN L+ C+ G + +A + M S C+PDIVTY T+
Sbjct: 523 DAA-QLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581
Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME-NG 462
+ LCK G + A +LL + + YN +I GL +K +A+ L+ +M+E N
Sbjct: 582 ISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNE 641
Query: 463 ISPDDITHRTLIWGFCR-ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
PD +++R + G C + EAVD L E+ ++G S+ ++ GL +
Sbjct: 642 APPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETL 701
Query: 522 IQVLEL-MISSRYKPDD 537
++++ + M +R+ ++
Sbjct: 702 VKLVNMVMQKARFSEEE 718
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 215/415 (51%), Gaps = 1/415 (0%)
Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
PD HF ++ L+ + ++ M + G PD T+N+++ LC+ Q+R AI +
Sbjct: 152 PDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211
Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
L++M G PD T+ T+++ + G A+ + + GC ++ +++ CK
Sbjct: 212 LEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCK 271
Query: 270 QCGIARAIEVLDDMA-IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
+ + A+ + +M+ +G PD T+N+LVN CK G A+ +++ +L G +P+
Sbjct: 272 EGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY 331
Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
TYN+++ L G ++LD M SP TYN LI+ LCK V+ A +
Sbjct: 332 TYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391
Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
SK PD+ T+N+++ LC A++L + C P TYN LID L KG +
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
++A+ + QM +G + IT+ TLI GFC+A++ EA ++ E+ G + Y +
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
I GLCKS++V+ A Q+++ MI KPD +++++ G ++A + Q +
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 185/381 (48%), Gaps = 37/381 (9%)
Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK---------- 269
P+ Y IL + +G F +D C T+ ILIE +
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 270 ------QCGIA-------RAIEVLDD-------------MAIEGCSPDIVTYNSLVNFSC 303
+ G+ R + +L D M++ G PD+ T+N L+ C
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200
Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
+ + A+L++ ++ S G+ P+ T+ T++ G D +I + M E S +
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260
Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKN-CQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
+ N++++G CK G V+ A+N +M +++ PD T+NT++ LCK G + A++++ +
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
+ P + TYN++I GL K G +++A+ + QM+ SP+ +T+ TLI C+ +Q
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
VEEA +L + + +G + +I GLC ++ +A+++ E M S +PD+ ++
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 543 IVKKVADDGMTEEAYKLWQKL 563
++ + G +EA + +++
Sbjct: 441 LIDSLCSKGKLDEALNMLKQM 461
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 140/312 (44%), Gaps = 37/312 (11%)
Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
SP+ Y ++ + G +DD ++ ++ S E + T+ L+ S D +
Sbjct: 80 SPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILS 139
Query: 349 ILDIM----------------------------NEASHS--------PTVFTYNILINGL 372
++D M E SH+ P V T+N+LI L
Sbjct: 140 VVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL 199
Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
C+ + AI M S PD T+ TV+ +EG L+ AL++ + CS
Sbjct: 200 CRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSN 259
Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMM-ENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
++ N ++ G K+G +E A+ +M ++G PD T TL+ G C+A V+ A++++
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
+ + G Y VI GLCK +V A++VL+ MI+ P+ ++T++ + +
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 552 MTEEAYKLWQKL 563
EEA +L + L
Sbjct: 380 QVEEATELARVL 391
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 140/295 (47%), Gaps = 39/295 (13%)
Query: 309 DDAVLVINNLLSR--GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
D A L + NL S+ P Y +L LG G +D + KIL+ M + T+
Sbjct: 63 DSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFL 122
Query: 367 ILINGLCKYGL-------VDRAINSF-------------NQMVSKNC------------- 393
ILI ++ L VD I+ F N +V N
Sbjct: 123 ILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSV 182
Query: 394 ---QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
+PD+ T+N ++ ALC+ L A+ +L + P T+ T++ G ++G ++
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242
Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS-AYRLVI 509
A+ + QM+E G S +++ ++ GFC+ +VE+A++ ++E+ + + + ++
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
+GLCK+ V AI+++++M+ Y PD +++++ + G +EA ++ ++I
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 90/188 (47%), Gaps = 2/188 (1%)
Query: 381 AINSFNQMVSK-NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
A+ FN K N P+ Y +L L + G ++ ++L + S C T+ LI
Sbjct: 66 ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILI 125
Query: 440 DGLAKKGCMEKAMVLYGQMM-ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
+ A+ ++ + + M+ E G+ PD + ++ + ++ ++ G
Sbjct: 126 ESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGI 185
Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
K S + ++I LC++ ++ AI +LE M S PD+ F+T+++ ++G + A +
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR 245
Query: 559 LWQKLIEW 566
+ ++++E+
Sbjct: 246 IREQMVEF 253
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/418 (30%), Positives = 213/418 (50%)
Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
++ +C G+L KLI++M R+ P+ + ++I L RI ++ +A + M+ G
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
+PDT+ Y ++ G CKRG IR+A EM PDV+TY I+ G +A
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
+ + KG P +T+T LI CK + A V + M GCSP++VTY +L++
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
CK+G D A +++ + G++PN TYN++++ L G + K++ A +
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
TY L++ CK G +D+A +M+ K QP IVT+N ++ C GML + +LL+
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
+ +P T+N+L+ + ++ A +Y M G+ PD T+ L+ G C+A
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
++EA L +E+ +G + S Y ++I G K KK A +V + M D +F
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 219/443 (49%)
Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
N ++ C G++ +A L+ +M + PD ++ G R ++K K++++M
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
G P++ Y ++G LC+ ++ A EM G PD + Y T++ G +
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
A F+ + + P ++TYT +I C+ + A ++ +M +G PD VT+ L+N
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
CK G DA V N+++ G PN +TY TL+ L G D+ +++L M + P
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
+FTYN ++NGLCK G ++ A+ + + D VTY T++ A CK G +++A ++L
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
+ G P ++T+N L++G G +E L M+ GI+P+ T +L+ +C
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
+ ++ A + K++ RG Y ++ G CK++ + A + + M + + +
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
S ++K EA +++ ++
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQM 692
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 214/422 (50%), Gaps = 6/422 (1%)
Query: 148 QIPDFHFCINL------IRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
+ P+ C N+ I + ++ RI++A +L +M + G PD I+Y+ +V G C+ G
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295
Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
++ L++ M G +P+ Y +I+ + K +A + + +R+G P + YT
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
LI+ CK+ I A + +M +PD++TY ++++ C+ G +A + + + +
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
G+EP+S+T+ L++ G ++ + M +A SP V TY LI+GLCK G +D A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
++M QP+I TYN+++ LCK G + EA++L+ + + +TY TL+D
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
K G M+KA + +M+ G+ P +T L+ GFC +E+ LL + +G
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
+ + ++ C + A + + M S PD + +VK +EA+ L+Q
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 562 KL 563
++
Sbjct: 656 EM 657
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 147/305 (48%)
Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
D T I+ FC G + +A KL M + PD LI G + ++ A +V
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
M+ +G P+ +TY ++ GLCK G + SA LL EM G +P++ TYN+I+ + +
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
G ++A+ + G +TYT L++ CK + +A E+L +M +G P IVT+
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
N L+N C G +D ++N +L++G+ PN+ T+N+L+ R A I M
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
P TY L+ G CK + A F +M K + TY+ ++ K E
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 416 ALQLL 420
A ++
Sbjct: 685 AREVF 689
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 171/344 (49%), Gaps = 3/344 (0%)
Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC-GIAR 275
G +P V ++ + + D G ++A ++ L G + + + + ++ K C A
Sbjct: 172 GSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 229
Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
AI V + G ++ +YN +++F C+ G+ +A ++ + +G P+ I+Y+T+++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
G D V K++++M P + Y +I LC+ + A +F++M+ + P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
D V Y T++ CK G + A + + ++ +P ++TY +I G + G M +A L+
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
+M G+ PD +T LI G+C+A +++A + + + G Y +I GLCK
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
+D A ++L M +P+ +++IV + G EEA KL
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 133/284 (46%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
+E D T +++ +C G + DA ++ + M + P+ LI GL + ++ A+
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
++L M G P+ TYN +V GLCK G I A+ L+ E +G D +TY T++
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
+G+ +A K+ L KG P ++T+ +L+ C + ++L+ M +G +P+
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
T+NSLV C + A + ++ SRG+ P+ TY L+ +
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656
Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
M S +V TY++LI G K A F+QM + D
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 128/258 (49%), Gaps = 2/258 (0%)
Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
A++V G+ N +YN ++H + G +L +M ++P V +Y+ ++N
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
G C++G +D+ M K +P+ Y +++G LC+ L EA + + P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
+ Y TLIDG K+G + A + +M I+PD +T+ +I GFC+ + EA L
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
E+ +G + + + +I+G CK+ + A +V MI + P+ ++T++ + +
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 551 GMTEEAYKLWQKLIEWKV 568
G + A +L ++ WK+
Sbjct: 470 GDLDSANELLHEM--WKI 485
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 109/257 (42%), Gaps = 4/257 (1%)
Query: 67 IDRVNEVDQDEWSS--ESHVLAVNKKLRGLTITKKSHDPS--LPSSDGPFVENDEKTNNK 122
+D NE+ + W + ++ N + GL + + + + + D T
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
++ +C G++ A +++ M + P L+ G +E K+L M+ G
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
P+ T+N +V C R +++A A+ +M G PD TY +++ K+A
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
+++ KG + TY++LI+ K+ A EV D M EG + D ++ +
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTK 711
Query: 303 CKQGKYDDAVLVINNLL 319
K + D V I+ ++
Sbjct: 712 YKGKRPDTIVDPIDEII 728
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 232 bits (592), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 128/447 (28%), Positives = 232/447 (51%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T N ++ FC R +++ A L+ M + P +L+ G RI A ++ M
Sbjct: 47 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 106
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
V G PDTIT+ ++ GL + A+AL+D M GC+P+++TY ++ + G
Sbjct: 107 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 166
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
A ++ + +I+ +CK + A+ + +M +G P++VTY+SL
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
++ C G++ DA ++++++ + + PN +T+N L+ + G + +K+ D M + S
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286
Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
P +FTYN LING C + +D+A F MVSK+C PD+ TYNT++ CK + + +
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
L ++ +TY TLI GL G + A ++ QM+ +G+ PD +T+ L+ G C
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406
Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
++E+A+++ + K K+ Y +I G+CK+ KVD + + KP+
Sbjct: 407 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466
Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
++T++ + + +EAY L +K+ E
Sbjct: 467 TYNTMISGLCSKRLLQEAYALLKKMKE 493
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 235/457 (51%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T + +L +C +++DA L+D M PD LI GL ++ +A ++ M
Sbjct: 82 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 141
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
V G P+ +TY ++V GLCKRG I A LL++M + E DV+ +NTI+ ++
Sbjct: 142 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 201
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
A+ +K+ KG P ++TY+ LI +C + A ++L DM + +P++VT+N+L
Sbjct: 202 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 261
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
++ K+GK+ +A + ++++ R ++P+ TYN+L++ D ++ + M
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
P + TYN LI G CK V+ F +M + D VTY T++ L +G + A +
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381
Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
+ + P ++TY+ L+DGL G +EKA+ ++ M ++ I D + T+I G C
Sbjct: 382 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 441
Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
+A +V++ DL + +G K Y +I GLC + + A +L+ M PD
Sbjct: 442 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 501
Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
++T+++ DG + +L +++ + +T+
Sbjct: 502 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 538
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 210/421 (49%), Gaps = 6/421 (1%)
Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
M + +P L+ + ++ + + + + M G + TYN+++ C+R Q
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
I A+ALL +M G EP ++T +++L + A+ + G P IT+T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
LI + + A+ ++D M GC P++VTY +VN CK+G D A ++N + +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS---PTVFTYNILINGLCKYGLVD 379
+E + + +NT++ SL + VD L++ E P V TY+ LI+ LC YG
Sbjct: 181 IEADVVIFNTIIDSLCK---YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 237
Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
A + M+ K P++VT+N ++ A KEG EA +L + S P + TYN+LI
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
+G ++KA ++ M+ PD T+ TLI GFC++ +VE+ +L +E+ RG
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
Y +I GL D A +V + M+S PD +S ++ + ++G E+A ++
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417
Query: 560 W 560
+
Sbjct: 418 F 418
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 202/387 (52%)
Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
MV S +P +N ++ + K + I+L ++M G ++ TYN ++ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
A+ ++ G P ++T + L+ C I+ A+ ++D M G PD +T+ +
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
L++ K +AV +++ ++ RG +PN +TY +++ L RG D +L+ M A
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
V +N +I+ LCKY VD A+N F +M +K +P++VTY++++ LC G ++A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
QLL + +P L+T+N LID K+G +A L+ M++ I PD T+ +LI GF
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
C D++++A + + + + Y +I G CKSK+V+ ++ M D
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLI 564
++T+++ + DG + A K++++++
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 160/334 (47%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
+E D N I+ + C + DA L M + P+ +LI L R AS
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
++L M+ P+ +T+N ++ K G+ A L D+M +PD+ TYN+++
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
+ + +A ++ + K C P L TY LI+ CK + E+ +M+ G D
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
VTY +L+ G D+A V ++S G+ P+ +TY+ LL L + G + ++ D
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420
Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
M ++ ++ Y +I G+CK G VD + F + K +P++VTYNT++ LC + +
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 480
Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
L EA LL + P TYNTLI + G
Sbjct: 481 LQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 133/279 (47%)
Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
P I +N L++ K K+D + + + G+ N TYN L++ R +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
L M + + P++ T + L+NG C + A+ +QMV +PD +T+ T++ L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
+EA+ L+ + C P L+TY +++GL K+G ++ A L +M I D +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
T+I C+ V++A++L KE+ +G + Y +I LC + A Q+L MI
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
+ P+ F+ ++ +G EA KL +I+ +
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 86/181 (47%)
Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
MV P I +N +L A+ K + + L + S L TYN LI+ ++
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
+ A+ L G+MM+ G P +T +L+ G+C ++ +AV L+ ++ + G + +
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
+IHGL K A+ +++ M+ +P+ + +V + G + A+ L K+ K
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 568 V 568
+
Sbjct: 181 I 181
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/519 (27%), Positives = 254/519 (48%), Gaps = 42/519 (8%)
Query: 83 HVLAVNKKLRGLTITKKSHDP-----SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDAS 137
+V + N L+GL +S + + G D + ++ F G A
Sbjct: 157 NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAY 216
Query: 138 KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGL 197
M R +PD ++I L + ++KA +VL MV +G +PD +TYN ++ G
Sbjct: 217 STYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 276
Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
C GQ + AI L +M G EPDV+TY+ ++ + NG+ +A + ++G P +
Sbjct: 277 CSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEI 336
Query: 258 ITY-----------------------------------TILIEQVCKQCGIARAIEVLDD 282
TY +ILI KQ + +A+ V
Sbjct: 337 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSK 396
Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
M +G +P+ VTY +++ CK G+ +DA+L ++ G+ P +I YN+L+H L +
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456
Query: 343 WDAVDK-ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
W+ ++ IL++++ T+F +N +I+ CK G V + F MV +P+++TYN
Sbjct: 457 WERAEELILEMLDRGICLNTIF-FNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYN 515
Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
T++ C G ++EA++LL + P +TY+TLI+G K ME A+VL+ +M +
Sbjct: 516 TLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESS 575
Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
G+SPD IT+ ++ G + + A +L I + G ++ S Y +++HGLCK+K D A
Sbjct: 576 GVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDA 635
Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
+Q+ + + K + F+ ++ + G +EA L+
Sbjct: 636 LQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 674
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 229/449 (51%), Gaps = 12/449 (2%)
Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQ----IPD-FHFCINLIRGLIRIDRIEKASKVLQI 177
+L+ C+ + +DA +DI+ RR IP+ F + I L++GL +R ++A ++L +
Sbjct: 128 LLKGLCADKRTSDA---MDIVLRRMTELGCIPNVFSYNI-LLKGLCDENRSQEALELLHM 183
Query: 178 MV---MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
M G PD ++Y ++ G K G A + EM G PDV+TYN+I+ +
Sbjct: 184 MADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCK 243
Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
+A+ ++ G P +TY ++ C AI L M +G PD+VT
Sbjct: 244 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVT 303
Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
Y+ L+++ CK G+ +A + +++ RG++P TY TLL ++G + +LD+M
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363
Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
P + ++ILI K G VD+A+ F++M + P+ VTY V+G LCK G +
Sbjct: 364 RNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423
Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
+A+ + SP I YN+LI GL E+A L +M++ GI + I ++I
Sbjct: 424 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483
Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
C+ +V E+ L + + + G K Y +I+G C + K+D A+++L M+S K
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543
Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
P+ +ST++ E+A L++++
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALVLFKEM 572
Score = 202 bits (514), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 211/411 (51%), Gaps = 4/411 (0%)
Query: 158 LIRGLIRIDRIEKASK-VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS-- 214
L++GL R A VL+ M G +P+ +YN+++ GLC + + A+ LL M+
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADD 187
Query: 215 -VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
G PDV++Y T++ F G +A + + L +G P ++TY +I +CK +
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247
Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
+A+EVL+ M G PD +TYNS+++ C G+ +A+ + + S G+EP+ +TY+ L
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307
Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
+ L G KI D M + P + TY L+ G G + + MV
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
PD ++ ++ A K+G +++A+ + + +P +TY +I L K G +E AM+
Sbjct: 368 HPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427
Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
+ QM++ G+SP +I + +LI G C ++ E A +L+ E+ RG + + +I C
Sbjct: 428 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487
Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
K +V + ++ ELM+ KP+ ++T++ G +EA KL ++
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538
Score = 182 bits (462), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 217/443 (48%), Gaps = 12/443 (2%)
Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI--MVMSGG---VPDTIT 189
DA + D + RR + + L R L + R A+ V + M +G PD T
Sbjct: 33 DARHVFDELLRRGRGASIY---GLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCT 89
Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
Y +++G C+ G++ A L + G D I + +L+ + + + A+ ++
Sbjct: 90 YGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 149
Query: 250 RK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE---GCSPDIVTYNSLVNFSCKQ 305
+ GC P + +Y IL++ +C + A+E+L MA + G PD+V+Y +++N K+
Sbjct: 150 TELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKE 209
Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
G D A + +L RG+ P+ +TYN+++ +L D ++L+ M + P TY
Sbjct: 210 GDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 269
Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
N +++G C G AI +M S +PD+VTY+ ++ LCK G EA ++ +
Sbjct: 270 NSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTK 329
Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
P + TY TL+ G A KG + + L M+ NGI PD LI + + +V++
Sbjct: 330 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQ 389
Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
A+ + ++ ++G Y VI LCKS +V+ A+ E MI P + V+++++
Sbjct: 390 AMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 449
Query: 546 KVADDGMTEEAYKLWQKLIEWKV 568
+ E A +L ++++ +
Sbjct: 450 GLCTCNKWERAEELILEMLDRGI 472
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 217/451 (48%), Gaps = 3/451 (0%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T +LQ + ++G L + L+D+M R PD + LI + ++++A V M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
G P+ +TY ++G LCK G++ A+ ++M G P I YN+++ + K+
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
++A + L +G I + +I+ CK+ + + ++ + M G P+++TYN+L
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
+N C GK D+A+ +++ ++S G++PN++TY+TL++ + + M +
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577
Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
SP + TYNI++ GL + A + ++ Q ++ TYN +L LCK + ++ALQ
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637
Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
+ L T+N +ID L K G ++A L+ NG+ P+ T+R +
Sbjct: 638 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENII 697
Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
+EE L + G + + ++ L + ++ A L MI ++ +
Sbjct: 698 GQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLS-MIDEKHFSLEA 756
Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
+++ + G +E Y+ + ++K F
Sbjct: 757 STASLFIDLLSGGKYQEYYRFLPE--KYKSF 785
Score = 162 bits (411), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 215/462 (46%), Gaps = 3/462 (0%)
Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
SDG VE D T + ++ C G+ +A K+ D M +R P+ L++G
Sbjct: 294 SDG--VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351
Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
+ + +L +MV +G PD +++++ K+G++ A+ + +M G P+ +TY
Sbjct: 352 LVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411
Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
++ + +G+ + A+ +++ + +G P I Y LI +C RA E++ +M G
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471
Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
+ + +NS+++ CK+G+ ++ + ++ G++PN ITYNTL++ G D
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531
Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
K+L M P TY+ LING CK ++ A+ F +M S PDI+TYN +L L
Sbjct: 532 KLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 591
Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
+ A +L + S L TYN ++ GL K + A+ ++ + + +
Sbjct: 592 FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEA 651
Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
T +I + + +EA DL G YRL+ + ++ Q+
Sbjct: 652 RTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLS 711
Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
M + D + + IV+++ G A + +I+ K F
Sbjct: 712 MEDNGCTVDSGMLNFIVRELLQRGEITRA-GTYLSMIDEKHF 752
>sp|A3KPF8|PP131_ARATH Pentatricopeptide repeat-containing protein At1g79080,
chloroplastic OS=Arabidopsis thaliana GN=At1g79080 PE=2
SV=1
Length = 576
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/522 (28%), Positives = 259/522 (49%), Gaps = 50/522 (9%)
Query: 85 LAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMA 144
+ ++ K TIT S P L S G F +D +++ L+D+ ++ +
Sbjct: 51 ITLSPKDSAFTITGSSWKPDLDS--GSF-SDDPRSDEP---------NLSDSFSHLESLV 98
Query: 145 RRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIR 204
P+ L+ L + +R++KA +V+++MV SG +PD Y +V LCKRG +
Sbjct: 99 TGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVG 158
Query: 205 SAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
A+ L+++M G + +TYN ++R + G Q++ F + ++KG P TY+ L+
Sbjct: 159 YAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLL 218
Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
E K+ G A+++LD++ ++G P++V+YN L+ CK+G+ DDA+ + L ++G +
Sbjct: 219 EAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFK 278
Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
N ++YN LL L G W+ + +L M+ +P+V TYNILIN L +G ++A+
Sbjct: 279 ANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQV 338
Query: 385 FNQMVSKNCQPDI--VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN------ 436
+M N Q + +YN V+ LCKEG ++ ++ L + C P TYN
Sbjct: 339 LKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLC 398
Query: 437 -----------------------------TLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
++I L +KG A L +M G PD
Sbjct: 399 EHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDA 458
Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGN-KMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
T+ LI G C A+++L + + N K + +I GLCK ++ D+A++V E
Sbjct: 459 HTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFE 518
Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
+M+ + P++T ++ +V+ +A + E A ++ +L KV
Sbjct: 519 MMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKV 560
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 204/422 (48%), Gaps = 13/422 (3%)
Query: 93 GLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDF 152
+ + +K D PS + T N +++ C G L + + ++ + ++ P+
Sbjct: 160 AMQLVEKMEDHGYPS--------NTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNA 211
Query: 153 HFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDE 212
L+ + ++A K+L +++ GG P+ ++YN+++ G CK G+ A+AL E
Sbjct: 212 FTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRE 271
Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
+ G + +V++YN +LR + +G++++A + P ++TY ILI +
Sbjct: 272 LPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGR 331
Query: 273 IARAIEVLDDMAIEGCSPDIVT---YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
+A++VL +M+ +G VT YN ++ CK+GK D V ++ ++ R +PN T
Sbjct: 332 TEQALQVLKEMS-KGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGT 390
Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
YN + I+ ++ T Y +I LC+ G A +M
Sbjct: 391 YNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMT 450
Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS-SCSPCLITYNTLIDGLAKKGCM 448
PD TY+ ++ LC EGM A+++L ++ S +C P + +N +I GL K
Sbjct: 451 RCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRT 510
Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
+ AM ++ M+E P++ T+ L+ G D++E A ++L E+ R +N+ R+V
Sbjct: 511 DLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAVDRIV 570
Query: 509 IH 510
+
Sbjct: 571 MQ 572
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 241/453 (53%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
+ ++ T + ++ FC R +L A ++ M + P+ +L+ G RI +A
Sbjct: 112 IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
++ M ++G P+T+T+N ++ GL + A+AL+D M GC+PD++TY ++ +
Sbjct: 172 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 231
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
G A + P ++ Y +I+ +CK + A+ + +M +G P++
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
VTY+SL++ C G++ DA ++++++ R + P+ T++ L+ + G +K+ D
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
M + S P++ TY+ LING C + +D A F MVSK+C PD+VTYNT++ CK
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
+ E +++ ++ +TYN LI GL + G + A ++ +M+ +G+ P+ +T+ T
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
L+ G C+ ++E+A+ + + + + + Y ++I G+CK+ KV+ + +
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
KPD ++T++ G EEA L++++ E
Sbjct: 532 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 236/444 (53%), Gaps = 16/444 (3%)
Query: 133 LTDASKLIDIMARRNQ---------------IPDFHFCIN-LIRGLIRIDRIEKASKVLQ 176
+ + SKL+ +A+ N+ IP H+ + LI R ++ A VL
Sbjct: 81 IIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLG 140
Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
M+ G P+ +T + ++ G C +I A+AL+D+M V+G +P+ +T+NT++ +F +
Sbjct: 141 KMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHN 200
Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
K +A+ + KGC P L+TY +++ +CK+ A +L+ M P ++ YN
Sbjct: 201 KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN 260
Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
++++ CK DDA+ + + ++G+ PN +TY++L+ L + G W ++L M E
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320
Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
+P VFT++ LI+ K G + A +++MV ++ P IVTY++++ C L+EA
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380
Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
Q+ + C P ++TYNTLI G K +E+ M ++ +M + G+ + +T+ LI G
Sbjct: 381 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
+A + A ++ KE+ G Y ++ GLCK+ K++ A+ V E + S+ +P
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 537 DTVFSTIVKKVADDGMTEEAYKLW 560
++ +++ + G E+ + L+
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLF 524
Score = 215 bits (548), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 136/474 (28%), Positives = 228/474 (48%), Gaps = 36/474 (7%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T + +L +C ++++A L+D M P+ LI GL ++ +A ++ M
Sbjct: 153 TLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRM 212
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
V G PD +TY ++V GLCKRG A LL++M EP V+ YNTI+ +
Sbjct: 213 VAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM 272
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
A+ +K+ KG P ++TY+ LI +C + A +L DM +PD+ T+++L
Sbjct: 273 DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
++ K+GK +A + + ++ R ++P+ +TY++L++ D ++ + M
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 392
Query: 359 SPTVFTYNILINGLCKY----------------GLV-------------------DRAIN 383
P V TYN LI G CKY GLV D A
Sbjct: 393 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 452
Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
F +MVS P+I+TYNT+L LCK G L +A+ + L S P + TYN +I+G+
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
K G +E L+ + G+ PD + + T+I GFCR EEA L KE+ + G +
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
Y +I + + + ++++ M S + D + +V + DG ++++
Sbjct: 573 CYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 625
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 186/378 (49%)
Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
D T ++ C RG A L++ M + P +I GL + ++ A +
Sbjct: 220 DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 279
Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
+ M G P+ +TY+ ++ LC G+ A LL +M PDV T++ ++
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
GK +A + + +++ P ++TY+ LI C + A ++ + M + C PD+VTY
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399
Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
N+L+ CK + ++ + V + RG+ N++TYN L+ L G D +I M
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
P + TYN L++GLCK G +++A+ F + +P I TYN ++ +CK G + +
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
L L+ P ++ YNT+I G +KG E+A L+ +M E+G P+ + TLI
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579
Query: 476 GFCRADQVEEAVDLLKEI 493
R E + +L+KE+
Sbjct: 580 ARLRDGDREASAELIKEM 597
Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 175/397 (44%), Gaps = 70/397 (17%)
Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
++ A+AL EM S P +I ++ +L + KF I + G P TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
ILI C++ + A+ VL M G P+IVT +SL+N C + +AV +++ +
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
G +PN++ T+N LI+GL + A
Sbjct: 181 GYQPNTV-----------------------------------TFNTLIHGLFLHNKASEA 205
Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
+ ++MV+K CQPD+VTY V+ LCK G + A LL+ + P ++ YNT+IDG
Sbjct: 206 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 265
Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLI--------W------------------ 475
L K M+ A+ L+ +M GI P+ +T+ +LI W
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 476 ---------GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
F + ++ EA L E+ KR Y +I+G C ++D A Q+ E
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
M+S PD ++T++K EE ++++++
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Score = 145 bits (367), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 146/302 (48%), Gaps = 1/302 (0%)
Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
D T + ++ F GKL +A KL D M +R+ P +LI G DR+++A ++
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
+ MV PD +TYN ++ G CK ++ + + EMS G + +TYN +++ +F
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
G A +K+ + G PP ++TY L++ +CK + +A+ V + + P I TY
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504
Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
N ++ CK GK +D + NL +G++P+ + YNT++ +G + D + M E
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
P YN LI + G + + +M S D T V L +G L++
Sbjct: 565 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDK 623
Query: 416 AL 417
+
Sbjct: 624 SF 625
Score = 129 bits (323), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 143/293 (48%)
Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
A+ + +M P I+ ++ L++ K K+D + + + + G+ N TY+ L++
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
R +L M + + P + T + L+NG C + A+ +QM QP
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
+ VT+NT++ L +EA+ L+ + C P L+TY +++GL K+G + A L
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
+M + + P + + T+I G C+ +++A++L KE+ +G + Y +I LC
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
+ A ++L MI + PD FS ++ +G EA KL+ ++++ +
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 229 bits (583), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 124/447 (27%), Positives = 236/447 (52%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T N ++ FC R +++ A L+ M + P +L+ G RI A ++ M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
V G PDTIT+ ++ GL + A+AL+D M GC+P+++TY ++ + G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
A ++ Y+ +I+ +CK A+ + +M +G P+++TY+SL
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
++ C ++ DA ++++++ R + PN +T+N L+ + G +K+ D M + S
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
P +FTY+ LING C + +D A + F M+SK+C P++VTYNT++ CK ++E ++
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
L ++ +TY TLI G + + A +++ QM+ +G+ P+ +T+ TL+ G C
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481
Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
+ ++E+A+ + + + + + Y ++I G+CK+ KV+ + + KPD
Sbjct: 482 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 541
Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
+++T++ G+ EEA L++K+ E
Sbjct: 542 IYNTMISGFCRKGLKEEADALFRKMRE 568
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 210/418 (50%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T + +L +C +++DA L+D M PD LI GL ++ +A ++ M
Sbjct: 157 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
V G P+ +TY ++V GLCKRG I A LL++M + E +V+ Y+T++ ++
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE 276
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
A+ + + KG P +ITY+ LI +C + A +L DM +P++VT+N+L
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
++ K+GK +A + + ++ R ++P+ TY++L++ D + ++M
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
P V TYN LING CK +D + F +M + + VTY T++ + + A
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
+ + P ++TYNTL+DGL K G +EKAMV++ + + + P T+ +I G C
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516
Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
+A +VE+ DL + +G K Y +I G C+ + A + M PD
Sbjct: 517 KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/447 (28%), Positives = 224/447 (50%)
Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
+IL+N KL DA L M + +P L+ + ++ + + + + M
Sbjct: 55 EILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114
Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
G + TYN+++ C+R QI A+ALL +M G EP ++T +++L + A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
+ + G P IT+T LI + + A+ ++D M GC P++VTY +VN
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
CK+G D A ++N + + +E N + Y+T++ SL D + M P
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294
Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
V TY+ LI+ LC Y A + M+ + P++VT+N ++ A KEG L EA +L
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354
Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
+ S P + TY++LI+G +++A ++ M+ P+ +T+ TLI GFC+A
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414
Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
+++E V+L +E+ +RG Y +IHG +++ D A V + M+S P+ ++
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYN 474
Query: 542 TIVKKVADDGMTEEAYKLWQKLIEWKV 568
T++ + +G E+A +++ L K+
Sbjct: 475 TLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 174/352 (49%), Gaps = 2/352 (0%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T ++ C RG + A L++ M + +I L + + A + M
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
G P+ ITY+ ++ LC + A LL +M P+V+T+N ++ GK
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
+A + + +++ P + TY+ LI C + A + + M + C P++VTYN+L
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 406
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEAS 357
+N CK + D+ V + + RG+ N++TY TL+H +R C +A ++++
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466
Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
H P + TYN L++GLCK G +++A+ F + +P I TYN ++ +CK G + +
Sbjct: 467 H-PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 525
Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
L L+ P +I YNT+I G +KG E+A L+ +M E+G PD T
Sbjct: 526 DLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 170/352 (48%), Gaps = 4/352 (1%)
Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
Y ILR + K AIG + ++ P + + L+ + K I + + M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL--GSRGC 342
G S ++ TYN L+N C++ + A+ ++ ++ G EP+ +T ++LL+ G R
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR-I 171
Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
DAV ++D M E + P T+ LI+GL + A+ ++MV + CQP++VTY
Sbjct: 172 SDAV-ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
V+ LCK G ++ A LL+ + + ++ Y+T+ID L K + A+ L+ +M G
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
+ P+ IT+ +LI C ++ +A LL ++ +R + +I K K+ A
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
++ + MI PD +S+++ +EA +++ +I F T
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 402
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 228 bits (581), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 231/439 (52%)
Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
FC KL+ A + + + PD L+ GL R+ +A +++ MV G P
Sbjct: 133 FCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPT 192
Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
IT N +V GLC G++ A+ L+D M +G +P+ +TY +L M +G+ A+ +
Sbjct: 193 LITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLR 252
Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
+ + Y+I+I+ +CK + A + ++M I+G DI+TYN+L+ C G
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG 312
Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
++DD ++ +++ R + PN +T++ L+ S G D++L M + +P TYN
Sbjct: 313 RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYN 372
Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
LI+G CK ++ AI + M+SK C PDI+T+N ++ CK +++ L+L ++
Sbjct: 373 SLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR 432
Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
+TYNTL+ G + G +E A L+ +M+ + PD ++++ L+ G C ++E+A
Sbjct: 433 GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
+++ +I K ++ Y ++IHG+C + KVD A + + K D ++ ++ +
Sbjct: 493 LEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISE 552
Query: 547 VADDGMTEEAYKLWQKLIE 565
+ +A L++K+ E
Sbjct: 553 LCRKDSLSKADILFRKMTE 571
Score = 215 bits (547), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 224/446 (50%), Gaps = 36/446 (8%)
Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
L GL+ I + + A + + M+ S +P I +N + + K Q +AL +M G
Sbjct: 60 LSSGLVGI-KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKG 118
Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
+ T + ++ K A ++ G P + + L+ +C +C ++ A+
Sbjct: 119 IAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEAL 178
Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
E++D M G P ++T N+LVN C GK DAV++I+ ++ G +PN +TY +L+ +
Sbjct: 179 ELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238
Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
G ++L M E + Y+I+I+GLCK G +D A N FN+M K + DI
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298
Query: 398 VTYNTVLGALC-----------------------------------KEGMLNEALQLLHL 422
+TYNT++G C KEG L EA QLL
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
+ +P ITYN+LIDG K+ +E+A+ + M+ G PD +T LI G+C+A++
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
+++ ++L +E+ RG Y ++ G C+S K+++A ++ + M+S R +PD +
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKV 568
++ + D+G E+A +++ K+ + K+
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKM 504
Score = 186 bits (471), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 220/429 (51%), Gaps = 6/429 (1%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T N ++ C GK++DA LID M P+ ++ + + + A ++L+ M
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
D + Y++++ GLCK G + +A L +EM + G + D+ITYNT++ + G++
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
+D +++ P ++T+++LI+ K+ + A ++L +M G +P+ +TYNSL
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
++ CK+ + ++A+ +++ ++S+G +P+ +T+N L++ + +D L++ E S
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCK---ANRIDDGLELFREMSL 431
Query: 359 SPTV---FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
+ TYN L+ G C+ G ++ A F +MVS+ +PDIV+Y +L LC G L +
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
AL++ + S + Y +I G+ ++ A L+ + G+ D + +I
Sbjct: 492 ALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMIS 551
Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
CR D + +A L +++ + G+ Y ++I A +++E M SS +
Sbjct: 552 ELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPA 611
Query: 536 DDTVFSTIV 544
D + ++
Sbjct: 612 DVSTVKMVI 620
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 35/256 (13%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T N ++ FC +L +A +++D+M + PD LI G + +RI+ ++ + M
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
+ G + +T+TYN +V G C+ G++ A L EM PD+++Y +L + DNG+
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGEL 489
Query: 239 KQAIGFW----KDQLRKGCPPYLI-------------------------------TYTIL 263
++A+ + K ++ Y+I Y I+
Sbjct: 490 EKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIM 549
Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
I ++C++ +++A + M EG +PD +TYN L+ A +I + S G
Sbjct: 550 ISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF 609
Query: 324 EPNSITYNTLLHSLGS 339
+ T +++ L S
Sbjct: 610 PADVSTVKMVINMLSS 625
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 226 bits (576), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 131/486 (26%), Positives = 238/486 (48%), Gaps = 35/486 (7%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
+ +D T + + FC R +L+ A ++ M + PD +L+ G RI A
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
++ MV G PDT T+ ++ GL + A+AL+D+M GC+PD++TY T++ +
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
G A+ K + ++ Y +I+ +CK + A+ + +M +G PD+
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
TY+SL++ C G++ DA ++++++ R + PN +T++ L+ + G +K+ D
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
M + S P +FTY+ LING C + +D A + F M+SK+C P++VTY+T++ CK
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 413 LNEALQLLH--------------------LLNGSSCS---------------PCLITYNT 437
+ E ++L C P ++TYN
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
L+DGL K G + KAMV++ + + + PD T+ +I G C+A +VE+ +L + +G
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
AY +I G C+ + A +L+ M P+ ++T+++ DG E +
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA 593
Query: 558 KLWQKL 563
+L +++
Sbjct: 594 ELIKEM 599
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 139/479 (29%), Positives = 230/479 (48%), Gaps = 36/479 (7%)
Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
E D T + +L +C +++DA L+D M PD LI GL ++ +A
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
++ MV G PD +TY +V GLCKRG I A++LL +M E DV+ YNTI+ +
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269
Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
A+ + + KG P + TY+ LI +C + A +L DM +P++V
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329
Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
T+++L++ K+GK +A + + ++ R ++P+ TY++L++ D + ++M
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 354 NEASHSPTVFTYNILINGLCKY----------------GLV------------------- 378
P V TY+ LI G CK GLV
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449
Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
D A F QMVS P+I+TYN +L LCK G L +A+ + L S+ P + TYN +
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
I+G+ K G +E L+ + G+SP+ I + T+I GFCR EEA LLK++ + G
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569
Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
+ Y +I + + + ++++ M S + D + +V + DG ++++
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 627
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 217/432 (50%)
Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
K+ DA L M + P L+ + ++++ E + + M G D TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
+ + C+R Q+ A+A+L +M G EPD++T +++L + + A+ +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
G P T+T LI + + A+ ++D M GC PD+VTY ++VN CK+G D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
+ ++ + +E + + YNT++ L D + M+ P VFTY+ LI+
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
LC YG A + M+ + P++VT++ ++ A KEG L EA +L + S P
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
+ TY++LI+G +++A ++ M+ P+ +T+ TLI GFC+A +VEE ++L +
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
E+ +RG Y +IHG +++ D A V + M+S P+ ++ ++ + +G
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Query: 552 MTEEAYKLWQKL 563
+A +++ L
Sbjct: 483 KLAKAMVVFEYL 494
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 171/357 (47%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
+E D N I+ C + DA L M + PD +LI L R AS
Sbjct: 254 IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 313
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
++L M+ P+ +T++ ++ K G++ A L DEM +PD+ TY++++
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
+ + +A ++ + K C P ++TY+ LI+ CK + +E+ +M+ G +
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
VTY +L++ + D+A +V ++S G+ PN +TYN LL L G + +
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 493
Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
+ ++ P ++TYNI+I G+CK G V+ F + K P+++ YNT++ C++G
Sbjct: 494 LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGS 553
Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
EA LL + P TYNTLI + G E + L +M G + D T
Sbjct: 554 KEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 177/376 (47%), Gaps = 38/376 (10%)
Query: 225 YNTILRT-MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
Y ILR + D K A+ + D ++ P ++ + L+ V K I + + M
Sbjct: 50 YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109
Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGC 342
G S D+ TY+ +N C++ + A+ V+ ++ G EP+ +T ++LL+ S+
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
DAV ++D M E + P FT+ LI+GL + A+ +QMV + CQPD+VTY T
Sbjct: 170 SDAV-ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
V+ LCK G ++ AL LL + ++ YNT+IDGL K M+ A+ L+ +M G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
Query: 463 ISPDDITHRTLI--------W---------------------------GFCRADQVEEAV 487
I PD T+ +LI W F + ++ EA
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
L E+ KR Y +I+G C ++D A + ELMIS P+ +ST++K
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 548 ADDGMTEEAYKLWQKL 563
EE +L++++
Sbjct: 409 CKAKRVEEGMELFREM 424
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 174/376 (46%), Gaps = 8/376 (2%)
Query: 81 ESHVLAVNKKLRGLTITKKSHDPS--LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
E+ V+ N + GL K D D + D T + ++ C+ G+ +DAS+
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
L+ M R P+ LI ++ ++ +A K+ M+ PD TY+ ++ G C
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
++ A + + M C P+V+TY+T+++ + ++ + +++ ++G +
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
TYT LI + A V M G P+I+TYN L++ CK GK A++V L
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
MEP+ TYN ++ + G + ++ ++ SP V YN +I+G C+ G
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554
Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN-----GSSCSPCLI 433
+ A + +M P+ TYNT++ A ++G + +L+ + G + + L+
Sbjct: 555 EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 614
Query: 434 TYNTLIDGLAKKGCME 449
T N L DG K ++
Sbjct: 615 T-NMLHDGRLDKSFLD 629
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 144/293 (49%)
Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
A+++ DM P IV +N L++ K K++ + + + + G+ + TY+ ++
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
R +L M + + P + T + L+NG C + A+ +QMV +P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
D T+ T++ L +EA+ L+ + C P L+TY T+++GL K+G ++ A+ L
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
+M + I D + + T+I G C+ +++A++L E+ +G + Y +I LC
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306
Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
+ A ++L MI + P+ FS ++ +G EA KL+ ++I+ +
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 134/262 (51%)
Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
K DDAV + +++ P+ + +N LL ++ ++ V + + M S ++TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
I IN C+ + A+ +M+ +PDIVT +++L C +++A+ L+ +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
P T+ TLI GL +A+ L QM++ G PD +T+ T++ G C+ ++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
+ LLK++ K + Y +I GLCK K +D A+ + M + +PD +S+++
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 547 VADDGMTEEAYKLWQKLIEWKV 568
+ + G +A +L +IE K+
Sbjct: 303 LCNYGRWSDASRLLSDMIERKI 324
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 226 bits (576), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 136/450 (30%), Positives = 229/450 (50%), Gaps = 7/450 (1%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T NK++ +C G + +A++ + + PDF +LI G + ++ A KV M
Sbjct: 220 TYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM 279
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
+ G + + Y ++ GLC +I A+ L +M C P V TY +++++ + +
Sbjct: 280 PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERK 339
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
+A+ K+ G P + TYT+LI+ +C QC +A E+L M +G P+++TYN+L
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNAL 399
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN---E 355
+N CK+G +DAV V+ + SR + PN+ TYN L+ C V K + ++N E
Sbjct: 400 INGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY----CKSNVHKAMGVLNKMLE 455
Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
P V TYN LI+G C+ G D A + M + PD TY +++ +LCK + E
Sbjct: 456 RKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEE 515
Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
A L L +P ++ Y LIDG K G +++A ++ +M+ P+ +T LI
Sbjct: 516 ACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIH 575
Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
G C +++EA L +++ K G + S ++IH L K D A + M+SS KP
Sbjct: 576 GLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKP 635
Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
D ++T ++ +G +A + K+ E
Sbjct: 636 DAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 238/443 (53%), Gaps = 4/443 (0%)
Query: 124 LQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
L N +R L D K + + +++ P+ + ++ G ++ +E+A++ + +V +G
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG 248
Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
PD TY ++ G C+R + SA + +EM + GC + + Y ++ + + +A+
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM 308
Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
+ C P + TYT+LI+ +C + A+ ++ +M G P+I TY L++
Sbjct: 309 DLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSL 368
Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASHSPT 361
C Q K++ A ++ +L +G+ PN ITYN L++ RG DAVD ++++M SP
Sbjct: 369 CSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVD-VVELMESRKLSPN 427
Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
TYN LI G CK V +A+ N+M+ + PD+VTYN+++ C+ G + A +LL
Sbjct: 428 TRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
L+N P TY ++ID L K +E+A L+ + + G++P+ + + LI G+C+A
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
+V+EA +L+++ + + + +IHGLC K+ A + E M+ +P + +
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606
Query: 542 TIVKKVADDGMTEEAYKLWQKLI 564
++ ++ DG + AY +Q+++
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQML 629
Score = 208 bits (530), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 219/439 (49%), Gaps = 9/439 (2%)
Query: 135 DASKLIDIMARRNQIPDFHF-------CIN-LIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
DA ++D+ + N+ F C N L+ L R +++ +V M+ P+
Sbjct: 158 DALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPN 217
Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
TYN MV G CK G + A + ++ +G +PD TY +++ A +
Sbjct: 218 IYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFN 277
Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
+ KGC + YT LI +C I A+++ M + C P + TY L+ C
Sbjct: 278 EMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSE 337
Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
+ +A+ ++ + G++PN TY L+ SL S+ ++ ++L M E P V TYN
Sbjct: 338 RKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYN 397
Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
LING CK G+++ A++ M S+ P+ TYN ++ CK +++A+ +L+ +
Sbjct: 398 ALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLER 456
Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
P ++TYN+LIDG + G + A L M + G+ PD T+ ++I C++ +VEEA
Sbjct: 457 KVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEA 516
Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
DL + ++G Y +I G CK+ KVD A +LE M+S P+ F+ ++
Sbjct: 517 CDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHG 576
Query: 547 VADDGMTEEAYKLWQKLIE 565
+ DG +EA L +K+++
Sbjct: 577 LCADGKLKEATLLEEKMVK 595
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 211/435 (48%), Gaps = 3/435 (0%)
Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
+E ++ C ++ +A L M P LI+ L +R +A ++
Sbjct: 287 NEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLV 346
Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
+ M +G P+ TY +++ LC + + A LL +M G P+VITYN ++
Sbjct: 347 KEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKR 406
Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
G + A+ + + P TY LI+ CK + +A+ VL+ M PD+VTY
Sbjct: 407 GMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTY 465
Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMN 354
NSL++ C+ G +D A +++ + RG+ P+ TY +++ SL S+ +A D + D +
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD-LFDSLE 524
Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
+ +P V Y LI+G CK G VD A +M+SKNC P+ +T+N ++ LC +G L
Sbjct: 525 QKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLK 584
Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
EA L + P + T LI L K G + A + QM+ +G PD T+ T I
Sbjct: 585 EATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFI 644
Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
+CR ++ +A D++ ++ + G Y +I G + + A VL+ M + +
Sbjct: 645 QTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCE 704
Query: 535 PDDTVFSTIVKKVAD 549
P F +++K + +
Sbjct: 705 PSQHTFLSLIKHLLE 719
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 218/445 (48%), Gaps = 20/445 (4%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T ++ + CS+ K A +L+ M + +P+ LI G + IE A V+++M
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
P+T TYN ++ G CK + A+ +L++M PDV+TYN+++ +G F
Sbjct: 420 ESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
A +G P TYT +I+ +CK + A ++ D + +G +P++V Y +L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
++ CK GK D+A L++ +LS+ PNS+T+N L+H L + G + + M +
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
PTV T ILI+ L K G D A + F QM+S +PD TY T + C+EG L +A
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI---- 474
++ + + SP L TY++LI G G A + +M + G P T +LI
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL 718
Query: 475 ---WGFCRADQVE-----------EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
+G + + E V+LL+++ + +Y +I G+C+ + +
Sbjct: 719 EMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRV 778
Query: 521 AIQVLELMISSR-YKPDDTVFSTIV 544
A +V + M + P + VF+ ++
Sbjct: 779 AEKVFDHMQRNEGISPSELVFNALL 803
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 203/448 (45%), Gaps = 22/448 (4%)
Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
D T N ++ C G A +L+ +M R +PD ++I L + R+E+A +
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 520
Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
+ G P+ + Y ++ G CK G++ A +L++M C P+ +T+N ++ + +
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580
Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
GK K+A + ++ G P + T TILI ++ K A M G PD TY
Sbjct: 581 GKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640
Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
+ + C++G+ DA ++ + G+ P+ TY++L+ G G + +L M +
Sbjct: 641 TTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD 700
Query: 356 ASHSPTVFTYNILINGLC--KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
P+ T+ LI L KYG K +P++ + ++
Sbjct: 701 TGCEPSQHTFLSLIKHLLEMKYG------------KQKGSEPELCAMSNMME-------F 741
Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN-GISPDDITHRT 472
+ ++LL + S +P +Y LI G+ + G + A ++ M N GISP ++
Sbjct: 742 DTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNA 801
Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
L+ C+ + EA ++ ++ G+ + + +++I GL K + + V + ++
Sbjct: 802 LLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCG 861
Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLW 560
Y D+ + I+ V G+ E Y+L+
Sbjct: 862 YYEDELAWKIIIDGVGKQGLVEAFYELF 889
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 71/135 (52%)
Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
YNTL++ LA+ G +++ +Y +M+E+ + P+ T+ ++ G+C+ VEEA + +I
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
+ G Y +I G C+ K +D A +V M + ++ ++ ++ + +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 555 EAYKLWQKLIEWKVF 569
EA L+ K+ + + F
Sbjct: 306 EAMDLFVKMKDDECF 320
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 54/110 (49%)
Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
N +L C K +A+K++D M +P C LI GL + E+ + V Q ++
Sbjct: 800 NALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQ 859
Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
G D + + +++ G+ K+G + + L + M +GC+ TY+ ++
Sbjct: 860 CGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 226 bits (575), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 233/453 (51%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
+E+D T ++ +C + KL A ++ + PD L+ G R+ +A
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
++ MV PD +T + ++ GLC +G++ A+ L+D M G +PD +TY +L +
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
+G A+ ++ + ++ Y+I+I+ +CK A+ + ++M ++G D+
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
VTY+SL+ C GK+DD ++ ++ R + P+ +T++ L+ G ++ +
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
M +P TYN LI+G CK + A F+ MVSK C+PDIVTY+ ++ + CK
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
+++ ++L ++ P ITYNTL+ G + G + A L+ +M+ G+ P +T+
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
L+ G C ++ +A+++ +++ K + Y ++IHG+C + KVD A + +
Sbjct: 461 LLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520
Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
KPD ++ ++ + G EA L++K+ E
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Score = 221 bits (562), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 220/432 (50%)
Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
E D T + ++ FC G++++A L+D M Q PD LI GL R+ +A
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
++ MV G PD +TY ++ LCK G A+ L +M + V+ Y+ ++ ++
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
+G F A+ + + KG ++TY+ LI +C ++L +M PD+V
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
T+++L++ K+GK +A + N +++RG+ P++ITYN+L+ C +++ D+M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
P + TY+ILIN CK VD + F ++ SK P+ +TYNT++ C+ G L
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436
Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
N A +L + P ++TY L+DGL G + KA+ ++ +M ++ ++ + +
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496
Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
I G C A +V++A L + +G K Y ++I GLCK + A + M
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556
Query: 534 KPDDTVFSTIVK 545
PDD ++ +++
Sbjct: 557 TPDDFTYNILIR 568
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/398 (31%), Positives = 201/398 (50%), Gaps = 2/398 (0%)
Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKASKV 174
DE T +L C G A L M RN + + I +I L + + A +
Sbjct: 209 DEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI-VIDSLCKDGSFDDALSL 267
Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
M M G D +TY+ ++GGLC G+ +L EM PDV+T++ ++
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 327
Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
GK +A + + + +G P ITY LI+ CK+ + A ++ D M +GC PDIVT
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387
Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
Y+ L+N CK + DD + + + S+G+ PN+ITYNTL+ G +A ++ M
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
P+V TY IL++GLC G +++A+ F +M I YN ++ +C ++
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 507
Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
+A L L+ P ++TYN +I GL KKG + +A +L+ +M E+G +PDD T+ LI
Sbjct: 508 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
+ +V+L++E+ G +S ++VI L
Sbjct: 568 RAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 217/435 (49%), Gaps = 6/435 (1%)
Query: 132 KLTDASKLIDIMARRNQIP---DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
K+ DA L + M + +P DF+ L + R + + + M ++G D
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFN---RLCSAVARTKQYDLVLGFCKGMELNGIEHDMY 106
Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
T +M+ C++ ++ A ++L G EPD IT++T++ G+ +A+
Sbjct: 107 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 166
Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
+ P L+T + LI +C + ++ A+ ++D M G PD VTY ++N CK G
Sbjct: 167 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226
Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
A+ + + R ++ + + Y+ ++ SL G +D + + M V TY+ L
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
I GLC G D +M+ +N PD+VT++ ++ KEG L EA +L + +
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
+P ITYN+LIDG K+ C+ +A ++ M+ G PD +T+ LI +C+A +V++ +
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406
Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
L +EI +G Y ++ G C+S K++ A ++ + M+S P + ++ +
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466
Query: 549 DDGMTEEAYKLWQKL 563
D+G +A ++++K+
Sbjct: 467 DNGELNKALEIFEKM 481
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 158/333 (47%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
++ D T + ++ C+ GK D +K++ M RN IPD LI ++ ++ +A
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
++ M+ G PDTITYN ++ G CK + A + D M GCEPD++TY+ ++ +
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
+ + +++ KG P ITY L+ C+ + A E+ +M G P +
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
VTY L++ C G+ + A+ + + M YN ++H + + D +
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515
Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
+++ P V TYN++I GLCK G + A F +M C PD TYN ++ A
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575
Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
L +++L+ + S T +ID L+ +
Sbjct: 576 LISSVELIEEMKVCGFSADSSTIKMVIDMLSDR 608
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 156/370 (42%), Gaps = 40/370 (10%)
Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
++Y LR + K AI ++ ++ P I + L V + +
Sbjct: 36 LSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKG 95
Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
M + G D+ T ++N C++ K A V+ G EP++IT++TL++ G
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155
Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
++D M E P + T + LINGLC G V A+ ++MV QPD VTY
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
VL LCK G AL L + + ++ Y+ +ID L K G + A+ L+ +M G
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 463 ISPDDITHRTLIWGFC-----------------------------------RADQVEEAV 487
I D +T+ +LI G C + ++ EA
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV--- 544
+L E+ RG Y +I G CK + A Q+ +LM+S +PD +S ++
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Query: 545 --KKVADDGM 552
K DDGM
Sbjct: 396 CKAKRVDDGM 405
Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 70/154 (45%)
Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
+N+A+ L + S P I +N L +A+ + + M NGI D T
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
+I +CR ++ A +L K G + + +++G C +V A+ +++ M+ +
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
+PD ST++ + G EA L +++E+
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEY 204
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%)
Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
A+ L+ M+++ P I L R Q + + K + G + ++I+
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113
Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
C+ KK+ A VL Y+PD FST+V +G EA L +++E K
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 237/437 (54%), Gaps = 9/437 (2%)
Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
++ +A +L++ M +PD ++I GL + DRI +A+K++ M++ G PD ITY
Sbjct: 267 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG 326
Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
++ GLCK G++ +A L + +P+++ +NT++ +G+ A D +
Sbjct: 327 YLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTS 382
Query: 252 -GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
G P + TY LI K+ + A+EVL DM +GC P++ +Y LV+ CK GK D+
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
A V+N + + G++PN++ +N L+ + +I M P V+T+N LI+
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 502
Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH--LLNGSSC 428
GLC+ + A+ M+S+ + VTYNT++ A + G + EA +L++ + GS
Sbjct: 503 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL 562
Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
ITYN+LI GL + G ++KA L+ +M+ +G +P +I+ LI G CR+ VEEAV+
Sbjct: 563 DE--ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVE 620
Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
KE+ RG+ + +I+GLC++ +++ + + + + PD F+T++ +
Sbjct: 621 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680
Query: 549 DDGMTEEAYKLWQKLIE 565
G +A L + IE
Sbjct: 681 KGGFVYDACLLLDEGIE 697
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 230/442 (52%), Gaps = 5/442 (1%)
Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
+++ FC+ ++ A L+ M + +P+ LI L + +R+ +A ++L+ M + G
Sbjct: 223 VMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 282
Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
VPD T+N ++ GLCK +I A +++ M + G PD ITY ++ + G+ A
Sbjct: 283 CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA- 341
Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE-GCSPDIVTYNSLVNF 301
KD + P ++ + LI + A VL DM G PD+ TYNSL+
Sbjct: 342 ---KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 398
Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
K+G A+ V++++ ++G +PN +Y L+ G D +L+ M+ P
Sbjct: 399 YWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458
Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
+N LI+ CK + A+ F +M K C+PD+ T+N+++ LC+ + AL LL
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 518
Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
+ +TYNTLI+ ++G +++A L +M+ G D+IT+ +LI G CRA
Sbjct: 519 DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAG 578
Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
+V++A L +++ + G+ N + ++I+GLC+S V+ A++ + M+ PD F+
Sbjct: 579 EVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 638
Query: 542 TIVKKVADDGMTEEAYKLWQKL 563
+++ + G E+ +++KL
Sbjct: 639 SLINGLCRAGRIEDGLTMFRKL 660
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 229/430 (53%), Gaps = 6/430 (1%)
Query: 136 ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVG 195
A+ D+++R+ F F + +++ ++ I+ A +L+ M G VP+++ Y ++
Sbjct: 202 ANVFYDMLSRKIPPTLFTFGV-VMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 196 GLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP 255
L K ++ A+ LL+EM + GC PD T+N ++ + + +A L +G P
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 256 YLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
ITY L+ +CK I R ++ D+ P+IV +N+L++ G+ DDA V+
Sbjct: 321 DDITYGYLMNGLCK---IGR-VDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 316 NNLL-SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
++++ S G+ P+ TYN+L++ G ++L M P V++Y IL++G CK
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
G +D A N N+M + +P+ V +N ++ A CKE + EA+++ + C P + T
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
+N+LI GL + ++ A+ L M+ G+ + +T+ TLI F R +++EA L+ E+
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
+G+ + Y +I GLC++ +VD A + E M+ + P + + ++ + GM E
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 555 EAYKLWQKLI 564
EA + ++++
Sbjct: 617 EAVEFQKEMV 626
Score = 202 bits (513), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 212/405 (52%), Gaps = 5/405 (1%)
Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
D+ T ++ C G++ DA+K D+ R + P+ LI G + R++ A VL
Sbjct: 321 DDITYGYLMNGLCKIGRV-DAAK--DLFYRIPK-PEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 176 QIMVMSGG-VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
MV S G VPD TYN ++ G K G + A+ +L +M GC+P+V +Y ++
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
GK +A + G P + + LI CK+ I A+E+ +M +GC PD+ T
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
+NSL++ C+ + A+ ++ +++S G+ N++TYNTL+++ RG K+++ M
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
TYN LI GLC+ G VD+A + F +M+ P ++ N ++ LC+ GM+
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
EA++ + +P ++T+N+LI+GL + G +E + ++ ++ GI PD +T TL+
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
C+ V +A LL E + G + + +++ + + +D
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 194/381 (50%), Gaps = 5/381 (1%)
Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
P +YN+++ L + A + +M P + T+ +++ + A+
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
+D + GC P + Y LI + K + A+++L++M + GC PD T+N ++ CK
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
+ ++A ++N +L RG P+ ITY L++ L G DA + + + P +
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVI 355
Query: 365 YNILINGLCKYGLVDRAINSFNQMV-SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
+N LI+G +G +D A + MV S PD+ TYN+++ KEG++ AL++LH +
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
C P + +Y L+DG K G +++A + +M +G+ P+ + LI FC+ ++
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
EAV++ +E+ ++G K + +I GLC+ ++ A+ +L MIS + ++T+
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 544 VKKVADDGMTEEAYKLWQKLI 564
+ G +EA KL +++
Sbjct: 536 INAFLRRGEIKEARKLVNEMV 556
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 145/261 (55%), Gaps = 2/261 (0%)
Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
N ++ FC ++ +A ++ M R+ PD + +LI GL +D I+ A +L+ M+
Sbjct: 463 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 522
Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
G V +T+TYN ++ +RG+I+ A L++EM G D ITYN++++ + G+ +
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
A ++ LR G P I+ ILI +C+ + A+E +M + G +PDIVT+NSL+N
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 642
Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASHS 359
C+ G+ +D + + L + G+ P+++T+NTL+ L G +DA +LD E
Sbjct: 643 GLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDAC-LLLDEGIEDGFV 701
Query: 360 PTVFTYNILINGLCKYGLVDR 380
P T++IL+ + +DR
Sbjct: 702 PNHRTWSILLQSIIPQETLDR 722
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 117/241 (48%), Gaps = 5/241 (2%)
Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
EP +YN +L L S C + M PT+FT+ +++ C +D A++
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
M C P+ V Y T++ +L K +NEALQLL + C P T+N +I GL
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
K + +A + +M+ G +PDDIT+ L+ G C+ +V+ A DL I K + N+
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNT 358
Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSR-YKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
+IHG ++D A VL M++S PD +++++ +G+ A ++
Sbjct: 359 ----LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 563 L 563
+
Sbjct: 415 M 415
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 108/241 (44%), Gaps = 11/241 (4%)
Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY------GLVDRAI 382
Y L+ LG+ G + +D++L M + VF ++ I+ + Y G R +
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEG---IVFKESLFISIMRDYDKAGFPGQTTRLM 169
Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
+ S C+P +YN VL L A + + + P L T+ ++
Sbjct: 170 LEMRNVYS--CEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAF 227
Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
++ A+ L M ++G P+ + ++TLI + ++V EA+ LL+E+ G
Sbjct: 228 CAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDA 287
Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
+ VI GLCK +++ A +++ M+ + PDD + ++ + G + A L+ +
Sbjct: 288 ETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYR 347
Query: 563 L 563
+
Sbjct: 348 I 348
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%)
Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
+L + N SC P +YN +++ L C + A ++ M+ I P T ++ FC
Sbjct: 169 MLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFC 228
Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
++++ A+ LL+++ K G + Y+ +IH L K +V+ A+Q+LE M PD
Sbjct: 229 AVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE 288
Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLI 564
F+ ++ + EA K+ +++
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRML 314
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 226/439 (51%)
Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
FC KL A + + + P+ LI GL R+ +A +++ MV G PD
Sbjct: 133 FCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPD 192
Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
IT N +V GLC G+ A+ L+D+M GC+P+ +TY +L M +G+ A+ +
Sbjct: 193 LITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLR 252
Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
+ + Y+I+I+ +CK + A + ++M ++G + +I+TYN L+ C G
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAG 312
Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
++DD ++ +++ R + PN +T++ L+ S G +++ M +P TY
Sbjct: 313 RWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYT 372
Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
LI+G CK +D+A + MVSK C P+I T+N ++ CK +++ L+L ++
Sbjct: 373 SLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR 432
Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
+TYNTLI G + G + A L+ +M+ + P+ +T++ L+ G C + E+A
Sbjct: 433 GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKA 492
Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
+++ ++I K ++ Y ++IHG+C + KVD A + + KP ++ ++
Sbjct: 493 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGG 552
Query: 547 VADDGMTEEAYKLWQKLIE 565
+ G EA L++K+ E
Sbjct: 553 LCKKGPLSEAELLFRKMEE 571
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/450 (27%), Positives = 223/450 (49%)
Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
E + T + ++ C G++++A +L+D M PD L+ GL + +A
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
++ MV G P+ +TY ++ +CK GQ A+ LL +M + D + Y+ I+ +
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
+G A + + KG +ITY ILI C ++L DM +P++V
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
T++ L++ K+GK +A + ++ RG+ P++ITY +L+ D ++++D+M
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
P + T+NILING CK +D + F +M + D VTYNT++ C+ G L
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
N A +L + P ++TY L+DGL G EKA+ ++ ++ ++ + D + +
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
I G C A +V++A DL + +G K Y ++I GLCK + A + M +
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 574
Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
PD ++ +++ DG ++ KL ++L
Sbjct: 575 APDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Score = 200 bits (508), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 219/408 (53%), Gaps = 1/408 (0%)
Query: 161 GLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP 220
GL+ I + + A + + M+ S +P I ++ + + K Q +AL +M + G
Sbjct: 63 GLVDI-KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAH 121
Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
++ T + ++ K A ++ G P IT++ LI +C + ++ A+E++
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181
Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
D M G PD++T N+LVN C GK +A+L+I+ ++ G +PN++TY +L+ +
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS 241
Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
G ++L M E + Y+I+I+GLCK+G +D A N FN+M K +I+TY
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301
Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
N ++G C G ++ +LL + +P ++T++ LID K+G + +A L+ +M+
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
GI+PD IT+ +LI GFC+ + +++A ++ + +G + ++I+G CK+ ++D
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
+++ M D ++T+++ + G A +L+Q+++ KV
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 469
Score = 196 bits (498), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 203/395 (51%), Gaps = 2/395 (0%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
T +L C G+ A +L+ M RN ++ + I +I GL + ++ A +
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI-IIDGLCKHGSLDNAFNLFNE 288
Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
M M G + ITYN+++GG C G+ LL +M P+V+T++ ++ + GK
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
++A K+ + +G P ITYT LI+ CK+ + +A +++D M +GC P+I T+N
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
L+N CK + DD + + + RG+ +++TYNTL+ G + ++ M
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
P + TY IL++GLC G ++A+ F ++ + DI YN ++ +C +++A
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 528
Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
L L P + TYN +I GL KKG + +A +L+ +M E+G +PD T+ LI
Sbjct: 529 DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAH 588
Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
++V L++E+ + G + S ++VI L
Sbjct: 589 LGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 218/437 (49%)
Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
K DA L M +P L + + + + + + M + G + T +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
+M+ C+ ++ A + + ++ G EP+ IT++T++ + G+ +A+ +
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
G P LIT L+ +C A A+ ++D M GC P+ VTY ++N CK G+ A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
+ ++ + R ++ +++ Y+ ++ L G D + + M + + TYNILI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
C G D M+ + P++VT++ ++ + KEG L EA +L + +P
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
ITY +LIDG K+ ++KA + M+ G P+ T LI G+C+A+++++ ++L +
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
++ RG Y +I G C+ K+++A ++ + M+S + P+ + ++ + D+G
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Query: 552 MTEEAYKLWQKLIEWKV 568
+E+A ++++K+ + K+
Sbjct: 488 ESEKALEIFEKIEKSKM 504
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 177/376 (47%), Gaps = 35/376 (9%)
Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
++Y LR+ + K AI ++D + P +I ++ L + K + +
Sbjct: 54 LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113
Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
M ++G + ++ T + ++N C+ K A + ++ G EPN+IT++TL++ L G
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
+++D M E H P + T N L+NGLC G A+ ++MV CQP+ VTY
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
VL +CK G A++LL + + + Y+ +IDGL K G ++ A L+ +M G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG------------------NKMRNS- 503
I+ + IT+ LI GFC A + ++ LL+++ KR K+R +
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 504 ----------------AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
Y +I G CK +D A Q+++LM+S P+ F+ ++
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413
Query: 548 ADDGMTEEAYKLWQKL 563
++ +L++K+
Sbjct: 414 CKANRIDDGLELFRKM 429
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 130/275 (47%), Gaps = 4/275 (1%)
Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
D T ++ FC L A++++D+M + P+ LI G + +RI+ ++
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
+ M + G V DT+TYN ++ G C+ G++ A L EM P+++TY +L + DN
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
G+ ++A+ ++ + + Y I+I +C + A ++ + ++G P + TY
Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 546
Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
N ++ CK+G +A L+ + G P+ TYN L+ + G K+++ +
Sbjct: 547 NIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606
Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
S T ++I+ L R SF M+S
Sbjct: 607 CGFSVDASTIKMVIDMLSD----GRLKKSFLDMLS 637
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 118/262 (45%), Gaps = 14/262 (5%)
Query: 76 DEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTD 135
D + E+H+ N+ + + K DP++ +T N ++ +C ++ D
Sbjct: 376 DGFCKENHLDKANQMVD--LMVSKGCDPNI------------RTFNILINGYCKANRIDD 421
Query: 136 ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVG 195
+L M+ R + D LI+G + ++ A ++ Q MV P+ +TY +++
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 196 GLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP 255
GLC G+ A+ + +++ S E D+ YN I+ M + K A + KG P
Sbjct: 482 GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 541
Query: 256 YLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
+ TY I+I +CK+ ++ A + M +G +PD TYN L+ G +V +I
Sbjct: 542 GVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLI 601
Query: 316 NNLLSRGMEPNSITYNTLLHSL 337
L G ++ T ++ L
Sbjct: 602 EELKRCGFSVDASTIKMVIDML 623
Score = 39.3 bits (90), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 1/130 (0%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
+E D N I+ C+ K+ DA L + + P +I GL + + +A
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
+ + M G PD TYN+++ G ++ L++E+ G D T ++ M
Sbjct: 564 LLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI-DM 622
Query: 233 FDNGKFKQAI 242
+G+ K++
Sbjct: 623 LSDGRLKKSF 632
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 216 bits (549), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 231/444 (52%), Gaps = 1/444 (0%)
Query: 123 ILQNFCSR-GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
I+ N C R KL+ A + + + PD LI GL R+ +A +++ MV
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
G P IT N +V GLC G++ A+ L+D M +G +P+ +TY +L+ M +G+ A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
+ + + + Y+I+I+ +CK + A + ++M I+G DI+ Y +L+
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
C G++DD ++ +++ R + P+ + ++ L+ G +++ M + SP
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
TY LI+G CK +D+A + + MVSK C P+I T+N ++ CK ++++ L+L
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411
Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
++ +TYNTLI G + G +E A L+ +M+ + PD ++++ L+ G C
Sbjct: 412 KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNG 471
Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
+ E+A+++ ++I K ++ Y ++IHG+C + KVD A + + KPD ++
Sbjct: 472 EPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYN 531
Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
++ + G EA L++K+ E
Sbjct: 532 IMIGGLCKKGSLSEADLLFRKMEE 555
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 221/450 (49%)
Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
E D T + ++ C G++++A +L+D M P L+ GL ++ A
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
++ MV +G P+ +TY ++ +CK GQ A+ LL +M + D + Y+ I+ +
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
+G A + + KG +I YT LI C ++L DM +PD+V
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
+++L++ K+GK +A + ++ RG+ P+++TY +L+ D + +LD+M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
P + T+NILING CK L+D + F +M + D VTYNT++ C+ G L
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
A +L + P +++Y L+DGL G EKA+ ++ ++ ++ + D + +
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
I G C A +V++A DL + +G K Y ++I GLCK + A + M +
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
P+ ++ +++ +G ++ KL +++
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 206/400 (51%)
Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
+ A + Q M S P I ++ + + + Q + L +M + G ++ T + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
+ K A ++ G P +T++ LI +C + ++ A+E++D M G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
P ++T N+LVN C GK DAVL+I+ ++ G +PN +TY +L + G +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
+L M E Y+I+I+GLCK G +D A N FN+M K + DI+ Y T++ C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
G ++ +LL + +P ++ ++ LID K+G + +A L+ +M++ GISPD +
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
T+ +LI GFC+ +Q+++A +L + +G + ++I+G CK+ +D +++ M
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
D ++T+++ + G E A +L+Q+++ +V
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 212/440 (48%), Gaps = 6/440 (1%)
Query: 77 EWSSESHVLAVNKKLRGLTITKKSHDPSL---PSSDGPFVENDEKTNNKILQNFCSRGKL 133
E + ++ +N + GL + K D L + F N E T +L+ C G+
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN-EVTYGPVLKVMCKSGQT 228
Query: 134 TDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
A +L+ M R ++ + I +I GL + ++ A + M + G D I Y
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSI-IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
++ G C G+ LL +M PDV+ ++ ++ GK ++A K+ +++G
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
P +TYT LI+ CK+ + +A +LD M +GC P+I T+N L+N CK DD +
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407
Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
+ + RG+ +++TYNTL+ G + ++ M P + +Y IL++GL
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
C G ++A+ F ++ + DI YN ++ +C +++A L L P +
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527
Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
TYN +I GL KKG + +A +L+ +M E+G SP+ T+ LI ++ L++E
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587
Query: 493 IGKRGNKMRNSAYRLVIHGL 512
I + G + S ++V+ L
Sbjct: 588 IKRCGFSVDASTVKMVVDML 607
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 210/431 (48%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T N ++ C GK++DA LID M P+ +++ + + + A ++L+ M
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
D + Y++++ GLCK G + +A L +EM + G + D+I Y T++R G++
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
+D +++ P ++ ++ LI+ K+ + A E+ +M G SPD VTY SL
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
++ CK+ + D A +++ ++S+G PN T+N L++ D ++ M+
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
TYN LI G C+ G ++ A F +MVS+ +PDIV+Y +L LC G +AL+
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
+ + S + YN +I G+ ++ A L+ + G+ PD T+ +I G C
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538
Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
+ + EA L +++ + G+ Y ++I + +++E + + D +
Sbjct: 539 KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAS 598
Query: 539 VFSTIVKKVAD 549
+V ++D
Sbjct: 599 TVKMVVDMLSD 609
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 213/439 (48%), Gaps = 19/439 (4%)
Query: 130 RGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTIT 189
R +L D S+L ++AR Q + ++L + M + G + T
Sbjct: 69 RPRLIDFSRLFSVVARTKQ---YDLVLDLCKQ----------------MELKGIAHNLYT 109
Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
++M+ C+ ++ A + + ++ G EPD +T++T++ + G+ +A+ +
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169
Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
G P LIT L+ +C ++ A+ ++D M G P+ VTY ++ CK G+
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
A+ ++ + R ++ +++ Y+ ++ L G D + + M + Y LI
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
G C G D M+ + PD+V ++ ++ KEG L EA +L + S
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
P +TY +LIDG K+ ++KA + M+ G P+ T LI G+C+A+ +++ ++L
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
+++ RG Y +I G C+ K+++A ++ + M+S R +PD + ++ + D
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 550 DGMTEEAYKLWQKLIEWKV 568
+G E+A ++++K+ + K+
Sbjct: 470 NGEPEKALEIFEKIEKSKM 488
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 175/376 (46%), Gaps = 35/376 (9%)
Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
++Y LR+ + K A+ +++ R P LI ++ L V + +++
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97
Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
M ++G + ++ T + ++N C+ K A + ++ G EP+++T++TL++ L G
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
+++D M E H PT+ T N L+NGLC G V A+ ++MV QP+ VTY
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
VL +CK G A++LL + + Y+ +IDGL K G ++ A L+ +M G
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 463 ISPDDITHRTLIWGFCRA-----------------------------------DQVEEAV 487
D I + TLI GFC A ++ EA
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337
Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
+L KE+ +RG Y +I G CK ++D A +L+LM+S P+ F+ ++
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
Query: 548 ADDGMTEEAYKLWQKL 563
+ ++ +L++K+
Sbjct: 398 CKANLIDDGLELFRKM 413
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 142/276 (51%)
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
V+Y + K DDAV + + P I ++ L + +D V +
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97
Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
M + ++T +I+IN C+ + A ++ +++ +PD VT++T++ LC EG
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
++EAL+L+ + P LIT N L++GL G + A++L +M+E G P+++T+
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
++ C++ Q A++LL+++ +R K+ Y ++I GLCK +D A + M
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
+K D +++T+++ G ++ KL + +I+ K+
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 216 bits (549), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 139/460 (30%), Positives = 225/460 (48%), Gaps = 34/460 (7%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPD--------------------------F 152
T N +L+ C K+ A KL+ M+ + PD F
Sbjct: 183 TYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF 242
Query: 153 HFCIN----LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
++ LI GL + + A ++++ MV G P+ I+Y+ ++ LC GQI A +
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302
Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK-GCPPYLITYTILIEQV 267
L +M GC P++ T +++++ F G A+ W +R G P ++ Y L++
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362
Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
C I +A+ V M GCSP+I TY SL+N K+G D AV + N +L+ G PN
Sbjct: 363 CSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNV 422
Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
+ Y ++ +L + + +++IM++ + +P+V T+N I GLC G +D A F Q
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Query: 388 MVSKN-CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
M ++ C P+IVTYN +L L K + EA L + TYNTL+ G G
Sbjct: 483 MEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAG 542
Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI--GKRGNKMRNSA 504
A+ L G+MM +G SPD+IT +I +C+ + E A +L + G+R + +
Sbjct: 543 LPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVIS 602
Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
Y VI GLC+S + + +LE MIS+ P +S ++
Sbjct: 603 YTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
Score = 209 bits (532), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 223/459 (48%), Gaps = 35/459 (7%)
Query: 136 ASKLIDIMARRNQI---PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
A + +++ R + P +++ L+ +RI+ V + M G P+ TYN+
Sbjct: 127 AERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNV 186
Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG---------------- 236
++ LCK ++ A LL EMS GC PD ++Y T++ +M + G
Sbjct: 187 LLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVV 246
Query: 237 --------------KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
+K A ++ + KG P +I+Y+ LI +C I A L
Sbjct: 247 SVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306
Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL-SRGMEPNSITYNTLLHSLGSRG 341
M GC P+I T +SLV +G DA+ + N ++ G++PN + YNTL+ S G
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 366
Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
+ M E SP + TY LING K G +D A+ +N+M++ C P++V Y
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYT 426
Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM-ME 460
++ ALC+ EA L+ +++ +C+P + T+N I GL G ++ A ++ QM +
Sbjct: 427 NMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ 486
Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
+ P+ +T+ L+ G +A+++EEA L +EI RG + +S Y ++HG C + +
Sbjct: 487 HRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGI 546
Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
A+Q++ M+ PD+ + I+ G E A ++
Sbjct: 547 ALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQM 585
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 212/445 (47%), Gaps = 36/445 (8%)
Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
+IR L +++ +LQ M + G + ++ + G A+ + + G
Sbjct: 82 MIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFG 141
Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
C+P V YN +L T+ + + ++D R G P + TY +L++ +CK + A
Sbjct: 142 CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAK 201
Query: 278 EVLDDMAIEGCSPDIVT------------------------------YNSLVNFSCKQGK 307
++L +M+ +GC PD V+ YN+L+N CK+
Sbjct: 202 KLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHD 261
Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
Y A ++ ++ +G+ PN I+Y+TL++ L + G + L M + P ++T +
Sbjct: 262 YKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSS 321
Query: 368 LINGLCKYGLVDRAINSFNQMVSK-NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
L+ G G A++ +NQM+ QP++V YNT++ C G + +A+ + +
Sbjct: 322 LVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEI 381
Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
CSP + TY +LI+G AK+G ++ A+ ++ +M+ +G P+ + + ++ CR + +EA
Sbjct: 382 GCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEA 441
Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS-RYKPDDTVFSTIVK 545
L++ + K + I GLC + ++D A +V M R P+ ++ ++
Sbjct: 442 ESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLD 501
Query: 546 KVADDGMTEEAYKLWQKL----IEW 566
+A EEAY L +++ +EW
Sbjct: 502 GLAKANRIEEAYGLTREIFMRGVEW 526
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 169/368 (45%), Gaps = 18/368 (4%)
Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGV-P 185
C+ G++ A + M +R P+ + +L++G A + M+ G+ P
Sbjct: 291 LCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQP 350
Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
+ + YN +V G C G I A+++ M GC P++ TY +++ G A+ W
Sbjct: 351 NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIW 410
Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
L GC P ++ YT ++E +C+ A +++ M+ E C+P + T+N+ + C
Sbjct: 411 NKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDA 470
Query: 306 GKYDDAVLVINNLLSRGM-EPNSITYNTLLHSLGSRG----CWDAVDKILDIMNEASHSP 360
G+ D A V + + PN +TYN LL L + +I E S S
Sbjct: 471 GRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSS- 529
Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
TYN L++G C GL A+ +M+ PD +T N ++ A CK+G A Q+L
Sbjct: 530 ---TYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML 586
Query: 421 HLLNGSSCS-----PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
L+ SC P +I+Y +I GL + C E ++L +M+ GI P T LI
Sbjct: 587 DLV---SCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Query: 476 GFCRADQV 483
F D V
Sbjct: 644 CFILDDIV 651
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 179/375 (47%), Gaps = 10/375 (2%)
Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSG--CEPDVITYNTILRTMFDNGKFKQAIGFW 245
+T+ +M+ L GQ+ S LL +M + G C D+ + +++ G ++A+ +
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDL--FISVISVYRQVGLAERAVEMF 134
Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
GC P + Y +++ + + I V DM +G P++ TYN L+ CK
Sbjct: 135 YRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKN 194
Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
K D A ++ + ++G P++++Y T++ S+ G ++ + P V Y
Sbjct: 195 NKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAE-----RFEPVVSVY 249
Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
N LINGLCK A +MV K P++++Y+T++ LC G + A L +
Sbjct: 250 NALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLK 309
Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN-GISPDDITHRTLIWGFCRADQVE 484
C P + T ++L+ G +G A+ L+ QM+ G+ P+ + + TL+ GFC +
Sbjct: 310 RGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIV 369
Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
+AV + + + G Y +I+G K +D A+ + M++S P+ V++ +V
Sbjct: 370 KAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMV 429
Query: 545 KKVADDGMTEEAYKL 559
+ + +EA L
Sbjct: 430 EALCRHSKFKEAESL 444
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 160/366 (43%), Gaps = 52/366 (14%)
Query: 241 AIGFWKD----QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG--CSPDIVT 294
A+ F+K L K P +T+ ++I ++ + +L M ++G CS D+
Sbjct: 59 ALHFFKSIANSNLFKHTP---LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDL-- 113
Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
+ S+++ + G + AV + + G +P+ YN +L +L + + M
Sbjct: 114 FISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMK 173
Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
P VFTYN+L+ LCK VD A +M +K C PD V+Y TV+ ++C+ G++
Sbjct: 174 RDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVK 233
Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
E +L P + YN LI+GL K+ + A L +M+E GISP+ I++ TLI
Sbjct: 234 EGREL-----AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLI 288
Query: 475 WGFCRADQVEEAVDLLKEIGKRG----------------------------NKMRNS--- 503
C + Q+E A L ++ KRG N+M
Sbjct: 289 NVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGL 348
Query: 504 -----AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
AY ++ G C + A+ V M P+ + +++ A G + A
Sbjct: 349 QPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVY 408
Query: 559 LWQKLI 564
+W K++
Sbjct: 409 IWNKML 414
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 3/216 (1%)
Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
+++ C K +A LI+IM++ N P I+GL R++ A KV + M
Sbjct: 428 MVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQH 487
Query: 183 GVP-DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
P + +TYN ++ GL K +I A L E+ + G E TYNT+L + G A
Sbjct: 488 RCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIA 547
Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI--EGCSPDIVTYNSLV 299
+ + G P IT ++I CKQ RA ++LD ++ PD+++Y +++
Sbjct: 548 LQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVI 607
Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
C+ +D V+++ ++S G+ P+ T++ L++
Sbjct: 608 WGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 124/283 (43%), Gaps = 16/283 (5%)
Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD- 344
EGCS + L+ F L +N+LL+ I ++ L C
Sbjct: 5 EGCSLLLKVQKPLIPFVLNTN------LNVNHLLTESPNHAEIKELDVVKRLRQESCVPL 58
Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK--NCQPDIVTYNT 402
A+ I N T T+ ++I L G VD QM + +C D+ + +
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDL--FIS 116
Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
V+ + G+ A+++ + + C P + YN ++D L + ++ ++Y M +G
Sbjct: 117 VISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG 176
Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
P+ T+ L+ C+ ++V+ A LL E+ +G +Y VI +C+ V
Sbjct: 177 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGR 236
Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
++ E R++P +V++ ++ + + + A++L ++++E
Sbjct: 237 ELAE-----RFEPVVSVYNALINGLCKEHDYKGAFELMREMVE 274
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 31/188 (16%)
Query: 20 LQWCS---RQVSLQHGVVNNHRTQFYSQLRDLGAGRNVSLKCRGLPGNVCIDRVNEVDQD 76
L W RQ+ QH N T Y++L D A N + GL + + V
Sbjct: 473 LDWAEKVFRQMEQQHRCPPNIVT--YNELLDGLAKANRIEEAYGLTREIFMRGV------ 524
Query: 77 EWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFV--------ENDEKTNNKILQNFC 128
EWSS ++ N L G S + LP V DE T N I+ +C
Sbjct: 525 EWSSSTY----NTLLHG------SCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYC 574
Query: 129 SRGKLTDASKLIDIMA--RRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
+GK A++++D+++ RR PD N+I GL R + E +L+ M+ +G VP
Sbjct: 575 KQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPS 634
Query: 187 TITYNMMV 194
T+++++
Sbjct: 635 IATWSVLI 642
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 227/458 (49%), Gaps = 19/458 (4%)
Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
N +++ FC KL+ + + + PD L+ GL DRI +A + MV
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 181 SGGV---------------PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
+G + P IT+N ++ GLC G++ A AL+++M G DV+TY
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
TI+ M G K A+ P ++ Y+ +I+++CK + A + +M
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
+G +P++ TYN +++ C G++ DA ++ +++ R + P+ +T+N L+ + G
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
+K+ D M P TYN +I G CK+ D A + F+ M S PD+VT+NT++
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIID 440
Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
C+ ++E +QLL ++ TYNTLI G + + A L+ +M+ +G+ P
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
D IT L++GFC +++EEA++L + I + AY ++IHG+CK KVD A +
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
+ +PD ++ ++ +A L+ K+
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM 598
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 222/459 (48%), Gaps = 42/459 (9%)
Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
+A L D M P LI GL R+ +A+ ++ MV G D +TY +V
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
G+CK G +SA+ LL +M + +PDV+ Y+ I+ + +G A + + L KG
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
P + TY +I+ C + A +L DM +PD++T+N+L++ S K+GK +A +
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF----------- 363
+ +L R + P+++TYN++++ +D + D+M AS F
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM--ASPDVVTFNTIIDVYCRAK 446
Query: 364 ----------------------TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
TYN LI+G C+ ++ A + F +M+S PD +T N
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506
Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
+L C+ L EAL+L ++ S + YN +I G+ K +++A L+ + +
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
G+ PD T+ +I GFC + +A L ++ G++ NS Y +I G K+ ++D +
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626
Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVAD---DGMTEEAY 557
I+++ M S+ + D + +K VAD DG ++++
Sbjct: 627 IELISEMRSNGFSGD----AFTIKMVADLITDGRLDKSF 661
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 180/392 (45%), Gaps = 6/392 (1%)
Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
D T I+ C G A L+ M + PD +I L + A +
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
M+ G P+ TYN M+ G C G+ A LL +M PDV+T+N ++
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
GK +A + L + P +TY +I CK A + D MA SPD+VT+
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTF 435
Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
N++++ C+ + D+ + ++ + RG+ N+ TYNTL+H +A + M
Sbjct: 436 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 495
Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
P T NIL+ G C+ ++ A+ F + D V YN ++ +CK ++E
Sbjct: 496 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555
Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
A L L P + TYN +I G K + A VL+ +M +NG PD+ T+ TLI
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615
Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
G +A +++++++L+ E+ R N A+ +
Sbjct: 616 GCLKAGEIDKSIELISEM--RSNGFSGDAFTI 645
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 217/460 (47%), Gaps = 51/460 (11%)
Query: 133 LTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
L DA D M R C +I +R++R + A + + M + + ++N+
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
++ C ++ +++ +++ G +PDV+T+NT+L + + +A+ +
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF------- 199
Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
Y++ + G A+ + D M G +P ++T+N+L+N C +G+ +A
Sbjct: 200 --GYMV-----------ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 246
Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
++N ++ +G+ + +TY T+++ + G + +L M E P V Y+ +I+ L
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306
Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
CK G A F++M+ K P++ TYN ++ C G ++A +LL + +P +
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366
Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF--------------- 477
+T+N LI K+G + +A L +M+ I PD +T+ ++I+GF
Sbjct: 367 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDL 426
Query: 478 ----------------CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
CRA +V+E + LL+EI +RG + Y +IHG C+ ++ A
Sbjct: 427 MASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486
Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
+ + MIS PD + ++ ++ EEA +L++
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 138/303 (45%), Gaps = 5/303 (1%)
Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
D T N ++ GKL +A KL D M R PD ++I G + +R + A +
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
+M PD +T+N ++ C+ ++ + LL E+S G + TYNT++ +
Sbjct: 425 DLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
A +++ + G P IT IL+ C+ + A+E+ + + + D V Y
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
N +++ CK K D+A + +L G+EP+ TYN ++ + + + M +
Sbjct: 541 NIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 600
Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
H P TYN LI G K G +D++I ++M S D T V L +G L++
Sbjct: 601 NGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV-ADLITDGRLDK 659
Query: 416 ALQ 418
+
Sbjct: 660 SFS 662
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 139/299 (46%), Gaps = 20/299 (6%)
Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
AI + M I +I ++N L+ C K ++ L G +P+ +T+NTLLH
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
L C + D+I S + +F Y + + G ++ A+ F+QMV P
Sbjct: 185 GL----CLE--DRI-------SEALALFGY------MVETGFLE-AVALFDQMVEIGLTP 224
Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
++T+NT++ LC EG + EA L++ + G ++TY T+++G+ K G + A+ L
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284
Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
+M E I PD + + +I C+ +A L E+ ++G Y +I G C
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
+ A ++L MI PD F+ ++ +G EA KL +++ +F T
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 229/433 (52%)
Query: 136 ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVG 195
A +L + M PD + +IR L + + +A +++ M +G + + YN+++
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 196 GLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP 255
GLCK+ ++ A+ + +++ +PDV+TY T++ + +F+ + + L P
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330
Query: 256 YLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
+ L+E + K+ I A+ ++ + G SP++ YN+L++ CK K+ +A L+
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390
Query: 316 NNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
+ + G+ PN +TY+ L+ RG D L M + +V+ YN LING CK+
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKF 450
Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
G + A +M++K +P +VTY +++G C +G +N+AL+L H + G +P + T+
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510
Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
TL+ GL + G + A+ L+ +M E + P+ +T+ +I G+C + +A + LKE+ +
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE 570
Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
+G +YR +IHGLC + + A ++ + + ++ ++ ++ +G EE
Sbjct: 571 KGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEE 630
Query: 556 AYKLWQKLIEWKV 568
A + Q++++ V
Sbjct: 631 ALSVCQEMVQRGV 643
Score = 202 bits (515), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 224/444 (50%)
Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
N ++ C + K+ +A + +A ++ PD L+ GL ++ E +++ M+
Sbjct: 266 NVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLC 325
Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
P + +V GL KRG+I A+ L+ + G P++ YN ++ ++ KF +
Sbjct: 326 LRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHE 385
Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
A + + G P +TY+ILI+ C++ + A+ L +M G + YNSL+N
Sbjct: 386 AELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLIN 445
Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
CK G A + ++++ +EP +TY +L+ S+G + ++ M +P
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAP 505
Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
+++T+ L++GL + GL+ A+ FN+M N +P+ VTYN ++ C+EG +++A + L
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFL 565
Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
+ P +Y LI GL G +A V + + ++I + L+ GFCR
Sbjct: 566 KEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCRE 625
Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
++EEA+ + +E+ +RG + Y ++I G K K + +L+ M KPDD ++
Sbjct: 626 GKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIY 685
Query: 541 STIVKKVADDGMTEEAYKLWQKLI 564
++++ + G +EA+ +W +I
Sbjct: 686 TSMIDAKSKTGDFKEAFGIWDLMI 709
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 210/427 (49%), Gaps = 6/427 (1%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T ++ +CS+GK+ A +L M + P + L+ GL R I A K+ M
Sbjct: 474 TYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM 533
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
P+ +TYN+M+ G C+ G + A L EM+ G PD +Y ++ + G+
Sbjct: 534 AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQA 593
Query: 239 KQAIGFWKDQLRKG-CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
+A F D L KG C I YT L+ C++ + A+ V +M G D+V Y
Sbjct: 594 SEAKVFV-DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 652
Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
L++ S K ++ + RG++P+ + Y +++ + G + I D+M
Sbjct: 653 LIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 712
Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK-EGMLNEA 416
P TY +INGLCK G V+ A ++M + P+ VTY L L K E + +A
Sbjct: 713 CVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKA 772
Query: 417 LQLLH-LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
++L + +L G + TYN LI G ++G +E+A L +M+ +G+SPD IT+ T+I
Sbjct: 773 VELHNAILKGLLANTA--TYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMIN 830
Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
CR + V++A++L + ++G + AY +IHG C + ++ A ++ M+ P
Sbjct: 831 ELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890
Query: 536 DDTVFST 542
++ T
Sbjct: 891 NNKTSRT 897
Score = 182 bits (461), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 215/482 (44%), Gaps = 37/482 (7%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T + ++ FC RGKL A + M + +LI G + I A + M
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEM 463
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
+ P +TY ++GG C +G+I A+ L EM+ G P + T+ T+L +F G
Sbjct: 464 INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLI 523
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
+ A+ + + P +TY ++IE C++ +++A E L +M +G PD +Y L
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG--------CWDAVDKIL 350
++ C G+ +A + ++ L E N I Y LLH G C + V + +
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Query: 351 DI---------------------------MNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
D+ M++ P Y +I+ K G A
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703
Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
++ M+++ C P+ VTY V+ LCK G +NEA L + S P +TY +D L
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT 763
Query: 444 KKGC-MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
K M+KA+ L+ +++ G+ + T+ LI GFCR ++EEA +L+ + G
Sbjct: 764 KGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDC 822
Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
Y +I+ LC+ V AI++ M +PD ++T++ G +A +L +
Sbjct: 823 ITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 882
Query: 563 LI 564
++
Sbjct: 883 ML 884
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 194/407 (47%)
Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
+L+ GL + +IE+A +++ +V G P+ YN ++ LCK + A L D M
Sbjct: 337 SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKI 396
Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
G P+ +TY+ ++ GK A+ F + + G + Y LI CK I+ A
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
+ +M + P +VTY SL+ C +GK + A+ + + + +G+ P+ T+ TLL
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG 516
Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
L G K+ + M E + P TYN++I G C+ G + +A +M K PD
Sbjct: 517 LFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
+Y ++ LC G +EA + L+ +C I Y L+ G ++G +E+A+ +
Sbjct: 577 TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQ 636
Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
+M++ G+ D + + LI G + + LLKE+ RG K + Y +I K+
Sbjct: 637 EMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG 696
Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
A + +LMI+ P++ ++ ++ + G EA L K+
Sbjct: 697 DFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM 743
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 174/349 (49%)
Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
P+V T + +L + F A+ + D + G P + YT +I +C+ ++RA E+
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
+ M GC +IV YN L++ CK+ K +AV + +L + ++P+ +TY TL++ L
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
++ +++D M SP+ + L+ GL K G ++ A+N ++V P++
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
YN ++ +LCK +EA L + P +TY+ LID ++G ++ A+ G+M+
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
+ G+ + +LI G C+ + A + E+ + + Y ++ G C K++
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
A+++ M P F+T++ + G+ +A KL+ ++ EW V
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNV 538
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 132/448 (29%), Positives = 224/448 (50%), Gaps = 8/448 (1%)
Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIP---DFHFCINLIRGLIRIDRIEKASKVLQIM 178
KIL+N + DA L M +P DF +++I + R D + + +QI+
Sbjct: 53 KILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQIL 112
Query: 179 VMSGGVPDTI-TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
G+P + T N+++ +C Q A L +M G EPD++T+ ++L +
Sbjct: 113 ----GIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168
Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
+ AI + L G P ++TYT LI +CK + A+E+ + M G P++VTYN+
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228
Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
LV C+ G++ DA ++ +++ R +EPN IT+ L+ + G ++ ++M + S
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288
Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
P VFTY LINGLC YGL+D A F M C P+ V Y T++ CK + + +
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
++ + ++ ITY LI G G + A ++ QM PD T+ L+ G
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408
Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
C +VE+A+ + + + KR + Y ++I G+CK KV+ A + + S KP+
Sbjct: 409 CCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNV 468
Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIE 565
++T++ G+ EA L++K+ E
Sbjct: 469 ITYTTMISGFCRRGLIHEADSLFKKMKE 496
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 187/388 (48%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T N ++ C + AS + M + PD +L+ G +RIE A + +
Sbjct: 120 TCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQI 179
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
+ G P+ +TY ++ LCK + A+ L ++M +G P+V+TYN ++ + + G++
Sbjct: 180 LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRW 239
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
A +D +++ P +IT+T LI+ K + A E+ + M PD+ TY SL
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL 299
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
+N C G D+A + + G PN + Y TL+H + KI M++
Sbjct: 300 INGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
TY +LI G C G D A FNQM S+ PDI TYN +L LC G + +AL
Sbjct: 360 VANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALM 419
Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
+ + ++TY +I G+ K G +E A L+ + G+ P+ IT+ T+I GFC
Sbjct: 420 IFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFC 479
Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYR 506
R + EA L K++ + G S Y+
Sbjct: 480 RRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 175/358 (48%)
Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
E D T +L +C ++ DA L D + P+ LIR L + + A +
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
+ M +G P+ +TYN +V GLC+ G+ A LL +M EP+VIT+ ++
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
GK +A + ++ P + TY LI +C + A ++ M GC P+ V
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329
Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
Y +L++ CK + +D + + + +G+ N+ITY L+ G D ++ + M
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
+ P + TYN+L++GLC G V++A+ F M + +IVTY ++ +CK G +
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449
Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
+A L L P +ITY T+I G ++G + +A L+ +M E+G P++ ++
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 145 bits (367), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 175/378 (46%), Gaps = 41/378 (10%)
Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
+Y ILR N +F A+ + + P +I +T L+ + K I + + M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
I G P + T N +++ C + A + ++ G EP+ +T+ +LL+ W
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCH---W 166
Query: 344 DAVDKILDIMNE---ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
+ ++ + + ++ P V TY LI LCK ++ A+ FNQM + +P++VTY
Sbjct: 167 NRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTY 226
Query: 401 NTVLGALC-----------------------------------KEGMLNEALQLLHLLNG 425
N ++ LC K G L EA +L +++
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
S P + TY +LI+GL G +++A ++ M NG P+++ + TLI GFC++ +VE+
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVED 346
Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
+ + E+ ++G Y ++I G C + D+A +V M S R PD ++ ++
Sbjct: 347 GMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLD 406
Query: 546 KVADDGMTEEAYKLWQKL 563
+ +G E+A +++ +
Sbjct: 407 GLCCNGKVEKALMIFEYM 424
Score = 116 bits (290), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 121/253 (47%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
+E + T ++ F GKL +A +L ++M + + PD +LI GL +++A
Sbjct: 254 IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEAR 313
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
++ +M +G P+ + Y ++ G CK ++ + + EMS G + ITY +++
Sbjct: 314 QMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGY 373
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
G+ A + + PP + TY +L++ +C + +A+ + + M +I
Sbjct: 374 CLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINI 433
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
VTY ++ CK GK +DA + +L S+GM+PN ITY T++ RG D +
Sbjct: 434 VTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKK 493
Query: 353 MNEASHSPTVFTY 365
M E P Y
Sbjct: 494 MKEDGFLPNESVY 506
Score = 89.0 bits (219), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 104/223 (46%), Gaps = 3/223 (1%)
Query: 350 LDIMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
LD+ HS P++ + L++ + K D I+ F QM P + T N V+
Sbjct: 68 LDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHC 127
Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
+C A L + P L+T+ +L++G +E A+ L+ Q++ G P+
Sbjct: 128 VCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPN 187
Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
+T+ TLI C+ + AV+L ++G G++ Y ++ GLC+ + A +L
Sbjct: 188 VVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLR 247
Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
M+ R +P+ F+ ++ G EA +L+ +I+ V+
Sbjct: 248 DMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVY 290
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 98/202 (48%), Gaps = 1/202 (0%)
Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
IL NGL D A++ F +MV P I+ + +L + K + + L +
Sbjct: 54 ILRNGLHNLQFND-ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQIL 112
Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
P L T N ++ + +A G+MM+ G PD +T +L+ G+C +++E+A
Sbjct: 113 GIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDA 172
Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
+ L +I G K Y +I LCK++ ++ A+++ M ++ +P+ ++ +V
Sbjct: 173 IALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTG 232
Query: 547 VADDGMTEEAYKLWQKLIEWKV 568
+ + G +A L + +++ ++
Sbjct: 233 LCEIGRWGDAAWLLRDMMKRRI 254
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 213 bits (541), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 226/444 (50%)
Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
K+ F + DA L M +P L+ + R E Q M +
Sbjct: 41 KLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELY 100
Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
G D ++ +++ C+ ++ A+++L +M G EP ++T+ ++L + A
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
++ G P ++ Y LI+ +CK + A+E+L++M +G D+VTYN+L+
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
C G++ DA ++ +++ R + P+ +T+ L+ +G D ++ M ++S P
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
TYN +INGLC +G + A +F+ M SK C P++VTYNT++ CK M++E ++L
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340
Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
++ + + TYNTLI G + G + A+ ++ M+ ++PD ITH L+ G C
Sbjct: 341 RMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNG 400
Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
++E A+ ++ + + AY ++IHGLCK+ KV+ A ++ + KPD ++
Sbjct: 401 EIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYT 460
Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
++ + +G EA +L +++ E
Sbjct: 461 IMILGLCKNGPRREADELIRRMKE 484
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 201/385 (52%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
+ +D + ++ FC +L+ A ++ M + P +L+ G ++RI A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
++ +MV SG P+ + YN ++ GLCK G++ A+ LL+EM G DV+TYNT+L +
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
+G++ A +D +++ P ++T+T LI+ KQ + A E+ +M P+
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
VTYNS++N C G+ DA + + S+G PN +TYNTL+ D K+
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
M+ + +FTYN LI+G C+ G + A++ F MVS+ PDI+T+ +L LC G
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401
Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
+ AL + S ++ YN +I GL K +EKA L+ ++ G+ PD T+
Sbjct: 402 IESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTI 461
Query: 473 LIWGFCRADQVEEAVDLLKEIGKRG 497
+I G C+ EA +L++ + + G
Sbjct: 462 MILGLCKNGPRREADELIRRMKEEG 486
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 170/345 (49%), Gaps = 1/345 (0%)
Query: 225 YNTILRTMFDNG-KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
Y LRT F + +F+ A + + + P ++ +T L+ I M
Sbjct: 38 YREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKM 97
Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
+ G S D+ ++ L++ C+ + A+ V+ ++ G EP+ +T+ +LLH
Sbjct: 98 ELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRI 157
Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
++ +M ++ + P V YN LI+GLCK G ++ A+ N+M K D+VTYNT+
Sbjct: 158 GDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTL 217
Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
L LC G ++A ++L + S +P ++T+ LID K+G +++A LY +M+++ +
Sbjct: 218 LTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277
Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
P+++T+ ++I G C ++ +A + +G Y +I G CK + VD ++
Sbjct: 278 DPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMK 337
Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
+ + M + D ++T++ G A ++ ++ +V
Sbjct: 338 LFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRV 382
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 136/300 (45%), Gaps = 4/300 (1%)
Query: 58 CRGLPGNVCIDRVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSD--GPFVEN 115
C+ N+ ++ +NE+++ ++ V+ N L GL + + D + D +
Sbjct: 187 CKNGELNIALELLNEMEKKGLGAD--VVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP 244
Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
D T ++ F +G L +A +L M + + P+ ++I GL R+ A K
Sbjct: 245 DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF 304
Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
+M G P+ +TYN ++ G CK + + L MS G D+ TYNT++
Sbjct: 305 DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQV 364
Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
GK + A+ + + + P +IT+ IL+ +C I A+ DDM IV Y
Sbjct: 365 GKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAY 424
Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
N +++ CK K + A + L G++P++ TY ++ L G D+++ M E
Sbjct: 425 NIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 207/374 (55%)
Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
M+ G PD +T N ++ G C +I A+AL+D+M G +PD +T+ T++ +F + K
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
+A+ +++GC P L+TY ++ +CK+ A+ +L+ M ++V Y++
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
+++ CK DDA+ + + ++G+ PN ITY++L+ L + G W ++L M E
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
+P + T++ LI+ K G + +A + +M+ ++ P+I TY++++ C L EA
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378
Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
Q+L L+ C P ++TYNTLI+G K ++K M L+ +M + G+ + +T+ TLI GF
Sbjct: 379 QMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 438
Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
+A + A + K++ G Y +++ GLCK+ K+ A+ V E + S +PD
Sbjct: 439 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 498
Query: 538 TVFSTIVKKVADDG 551
++ +++ + G
Sbjct: 499 YTYNIMIEGMCKAG 512
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 189/369 (51%)
Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
E D T N +L FC +++DA L+D M PD LI GL ++ +A
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 204
Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
++ MV G PD +TY +V GLCKRG A+ LL++M + E +V+ Y+T++ ++
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264
Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
A+ + + KG P +ITY+ LI +C + A +L DM +P++V
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324
Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
T+++L++ K+GK A + ++ R ++PN TY++L++ ++L++M
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
P V TYN LING CK VD+ + F +M + + VTY T++ +
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 444
Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
+ A + + P ++TYN L+DGL K G + KAMV++ + + + PD T+ +
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504
Query: 474 IWGFCRADQ 482
I G C+A +
Sbjct: 505 IEGMCKAGK 513
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 212/409 (51%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
+ ++ T N ++ FC +L+ A L+ M + PD +L+ G +RI A
Sbjct: 109 ISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 168
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
++ MV G PDT+T+ ++ GL + A+AL+D M GC+PD++TY ++ +
Sbjct: 169 ALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGL 228
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
G A+ ++ Y+ +I+ +CK A+ + +M +G P++
Sbjct: 229 CKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 288
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
+TY+SL++ C G++ DA ++++++ R + PN +T++ L+ + +G +K+ +
Sbjct: 289 ITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEE 348
Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
M + S P +FTY+ LING C + A M+ K+C P++VTYNT++ CK
Sbjct: 349 MIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKR 408
Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
+++ ++L ++ +TY TLI G + + A +++ QM+ G+ P+ +T+
Sbjct: 409 VDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 468
Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
L+ G C+ ++ +A+ + + + + + Y ++I G+CK+ K M
Sbjct: 469 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 182/362 (50%)
Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
++ AI L M+ S P +I ++ +L + KF I F + G L TY
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
ILI C+ ++ A+ +L M G PDIVT NSL+N C + DAV +++ ++
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
G +P+++T+ TL+H L ++D M + P + TY ++NGLCK G D A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
+N N+M + + ++V Y+TV+ +LCK ++AL L + P +ITY++LI
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
L G A L M+E I+P+ +T LI F + ++ +A L +E+ KR
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
Y +I+G C ++ A Q+LELMI P+ ++T++ ++ +L++
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417
Query: 562 KL 563
++
Sbjct: 418 EM 419
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 174/390 (44%), Gaps = 70/390 (17%)
Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
Y +LRT + + AIG + + P +I ++ L+ + K I + M
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 285 IEGCSPDIVTYNSLVNFSCK-----------------------------------QGKYD 309
I G S ++ TYN L+N C+ +
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLG----------------SRGCW---------- 343
DAV +++ ++ G +P+++T+ TL+H L RGC
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 344 ---------DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
D +L+ M A V Y+ +I+ LCKY D A+N F +M +K +
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
P+++TY++++ LC G ++A +LL + +P L+T++ LID KKG + KA L
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345
Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
Y +M++ I P+ T+ +LI GFC D++ EA +L+ + ++ Y +I+G CK
Sbjct: 346 YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405
Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
+K+VD +++ M + ++T++
Sbjct: 406 AKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Score = 102 bits (253), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 127/260 (48%)
Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
DDA+ + + P+ I ++ LL ++ +D V + M S ++TYNIL
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
IN C+ + A+ +M+ +PDIVT N++L C +++A+ L+ +
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
P +T+ TLI GL +A+ L +M++ G PD +T+ ++ G C+ + A++
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
LL ++ + Y VI LCK + D A+ + M + +P+ +S+++ +
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 549 DDGMTEEAYKLWQKLIEWKV 568
+ G +A +L +IE K+
Sbjct: 300 NYGRWSDASRLLSDMIERKI 319
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 226/447 (50%), Gaps = 6/447 (1%)
Query: 132 KLTDASKLIDIMARRNQIP---DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
KL DA L M + P DF+ ++ I L + D + K ++++ G D
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVL---GIRNDLY 121
Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
T+N+++ C Q+ A+++L +M G EPD +T +++ + A+
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
+ G P ++ Y +I+ +CK + A + ++ +G P++VTY +LVN C ++
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
DA ++++++ + + PN ITY+ LL + G ++ + M S P + TY+ L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
INGLC + +D A F+ MVSK C D+V+YNT++ CK + + ++L ++
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
+TYNTLI G + G ++KA + QM GISPD T+ L+ G C ++E+A+
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421
Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
+ +++ KR + Y VI G+CK+ KV+ A + + KPD ++T++ +
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
Query: 549 DDGMTEEAYKLWQKLIEWKVFEKGTTL 575
G+ E L+ K+ + + + TL
Sbjct: 482 TKGLLHEVEALYTKMKQEGLMKNDCTL 508
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 182/356 (51%)
Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
E D T ++ FC R +++DA L+D M PD +I L + R+ A
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD 211
Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
+ + G P+ +TY +V GLC + A LL +M P+VITY+ +L
Sbjct: 212 FFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 271
Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
NGK +A +++ +R P ++TY+ LI +C I A ++ D M +GC D+V
Sbjct: 272 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVV 331
Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
+YN+L+N CK + +D + + + RG+ N++TYNTL+ G D + M
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
+ SP ++TYNIL+ GLC G +++A+ F M + DIVTY TV+ +CK G +
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 451
Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
EA L L+ P ++TY T++ GL KG + + LY +M + G+ +D T
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 202/401 (50%)
Query: 163 IRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
+R ++ A + MV S P + +N ++ + K + I+L +M V G D+
Sbjct: 61 LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120
Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
T+N ++ + A+ L+ G P +T L+ C++ ++ A+ ++D
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
M G PDIV YN++++ CK + +DA + +G+ PN +TY L++ L +
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
W ++L M + +P V TY+ L++ K G V A F +MV + PDIVTY++
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
++ LC ++EA Q+ L+ C +++YNTLI+G K +E M L+ +M + G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
+ + +T+ TLI GF +A V++A + ++ G Y +++ GLC + +++ A+
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
+ E M D ++T+++ + G EEA+ L+ L
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 461
Score = 188 bits (478), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 193/385 (50%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
+ ND T N ++ FC +++ A ++ M + PD +L+ G R +R+ A
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
++ MV G PD + YN ++ LCK ++ A E+ G P+V+TY ++ +
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
++ ++ A D ++K P +ITY+ L++ K + A E+ ++M PDI
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
VTY+SL+N C + D+A + + ++S+G + ++YNTL++ + K+
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
M++ TYN LI G + G VD+A F+QM PDI TYN +LG LC G
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415
Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
L +AL + + ++TY T+I G+ K G +E+A L+ + G+ PD +T+ T
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475
Query: 473 LIWGFCRADQVEEAVDLLKEIGKRG 497
++ G C + E L ++ + G
Sbjct: 476 MMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 165/334 (49%)
Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
+T + K AI + D ++ P ++ + L+ + K I + M + G
Sbjct: 58 KTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIR 117
Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
D+ T+N ++N C + A+ ++ +L G EP+ +T +L++ R +
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
+D M E + P + YN +I+ LCK V+ A + F ++ K +P++VTY ++ LC
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
++A +LL + +P +ITY+ L+D K G + +A L+ +M+ I PD +T
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
+ +LI G C D+++EA + + +G +Y +I+G CK+K+V+ +++ M
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
+ ++T+++ G ++A + + ++
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/442 (28%), Positives = 217/442 (49%)
Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
+++ + KL +A + ++ + C LI L+RI +E A V Q + SG
Sbjct: 171 LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG 230
Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
+ T N+MV LCK G++ L ++ G PD++TYNT++ G ++A
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF 290
Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
KG P + TY +I +CK RA EV +M G SPD TY SL+ +
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
CK+G + V +++ SR + P+ + +++++ G D + + EA P
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
Y ILI G C+ G++ A+N N+M+ + C D+VTYNT+L LCK ML EA +L +
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
+ + P T LIDG K G ++ AM L+ +M E I D +T+ TL+ GF +
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
++ A ++ ++ + +Y ++++ LC + A +V + MIS KP + ++
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590
Query: 543 IVKKVADDGMTEEAYKLWQKLI 564
++K G + +K+I
Sbjct: 591 MIKGYCRSGNASDGESFLEKMI 612
Score = 202 bits (514), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 225/459 (49%), Gaps = 37/459 (8%)
Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
D T N ++ + S+G + +A +L++ M + P + +I GL + + E+A +V
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
M+ SG PD+ TY ++ CK+G + + +M PD++ +++++ +
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388
Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
G +A+ ++ G P + YTILI+ C++ I+ A+ + ++M +GC+ D+VTY
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTY 448
Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS---------------------------- 327
N++++ CK+ +A + N + R + P+S
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 328 -------ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
+TYNTLL G G D +I M PT +Y+IL+N LC G +
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAE 568
Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
A +++M+SKN +P ++ N+++ C+ G ++ L + P I+YNTLI
Sbjct: 569 AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIY 628
Query: 441 GLAKKGCMEKAMVLYGQMMEN--GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
G ++ M KA L +M E G+ PD T+ +++ GFCR +Q++EA +L+++ +RG
Sbjct: 629 GFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGV 688
Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
S Y +I+G + A ++ + M+ + PDD
Sbjct: 689 NPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 194/408 (47%)
Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
++ L + ++EK L + G PD +TYN ++ +G + A L++ M G
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
P V TYNT++ + +GK+++A + + LR G P TY L+ + CK+ +
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
+V DM PD+V ++S+++ + G D A++ N++ G+ P+++ Y L+
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
+G + + M + + V TYN +++GLCK ++ A FN+M + PD
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
T ++ CK G L A++L + ++TYNTL+DG K G ++ A ++
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540
Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
M+ I P I++ L+ C + EA + E+ + K +I G C+S
Sbjct: 541 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600
Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
LE MIS + PD ++T++ + +A+ L +K+ E
Sbjct: 601 ASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE 648
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 212/443 (47%), Gaps = 24/443 (5%)
Query: 130 RGKLTDASKLIDIMARRNQIPDF-HFCINL---IRGLIRIDRIEKASKVLQIMVMSGGVP 185
R LT + +D + P+F H ++L I L+R R+ A L M+ GV
Sbjct: 89 RNDLTLGQRFVDQLGF--HFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGV- 145
Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
R +I +++ + + S C + ++ ++RT K ++A +
Sbjct: 146 -------------SRLEIVNSL----DSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAF 188
Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
KG + LI + + + A V +++ G ++ T N +VN CK
Sbjct: 189 TLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKD 248
Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
GK + ++ + +G+ P+ +TYNTL+ + S+G + ++++ M SP V+TY
Sbjct: 249 GKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTY 308
Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
N +INGLCK+G +RA F +M+ PD TY ++L CK+G + E ++ +
Sbjct: 309 NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRS 368
Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
P L+ +++++ + G ++KA++ + + E G+ PD++ + LI G+CR +
Sbjct: 369 RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISV 428
Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
A++L E+ ++G M Y ++HGLCK K + A ++ M PD + ++
Sbjct: 429 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488
Query: 546 KVADDGMTEEAYKLWQKLIEWKV 568
G + A +L+QK+ E ++
Sbjct: 489 GHCKLGNLQNAMELFQKMKEKRI 511
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 209/435 (48%), Gaps = 6/435 (1%)
Query: 137 SKLIDIMARRNQIPDFHFCINLIRGLIR--IDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
S +I I+ R ++ D C L+R + R + R+E + L + G D++ +++++
Sbjct: 117 SAMIHILVRSGRLSDAQSC--LLRMIRRSGVSRLEIVNS-LDSTFSNCGSNDSV-FDLLI 172
Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
+ ++R A + G + N ++ ++ G + A G +++ R G
Sbjct: 173 RTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVG 232
Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
+ T I++ +CK + + L + +G PDIVTYN+L++ +G ++A +
Sbjct: 233 INVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFEL 292
Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
+N + +G P TYNT+++ L G ++ ++ M + SP TY L+ CK
Sbjct: 293 MNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 352
Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
G V F+ M S++ PD+V +++++ + G L++AL + + + P +
Sbjct: 353 KGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 412
Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
Y LI G +KG + AM L +M++ G + D +T+ T++ G C+ + EA L E+
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
+R + ++I G CK + A+++ + M R + D ++T++ G +
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDID 532
Query: 555 EAYKLWQKLIEWKVF 569
A ++W ++ ++
Sbjct: 533 TAKEIWADMVSKEIL 547
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 225/448 (50%), Gaps = 5/448 (1%)
Query: 117 EKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
E + K+LQ+ KL DA L M + P L+ + ++++ + + +
Sbjct: 44 ENLSRKVLQDL----KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGE 99
Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
M G + TY++ + C+R Q+ A+A+L +M G P ++T N++L
Sbjct: 100 QMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 159
Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
+ +A+ + G P +T+T L+ + + + A+ +++ M ++GC PD+VTY
Sbjct: 160 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 219
Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
+++N CK+G+ D A+ ++N + +E + + YNT++ L D + + M
Sbjct: 220 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 279
Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
P VFTYN LI+ LC YG A + M+ KN PD+V +N ++ A KEG L EA
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 417 LQLL-HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
+L ++ C P ++ YNTLI G K +E+ M ++ +M + G+ + +T+ TLI
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
GF +A + A + K++ G Y +++ GLC + V+ A+ V E M K
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKL 563
D ++T+++ + G E+ + L+ L
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSL 487
Score = 206 bits (523), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 127/431 (29%), Positives = 213/431 (49%), Gaps = 38/431 (8%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T N +L FC ++++A L+D M PD L+ GL + ++ +A +++ M
Sbjct: 147 TLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM 206
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQ-----------------------------------I 203
V+ G PD +TY ++ GLCKRG+ +
Sbjct: 207 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHM 266
Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
A L ++M G +PDV TYN ++ + + G++ A D L K P L+ + L
Sbjct: 267 DDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNAL 326
Query: 264 IEQVCKQCGIARAIEVLDDMA-IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
I+ K+ + A ++ D+M + C PD+V YN+L+ CK + ++ + V + RG
Sbjct: 327 IDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386
Query: 323 MEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
+ N++TY TL+H +R C +A ++++ H P + TYNIL++GLC G V+ A
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH-PDIMTYNILLDGLCNNGNVETA 445
Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
+ F M ++ + DIVTY T++ ALCK G + + L L+ P ++TY T++ G
Sbjct: 446 LVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 505
Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
+KG E+A L+ +M E+G P+ T+ TLI R + +L+KE+ G
Sbjct: 506 FCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGD 565
Query: 502 NSAYRLVIHGL 512
S + LV + L
Sbjct: 566 ASTFGLVTNML 576
Score = 202 bits (513), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 220/446 (49%), Gaps = 1/446 (0%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T + + FC R +L+ A ++ M + P +L+ G +RI +A ++ M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
V G PDT+T+ +V GL + + A+AL++ M V GC+PD++TY ++ + G+
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
A+ + ++ Y +I+ +CK + A ++ + M +G PD+ TYN L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
++ C G++ DA +++++L + + P+ + +N L+ + G +K+ D M ++ H
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 359 S-PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
P V YN LI G CKY V+ + F +M + + VTY T++ + + A
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411
Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
+ + P ++TYN L+DGL G +E A+V++ M + + D +T+ T+I
Sbjct: 412 MVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEAL 471
Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
C+A +VE+ DL + +G K Y ++ G C+ + A + M P+
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNS 531
Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKL 563
++T+++ DG + +L +++
Sbjct: 532 GTYNTLIRARLRDGDEAASAELIKEM 557
Score = 132 bits (331), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 147/305 (48%)
Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
L +V + + AI + DM P IV ++ L++ K K+D + + + + G
Sbjct: 46 LSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG 105
Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
+ N TY+ ++ R IL M + + P++ T N L+NG C + A+
Sbjct: 106 ISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 165
Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
+QMV QPD VT+ T++ L + +EA+ L+ + C P L+TY +I+GL
Sbjct: 166 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 225
Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
K+G + A+ L +M + I D + + T+I G C+ +++A DL ++ +G K
Sbjct: 226 CKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV 285
Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
Y +I LC + A ++L M+ PD F+ ++ +G EA KL+ +
Sbjct: 286 FTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDE 345
Query: 563 LIEWK 567
+++ K
Sbjct: 346 MVKSK 350
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 159/343 (46%), Gaps = 7/343 (2%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
+E D N I+ C + DA L + M + PD LI L R AS
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDAS 305
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTILRT 231
++L M+ PD + +N ++ K G++ A L DEM S C PDV+ YNT+++
Sbjct: 306 RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKG 365
Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
+ ++ + +++ ++G +TYT LI + A V M +G PD
Sbjct: 366 FCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPD 425
Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
I+TYN L++ C G + A++V + R M+ + +TY T++ +L G + +
Sbjct: 426 IMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFC 485
Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
++ P V TY +++G C+ GL + A F +M P+ TYNT++ A ++G
Sbjct: 486 SLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545
Query: 412 MLNEALQLLHLLN-----GSSCSPCLITYNTLIDGLAKKGCME 449
+ +L+ + G + + L+T N L DG K ++
Sbjct: 546 DEAASAELIKEMRSCGFAGDASTFGLVT-NMLHDGRLDKSFLD 587
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 93/191 (48%)
Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
+D AI F MV P IV ++ +L A+ K + + L + S L TY+
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
I+ ++ + A+ + G+MM+ G P +T +L+ GFC +++ EAV L+ ++ + G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
+ + ++HGL + K A+ ++E M+ +PD + ++ + G + A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 558 KLWQKLIEWKV 568
L K+ + K+
Sbjct: 236 NLLNKMEKGKI 246
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 2/129 (1%)
Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
SDG V D T N +L C+ G + A + + M +R+ D +I L + +
Sbjct: 419 SDG--VHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGK 476
Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
+E + + + G P+ +TY M+ G C++G A AL EM G P+ TYNT
Sbjct: 477 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNT 536
Query: 228 ILRTMFDNG 236
++R +G
Sbjct: 537 LIRARLRDG 545
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/487 (27%), Positives = 226/487 (46%), Gaps = 36/487 (7%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
V+ D T N ++ + C ++ L+ M +R P+ LI G ++ AS
Sbjct: 259 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 318
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
++L M+ G P+ +T+N ++ G G + A+ + M G P ++Y +L +
Sbjct: 319 QLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 378
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
N +F A GF+ R G ITYT +I+ +CK + A+ +L++M+ +G PDI
Sbjct: 379 CKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDI 438
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
VTY++L+N CK G++ A ++ + G+ PN I Y+TL+++ GC +I +
Sbjct: 439 VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 498
Query: 353 MNEASHSPTVFTYNILINGLCKYGLVD--------------------------------- 379
M H+ FT+N+L+ LCK G V
Sbjct: 499 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 558
Query: 380 --RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
+A + F++M P TY ++L LCK G L EA + L L+ + + YNT
Sbjct: 559 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 618
Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
L+ + K G + KA+ L+G+M++ I PD T+ +LI G CR + A+ KE RG
Sbjct: 619 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 678
Query: 498 NKMRNSA-YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
N + N Y + G+ K+ + I E M + + PD + ++ + G E+
Sbjct: 679 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 738
Query: 557 YKLWQKL 563
L ++
Sbjct: 739 NDLLPEM 745
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 220/443 (49%)
Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
+++ + G + D+ ++ +M P + C ++ +++ L+ M+
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 188
Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
PD T+N+++ LC G + L+ +M SG P ++TYNT+L G+FK AI
Sbjct: 189 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 248
Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
KG + TY +LI +C+ IA+ +L DM P+ VTYN+L+N
Sbjct: 249 ELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGF 308
Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
+GK A ++N +LS G+ PN +T+N L+ S G + K+ +M +P+
Sbjct: 309 SNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE 368
Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
+Y +L++GLCK D A + +M +TY ++ LCK G L+EA+ LL+
Sbjct: 369 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 428
Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
++ P ++TY+ LI+G K G + A + ++ G+SP+ I + TLI+ CR
Sbjct: 429 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 488
Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
++EA+ + + + G+ + + +++ LCK+ KV A + + M S P+ F
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548
Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
++ + G +A+ ++ ++ +
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTK 571
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 211/445 (47%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T N IL + G+ + M +R PD LI L EK+S ++Q M
Sbjct: 160 TCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM 219
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
SG P +TYN ++ CK+G+ ++AI LLD M G + DV TYN ++ + + +
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 279
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
+ +D ++ P +TY LI + + A ++L++M G SP+ VT+N+L
Sbjct: 280 AKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 339
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
++ +G + +A+ + + ++G+ P+ ++Y LL L +D M
Sbjct: 340 IDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGV 399
Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
TY +I+GLCK G +D A+ N+M PDIVTY+ ++ CK G A +
Sbjct: 400 CVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKE 459
Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
++ + SP I Y+TLI + GC+++A+ +Y M+ G + D T L+ C
Sbjct: 460 IVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLC 519
Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
+A +V EA + ++ + G ++ +I+G S + A V + M + P
Sbjct: 520 KAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFF 579
Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
+ +++K + G EA K + L
Sbjct: 580 TYGSLLKGLCKGGHLREAEKFLKSL 604
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 205/435 (47%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T N +L +C +G+ A +L+D M + D LI L R +RI K +L+ M
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 289
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
P+ +TYN ++ G G++ A LL+EM G P+ +T+N ++ G F
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 349
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
K+A+ + KG P ++Y +L++ +CK A M G +TY +
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
++ CK G D+AV+++N + G++P+ +TY+ L++ G + +I+ +
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 469
Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
SP Y+ LI C+ G + AI + M+ + D T+N ++ +LCK G + EA +
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 529
Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
+ + P ++++ LI+G G KA ++ +M + G P T+ +L+ G C
Sbjct: 530 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589
Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
+ + EA LK + + Y ++ +CKS + A+ + M+ PD
Sbjct: 590 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 649
Query: 539 VFSTIVKKVADDGMT 553
+++++ + G T
Sbjct: 650 TYTSLISGLCRKGKT 664
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 193/375 (51%)
Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
Y++++ + G I+ ++ + M + G P V T N IL ++ +G+ F K+ L
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185
Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
++ P + T+ ILI +C + ++ ++ M G +P IVTYN+++++ CK+G++
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245
Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
A+ +++++ S+G++ + TYN L+H L +L M + P TYN LI
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305
Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
NG G V A N+M+S P+ VT+N ++ EG EAL++ +++ +
Sbjct: 306 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365
Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
P ++Y L+DGL K + A Y +M NG+ IT+ +I G C+ ++EAV L
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 425
Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
L E+ K G Y +I+G CK + A +++ + P+ ++ST++
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485
Query: 550 DGMTEEAYKLWQKLI 564
G +EA ++++ +I
Sbjct: 486 MGCLKEAIRIYEAMI 500
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 206/427 (48%), Gaps = 7/427 (1%)
Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
S DG ++ D T + ++ FC G+ A +++ + R P+ LI R+
Sbjct: 430 SKDG--IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 487
Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
+++A ++ + M++ G D T+N++V LCK G++ A + M+ G P+ ++++
Sbjct: 488 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 547
Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
++ ++G+ +A + + + G P TY L++ +CK + A + L +
Sbjct: 548 CLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAV 607
Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
+ D V YN+L+ CK G AV + ++ R + P+S TY +L+ L +G V
Sbjct: 608 PAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG--KTV 665
Query: 347 DKILDIMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
IL + P Y ++G+ K G I QM + PDIVT N +
Sbjct: 666 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 725
Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
+ + G + + LL + + P L TYN L+ G +K+ + + +LY ++ NGI
Sbjct: 726 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785
Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
PD +T +L+ G C ++ +E + +LK RG ++ + ++I C + +++ A
Sbjct: 786 LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD 845
Query: 524 VLELMIS 530
++++M S
Sbjct: 846 LVKVMTS 852
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 214/483 (44%), Gaps = 38/483 (7%)
Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMVMS 181
++ N C G L +A ++ + M D HF N L+ L + ++ +A + ++ M
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRD-HFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 537
Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
G +P+T++++ ++ G G+ A ++ DEM+ G P TY ++L+ + G ++A
Sbjct: 538 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 597
Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
F K + Y L+ +CK +A+A+ + +M PD TY SL++
Sbjct: 598 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 657
Query: 302 SCKQGKYDDAVLVINNLLSRG-MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
C++GK A+L +RG + PN + Y + + G W A + M+ H+P
Sbjct: 658 LCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTP 717
Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG--------------- 405
+ T N +I+G + G +++ + +M ++N P++ TYN +L
Sbjct: 718 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 777
Query: 406 --------------------ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
+C+ ML L++L T+N LI
Sbjct: 778 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 837
Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
G + A L M GIS D T ++ R + +E+ +L E+ K+G + Y
Sbjct: 838 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 897
Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
+I+GLC+ + A V E MI+ + P + S +V+ +A G +EA L + +++
Sbjct: 898 IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK 957
Query: 566 WKV 568
K+
Sbjct: 958 MKL 960
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/469 (21%), Positives = 209/469 (44%), Gaps = 13/469 (2%)
Query: 96 ITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFC 155
+TK H P+ T +L+ C G L +A K + + D
Sbjct: 569 MTKVGHHPTFF------------TYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMY 616
Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
L+ + + + KA + MV +PD+ TY ++ GLC++G+ AI E
Sbjct: 617 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEA 676
Query: 216 SG-CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
G P+ + Y + MF G++K I F + G P ++T +I+ + I
Sbjct: 677 RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 736
Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
+ ++L +M + P++ TYN L++ K+ + L+ +++ G+ P+ +T ++L+
Sbjct: 737 KTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 796
Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
+ + KIL +T+N+LI+ C G ++ A + M S
Sbjct: 797 LGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGIS 856
Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
D T + ++ L + E+ +LH ++ SP Y LI+GL + G ++ A V+
Sbjct: 857 LDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVV 916
Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
+M+ + I P ++ ++ + + +EA LL+ + K +++ ++H CK
Sbjct: 917 KEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCK 976
Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
+ V A+++ +M + K D ++ ++ + G A++L++++
Sbjct: 977 NGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1025
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 182/433 (42%), Gaps = 36/433 (8%)
Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
D N +L C G L A L M +R+ +PD + +LI GL R + A
Sbjct: 612 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 671
Query: 176 QIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
+ G V P+ + Y V G+ K GQ ++ I ++M G PD++T N ++
Sbjct: 672 KEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSR 731
Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
GK ++ + + P L TY IL+ K+ ++ + + + + G PD +T
Sbjct: 732 MGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 791
Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH------------------- 335
+SLV C+ + + ++ + RG+E + T+N L+
Sbjct: 792 CHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMT 851
Query: 336 SLGSRGCWDAVDKILDIMNEASH----------------SPTVFTYNILINGLCKYGLVD 379
SLG D D ++ ++N SP Y LINGLC+ G +
Sbjct: 852 SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 911
Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
A +M++ P V + ++ AL K G +EA LL + P + ++ TL+
Sbjct: 912 TAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 971
Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
K G + +A+ L M G+ D +++ LI G C + A +L +E+ G
Sbjct: 972 HLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFL 1031
Query: 500 MRNSAYRLVIHGL 512
+ Y+ +I GL
Sbjct: 1032 ANATTYKALIRGL 1044
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 117/236 (49%), Gaps = 2/236 (0%)
Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
N Y+ L+ G +I +M +P+V+T N ++ + K G D ++ SF
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG-EDVSVWSF 180
Query: 386 -NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
+M+ + PD+ T+N ++ LC EG ++ L+ + S +P ++TYNT++ K
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240
Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
KG + A+ L M G+ D T+ LI CR++++ + LL+++ KR
Sbjct: 241 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 300
Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
Y +I+G KV +A Q+L M+S P+ F+ ++ +G +EA K++
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 356
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 109/239 (45%), Gaps = 1/239 (0%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
VE D T N ++ C+ G++ A L+ +M D C ++ L R R +++
Sbjct: 820 VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESR 879
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
VL M G P++ Y ++ GLC+ G I++A + +EM P + + ++R +
Sbjct: 880 MVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 939
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
GK +A + L+ P + ++T L+ CK + A+E+ M+ G D+
Sbjct: 940 AKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDL 999
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR-GCWDAVDKIL 350
V+YN L+ C +G A + + G N+ TY L+ L +R + D IL
Sbjct: 1000 VSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIIL 1058
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 104/208 (50%), Gaps = 2/208 (0%)
Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
+P+V Y+ILI + G++ ++ F M P + T N +LG++ K G
Sbjct: 122 NPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179
Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
L + P + T+N LI+ L +G EK+ L +M ++G +P +T+ T++ +C
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239
Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
+ + + A++LL + +G Y ++IH LC+S ++ +L M P++
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299
Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEW 566
++T++ +++G A +L +++ +
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSF 327
>sp|O81908|PPR2_ARATH Pentatricopeptide repeat-containing protein At1g02060,
chloroplastic OS=Arabidopsis thaliana GN=At1g02060 PE=2
SV=2
Length = 710
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/463 (29%), Positives = 234/463 (50%), Gaps = 19/463 (4%)
Query: 123 ILQNFCSRGKLTDASK--LIDIMARRN---QIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
++ F R + + ++ L I R N ++ D +F +LIR +++ K+ Q
Sbjct: 105 LMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFN-SLIRSYGNAGLFQESVKLFQT 163
Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTILRTMFDNG 236
M G P +T+N ++ L KRG+ A L DEM + G PD T+NT++ N
Sbjct: 164 MKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNS 223
Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG--CSPDIVT 294
+A +KD C P ++TY +I+ +C+ + A VL M + P++V+
Sbjct: 224 MVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVS 283
Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
Y +LV C + + D+AVLV +++LSRG++PN++TYNTL+ L +D + IL N
Sbjct: 284 YTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGN 343
Query: 355 EA--SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC---- 408
+A + +P T+NILI C G +D A+ F +M++ PD +Y+ ++ LC
Sbjct: 344 DAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNE 403
Query: 409 ---KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
E + NE + LL C P YN + + L G ++A ++ Q+M+ G+
Sbjct: 404 FDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ- 462
Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
D +++TLI G CR + + A +LL + +R Y L+I GL K + +A L
Sbjct: 463 DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTL 522
Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
+ M+ S Y P T F +++ ++A E++ L ++E ++
Sbjct: 523 QRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRI 565
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 216/476 (45%), Gaps = 44/476 (9%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQI 177
T N +L RG+ A L D M R + PD + LI G + +++A ++ +
Sbjct: 175 TFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKD 234
Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM--SVSGCEPDVITYNTILRTMFDN 235
M + PD +TYN ++ GLC+ G+++ A +L M + P+V++Y T++R
Sbjct: 235 MELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMK 294
Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG------CS 289
+ +A+ + D L +G P +TY LI+ + + A + + D+ I G +
Sbjct: 295 QEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSE----AHRYDEIKDILIGGNDAFTTFA 350
Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
PD T+N L+ C G D A+ V +L+ + P+S +Y+ L+ +L R +D + +
Sbjct: 351 PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETL 410
Query: 350 LD-------IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
+ ++ + P YN + LC G +A F Q++ + Q D +Y T
Sbjct: 411 FNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKT 469
Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
++ C+EG A +LL L+ P L TY LIDGL K G A +M+ +
Sbjct: 470 LITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSS 529
Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK--SKKVDM 520
P T + +L E+ KR K N ++ LV L K + +D+
Sbjct: 530 YLPVATTFHS----------------VLAELAKR--KFANESFCLVTLMLEKRIRQNIDL 571
Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLL 576
+ QV+ L+ SS K + IV+ + D+G + +L L E + TL+
Sbjct: 572 STQVVRLLFSSAQKEKAFL---IVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLV 624
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/503 (21%), Positives = 203/503 (40%), Gaps = 80/503 (15%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
V D T N ++ FC + +A ++ M + PD +I GL R +++ A
Sbjct: 205 VTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAH 264
Query: 173 KVLQIMVMSGG--VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
VL M+ P+ ++Y +V G C + +I A+ + +M G +P+ +TYNT+++
Sbjct: 265 NVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIK 324
Query: 231 ----------------------TMF---------------DNGKFKQAIGFWKDQLRKGC 253
T F D G A+ +++ L
Sbjct: 325 GLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKL 384
Query: 254 PPYLITYTILIEQVCKQCGIARAIEVLDDM-------AIEGCSPDIVTYNSLVNFSCKQG 306
P +Y++LI +C + RA + +++ + C P YN + + C G
Sbjct: 385 HPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANG 444
Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
K A V L+ RG++ + +Y TL+ G + ++L +M P + TY
Sbjct: 445 KTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYE 503
Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
+LI+GL K G A ++ +M+ + P T+++VL L K NE+ L+ L+
Sbjct: 504 LLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEK 563
Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG--ISPDDI---------------- 468
+ ++ L EKA ++ + +NG + +++
Sbjct: 564 RIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTL 623
Query: 469 --------------THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
T T+I G C+ + EA L E+ + GN + S + ++ + L
Sbjct: 624 VLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEA 683
Query: 515 SKKVDMAIQVLELMISSRYKPDD 537
+ K + +Q + +++ + DD
Sbjct: 684 AGKWE-ELQFVSKRMATLRESDD 705
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 208/395 (52%)
Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
A VL ++ G PDT T+N ++ GL G++ A+ L+D M +GC+PDV+TYN+I+
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
+ +G A+ + + + TY+ +I+ +C+ I AI + +M +G
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
+VTYNSLV CK GK++D L++ +++SR + PN IT+N LL G +++
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
M SP + TYN L++G C + A N + MV C PDIVT+ +++ C
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
+++ +++ ++ +TY+ L+ G + G ++ A L+ +M+ +G+ PD +T+
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
L+ G C ++E+A+++ +++ K + Y +I G+CK KV+ A + +
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501
Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
KP+ ++ ++ + G EA L +K+ E
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Score = 202 bits (515), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 128/404 (31%), Positives = 198/404 (49%), Gaps = 4/404 (0%)
Query: 113 VEN----DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
VEN D T N I+ C G + A L+ M RN D +I L R I
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
+ A + + M G +TYN +V GLCK G+ LL +M P+VIT+N +
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
L GK ++A +K+ + +G P +ITY L++ C Q ++ A +LD M C
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
SPDIVT+ SL+ C + DD + V N+ RG+ N++TY+ L+ G ++
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
+ M P V TY IL++GLC G +++A+ F + IV Y T++ +C
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
K G + +A L L P ++TY +I GL KKG + +A +L +M E+G +P+D
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544
Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
T+ TLI R + + L++E+ G S+ ++VI L
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 124/445 (27%), Positives = 221/445 (49%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T N ++ FC K A ++ + + PD LI+GL ++ +A ++ M
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
V +G PD +TYN +V G+C+ G A+ LL +M + DV TY+TI+ ++ +G
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
AI +K+ KG ++TY L+ +CK +L DM P+++T+N L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
++ K+GK +A + +++RG+ PN ITYNTL+ + + +LD+M
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
SP + T+ LI G C VD + F + + + VTY+ ++ C+ G + A +
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
L + P ++TY L+DGL G +EKA+ ++ + ++ + + + T+I G C
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
+ +VE+A +L + +G K Y ++I GLCK + A +L M P+D
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544
Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
++T+++ DG + KL +++
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 228/435 (52%), Gaps = 6/435 (1%)
Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI---MVMSGGVPDTI 188
K DA L M R +P ++ R I R ++ + VL + ++G +
Sbjct: 68 KKDDAIALFQEMIRSRPLPSL---VDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIY 124
Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
T N+M+ C+ + A ++L ++ G EPD T+NT+++ +F GK +A+
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
+ GC P ++TY ++ +C+ + A+++L M D+ TY+++++ C+ G
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
D A+ + + ++G++ + +TYN+L+ L G W+ +L M P V T+N+L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
++ K G + A + +M+++ P+I+TYNT++ C + L+EA +L L+ + C
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
SP ++T+ +LI G ++ M ++ + + G+ + +T+ L+ GFC++ +++ A +
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
L +E+ G Y +++ GLC + K++ A+++ E + S+ +++TI++ +
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 549 DDGMTEEAYKLWQKL 563
G E+A+ L+ L
Sbjct: 485 KGGKVEDAWNLFCSL 499
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 215/431 (49%)
Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
E D T N +++ GK+++A L+D M PD +++ G+ R A
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
+L+ M D TY+ ++ LC+ G I +AI+L EM G + V+TYN+++R +
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
GK+ KD + + P +IT+ +L++ K+ + A E+ +M G SP+I+
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
TYN+L++ C Q + +A +++ ++ P+ +T+ +L+ D K+ +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
++ TY+IL+ G C+ G + A F +MVS PD++TY +L LC G L
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
+AL++ L S ++ Y T+I+G+ K G +E A L+ + G+ P+ +T+ +
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514
Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
I G C+ + EA LL+++ + GN + Y +I + + + +++E M S +
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Query: 534 KPDDTVFSTIV 544
D + ++
Sbjct: 575 SADASSIKMVI 585
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 178/368 (48%), Gaps = 12/368 (3%)
Query: 197 LCKRGQIRSAIALLDEMSVSGCEPDV-------ITYNTILRTMFDNGKFKQAIGFWKDQL 249
L K G +R+ + S CE D + + LR+ + K AI +++ +
Sbjct: 21 LLKTGSLRTDLLCTISSFFSSCERDFSSISNGNVCFRERLRSGIVDIKKDDAIALFQEMI 80
Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
R P L+ ++ + + ++ + + G + +I T N ++N C+ K
Sbjct: 81 RSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTC 140
Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
A V+ ++ G EP++ T+NTL+ L G ++D M E P V TYN ++
Sbjct: 141 FAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIV 200
Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
NG+C+ G A++ +M +N + D+ TY+T++ +LC++G ++ A+ L +
Sbjct: 201 NGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 260
Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
++TYN+L+ GL K G +L M+ I P+ IT L+ F + +++EA +L
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320
Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK---- 545
KE+ RG Y ++ G C ++ A +L+LM+ ++ PD F++++K
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380
Query: 546 -KVADDGM 552
K DDGM
Sbjct: 381 VKRVDDGM 388
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 145/272 (53%), Gaps = 4/272 (1%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T N ++ +C + +L++A+ ++D+M R PD +LI+G + R++ KV + +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
G V + +TY+++V G C+ G+I+ A L EM G PDV+TY +L + DNGK
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
++A+ ++D + ++ YT +IE +CK + A + + +G P+++TY +
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
++ CK+G +A +++ + G PN TYNTL+ + G A K+++ M
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
S + ++I+ L G +D+ SF M+S
Sbjct: 575 SADASSIKMVIDMLLS-GELDK---SFLDMLS 602
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 158/329 (48%), Gaps = 2/329 (0%)
Query: 81 ESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVE--NDEKTNNKILQNFCSRGKLTDASK 138
+S V+ N +RGL K +D +L D E + T N +L F GKL +A++
Sbjct: 260 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319
Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
L M R P+ L+ G +R+ +A+ +L +MV + PD +T+ ++ G C
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379
Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
++ + + +S G + +TY+ +++ +GK K A +++ + G P ++
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
TY IL++ +C + +A+E+ +D+ IV Y +++ CK GK +DA + +L
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
+G++PN +TY ++ L +G + +L M E ++P TYN LI + G +
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559
Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
+ +M S D + V+ L
Sbjct: 560 TASAKLIEEMKSCGFSADASSIKMVIDML 588
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/388 (31%), Positives = 201/388 (51%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
+ +D + ++ FC +L+ A + M + P +L+ G ++R +A
Sbjct: 110 ISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAM 169
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
++ +V G P+ + YN ++ LC++GQ+ +A+ +L M G PDV+TYN+++ +
Sbjct: 170 SLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRL 229
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
F +G + + D +R G P +IT++ LI+ K+ + A + ++M +P+I
Sbjct: 230 FHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNI 289
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
VTYNSL+N C G D+A V+N L+S+G PN++TYNTL++ D KIL +
Sbjct: 290 VTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCV 349
Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
M+ FTYN L G C+ G A +MVS PD+ T+N +L LC G
Sbjct: 350 MSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGK 409
Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
+ +AL L L S +ITYN +I GL K +E A L+ + G+SPD IT+ T
Sbjct: 410 IGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYIT 469
Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKM 500
++ G R EA +L +++ K M
Sbjct: 470 MMIGLRRKRLWREAHELYRKMQKEDGLM 497
Score = 192 bits (487), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 221/435 (50%), Gaps = 6/435 (1%)
Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI---MVMSGGVPDTI 188
K DA L MA + +P ++ R LI I ++ K V+ + + M G D
Sbjct: 59 KFNDALTLFCDMAESHPLPSI---VDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLY 115
Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
++ ++ C+ ++ A++ L +M G EP ++T+ +++ +F +A+
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175
Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
+ G P ++ Y +I+ +C++ + A++VL M G PD+VTYNSL+ G +
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235
Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
+ ++++++ G+ P+ IT++ L+ G G K + M + S +P + TYN L
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295
Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
INGLC +GL+D A N +VSK P+ VTYNT++ CK +++ +++L +++
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355
Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
TYNTL G + G A + G+M+ G+ PD T L+ G C ++ +A+
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALV 415
Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
L+++ K + Y ++I GLCK+ KV+ A + + PD + T++ +
Sbjct: 416 RLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLR 475
Query: 549 DDGMTEEAYKLWQKL 563
+ EA++L++K+
Sbjct: 476 RKRLWREAHELYRKM 490
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 168/344 (48%)
Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
Y LR+ + KF A+ + D P ++ ++ L+ + K I + +
Sbjct: 47 YRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE 106
Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
+ G S D+ ++ +L++ C+ + A+ + ++ G EP+ +T+ +L++ +
Sbjct: 107 MLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFY 166
Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
++D + + P V YN +I+ LC+ G V+ A++ M +PD+VTYN+++
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
L G + ++L + SP +IT++ LID K+G + +A Y +M++ ++
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
P+ +T+ +LI G C ++EA +L + +G Y +I+G CK+K+VD +++
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKI 346
Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
L +M D ++T+ + G A K+ +++ V
Sbjct: 347 LCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGV 390
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 198/396 (50%)
Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
LI+G IEK+ +L + G P+ + Y ++ G CK+G+I A L EM G
Sbjct: 169 LIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLG 228
Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
+ TY ++ +F NG KQ ++ G P L TY ++ Q+CK A
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAF 288
Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
+V D+M G S +IVTYN+L+ C++ K ++A V++ + S G+ PN ITYNTL+
Sbjct: 289 QVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF 348
Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
G + + SP++ TYNIL++G C+ G A +M + +P
Sbjct: 349 CGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408
Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
VTY ++ + + +A+QL + P + TY+ LI G KG M +A L+
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468
Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
M+E P+++ + T+I G+C+ A+ LLKE+ ++ ++YR +I LCK +K
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528
Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
A +++E MI S P ++ S I + D ++
Sbjct: 529 SKEAERLVEKMIDSGIDPSTSILSLISRAKNDSHVS 564
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 197/382 (51%)
Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
V D ++ +++ G C+ G+I + LL E++ G P+V+ Y T++ G+ ++A
Sbjct: 160 VLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKD 219
Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
+ + + G TYT+LI + K + E+ + M +G P++ TYN ++N C
Sbjct: 220 LFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLC 279
Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
K G+ DA V + + RG+ N +TYNTL+ L + +K++D M +P +
Sbjct: 280 KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLI 339
Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
TYN LI+G C G + +A++ + S+ P +VTYN ++ C++G + A +++ +
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399
Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
P +TY LID A+ MEKA+ L M E G+ PD T+ LI GFC Q+
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQM 459
Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
EA L K + ++ + Y +I G CK A+++L+ M P+ + +
Sbjct: 460 NEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYM 519
Query: 544 VKKVADDGMTEEAYKLWQKLIE 565
++ + + ++EA +L +K+I+
Sbjct: 520 IEVLCKERKSKEAERLVEKMID 541
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 191/376 (50%), Gaps = 1/376 (0%)
Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
Y +++ + + +I+ +EM +G P +N +L + + F Q F+ +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
K + ++ ILI+ C+ I ++ ++L ++ G SP++V Y +L++ CK+G+ +
Sbjct: 157 SKVVLD-VYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
A + + G+ N TY L++ L G ++ + M E P ++TYN ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
N LCK G A F++M + +IVTYNT++G LC+E LNEA +++ + +
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
P LITYNTLIDG G + KA+ L + G+SP +T+ L+ GFCR A +
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
+KE+ +RG K Y ++I +S ++ AIQ+ M PD +S ++
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 550 DGMTEEAYKLWQKLIE 565
G EA +L++ ++E
Sbjct: 456 KGQMNEASRLFKSMVE 471
Score = 176 bits (445), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 191/375 (50%)
Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
+++ C G++ + L+ + P+ LI G + IEKA + M G
Sbjct: 169 LIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLG 228
Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
V + TY +++ GL K G + + ++M G P++ TYN ++ + +G+ K A
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAF 288
Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
+ + +G ++TY LI +C++ + A +V+D M +G +P+++TYN+L++
Sbjct: 289 QVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF 348
Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
C GK A+ + +L SRG+ P+ +TYN L+ +G K++ M E P+
Sbjct: 349 CGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408
Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
TY ILI+ + +++AI M PD+ TY+ ++ C +G +NEA +L
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468
Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
+ +C P + YNT+I G K+G +A+ L +M E ++P+ ++R +I C+ +
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528
Query: 483 VEEAVDLLKEIGKRG 497
+EA L++++ G
Sbjct: 529 SKEAERLVEKMIDSG 543
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 150/315 (47%)
Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
+E+T ++ G ++ + M P+ + ++ L + R + A +V
Sbjct: 232 NERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVF 291
Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
M G + +TYN ++GGLC+ ++ A ++D+M G P++ITYNT++
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV 351
Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
GK +A+ +D +G P L+TY IL+ C++ + A +++ +M G P VTY
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
L++ + + A+ + ++ G+ P+ TY+ L+H +G + ++ M E
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471
Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
+ P YN +I G CK G RA+ +M K P++ +Y ++ LCKE E
Sbjct: 472 KNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKE 531
Query: 416 ALQLLHLLNGSSCSP 430
A +L+ + S P
Sbjct: 532 AERLVEKMIDSGIDP 546
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 110/221 (49%), Gaps = 2/221 (0%)
Query: 349 ILDIMNEASHSPTVFT-YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
+L + E+ S T F Y ++IN + ++ +I+ FN+MV P +N +L +
Sbjct: 80 LLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFV 139
Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
N+ + N S + ++ LI G + G +EK+ L ++ E G SP+
Sbjct: 140 VGSSSFNQWWSFFN-ENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNV 198
Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
+ + TLI G C+ ++E+A DL E+GK G Y ++I+GL K+ ++ E
Sbjct: 199 VIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEK 258
Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
M P+ ++ ++ ++ DG T++A++++ ++ E V
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGV 299
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 221/451 (49%), Gaps = 1/451 (0%)
Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARR-NQIPDFHFCINLIRGLIRIDRIEKASKV 174
D +L FC L DA K+ D+M++ P+ LI GL + R+E+A +
Sbjct: 229 DSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGL 288
Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
M G P T TY +++ LC RG I A L DEM GC+P+V TY ++ +
Sbjct: 289 KDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCR 348
Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
+GK ++A G + ++ P +ITY LI CK + A E+L M C P++ T
Sbjct: 349 DGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRT 408
Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
+N L+ C+ GK AV ++ +L G+ P+ ++YN L+ L G + K+L MN
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN 468
Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
P T+ +IN CK G D A M+ K D VT T++ +CK G
Sbjct: 469 CFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTR 528
Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
+AL +L L + N ++D L+K +++ + + G++ + G+ P +T+ TL+
Sbjct: 529 DALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLV 588
Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
G R+ + + +L+ + G Y ++I+GLC+ +V+ A ++L M S
Sbjct: 589 DGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648
Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
P+ ++ +VK ++G + A + + ++E
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVE 679
Score = 191 bits (486), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 216/429 (50%), Gaps = 42/429 (9%)
Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTILR 230
SK+L+I G V D+ ++ G C+ +R A+ + D MS C P+ ++Y+ ++
Sbjct: 219 SKILKI----GFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIH 274
Query: 231 TMFDNGKFKQAIGFWKDQL-RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
+ + G+ ++A G KDQ+ KGC P TYT+LI+ +C + I +A + D+M GC
Sbjct: 275 GLCEVGRLEEAFGL-KDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCK 333
Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
P++ TY L++ C+ GK ++A V ++ + P+ ITYN L++ G ++
Sbjct: 334 PNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFEL 393
Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
L +M + + P V T+N L+ GLC+ G +A++ +M+ PDIV+YN ++ LC+
Sbjct: 394 LTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCR 453
Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
EG +N A +LL +N P +T+ +I+ K+G + A G M+ GIS D++T
Sbjct: 454 EGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVT 513
Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGK------------------RGNKMRNS-------- 503
TLI G C+ + +A+ +L+ + K +G K++
Sbjct: 514 GTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKIN 573
Query: 504 ---------AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
Y ++ GL +S + + ++LELM S P+ ++ I+ + G E
Sbjct: 574 KLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVE 633
Query: 555 EAYKLWQKL 563
EA KL +
Sbjct: 634 EAEKLLSAM 642
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 233/470 (49%), Gaps = 18/470 (3%)
Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
+T +++ C RG + A L D M R P+ H LI GL R +IE+A+ V +
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361
Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
MV P ITYN ++ G CK G++ A LL M C+P+V T+N ++ + GK
Sbjct: 362 MVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
+A+ K L G P +++Y +LI+ +C++ + A ++L M PD +T+ +
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTA 481
Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
++N CKQGK D A + +L +G+ + +T TL+ + G IL+ + +
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541
Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
T + N++++ L K V + ++ P +VTY T++ L + G + +
Sbjct: 542 ILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSF 601
Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
++L L+ S C P + Y +I+GL + G +E+A L M ++G+SP+ +T+ ++ G+
Sbjct: 602 RILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661
Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK-VDMAIQVLELMISSRYKPD 536
+++ A++ ++ + +RG ++ + Y ++ G S+K +D + + I+ R
Sbjct: 662 VNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDP 721
Query: 537 DTVFSTI-----------------VKKVADDGMTEEAYKLWQKLIEWKVF 569
+ + I V ++ +G T+E+ L Q ++E VF
Sbjct: 722 ECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVF 771
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 182/358 (50%), Gaps = 1/358 (0%)
Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
M G +I Y TI+ + NG + A F L+ G T L+ C+
Sbjct: 186 MEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLN 245
Query: 273 IARAIEVLDDMAIE-GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
+ A++V D M+ E C+P+ V+Y+ L++ C+ G+ ++A + + + +G +P++ TY
Sbjct: 246 LRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305
Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
L+ +L RG D + D M P V TY +LI+GLC+ G ++ A +MV
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365
Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
P ++TYN ++ CK+G + A +LL ++ +C P + T+N L++GL + G KA
Sbjct: 366 RIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
+ L +M++NG+SPD +++ LI G CR + A LL + + + +I+
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINA 485
Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
CK K D+A L LM+ D+ +T++ V G T +A + + L++ ++
Sbjct: 486 FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRIL 543
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 114/471 (24%), Positives = 210/471 (44%), Gaps = 63/471 (13%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T N ++ +C G++ A +L+ +M +R P+ L+ GL R+ + KA +L+ M
Sbjct: 373 TYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRM 432
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
+ +G PD ++YN+++ GLC+ G + +A LL M+ EPD +T+ I+ GK
Sbjct: 433 LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKA 492
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD----------------- 281
A F LRKG +T T LI+ VCK A+ +L+
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVI 552
Query: 282 -DMAIEGCS-----------------PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
DM +GC P +VTY +LV+ + G + ++ + G
Sbjct: 553 LDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC 612
Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
PN Y +++ L G + +K+L M ++ SP TY +++ G G +DRA+
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672
Query: 384 SFNQMVSKNCQPDIVTYNTVLGA--LCKEGM--------------------LNEALQLLH 421
+ MV + + + Y+++L L ++G+ +NE + ++
Sbjct: 673 TVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVE 732
Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
L G C+ L+ L K+G +++ L ++E G+ + ++ +C
Sbjct: 733 QLGGCISGLCIF----LVTRLCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESYCSKK 787
Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ-VLELMISS 531
+ + ++L+ + K G ++ LVI GL K + A + V+EL+ S+
Sbjct: 788 KHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSN 838
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 165/373 (44%), Gaps = 26/373 (6%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
+E D T I+ FC +GK AS + +M R+ D LI G+ ++ + A
Sbjct: 472 IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL 531
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
+L+ +V + + N+++ L K +++ +A+L +++ G P V+TY T++ +
Sbjct: 532 FILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGL 591
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
+G + + GC P + YTI+I +C+ + A ++L M G SP+
Sbjct: 592 IRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS--LGSRGCWDAVDKIL 350
VTY +V GK D A+ + ++ RG E N Y++LL L +G ++ + +
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTV 711
Query: 351 DIMNEASHSPTVFTYNI----------------LINGLCKYGLVDRAINSFNQMVSKNCQ 394
+ P I L+ LCK G D + N +V +
Sbjct: 712 SDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDES----NDLVQNVLE 767
Query: 395 PDIV---TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
+ + ++ + C + + ++L+ L+ S P ++ +I GL K+G E+A
Sbjct: 768 RGVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERA 827
Query: 452 MVLYGQMM-ENGI 463
L +++ NG+
Sbjct: 828 RELVMELLTSNGV 840
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 103/213 (48%), Gaps = 15/213 (7%)
Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG-------MLNEAL 417
Y+ L+ L K L A ++ +M + ++ Y T++ ALCK G +++ L
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM-MENGISPDDITHRTLIWG 476
++ +L+ +L+ G + + A+ ++ M E +P+ +++ LI G
Sbjct: 223 KIGFVLDSH-------IGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHG 275
Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
C ++EEA L ++G++G + Y ++I LC +D A + + MI KP+
Sbjct: 276 LCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPN 335
Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
++ ++ + DG EEA + +K+++ ++F
Sbjct: 336 VHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIF 368
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 211/449 (46%), Gaps = 1/449 (0%)
Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
++ N +L F GK D + M P +I + + +E A + +
Sbjct: 228 RSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEE 287
Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
M G VPDT+TYN M+ G K G++ + +EM CEPDVITYN ++ GK
Sbjct: 288 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 347
Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
+ F+++ G P +++Y+ L++ CK+ + +AI+ DM G P+ TY S
Sbjct: 348 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 407
Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
L++ +CK G DA + N +L G+E N +TY L+ L +++ M+ A
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 467
Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
P + +YN LI+G K +DRA+ N++ + +PD++ Y T + LC + A
Sbjct: 468 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK 527
Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
+++ + + Y TL+D K G + + L +M E I +T LI G
Sbjct: 528 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587
Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSA-YRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
C+ V +AVD I N+A + +I GLCK +V+ A + E M+ PD
Sbjct: 588 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 647
Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
T +++++ G EA L K+ E
Sbjct: 648 RTAYTSLMDGNFKQGNVLEALALRDKMAE 676
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/483 (24%), Positives = 219/483 (45%), Gaps = 36/483 (7%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T N ++ C G + A L + M R +PD ++I G ++ R++ + M
Sbjct: 264 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 323
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
PD ITYN ++ CK G++ + EM +G +P+V++Y+T++ G
Sbjct: 324 KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 383
Query: 239 KQAIGFWKDQLRKGCPPY-----------------------------------LITYTIL 263
+QAI F+ D R G P ++TYT L
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 443
Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
I+ +C + A E+ M G P++ +YN+L++ K D A+ ++N L RG+
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503
Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
+P+ + Y T + L S +A +++ M E Y L++ K G ++
Sbjct: 504 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH 563
Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL-NGSSCSPCLITYNTLIDGL 442
++M + + +VT+ ++ LCK ++++A+ + + N + +IDGL
Sbjct: 564 LLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGL 623
Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
K +E A L+ QM++ G+ PD + +L+ G + V EA+ L ++ + G K+
Sbjct: 624 CKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDL 683
Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
AY ++ GL ++ A LE MI PD+ + +++KK + G +EA +L
Sbjct: 684 LAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSY 743
Query: 563 LIE 565
L++
Sbjct: 744 LMK 746
Score = 165 bits (418), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 202/454 (44%), Gaps = 38/454 (8%)
Query: 149 IPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
+P F L LI + +E+A + M P T + N ++ K G+
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
+M +G P V TYN ++ M G + A G +++ +G P +TY +I+
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308
Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
K + + ++M C PD++TYN+L+N CK GK + + G++PN +
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 368
Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
+Y+TL+ + G K M P +TY LI+ CK G + A N+M
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
+ + ++VTY ++ LC + EA +L ++ + P L +YN LI G K M
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488
Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA---VDLLKEIGKRGNKMRNS-- 503
++A+ L ++ GI PD + + T IWG C +++E A ++ +KE G + N + +
Sbjct: 489 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 548
Query: 504 ------------------------------AYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
+ ++I GLCK+K V A+ IS+ +
Sbjct: 549 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN-RISNDF 607
Query: 534 --KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
+ + +F+ ++ + D E A L++++++
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQ 641
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 145/330 (43%), Gaps = 35/330 (10%)
Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
R C P + L + + AI+ M P + N L++ K GK D
Sbjct: 185 RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD 244
Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
D +++ G P TYN ++ + G +A + + M P TYN +I
Sbjct: 245 DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 304
Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
+G K G +D + F +M C+PD++TYN ++ CK G L L+ + G+
Sbjct: 305 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 364
Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI--------------- 474
P +++Y+TL+D K+G M++A+ Y M G+ P++ T+ +LI
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 475 ----------W----------GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
W G C A++++EA +L ++ G ++Y +IHG K
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
+K +D A+++L + KPD ++ T +
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 142/308 (46%), Gaps = 1/308 (0%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
VE + T ++ C ++ +A +L M IP+ LI G ++ +++A
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
++L + G PD + Y + GLC +I +A +++EM G + + + Y T++
Sbjct: 493 ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 552
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE-GCSPD 291
F +G + + + ++T+ +LI+ +CK +++A++ + ++ + G +
Sbjct: 553 FKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQAN 612
Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
+ ++++ CK + + A + ++ +G+ P+ Y +L+ +G + D
Sbjct: 613 AAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRD 672
Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
M E + Y L+ GL + +A + +M+ + PD V +VL + G
Sbjct: 673 KMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELG 732
Query: 412 MLNEALQL 419
++EA++L
Sbjct: 733 CIDEAVEL 740
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 230/454 (50%), Gaps = 6/454 (1%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
V D T N IL+ +G+L+D +L+ M + +P+ NL+ G ++ +++A
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAF 295
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
+++++M + +PD TYN+++ GLC G +R + L+D M +PDV+TYNT++
Sbjct: 296 QIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGC 355
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC---GIARAIEVLDDMAIEGCS 289
F+ G +A + G +T+ I ++ +CK+ + R ++ L DM G S
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDM--HGFS 413
Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
PDIVTY++L+ K G A+ ++ + +G++ N+IT NT+L +L D +
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL 473
Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
L+ ++ TY LI G + V++A+ +++M P + T+N+++G LC
Sbjct: 474 LNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCH 533
Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
G A++ L S P T+N++I G K+G +EKA Y + +++ PD+ T
Sbjct: 534 HGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593
Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
L+ G C+ E+A++ + + ++ Y +I CK KK+ A +L M
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLIEE-REVDTVTYNTMISAFCKDKKLKEAYDLLSEME 652
Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
+PD +++ + + +DG E +L +K
Sbjct: 653 EKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/447 (28%), Positives = 220/447 (49%), Gaps = 5/447 (1%)
Query: 124 LQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR---IEKASKVLQIMVM 180
L + GK A ++ M R P+ C L+ GL+R I A +V MV
Sbjct: 138 LSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVK 197
Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFDNGKFK 239
G + T+N++V G C G++ A+ +L+ M S PD +TYNTIL+ M G+
Sbjct: 198 IGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLS 257
Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
D + G P +TY L+ CK + A ++++ M PD+ TYN L+
Sbjct: 258 DLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILI 317
Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
N C G + + +++ + S ++P+ +TYNTL+ G K+++ M
Sbjct: 318 NGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVK 377
Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKN-CQPDIVTYNTVLGALCKEGMLNEALQ 418
T+NI + LCK + ++V + PDIVTY+T++ A K G L+ AL+
Sbjct: 378 ANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALE 437
Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
++ + IT NT++D L K+ +++A L + G D++T+ TLI GF
Sbjct: 438 MMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFF 497
Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
R ++VE+A+++ E+ K S + +I GLC K ++A++ + + S PDD+
Sbjct: 498 REEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDS 557
Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
F++I+ +G E+A++ + + I+
Sbjct: 558 TFNSIILGYCKEGRVEKAFEFYNESIK 584
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 183/389 (47%), Gaps = 40/389 (10%)
Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLIT-YTILIEQV--CKQCGIARA 276
P ++ L GK A+ ++ +R P L+T T+LI V I+ A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR-GMEPNSITYNTLLH 335
EV DDM G S ++ T+N LVN C +GK +DA+ ++ ++S + P+++TYNT+L
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
++ +G + ++L M + P TYN L+ G CK G + A M N P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
D+ TYN ++ LC G + E L+L+ + P ++TYNTLIDG + G +A L
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 456 GQMMENGI------------------------------------SPDDITHRTLIWGFCR 479
QM +G+ SPD +T+ TLI + +
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428
Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
+ A+++++E+G++G KM ++ LCK +K+D A +L + D+
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488
Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
+ T++ + E+A ++W ++ + K+
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKI 517
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 152/317 (47%), Gaps = 8/317 (2%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASK----LIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
V+ ++ T+N L+ C K ++ L+D+ I +H LI+ +++ +
Sbjct: 376 VKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYH---TLIKAYLKVGDL 432
Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
A ++++ M G +TIT N ++ LCK ++ A LL+ G D +TY T+
Sbjct: 433 SGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTL 492
Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
+ F K ++A+ W + + P + T+ LI +C A+E D++A G
Sbjct: 493 IMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGL 552
Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
PD T+NS++ CK+G+ + A N + +P++ T N LL+ L G +
Sbjct: 553 LPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALN 612
Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
+ + E TV TYN +I+ CK + A + ++M K +PD TYN+ + L
Sbjct: 613 FFNTLIEEREVDTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLM 671
Query: 409 KEGMLNEALQLLHLLNG 425
++G L+E +LL +G
Sbjct: 672 EDGKLSETDELLKKFSG 688
>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein At2g32630
OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1
Length = 624
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 215/457 (47%), Gaps = 35/457 (7%)
Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
+ + + G + ++ D M ++ D CI + + RI+ ++ + MV SG
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSG 219
Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
+ ++V GLC+RG++ + L+ E SV G +P+ TYNTI+ F
Sbjct: 220 VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVE 279
Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
G K + G +TYT+L+E K ++ A ++ D+M G D+ Y SL++++
Sbjct: 280 GVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWN 339
Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
C++G A L+ + L +G+ P+S TY L+ + G A + +++ M + T
Sbjct: 340 CRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQ 399
Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV------------------- 403
+N LI+G C+ G+VD A ++ M K Q D+ T NT+
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFR 459
Query: 404 ----------------LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
+ CKEG + EA +L ++ P ITYN +I K+G
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
+++A L M NG+ PD T+ +LI G C AD V+EA+ L E+G +G + Y +
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 579
Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
+I GL K+ K D A + + M Y D+ V++ ++
Sbjct: 580 MISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 145/299 (48%), Gaps = 8/299 (2%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
+E+D ++ C +G + A L D + + P + LI G+ ++ + A+
Sbjct: 325 IESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEM-GAA 383
Query: 173 KVLQIMVMSGGVPDT-ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
++L + S GV T + +N ++ G C++G + A + D M G + DV T NTI
Sbjct: 384 EILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASC 443
Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
++ +A + + G ++YT LI+ CK+ + A + +M+ +G P+
Sbjct: 444 FNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPN 503
Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
+TYN ++ CKQGK +A + N+ + GM+P+S TY +L+H D VD+ +
Sbjct: 504 AITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIH---GECIADNVDEAMR 560
Query: 352 IMNE---ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
+ +E TY ++I+GL K G D A +++M K D Y ++G++
Sbjct: 561 LFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 2/220 (0%)
Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
N ++ +C +G + +AS + D+M ++ D C + R+ R ++A + L M M
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM-M 461
Query: 181 SGGVP-DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
GGV T++Y ++ CK G + A L EMS G +P+ ITYN ++ GK K
Sbjct: 462 EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 521
Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
+A + G P TYT LI C + A+ + +M ++G + VTY ++
Sbjct: 522 EARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMI 581
Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
+ K GK D+A + + + +G ++ Y L+ S+ S
Sbjct: 582 SGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMHS 621
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 84/190 (44%)
Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
G+ + + F+ MV K D + L A K ++ L++ + S + +
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
+++GL ++G +EK+ L + GI P+ T+ T+I + + +LK + K
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK 287
Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
G Y L++ K+ K+ A ++ + M + D V+++++ G +
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKR 347
Query: 556 AYKLWQKLIE 565
A+ L+ +L E
Sbjct: 348 AFLLFDELTE 357
>sp|Q9SZ20|PP339_ARATH Pentatricopeptide repeat-containing protein At4g26800
OS=Arabidopsis thaliana GN=At4g26800 PE=2 SV=2
Length = 514
Score = 202 bits (513), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 131/444 (29%), Positives = 227/444 (51%), Gaps = 20/444 (4%)
Query: 132 KLTDASKLIDIMARRNQIP---DFHFCINLIRGLIRID-------RIEKASKVLQIMVMS 181
K DA L +MA +P +F+ + I + D RIE A + +I
Sbjct: 65 KFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGI-EI---- 119
Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
PD T N++V C+ Q SA++ L +M G EPD++T ++++ + K A
Sbjct: 120 --SPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDA 177
Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
+ + G ++ TILI+ +CK + A+EVL M G SP++VTY+SL+
Sbjct: 178 VYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITG 237
Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
CK G+ DA ++ + S+ + PN IT++ L+ + RG VD + +M + S P
Sbjct: 238 LCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPN 297
Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
VFTY+ LI GLC + VD AI + M+SK C P++VTY+T+ K +++ ++LL
Sbjct: 298 VFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLD 357
Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
+ + ++ NTLI G + G ++ A+ ++G M NG+ P+ ++ ++ G
Sbjct: 358 DMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANG 417
Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
+VE+A+ + + K N + Y ++IHG+CK+ V A + + R +PD ++
Sbjct: 418 EVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYT 477
Query: 542 TIVKKVADDGMTEEA---YKLWQK 562
++ ++ GM EA + +QK
Sbjct: 478 IMIAELNRAGMRTEADALNRFYQK 501
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 164/339 (48%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
+E D T + ++ FC + DA + M + D LI L + + A
Sbjct: 154 IEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPAL 213
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
+VL+ M G P+ +TY+ ++ GLCK G++ A L EM P+VIT++ ++
Sbjct: 214 EVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAY 273
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
GK + +K ++ P + TY+ LI +C + AI++LD M +GC+P++
Sbjct: 274 AKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNV 333
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
VTY++L N K + DD + +++++ RG+ N+++ NTL+ G D +
Sbjct: 334 VTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGY 393
Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
M P + +YNI++ GL G V++A++ F M DI+TY ++ +CK M
Sbjct: 394 MTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACM 453
Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
+ EA L + L P Y +I L + G +A
Sbjct: 454 VKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 492
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 201/417 (48%), Gaps = 6/417 (1%)
Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCE--PDVI 223
+ + A + +M S +P + +N ++ + K I L + + G E PD+
Sbjct: 65 KFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLY 124
Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
T N ++ + A+ + ++ G P ++T + L+ C I A+ V M
Sbjct: 125 TCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQM 184
Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
G D+V L++ CK A+ V+ + RG+ PN +TY++L+ L G
Sbjct: 185 EKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRL 244
Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
++ L M+ +P V T++ LI+ K G + + + + M+ + P++ TY+++
Sbjct: 245 ADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSL 304
Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
+ LC ++EA+++L L+ C+P ++TY+TL +G K ++ + L M + G+
Sbjct: 305 IYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGV 364
Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
+ + ++ TLI G+ +A +++ A+ + + G +Y +V+ GL + +V+ A+
Sbjct: 365 AANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALS 424
Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV---FEKGTTLLA 577
E M +R D ++ ++ + M +EAY L+ KL +V F+ T ++A
Sbjct: 425 RFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIA 481
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 184/400 (46%), Gaps = 1/400 (0%)
Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
+ +++G + D T N ++ FC + + A + M + PD +L+ G
Sbjct: 111 IENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCL 170
Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
+ I+ A V M G D + +++ LCK + A+ +L M G P+V+T
Sbjct: 171 SNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVT 230
Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
Y++++ + +G+ A + K P +IT++ LI+ K+ +++ V M
Sbjct: 231 YSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMI 290
Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
P++ TY+SL+ C + D+A+ +++ ++S+G PN +TY+TL + D
Sbjct: 291 QMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVD 350
Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
K+LD M + + + N LI G + G +D A+ F M S P+I +YN VL
Sbjct: 351 DGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVL 410
Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
L G + +AL + + +ITY +I G+ K +++A L+ ++ +
Sbjct: 411 AGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVE 470
Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
PD + +I RA EA D L ++ + SA
Sbjct: 471 PDFKAYTIMIAELNRAGMRTEA-DALNRFYQKHVRQNESA 509
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 137/313 (43%), Gaps = 38/313 (12%)
Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
+ S + Y ++ K+DDA + + P+ + +N +L ++ +D
Sbjct: 43 VRAFSGTTIDYREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYD 102
Query: 345 AVDKILDIMNEASH---SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
V + + A SP ++T NIL+N C+ A++ +M+ +PDIVT +
Sbjct: 103 VVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTAS 162
Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
+++ C + +A+ + + ++ LID L K + A+ + +M +
Sbjct: 163 SLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDR 222
Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEI-------------------GKRGNKMR- 501
GISP+ +T+ +LI G C++ ++ +A L E+ KRG +
Sbjct: 223 GISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKV 282
Query: 502 NSAYRL---------------VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
+S Y++ +I+GLC +VD AI++L+LMIS P+ +ST+
Sbjct: 283 DSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANG 342
Query: 547 VADDGMTEEAYKL 559
++ KL
Sbjct: 343 FFKSSRVDDGIKL 355
Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 113/251 (45%), Gaps = 3/251 (1%)
Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
R +I Y +L S +D + +M + P++ +N ++ + K + D
Sbjct: 44 RAFSGTTIDYREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDV 103
Query: 381 AINSFNQMVSKN---CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
IN + ++ + PD+ T N ++ C+ + AL L + P ++T ++
Sbjct: 104 VINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASS 163
Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
L++G ++ A+ + GQM + GI D + LI C+ V A+++LK + RG
Sbjct: 164 LVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRG 223
Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
Y +I GLCKS ++ A + L M S + P+ FS ++ A G +
Sbjct: 224 ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVD 283
Query: 558 KLWQKLIEWKV 568
+++ +I+ +
Sbjct: 284 SVYKMMIQMSI 294
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/468 (28%), Positives = 223/468 (47%), Gaps = 30/468 (6%)
Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
N I+ +FC G+ D+ K+++ M +PD + I L + ++ AS++ M +
Sbjct: 221 NTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMEL 280
Query: 181 SGGV----PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
+ P++ITYN+M+ G CK G + A L + + + + +YN L+ + +G
Sbjct: 281 DEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHG 340
Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
KF +A K KG P + +Y IL++ +CK ++ A ++ M G PD VTY
Sbjct: 341 KFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYG 400
Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
L++ C GK D A ++ ++ PN+ T N LLHSL G +++L MNE
Sbjct: 401 CLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEK 460
Query: 357 SHSPTVFTYNILINGLCKYGLVDRAI------------------NSF-----NQMVSKNC 393
+ T NI+++GLC G +D+AI NS+ + ++ NC
Sbjct: 461 GYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNC 520
Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
PD++TY+T+L LCK G EA L + G P + YN I K+G + A
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFR 580
Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
+ M + G T+ +LI G +Q+ E L+ E+ ++G Y I LC
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLC 640
Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVK---KVADDGMTEEAYK 558
+ +KV+ A +L+ M+ P+ F +++ KV D M +E ++
Sbjct: 641 EGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE 688
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 135/457 (29%), Positives = 224/457 (49%), Gaps = 14/457 (3%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T N +L+ FC G L DA L + + + + ++GL+R + +A VL+ M
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQM 352
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
G P +YN+++ GLCK G + A ++ M +G PD +TY +L GK
Sbjct: 353 TDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKV 412
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
A ++ +R C P T IL+ + K I+ A E+L M +G D VT N +
Sbjct: 413 DAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNII 472
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
V+ C G+ D A+ ++ + G + L +LG+ + + D + E +
Sbjct: 473 VDGLCGSGELDKAIEIVKGMRVHG--------SAALGNLGN----SYIGLVDDSLIENNC 520
Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
P + TY+ L+NGLCK G A N F +M+ + QPD V YN + CK+G ++ A +
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFR 580
Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
+L + C L TYN+LI GL K + + L +M E GISP+ T+ T I C
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLC 640
Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
++VE+A +LL E+ ++ +++ +I CK DMA +V E +S +
Sbjct: 641 EGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI-CGQKEG 699
Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
++S + ++ G +A +L + +++ + FE GT L
Sbjct: 700 LYSLMFNELLAAGQLLKATELLEAVLD-RGFELGTFL 735
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 208/452 (46%), Gaps = 25/452 (5%)
Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
E ++ +N IL + + KL+ ++ I A+ N I L+R ++
Sbjct: 56 EEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENK------ 109
Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
P YN+++ K ++ L +M + G P T+N ++R +
Sbjct: 110 -----------PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALC 158
Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
D+ A + + KGC P T+ IL+ CK + +E+L+ M G P+ V
Sbjct: 159 DSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKV 218
Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
YN++V+ C++G+ DD+ ++ + G+ P+ +T+N+ + +L G +I M
Sbjct: 219 IYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM 278
Query: 354 NEASH----SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
+ P TYN+++ G CK GL++ A F + + + +YN L L +
Sbjct: 279 ELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVR 338
Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
G EA +L + P + +YN L+DGL K G + A + G M NG+ PD +T
Sbjct: 339 HGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVT 398
Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY--RLVIHGLCKSKKVDMAIQVLEL 527
+ L+ G+C +V+ A LL+E+ R N + N AY +++H L K ++ A ++L
Sbjct: 399 YGCLLHGYCSVGKVDAAKSLLQEM-MRNNCLPN-AYTCNILLHSLWKMGRISEAEELLRK 456
Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
M Y D + IV + G ++A ++
Sbjct: 457 MNEKGYGLDTVTCNIIVDGLCGSGELDKAIEI 488
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 191/418 (45%), Gaps = 30/418 (7%)
Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
D T +L +CS GK+ A L+ M R N +P+ + C L+ L ++ RI +A ++L
Sbjct: 395 DAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELL 454
Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG------------------ 217
+ M G DT+T N++V GLC G++ AI ++ M V G
Sbjct: 455 RKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDS 514
Query: 218 -----CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
C PD+ITY+T+L + G+F +A + + + + P + Y I I CKQ
Sbjct: 515 LIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGK 574
Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
I+ A VL DM +GC + TYNSL+ + + + +++ + +G+ PN TYNT
Sbjct: 575 ISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNT 634
Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
+ L + +LD M + + +P VF++ LI CK D A F VS
Sbjct: 635 AIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSIC 694
Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
Q + + Y+ + L G L +A +LL + Y L++ L KK +E A
Sbjct: 695 GQKEGL-YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVAS 753
Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL------LKEIGKRGNKMRNSA 504
+ +M++ G D +I G + +EA + +G+ NK+ +A
Sbjct: 754 GILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVANKVDPNA 811
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 112/276 (40%), Gaps = 37/276 (13%)
Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
G ++ D N + +FC +GK++ A +++ M ++
Sbjct: 552 GEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG---------------------- 589
Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
K L+ TYN ++ GL + QI L+DEM G P++ TYNT +
Sbjct: 590 -CHKSLE------------TYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAI 636
Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
+ + + K + A + ++K P + ++ LIE CK A EV + A+ C
Sbjct: 637 QYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSICG 695
Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
Y+ + N G+ A ++ +L RG E + Y L+ SL + + I
Sbjct: 696 QKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGI 755
Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
L M + + +I+GL K G A NSF
Sbjct: 756 LHKMIDRGYGFDPAALMPVIDGLGKMGNKKEA-NSF 790
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 217/436 (49%), Gaps = 3/436 (0%)
Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
C + +A + +M + P C +++ L R++RIE A M +
Sbjct: 166 CQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNV 225
Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
T+N+M+ LCK G+++ A L M V G +P ++TYNT+++ G+ + A +
Sbjct: 226 YTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISE 285
Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
KG P + TY ++ +C + RA EVL +M G PD V+YN L+ G
Sbjct: 286 MKSKGFQPDMQTYNPILSWMCNE---GRASEVLREMKEIGLVPDSVSYNILIRGCSNNGD 342
Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
+ A + ++ +GM P TYNTL+H L +A + ++ + E TYNI
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402
Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
LING C++G +A ++M++ QP TY +++ LC++ EA +L + G
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462
Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
P L+ NTL+DG G M++A L +M I+PDD+T+ L+ G C + EEA
Sbjct: 463 MKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAR 522
Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
+L+ E+ +RG K + +Y +I G K A V + M+S + P ++ ++K +
Sbjct: 523 ELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGL 582
Query: 548 ADDGMTEEAYKLWQKL 563
+ + E A +L +++
Sbjct: 583 SKNQEGELAEELLREM 598
Score = 186 bits (471), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 205/407 (50%), Gaps = 6/407 (1%)
Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
M ++ + F+ IN+ L + +++KA L IM + G P +TYN +V G RG+
Sbjct: 219 MEIKSNVYTFNIMINV---LCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
I A ++ EM G +PD+ TYN IL M + G+ + + K+ G P ++Y I
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEI---GLVPDSVSYNI 332
Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
LI + A D+M +G P TYN+L++ + K + A ++I + +G
Sbjct: 333 LIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 392
Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
+ +S+TYN L++ G + D M PT FTY LI LC+ A
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREAD 452
Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
F ++V K +PD+V NT++ C G ++ A LL ++ S +P +TYN L+ GL
Sbjct: 453 ELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGL 512
Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
+G E+A L G+M GI PD I++ TLI G+ + + A + E+ G
Sbjct: 513 CGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTL 572
Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
Y ++ GL K+++ ++A ++L M S P+D+ F ++++ +++
Sbjct: 573 LTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 201/409 (49%), Gaps = 5/409 (1%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
++++ T N ++ C GKL A + IM P L++G RIE A
Sbjct: 221 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGAR 280
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
++ M G PD TYN ++ +C G+ A +L EM G PD ++YN ++R
Sbjct: 281 LIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGC 337
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
+NG + A + + +++G P TY LI + + I A ++ ++ +G D
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 397
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
VTYN L+N C+ G A + + +++ G++P TY +L++ L + D++ +
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
+ P + N L++G C G +DRA + +M + PD VTYN ++ LC EG
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK 517
Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
EA +L+ + P I+YNTLI G +KKG + A ++ +M+ G +P +T+
Sbjct: 518 FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNA 577
Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK--SKKVD 519
L+ G + + E A +LL+E+ G +S++ VI + +KK D
Sbjct: 578 LLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLDAKKSD 626
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 184/377 (48%), Gaps = 3/377 (0%)
Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
TI ++++V C+ + AI M G P T N IL + + + A F+
Sbjct: 155 TILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYA 214
Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
D R + T+ I+I +CK+ + +A L M + G P IVTYN+LV +G
Sbjct: 215 DMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRG 274
Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
+ + A L+I+ + S+G +P+ TYN +L + + G ++L M E P +YN
Sbjct: 275 RIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYN 331
Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
ILI G G ++ A ++MV + P TYNT++ L E + A L+ +
Sbjct: 332 ILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 391
Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
+TYN LI+G + G +KA L+ +MM +GI P T+ +LI+ CR ++ EA
Sbjct: 392 GIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREA 451
Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
+L +++ +G K ++ G C +D A +L+ M PDD ++ +++
Sbjct: 452 DELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRG 511
Query: 547 VADDGMTEEAYKLWQKL 563
+ +G EEA +L ++
Sbjct: 512 LCGEGKFEEARELMGEM 528
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 114/242 (47%), Gaps = 8/242 (3%)
Query: 329 TYNTLLHSLGSRGC--WDAVDKILD---IMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
T +T+L L R C VD+ ++ +M E P T N ++ L + ++ A
Sbjct: 152 TKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWV 211
Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
+ M + ++ T+N ++ LCKEG L +A L ++ P ++TYNTL+ G +
Sbjct: 212 FYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFS 271
Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
+G +E A ++ +M G PD T+ ++ C + E + +KEIG + +
Sbjct: 272 LRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSV--- 328
Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
+Y ++I G + ++MA + M+ P ++T++ + + E A L +++
Sbjct: 329 SYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREI 388
Query: 564 IE 565
E
Sbjct: 389 RE 390
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 228/443 (51%), Gaps = 37/443 (8%)
Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
L+ +++ + A VL +M+ G + +N+++ GLC+ + A++LL EM +
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172
Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
PDV +YNT++R + + ++A+ + GC L+T+ ILI+ CK + A+
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
L +M G D+V Y SL+ C G+ D + + +L RG P +ITYNTL+
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292
Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
G +I + M E P V+TY LI+GLC G A+ N M+ K+ +P+
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNA 352
Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
VTYN ++ LCK+G++ +A++++ L+ P ITYN L+ GL KG +++A L
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412
Query: 458 MMENG--ISPDDITHRTLIWGFCRADQVEEAVD----LLKEIG---------------KR 496
M+++ PD I++ LI G C+ +++ +A+D L++++G K
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472
Query: 497 G--NK-------------MRNS-AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
G NK +RNS Y +I G CK+ +++A +L M S +P +
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDY 532
Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
+ ++ + +G ++A++L++++
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEM 555
Score = 198 bits (504), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 217/429 (50%), Gaps = 6/429 (1%)
Query: 120 NNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
+N +L+ C + A L+ M R + +PD +IRG +EKA ++ M
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
SG +T+ +++ CK G++ A+ L EM G E D++ Y +++R D G+
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
+ + + L +G P ITY LI CK + A E+ + M G P++ TY L+
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
+ C GK +A+ ++N ++ + EPN++TYN +++ L G +I+++M +
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384
Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMV--SKNCQPDIVTYNTVLGALCKEGMLNEAL 417
P TYNIL+ GLC G +D A M+ S PD+++YN ++ LCKE L++AL
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444
Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
+ LL + +T N L++ K G + KAM L+ Q+ ++ I + T+ +I GF
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504
Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSA--YRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
C+ + A LL ++ R ++++ S Y ++ LCK +D A ++ E M P
Sbjct: 505 CKTGMLNVAKGLLCKM--RVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP 562
Query: 536 DDTVFSTIV 544
D F+ ++
Sbjct: 563 DVVSFNIMI 571
Score = 191 bits (486), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 124/445 (27%), Positives = 216/445 (48%), Gaps = 2/445 (0%)
Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
++ FC GK+ +A + M D +LIRG +++ + ++ G
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
P ITYN ++ G CK GQ++ A + + M G P+V TY ++ + GK K+A+
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
+ K P +TY I+I ++CK +A A+E+++ M PD +TYN L+
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Query: 303 CKQGKYDDAVLVINNLL--SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
C +G D+A ++ +L S +P+ I+YN L+H L I D++ E +
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457
Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
T NIL+N K G V++A+ + Q+ + TY ++ CK GMLN A LL
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517
Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
+ S P + YN L+ L K+G +++A L+ +M + PD ++ +I G +A
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKA 577
Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
++ A LL + + G Y +I+ K +D AI + M+ S ++PD +
Sbjct: 578 GDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHIC 637
Query: 541 STIVKKVADDGMTEEAYKLWQKLIE 565
+++K G T++ +L +KL++
Sbjct: 638 DSVLKYCISQGETDKLTELVKKLVD 662
Score = 172 bits (435), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 202/423 (47%), Gaps = 2/423 (0%)
Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
NL+ L+R E A + M+ + + ++ + ++ + + A +L M
Sbjct: 77 NLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKR 136
Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
G +V +N +L+ + N + +A+ ++ R P + +Y +I C+ + +A
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
+E+ ++M GCS +VT+ L++ CK GK D+A+ + + G+E + + Y +L+
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
G D + D + E SP TYN LI G CK G + A F M+ + +P+
Sbjct: 257 FCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPN 316
Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
+ TY ++ LC G EALQLL+L+ P +TYN +I+ L K G + A+ +
Sbjct: 317 VYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVE 376
Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS--AYRLVIHGLCK 514
M + PD+IT+ L+ G C ++EA LL + K + +Y +IHGLCK
Sbjct: 377 LMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCK 436
Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
++ A+ + +L++ D + ++ G +A +LW+++ + K+ T
Sbjct: 437 ENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDT 496
Query: 575 LLA 577
A
Sbjct: 497 YTA 499
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 177/363 (48%), Gaps = 11/363 (3%)
Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
Q+++A+++ + SG N ++ + + + A F++ L ++ +
Sbjct: 53 QLKNAVSVFQQAVDSGSSL-AFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111
Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
L+E + A VL M G + ++ +N L+ C+ + AV ++ +
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171
Query: 322 GMEPNSITYNTLLHSLGSRGCWDA--VDKILDIMNEASHSP---TVFTYNILINGLCKYG 376
+ P+ +YNT++ RG + ++K L++ NE S ++ T+ ILI+ CK G
Sbjct: 172 SLMPDVFSYNTVI-----RGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAG 226
Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
+D A+ +M + D+V Y +++ C G L+ L + SPC ITYN
Sbjct: 227 KMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYN 286
Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
TLI G K G +++A ++ M+E G+ P+ T+ LI G C + +EA+ LL + ++
Sbjct: 287 TLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK 346
Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
+ Y ++I+ LCK V A++++ELM R +PD+ ++ ++ + G +EA
Sbjct: 347 DEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEA 406
Query: 557 YKL 559
KL
Sbjct: 407 SKL 409
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 165/370 (44%), Gaps = 41/370 (11%)
Query: 98 KKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN 157
K D L D P T N +++ FC G+L +AS++ + M R P+ +
Sbjct: 267 KALFDEVLERGDSPCA----ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322
Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
LI GL + + ++A ++L +M+ P+ +TYN+++ LCK G + A+ +++ M
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR 382
Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG--CPPYLITYTILIEQVCKQCGIAR 275
PD ITYN +L + G +A L+ P +I+Y LI +CK+ + +
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQ 442
Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV-------------------LVIN 316
A+++ D + + + D VT N L+N + K G + A+ +I+
Sbjct: 443 ALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMID 502
Query: 317 NLLSRGM----------------EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
GM +P+ YN LL SL G D ++ + M ++ P
Sbjct: 503 GFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP 562
Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
V ++NI+I+G K G + A + M PD+ TY+ ++ K G L+EA+
Sbjct: 563 DVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFF 622
Query: 421 HLLNGSSCSP 430
+ S P
Sbjct: 623 DKMVDSGFEP 632
Score = 99.0 bits (245), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 142/337 (42%), Gaps = 41/337 (12%)
Query: 113 VENDEKTN----NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
+E DE+ N N I+ C G + DA +++++M +R PD L+ GL +
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403
Query: 169 EKASKVLQIMVMSGGV--PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
++ASK+L +M+ PD I+YN ++ GLCK ++ A+ + D + D +T N
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463
Query: 227 TILRTMFDNGKFKQAIGFWKD--------------------------QLRKGC------- 253
+L + G +A+ WK + KG
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523
Query: 254 --PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
P + Y L+ +CK+ + +A + ++M + PD+V++N +++ S K G A
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583
Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
++ + G+ P+ TY+ L++ G D D M ++ P + ++
Sbjct: 584 ESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKY 643
Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
G D+ ++V K+ D TV+ +C
Sbjct: 644 CISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 99/209 (47%)
Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
S S F N L+ L + + A + + +M+ + + V+ + +L + A
Sbjct: 67 SGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFA 126
Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
+L L+ + + +N L+ GL + KA+ L +M N + PD ++ T+I G
Sbjct: 127 FGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRG 186
Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
FC ++E+A++L E+ G + ++I CK+ K+D A+ L+ M + D
Sbjct: 187 FCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEAD 246
Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
V++++++ D G + L+ +++E
Sbjct: 247 LVVYTSLIRGFCDCGELDRGKALFDEVLE 275
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 218/459 (47%), Gaps = 36/459 (7%)
Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
+++ C+ GK+ KLI+ + IP+ F +I G ++ IE A V + + + G
Sbjct: 211 LVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKG 270
Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG------------------------- 217
+P T+ M+ G CK G ++ LL E+ G
Sbjct: 271 FMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPA 330
Query: 218 ----------CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQV 267
C+PDV TYN ++ + GK + A+GF + +KG P ++Y LI+
Sbjct: 331 ESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAY 390
Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
CK A ++L MA GC PDIVTY L++ G DDAV + L+ RG+ P++
Sbjct: 391 CKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDA 450
Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
YN L+ L G + + M + + P + Y LI+G + G D A F+
Sbjct: 451 AIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSL 510
Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
V K + D+V +N ++ C+ GML+EAL ++ +N P TY+T+IDG K+
Sbjct: 511 SVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQD 570
Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
M A+ ++ M +N P+ +T+ +LI GFC + A + KE+ R Y
Sbjct: 571 MATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTT 630
Query: 508 VIHGLCK-SKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
+I L K S ++ A+ ELM++++ P++ F+ +++
Sbjct: 631 LIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQ 669
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 211/445 (47%), Gaps = 5/445 (1%)
Query: 121 NKILQNFCSRGKLTDASKLIDIMARR-NQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
N +L +L DA K+ D M R + + ++ CI L++G+ ++E K+++
Sbjct: 174 NSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCI-LVKGMCNEGKVEVGRKLIEGRW 232
Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
G +P+ + YN ++GG CK G I +A + E+ + G P + T+ T++ G F
Sbjct: 233 GKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFV 292
Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
+ + +G + +I+ + E + + C PD+ TYN L+
Sbjct: 293 ASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILI 352
Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
N CK+GK + AV ++ +G+ PN+++Y L+ + +D K+L M E
Sbjct: 353 NRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCK 412
Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
P + TY ILI+GL G +D A+N +++ + PD YN ++ LCK G A L
Sbjct: 413 PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLL 472
Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
+ + P Y TLIDG + G ++A ++ +E G+ D + H +I GFCR
Sbjct: 473 FSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCR 532
Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
+ ++EA+ + + + Y +I G K + + AI++ M ++ KP+
Sbjct: 533 SGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVT 592
Query: 540 FSTIVKKV---ADDGMTEEAYKLWQ 561
+++++ D M EE +K Q
Sbjct: 593 YTSLINGFCCQGDFKMAEETFKEMQ 617
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 196/423 (46%), Gaps = 1/423 (0%)
Query: 123 ILQNFCSRGKLTDASKLID-IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
+L + G L+ A ++ D ++ + +PD C +L+ L++ R+ A KV M
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDR 199
Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
G D + ++V G+C G++ L++ GC P+++ YNTI+ G + A
Sbjct: 200 GDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENA 259
Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
+K+ KG P L T+ +I CK+ + +L ++ G + N++++
Sbjct: 260 YLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDA 319
Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
+ G D I +++ +P+ TYN L++ L G + LD ++ P
Sbjct: 320 KYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPN 379
Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
+Y LI CK D A QM + C+PDIVTY ++ L G +++A+ +
Sbjct: 380 NLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKV 439
Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
L SP YN L+ GL K G A +L+ +M++ I PD + TLI GF R+
Sbjct: 440 KLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSG 499
Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
+EA + ++G K+ + +I G C+S +D A+ + M PD +S
Sbjct: 500 DFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYS 559
Query: 542 TIV 544
TI+
Sbjct: 560 TII 562
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 181/431 (41%), Gaps = 56/431 (12%)
Query: 102 DPSLPSSDGPFVENDEK----TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN 157
DP+ S G + ND K T N ++ C GK A +D +++ IP+
Sbjct: 328 DPA--ESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAP 385
Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
LI+ + + ASK+L M G PD +TY +++ GL G + A+ + ++ G
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445
Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
PD YN ++ + G+F A + + L + P Y LI+ + A
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505
Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
+V +G D+V +N+++ C+ G D+A+ +N + + P+ TY+T++
Sbjct: 506 KVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGY 565
Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
+ KI M + P V TY LING C G A +F +M ++ P++
Sbjct: 566 VKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNV 625
Query: 398 VTYNTVLGALCKEG-MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK----------- 445
VTY T++ +L KE L +A+ L+ + C P +T+N L+ G KK
Sbjct: 626 VTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDG 685
Query: 446 --------------------------------------GCMEKAMVLYGQMMENGISPDD 467
G ++ A + +M++ G SPD
Sbjct: 686 SNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDP 745
Query: 468 ITHRTLIWGFC 478
++ ++ GFC
Sbjct: 746 VSFAAILHGFC 756
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 177/368 (48%), Gaps = 1/368 (0%)
Query: 199 KRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
+ G + A+ + D + + PDVI N++L + + + A + + +G
Sbjct: 146 ESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDN 205
Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
+ IL++ +C + + ++++ +GC P+IV YN+++ CK G ++A LV
Sbjct: 206 YSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKE 265
Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
L +G P T+ T+++ G + A D++L + E +V+ N +I+ ++G
Sbjct: 266 LKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGY 325
Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
S +++ +C+PD+ TYN ++ LCKEG A+ L + P ++Y
Sbjct: 326 KVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAP 385
Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
LI K + A L QM E G PD +T+ LI G + +++AV++ ++ RG
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445
Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
+ Y +++ GLCK+ + A + M+ PD V++T++ G +EA
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505
Query: 558 KLWQKLIE 565
K++ +E
Sbjct: 506 KVFSLSVE 513
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 131/314 (41%), Gaps = 15/314 (4%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
V D N ++ C G+ A L M RN +PD + LI G IR ++A
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
KV + V G D + +N M+ G C+ G + A+A ++ M+ PD TY+TI+
Sbjct: 506 KVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGY 565
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
AI ++ + C P ++TYT LI C Q A E +M + P++
Sbjct: 566 VKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNV 625
Query: 293 VTYNSLVNFSCKQGK-YDDAVLVINNLLSRGMEPNSITYNTLLHSL-------------- 337
VTY +L+ K+ + AV +++ PN +T+N LL
Sbjct: 626 VTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDG 685
Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
+ G + M S YN + LC +G+V A ++MV K PD
Sbjct: 686 SNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDP 745
Query: 398 VTYNTVLGALCKEG 411
V++ +L C G
Sbjct: 746 VSFAAILHGFCVVG 759
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 78/219 (35%), Gaps = 58/219 (26%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR-IDRIEKASKVLQI 177
T ++ FC +G A + M R+ +P+ LIR L + +EKA ++
Sbjct: 592 TYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWEL 651
Query: 178 MVMSGGVPDTITYNMMVGG----------------------------------------- 196
M+ + VP+ +T+N ++ G
Sbjct: 652 MMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAA 711
Query: 197 --------LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD- 247
LC G +++A D+M G PD +++ IL G KQ W++
Sbjct: 712 AYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQ----WRNM 767
Query: 248 ---QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
L + + Y+ ++EQ Q I A +L M
Sbjct: 768 DFCNLGEKGLEVAVRYSQVLEQHLPQPVICEASTILHAM 806
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 127/485 (26%), Positives = 231/485 (47%), Gaps = 44/485 (9%)
Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIP---DFHFCINLIRGLIRIDRIEKASKVLQIM 178
+IL+N + +A L M +P DF +N+I + + D + LQIM
Sbjct: 42 EILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM 101
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
G D T N+++ C+ Q A + L +M G EPD++T+ +++ +
Sbjct: 102 ---GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRM 158
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
++A+ + G P ++ YT +I+ +CK + A+ + D M G PD+V Y SL
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
VN C G++ DA ++ + R ++P+ IT+N L+ + G + +++ + M S
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI 278
Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
+P +FTY LING C G VD A F M +K C PD+V Y +++ CK +++A++
Sbjct: 279 APNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMK 338
Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
+ + ++ + ITY TLI G + G A ++ M+ G+ P+ T+ L+ C
Sbjct: 339 IFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLC 398
Query: 479 RADQVEEAVDLLKEIGKR---GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM------- 528
+V++A+ + +++ KR G Y +++HGLC + K++ A+ V E M
Sbjct: 399 YNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDI 458
Query: 529 ----------------------------ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
S KP+ ++T++ + +G+ EA+ L+
Sbjct: 459 GIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLF 518
Query: 561 QKLIE 565
+K+ E
Sbjct: 519 RKMKE 523
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 187/387 (48%), Gaps = 3/387 (0%)
Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
E D T ++ FC ++ +A +++ M PD +I L + + A
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
+ M G PD + Y +V GLC G+ R A +LL M+ +PDVIT+N ++
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
GKF A + + +R P + TYT LI C + + A ++ M +GC PD+V
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
Y SL+N CK K DDA+ + + +G+ N+ITY TL+ G G + ++ M
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN---CQPDIVTYNTVLGALCKE 410
P + TYN+L++ LC G V +A+ F M + P+I TYN +L LC
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438
Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
G L +AL + + +ITY +I G+ K G ++ A+ L+ + G+ P+ +T+
Sbjct: 439 GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTY 498
Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRG 497
T+I G R EA L +++ + G
Sbjct: 499 TTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 202/405 (49%), Gaps = 3/405 (0%)
Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
V +D T N ++ FC + AS + M + PD +LI G +R+E+A
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162
Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
++ MV G PD + Y ++ LCK G + A++L D+M G PDV+ Y +++ +
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
++G+++ A + ++ P +IT+ LI+ K+ A E+ ++M +P+I
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
TY SL+N C +G D+A + + ++G P+ + Y +L++ D KI
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
M++ + TY LI G + G + A F+ MVS+ P+I TYN +L LC G
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 413 LNEALQLLHLLNG---SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
+ +AL + + +P + TYN L+ GL G +EKA++++ M + + IT
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIIT 462
Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
+ +I G C+A +V+ AV+L + +G K Y +I GL +
Sbjct: 463 YTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFR 507
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 170/346 (49%), Gaps = 4/346 (1%)
Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
Y ILR + +F +A+ + + P +I +T L+ + K I + D +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS--LGSRGC 342
I G S D+ T N L+N C+ + A + ++ G EP+ +T+ +L++ LG+R
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNR-- 157
Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
+ +++ M E P V Y +I+ LCK G V+ A++ F+QM + +PD+V Y +
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTS 217
Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
++ LC G +A LL + P +IT+N LID K+G A LY +M+
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
I+P+ T+ +LI GFC V+EA + + +G AY +I+G CK KKVD A+
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAM 337
Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
++ M + ++T+++ G A +++ ++ V
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGV 383
Score = 32.7 bits (73), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/159 (18%), Positives = 64/159 (40%)
Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
+G +AL LL+ S Y ++ +A+ L+ M+E+ P I
Sbjct: 15 KGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIID 74
Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
L+ + + + ++L + G L+++ C+S + +A L M+
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
++PD F++++ EEA + +++E +
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 199 bits (505), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 229/493 (46%), Gaps = 51/493 (10%)
Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
CS GK A +I M + IPD ++ L ++E A + + M G V D
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
TY +MV CK G I A +EM GC P+V+TY ++ K A ++
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577
Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI-------------- 292
L +GC P ++TY+ LI+ CK + +A ++ + M PD+
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637
Query: 293 --VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
VTY +L++ CK + ++A +++ + G EPN I Y+ L+ L G D ++
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697
Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
M+E T++TY+ LI+ K D A ++M+ +C P++V Y ++ LCK
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757
Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
G +EA +L+ ++ C P ++TY +IDG G +E + L +M G++P+ +T+
Sbjct: 758 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817
Query: 471 RTLIWGFCRADQVE---------------------------------EAVDLLKEIGKRG 497
R LI C+ ++ E++ LL EIG+
Sbjct: 818 RVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDD 877
Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLE--LMISSRYKPDDTVFSTIVKKVADDGMTEE 555
S YRL+I L K+++++MA+++LE S+ + ++++++ + E
Sbjct: 878 TAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVET 937
Query: 556 AYKLWQKLIEWKV 568
A++L+ ++ + V
Sbjct: 938 AFQLFSEMTKKGV 950
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 221/497 (44%), Gaps = 60/497 (12%)
Query: 126 NFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVP 185
+ C GK +A L++ N +PD F LI GL E+A L M + +P
Sbjct: 279 SLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
+ +TY+ ++ G + Q+ +L+ M + GC P +N+++ +G A
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 246 KDQLRKGCPPYLITYTILIEQVCK-----QCGIARAIE-VLDDMAIEGCSPDIVTYNSLV 299
K ++ G P + Y ILI +C C + E +M G + + +S
Sbjct: 396 KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT 455
Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
C GKY+ A VI ++ +G P++ TY+ +L+ L + + + + M
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 515
Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
V+TY I+++ CK GL+++A FN+M C P++VTY ++ A K ++ A +L
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575
Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM----------------ENGI 463
+ C P ++TY+ LIDG K G +EKA ++ +M +N
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 635
Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC---------- 513
P+ +T+ L+ GFC++ +VEEA LL + G + Y +I GLC
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695
Query: 514 -------------------------KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
K K+ D+A +VL M+ + P+ +++ ++ +
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755
Query: 549 DDGMTEEAYKLWQKLIE 565
G T+EAYKL Q + E
Sbjct: 756 KVGKTDEAYKLMQMMEE 772
Score = 172 bits (436), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 202/428 (47%), Gaps = 20/428 (4%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T ++ + K++ A++L + M +P+ LI G + ++EKA ++ + M
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Query: 179 VMSGGVPDT----------------ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
S VPD +TY ++ G CK ++ A LLD MS+ GCEP+
Sbjct: 615 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQ 674
Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
I Y+ ++ + GK +A + G P L TY+ LI++ K A +VL
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 734
Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
M C+P++V Y +++ CK GK D+A ++ + +G +PN +TY ++ G G
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
+ ++L+ M +P TY +LI+ CK G +D A N +M + Y
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 854
Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
V+ KE + E+L LL + +P L Y LID L K +E A+ L ++
Sbjct: 855 VIEGFNKEFI--ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFS 912
Query: 463 ISPDDI--THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
+ D T+ +LI C A++VE A L E+ K+G ++ +I GL ++ K+
Sbjct: 913 ATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISE 972
Query: 521 AIQVLELM 528
A+ +L+ +
Sbjct: 973 ALLLLDFI 980
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 206/462 (44%), Gaps = 61/462 (13%)
Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGG---------------------------------- 196
A K+L+ MV G +P + YN+++G
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450
Query: 197 -------LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
LC G+ A +++ EM G PD TY+ +L + + K + A +++
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510
Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
R G + TYTI+++ CK I +A + ++M GC+P++VTY +L++ K K
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570
Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHS-----------------LGSRGCWDAVDKILDI 352
A + +LS G PN +TY+ L+ GS+ D VD
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD-VDMYFKQ 629
Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
++ S P V TY L++G CK V+ A + M + C+P+ + Y+ ++ LCK G
Sbjct: 630 YDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK 689
Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
L+EA ++ ++ L TY++LID K + A + +M+EN +P+ + +
Sbjct: 690 LDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTE 749
Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
+I G C+ + +EA L++ + ++G + Y +I G K++ +++LE M S
Sbjct: 750 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 809
Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKL--IEWKVFEKG 572
P+ + ++ +G + A+ L +++ W G
Sbjct: 810 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAG 851
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 190/428 (44%), Gaps = 21/428 (4%)
Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN------LIRGLIRIDRIEKASKV 174
N +++ C G + A + ++ DF F + LI+ ++ DR++ AS +
Sbjct: 204 NVLVRKHCRNGSFSIA------LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLI 257
Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
+ M ++ D T LCK G+ R A+ L++ + PD + Y ++ + +
Sbjct: 258 HREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFV---PDTVFYTKLISGLCE 314
Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
F++A+ F C P ++TY+ L+ + + R VL+ M +EGC P
Sbjct: 315 ASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKI 374
Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL----GSRGC--WDAVDK 348
+NSLV+ C G + A ++ ++ G P + YN L+ S+ S C D +K
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434
Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
M A + LC G ++A + +M+ + PD TY+ VL LC
Sbjct: 435 AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494
Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
+ A L + + TY ++D K G +E+A + +M E G +P+ +
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554
Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
T+ LI + +A +V A +L + + G Y +I G CK+ +V+ A Q+ E M
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Query: 529 ISSRYKPD 536
S+ PD
Sbjct: 615 CGSKDVPD 622
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 148/319 (46%), Gaps = 8/319 (2%)
Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
E ++ + ++ C GKL +A ++ M+ + +LI ++ R + ASK
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730
Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
VL M+ + P+ + Y M+ GLCK G+ A L+ M GC+P+V+TY ++
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790
Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
GK + + + KG P +TY +LI+ CK + A +L++M
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850
Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
Y ++ K+ + +++ +++ + P Y L+ +L + ++L+ +
Sbjct: 851 GYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 908
Query: 354 NEASHSPTVF----TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
A+ S T+ TYN LI LC V+ A F++M K P++ ++ +++ L +
Sbjct: 909 --ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFR 966
Query: 410 EGMLNEALQLLHLLNGSSC 428
++EAL LL ++ C
Sbjct: 967 NSKISEALLLLDFISHMVC 985
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 137/311 (44%), Gaps = 15/311 (4%)
Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
+L+ + C+ + A+E L + P TYN L+ K + D A L+ +
Sbjct: 205 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 264
Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
+ + T +SL G W + L ++ + P Y LI+GLC+ L + A
Sbjct: 265 NLRMDGFTLRCFAYSLCKVGKW---REALTLVETENFVPDTVFYTKLISGLCEASLFEEA 321
Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
++ N+M + +C P++VTY+T+L + L ++L+++ C P +N+L+
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381
Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC---------RADQVEEAVDLLKE 492
G A L +M++ G P + + LI C D E+A +
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLA 441
Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
G NK+ S++ LC + K + A V+ MI + PD + +S ++ + +
Sbjct: 442 AGVVLNKINVSSF---TRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASK 498
Query: 553 TEEAYKLWQKL 563
E A+ L++++
Sbjct: 499 MELAFLLFEEM 509
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 104/260 (40%), Gaps = 11/260 (4%)
Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI----L 350
YN+LV+ + DD V L + + + + L+ L + C + I L
Sbjct: 168 YNALVDLIVR----DDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEEL 223
Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
+ + P+ TYN LI K +D A +M N + D T +LCK
Sbjct: 224 GRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKV 283
Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
G EAL L+ N P + Y LI GL + E+AM +M P+ +T+
Sbjct: 284 GKWREALTLVETENF---VPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTY 340
Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
TL+ G Q+ +L + G + ++H C S A ++L+ M+
Sbjct: 341 STLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVK 400
Query: 531 SRYKPDDTVFSTIVKKVADD 550
+ P V++ ++ + D
Sbjct: 401 CGHMPGYVVYNILIGSICGD 420
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 196 bits (497), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 124/473 (26%), Positives = 218/473 (46%), Gaps = 40/473 (8%)
Query: 130 RGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTIT 189
G + A L D M IP +LI G R + + ++L M V T
Sbjct: 360 EGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYT 419
Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
Y +V G+C G + A ++ EM SGC P+V+ Y T+++T N +F A+ K+
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS------------ 297
+G P + Y LI + K + A L +M G P+ TY +
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 298 -----------------------LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
L+N CK+GK +A +++ +G+ ++ TY L+
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
+ L D ++I M +P VF+Y +LING K G + +A + F++MV +
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659
Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
P+++ YN +LG C+ G + +A +LL ++ P +TY T+IDG K G + +A L
Sbjct: 660 PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
+ +M G+ PD + TL+ G CR + VE A+ + K+G + + +I+ + K
Sbjct: 720 FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFK 778
Query: 515 SKKVDMAIQVLELMISSRY----KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
K ++ +VL ++ + KP+D ++ ++ + +G E A +L+ ++
Sbjct: 779 FGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 178/372 (47%), Gaps = 10/372 (2%)
Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
D KT ++ K+ DA ++ M + PD LI G ++ ++KAS +
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650
Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
MV G P+ I YNM++GG C+ G+I A LLDEMSV G P+ +TY TI+ +
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710
Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
G +A + + KG P YT L++ C+ + RAI + +GC+ +
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPF 769
Query: 296 NSLVNFSCKQGKYDDAVLVINNLL----SRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
N+L+N+ K GK + V+N L+ R +PN +TYN ++ L G +A ++
Sbjct: 770 NALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFH 829
Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
M A+ PTV TY L+NG K G F++ ++ +PD + Y+ ++ A KEG
Sbjct: 830 QMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889
Query: 412 MLNEALQLLHLLNGSS-----CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
M +AL L+ + + C + T L+ G AK G ME A + M+ PD
Sbjct: 890 MTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949
Query: 467 DITHRTLIWGFC 478
T LI C
Sbjct: 950 SATVIELINESC 961
Score = 179 bits (453), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 217/441 (49%), Gaps = 22/441 (4%)
Query: 113 VENDEKTN----NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
VEN K N + + + A K + M +P+ C LI + ++
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKV 573
Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
+A + MV G + D TY +++ GL K ++ A + EM G PDV +Y +
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVL 633
Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
+ G ++A + + + +G P +I Y +L+ C+ I +A E+LD+M+++G
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693
Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC--WDAV 346
P+ VTY ++++ CK G +A + + + +G+ P+S Y TL+ GC + V
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD-----GCCRLNDV 748
Query: 347 DKILDIM--NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC----QPDIVTY 400
++ + I N+ + + +N LIN + K+G + N+++ + +P+ VTY
Sbjct: 749 ERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTY 808
Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
N ++ LCKEG L A +L H + ++ P +ITY +L++G K G + ++ + +
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868
Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR-----GNKMRNSAYRLVIHGLCKS 515
GI PD I + +I F + +A+ L+ ++ + G K+ S R ++ G K
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKV 928
Query: 516 KKVDMAIQVLELMISSRYKPD 536
++++A +V+E M+ +Y PD
Sbjct: 929 GEMEVAEKVMENMVRLQYIPD 949
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/496 (24%), Positives = 210/496 (42%), Gaps = 40/496 (8%)
Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
T +++ CS G L A ++ M P+ LI+ ++ R A +VL+ M
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
G PD YN ++ GL K ++ A + L EM +G +P+ TY + + +F
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
A + K+ G P + T LI + CK+ + A M +G D TY L
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598
Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
+N K K DDA + + +G+ P+ +Y L++ G I D M E
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
+P V YN+L+ G C+ G +++A ++M K P+ VTY T++ CK G L EA +
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718
Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG---------------------- 456
L + P Y TL+DG + +E+A+ ++G
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFK 778
Query: 457 ------------QMMENGI----SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
++M+ P+D+T+ +I C+ +E A +L ++ + N M
Sbjct: 779 FGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM-QNANLM 837
Query: 501 RNS-AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
Y +++G K + V + I++ +PD ++S I+ +GMT +A L
Sbjct: 838 PTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVL 897
Query: 560 WQKLIEWKVFEKGTTL 575
++ + G L
Sbjct: 898 VDQMFAKNAVDDGCKL 913
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/499 (20%), Positives = 210/499 (42%), Gaps = 56/499 (11%)
Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
+ + ++G + +A + +P C L+ L+R +R++ V + MV
Sbjct: 157 LFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERN 216
Query: 183 GVPDTITYNMMVGGLCKRGQIR---------------------SAIALLDEMSVSGCEPD 221
V D TY+M++ C+ G ++ A+ L + M G P
Sbjct: 217 VVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPL 276
Query: 222 VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD 281
TY+ ++ + + + A + G TY++LI+ + K A ++
Sbjct: 277 KYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVH 336
Query: 282 DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
+M G + Y+ + K+G + A + + +++ G+ P + Y +L+
Sbjct: 337 EMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK 396
Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
++L M + + + +TY ++ G+C G +D A N +M++ C+P++V Y
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456
Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
T++ + +A+++L + +P + YN+LI GL+K M++A +M+EN
Sbjct: 457 TLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN 516
Query: 462 GISPDDITHRTLIWGFCRADQVEEA-------------------VDLLKEIGKRGNKMRN 502
G+ P+ T+ I G+ A + A L+ E K+G +
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576
Query: 503 -SAYR---------------LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
SAYR ++++GL K+ KVD A ++ M PD + ++
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 547 VADDGMTEEAYKLWQKLIE 565
+ G ++A ++ +++E
Sbjct: 637 FSKLGNMQKASSIFDEMVE 655
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 5/162 (3%)
Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
F + ++ T N ++ C G L A +L M N +P +L+ G ++ R +
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859
Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-----GCEPDVITYN 226
V + +G PD I Y++++ K G A+ L+D+M GC+ + T
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR 919
Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
+L G+ + A ++ +R P T LI + C
Sbjct: 920 ALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 88/221 (39%), Gaps = 40/221 (18%)
Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKN------------CQPDIV-------TYNTVL 404
+++ L LC +G ++A++ +M+ +N C + V + +
Sbjct: 99 SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILF 158
Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
+G + EA+ + G P L L+D L + ++ +Y M+E +
Sbjct: 159 DGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV 218
Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN----------KMRNS----------- 503
D T+ LI CRA V+ D+L + K K++ S
Sbjct: 219 FDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKY 278
Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
Y ++I GLCK K+++ A +L M S D+ +S ++
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLI 319
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 211,670,268
Number of Sequences: 539616
Number of extensions: 8581942
Number of successful extensions: 32267
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 21974
Number of HSP's gapped (non-prelim): 3117
length of query: 577
length of database: 191,569,459
effective HSP length: 123
effective length of query: 454
effective length of database: 125,196,691
effective search space: 56839297714
effective search space used: 56839297714
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)