BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008108
(577 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 121/307 (39%), Positives = 186/307 (60%), Gaps = 6/307 (1%)
Query: 221 DENVEETIAKSLQFDFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNS 280
+E+ E + + +F ++VA+DNFS+ N LG+GGFG VYKG L++G +AVKRL +
Sbjct: 15 EEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEER 74
Query: 281 KQG-EIEFKNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFD-PINRE 338
QG E++F+ EV +++ HRNL+RL GFC+ ER+LVY ++ N S+ + + P ++
Sbjct: 75 XQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP 134
Query: 339 HMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEM 398
+ W KR +I G ARGL YLH+ +IIHRD+KA+NILLD E + DFG+A+L +
Sbjct: 135 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 194
Query: 399 DQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETED 458
H V GT G++APEY+ G+ S K+D+F +GV++LE+++GQ+ +D
Sbjct: 195 KDXHV-XXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 253
Query: 459 LLTYAWRN--WNEGAALNLMDPTMRGG-STSEMMKCIHIGLLCVQENVSNRPGMASVVNM 515
++ W E L+D ++G E+ + I + LLC Q + RP M+ VV M
Sbjct: 254 VMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 313
Query: 516 LNGDTVT 522
L GD +
Sbjct: 314 LEGDGLA 320
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 221 bits (563), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 119/307 (38%), Positives = 184/307 (59%), Gaps = 6/307 (1%)
Query: 221 DENVEETIAKSLQFDFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNS 280
+E+ E + + +F ++VA+DNF + N LG+GGFG VYKG L++G +AVKRL +
Sbjct: 7 EEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEER 66
Query: 281 KQG-EIEFKNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFD-PINRE 338
QG E++F+ EV +++ HRNL+RL GFC+ ER+LVY ++ N S+ + + P ++
Sbjct: 67 TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP 126
Query: 339 HMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEM 398
+ W KR +I G ARGL YLH+ +IIHRD+KA+NILLD E + DFG+A+L +
Sbjct: 127 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 186
Query: 399 DQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETED 458
H V G G++APEY+ G+ S K+D+F +GV++LE+++GQ+ +D
Sbjct: 187 KDXHV-XXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 245
Query: 459 LLTYAWRN--WNEGAALNLMDPTMRGG-STSEMMKCIHIGLLCVQENVSNRPGMASVVNM 515
++ W E L+D ++G E+ + I + LLC Q + RP M+ VV M
Sbjct: 246 VMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 305
Query: 516 LNGDTVT 522
L GD +
Sbjct: 306 LEGDGLA 312
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 111/301 (36%), Positives = 170/301 (56%), Gaps = 14/301 (4%)
Query: 223 NVEETIAKSLQFDFETIRV-------ATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKR 275
++ + ++ S FE+ RV AT+NF +G G FG VYKG+L +G +A+KR
Sbjct: 11 SINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR 70
Query: 276 LSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLD-HFIFDP 334
+ S QG EF+ E+ L+ +H +LV L+GFC ER E IL+Y+++ N +L H
Sbjct: 71 RTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD 130
Query: 335 INREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR 394
+ M+WE+R +I G ARGL YLH + IIHRD+K+ NILLD PKI+DFG+++
Sbjct: 131 LPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK 187
Query: 395 L-FEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTE 453
E+DQTH V GT GY+ PEY + GR + KSD++SFGV++ E++ +
Sbjct: 188 KGTELDQTHL-XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP 246
Query: 454 EETEDLLTYAWRNWNEGAALNLMDPTMRGGSTSEMMKCI-HIGLLCVQENVSNRPGMASV 512
E +L +A + N G ++DP + E ++ + C+ + +RP M V
Sbjct: 247 REMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
Query: 513 V 513
+
Sbjct: 307 L 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/301 (36%), Positives = 169/301 (56%), Gaps = 14/301 (4%)
Query: 223 NVEETIAKSLQFDFETIRV-------ATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKR 275
++ + ++ S FE+ RV AT+NF +G G FG VYKG+L +G +A+KR
Sbjct: 11 SINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR 70
Query: 276 LSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLD-HFIFDP 334
+ S QG EF+ E+ L+ +H +LV L+GFC ER E IL+Y+++ N +L H
Sbjct: 71 RTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD 130
Query: 335 INREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR 394
+ M+WE+R +I G ARGL YLH + IIHRD+K+ NILLD PKI+DFG+++
Sbjct: 131 LPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK 187
Query: 395 L-FEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTE 453
E+ QTH V GT GY+ PEY + GR + KSD++SFGV++ E++ +
Sbjct: 188 KGTELGQTHL-XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP 246
Query: 454 EETEDLLTYAWRNWNEGAALNLMDPTMRGGSTSEMMKCI-HIGLLCVQENVSNRPGMASV 512
E +L +A + N G ++DP + E ++ + C+ + +RP M V
Sbjct: 247 REMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
Query: 513 V 513
+
Sbjct: 307 L 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 170/314 (54%), Gaps = 18/314 (5%)
Query: 220 EDENVEETIAKSLQFDFETIRVATDNFSD------ANKLGQGGFGAVYKGMLSNGETIAV 273
E++++E + + F F ++ T+NF + NK+G+GGFG VYKG ++N T+AV
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAV 59
Query: 274 KRLSK----NSKQGEIEFKNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDH 329
K+L+ +++ + +F E+ ++A+ QH NLV LLGF + + LVY ++PN SL
Sbjct: 60 KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119
Query: 330 FIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISD 389
+ ++W R KI +G A G+ +LHE+ IHRD+K++NILLD KISD
Sbjct: 120 RLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISD 176
Query: 390 FGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSS 449
FG+AR E +R+VGT YMAPE + G + KSDI+SFGV++LEI++G +
Sbjct: 177 FGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG--LPA 233
Query: 450 FGTEEETEDLL-TYAWRNWNEGAALNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPG 508
E + LL E + +D M ++ + + C+ E + RP
Sbjct: 234 VDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPD 293
Query: 509 MASVVNMLNGDTVT 522
+ V +L T +
Sbjct: 294 IKKVQQLLQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 169/314 (53%), Gaps = 18/314 (5%)
Query: 220 EDENVEETIAKSLQFDFETIRVATDNFSD------ANKLGQGGFGAVYKGMLSNGETIAV 273
E++++E + + F F ++ T+NF + NK+G+GGFG VYKG ++N T+AV
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAV 59
Query: 274 KRLSK----NSKQGEIEFKNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDH 329
K+L+ +++ + +F E+ ++A+ QH NLV LLGF + + LVY ++PN SL
Sbjct: 60 KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119
Query: 330 FIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISD 389
+ ++W R KI +G A G+ +LHE+ IHRD+K++NILLD KISD
Sbjct: 120 RLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISD 176
Query: 390 FGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSS 449
FG+AR E R+VGT YMAPE + G + KSDI+SFGV++LEI++G +
Sbjct: 177 FGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG--LPA 233
Query: 450 FGTEEETEDLL-TYAWRNWNEGAALNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPG 508
E + LL E + +D M ++ + + C+ E + RP
Sbjct: 234 VDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPD 293
Query: 509 MASVVNMLNGDTVT 522
+ V +L T +
Sbjct: 294 IKKVQQLLQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 161/300 (53%), Gaps = 18/300 (6%)
Query: 234 FDFETIRVATDNFSD------ANKLGQGGFGAVYKGMLSNGETIAVKRLSK----NSKQG 283
F F ++ T+NF + NK+G+GGFG VYKG ++N T+AVK+L+ +++
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 67
Query: 284 EIEFKNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWE 343
+ +F E+ ++A+ QH NLV LLGF + + LVY ++PN SL + ++W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 344 KRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHS 403
R KI +G A G+ +LHE+ IHRD+K++NILLD KISDFG+AR E
Sbjct: 128 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 404 DTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL-TY 462
R+VGT YMAPE + G + KSDI+SFGV++LEI++G + E + LL
Sbjct: 185 MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG--LPAVDEHREPQLLLDIK 241
Query: 463 AWRNWNEGAALNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVNMLNGDTVT 522
E + +D M ++ + + C+ E + RP + V +L T +
Sbjct: 242 EEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 157/300 (52%), Gaps = 18/300 (6%)
Query: 234 FDFETIRVATDNFSD------ANKLGQGGFGAVYKGMLSNGETIAVKRLSK----NSKQG 283
F F ++ T+NF + NK G+GGFG VYKG ++N T+AVK+L+ +++
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 284 EIEFKNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWE 343
+ +F E+ + A+ QH NLV LLGF + + LVY + PN SL + ++W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 344 KRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHS 403
R KI +G A G+ +LHE+ IHRD+K++NILLD KISDFG+AR E
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 404 DTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL-TY 462
+R+VGT Y APE + G + KSDI+SFGV++LEI++G + E + LL
Sbjct: 182 XXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITG--LPAVDEHREPQLLLDIK 238
Query: 463 AWRNWNEGAALNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVNMLNGDTVT 522
E + +D ++ + + C+ E + RP + V +L T +
Sbjct: 239 EEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQEXTAS 298
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 137/250 (54%), Gaps = 14/250 (5%)
Query: 219 LEDENVEETIAKSLQFDFETIRVATDN-FSDANKLGQGGFGAVYKGM-LSNGETI----A 272
LE E VE + +R+ + LG G FG VYKG+ + GET+ A
Sbjct: 12 LETELVEPLTPSGTAPNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVA 71
Query: 273 VKRLSKNS-KQGEIEFKNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFI 331
+K L++ + + +EF +E L++A + H +LVRLLG CL + LV + +P+ L ++
Sbjct: 72 IKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYV 130
Query: 332 FDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFG 391
+ +++++ + IA+G++YL E R++HRDL A N+L+ S + KI+DFG
Sbjct: 131 HE--HKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFG 185
Query: 392 MARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS-GQKRSSF 450
+ARL E D+ + + +MA E + + +F+ +SD++S+GV + E+++ G K
Sbjct: 186 LARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG 245
Query: 451 GTEEETEDLL 460
E DLL
Sbjct: 246 IPTREIPDLL 255
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 127/216 (58%), Gaps = 13/216 (6%)
Query: 252 LGQGGFGAVYKGM-LSNGETI----AVKRLSKNS-KQGEIEFKNEVLLLARLQHRNLVRL 305
LG G FG VYKG+ + GET+ A+K L++ + + +EF +E L++A + H +LVRL
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 306 LGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRL 365
LG CL + LV + +P+ L ++ + +++++ + IA+G++YL E
Sbjct: 83 LGVCLSPTIQ-LVTQLMPHGCLLEYVHE--HKDNIGSQLLLNWCVQIAKGMMYLEER--- 136
Query: 366 RIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRF 425
R++HRDL A N+L+ S + KI+DFG+ARL E D+ + + +MA E + + +F
Sbjct: 137 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 196
Query: 426 SVKSDIFSFGVLVLEIVS-GQKRSSFGTEEETEDLL 460
+ +SD++S+GV + E+++ G K E DLL
Sbjct: 197 THQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL 232
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 111/203 (54%), Gaps = 7/203 (3%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHR 300
V + +LG G FG V+ G + +AVK L + S + F E L+ +LQH+
Sbjct: 20 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQ 78
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLH 360
LVRL + I+ E++ N SL F+ P + +T K + IA G+ ++
Sbjct: 79 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE 136
Query: 361 EDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYV 420
E + IHRDL+A+NIL+ ++ KI+DFG+ARL E D ++ + APE +
Sbjct: 137 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAI 192
Query: 421 MHGRFSVKSDIFSFGVLVLEIVS 443
+G F++KSD++SFG+L+ EIV+
Sbjct: 193 NYGTFTIKSDVWSFGILLTEIVT 215
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 111/203 (54%), Gaps = 7/203 (3%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHR 300
V + +LG G FG V+ G + +AVK L + S + F E L+ +LQH+
Sbjct: 16 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQ 74
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLH 360
LVRL + I+ E++ N SL F+ P + +T K + IA G+ ++
Sbjct: 75 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE 132
Query: 361 EDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYV 420
E + IHRDL+A+NIL+ ++ KI+DFG+ARL E D ++ + APE +
Sbjct: 133 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAI 188
Query: 421 MHGRFSVKSDIFSFGVLVLEIVS 443
+G F++KSD++SFG+L+ EIV+
Sbjct: 189 NYGTFTIKSDVWSFGILLTEIVT 211
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 143/278 (51%), Gaps = 36/278 (12%)
Query: 252 LGQGGFGAVYKGML--SNGET---IAVKRLSKN-SKQGEIEFKNEVLLLARLQHRNLVRL 305
+G G FG VYKGML S+G+ +A+K L +++ ++F E ++ + H N++RL
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 306 LGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRL 365
G + K +++ E++ N +LD F+ + + + ++ GIA G+ YL + +
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKYL---ANM 166
Query: 366 RIIHRDLKASNILLDSEMNPKISDFGMARLFEMD--QTHSDTNRVVGTFGYMAPEYVMHG 423
+HRDL A NIL++S + K+SDFG++R+ E D T++ + + + APE + +
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI-PIRWTAPEAISYR 225
Query: 424 RFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMRGG 483
+F+ SD++SFG+++ E+ +TY R + E + +M G
Sbjct: 226 KFTSASDVWSFGIVMWEV------------------MTYGERPYWELSNHEVMKAINDGF 267
Query: 484 STSEMMKC----IHIGLLCVQENVSNRPGMASVVNMLN 517
M C + + C Q+ + RP A +V++L+
Sbjct: 268 RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILD 305
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 111/203 (54%), Gaps = 7/203 (3%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHR 300
V + +LG G FG V+ G + +AVK L + S + F E L+ +LQH+
Sbjct: 15 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQ 73
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLH 360
LVRL + I+ E++ N SL F+ P + +T K + IA G+ ++
Sbjct: 74 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE 131
Query: 361 EDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYV 420
E + IHRDL+A+NIL+ ++ KI+DFG+ARL E D ++ + APE +
Sbjct: 132 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAI 187
Query: 421 MHGRFSVKSDIFSFGVLVLEIVS 443
+G F++KSD++SFG+L+ EIV+
Sbjct: 188 NYGTFTIKSDVWSFGILLTEIVT 210
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 111/203 (54%), Gaps = 7/203 (3%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHR 300
V + +LG G FG V+ G + +AVK L + S + F E L+ +LQH+
Sbjct: 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQ 68
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLH 360
LVRL + I+ E++ N SL F+ P + +T K + IA G+ ++
Sbjct: 69 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE 126
Query: 361 EDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYV 420
E + IHRDL+A+NIL+ ++ KI+DFG+ARL E D ++ + APE +
Sbjct: 127 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAI 182
Query: 421 MHGRFSVKSDIFSFGVLVLEIVS 443
+G F++KSD++SFG+L+ EIV+
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 111/203 (54%), Gaps = 7/203 (3%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHR 300
V + +LG G FG V+ G + +AVK L + S + F E L+ +LQH+
Sbjct: 5 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQ 63
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLH 360
LVRL + I+ E++ N SL F+ P + +T K + IA G+ ++
Sbjct: 64 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE 121
Query: 361 EDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYV 420
E + IHRDL+A+NIL+ ++ KI+DFG+ARL E D ++ + APE +
Sbjct: 122 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAI 177
Query: 421 MHGRFSVKSDIFSFGVLVLEIVS 443
+G F++KSD++SFG+L+ EIV+
Sbjct: 178 NYGTFTIKSDVWSFGILLTEIVT 200
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 113/205 (55%), Gaps = 11/205 (5%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHR 300
V + +LG G FG V+ G + +AVK L + S + F E L+ +LQH+
Sbjct: 18 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQ 76
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLH 360
LVRL + I+ E++ N SL F+ P + +T K + IA G+ ++
Sbjct: 77 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE 134
Query: 361 EDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPE 418
E + IHRDL+A+NIL+ ++ KI+DFG+ARL E ++ T R F + APE
Sbjct: 135 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPE 188
Query: 419 YVMHGRFSVKSDIFSFGVLVLEIVS 443
+ +G F++KSD++SFG+L+ EIV+
Sbjct: 189 AINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 113/205 (55%), Gaps = 11/205 (5%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHR 300
V + +LG G FG V+ G + +AVK L + S + F E L+ +LQH+
Sbjct: 16 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQ 74
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLH 360
LVRL + I+ E++ N SL F+ P + +T K + IA G+ ++
Sbjct: 75 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE 132
Query: 361 EDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPE 418
E + IHRDL+A+NIL+ ++ KI+DFG+ARL E ++ T R F + APE
Sbjct: 133 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPE 186
Query: 419 YVMHGRFSVKSDIFSFGVLVLEIVS 443
+ +G F++KSD++SFG+L+ EIV+
Sbjct: 187 AINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 113/205 (55%), Gaps = 11/205 (5%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHR 300
V + +LG G FG V+ G + +AVK L + S + F E L+ +LQH+
Sbjct: 19 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQ 77
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLH 360
LVRL + I+ E++ N SL F+ P + +T K + IA G+ ++
Sbjct: 78 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE 135
Query: 361 EDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPE 418
E + IHRDL+A+NIL+ ++ KI+DFG+ARL E ++ T R F + APE
Sbjct: 136 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPE 189
Query: 419 YVMHGRFSVKSDIFSFGVLVLEIVS 443
+ +G F++KSD++SFG+L+ EIV+
Sbjct: 190 AINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 113/205 (55%), Gaps = 11/205 (5%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHR 300
V + +LG G FG V+ G + +AVK L + S + F E L+ +LQH+
Sbjct: 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQ 68
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLH 360
LVRL + I+ E++ N SL F+ P + +T K + IA G+ ++
Sbjct: 69 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE 126
Query: 361 EDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPE 418
E + IHRDL+A+NIL+ ++ KI+DFG+ARL E ++ T R F + APE
Sbjct: 127 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPE 180
Query: 419 YVMHGRFSVKSDIFSFGVLVLEIVS 443
+ +G F++KSD++SFG+L+ EIV+
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 113/205 (55%), Gaps = 11/205 (5%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHR 300
V + +LG G FG V+ G + +AVK L + S + F E L+ +LQH+
Sbjct: 12 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQ 70
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLH 360
LVRL + I+ E++ N SL F+ P + +T K + IA G+ ++
Sbjct: 71 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE 128
Query: 361 EDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPE 418
E + IHRDL+A+NIL+ ++ KI+DFG+ARL E ++ T R F + APE
Sbjct: 129 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPE 182
Query: 419 YVMHGRFSVKSDIFSFGVLVLEIVS 443
+ +G F++KSD++SFG+L+ EIV+
Sbjct: 183 AINYGTFTIKSDVWSFGILLTEIVT 207
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 113/205 (55%), Gaps = 11/205 (5%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHR 300
V + +LG G FG V+ G + +AVK L + S + F E L+ +LQH+
Sbjct: 11 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQ 69
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLH 360
LVRL + I+ E++ N SL F+ P + +T K + IA G+ ++
Sbjct: 70 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE 127
Query: 361 EDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPE 418
E + IHRDL+A+NIL+ ++ KI+DFG+ARL E ++ T R F + APE
Sbjct: 128 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPE 181
Query: 419 YVMHGRFSVKSDIFSFGVLVLEIVS 443
+ +G F++KSD++SFG+L+ EIV+
Sbjct: 182 AINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 113/205 (55%), Gaps = 11/205 (5%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHR 300
V + +LG G FG V+ G + +AVK L + S + F E L+ +LQH+
Sbjct: 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQ 68
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLH 360
LVRL + I+ E++ N SL F+ P + +T K + IA G+ ++
Sbjct: 69 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE 126
Query: 361 EDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPE 418
E + IHRDL+A+NIL+ ++ KI+DFG+ARL E ++ T R F + APE
Sbjct: 127 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPE 180
Query: 419 YVMHGRFSVKSDIFSFGVLVLEIVS 443
+ +G F++KSD++SFG+L+ EIV+
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 111/203 (54%), Gaps = 7/203 (3%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHR 300
V + +LG G FG V+ G + +AVK L + S + F E L+ +LQH+
Sbjct: 6 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQ 64
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLH 360
LVRL + I+ E++ N SL F+ P + +T K + IA G+ ++
Sbjct: 65 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE 122
Query: 361 EDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYV 420
E + IHR+L+A+NIL+ ++ KI+DFG+ARL E D ++ + APE +
Sbjct: 123 ERN---YIHRNLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAI 178
Query: 421 MHGRFSVKSDIFSFGVLVLEIVS 443
+G F++KSD++SFG+L+ EIV+
Sbjct: 179 NYGTFTIKSDVWSFGILLTEIVT 201
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 122/218 (55%), Gaps = 17/218 (7%)
Query: 252 LGQGGFGAVYKGM-LSNGETI----AVKRLSKN-SKQGEIEFKNEVLLLARLQHRNLVRL 305
LG G FG VYKG+ + +GE + A+K L +N S + E +E ++A + + RL
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 306 LGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRL 365
LG CL + LV + +P L + + NR + + IA+G+ YL + +
Sbjct: 85 LGICLTSTVQ-LVTQLMPYGCLLDHVRE--NRGRLGSQDLLNWCMQIAKGMSYLED---V 138
Query: 366 RIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQT--HSDTNRVVGTFGYMAPEYVMHG 423
R++HRDL A N+L+ S + KI+DFG+ARL ++D+T H+D +V +MA E ++
Sbjct: 139 RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV--PIKWMALESILRR 196
Query: 424 RFSVKSDIFSFGVLVLEIVS-GQKRSSFGTEEETEDLL 460
RF+ +SD++S+GV V E+++ G K E DLL
Sbjct: 197 RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLL 234
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 107/193 (55%), Gaps = 7/193 (3%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCL 310
KLGQG FG V+ G + +A+K L + E F E ++ +L+H LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 311 ERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHR 370
E I++ E++ SL F+ + + ++ + + IA G+ Y+ R+ +HR
Sbjct: 84 EEPIYIVI-EYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 371 DLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSD 430
DL+A+NIL+ + K++DFG+ARL E D ++ + APE ++GRF++KSD
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 431 IFSFGVLVLEIVS 443
++SFG+L+ E+ +
Sbjct: 198 VWSFGILLTELTT 210
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 109/203 (53%), Gaps = 7/203 (3%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHR 300
V + +LG G G V+ G + +AVK L + S + F E L+ +LQH+
Sbjct: 10 VPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQ 68
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLH 360
LVRL + I+ E++ N SL F+ P + +T K + IA G+ ++
Sbjct: 69 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE 126
Query: 361 EDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYV 420
E + IHRDL+A+NIL+ ++ KI+DFG+ARL E D + + APE +
Sbjct: 127 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIE-DAEXTAREGAKFPIKWTAPEAI 182
Query: 421 MHGRFSVKSDIFSFGVLVLEIVS 443
+G F++KSD++SFG+L+ EIV+
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 105/193 (54%), Gaps = 7/193 (3%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCL 310
KLGQG FG V+ G + +A+K L + E F E ++ +L+H LV+L
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 311 ERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHR 370
E I V E++ SL F+ + ++ + + IA G+ Y+ R+ +HR
Sbjct: 333 EEPIYI-VTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 387
Query: 371 DLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSD 430
DL+A+NIL+ + K++DFG+ARL E D ++ + APE ++GRF++KSD
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 446
Query: 431 IFSFGVLVLEIVS 443
++SFG+L+ E+ +
Sbjct: 447 VWSFGILLTELTT 459
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 106/193 (54%), Gaps = 7/193 (3%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCL 310
KLGQG FG V+ G + +A+K L + E F E ++ +L+H LV+L
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 311 ERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHR 370
E I V E++ SL F+ + + ++ + + IA G+ Y+ R+ +HR
Sbjct: 73 EEPIYI-VTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 127
Query: 371 DLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSD 430
DL+A+NIL+ + K++DFG+ARL E D ++ + APE ++GRF++KSD
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 186
Query: 431 IFSFGVLVLEIVS 443
++SFG+L+ E+ +
Sbjct: 187 VWSFGILLTELTT 199
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 149/285 (52%), Gaps = 37/285 (12%)
Query: 245 NFSDANKLGQGGFGAVYKGML---SNGE-TIAVKRLSKN-SKQGEIEFKNEVLLLARLQH 299
N S +G G FG V G L S E ++A+K L +++ +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 300 RNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIE------GIA 353
N++RL G + K ++V E++ N SLD F+ R+H + ++ +I+ GIA
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-----RKH---DAQFTVIQLVGMLRGIA 157
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-F 412
G+ YL S + +HRDL A NIL++S + K+SDFG+AR+ E D + T R
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPI 214
Query: 413 GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAA 472
+ +PE + + +F+ SD++S+G+++ E++S +R + E +D++ +EG
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--EMSNQDVIKAV----DEG-- 266
Query: 473 LNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVNMLN 517
L P + ++M L C Q++ +NRP +V++L+
Sbjct: 267 YRLPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILD 305
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 106/193 (54%), Gaps = 7/193 (3%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCL 310
KLGQG FG V+ G + +A+K L + E F E ++ +L+H LV+L
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 311 ERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHR 370
E I V E++ SL F+ + + ++ + + IA G+ Y+ R+ +HR
Sbjct: 75 EEPIYI-VTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 129
Query: 371 DLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSD 430
DL+A+NIL+ + K++DFG+ARL E D ++ + APE ++GRF++KSD
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 431 IFSFGVLVLEIVS 443
++SFG+L+ E+ +
Sbjct: 189 VWSFGILLTELTT 201
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 106/193 (54%), Gaps = 7/193 (3%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCL 310
KLGQG FG V+ G + +A+K L + E F E ++ +L+H LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 311 ERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHR 370
E I V E++ SL F+ + + ++ + + IA G+ Y+ R+ +HR
Sbjct: 84 EEPIYI-VTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 371 DLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSD 430
DL+A+NIL+ + K++DFG+ARL E D ++ + APE ++GRF++KSD
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 431 IFSFGVLVLEIVS 443
++SFG+L+ E+ +
Sbjct: 198 VWSFGILLTELTT 210
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 106/193 (54%), Gaps = 7/193 (3%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCL 310
KLGQG FG V+ G + +A+K L + E F E ++ +L+H LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 311 ERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHR 370
E I V E++ SL F+ + + ++ + + IA G+ Y+ R+ +HR
Sbjct: 84 EEPIYI-VCEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 371 DLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSD 430
DL+A+NIL+ + K++DFG+ARL E D ++ + APE ++GRF++KSD
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 431 IFSFGVLVLEIVS 443
++SFG+L+ E+ +
Sbjct: 198 VWSFGILLTELTT 210
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 125/270 (46%), Gaps = 25/270 (9%)
Query: 249 ANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGF 308
++G G FG V+ G N + +A+K + + + E +F E ++ +L H LV+L G
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGV 70
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
CLE+ LV+EF+ + L ++ R E + + G+ YL E S +I
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAS---VI 125
Query: 369 HRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVK 428
HRDL A N L+ K+SDFGM R F +D ++ + + +PE R+S K
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 429 SDIFSFGVLVLEIVSGQK--RSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMRGGSTS 486
SD++SFGVL+ E+ S K + E ED+ T L P +
Sbjct: 185 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST----------GFRLYKPRLASTHVY 234
Query: 487 EMMKCIHIGLLCVQENVSNRPGMASVVNML 516
++M H C +E +RP + ++ L
Sbjct: 235 QIMN--H----CWKERPEDRPAFSRLLRQL 258
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 105/193 (54%), Gaps = 7/193 (3%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCL 310
KLGQG FG V+ G + +A+K L + E F E ++ +L+H LV+L
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 311 ERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHR 370
E I V E++ SL F+ + ++ + + IA G+ Y+ R+ +HR
Sbjct: 77 EEPIYI-VTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 131
Query: 371 DLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSD 430
DL+A+NIL+ + K++DFG+ARL E D ++ + APE ++GRF++KSD
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 190
Query: 431 IFSFGVLVLEIVS 443
++SFG+L+ E+ +
Sbjct: 191 VWSFGILLTELTT 203
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 105/193 (54%), Gaps = 7/193 (3%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCL 310
KLGQG FG V+ G + +A+K L + E F E ++ +L+H LV+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 311 ERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHR 370
E I V E++ SL F+ + ++ + + IA G+ Y+ R+ +HR
Sbjct: 250 EEPIYI-VTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 371 DLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSD 430
DL+A+NIL+ + K++DFG+ARL E D ++ + APE ++GRF++KSD
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 431 IFSFGVLVLEIVS 443
++SFG+L+ E+ +
Sbjct: 364 VWSFGILLTELTT 376
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 105/193 (54%), Gaps = 7/193 (3%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCL 310
KLGQG FG V+ G + +A+K L + E F E ++ +L+H LV+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 311 ERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHR 370
E I V E++ SL F+ + ++ + + IA G+ Y+ R+ +HR
Sbjct: 250 EEPIYI-VTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 371 DLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSD 430
DL+A+NIL+ + K++DFG+ARL E D ++ + APE ++GRF++KSD
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 431 IFSFGVLVLEIVS 443
++SFG+L+ E+ +
Sbjct: 364 VWSFGILLTELTT 376
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 149/285 (52%), Gaps = 37/285 (12%)
Query: 245 NFSDANKLGQGGFGAVYKGML---SNGE-TIAVKRLSKN-SKQGEIEFKNEVLLLARLQH 299
N S +G G FG V G L S E ++A+K L +++ +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 300 RNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIE------GIA 353
N++RL G + K ++V E++ N SLD F+ R+H + ++ +I+ GIA
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-----RKH---DAQFTVIQLVGMLRGIA 157
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-F 412
G+ YL S + +HRDL A NIL++S + K+SDFG++R+ E D + T R
Sbjct: 158 SGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 413 GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAA 472
+ +PE + + +F+ SD++S+G+++ E++S +R + E +D++ +EG
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--EMSNQDVIKAV----DEG-- 266
Query: 473 LNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVNMLN 517
L P + ++M L C Q++ +NRP +V++L+
Sbjct: 267 YRLPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILD 305
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 106/193 (54%), Gaps = 7/193 (3%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCL 310
KLGQG FG V+ G + +A+K L + E F E ++ +L+H LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 311 ERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHR 370
E I++ E++ SL F+ + + ++ + + IA G+ Y+ R+ +HR
Sbjct: 84 EEPIYIVI-EYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 371 DLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSD 430
DL+A+NIL+ + K++DFG+ARL E D + + APE ++GRF++KSD
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIE-DNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 431 IFSFGVLVLEIVS 443
++SFG+L+ E+ +
Sbjct: 198 VWSFGILLTELTT 210
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 149/285 (52%), Gaps = 37/285 (12%)
Query: 245 NFSDANKLGQGGFGAVYKGML---SNGE-TIAVKRLSKN-SKQGEIEFKNEVLLLARLQH 299
N S +G G FG V G L S E ++A+K L +++ +F E ++ + H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 300 RNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIE------GIA 353
N++RL G + K ++V E++ N SLD F+ R+H + ++ +I+ GIA
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-----RKH---DAQFTVIQLVGMLRGIA 128
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-F 412
G+ YL S + +HRDL A NIL++S + K+SDFG++R+ E D + T R
Sbjct: 129 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 413 GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAA 472
+ +PE + + +F+ SD++S+G+++ E++S +R + E +D++ +EG
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--EMSNQDVIKAV----DEG-- 237
Query: 473 LNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVNMLN 517
L P + ++M L C Q++ +NRP +V++L+
Sbjct: 238 YRLPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILD 276
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 105/193 (54%), Gaps = 7/193 (3%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCL 310
KLGQG FG V+ G + +A+K L + E F E ++ +L+H LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 311 ERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHR 370
E I V E++ SL F+ + + ++ + + IA G+ Y+ R+ +HR
Sbjct: 84 EEPIYI-VTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 371 DLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSD 430
DL A+NIL+ + K++DFG+ARL E D ++ + APE ++GRF++KSD
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 431 IFSFGVLVLEIVS 443
++SFG+L+ E+ +
Sbjct: 198 VWSFGILLTELTT 210
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 106/193 (54%), Gaps = 7/193 (3%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCL 310
KLGQG FG V+ G + +A+K L + E F E ++ +++H LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 311 ERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHR 370
E I V E++ SL F+ + + ++ + + IA G+ Y+ R+ +HR
Sbjct: 84 EEPIYI-VTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 371 DLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSD 430
DL+A+NIL+ + K++DFG+ARL E D ++ + APE ++GRF++KSD
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 431 IFSFGVLVLEIVS 443
++SFG+L+ E+ +
Sbjct: 198 VWSFGILLTELTT 210
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 149/285 (52%), Gaps = 37/285 (12%)
Query: 245 NFSDANKLGQGGFGAVYKGML---SNGE-TIAVKRLSKN-SKQGEIEFKNEVLLLARLQH 299
N S +G G FG V G L S E ++A+K L +++ +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 300 RNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIE------GIA 353
N++RL G + K ++V E++ N SLD F+ R+H + ++ +I+ GIA
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-----RKH---DAQFTVIQLVGMLRGIA 157
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-F 412
G+ YL S + +HRDL A NIL++S + K+SDFG++R+ E D + T R
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 413 GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAA 472
+ +PE + + +F+ SD++S+G+++ E++S +R + E +D++ +EG
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--EMSNQDVIKAV----DEG-- 266
Query: 473 LNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVNMLN 517
L P + ++M L C Q++ +NRP +V++L+
Sbjct: 267 YRLPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILD 305
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 149/285 (52%), Gaps = 37/285 (12%)
Query: 245 NFSDANKLGQGGFGAVYKGML---SNGE-TIAVKRLSKN-SKQGEIEFKNEVLLLARLQH 299
N S +G G FG V G L S E ++A+K L +++ +F E ++ + H
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 103
Query: 300 RNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIE------GIA 353
N++RL G + K ++V E++ N SLD F+ R+H + ++ +I+ GIA
Sbjct: 104 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-----RKH---DAQFTVIQLVGMLRGIA 155
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-F 412
G+ YL S + +HRDL A NIL++S + K+SDFG++R+ E D + T R
Sbjct: 156 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 212
Query: 413 GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAA 472
+ +PE + + +F+ SD++S+G+++ E++S +R + E +D++ +EG
Sbjct: 213 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--EMSNQDVIKAV----DEG-- 264
Query: 473 LNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVNMLN 517
L P + ++M L C Q++ +NRP +V++L+
Sbjct: 265 YRLPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILD 303
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 105/193 (54%), Gaps = 7/193 (3%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCL 310
KLGQG FG V+ G + +A+K L + E F E ++ +L+H LV+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 311 ERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHR 370
E I V E++ SL F+ + ++ + + IA G+ Y+ R+ +HR
Sbjct: 250 EEPIYI-VGEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 371 DLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSD 430
DL+A+NIL+ + K++DFG+ARL E D ++ + APE ++GRF++KSD
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 431 IFSFGVLVLEIVS 443
++SFG+L+ E+ +
Sbjct: 364 VWSFGILLTELTT 376
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 107/198 (54%), Gaps = 6/198 (3%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEI--EFKNEVLLLARLQHRNLVRLLGF 308
K+G G FG V++ +G +AVK L + E EF EV ++ RL+H N+V +G
Sbjct: 44 KIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
+ +V E++ SL + RE + +R + +A+G+ YLH + I+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIV 161
Query: 369 HRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVK 428
HR+LK+ N+L+D + K+ DFG++RL T + GT +MAPE + + K
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPSNEK 219
Query: 429 SDIFSFGVLVLEIVSGQK 446
SD++SFGV++ E+ + Q+
Sbjct: 220 SDVYSFGVILWELATLQQ 237
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 149/285 (52%), Gaps = 37/285 (12%)
Query: 245 NFSDANKLGQGGFGAVYKGML---SNGE-TIAVKRLSKN-SKQGEIEFKNEVLLLARLQH 299
N S +G G FG V G L S E ++A+K L +++ +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 300 RNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIE------GIA 353
N++RL G + K ++V E++ N SLD F+ R+H + ++ +I+ GIA
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-----RKH---DAQFTVIQLVGMLRGIA 157
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-F 412
G+ YL S + +HRDL A NIL++S + K+SDFG++R+ E D + T R
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 413 GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAA 472
+ +PE + + +F+ SD++S+G+++ E++S +R + E +D++ +EG
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--EMSNQDVIKAV----DEG-- 266
Query: 473 LNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVNMLN 517
L P + ++M L C Q++ +NRP +V++L+
Sbjct: 267 YRLPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILD 305
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 149/285 (52%), Gaps = 37/285 (12%)
Query: 245 NFSDANKLGQGGFGAVYKGML---SNGE-TIAVKRLSKN-SKQGEIEFKNEVLLLARLQH 299
N S +G G FG V G L S E ++A+K L +++ +F E ++ + H
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 300 RNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIE------GIA 353
N++RL G + K ++V E++ N SLD F+ R+H + ++ +I+ GIA
Sbjct: 94 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-----RKH---DAQFTVIQLVGMLRGIA 145
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-F 412
G+ YL S + +HRDL A NIL++S + K+SDFG++R+ E D + T R
Sbjct: 146 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 202
Query: 413 GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAA 472
+ +PE + + +F+ SD++S+G+++ E++S +R + E +D++ +EG
Sbjct: 203 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--EMSNQDVIKAV----DEG-- 254
Query: 473 LNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVNMLN 517
L P + ++M L C Q++ +NRP +V++L+
Sbjct: 255 YRLPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILD 293
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 149/285 (52%), Gaps = 37/285 (12%)
Query: 245 NFSDANKLGQGGFGAVYKGML---SNGE-TIAVKRLSKN-SKQGEIEFKNEVLLLARLQH 299
N S +G G FG V G L S E ++A+K L +++ +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 300 RNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIE------GIA 353
N++RL G + K ++V E++ N SLD F+ R+H + ++ +I+ GIA
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-----RKH---DAQFTVIQLVGMLRGIA 157
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-F 412
G+ YL S + +HRDL A NIL++S + K+SDFG++R+ E D + T R
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 413 GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAA 472
+ +PE + + +F+ SD++S+G+++ E++S +R + E +D++ +EG
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--EMSNQDVIKAV----DEG-- 266
Query: 473 LNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVNMLN 517
L P + ++M L C Q++ +NRP +V++L+
Sbjct: 267 YRLPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 149/285 (52%), Gaps = 37/285 (12%)
Query: 245 NFSDANKLGQGGFGAVYKGML---SNGE-TIAVKRLSKN-SKQGEIEFKNEVLLLARLQH 299
N S +G G FG V G L S E ++A+K L +++ +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 300 RNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIE------GIA 353
N++RL G + K ++V E++ N SLD F+ R+H + ++ +I+ GIA
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-----RKH---DAQFTVIQLVGMLRGIA 157
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-F 412
G+ YL S + +HRDL A NIL++S + K+SDFG++R+ E D + T R
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 413 GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAA 472
+ +PE + + +F+ SD++S+G+++ E++S +R + E +D++ +EG
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--EMSNQDVIKAV----DEG-- 266
Query: 473 LNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVNMLN 517
L P + ++M L C Q++ +NRP +V++L+
Sbjct: 267 YRLPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 105/193 (54%), Gaps = 7/193 (3%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCL 310
KLGQG FG V+ G + +A+K L + E F E ++ +L+H LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 311 ERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHR 370
E I V E++ L F+ + + ++ + + IA G+ Y+ R+ +HR
Sbjct: 84 EEPIYI-VMEYMSKGCLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 371 DLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSD 430
DL+A+NIL+ + K++DFG+ARL E D ++ + APE ++GRF++KSD
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 431 IFSFGVLVLEIVS 443
++SFG+L+ E+ +
Sbjct: 198 VWSFGILLTELTT 210
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 124/270 (45%), Gaps = 25/270 (9%)
Query: 249 ANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGF 308
++G G FG V+ G N + +A+K + + S E +F E ++ +L H LV+L G
Sbjct: 32 VQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGV 90
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
CLE+ LV+EF+ + L ++ R E + + G+ YL E +I
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 145
Query: 369 HRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVK 428
HRDL A N L+ K+SDFGM R F +D ++ + + +PE R+S K
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 204
Query: 429 SDIFSFGVLVLEIVSGQK--RSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMRGGSTS 486
SD++SFGVL+ E+ S K + E ED+ T L P +
Sbjct: 205 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST----------GFRLYKPRLASTHVY 254
Query: 487 EMMKCIHIGLLCVQENVSNRPGMASVVNML 516
++M H C +E +RP + ++ L
Sbjct: 255 QIMN--H----CWKERPEDRPAFSRLLRQL 278
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 104/193 (53%), Gaps = 7/193 (3%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCL 310
KLGQG FG V+ G + +A+K L + E F E ++ +L+H LV+L
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 311 ERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHR 370
E I V E++ SL F+ + ++ + + IA G+ Y+ R+ +HR
Sbjct: 74 EEPIXI-VTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 128
Query: 371 DLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSD 430
DL+A+NIL+ + K++DFG+ARL E D + + APE ++GRF++KSD
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLIE-DNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 187
Query: 431 IFSFGVLVLEIVS 443
++SFG+L+ E+ +
Sbjct: 188 VWSFGILLTELTT 200
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 105/193 (54%), Gaps = 7/193 (3%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCL 310
KLGQG FG V+ G + +A+K L + E F E ++ +L+H LV+L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 311 ERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHR 370
E I V E++ SL F+ + ++ + + IA G+ Y+ R+ +HR
Sbjct: 81 EEPIYI-VTEYMNKGSLLDFLKGETGK-YLRLPQLVDMSAQIASGMAYVE---RMNYVHR 135
Query: 371 DLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSD 430
DL+A+NIL+ + K++DFG+ARL E D ++ + APE ++GRF++KSD
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 431 IFSFGVLVLEIVS 443
++SFG+L+ E+ +
Sbjct: 195 VWSFGILLTELTT 207
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 148/285 (51%), Gaps = 37/285 (12%)
Query: 245 NFSDANKLGQGGFGAVYKGML---SNGE-TIAVKRLSKN-SKQGEIEFKNEVLLLARLQH 299
N S +G G FG V G L S E ++A+K L +++ +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 300 RNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIE------GIA 353
N++RL G + K ++V E++ N SLD F+ R+H + ++ +I+ GIA
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-----RKH---DAQFTVIQLVGMLRGIA 157
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-F 412
G+ YL S + +HRDL A NIL++S + K+SDFG+ R+ E D + T R
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPI 214
Query: 413 GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAA 472
+ +PE + + +F+ SD++S+G+++ E++S +R + E +D++ +EG
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--EMSNQDVIKAV----DEG-- 266
Query: 473 LNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVNMLN 517
L P + ++M L C Q++ +NRP +V++L+
Sbjct: 267 YRLPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILD 305
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 105/193 (54%), Gaps = 7/193 (3%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCL 310
KLGQG FG V+ G + +A+K L + E F E ++ +L+H LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 311 ERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHR 370
E I V E++ L F+ + + ++ + + IA G+ Y+ R+ +HR
Sbjct: 84 EEPIYI-VTEYMSKGCLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 371 DLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSD 430
DL+A+NIL+ + K++DFG+ARL E D ++ + APE ++GRF++KSD
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 431 IFSFGVLVLEIVS 443
++SFG+L+ E+ +
Sbjct: 198 VWSFGILLTELTT 210
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 124/270 (45%), Gaps = 25/270 (9%)
Query: 249 ANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGF 308
++G G FG V+ G N + +A+K + + + E +F E ++ +L H LV+L G
Sbjct: 10 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGV 68
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
CLE+ LV+EF+ + L ++ R E + + G+ YL E +I
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 123
Query: 369 HRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVK 428
HRDL A N L+ K+SDFGM R F +D ++ + + +PE R+S K
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 182
Query: 429 SDIFSFGVLVLEIVSGQK--RSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMRGGSTS 486
SD++SFGVL+ E+ S K + E ED+ T L P +
Sbjct: 183 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST----------GFRLYKPRLASTHVY 232
Query: 487 EMMKCIHIGLLCVQENVSNRPGMASVVNML 516
++M H C +E +RP + ++ L
Sbjct: 233 QIMN--H----CWKERPEDRPAFSRLLRQL 256
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 106/198 (53%), Gaps = 6/198 (3%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEI--EFKNEVLLLARLQHRNLVRLLGF 308
K+G G FG V++ +G +AVK L + E EF EV ++ RL+H N+V +G
Sbjct: 44 KIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
+ +V E++ SL + RE + +R + +A+G+ YLH + I+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIV 161
Query: 369 HRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVK 428
HRDLK+ N+L+D + K+ DFG++RL + GT +MAPE + + K
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDEPSNEK 219
Query: 429 SDIFSFGVLVLEIVSGQK 446
SD++SFGV++ E+ + Q+
Sbjct: 220 SDVYSFGVILWELATLQQ 237
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 105/193 (54%), Gaps = 7/193 (3%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCL 310
KLGQG FG V+ G + +A+K L + E F E ++ +L+H LV+L
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 311 ERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHR 370
E I V E++ SL F+ + + ++ + + IA G+ Y+ R+ +HR
Sbjct: 251 EEPIYI-VTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 305
Query: 371 DLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSD 430
DL+A+NIL+ + K++DFG+ RL E D ++ + APE ++GRF++KSD
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 364
Query: 431 IFSFGVLVLEIVS 443
++SFG+L+ E+ +
Sbjct: 365 VWSFGILLTELTT 377
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 124/270 (45%), Gaps = 25/270 (9%)
Query: 249 ANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGF 308
++G G FG V+ G N + +A+K + + + E +F E ++ +L H LV+L G
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGV 70
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
CLE+ LV+EF+ + L ++ R E + + G+ YL E +I
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 125
Query: 369 HRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVK 428
HRDL A N L+ K+SDFGM R F +D ++ + + +PE R+S K
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 429 SDIFSFGVLVLEIVSGQK--RSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMRGGSTS 486
SD++SFGVL+ E+ S K + E ED+ T L P +
Sbjct: 185 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST----------GFRLYKPRLASTHVY 234
Query: 487 EMMKCIHIGLLCVQENVSNRPGMASVVNML 516
++M H C +E +RP + ++ L
Sbjct: 235 QIMN--H----CWKERPEDRPAFSRLLRQL 258
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 124/270 (45%), Gaps = 25/270 (9%)
Query: 249 ANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGF 308
++G G FG V+ G N + +A+K + + + E +F E ++ +L H LV+L G
Sbjct: 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGV 73
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
CLE+ LV+EF+ + L ++ R E + + G+ YL E +I
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 128
Query: 369 HRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVK 428
HRDL A N L+ K+SDFGM R F +D ++ + + +PE R+S K
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 187
Query: 429 SDIFSFGVLVLEIVSGQK--RSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMRGGSTS 486
SD++SFGVL+ E+ S K + E ED+ T L P +
Sbjct: 188 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST----------GFRLYKPRLASTHVY 237
Query: 487 EMMKCIHIGLLCVQENVSNRPGMASVVNML 516
++M H C +E +RP + ++ L
Sbjct: 238 QIMN--H----CWRERPEDRPAFSRLLRQL 261
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 23/207 (11%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVKRLSKNSKQG---EIE-FKNEVLLLARLQHRNLVRLLG 307
+G GGFG VY+ G+ +AVK + + IE + E L A L+H N++ L G
Sbjct: 15 IGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 308 FCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRI 367
CL+ LV EF L+ + + + + + IARG+ YLH+++ + I
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVL----SGKRIPPDILVNWAVQIARGMNYLHDEAIVPI 129
Query: 368 IHRDLKASNILLDSEMNP--------KISDFGMARLFEMDQTHSDTN-RVVGTFGYMAPE 418
IHRDLK+SNIL+ ++ KI+DFG+AR + H T G + +MAPE
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAAGAYAWMAPE 184
Query: 419 YVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
+ FS SD++S+GVL+ E+++G+
Sbjct: 185 VIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 104/193 (53%), Gaps = 7/193 (3%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCL 310
KLGQG FG V+ G + +A+K L + E F E ++ +L+H LV+L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 311 ERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHR 370
E I V E++ SL F+ + ++ + + IA G+ Y+ R+ +HR
Sbjct: 81 EEPIYI-VTEYMNKGSLLDFLKGETGK-YLRLPQLVDMSAQIASGMAYVE---RMNYVHR 135
Query: 371 DLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSD 430
DL+A+NIL+ + K++DFG+ARL E D + + APE ++GRF++KSD
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIE-DNEWTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 431 IFSFGVLVLEIVS 443
++SFG+L+ E+ +
Sbjct: 195 VWSFGILLTELTT 207
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 148/285 (51%), Gaps = 37/285 (12%)
Query: 245 NFSDANKLGQGGFGAVYKGML---SNGE-TIAVKRLSKN-SKQGEIEFKNEVLLLARLQH 299
N S +G G FG V G L S E ++A+K L +++ +F E ++ + H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 300 RNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIE------GIA 353
N++RL G + K ++V E + N SLD F+ R+H + ++ +I+ GIA
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL-----RKH---DAQFTVIQLVGMLRGIA 128
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-F 412
G+ YL S + +HRDL A NIL++S + K+SDFG++R+ E D + T R
Sbjct: 129 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 413 GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAA 472
+ +PE + + +F+ SD++S+G+++ E++S +R + E +D++ +EG
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--EMSNQDVIKAV----DEG-- 237
Query: 473 LNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVNMLN 517
L P + ++M L C Q++ +NRP +V++L+
Sbjct: 238 YRLPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILD 276
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 148/285 (51%), Gaps = 37/285 (12%)
Query: 245 NFSDANKLGQGGFGAVYKGML---SNGE-TIAVKRLSKN-SKQGEIEFKNEVLLLARLQH 299
N S +G G FG V G L S E ++A+K L +++ +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 300 RNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIE------GIA 353
N++RL G + K ++V E + N SLD F+ R+H + ++ +I+ GIA
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL-----RKH---DAQFTVIQLVGMLRGIA 157
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-F 412
G+ YL S + +HRDL A NIL++S + K+SDFG++R+ E D + T R
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 413 GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAA 472
+ +PE + + +F+ SD++S+G+++ E++S +R + E +D++ +EG
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--EMSNQDVIKAV----DEG-- 266
Query: 473 LNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVNMLN 517
L P + ++M L C Q++ +NRP +V++L+
Sbjct: 267 YRLPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 148/285 (51%), Gaps = 37/285 (12%)
Query: 245 NFSDANKLGQGGFGAVYKGML---SNGE-TIAVKRLSKN-SKQGEIEFKNEVLLLARLQH 299
N S +G G FG V G L S E ++A+K L +++ +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 300 RNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIE------GIA 353
N++RL G + K ++V E + N SLD F+ R+H + ++ +I+ GIA
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL-----RKH---DAQFTVIQLVGMLRGIA 157
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-F 412
G+ YL S + +HRDL A NIL++S + K+SDFG++R+ E D + T R
Sbjct: 158 SGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 413 GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAA 472
+ +PE + + +F+ SD++S+G+++ E++S +R + E +D++ +EG
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--EMSNQDVIKAV----DEG-- 266
Query: 473 LNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVNMLN 517
L P + ++M L C Q++ +NRP +V++L+
Sbjct: 267 YRLPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILD 305
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 13/207 (6%)
Query: 251 KLGQGGFGAV----YKGMLSN-GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRL 305
+LG+G FG+V Y + N GE +AVK+L ++++ +F+ E+ +L LQH N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 306 LGFCLE--RKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
G C R+ L+ EF+P SL ++ ++E + K + I +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYL--QKHKERIDHIKLLQYTSQICKGMEYL---G 134
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-FGYMAPEYVMH 422
R IHRDL NIL+++E KI DFG+ ++ D+ + + APE +
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 423 GRFSVKSDIFSFGVLVLEIVSGQKRSS 449
+FSV SD++SFGV++ E+ + ++S
Sbjct: 195 SKFSVASDVWSFGVVLYELFTYIEKSK 221
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 109/202 (53%), Gaps = 16/202 (7%)
Query: 252 LGQGGFGAV----YKGMLSN-GETIAVKRLSKNSKQGEI-EFKNEVLLLARLQHRNLVRL 305
LG+G FG V Y N GE +AVK L S I + K E+ +L L H N+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 306 LGFCLERKER--ILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
G C E L+ EF+P+ SL ++ P N+ + +++ K I +G+ YL S
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYL--GS 144
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDT--NRVVGTFGYMAPEYVM 421
R + +HRDL A N+L++SE KI DFG+ + E D+ +R F Y APE +M
Sbjct: 145 R-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLM 202
Query: 422 HGRFSVKSDIFSFGVLVLEIVS 443
+F + SD++SFGV + E+++
Sbjct: 203 QSKFYIASDVWSFGVTLHELLT 224
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 106/210 (50%), Gaps = 6/210 (2%)
Query: 234 FDFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLL 293
+D + + ++ +LG G FG V+ G +N +AVK L + + F E L
Sbjct: 3 WDKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQ-AFLEEANL 61
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
+ LQH LVRL + ++ E++ SL F+ + + K IA
Sbjct: 62 MKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLL-PKLIDFSAQIA 120
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
G+ Y+ R IHRDL+A+N+L+ + KI+DFG+AR+ E D ++
Sbjct: 121 EGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIE-DNEYTAREGAKFPIK 176
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ APE + G F++KSD++SFG+L+ EIV+
Sbjct: 177 WTAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 123/270 (45%), Gaps = 25/270 (9%)
Query: 249 ANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGF 308
++G G FG V+ G N + +A+K + + + E +F E ++ +L H LV+L G
Sbjct: 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGV 71
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
CLE+ LV EF+ + L ++ R E + + G+ YL E +I
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 126
Query: 369 HRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVK 428
HRDL A N L+ K+SDFGM R F +D ++ + + +PE R+S K
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 185
Query: 429 SDIFSFGVLVLEIVSGQK--RSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMRGGSTS 486
SD++SFGVL+ E+ S K + E ED+ T L P +
Sbjct: 186 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST----------GFRLYKPRLASTHVY 235
Query: 487 EMMKCIHIGLLCVQENVSNRPGMASVVNML 516
++M H C +E +RP + ++ L
Sbjct: 236 QIMN--H----CWRERPEDRPAFSRLLRQL 259
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 109/202 (53%), Gaps = 16/202 (7%)
Query: 252 LGQGGFGAV----YKGMLSN-GETIAVKRLSKNSKQGEI-EFKNEVLLLARLQHRNLVRL 305
LG+G FG V Y N GE +AVK L S I + K E+ +L L H N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 306 LGFCLERKER--ILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
G C E L+ EF+P+ SL ++ P N+ + +++ K I +G+ YL S
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYL--GS 132
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDT--NRVVGTFGYMAPEYVM 421
R + +HRDL A N+L++SE KI DFG+ + E D+ +R F Y APE +M
Sbjct: 133 R-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLM 190
Query: 422 HGRFSVKSDIFSFGVLVLEIVS 443
+F + SD++SFGV + E+++
Sbjct: 191 QSKFYIASDVWSFGVTLHELLT 212
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 108/195 (55%), Gaps = 7/195 (3%)
Query: 250 NKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGF 308
+KLG G +G VY G+ T+AVK L +++ + E EF E ++ ++H NLV+LLG
Sbjct: 38 HKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 96
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
C +V E++P +L ++ + NRE +T + I+ + YL + + I
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYLRE-CNREEVTAVVLLYMATQISSAMEYLEKKN---FI 152
Query: 369 HRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVK 428
HRDL A N L+ K++DFG++RL D T++ + APE + + FS+K
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNTFSIK 211
Query: 429 SDIFSFGVLVLEIVS 443
SD+++FGVL+ EI +
Sbjct: 212 SDVWAFGVLLWEIAT 226
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 113/208 (54%), Gaps = 13/208 (6%)
Query: 250 NKLGQGGFGAV----YKGMLSN-GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
+LG+G FG+V Y + N GE +AVK+L ++++ +F+ E+ +L LQH N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 305 LLGFCLE--RKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
G C R+ L+ E++P SL ++ ++E + K + I +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 130
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-FGYMAPEYVM 421
R IHRDL NIL+++E KI DFG+ ++ D+ + + APE +
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 422 HGRFSVKSDIFSFGVLVLEIVSGQKRSS 449
+FSV SD++SFGV++ E+ + ++S
Sbjct: 191 ESKFSVASDVWSFGVVLYELFTYIEKSK 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 113/208 (54%), Gaps = 13/208 (6%)
Query: 250 NKLGQGGFGAV----YKGMLSN-GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
+LG+G FG+V Y + N GE +AVK+L ++++ +F+ E+ +L LQH N+V+
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 305 LLGFCLE--RKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
G C R+ L+ E++P SL ++ ++E + K + I +G+ YL
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 135
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-FGYMAPEYVM 421
R IHRDL NIL+++E KI DFG+ ++ D+ + + APE +
Sbjct: 136 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 195
Query: 422 HGRFSVKSDIFSFGVLVLEIVSGQKRSS 449
+FSV SD++SFGV++ E+ + ++S
Sbjct: 196 ESKFSVASDVWSFGVVLYELFTYIEKSK 223
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 103/217 (47%), Gaps = 17/217 (7%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGET------IAVKRLSK-NSKQGEIEFKNEVLL 293
V N + LG G FG VY+G +S +AVK L + S+Q E++F E L+
Sbjct: 42 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 101
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFD----PINREHMTWEKRYKII 349
+++L H+N+VR +G L+ R ++ E + L F+ + P + +
Sbjct: 102 ISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 161
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSE---MNPKISDFGMARLFEMDQTHSDTN 406
IA G YL E+ IHRD+ A N LL KI DFGMAR +
Sbjct: 162 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 218
Query: 407 RVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ +M PE M G F+ K+D +SFGVL+ EI S
Sbjct: 219 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 103/217 (47%), Gaps = 17/217 (7%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGET------IAVKRLSK-NSKQGEIEFKNEVLL 293
V N + LG G FG VY+G +S +AVK L + S+Q E++F E L+
Sbjct: 28 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 87
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFD----PINREHMTWEKRYKII 349
+++L H+N+VR +G L+ R ++ E + L F+ + P + +
Sbjct: 88 ISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 147
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSE---MNPKISDFGMARLFEMDQTHSDTN 406
IA G YL E+ IHRD+ A N LL KI DFGMAR +
Sbjct: 148 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 204
Query: 407 RVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ +M PE M G F+ K+D +SFGVL+ EI S
Sbjct: 205 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 113/207 (54%), Gaps = 13/207 (6%)
Query: 250 NKLGQGGFGAV----YKGMLSN-GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
+LG+G FG+V Y + N GE +AVK+L ++++ +F+ E+ +L LQH N+V+
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 305 LLGFCLE--RKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
G C R+ L+ E++P SL ++ ++E + K + I +G+ YL
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 137
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-FGYMAPEYVM 421
R IHRDL NIL+++E KI DFG+ ++ D+ + + APE +
Sbjct: 138 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 197
Query: 422 HGRFSVKSDIFSFGVLVLEIVSGQKRS 448
+FSV SD++SFGV++ E+ + ++S
Sbjct: 198 ESKFSVASDVWSFGVVLYELFTYIEKS 224
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 104/194 (53%), Gaps = 7/194 (3%)
Query: 250 NKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
+LG G FG V+ G + +A+K L + E F E ++ +L+H LV+L
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE-SFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 310 LERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIH 369
E I V E++ SL F+ D R + + +A G+ Y+ R+ IH
Sbjct: 74 SEEPIYI-VTEYMNKGSLLDFLKDGEGRA-LKLPNLVDMAAQVAAGMAYIE---RMNYIH 128
Query: 370 RDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKS 429
RDL+++NIL+ + + KI+DFG+ARL E D + + APE ++GRF++KS
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARLIE-DNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 430 DIFSFGVLVLEIVS 443
D++SFG+L+ E+V+
Sbjct: 188 DVWSFGILLTELVT 201
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 113/207 (54%), Gaps = 13/207 (6%)
Query: 250 NKLGQGGFGAV----YKGMLSN-GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
+LG+G FG+V Y + N GE +AVK+L ++++ +F+ E+ +L LQH N+V+
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 305 LLGFCLE--RKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
G C R+ L+ E++P SL ++ ++E + K + I +G+ YL
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 161
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-FGYMAPEYVM 421
R IHRDL NIL+++E KI DFG+ ++ D+ + + APE +
Sbjct: 162 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 221
Query: 422 HGRFSVKSDIFSFGVLVLEIVSGQKRS 448
+FSV SD++SFGV++ E+ + ++S
Sbjct: 222 ESKFSVASDVWSFGVVLYELFTYIEKS 248
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 113/208 (54%), Gaps = 13/208 (6%)
Query: 250 NKLGQGGFGAV----YKGMLSN-GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
+LG+G FG+V Y + N GE +AVK+L ++++ +F+ E+ +L LQH N+V+
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 305 LLGFCLE--RKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
G C R+ L+ E++P SL ++ ++E + K + I +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 133
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-FGYMAPEYVM 421
R IHRDL NIL+++E KI DFG+ ++ D+ + + APE +
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 422 HGRFSVKSDIFSFGVLVLEIVSGQKRSS 449
+FSV SD++SFGV++ E+ + ++S
Sbjct: 194 ESKFSVASDVWSFGVVLYELFTYIEKSK 221
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 101/194 (52%), Gaps = 6/194 (3%)
Query: 250 NKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
KLG G FG V+ G +N +AVK L + + F E L+ LQH LVRL
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQ-AFLEEANLMKTLQHDKLVRLYAVV 76
Query: 310 LERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIH 369
+ + ++ EF+ SL F+ + + K IA G+ Y+ R IH
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL-PKLIDFSAQIAEGMAYIE---RKNYIH 132
Query: 370 RDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKS 429
RDL+A+N+L+ + KI+DFG+AR+ E D ++ + APE + G F++KS
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 430 DIFSFGVLVLEIVS 443
+++SFG+L+ EIV+
Sbjct: 192 NVWSFGILLYEIVT 205
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 113/208 (54%), Gaps = 13/208 (6%)
Query: 250 NKLGQGGFGAV----YKGMLSN-GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
+LG+G FG+V Y + N GE +AVK+L ++++ +F+ E+ +L LQH N+V+
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 305 LLGFCLE--RKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
G C R+ L+ E++P SL ++ ++E + K + I +G+ YL
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 129
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-FGYMAPEYVM 421
R IHRDL NIL+++E KI DFG+ ++ D+ + + APE +
Sbjct: 130 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 189
Query: 422 HGRFSVKSDIFSFGVLVLEIVSGQKRSS 449
+FSV SD++SFGV++ E+ + ++S
Sbjct: 190 ESKFSVASDVWSFGVVLYELFTYIEKSK 217
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 113/208 (54%), Gaps = 13/208 (6%)
Query: 250 NKLGQGGFGAV----YKGMLSN-GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
+LG+G FG+V Y + N GE +AVK+L ++++ +F+ E+ +L LQH N+V+
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 305 LLGFCLE--RKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
G C R+ L+ E++P SL ++ ++E + K + I +G+ YL
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 128
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-FGYMAPEYVM 421
R IHRDL NIL+++E KI DFG+ ++ D+ + + APE +
Sbjct: 129 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 188
Query: 422 HGRFSVKSDIFSFGVLVLEIVSGQKRSS 449
+FSV SD++SFGV++ E+ + ++S
Sbjct: 189 ESKFSVASDVWSFGVVLYELFTYIEKSK 216
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 113/208 (54%), Gaps = 13/208 (6%)
Query: 250 NKLGQGGFGAV----YKGMLSN-GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
+LG+G FG+V Y + N GE +AVK+L ++++ +F+ E+ +L LQH N+V+
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 305 LLGFCLE--RKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
G C R+ L+ E++P SL ++ ++E + K + I +G+ YL
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 136
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-FGYMAPEYVM 421
R IHRDL NIL+++E KI DFG+ ++ D+ + + APE +
Sbjct: 137 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 196
Query: 422 HGRFSVKSDIFSFGVLVLEIVSGQKRSS 449
+FSV SD++SFGV++ E+ + ++S
Sbjct: 197 ESKFSVASDVWSFGVVLYELFTYIEKSK 224
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 113/208 (54%), Gaps = 13/208 (6%)
Query: 250 NKLGQGGFGAV----YKGMLSN-GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
+LG+G FG+V Y + N GE +AVK+L ++++ +F+ E+ +L LQH N+V+
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 305 LLGFCLE--RKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
G C R+ L+ E++P SL ++ ++E + K + I +G+ YL
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 134
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-FGYMAPEYVM 421
R IHRDL NIL+++E KI DFG+ ++ D+ + + APE +
Sbjct: 135 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 194
Query: 422 HGRFSVKSDIFSFGVLVLEIVSGQKRSS 449
+FSV SD++SFGV++ E+ + ++S
Sbjct: 195 ESKFSVASDVWSFGVVLYELFTYIEKSK 222
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 113/208 (54%), Gaps = 13/208 (6%)
Query: 250 NKLGQGGFGAV----YKGMLSN-GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
+LG+G FG+V Y + N GE +AVK+L ++++ +F+ E+ +L LQH N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 305 LLGFCLE--RKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
G C R+ L+ E++P SL ++ ++E + K + I +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 130
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-FGYMAPEYVM 421
R IHRDL NIL+++E KI DFG+ ++ D+ + + APE +
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 422 HGRFSVKSDIFSFGVLVLEIVSGQKRSS 449
+FSV SD++SFGV++ E+ + ++S
Sbjct: 191 ESKFSVASDVWSFGVVLYELFTYIEKSK 218
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 113/208 (54%), Gaps = 13/208 (6%)
Query: 250 NKLGQGGFGAV----YKGMLSN-GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
+LG+G FG+V Y + N GE +AVK+L ++++ +F+ E+ +L LQH N+V+
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 305 LLGFCLE--RKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
G C R+ L+ E++P SL ++ ++E + K + I +G+ YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 148
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-FGYMAPEYVM 421
R IHRDL NIL+++E KI DFG+ ++ D+ + + APE +
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 422 HGRFSVKSDIFSFGVLVLEIVSGQKRSS 449
+FSV SD++SFGV++ E+ + ++S
Sbjct: 209 ESKFSVASDVWSFGVVLYELFTYIEKSK 236
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 113/208 (54%), Gaps = 13/208 (6%)
Query: 250 NKLGQGGFGAV----YKGMLSN-GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
+LG+G FG+V Y + N GE +AVK+L ++++ +F+ E+ +L LQH N+V+
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 305 LLGFCLE--RKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
G C R+ L+ E++P SL ++ ++E + K + I +G+ YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 148
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-FGYMAPEYVM 421
R IHRDL NIL+++E KI DFG+ ++ D+ + + APE +
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 422 HGRFSVKSDIFSFGVLVLEIVSGQKRSS 449
+FSV SD++SFGV++ E+ + ++S
Sbjct: 209 ESKFSVASDVWSFGVVLYELFTYIEKSK 236
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 112/208 (53%), Gaps = 13/208 (6%)
Query: 250 NKLGQGGFGAV----YKGMLSN-GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
+LG+G FG+V Y + N GE +AVK+L ++++ +F+ E+ +L LQH N+V+
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 305 LLGFCLE--RKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
G C R+ L+ E++P SL ++ + E + K + I +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QAHAERIDHIKLLQYTSQICKGMEYL--- 133
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-FGYMAPEYVM 421
R IHRDL NIL+++E KI DFG+ ++ D+ + + APE +
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 422 HGRFSVKSDIFSFGVLVLEIVSGQKRSS 449
+FSV SD++SFGV++ E+ + ++S
Sbjct: 194 ESKFSVASDVWSFGVVLYELFTYIEKSK 221
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 134/276 (48%), Gaps = 33/276 (11%)
Query: 252 LGQGGFGAVYKGMLS----NGETIAVKRLSKN-SKQGEIEFKNEVLLLARLQHRNLVRLL 306
+G G FG V G L +A+K L + + +F +E ++ + H N++ L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
G + K +++ E++ N SLD F+ N T + ++ GI G+ YL S +
Sbjct: 97 GVVTKCKPVMIITEYMENGSLDAFLRK--NDGRFTVIQLVGMLRGIGSGMKYL---SDMS 151
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-FGYMAPEYVMHGRF 425
+HRDL A NIL++S + K+SDFGM+R+ E D + T R + APE + + +F
Sbjct: 152 AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 211
Query: 426 SVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMRGGST 485
+ SD++S+G+++ E++S Y R + + + +++ G
Sbjct: 212 TSASDVWSYGIVMWEVMS------------------YGERPYWDMSNQDVIKAIEEGYRL 253
Query: 486 SEMMKC---IHIGLL-CVQENVSNRPGMASVVNMLN 517
M C +H +L C Q+ S+RP +VNML+
Sbjct: 254 PPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLD 289
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 113/208 (54%), Gaps = 13/208 (6%)
Query: 250 NKLGQGGFGAV----YKGMLSN-GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
+LG+G FG+V Y + N GE +AVK+L ++++ +F+ E+ +L LQH N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 305 LLGFCLE--RKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
G C R+ L+ E++P SL ++ ++E + K + I +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 130
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-FGYMAPEYVM 421
R IHRDL NIL+++E KI DFG+ ++ D+ + + APE +
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT 190
Query: 422 HGRFSVKSDIFSFGVLVLEIVSGQKRSS 449
+FSV SD++SFGV++ E+ + ++S
Sbjct: 191 ESKFSVASDVWSFGVVLYELFTYIEKSK 218
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 115/218 (52%), Gaps = 33/218 (15%)
Query: 251 KLGQGGFGAVYKGML------SNGETIAVKRLSKNSKQGEI--EFKNEVLLLARLQHRNL 302
+LG+ FG VYKG L + +A+K L K+ +G + EF++E +L ARLQH N+
Sbjct: 16 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIF-------------DPINREHMTWEKRYKII 349
V LLG + + +++ + + L F+ D + + ++
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVV 409
IA G+ YL S ++H+DL N+L+ ++N KISD G+ R + +D +++
Sbjct: 135 AQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFR----EVYAADYYKLL 187
Query: 410 GT----FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
G +MAPE +M+G+FS+ SDI+S+GV++ E+ S
Sbjct: 188 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 115/218 (52%), Gaps = 33/218 (15%)
Query: 251 KLGQGGFGAVYKGML------SNGETIAVKRLSKNSKQGEI--EFKNEVLLLARLQHRNL 302
+LG+ FG VYKG L + +A+K L K+ +G + EF++E +L ARLQH N+
Sbjct: 33 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIF-------------DPINREHMTWEKRYKII 349
V LLG + + +++ + + L F+ D + + ++
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVV 409
IA G+ YL S ++H+DL N+L+ ++N KISD G+ R + +D +++
Sbjct: 152 AQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFR----EVYAADYYKLL 204
Query: 410 GT----FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
G +MAPE +M+G+FS+ SDI+S+GV++ E+ S
Sbjct: 205 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 137/275 (49%), Gaps = 29/275 (10%)
Query: 252 LGQGGFGAVYKGMLS-NGET---IAVKRL-SKNSKQGEIEFKNEVLLLARLQHRNLVRLL 306
+G G FG V G L G+ +A+K L S +++ +F +E ++ + H N++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
G + +++ EF+ N SLD F+ N T + ++ GIA G+ YL + +
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFLRQ--NDGQFTVIQLVGMLRGIAAGMKYLAD---MN 155
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVG---TFGYMAPEYVMHG 423
+HRDL A NIL++S + K+SDFG++R E D + +G + APE + +
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR 215
Query: 424 RFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMRGG 483
+F+ SD++S+G+++ E++S +R W N+ +N ++ R
Sbjct: 216 KFTSASDVWSYGIVMWEVMSYGERP--------------YWDMTNQD-VINAIEQDYRLP 260
Query: 484 STSEMMKCIHIGLL-CVQENVSNRPGMASVVNMLN 517
+ +H +L C Q++ ++RP +VN L+
Sbjct: 261 PPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 295
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGET------IAVKRLSK-NSKQGEIEFKNEVLL 293
V N + LG G FG VY+G +S +AVK L + S+Q E++F E L+
Sbjct: 19 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 78
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFD----PINREHMTWEKRYKII 349
+++ H+N+VR +G L+ R ++ E + L F+ + P + +
Sbjct: 79 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 138
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSE---MNPKISDFGMARLFEMDQTHSDTN 406
IA G YL E+ IHRD+ A N LL KI DFGMAR +
Sbjct: 139 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 195
Query: 407 RVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ +M PE M G F+ K+D +SFGVL+ EI S
Sbjct: 196 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGET------IAVKRLSK-NSKQGEIEFKNEVLL 293
V N + LG G FG VY+G +S +AVK L + S+Q E++F E L+
Sbjct: 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 86
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFD----PINREHMTWEKRYKII 349
+++ H+N+VR +G L+ R ++ E + L F+ + P + +
Sbjct: 87 ISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 146
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSE---MNPKISDFGMARLFEMDQTHSDTN 406
IA G YL E+ IHRD+ A N LL KI DFGMAR +
Sbjct: 147 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 203
Query: 407 RVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ +M PE M G F+ K+D +SFGVL+ EI S
Sbjct: 204 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGET------IAVKRLSK-NSKQGEIEFKNEVLL 293
V N + LG G FG VY+G +S +AVK L + S+Q E++F E L+
Sbjct: 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 86
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFD----PINREHMTWEKRYKII 349
+++ H+N+VR +G L+ R ++ E + L F+ + P + +
Sbjct: 87 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 146
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSE---MNPKISDFGMARLFEMDQTHSDTN 406
IA G YL E+ IHRD+ A N LL KI DFGMAR +
Sbjct: 147 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 203
Query: 407 RVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ +M PE M G F+ K+D +SFGVL+ EI S
Sbjct: 204 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGET------IAVKRLSK-NSKQGEIEFKNEVLL 293
V N + LG G FG VY+G +S +AVK L + S+Q E++F E L+
Sbjct: 44 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 103
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFD----PINREHMTWEKRYKII 349
+++ H+N+VR +G L+ R ++ E + L F+ + P + +
Sbjct: 104 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 163
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSE---MNPKISDFGMARLFEMDQTHSDTN 406
IA G YL E+ IHRD+ A N LL KI DFGMAR +
Sbjct: 164 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 220
Query: 407 RVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ +M PE M G F+ K+D +SFGVL+ EI S
Sbjct: 221 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 114/208 (54%), Gaps = 13/208 (6%)
Query: 250 NKLGQGGFGAV----YKGMLSN-GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
+LG+G FG+V Y + N GE +AVK+L ++++ +F+ E+ +L LQH N+V+
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 305 LLGFCLE--RKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
G C R+ L+ E++P SL ++ ++E + K + I +G+ YL
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 131
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-FGYMAPEYVM 421
R IHR+L NIL+++E KI DFG+ ++ D+ + + + APE +
Sbjct: 132 GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT 191
Query: 422 HGRFSVKSDIFSFGVLVLEIVSGQKRSS 449
+FSV SD++SFGV++ E+ + ++S
Sbjct: 192 ESKFSVASDVWSFGVVLYELFTYIEKSK 219
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 134/276 (48%), Gaps = 33/276 (11%)
Query: 252 LGQGGFGAVYKGMLS----NGETIAVKRLSKN-SKQGEIEFKNEVLLLARLQHRNLVRLL 306
+G G FG V G L +A+K L + + +F +E ++ + H N++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
G + K +++ E++ N SLD F+ N T + ++ GI G+ YL S +
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLRK--NDGRFTVIQLVGMLRGIGSGMKYL---SDMS 136
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-FGYMAPEYVMHGRF 425
+HRDL A NIL++S + K+SDFGM+R+ E D + T R + APE + + +F
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 196
Query: 426 SVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMRGGST 485
+ SD++S+G+++ E++S Y R + + + +++ G
Sbjct: 197 TSASDVWSYGIVMWEVMS------------------YGERPYWDMSNQDVIKAIEEGYRL 238
Query: 486 SEMMKC---IHIGLL-CVQENVSNRPGMASVVNMLN 517
M C +H +L C Q+ S+RP +VNML+
Sbjct: 239 PPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLD 274
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 106/200 (53%), Gaps = 9/200 (4%)
Query: 249 ANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGF 308
++G G FG VYKG + + ++ + Q FKNEV +L + +H N++ +G+
Sbjct: 17 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
+ + +V ++ +SL H + + M +K I ARG+ YLH S II
Sbjct: 77 S-TKPQLAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAKS---II 130
Query: 369 HRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVM---HGRF 425
HRDLK++NI L + KI DFG+A + ++ G+ +MAPE + +
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 190
Query: 426 SVKSDIFSFGVLVLEIVSGQ 445
S +SD+++FG+++ E+++GQ
Sbjct: 191 SFQSDVYAFGIVLYELMTGQ 210
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 134/276 (48%), Gaps = 33/276 (11%)
Query: 252 LGQGGFGAVYKGMLS----NGETIAVKRLSKN-SKQGEIEFKNEVLLLARLQHRNLVRLL 306
+G G FG V G L +A+K L + + +F +E ++ + H N++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
G + K +++ E++ N SLD F+ N T + ++ GI G+ YL S +
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRK--NDGRFTVIQLVGMLRGIGSGMKYL---SDMS 130
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-FGYMAPEYVMHGRF 425
+HRDL A NIL++S + K+SDFGM+R+ E D + T R + APE + + +F
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 190
Query: 426 SVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMRGGST 485
+ SD++S+G+++ E++S Y R + + + +++ G
Sbjct: 191 TSASDVWSYGIVMWEVMS------------------YGERPYWDMSNQDVIKAIEEGYRL 232
Query: 486 SEMMKC---IHIGLL-CVQENVSNRPGMASVVNMLN 517
M C +H +L C Q+ S+RP +VNML+
Sbjct: 233 PPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLD 268
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGET------IAVKRLSK-NSKQGEIEFKNEVLL 293
V N + LG G FG VY+G +S +AVK L + S+Q E++F E L+
Sbjct: 42 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALI 101
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFD----PINREHMTWEKRYKII 349
+++ H+N+VR +G L+ R ++ E + L F+ + P + +
Sbjct: 102 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 161
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSE---MNPKISDFGMARLFEMDQTHSDTN 406
IA G YL E+ IHRD+ A N LL KI DFGMAR +
Sbjct: 162 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 218
Query: 407 RVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ +M PE M G F+ K+D +SFGVL+ EI S
Sbjct: 219 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGET------IAVKRLSK-NSKQGEIEFKNEVLL 293
V N + LG G FG VY+G +S +AVK L + S+Q E++F E L+
Sbjct: 28 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 87
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFD----PINREHMTWEKRYKII 349
+++ H+N+VR +G L+ R ++ E + L F+ + P + +
Sbjct: 88 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 147
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSE---MNPKISDFGMARLFEMDQTHSDTN 406
IA G YL E+ IHRD+ A N LL KI DFGMAR +
Sbjct: 148 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 204
Query: 407 RVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ +M PE M G F+ K+D +SFGVL+ EI S
Sbjct: 205 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGET------IAVKRLSK-NSKQGEIEFKNEVLL 293
V N + LG G FG VY+G +S +AVK L + S+Q E++F E L+
Sbjct: 42 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 101
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFD----PINREHMTWEKRYKII 349
+++ H+N+VR +G L+ R ++ E + L F+ + P + +
Sbjct: 102 ISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 161
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSE---MNPKISDFGMARLFEMDQTHSDTN 406
IA G YL E+ IHRD+ A N LL KI DFGMAR +
Sbjct: 162 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 218
Query: 407 RVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ +M PE M G F+ K+D +SFGVL+ EI S
Sbjct: 219 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGET------IAVKRLSK-NSKQGEIEFKNEVLL 293
V N + LG G FG VY+G +S +AVK L + S+Q E++F E L+
Sbjct: 34 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 93
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFD----PINREHMTWEKRYKII 349
+++ H+N+VR +G L+ R ++ E + L F+ + P + +
Sbjct: 94 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 153
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSE---MNPKISDFGMARLFEMDQTHSDTN 406
IA G YL E+ IHRD+ A N LL KI DFGMAR +
Sbjct: 154 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 210
Query: 407 RVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ +M PE M G F+ K+D +SFGVL+ EI S
Sbjct: 211 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 115/210 (54%), Gaps = 7/210 (3%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLL 293
+++ + + + +KLG G +G VY+G+ T+AVK L +++ + E EF E +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 67
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
+ ++H NLV+LLG C ++ EF+ +L ++ + NR+ ++ + I+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQIS 126
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ YL + + IHRDL A N L+ K++DFG++RL D T++
Sbjct: 127 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIK 182
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ APE + + +FS+KSD+++FGVL+ EI +
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 138/280 (49%), Gaps = 23/280 (8%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLL 293
+++ + + + +KLG G +G VY+G+ T+AVK L +++ + E EF E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
+ ++H NLV+LLG C ++ EF+ +L ++ + NR+ ++ + I+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQIS 121
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ YL + + IHRDL A N L+ K++DFG++RL D T++
Sbjct: 122 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIK 177
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTE-EETEDLLTYAWRNWNEGAA 472
+ APE + + +FS+KSD+++FGVL+ EI + G + + +LL +R
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR------- 230
Query: 473 LNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASV 512
+ P E+M+ C Q N S+RP A +
Sbjct: 231 --MERPEGCPEKVYELMRA------CWQWNPSDRPSFAEI 262
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGET------IAVKRLSK-NSKQGEIEFKNEVLL 293
V N + LG G FG VY+G +S +AVK L + S+Q E++F E L+
Sbjct: 45 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 104
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFD----PINREHMTWEKRYKII 349
+++ H+N+VR +G L+ R ++ E + L F+ + P + +
Sbjct: 105 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 164
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSE---MNPKISDFGMARLFEMDQTHSDTN 406
IA G YL E+ IHRD+ A N LL KI DFGMAR +
Sbjct: 165 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGG 221
Query: 407 RVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ +M PE M G F+ K+D +SFGVL+ EI S
Sbjct: 222 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 115/210 (54%), Gaps = 7/210 (3%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLL 293
+++ + + + +KLG G +G VY+G+ T+AVK L +++ + E EF E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
+ ++H NLV+LLG C ++ EF+ +L ++ + NR+ ++ + I+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQIS 121
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ YL + + IHRDL A N L+ K++DFG++RL D T++
Sbjct: 122 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIK 177
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ APE + + +FS+KSD+++FGVL+ EI +
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 23/280 (8%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLL 293
+++ + + + +KLG G +G VY+G+ T+AVK L +++ + E EF E +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 67
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
+ ++H NLV+LLG C ++ EF+ +L ++ + NR+ + + I+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQIS 126
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ YL + + IHRDL A N L+ K++DFG++RL D T++
Sbjct: 127 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIK 182
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTE-EETEDLLTYAWRNWNEGAA 472
+ APE + + +FS+KSD+++FGVL+ EI + G + + +LL +R
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR------- 235
Query: 473 LNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASV 512
+ P E+M+ C Q N S+RP A +
Sbjct: 236 --MERPEGCPEKVYELMRA------CWQWNPSDRPSFAEI 267
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 136/272 (50%), Gaps = 25/272 (9%)
Query: 252 LGQGGFGAVYKGMLS----NGETIAVKRLSKN-SKQGEIEFKNEVLLLARLQHRNLVRLL 306
+G G FG V G L +A+K L +++ +F E ++ + H N++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
G + K ++V E++ N SLD F+ N T + ++ GI+ G+ YL S +
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLKK--NDGQFTVIQLVGMLRGISAGMKYL---SDMG 144
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-FGYMAPEYVMHGRF 425
+HRDL A NIL++S + K+SDFG++R+ E D + T R + APE + +F
Sbjct: 145 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKF 204
Query: 426 SVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMRGGST 485
+ SD++S+G+++ E+VS +R + E +D++ EG L P +
Sbjct: 205 TSASDVWSYGIVMWEVVSYGERPYW--EMTNQDVIKAV----EEG--YRLPSPMDCPAAL 256
Query: 486 SEMMKCIHIGLLCVQENVSNRPGMASVVNMLN 517
++M L C Q+ ++RP +VNML+
Sbjct: 257 YQLM------LDCWQKERNSRPKFDEIVNMLD 282
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 118/229 (51%), Gaps = 11/229 (4%)
Query: 220 EDENVEETIAKSLQFDFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKN 279
ED N +T+ + D + + ++G G FG VYKG + + ++
Sbjct: 14 EDRNRMKTLGRRDSSD--DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAP 71
Query: 280 SKQGEIEFKNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREH 339
+ Q FKNEV +L + +H N++ +G+ + + +V ++ +SL H + +
Sbjct: 72 TPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFE 130
Query: 340 MTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMD 399
M K I A+G+ YLH S IIHRDLK++NI L ++ KI DFG+A +
Sbjct: 131 MI--KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 185
Query: 400 QTHSDTNRVVGTFGYMAPEYV-MHGR--FSVKSDIFSFGVLVLEIVSGQ 445
++ G+ +MAPE + M + +S +SD+++FG+++ E+++GQ
Sbjct: 186 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 115/210 (54%), Gaps = 7/210 (3%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLL 293
+++ + + + +KLG G +G VY+G+ T+AVK L +++ + E EF E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
+ ++H NLV+LLG C ++ EF+ +L ++ + NR+ ++ + I+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQIS 121
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ YL + + IHRDL A N L+ K++DFG++RL D T++
Sbjct: 122 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIK 177
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ APE + + +FS+KSD+++FGVL+ EI +
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGET------IAVKRLSK-NSKQGEIEFKNEVLL 293
V N + LG G FG VY+G +S +AVK L + S+Q E++F E L+
Sbjct: 54 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 113
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFD----PINREHMTWEKRYKII 349
+++ H+N+VR +G L+ R ++ E + L F+ + P + +
Sbjct: 114 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 173
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSE---MNPKISDFGMARLFEMDQTHSDTN 406
IA G YL E+ IHRD+ A N LL KI DFGMAR +
Sbjct: 174 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 230
Query: 407 RVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ +M PE M G F+ K+D +SFGVL+ EI S
Sbjct: 231 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 118/229 (51%), Gaps = 11/229 (4%)
Query: 220 EDENVEETIAKSLQFDFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKN 279
ED N +T+ + D + + ++G G FG VYKG + + ++
Sbjct: 13 EDRNRMKTLGRRDSSD--DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAP 70
Query: 280 SKQGEIEFKNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREH 339
+ Q FKNEV +L + +H N++ +G+ + + +V ++ +SL H + +
Sbjct: 71 TPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFE 129
Query: 340 MTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMD 399
M K I A+G+ YLH S IIHRDLK++NI L ++ KI DFG+A +
Sbjct: 130 MI--KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 184
Query: 400 QTHSDTNRVVGTFGYMAPEYV-MHGR--FSVKSDIFSFGVLVLEIVSGQ 445
++ G+ +MAPE + M + +S +SD+++FG+++ E+++GQ
Sbjct: 185 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGET------IAVKRLSK-NSKQGEIEFKNEVLL 293
V N + LG G FG VY+G +S +AVK L + S+Q E++F E L+
Sbjct: 68 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 127
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFD----PINREHMTWEKRYKII 349
+++ H+N+VR +G L+ R ++ E + L F+ + P + +
Sbjct: 128 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 187
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSE---MNPKISDFGMARLFEMDQTHSDTN 406
IA G YL E+ IHRD+ A N LL KI DFGMAR +
Sbjct: 188 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGG 244
Query: 407 RVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ +M PE M G F+ K+D +SFGVL+ EI S
Sbjct: 245 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 115/210 (54%), Gaps = 7/210 (3%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLL 293
+++ + + + +KLG G +G VY+G+ T+AVK L +++ + E EF E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
+ ++H NLV+LLG C ++ EF+ +L ++ + NR+ ++ + I+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQIS 121
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ YL + + IHRDL A N L+ K++DFG++RL D T++
Sbjct: 122 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIK 177
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ APE + + +FS+KSD+++FGVL+ EI +
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 23/280 (8%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLL 293
+++ + + + +KLG G +G VY+G+ T+AVK L +++ + E EF E +
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 66
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
+ ++H NLV+LLG C ++ EF+ +L ++ + NR+ + + I+
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQIS 125
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ YL + + IHRDL A N L+ K++DFG++RL D T++
Sbjct: 126 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIK 181
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTE-EETEDLLTYAWRNWNEGAA 472
+ APE + + +FS+KSD+++FGVL+ EI + G + + +LL +R
Sbjct: 182 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR------- 234
Query: 473 LNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASV 512
+ P E+M+ C Q N S+RP A +
Sbjct: 235 --MERPEGCPEKVYELMRA------CWQWNPSDRPSFAEI 266
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 108/200 (54%), Gaps = 9/200 (4%)
Query: 249 ANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGF 308
++G G FG VYKG + + ++ + Q FKNEV +L + +H N++ +G+
Sbjct: 18 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
+ + +V ++ +SL H + + M K I A+G+ YLH S II
Sbjct: 78 S-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---II 131
Query: 369 HRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYV-MHGR--F 425
HRDLK++NI L ++ KI DFG+A + ++ G+ +MAPE + M + +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 426 SVKSDIFSFGVLVLEIVSGQ 445
S +SD+++FG+++ E+++GQ
Sbjct: 192 SFQSDVYAFGIVLYELMTGQ 211
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 109/197 (55%), Gaps = 11/197 (5%)
Query: 250 NKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGF 308
+KLG G FG VY+G+ T+AVK L +++ + E EF E ++ ++H NLV+LLG
Sbjct: 17 HKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 75
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
C ++ EF+ +L ++ + NR+ ++ + I+ + YL + + I
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKKN---FI 131
Query: 369 HRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPEYVMHGRFS 426
HRDL A N L+ K++DFG++RL D + T F + APE + + +FS
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGD---TXTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 427 VKSDIFSFGVLVLEIVS 443
+KSD+++FGVL+ EI +
Sbjct: 189 IKSDVWAFGVLLWEIAT 205
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 23/280 (8%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLL 293
+++ + + + +KLG G +G VY+G+ T+AVK L +++ + E EF E +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 67
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
+ ++H NLV+LLG C ++ EF+ +L ++ + NR+ + + I+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQIS 126
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ YL + + IHRDL A N L+ K++DFG++RL D T++
Sbjct: 127 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIK 182
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTE-EETEDLLTYAWRNWNEGAA 472
+ APE + + +FS+KSD+++FGVL+ EI + G + + +LL +R
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR------- 235
Query: 473 LNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASV 512
+ P E+M+ C Q N S+RP A +
Sbjct: 236 --MERPEGCPEKVYELMRA------CWQWNPSDRPSFAEI 267
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 114/210 (54%), Gaps = 7/210 (3%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLL 293
+++ + + + +KLG G +G VY+G+ T+AVK L +++ + E EF E +
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 63
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
+ ++H NLV+LLG C ++ EF+ +L ++ + NR+ + + I+
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQIS 122
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ YL + + IHRDL A N L+ K++DFG++RL D T++
Sbjct: 123 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAPAGAKFPIK 178
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ APE + + +FS+KSD+++FGVL+ EI +
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 108/200 (54%), Gaps = 9/200 (4%)
Query: 249 ANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGF 308
++G G FG VYKG + + ++ + Q FKNEV +L + +H N++ +G+
Sbjct: 15 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
+ + +V ++ +SL H + + M K I A+G+ YLH S II
Sbjct: 75 S-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---II 128
Query: 369 HRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYV-MHGR--F 425
HRDLK++NI L ++ KI DFG+A + ++ G+ +MAPE + M + +
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 188
Query: 426 SVKSDIFSFGVLVLEIVSGQ 445
S +SD+++FG+++ E+++GQ
Sbjct: 189 SFQSDVYAFGIVLYELMTGQ 208
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 108/200 (54%), Gaps = 9/200 (4%)
Query: 249 ANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGF 308
++G G FG VYKG + + ++ + Q FKNEV +L + +H N++ +G+
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
+ + +V ++ +SL H + + M K I A+G+ YLH S II
Sbjct: 73 S-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---II 126
Query: 369 HRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYV-MHGR--F 425
HRDLK++NI L ++ KI DFG+A + ++ G+ +MAPE + M + +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 426 SVKSDIFSFGVLVLEIVSGQ 445
S +SD+++FG+++ E+++GQ
Sbjct: 187 SFQSDVYAFGIVLYELMTGQ 206
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 23/280 (8%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLL 293
+++ + + + +KLG G +G VY+G+ T+AVK L +++ + E EF E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
+ ++H NLV+LLG C ++ EF+ +L ++ + NR+ + + I+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQIS 121
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ YL + + IHRDL A N L+ K++DFG++RL D T++
Sbjct: 122 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIK 177
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTE-EETEDLLTYAWRNWNEGAA 472
+ APE + + +FS+KSD+++FGVL+ EI + G + + +LL +R
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR------- 230
Query: 473 LNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASV 512
+ P E+M+ C Q N S+RP A +
Sbjct: 231 --MERPEGCPEKVYELMRA------CWQWNPSDRPSFAEI 262
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 108/200 (54%), Gaps = 9/200 (4%)
Query: 249 ANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGF 308
++G G FG VYKG + + ++ + Q FKNEV +L + +H N++ +G+
Sbjct: 18 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
+ + +V ++ +SL H + + M K I A+G+ YLH S II
Sbjct: 78 S-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---II 131
Query: 369 HRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYV-MHGR--F 425
HRDLK++NI L ++ KI DFG+A + ++ G+ +MAPE + M + +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 426 SVKSDIFSFGVLVLEIVSGQ 445
S +SD+++FG+++ E+++GQ
Sbjct: 192 SFQSDVYAFGIVLYELMTGQ 211
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 23/280 (8%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLL 293
+++ + + + +KLG G +G VY+G+ T+AVK L +++ + E EF E +
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 64
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
+ ++H NLV+LLG C ++ EF+ +L ++ + NR+ + + I+
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQIS 123
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ YL + + IHRDL A N L+ K++DFG++RL D T++
Sbjct: 124 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAPAGAKFPIK 179
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTE-EETEDLLTYAWRNWNEGAA 472
+ APE + + +FS+KSD+++FGVL+ EI + G + + +LL +R
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR------- 232
Query: 473 LNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASV 512
+ P E+M+ C Q N S+RP A +
Sbjct: 233 --MERPEGCPEKVYELMRA------CWQWNPSDRPSFAEI 264
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 114/210 (54%), Gaps = 7/210 (3%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLL 293
+++ + + + +KLG G +G VY+G+ T+AVK L +++ + E EF E +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 67
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
+ ++H NLV+LLG C ++ EF+ +L ++ + NR+ + + I+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQIS 126
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ YL + + IHRDL A N L+ K++DFG++RL D T++
Sbjct: 127 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIK 182
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ APE + + +FS+KSD+++FGVL+ EI +
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 23/280 (8%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLL 293
+++ + + + +KLG G +G VY+G+ T+AVK L +++ + E EF E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
+ ++H NLV+LLG C ++ EF+ +L ++ + NR+ + + I+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQIS 121
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ YL + + IHRDL A N L+ K++DFG++RL D T++
Sbjct: 122 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIK 177
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTE-EETEDLLTYAWRNWNEGAA 472
+ APE + + +FS+KSD+++FGVL+ EI + G + + +LL +R
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR------- 230
Query: 473 LNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASV 512
+ P E+M+ C Q N S+RP A +
Sbjct: 231 --MERPEGCPEKVYELMRA------CWQWNPSDRPSFAEI 262
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 121/221 (54%), Gaps = 27/221 (12%)
Query: 241 VATDNFSDANKLGQGGFGAVYKG-MLSNGETIAVKRLSKNSKQGEIE-------FKNEVL 292
+A + ++G+GGFG V+KG ++ + +A+K L +GE E F+ EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 293 LLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREH-MTWEKRYKIIEG 351
+++ L H N+V+L G L +V EFVP L H + D + H + W + +++
Sbjct: 76 IMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLD 130
Query: 352 IARGLLYLHEDSRLRIIHRDLKASNILLDS--EMNP---KISDFGMARLFEMDQTHSDTN 406
IA G+ Y+ ++ I+HRDL++ NI L S E P K++DFG+++ Q+ +
Sbjct: 131 IALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVS 184
Query: 407 RVVGTFGYMAPEYV--MHGRFSVKSDIFSFGVLVLEIVSGQ 445
++G F +MAPE + ++ K+D +SF +++ I++G+
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 110/236 (46%), Gaps = 37/236 (15%)
Query: 240 RVATDNFSDANKLGQGGFGAVYKGMLSN------GETIAVKRLSKNSKQGEIEFKNEVLL 293
+ N +LG+G FG V+ N +AVK L S +F E L
Sbjct: 9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAEL 68
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREH-------------- 339
L LQH ++V+ G C+E I+V+E++ + L+ F+ R H
Sbjct: 69 LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFL-----RAHGPDAVLMAEGNPPT 123
Query: 340 -MTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEM 398
+T + I + IA G++YL + +HRDL N L+ + KI DFGM+R
Sbjct: 124 ELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR---- 176
Query: 399 DQTHSDTNRVVGT----FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSF 450
D +D RV G +M PE +M+ +F+ +SD++S GV++ EI + K+ +
Sbjct: 177 DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWY 232
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 114/210 (54%), Gaps = 7/210 (3%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLL 293
+++ + + + +KLG G +G VY+G+ T+AVK L +++ + E EF E +
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 64
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
+ ++H NLV+LLG C ++ EF+ +L ++ + NR+ + + I+
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQIS 123
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ YL + + IHRDL A N L+ K++DFG++RL D T++
Sbjct: 124 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIK 179
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ APE + + +FS+KSD+++FGVL+ EI +
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 114/210 (54%), Gaps = 7/210 (3%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLL 293
+++ + + + +KLG G +G VY+G+ T+AVK L +++ + E EF E +
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 64
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
+ ++H NLV+LLG C ++ EF+ +L ++ + NR+ + + I+
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQIS 123
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ YL + + IHRDL A N L+ K++DFG++RL D T++
Sbjct: 124 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIK 179
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ APE + + +FS+KSD+++FGVL+ EI +
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 109/197 (55%), Gaps = 11/197 (5%)
Query: 250 NKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGF 308
+KLG G +G VY+G+ T+AVK L +++ + E EF E ++ ++H NLV+LLG
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 75
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
C ++ EF+ +L ++ + NR+ ++ + I+ + YL + + I
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKKN---FI 131
Query: 369 HRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPEYVMHGRFS 426
HRDL A N L+ K++DFG++RL D + T F + APE + + +FS
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGD---TXTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 427 VKSDIFSFGVLVLEIVS 443
+KSD+++FGVL+ EI +
Sbjct: 189 IKSDVWAFGVLLWEIAT 205
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 114/210 (54%), Gaps = 7/210 (3%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLL 293
+++ + + + +KLG G +G VY+G+ T+AVK L +++ + E EF E +
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 75
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
+ ++H NLV+LLG C ++ EF+ +L ++ + NR+ + + I+
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQIS 134
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ YL + + IHRDL A N L+ K++DFG++RL D T++
Sbjct: 135 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIK 190
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ APE + + +FS+KSD+++FGVL+ EI +
Sbjct: 191 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 31/223 (13%)
Query: 251 KLGQGGFGAVYKGMLSN------GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
+LG+G FG V+ N +AVK L + S+ +F+ E LL LQH+++VR
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREH-----------------MTWEKRYK 347
G C E + ++V+E++ + L+ F+ R H + +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFL-----RSHGPDAKLLAGGEDVAPGPLGLGQLLA 162
Query: 348 IIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR 407
+ +A G++YL + L +HRDL N L+ + KI DFGM+R + R
Sbjct: 163 VASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGR 219
Query: 408 VVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSF 450
+ +M PE +++ +F+ +SD++SFGV++ EI + K+ +
Sbjct: 220 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 262
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 137/282 (48%), Gaps = 27/282 (9%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLL 293
+++ + + + +KLG G +G VY+G+ T+AVK L +++ + E EF E +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 67
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
+ ++H NLV+LLG C ++ EF+ +L ++ + NR+ + + I+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQIS 126
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF- 412
+ YL + + IHRDL A N L+ K++DFG++RL D + T F
Sbjct: 127 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TXTAHAGAKFP 180
Query: 413 -GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTE-EETEDLLTYAWRNWNEG 470
+ APE + + +FS+KSD+++FGVL+ EI + G + + +LL +R
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR----- 235
Query: 471 AALNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASV 512
+ P E+M+ C Q N S+RP A +
Sbjct: 236 ----MERPEGCPEKVYELMRA------CWQWNPSDRPSFAEI 267
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGET------IAVKRLSK-NSKQGEIEFKNEVLL 293
V N + LG G FG VY+G +S +AVK L + S+Q E++F E L+
Sbjct: 28 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 87
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFD----PINREHMTWEKRYKII 349
+++ H+N+VR +G L+ R ++ E + L F+ + P + +
Sbjct: 88 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 147
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSE---MNPKISDFGMARLFEMDQTHSDTN 406
IA G YL E+ IHRD+ A N LL KI DFGMA+ +
Sbjct: 148 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGG 204
Query: 407 RVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ +M PE M G F+ K+D +SFGVL+ EI S
Sbjct: 205 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 31/223 (13%)
Query: 251 KLGQGGFGAVYKGMLSN------GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
+LG+G FG V+ N +AVK L + S+ +F+ E LL LQH+++VR
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREH-----------------MTWEKRYK 347
G C E + ++V+E++ + L+ F+ R H + +
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFL-----RSHGPDAKLLAGGEDVAPGPLGLGQLLA 133
Query: 348 IIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR 407
+ +A G++YL + L +HRDL N L+ + KI DFGM+R + R
Sbjct: 134 VASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGR 190
Query: 408 VVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSF 450
+ +M PE +++ +F+ +SD++SFGV++ EI + K+ +
Sbjct: 191 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 233
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 9/200 (4%)
Query: 249 ANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGF 308
++G G FG VYKG + + ++ + Q FKNEV +L + +H N++ +G+
Sbjct: 29 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
+ + +V ++ +SL H + + M +K I ARG+ YLH S II
Sbjct: 89 S-TKPQLAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAKS---II 142
Query: 369 HRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVM---HGRF 425
HRDLK++NI L + KI DFG+A ++ G+ +MAPE + +
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 426 SVKSDIFSFGVLVLEIVSGQ 445
S +SD+++FG+++ E+++GQ
Sbjct: 203 SFQSDVYAFGIVLYELMTGQ 222
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 137/282 (48%), Gaps = 27/282 (9%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLL 293
+++ + + + +KLG G +G VY+G+ T+AVK L +++ + E EF E +
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 63
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
+ ++H NLV+LLG C ++ EF+ +L ++ + NR+ + + I+
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQIS 122
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF- 412
+ YL + + IHRDL A N L+ K++DFG++RL D + T F
Sbjct: 123 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TXTAHAGAKFP 176
Query: 413 -GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTE-EETEDLLTYAWRNWNEG 470
+ APE + + +FS+KSD+++FGVL+ EI + G + + +LL +R
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR----- 231
Query: 471 AALNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASV 512
+ P E+M+ C Q N S+RP A +
Sbjct: 232 ----MERPEGCPEKVYELMRA------CWQWNPSDRPSFAEI 263
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 138/280 (49%), Gaps = 23/280 (8%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLL 293
+++ + + + +KLG G +G VY+G+ T+AVK L +++ + E EF E +
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 269
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
+ ++H NLV+LLG C ++ EF+ +L ++ + NR+ ++ + I+
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQIS 328
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ YL + + IHR+L A N L+ K++DFG++RL D T++
Sbjct: 329 SAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIK 384
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTE-EETEDLLTYAWRNWNEGAA 472
+ APE + + +FS+KSD+++FGVL+ EI + G + + +LL +R
Sbjct: 385 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR------- 437
Query: 473 LNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASV 512
+ P E+M+ C Q N S+RP A +
Sbjct: 438 --MERPEGCPEKVYELMRA------CWQWNPSDRPSFAEI 469
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 31/223 (13%)
Query: 251 KLGQGGFGAVYKGMLSN------GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
+LG+G FG V+ N +AVK L + S+ +F+ E LL LQH+++VR
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREH-----------------MTWEKRYK 347
G C E + ++V+E++ + L+ F+ R H + +
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFL-----RSHGPDAKLLAGGEDVAPGPLGLGQLLA 139
Query: 348 IIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR 407
+ +A G++YL + L +HRDL N L+ + KI DFGM+R + R
Sbjct: 140 VASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGR 196
Query: 408 VVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSF 450
+ +M PE +++ +F+ +SD++SFGV++ EI + K+ +
Sbjct: 197 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 239
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 117/229 (51%), Gaps = 11/229 (4%)
Query: 220 EDENVEETIAKSLQFDFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKN 279
ED N +T+ + D + + ++G G FG VYKG + + ++
Sbjct: 14 EDRNRMKTLGRRDSSD--DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAP 71
Query: 280 SKQGEIEFKNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREH 339
+ Q FKNEV +L + +H N++ +G+ + + +V ++ +SL H + +
Sbjct: 72 TPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFE 130
Query: 340 MTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMD 399
M K I A+G+ YLH S IIHRDLK++NI L ++ KI DFG+A
Sbjct: 131 MI--KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRW 185
Query: 400 QTHSDTNRVVGTFGYMAPEYV-MHGR--FSVKSDIFSFGVLVLEIVSGQ 445
++ G+ +MAPE + M + +S +SD+++FG+++ E+++GQ
Sbjct: 186 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 133/275 (48%), Gaps = 29/275 (10%)
Query: 252 LGQGGFGAVYKGMLS----NGETIAVKRLSKN-SKQGEIEFKNEVLLLARLQHRNLVRLL 306
+G G FG V +G L +A+K L +++ EF +E ++ + +H N++RL
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
G +++ EF+ N +LD F+ +N T + ++ GIA G+ YL E +
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFL--RLNDGQFTVIQLVGMLRGIASGMRYLAE---MS 138
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVG---TFGYMAPEYVMHG 423
+HRDL A NIL++S + K+SDFG++R E + + +G + APE +
Sbjct: 139 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFR 198
Query: 424 RFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMRGG 483
+F+ SD +S+G+++ E++S +R + + +N ++ R
Sbjct: 199 KFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD---------------VINAIEQDYRLP 243
Query: 484 STSEMMKCIHIGLL-CVQENVSNRPGMASVVNMLN 517
+ +H +L C Q++ + RP VV+ L+
Sbjct: 244 PPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALD 278
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 108/195 (55%), Gaps = 7/195 (3%)
Query: 250 NKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGF 308
+KLG G +G VY+G+ T+AVK L +++ + E EF E ++ ++H NLV+LLG
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 75
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
C ++ EF+ +L ++ + NR+ ++ + I+ + YL + + I
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKKN---FI 131
Query: 369 HRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVK 428
HRDL A N L+ K++DFG++RL D T + + APE + + +FS+K
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGD-TFTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 429 SDIFSFGVLVLEIVS 443
SD+++FGVL+ EI +
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 107/200 (53%), Gaps = 9/200 (4%)
Query: 249 ANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGF 308
++G G FG VYKG + + ++ + Q FKNEV +L + +H N++ +G+
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
+ I V ++ +SL H + + M K I A+G+ YLH S II
Sbjct: 73 STAPQLAI-VTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---II 126
Query: 369 HRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYV-MHGR--F 425
HRDLK++NI L ++ KI DFG+A + ++ G+ +MAPE + M + +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 426 SVKSDIFSFGVLVLEIVSGQ 445
S +SD+++FG+++ E+++GQ
Sbjct: 187 SFQSDVYAFGIVLYELMTGQ 206
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 120/221 (54%), Gaps = 27/221 (12%)
Query: 241 VATDNFSDANKLGQGGFGAVYKG-MLSNGETIAVKRLSKNSKQGEIE-------FKNEVL 292
+A + ++G+GGFG V+KG ++ + +A+K L +GE E F+ EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 293 LLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREH-MTWEKRYKIIEG 351
+++ L H N+V+L G L +V EFVP L H + D + H + W + +++
Sbjct: 76 IMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLD 130
Query: 352 IARGLLYLHEDSRLRIIHRDLKASNILLDS--EMNP---KISDFGMARLFEMDQTHSDTN 406
IA G+ Y+ ++ I+HRDL++ NI L S E P K++DFG ++ Q+ +
Sbjct: 131 IALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVS 184
Query: 407 RVVGTFGYMAPEYV--MHGRFSVKSDIFSFGVLVLEIVSGQ 445
++G F +MAPE + ++ K+D +SF +++ I++G+
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 133/275 (48%), Gaps = 29/275 (10%)
Query: 252 LGQGGFGAVYKGMLS----NGETIAVKRLSKN-SKQGEIEFKNEVLLLARLQHRNLVRLL 306
+G G FG V +G L +A+K L +++ EF +E ++ + +H N++RL
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
G +++ EF+ N +LD F+ +N T + ++ GIA G+ YL E +
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFL--RLNDGQFTVIQLVGMLRGIASGMRYLAE---MS 136
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVG---TFGYMAPEYVMHG 423
+HRDL A NIL++S + K+SDFG++R E + + +G + APE +
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFR 196
Query: 424 RFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMRGG 483
+F+ SD +S+G+++ E++S +R + + +N ++ R
Sbjct: 197 KFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD---------------VINAIEQDYRLP 241
Query: 484 STSEMMKCIHIGLL-CVQENVSNRPGMASVVNMLN 517
+ +H +L C Q++ + RP VV+ L+
Sbjct: 242 PPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALD 276
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 107/200 (53%), Gaps = 9/200 (4%)
Query: 249 ANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGF 308
++G G FG VYKG + + ++ + Q FKNEV +L + +H N++ +G+
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
+ + +V ++ +SL H + + M K I A+G+ YLH S II
Sbjct: 73 S-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---II 126
Query: 369 HRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYV-MHGR--F 425
HRDLK++NI L ++ KI DFG+A ++ G+ +MAPE + M + +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 426 SVKSDIFSFGVLVLEIVSGQ 445
S +SD+++FG+++ E+++GQ
Sbjct: 187 SFQSDVYAFGIVLYELMTGQ 206
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 137/280 (48%), Gaps = 23/280 (8%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLL 293
+++ + + + +KLG G +G VY+G+ T+AVK L +++ + E EF E +
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 308
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
+ ++H NLV+LLG C ++ EF+ +L ++ + NR+ + + I+
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQIS 367
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ YL + + IHR+L A N L+ K++DFG++RL D T++
Sbjct: 368 SAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIK 423
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTE-EETEDLLTYAWRNWNEGAA 472
+ APE + + +FS+KSD+++FGVL+ EI + G + + +LL +R
Sbjct: 424 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR------- 476
Query: 473 LNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASV 512
+ P E+M+ C Q N S+RP A +
Sbjct: 477 --MERPEGCPEKVYELMRA------CWQWNPSDRPSFAEI 508
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 104/200 (52%), Gaps = 9/200 (4%)
Query: 249 ANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGF 308
++G G FG VYKG + + ++ + Q FKNEV +L + +H N++ +G+
Sbjct: 29 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
+ +V ++ +SL H + + M +K I ARG+ YLH S II
Sbjct: 89 STA-PQLAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAKS---II 142
Query: 369 HRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVM---HGRF 425
HRDLK++NI L + KI DFG+A ++ G+ +MAPE + +
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 426 SVKSDIFSFGVLVLEIVSGQ 445
S +SD+++FG+++ E+++GQ
Sbjct: 203 SFQSDVYAFGIVLYELMTGQ 222
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 107/200 (53%), Gaps = 9/200 (4%)
Query: 249 ANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGF 308
++G G FG VYKG + + ++ + Q FKNEV +L + +H N++ +G+
Sbjct: 33 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
+ + +V ++ +SL H + + M K I A+G+ YLH S II
Sbjct: 93 S-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---II 146
Query: 369 HRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYV-MHGR--F 425
HRDLK++NI L ++ KI DFG+A ++ G+ +MAPE + M + +
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 206
Query: 426 SVKSDIFSFGVLVLEIVSGQ 445
S +SD+++FG+++ E+++GQ
Sbjct: 207 SFQSDVYAFGIVLYELMTGQ 226
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 135/275 (49%), Gaps = 29/275 (10%)
Query: 252 LGQGGFGAVYKGMLS-NGET---IAVKRL-SKNSKQGEIEFKNEVLLLARLQHRNLVRLL 306
+G G FG V G L G+ +A+K L S +++ +F +E ++ + H N++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
G + +++ EF+ N SLD F+ N T + ++ GIA G+ YL + +
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQ--NDGQFTVIQLVGMLRGIAAGMKYLAD---MN 129
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVG---TFGYMAPEYVMHG 423
+HR L A NIL++S + K+SDFG++R E D + +G + APE + +
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR 189
Query: 424 RFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMRGG 483
+F+ SD++S+G+++ E++S +R + + +N ++ R
Sbjct: 190 KFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD---------------VINAIEQDYRLP 234
Query: 484 STSEMMKCIHIGLL-CVQENVSNRPGMASVVNMLN 517
+ +H +L C Q++ ++RP +VN L+
Sbjct: 235 PPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 269
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 114/210 (54%), Gaps = 7/210 (3%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLL 293
+++ + + + +KLG G +G VY+G+ T+AVK L +++ + E EF E +
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 266
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
+ ++H NLV+LLG C ++ EF+ +L ++ + NR+ + + I+
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQIS 325
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ YL + + IHR+L A N L+ K++DFG++RL D T++
Sbjct: 326 SAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIK 381
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ APE + + +FS+KSD+++FGVL+ EI +
Sbjct: 382 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 120/221 (54%), Gaps = 27/221 (12%)
Query: 241 VATDNFSDANKLGQGGFGAVYKG-MLSNGETIAVKRLSKNSKQGEIE-------FKNEVL 292
+A + ++G+GGFG V+KG ++ + +A+K L +GE E F+ EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 293 LLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREH-MTWEKRYKIIEG 351
+++ L H N+V+L G L +V EFVP L H + D + H + W + +++
Sbjct: 76 IMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLD 130
Query: 352 IARGLLYLHEDSRLRIIHRDLKASNILLDS--EMNP---KISDFGMARLFEMDQTHSDTN 406
IA G+ Y+ ++ I+HRDL++ NI L S E P K++DF +++ Q+ +
Sbjct: 131 IALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVS 184
Query: 407 RVVGTFGYMAPEYV--MHGRFSVKSDIFSFGVLVLEIVSGQ 445
++G F +MAPE + ++ K+D +SF +++ I++G+
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 117/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F LG G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 80 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 136
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG+A+L E + H++ +V +MA
Sbjct: 137 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMA 191
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 192 LESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 117/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F LG G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 79 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 135
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG+A+L E + H++ +V +MA
Sbjct: 136 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMA 190
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 111/201 (55%), Gaps = 10/201 (4%)
Query: 246 FSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
F KLG+G +G+VYK + G+ +A+K++ S EI E+ ++ + ++V+
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEI--IKEISIMQQCDSPHVVK 88
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
G + + +V E+ S+ I + + +T ++ I++ +GL YLH
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIR--LRNKTLTEDEIATILQSTLKGLEYLH---F 143
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
+R IHRD+KA NILL++E + K++DFG+A ++ + N V+GT +MAPE +
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVAG--QLTDXMAKRNXVIGTPFWMAPEVIQEIG 201
Query: 425 FSVKSDIFSFGVLVLEIVSGQ 445
++ +DI+S G+ +E+ G+
Sbjct: 202 YNCVADIWSLGITAIEMAEGK 222
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 117/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F LG G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 77 NPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 133
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG+A+L E + H++ +V +MA
Sbjct: 134 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMA 188
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 189 LESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 117/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F LG G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 77 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 133
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG+A+L E + H++ +V +MA
Sbjct: 134 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMA 188
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 189 LESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 117/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F LG G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 76 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 132
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG+A+L E + H++ +V +MA
Sbjct: 133 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMA 187
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 117/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F LG G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 134
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG+A+L E + H++ +V +MA
Sbjct: 135 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMA 189
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 117/206 (56%), Gaps = 16/206 (7%)
Query: 246 FSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQH 299
F LG G FG VYKG+ + GE + A+K L + S + E +E ++A + +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 300 RNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYL 359
++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ YL
Sbjct: 83 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYL 139
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMAP 417
ED RL +HRDL A N+L+ + + KI+DFG+A+L E + H++ +V +MA
Sbjct: 140 -EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMAL 194
Query: 418 EYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 195 ESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 119/236 (50%), Gaps = 30/236 (12%)
Query: 213 RVGKLKLEDENVEETIAKSLQFDFETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETI 271
R G LK D +V E K D E + FSD ++G G FGAVY + N E +
Sbjct: 34 RAGSLK--DPDVAELFFKD---DPEKL------FSDLREIGHGSFGAVYFARDVRNSEVV 82
Query: 272 AVKRLSKNSKQGEIEFKN---EVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLD 328
A+K++S + KQ ++++ EV L +L+H N ++ G L LV E+ ++ D
Sbjct: 83 AIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASD 142
Query: 329 HFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKIS 388
++++ + + + G +GL YLH + +IHRD+KA NILL K+
Sbjct: 143 LL---EVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLG 196
Query: 389 DFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVM---HGRFSVKSDIFSFGVLVLEI 441
DFG A + + N VGT +MAPE ++ G++ K D++S G+ +E+
Sbjct: 197 DFGSASIM------APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 117/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F LG G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 132
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG+A+L E + H++ +V +MA
Sbjct: 133 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMA 187
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 117/206 (56%), Gaps = 16/206 (7%)
Query: 246 FSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQH 299
F LG G FG VYKG+ + GE + A+K L + S + E +E ++A + +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 300 RNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYL 359
++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ YL
Sbjct: 102 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYL 158
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMAP 417
ED RL +HRDL A N+L+ + + KI+DFG+A+L E + H++ +V +MA
Sbjct: 159 -EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMAL 213
Query: 418 EYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 214 ESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 117/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F LG G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 78 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 134
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG+A+L E + H++ +V +MA
Sbjct: 135 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMA 189
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 117/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F LG G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 132
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG+A+L E + H++ +V +MA
Sbjct: 133 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMA 187
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 117/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F LG G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 139
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG+A+L E + H++ +V +MA
Sbjct: 140 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMA 194
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 117/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F LG G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 135
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG+A+L E + H++ +V +MA
Sbjct: 136 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMA 190
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 117/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F LG G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 132
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG+A+L E + H++ +V +MA
Sbjct: 133 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMA 187
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 117/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F LG G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 135
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG+A+L E + H++ +V +MA
Sbjct: 136 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMA 190
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 117/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F LG G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 135
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG+A+L E + H++ +V +MA
Sbjct: 136 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMA 190
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 117/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F LG G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 86 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 142
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG+A+L E + H++ +V +MA
Sbjct: 143 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMA 197
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 198 LESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 117/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F LG G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 70 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 126
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG+A+L E + H++ +V +MA
Sbjct: 127 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMA 181
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 182 LESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 106/195 (54%), Gaps = 9/195 (4%)
Query: 250 NKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
KLG G FG V+ + +AVK + S E F E ++ LQH LV+L
Sbjct: 21 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHA-V 78
Query: 310 LERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
+ ++ ++ EF+ SL F+ D +++ + K IA G+ ++ + + I
Sbjct: 79 VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YI 133
Query: 369 HRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVK 428
HRDL+A+NIL+ + + KI+DFG+AR+ E D ++ + APE + G F++K
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAINFGSFTIK 192
Query: 429 SDIFSFGVLVLEIVS 443
SD++SFG+L++EIV+
Sbjct: 193 SDVWSFGILLMEIVT 207
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 246 FSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVLLLARLQHRN 301
FSD ++G G FGAVY + N E +A+K++S + KQ ++++ EV L +L+H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 302 LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHE 361
++ G L LV E+ ++ D ++++ + + + G +GL YLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHS 133
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVM 421
+ +IHRD+KA NILL K+ DFG A + + N VGT +MAPE ++
Sbjct: 134 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVIL 184
Query: 422 ---HGRFSVKSDIFSFGVLVLEI 441
G++ K D++S G+ +E+
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIEL 207
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 112/203 (55%), Gaps = 13/203 (6%)
Query: 246 FSDANKLGQGGFGAVYKGMLSN-GETIAVKRLS-KNSKQGEIEFKNEVLLLARLQHRNLV 303
F+ +++G+G FG VYKG+ ++ E +A+K + + ++ + + E+ +L++ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 304 RLLGFCLERKERILVYEFVPNAS-LDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
R G L+ + ++ E++ S LD P+ ++ I+ I +GL YLH +
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIA-----TILREILKGLDYLHSE 135
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMH 422
R IHRD+KA+N+LL + + K++DFG+A ++ T N VGT +MAPE +
Sbjct: 136 ---RKIHRDIKAANVLLSEQGDVKLADFGVAG--QLTDTQIKRNXFVGTPFWMAPEVIKQ 190
Query: 423 GRFSVKSDIFSFGVLVLEIVSGQ 445
+ K+DI+S G+ +E+ G+
Sbjct: 191 SAYDFKADIWSLGITAIELAKGE 213
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 108/198 (54%), Gaps = 15/198 (7%)
Query: 250 NKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
KLG G FG V+ + +AVK + S E F E ++ LQH LV+L
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKL--HA 250
Query: 310 LERKERI-LVYEFVPNASLDHFIFDPINREHMTWEKRYKIIE---GIARGLLYLHEDSRL 365
+ KE I ++ EF+ SL D + + + + K+I+ IA G+ ++ + +
Sbjct: 251 VVTKEPIYIITEFMAKGSL----LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-- 304
Query: 366 RIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRF 425
IHRDL+A+NIL+ + + KI+DFG+AR+ E D ++ + APE + G F
Sbjct: 305 -YIHRDLRAANILVSASLVCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAINFGSF 362
Query: 426 SVKSDIFSFGVLVLEIVS 443
++KSD++SFG+L++EIV+
Sbjct: 363 TIKSDVWSFGILLMEIVT 380
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 116/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F LG G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 80 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 136
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG A+L E + H++ +V +MA
Sbjct: 137 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--PIKWMA 191
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 192 LESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 116/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F LG G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA G+ Y
Sbjct: 73 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAEGMNY 129
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG+A+L E + H++ +V +MA
Sbjct: 130 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMA 184
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 185 LESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 116/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F LG G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 134
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG A+L E + H++ +V +MA
Sbjct: 135 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--PIKWMA 189
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 138/302 (45%), Gaps = 49/302 (16%)
Query: 241 VATDNFSDANKLGQGGFGAVYKG-----MLSNGET-IAVKRLSKNSKQGE-IEFKNEVLL 293
V+ + + +LGQG FG VY+G + ET +AVK +++++ E IEF NE +
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIF--------DPINREHMTWEKR 345
+ ++VRLLG + + ++V E + + L ++ +P R T ++
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP-GRPPPTLQEM 132
Query: 346 YKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDT 405
++ IA G+ YL+ + +HRDL A N ++ + KI DFGM R D +D
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDX 185
Query: 406 NRVVGT----FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLT 461
R G +MAPE + G F+ SD++SFGV++ EI S ++ G E
Sbjct: 186 XRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE------ 239
Query: 462 YAWRNWNEGAALNLMDPTMRGGSTSEMMKC----IHIGLLCVQENVSNRPGMASVVNMLN 517
++ M GG + C + +C Q N + RP +VN+L
Sbjct: 240 ------------QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
Query: 518 GD 519
D
Sbjct: 288 DD 289
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 30/223 (13%)
Query: 251 KLGQGGFGAVYKGMLSN------GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
+LG+G FG V+ N +AVK L + +F+ E LL LQH ++V+
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 305 LLGFCLERKERILVYEFVPNASLDHF----------IFDPINRE---HMTWEKRYKIIEG 351
G C + I+V+E++ + L+ F + D R+ + + I
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 352 IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT 411
IA G++YL + +HRDL N L+ + + KI DFGM+R D +D RV G
Sbjct: 142 IASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR----DVYSTDYYRVGGH 194
Query: 412 ----FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSF 450
+M PE +M+ +F+ +SD++SFGV++ EI + K+ F
Sbjct: 195 TMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWF 237
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 116/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F LG G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 78 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 134
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG A+L E + H++ +V +MA
Sbjct: 135 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--PIKWMA 189
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 116/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F LG G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 134
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG A+L E + H++ +V +MA
Sbjct: 135 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--PIKWMA 189
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 116/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F LG G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 139
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG A+L E + H++ +V +MA
Sbjct: 140 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--PIKWMA 194
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 116/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F LG G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 132
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG A+L E + H++ +V +MA
Sbjct: 133 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--PIKWMA 187
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 137/302 (45%), Gaps = 49/302 (16%)
Query: 241 VATDNFSDANKLGQGGFGAVYKG-----MLSNGET-IAVKRLSKNSKQGE-IEFKNEVLL 293
V+ + + +LGQG FG VY+G + ET +AVK +++++ E IEF NE +
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIF--------DPINREHMTWEKR 345
+ ++VRLLG + + ++V E + + L ++ +P R T ++
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP-GRPPPTLQEM 132
Query: 346 YKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDT 405
++ IA G+ YL+ + +HRDL A N ++ + KI DFGM R D +D
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDX 185
Query: 406 NRVVGT----FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLT 461
R G +MAPE + G F+ SD++SFGV++ EI S ++ G E
Sbjct: 186 XRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE------ 239
Query: 462 YAWRNWNEGAALNLMDPTMRGGSTSEMMKC----IHIGLLCVQENVSNRPGMASVVNMLN 517
++ M GG + C + +C Q N RP +VN+L
Sbjct: 240 ------------QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
Query: 518 GD 519
D
Sbjct: 288 DD 289
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 137/302 (45%), Gaps = 49/302 (16%)
Query: 241 VATDNFSDANKLGQGGFGAVYKG-----MLSNGET-IAVKRLSKNSKQGE-IEFKNEVLL 293
V+ + + +LGQG FG VY+G + ET +AVK +++++ E IEF NE +
Sbjct: 11 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 70
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIF--------DPINREHMTWEKR 345
+ ++VRLLG + + ++V E + + L ++ +P R T ++
Sbjct: 71 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP-GRPPPTLQEM 129
Query: 346 YKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDT 405
++ IA G+ YL+ + +HRDL A N ++ + KI DFGM R D +D
Sbjct: 130 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDX 182
Query: 406 NRVVGT----FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLT 461
R G +MAPE + G F+ SD++SFGV++ EI S ++ G E
Sbjct: 183 XRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE------ 236
Query: 462 YAWRNWNEGAALNLMDPTMRGGSTSEMMKC----IHIGLLCVQENVSNRPGMASVVNMLN 517
++ M GG + C + +C Q N RP +VN+L
Sbjct: 237 ------------QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
Query: 518 GD 519
D
Sbjct: 285 DD 286
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 139/299 (46%), Gaps = 43/299 (14%)
Query: 241 VATDNFSDANKLGQGGFGAVYKG-----MLSNGET-IAVKRLSKNSKQGE-IEFKNEVLL 293
V+ + + +LGQG FG VY+G + ET +AVK +++++ E IEF NE +
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIF--------DPINREHMTWEKR 345
+ ++VRLLG + + ++V E + + L ++ +P R T ++
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP-GRPPPTLQEM 132
Query: 346 YKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMDQTHSD 404
++ IA G+ YL+ + +HRDL A N ++ + KI DFGM R ++E D +
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY-YRK 188
Query: 405 TNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAW 464
+ + +MAPE + G F+ SD++SFGV++ EI S ++ G E
Sbjct: 189 GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--------- 239
Query: 465 RNWNEGAALNLMDPTMRGGSTSEMMKC----IHIGLLCVQENVSNRPGMASVVNMLNGD 519
++ M GG + C + +C Q N RP +VN+L D
Sbjct: 240 ---------QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 115/241 (47%), Gaps = 33/241 (13%)
Query: 244 DNFSDANKLGQGGFGAVYK----GMLSNG--ETIAVKRLSKN-SKQGEIEFKNEVLLLAR 296
+N +G+G FG V++ G+L +AVK L + S + +F+ E L+A
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 297 LQHRNLVRLLGFCLERKERILVYEFVPNASLDHFI--FDP---INREHMTWEKRYK---- 347
+ N+V+LLG C K L++E++ L+ F+ P + H R +
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 348 ------------IIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR- 394
I +A G+ YL E + +HRDL N L+ M KI+DFG++R
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 395 LFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEE 454
++ D +D N + +M PE + + R++ +SD++++GV++ EI S + +G
Sbjct: 224 IYSADYYKADGNDAI-PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 282
Query: 455 E 455
E
Sbjct: 283 E 283
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 116/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F L G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 83 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 139
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG+A+L E + H++ +V +MA
Sbjct: 140 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMA 194
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 116/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F L G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 139
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG+A+L E + H++ +V +MA
Sbjct: 140 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMA 194
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 116/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F LG G FG VYKG+ + GE + A+ L + S + E +E ++A +
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 110 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 166
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG+A+L E + H++ +V +MA
Sbjct: 167 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMA 221
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 222 LESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 135/298 (45%), Gaps = 41/298 (13%)
Query: 241 VATDNFSDANKLGQGGFGAVYKG-----MLSNGET-IAVKRLSKNSKQGE-IEFKNEVLL 293
V+ + + +LGQG FG VY+G + ET +AVK +++++ E IEF NE +
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIF--------DPINREHMTWEKR 345
+ ++VRLLG + + ++V E + + L ++ +P R T ++
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP-GRPPPTLQEM 132
Query: 346 YKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDT 405
++ IA G+ YL+ + +HRDL A N ++ + KI DFGM R +
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKG 189
Query: 406 NRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWR 465
+ + +MAPE + G F+ SD++SFGV++ EI S ++ G E
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE---------- 239
Query: 466 NWNEGAALNLMDPTMRGGSTSEMMKC----IHIGLLCVQENVSNRPGMASVVNMLNGD 519
++ M GG + C + +C Q N RP +VN+L D
Sbjct: 240 --------QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 116/207 (56%), Gaps = 16/207 (7%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETI----AVKRLSK-NSKQGEIEFKNEVLLLARLQ 298
F L G FG VYKG+ + GE + A+K L + S + E +E ++A +
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ ++ RLLG CL + L+ + +P L ++ + +++++ + IA+G+ Y
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNY 132
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF--EMDQTHSDTNRVVGTFGYMA 416
L ED RL +HRDL A N+L+ + + KI+DFG+A+L E + H++ +V +MA
Sbjct: 133 L-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMA 187
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS 443
E ++H ++ +SD++S+GV V E+++
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 139/299 (46%), Gaps = 43/299 (14%)
Query: 241 VATDNFSDANKLGQGGFGAVYKG-----MLSNGET-IAVKRLSKNSKQGE-IEFKNEVLL 293
V+ + + +LGQG FG VY+G + ET +AVK +++++ E IEF NE +
Sbjct: 13 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 72
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIF--------DPINREHMTWEKR 345
+ ++VRLLG + + ++V E + + L ++ +P R T ++
Sbjct: 73 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP-GRPPPTLQEM 131
Query: 346 YKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMDQTHSD 404
++ IA G+ YL+ + +HRDL A N ++ + KI DFGM R ++E D +
Sbjct: 132 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY-YRK 187
Query: 405 TNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAW 464
+ + +MAPE + G F+ SD++SFGV++ EI S ++ G E
Sbjct: 188 GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--------- 238
Query: 465 RNWNEGAALNLMDPTMRGGSTSEMMKC----IHIGLLCVQENVSNRPGMASVVNMLNGD 519
++ M GG + C + +C Q N RP +VN+L D
Sbjct: 239 ---------QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 288
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 103/194 (53%), Gaps = 7/194 (3%)
Query: 250 NKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
+LG G FG V G +A+K + + S E EF E ++ L H LV+L G C
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 310 LERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIH 369
+++ ++ E++ N L +++ + R ++ ++ + + + YL + +H
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 128
Query: 370 RDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKS 429
RDL A N L++ + K+SDFG++R + +D ++ + + PE +M+ +FS KS
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 430 DIFSFGVLVLEIVS 443
DI++FGVL+ EI S
Sbjct: 188 DIWAFGVLMWEIYS 201
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 252 LGQGGFG-AVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCL 310
LG+G FG A+ GE + +K L + ++ + F EV ++ L+H N+++ +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 311 ERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHR 370
+ K + E++ +L I ++ ++ W +R + IA G+ YLH + IIHR
Sbjct: 78 KDKRLNFITEYIKGGTL-RGIIKSMDSQY-PWSQRVSFAKDIASGMAYLHS---MNIIHR 132
Query: 371 DLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR------------VVGTFGYMAPE 418
DL + N L+ N ++DFG+ARL ++T + R VVG +MAPE
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 419 YVMHGRFSVKSDIFSFGVLVLEIV 442
+ + K D+FSFG+++ EI+
Sbjct: 193 MINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 111/210 (52%), Gaps = 28/210 (13%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCLER 312
+G FG V+K L N E +AVK KQ + + EV L ++H N+++ +G E+
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFPIQDKQS-WQNEYEVYSLPGMKHENILQFIG--AEK 88
Query: 313 K------ERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED---- 362
+ + L+ F SL F+ + ++W + I E +ARGL YLHED
Sbjct: 89 RGTSVDVDLWLITAFHEKGSLSDFLKANV----VSWNELCHIAETMARGLAYLHEDIPGL 144
Query: 363 ---SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
+ I HRD+K+ N+LL + + I+DFG+A FE ++ DT+ VGT YMAPE
Sbjct: 145 KDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE- 203
Query: 420 VMHGRFS------VKSDIFSFGVLVLEIVS 443
V+ G + ++ D+++ G+++ E+ S
Sbjct: 204 VLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 104/196 (53%), Gaps = 11/196 (5%)
Query: 250 NKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
+LG G FG V G +A+K + + S E EF E ++ L H LV+L G C
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 310 LERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIH 369
+++ ++ E++ N L +++ + R ++ ++ + + + YL + +H
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 143
Query: 370 RDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPEYVMHGRFSV 427
RDL A N L++ + K+SDFG++R D+ +T+ V F + PE +M+ +FS
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---ETSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 428 KSDIFSFGVLVLEIVS 443
KSDI++FGVL+ EI S
Sbjct: 201 KSDIWAFGVLMWEIYS 216
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 114/213 (53%), Gaps = 21/213 (9%)
Query: 241 VATDNFSDANKLGQGGFGAVY--KGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLA 295
+ +D + LG+G FG V K ++ G+ AVK +SK K + EV LL
Sbjct: 29 IFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLK 87
Query: 296 RLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPI-NREHMTWEKRYKIIEGIAR 354
+L H N+++L F ++ LV E L FD I +R+ + +II +
Sbjct: 88 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLS 143
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDS---EMNPKISDFGMARLFEMDQTHSDTNRVVGT 411
G+ Y+H++ +I+HRDLK N+LL+S + N +I DFG++ FE + D +GT
Sbjct: 144 GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGT 197
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y+APE V+HG + K D++S GV++ ++SG
Sbjct: 198 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 103/194 (53%), Gaps = 7/194 (3%)
Query: 250 NKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
+LG G FG V G +A+K + + S E EF E ++ L H LV+L G C
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 310 LERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIH 369
+++ ++ E++ N L +++ + R ++ ++ + + + YL + +H
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 143
Query: 370 RDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKS 429
RDL A N L++ + K+SDFG++R + +D ++ + + PE +M+ +FS KS
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 430 DIFSFGVLVLEIVS 443
DI++FGVL+ EI S
Sbjct: 203 DIWAFGVLMWEIYS 216
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 114/213 (53%), Gaps = 21/213 (9%)
Query: 241 VATDNFSDANKLGQGGFGAVY--KGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLA 295
+ +D + LG+G FG V K ++ G+ AVK +SK K + EV LL
Sbjct: 46 IFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLK 104
Query: 296 RLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPI-NREHMTWEKRYKIIEGIAR 354
+L H N+++L F ++ LV E L FD I +R+ + +II +
Sbjct: 105 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLS 160
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDS---EMNPKISDFGMARLFEMDQTHSDTNRVVGT 411
G+ Y+H++ +I+HRDLK N+LL+S + N +I DFG++ FE + D +GT
Sbjct: 161 GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGT 214
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y+APE V+HG + K D++S GV++ ++SG
Sbjct: 215 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 114/213 (53%), Gaps = 21/213 (9%)
Query: 241 VATDNFSDANKLGQGGFGAVY--KGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLA 295
+ +D + LG+G FG V K ++ G+ AVK +SK K + EV LL
Sbjct: 47 IFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLK 105
Query: 296 RLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPI-NREHMTWEKRYKIIEGIAR 354
+L H N+++L F ++ LV E L FD I +R+ + +II +
Sbjct: 106 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLS 161
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDS---EMNPKISDFGMARLFEMDQTHSDTNRVVGT 411
G+ Y+H++ +I+HRDLK N+LL+S + N +I DFG++ FE + D +GT
Sbjct: 162 GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGT 215
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y+APE V+HG + K D++S GV++ ++SG
Sbjct: 216 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 116/205 (56%), Gaps = 23/205 (11%)
Query: 252 LGQGGFGAVYKGML--SNGETI--AVKRLSKNSKQGEI-EFKNEVLLLARLQHRNLVRLL 306
+G+G FG VY G L ++G+ I AVK L++ + GE+ +F E +++ H N++ LL
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 307 GFCLERK-ERILVYEFVPNASLDHFI----FDPINREHMTWEKRYKIIEGIARGLLYLHE 361
G CL + ++V ++ + L +FI +P ++ + + + +A+G+ +L
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKFL-- 208
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF---EMDQTHSDTNRVVGTFGYMAPE 418
+ + +HRDL A N +LD + K++DFG+AR E D H+ T + +MA E
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALE 266
Query: 419 YVMHGRFSVKSDIFSFGVLVLEIVS 443
+ +F+ KSD++SFGVL+ E+++
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 114/213 (53%), Gaps = 21/213 (9%)
Query: 241 VATDNFSDANKLGQGGFGAVY--KGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLA 295
+ +D + LG+G FG V K ++ G+ AVK +SK K + EV LL
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 296 RLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPI-NREHMTWEKRYKIIEGIAR 354
+L H N+++L F ++ LV E L FD I +R+ + +II +
Sbjct: 82 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLS 137
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDS---EMNPKISDFGMARLFEMDQTHSDTNRVVGT 411
G+ Y+H++ +I+HRDLK N+LL+S + N +I DFG++ FE + D +GT
Sbjct: 138 GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGT 191
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y+APE V+HG + K D++S GV++ ++SG
Sbjct: 192 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 103/194 (53%), Gaps = 7/194 (3%)
Query: 250 NKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
+LG G FG V G +A+K + + S E EF E ++ L H LV+L G C
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 310 LERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIH 369
+++ ++ E++ N L +++ + R ++ ++ + + + YL + +H
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 123
Query: 370 RDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKS 429
RDL A N L++ + K+SDFG++R + +D ++ + + PE +M+ +FS KS
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 430 DIFSFGVLVLEIVS 443
DI++FGVL+ EI S
Sbjct: 183 DIWAFGVLMWEIYS 196
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 134/284 (47%), Gaps = 49/284 (17%)
Query: 252 LGQGGFGAVYKGMLS----NGETIAVKRLSKN-SKQGEIEFKNEVLLLARLQHRNLVRLL 306
+G G FG V G L +A+K L +++ +F E ++ + H N+V L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREH---MTWEKRYKIIEGIARGLLYLHEDS 363
G K ++V EF+ N +LD F+ R+H T + ++ GIA G+ YL +
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFL-----RKHDGQFTVIQLVGMLRGIAAGMRYLAD-- 163
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG------YMAP 417
+ +HRDL A NIL++S + K+SDFG++R+ E D V T G + AP
Sbjct: 164 -MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIE-----DDPEAVYTTTGGKIPVRWTAP 217
Query: 418 EYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAALNLMD 477
E + + +F+ SD++S+G+++ E++S Y R + + + +++
Sbjct: 218 EAIQYRKFTSASDVWSYGIVMWEVMS------------------YGERPYWDMSNQDVIK 259
Query: 478 PTMRGGSTSEMMKC---IHIGLL-CVQENVSNRPGMASVVNMLN 517
G M C +H +L C Q+ + RP +V +L+
Sbjct: 260 AIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILD 303
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 103/194 (53%), Gaps = 7/194 (3%)
Query: 250 NKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
+LG G FG V G +A+K + + S E EF E ++ L H LV+L G C
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 310 LERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIH 369
+++ ++ E++ N L +++ + R ++ ++ + + + YL + +H
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 127
Query: 370 RDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKS 429
RDL A N L++ + K+SDFG++R + +D ++ + + PE +M+ +FS KS
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 430 DIFSFGVLVLEIVS 443
DI++FGVL+ EI S
Sbjct: 187 DIWAFGVLMWEIYS 200
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 139/298 (46%), Gaps = 41/298 (13%)
Query: 241 VATDNFSDANKLGQGGFGAVYKG-----MLSNGET-IAVKRLSKNSKQGE-IEFKNEVLL 293
V+ + + +LGQG FG VY+G + ET +AVK +++++ E IEF NE +
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIF-------DPINREHMTWEKRY 346
+ ++VRLLG + + ++V E + + L ++ + R T ++
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMDQTHSDT 405
++ IA G+ YL+ + +HR+L A N ++ + KI DFGM R ++E D +
Sbjct: 134 QMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDY-YRKG 189
Query: 406 NRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWR 465
+ + +MAPE + G F+ SD++SFGV++ EI S ++ G E
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE---------- 239
Query: 466 NWNEGAALNLMDPTMRGGSTSEMMKC----IHIGLLCVQENVSNRPGMASVVNMLNGD 519
++ M GG + C + +C Q N + RP +VN+L D
Sbjct: 240 --------QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 103/194 (53%), Gaps = 7/194 (3%)
Query: 250 NKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
+LG G FG V G +A+K + + S E EF E ++ L H LV+L G C
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 310 LERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIH 369
+++ ++ E++ N L +++ + R ++ ++ + + + YL + +H
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 134
Query: 370 RDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKS 429
RDL A N L++ + K+SDFG++R + +D ++ + + PE +M+ +FS KS
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 430 DIFSFGVLVLEIVS 443
DI++FGVL+ EI S
Sbjct: 194 DIWAFGVLMWEIYS 207
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 113/201 (56%), Gaps = 15/201 (7%)
Query: 252 LGQGGFGAVYKGML--SNGETI--AVKRLSKNSKQGEI-EFKNEVLLLARLQHRNLVRLL 306
+G+G FG VY G L ++G+ I AVK L++ + GE+ +F E +++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 307 GFCLERK-ERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRL 365
G CL + ++V ++ + L +FI + + T + +A+G+ +L +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKFL---ASK 152
Query: 366 RIIHRDLKASNILLDSEMNPKISDFGMARLF---EMDQTHSDTNRVVGTFGYMAPEYVMH 422
+ +HRDL A N +LD + K++DFG+AR E D H+ T + +MA E +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQT 211
Query: 423 GRFSVKSDIFSFGVLVLEIVS 443
+F+ KSD++SFGVL+ E+++
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT 232
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 113/201 (56%), Gaps = 15/201 (7%)
Query: 252 LGQGGFGAVYKGML--SNGETI--AVKRLSKNSKQGEI-EFKNEVLLLARLQHRNLVRLL 306
+G+G FG VY G L ++G+ I AVK L++ + GE+ +F E +++ H N++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 307 GFCLERK-ERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRL 365
G CL + ++V ++ + L +FI + + T + +A+G+ +L +
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKFL---ASK 150
Query: 366 RIIHRDLKASNILLDSEMNPKISDFGMARLF---EMDQTHSDTNRVVGTFGYMAPEYVMH 422
+ +HRDL A N +LD + K++DFG+AR E D H+ T + +MA E +
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQT 209
Query: 423 GRFSVKSDIFSFGVLVLEIVS 443
+F+ KSD++SFGVL+ E+++
Sbjct: 210 QKFTTKSDVWSFGVLLWELMT 230
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 113/201 (56%), Gaps = 15/201 (7%)
Query: 252 LGQGGFGAVYKGML--SNGETI--AVKRLSKNSKQGEI-EFKNEVLLLARLQHRNLVRLL 306
+G+G FG VY G L ++G+ I AVK L++ + GE+ +F E +++ H N++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 307 GFCLERK-ERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRL 365
G CL + ++V ++ + L +FI + + T + +A+G+ +L +
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKFL---ASK 153
Query: 366 RIIHRDLKASNILLDSEMNPKISDFGMARLF---EMDQTHSDTNRVVGTFGYMAPEYVMH 422
+ +HRDL A N +LD + K++DFG+AR E D H+ T + +MA E +
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPV-KWMALESLQT 212
Query: 423 GRFSVKSDIFSFGVLVLEIVS 443
+F+ KSD++SFGVL+ E+++
Sbjct: 213 QKFTTKSDVWSFGVLLWELMT 233
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 140/299 (46%), Gaps = 43/299 (14%)
Query: 241 VATDNFSDANKLGQGGFGAVYKG-----MLSNGET-IAVKRLSKNSKQGE-IEFKNEVLL 293
V+ + + +LGQG FG VY+G + ET +AVK +++++ E IEF NE +
Sbjct: 15 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 74
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIF--------DPINREHMTWEKR 345
+ ++VRLLG + + ++V E + + L ++ +P R T ++
Sbjct: 75 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP-GRPPPTLQEM 133
Query: 346 YKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMDQTHSD 404
++ IA G+ YL+ + +HR+L A N ++ + KI DFGM R ++E D +
Sbjct: 134 IQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDY-YRK 189
Query: 405 TNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAW 464
+ + +MAPE + G F+ SD++SFGV++ EI S ++ G E
Sbjct: 190 GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--------- 240
Query: 465 RNWNEGAALNLMDPTMRGGSTSEMMKC----IHIGLLCVQENVSNRPGMASVVNMLNGD 519
++ M GG + C + +C Q N + RP +VN+L D
Sbjct: 241 ---------QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 290
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 113/201 (56%), Gaps = 15/201 (7%)
Query: 252 LGQGGFGAVYKGML--SNGETI--AVKRLSKNSKQGEI-EFKNEVLLLARLQHRNLVRLL 306
+G+G FG VY G L ++G+ I AVK L++ + GE+ +F E +++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 307 GFCLERK-ERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRL 365
G CL + ++V ++ + L +FI + + T + +A+G+ +L +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKFL---ASK 152
Query: 366 RIIHRDLKASNILLDSEMNPKISDFGMARLF---EMDQTHSDTNRVVGTFGYMAPEYVMH 422
+ +HRDL A N +LD + K++DFG+AR E D H+ T + +MA E +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQT 211
Query: 423 GRFSVKSDIFSFGVLVLEIVS 443
+F+ KSD++SFGVL+ E+++
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 113/201 (56%), Gaps = 15/201 (7%)
Query: 252 LGQGGFGAVYKGML--SNGETI--AVKRLSKNSKQGEI-EFKNEVLLLARLQHRNLVRLL 306
+G+G FG VY G L ++G+ I AVK L++ + GE+ +F E +++ H N++ LL
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 307 GFCLERK-ERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRL 365
G CL + ++V ++ + L +FI + + T + +A+G+ +L +
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKFL---ASK 157
Query: 366 RIIHRDLKASNILLDSEMNPKISDFGMARLF---EMDQTHSDTNRVVGTFGYMAPEYVMH 422
+ +HRDL A N +LD + K++DFG+AR E D H+ T + +MA E +
Sbjct: 158 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQT 216
Query: 423 GRFSVKSDIFSFGVLVLEIVS 443
+F+ KSD++SFGVL+ E+++
Sbjct: 217 QKFTTKSDVWSFGVLLWELMT 237
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 130/284 (45%), Gaps = 47/284 (16%)
Query: 252 LGQGGFGAVYKGML----SNGETIAVKRLSKN-SKQGEIEFKNEVLLLARLQHRNLVRLL 306
+G G G V G L +A+K L +++ +F +E ++ + H N++RL
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREH---MTWEKRYKIIEGIARGLLYLHEDS 363
G + ++V E++ N SLD F+ R H T + ++ G+ G+ YL S
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFL-----RTHDGQFTIMQLVGMLRGVGAGMRYL---S 168
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG-----YMAPE 418
L +HRDL A N+L+DS + K+SDFG++R+ E D + T T G + APE
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTT----TGGKIPIRWTAPE 224
Query: 419 YVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAALNLMDP 478
+ FS SD++SFGV++ E+ L Y R + +++
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEV------------------LAYGERPYWNMTNRDVISS 266
Query: 479 TMRGGSTSEMMKCIH----IGLLCVQENVSNRPGMASVVNMLNG 518
G M C H + L C ++ + RP + +V++L+
Sbjct: 267 VEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 113/201 (56%), Gaps = 15/201 (7%)
Query: 252 LGQGGFGAVYKGML--SNGETI--AVKRLSKNSKQGEI-EFKNEVLLLARLQHRNLVRLL 306
+G+G FG VY G L ++G+ I AVK L++ + GE+ +F E +++ H N++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 307 GFCLERK-ERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRL 365
G CL + ++V ++ + L +FI + + T + +A+G+ +L +
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKFL---ASK 153
Query: 366 RIIHRDLKASNILLDSEMNPKISDFGMARLF---EMDQTHSDTNRVVGTFGYMAPEYVMH 422
+ +HRDL A N +LD + K++DFG+AR E D H+ T + +MA E +
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQT 212
Query: 423 GRFSVKSDIFSFGVLVLEIVS 443
+F+ KSD++SFGVL+ E+++
Sbjct: 213 QKFTTKSDVWSFGVLLWELMT 233
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 103/194 (53%), Gaps = 7/194 (3%)
Query: 250 NKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
+LG G FG V G +A+K + + S E EF E ++ L H LV+L G C
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 310 LERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIH 369
+++ ++ E++ N L +++ + R ++ ++ + + + YL + +H
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 128
Query: 370 RDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKS 429
RDL A N L++ + K+SDFG++R + +D ++ + + PE +M+ +FS KS
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 430 DIFSFGVLVLEIVS 443
DI++FGVL+ EI S
Sbjct: 188 DIWAFGVLMWEIYS 201
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 21/204 (10%)
Query: 252 LGQGGFGAVYKGML--SNGETI--AVKRLSKNSKQGEI-EFKNEVLLLARLQHRNLVRLL 306
+G+G FG VY G L ++G+ I AVK L++ + GE+ +F E +++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 307 GFCLERK-ERILVYEFVPNASLDHFI----FDPINREHMTWEKRYKIIEGIARGLLYLHE 361
G CL + ++V ++ + L +FI +P ++ + + + +A+G+ YL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYL-- 149
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPEY 419
+ + +HRDL A N +LD + K++DFG+AR + +S N+ +MA E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 420 VMHGRFSVKSDIFSFGVLVLEIVS 443
+ +F+ KSD++SFGVL+ E+++
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 21/204 (10%)
Query: 252 LGQGGFGAVYKGML--SNGETI--AVKRLSKNSKQGEI-EFKNEVLLLARLQHRNLVRLL 306
+G+G FG VY G L ++G+ I AVK L++ + GE+ +F E +++ H N++ LL
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 307 GFCLERK-ERILVYEFVPNASLDHFI----FDPINREHMTWEKRYKIIEGIARGLLYLHE 361
G CL + ++V ++ + L +FI +P ++ + + + +A+G+ YL
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYL-- 167
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPEY 419
+ + +HRDL A N +LD + K++DFG+AR + +S N+ +MA E
Sbjct: 168 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 420 VMHGRFSVKSDIFSFGVLVLEIVS 443
+ +F+ KSD++SFGVL+ E+++
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 21/204 (10%)
Query: 252 LGQGGFGAVYKGML--SNGETI--AVKRLSKNSKQGEI-EFKNEVLLLARLQHRNLVRLL 306
+G+G FG VY G L ++G+ I AVK L++ + GE+ +F E +++ H N++ LL
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 307 GFCLERK-ERILVYEFVPNASLDHFI----FDPINREHMTWEKRYKIIEGIARGLLYLHE 361
G CL + ++V ++ + L +FI +P ++ + + + +A+G+ YL
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYL-- 168
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPEY 419
+ + +HRDL A N +LD + K++DFG+AR + +S N+ +MA E
Sbjct: 169 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 420 VMHGRFSVKSDIFSFGVLVLEIVS 443
+ +F+ KSD++SFGVL+ E+++
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 21/204 (10%)
Query: 252 LGQGGFGAVYKGML--SNGETI--AVKRLSKNSKQGEI-EFKNEVLLLARLQHRNLVRLL 306
+G+G FG VY G L ++G+ I AVK L++ + GE+ +F E +++ H N++ LL
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 307 GFCLERK-ERILVYEFVPNASLDHFI----FDPINREHMTWEKRYKIIEGIARGLLYLHE 361
G CL + ++V ++ + L +FI +P ++ + + + +A+G+ YL
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYL-- 144
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPEY 419
+ + +HRDL A N +LD + K++DFG+AR + +S N+ +MA E
Sbjct: 145 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 420 VMHGRFSVKSDIFSFGVLVLEIVS 443
+ +F+ KSD++SFGVL+ E+++
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 21/204 (10%)
Query: 252 LGQGGFGAVYKGML--SNGETI--AVKRLSKNSKQGEI-EFKNEVLLLARLQHRNLVRLL 306
+G+G FG VY G L ++G+ I AVK L++ + GE+ +F E +++ H N++ LL
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 307 GFCLERK-ERILVYEFVPNASLDHFI----FDPINREHMTWEKRYKIIEGIARGLLYLHE 361
G CL + ++V ++ + L +FI +P ++ + + + +A+G+ YL
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYL-- 141
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPEY 419
+ + +HRDL A N +LD + K++DFG+AR + +S N+ +MA E
Sbjct: 142 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 420 VMHGRFSVKSDIFSFGVLVLEIVS 443
+ +F+ KSD++SFGVL+ E+++
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 21/204 (10%)
Query: 252 LGQGGFGAVYKGML--SNGETI--AVKRLSKNSKQGEI-EFKNEVLLLARLQHRNLVRLL 306
+G+G FG VY G L ++G+ I AVK L++ + GE+ +F E +++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 307 GFCLERK-ERILVYEFVPNASLDHFI----FDPINREHMTWEKRYKIIEGIARGLLYLHE 361
G CL + ++V ++ + L +FI +P ++ + + + +A+G+ YL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYL-- 149
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPEY 419
+ + +HRDL A N +LD + K++DFG+AR + +S N+ +MA E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 420 VMHGRFSVKSDIFSFGVLVLEIVS 443
+ +F+ KSD++SFGVL+ E+++
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 21/204 (10%)
Query: 252 LGQGGFGAVYKGML--SNGETI--AVKRLSKNSKQGEI-EFKNEVLLLARLQHRNLVRLL 306
+G+G FG VY G L ++G+ I AVK L++ + GE+ +F E +++ H N++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 307 GFCLERK-ERILVYEFVPNASLDHFI----FDPINREHMTWEKRYKIIEGIARGLLYLHE 361
G CL + ++V ++ + L +FI +P ++ + + + +A+G+ YL
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYL-- 148
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPEY 419
+ + +HRDL A N +LD + K++DFG+AR + +S N+ +MA E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 420 VMHGRFSVKSDIFSFGVLVLEIVS 443
+ +F+ KSD++SFGVL+ E+++
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 21/204 (10%)
Query: 252 LGQGGFGAVYKGML--SNGETI--AVKRLSKNSKQGEI-EFKNEVLLLARLQHRNLVRLL 306
+G+G FG VY G L ++G+ I AVK L++ + GE+ +F E +++ H N++ LL
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 307 GFCLERK-ERILVYEFVPNASLDHFI----FDPINREHMTWEKRYKIIEGIARGLLYLHE 361
G CL + ++V ++ + L +FI +P ++ + + + +A+G+ YL
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYL-- 146
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPEY 419
+ + +HRDL A N +LD + K++DFG+AR + +S N+ +MA E
Sbjct: 147 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 420 VMHGRFSVKSDIFSFGVLVLEIVS 443
+ +F+ KSD++SFGVL+ E+++
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 21/204 (10%)
Query: 252 LGQGGFGAVYKGML--SNGETI--AVKRLSKNSKQGEI-EFKNEVLLLARLQHRNLVRLL 306
+G+G FG VY G L ++G+ I AVK L++ + GE+ +F E +++ H N++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 307 GFCLERK-ERILVYEFVPNASLDHFI----FDPINREHMTWEKRYKIIEGIARGLLYLHE 361
G CL + ++V ++ + L +FI +P ++ + + + +A+G+ YL
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYL-- 147
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPEY 419
+ + +HRDL A N +LD + K++DFG+AR + +S N+ +MA E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 420 VMHGRFSVKSDIFSFGVLVLEIVS 443
+ +F+ KSD++SFGVL+ E+++
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 112/213 (52%), Gaps = 21/213 (9%)
Query: 241 VATDNFSDANKLGQGGFGAVY--KGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLA 295
+ +D + LG+G FG V K ++ G+ AVK +SK K + EV LL
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 296 RLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPI-NREHMTWEKRYKIIEGIAR 354
+L H N+ +L F ++ LV E L FD I +R+ + +II +
Sbjct: 82 QLDHPNIXKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLS 137
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDS---EMNPKISDFGMARLFEMDQTHSDTNRVVGT 411
G+ Y H++ +I+HRDLK N+LL+S + N +I DFG++ FE + D +GT
Sbjct: 138 GITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK---IGT 191
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y+APE V+HG + K D++S GV++ ++SG
Sbjct: 192 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 130/281 (46%), Gaps = 41/281 (14%)
Query: 252 LGQGGFGAVYKGML----SNGETIAVKRLSKN-SKQGEIEFKNEVLLLARLQHRNLVRLL 306
+G G G V G L +A+K L +++ +F +E ++ + H N++RL
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREH---MTWEKRYKIIEGIARGLLYLHEDS 363
G + ++V E++ N SLD F+ R H T + ++ G+ G+ YL S
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFL-----RTHDGQFTIMQLVGMLRGVGAGMRYL---S 168
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFE--MDQTHSDTNRVVGTFGYMAPEYVM 421
L +HRDL A N+L+DS + K+SDFG++R+ E D ++ T + + APE +
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI-PIRWTAPEAIA 227
Query: 422 HGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMR 481
FS SD++SFGV++ E+ L Y R + +++
Sbjct: 228 FRTFSSASDVWSFGVVMWEV------------------LAYGERPYWNMTNRDVISSVEE 269
Query: 482 GGSTSEMMKCIH----IGLLCVQENVSNRPGMASVVNMLNG 518
G M C H + L C ++ + RP + +V++L+
Sbjct: 270 GYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 111/200 (55%), Gaps = 13/200 (6%)
Query: 252 LGQGGFGAVYKGML--SNGETI--AVKRLSKNSKQGEI-EFKNEVLLLARLQHRNLVRLL 306
+G+G FG VY G L ++G+ I AVK L++ + GE+ +F E +++ H N++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 307 GFCLERK-ERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRL 365
G CL + ++V ++ + L +FI + + T + +A+G+ YL +
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKYL---ASK 151
Query: 366 RIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPEYVMHG 423
+ +HRDL A N +LD + K++DFG+AR + S N+ +MA E +
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQ 211
Query: 424 RFSVKSDIFSFGVLVLEIVS 443
+F+ KSD++SFGVL+ E+++
Sbjct: 212 KFTTKSDVWSFGVLLWELMT 231
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 106/201 (52%), Gaps = 10/201 (4%)
Query: 246 FSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
++ K+GQG G VY M ++ G+ +A+++++ + + NE+L++ ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
L L E +V E++ SL D + M + + + L +LH +
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN-- 135
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
++IHRD+K+ NILL + + K++DFG +Q+ T +VGT +MAPE V
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKA 192
Query: 425 FSVKSDIFSFGVLVLEIVSGQ 445
+ K DI+S G++ +E++ G+
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGE 213
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 110/214 (51%), Gaps = 13/214 (6%)
Query: 244 DNFSDANKLGQGGFGAVYKG-MLSNGETIAVKRLSKNS--KQGEIE-FKNEVLLLARLQH 299
++F N LG+G F VY+ + G +A+K + K + K G ++ +NEV + +L+H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 300 RNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYL 359
+++ L + + LV E N ++ ++ + + + E R+ + I G+LYL
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV-KPFSENEARH-FMHQIITGMLYL 128
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H I+HRDL SN+LL MN KI+DFG+A +M H + GT Y++PE
Sbjct: 129 HSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKM--PHEKHYTLCGTPNYISPEI 183
Query: 420 VMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTE 453
++SD++S G + ++ G R F T+
Sbjct: 184 ATRSAHGLESDVWSLGCMFYTLLIG--RPPFDTD 215
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQHRN 301
+ + K+G+G +G VYK S G +A+KR+ +++ I E+ LL L H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 302 LVRLLGFCLERKERILVYEFVPN---ASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+V L+ + LV+EF+ LD N+ + + + + RG+ +
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKDLKKVLDE------NKTGLQDSQIKIYLYQLLRGVAH 134
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPE 418
H+ RI+HRDLK N+L++S+ K++DFG+AR F + S T+ VV T Y AP+
Sbjct: 135 CHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEVV-TLWYRAPD 189
Query: 419 YVM-HGRFSVKSDIFSFGVLVLEIVSGQ 445
+M ++S DI+S G + E+++G+
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 99/203 (48%), Gaps = 25/203 (12%)
Query: 250 NKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
+LG G FG V G +AVK + + S E EF E + +L H LV+ G C
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 310 LERKERILVYEFVPNASLDHFI------FDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
+ +V E++ N L +++ +P M Y + EG+A L H+
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMC----YDVCEGMA--FLESHQ-- 124
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT---FGYMAPEYV 420
IHRDL A N L+D ++ K+SDFGM R DQ S VGT + APE
Sbjct: 125 ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS----VGTKFPVKWSAPEVF 177
Query: 421 MHGRFSVKSDIFSFGVLVLEIVS 443
+ ++S KSD+++FG+L+ E+ S
Sbjct: 178 HYFKYSSKSDVWAFGILMWEVFS 200
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQHRN 301
+ + K+G+G +G VYK S G +A+KR+ +++ I E+ LL L H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 302 LVRLLGFCLERKERILVYEFVPN---ASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+V L+ + LV+EF+ LD N+ + + + + RG+ +
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKDLKKVLDE------NKTGLQDSQIKIYLYQLLRGVAH 134
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPE 418
H+ RI+HRDLK N+L++S+ K++DFG+AR F + S T+ VV T Y AP+
Sbjct: 135 CHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEVV-TLWYRAPD 189
Query: 419 YVM-HGRFSVKSDIFSFGVLVLEIVSGQ 445
+M ++S DI+S G + E+++G+
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 122/229 (53%), Gaps = 29/229 (12%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQHR 300
+NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHF--------IFDPINREHMTWEKRYKIIEGI 352
N+V+LL + LV+EF+ + L F I P+ + ++ +++++G+
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGL 123
Query: 353 ARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF 412
A + H R++HRDLK N+L+++E K++DFG+AR F + + T+ VV T
Sbjct: 124 A----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TL 174
Query: 413 GYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 175 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 221
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 109/210 (51%), Gaps = 27/210 (12%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLL-----G 307
+G FG V+K L N + +AVK KQ + + E+ ++H NL++ + G
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIFPLQDKQS-WQSEREIFSTPGMKHENLLQFIAAEKRG 81
Query: 308 FCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED----- 362
LE E L+ F SL ++ I +TW + + E ++RGL YLHED
Sbjct: 82 SNLE-VELWLITAFHDKGSLTDYLKGNI----ITWNELCHVAETMSRGLSYLHEDVPWCR 136
Query: 363 ---SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
+ I HRD K+ N+LL S++ ++DFG+A FE + DT+ VGT YMAPE
Sbjct: 137 GEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE- 195
Query: 420 VMHGRFS------VKSDIFSFGVLVLEIVS 443
V+ G + ++ D+++ G+++ E+VS
Sbjct: 196 VLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 123/232 (53%), Gaps = 29/232 (12%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARL 297
V +NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHF--------IFDPINREHMTWEKRYKII 349
H N+V+LL + LV+EF+ + L F I P+ + ++ ++++
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-----FQLL 117
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVV 409
+G+A + H R++HRDLK N+L+++E K++DFG+AR F + + T+ VV
Sbjct: 118 QGLA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV 169
Query: 410 GTFGYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
T Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 170 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 218
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 122/229 (53%), Gaps = 29/229 (12%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQHR 300
+NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHF--------IFDPINREHMTWEKRYKIIEGI 352
N+V+LL + LV+EF+ + L F I P+ + ++ +++++G+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGL 116
Query: 353 ARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF 412
A + H R++HRDLK N+L+++E K++DFG+AR F + + T+ VV T
Sbjct: 117 A----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TL 167
Query: 413 GYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 168 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 214
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 106/201 (52%), Gaps = 10/201 (4%)
Query: 246 FSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
++ K+GQG G VY M ++ G+ +A+++++ + + NE+L++ ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
L L E +V E++ SL D + M + + + L +LH +
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN-- 135
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
++IHRD+K+ NILL + + K++DFG +Q S + +VGT +MAPE V
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSEMVGTPYWMAPEVVTRKA 192
Query: 425 FSVKSDIFSFGVLVLEIVSGQ 445
+ K DI+S G++ +E++ G+
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGE 213
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 232 LQFDFETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKNE 290
L++D+E D D LG+G +G VY G LSN IA+K + + + E
Sbjct: 15 LEYDYEY-----DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEE 69
Query: 291 VLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFI---FDPINREHMTWEKRYK 347
+ L L+H+N+V+ LG E + E VP SL + + P+ T K
Sbjct: 70 IALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK 129
Query: 348 IIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTN 406
I GL YLH++ +I+HRD+K N+L+++ KISDFG ++ + + T
Sbjct: 130 ---QILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSK--RLAGINPCTE 181
Query: 407 RVVGTFGYMAPEYVMHG--RFSVKSDIFSFGVLVLEIVSGQ 445
GT YMAPE + G + +DI+S G ++E+ +G+
Sbjct: 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 123/230 (53%), Gaps = 27/230 (11%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQ 298
+ +NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 299 HRNLVRLLGFCLERKERILVYEFVP-------NASLDHFIFDPINREHMTWEKRYKIIEG 351
H N+V+LL + LV+EF+ +AS I P+ + ++ +++++G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 116
Query: 352 IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT 411
+A + H R++HRDLK N+L+++E K++DFG+AR F + + T+ VV T
Sbjct: 117 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-T 167
Query: 412 FGYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 215
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 122/229 (53%), Gaps = 29/229 (12%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQHR 300
+NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHF--------IFDPINREHMTWEKRYKIIEGI 352
N+V+LL + LV+EF+ + L F I P+ + ++ +++++G+
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGL 123
Query: 353 ARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF 412
A + H R++HRDLK N+L+++E K++DFG+AR F + + T+ VV T
Sbjct: 124 A----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TL 174
Query: 413 GYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 175 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 221
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 105/200 (52%), Gaps = 9/200 (4%)
Query: 249 ANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGF 308
+ ++G G FG VYKG + + ++ + + F+NEV +L + +H N++ +G+
Sbjct: 41 STRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
+ + +V ++ +SL + + M + I A+G+ YLH + II
Sbjct: 101 -MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMF--QLIDIARQTAQGMDYLHAKN---II 154
Query: 369 HRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVM---HGRF 425
HRD+K++NI L + KI DFG+A + + G+ +MAPE + + F
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 426 SVKSDIFSFGVLVLEIVSGQ 445
S +SD++S+G+++ E+++G+
Sbjct: 215 SFQSDVYSYGIVLYELMTGE 234
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 112/206 (54%), Gaps = 21/206 (10%)
Query: 250 NKLGQGGFGAV----YKGMLSN-GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
++LG+G FG+V Y + N G +AVK+L + + +F+ E+ +L L +V+
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 305 LLG--FCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
G + R+ LV E++P+ L F+ +R + + I +G+ YL
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--G 132
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG-----YMAP 417
SR R +HRDL A NIL++SE + KI+DFG+A+L +D+ + VV G + AP
Sbjct: 133 SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY----VVREPGQSPIFWYAP 187
Query: 418 EYVMHGRFSVKSDIFSFGVLVLEIVS 443
E + FS +SD++SFGV++ E+ +
Sbjct: 188 ESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 106/201 (52%), Gaps = 10/201 (4%)
Query: 246 FSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
++ K+GQG G VY M ++ G+ +A+++++ + + NE+L++ ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
L L E +V E++ SL D + M + + + L +LH +
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN-- 135
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
++IHRD+K+ NILL + + K++DFG +Q S + +VGT +MAPE V
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSXMVGTPYWMAPEVVTRKA 192
Query: 425 FSVKSDIFSFGVLVLEIVSGQ 445
+ K DI+S G++ +E++ G+
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGE 213
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 122/228 (53%), Gaps = 27/228 (11%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQHR 300
+NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 301 NLVRLLGFCLERKERILVYEFVP-------NASLDHFIFDPINREHMTWEKRYKIIEGIA 353
N+V+LL + LV+EF+ +AS I P+ + ++ +++++G+A
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 117
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ H R++HRDLK N+L+++E K++DFG+AR F + + T+ VV T
Sbjct: 118 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLW 168
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 214
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 122/228 (53%), Gaps = 27/228 (11%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQHR 300
+NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 301 NLVRLLGFCLERKERILVYEFVP-------NASLDHFIFDPINREHMTWEKRYKIIEGIA 353
N+V+LL + LV+EF+ +AS I P+ + ++ +++++G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 116
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ H R++HRDLK N+L+++E K++DFG+AR F + + T+ VV T
Sbjct: 117 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLW 167
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 213
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 122/228 (53%), Gaps = 27/228 (11%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQHR 300
+NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 301 NLVRLLGFCLERKERILVYEFVP-------NASLDHFIFDPINREHMTWEKRYKIIEGIA 353
N+V+LL + LV+EF+ +AS I P+ + ++ +++++G+A
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 117
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ H R++HRDLK N+L+++E K++DFG+AR F + + T+ VV T
Sbjct: 118 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLW 168
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 214
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 122/228 (53%), Gaps = 27/228 (11%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQHR 300
+NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 301 NLVRLLGFCLERKERILVYEFVP-------NASLDHFIFDPINREHMTWEKRYKIIEGIA 353
N+V+LL + LV+EF+ +AS I P+ + ++ +++++G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 116
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ H R++HRDLK N+L+++E K++DFG+AR F + + T+ VV T
Sbjct: 117 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLW 167
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 106/201 (52%), Gaps = 10/201 (4%)
Query: 246 FSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
++ K+GQG G VY M ++ G+ +A+++++ + + NE+L++ ++ N+V
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
L L E +V E++ SL D + M + + + L +LH +
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN-- 136
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
++IHRD+K+ NILL + + K++DFG +Q S + +VGT +MAPE V
Sbjct: 137 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSXMVGTPYWMAPEVVTRKA 193
Query: 425 FSVKSDIFSFGVLVLEIVSGQ 445
+ K DI+S G++ +E++ G+
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGE 214
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 111/206 (53%), Gaps = 21/206 (10%)
Query: 250 NKLGQGGFGAV----YKGMLSN-GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
++LG+G FG+V Y + N G +AVK+L + + +F+ E+ +L L +V+
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 305 LLG--FCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
G + R E LV E++P+ L F+ +R + + I +G+ YL
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQICKGMEYL--G 128
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG-----YMAP 417
SR R +HRDL A NIL++SE + KI+DFG+A+L +D+ VV G + AP
Sbjct: 129 SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXX----VVREPGQSPIFWYAP 183
Query: 418 EYVMHGRFSVKSDIFSFGVLVLEIVS 443
E + FS +SD++SFGV++ E+ +
Sbjct: 184 ESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 112/206 (54%), Gaps = 21/206 (10%)
Query: 250 NKLGQGGFGAV----YKGMLSN-GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
++LG+G FG+V Y + N G +AVK+L + + +F+ E+ +L L +V+
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 305 LLG--FCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
G + R+ LV E++P+ L F+ +R + + I +G+ YL
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--G 144
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG-----YMAP 417
SR R +HRDL A NIL++SE + KI+DFG+A+L +D+ + VV G + AP
Sbjct: 145 SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY----VVREPGQSPIFWYAP 199
Query: 418 EYVMHGRFSVKSDIFSFGVLVLEIVS 443
E + FS +SD++SFGV++ E+ +
Sbjct: 200 ESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 112/206 (54%), Gaps = 21/206 (10%)
Query: 250 NKLGQGGFGAV----YKGMLSN-GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
++LG+G FG+V Y + N G +AVK+L + + +F+ E+ +L L +V+
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 305 LLG--FCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
G + R+ LV E++P+ L F+ +R + + I +G+ YL
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--G 131
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG-----YMAP 417
SR R +HRDL A NIL++SE + KI+DFG+A+L +D+ + VV G + AP
Sbjct: 132 SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY----VVREPGQSPIFWYAP 186
Query: 418 EYVMHGRFSVKSDIFSFGVLVLEIVS 443
E + FS +SD++SFGV++ E+ +
Sbjct: 187 ESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 232 LQFDFETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKNE 290
L++D+E D D LG+G +G VY G LSN IA+K + + + E
Sbjct: 1 LEYDYEY-----DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEE 55
Query: 291 VLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFI---FDPINREHMTWEKRYK 347
+ L L+H+N+V+ LG E + E VP SL + + P+ T K
Sbjct: 56 IALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK 115
Query: 348 IIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTN 406
I GL YLH++ +I+HRD+K N+L+++ KISDFG ++ + + T
Sbjct: 116 ---QILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSK--RLAGINPCTE 167
Query: 407 RVVGTFGYMAPEYVMHG--RFSVKSDIFSFGVLVLEIVSGQ 445
GT YMAPE + G + +DI+S G ++E+ +G+
Sbjct: 168 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 109/218 (50%), Gaps = 38/218 (17%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSK--NSKQGEIEFK---NEVLLLARLQHRNLVRL 305
LG G FG V+KG+ + GE+I + K K G F+ + +L + L H ++VRL
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 306 LGFCLERKERILVYEFVPNASL-DHFIFDPINREH---------MTWEKRYKIIEGIARG 355
LG C + LV +++P SL DH R+H + W + IA+G
Sbjct: 99 LGLCPGSSLQ-LVTQYLPLGSLLDHV------RQHRGALGPQLLLNWGVQ------IAKG 145
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYM 415
+ YL E ++HR+L A N+LL S +++DFG+A L D + +M
Sbjct: 146 MYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM 202
Query: 416 APEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTE 453
A E + G+++ +SD++S+GV V E++ +FG E
Sbjct: 203 ALESIHFGKYTHQSDVWSYGVTVWELM------TFGAE 234
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 115/223 (51%), Gaps = 13/223 (5%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQ 298
+ +NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
H N+V+LL + LV+EF+ D + + K Y + + +GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSY--LFQLLQGLAF 121
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPE 418
H R++HRDLK N+L+++E K++DFG+AR F + + + VV T Y APE
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 176
Query: 419 YVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 217
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 115/223 (51%), Gaps = 13/223 (5%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQ 298
+ +NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
H N+V+LL + LV+EF+ D + + K Y + + +GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSY--LFQLLQGLAF 118
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPE 418
H R++HRDLK N+L+++E K++DFG+AR F + + + VV T Y APE
Sbjct: 119 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 173
Query: 419 YVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 214
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 252 LGQGGFGAVYKGMLSN--GETI--AVKRLSKNSKQGEIE-FKNEVLLLARLQHRNLVRLL 306
LG+G FG VY+G+ +N GE I AVK K+ E F +E +++ L H ++V+L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
G +E + ++ E P L H++ N + Y + I + + YL +
Sbjct: 76 GI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL--QICKAMAYLES---IN 129
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFS 426
+HRD+ NIL+ S K+ DFG++R E D+ + + +M+PE + RF+
Sbjct: 130 CVHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPESINFRRFT 188
Query: 427 VKSDIFSFGVLVLEIVSGQKRSSFGTE 453
SD++ F V + EI+S K+ F E
Sbjct: 189 TASDVWMFAVCMWEILSFGKQPFFWLE 215
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 252 LGQGGFGAVYKGMLSN--GETI--AVKRLSKNSKQGEIE-FKNEVLLLARLQHRNLVRLL 306
LG+G FG VY+G+ +N GE I AVK K+ E F +E +++ L H ++V+L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
G +E + ++ E P L H++ N + Y + I + + YL +
Sbjct: 92 GI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL--QICKAMAYLES---IN 145
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFS 426
+HRD+ NIL+ S K+ DFG++R E D+ + + +M+PE + RF+
Sbjct: 146 CVHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPESINFRRFT 204
Query: 427 VKSDIFSFGVLVLEIVSGQKRSSFGTE 453
SD++ F V + EI+S K+ F E
Sbjct: 205 TASDVWMFAVCMWEILSFGKQPFFWLE 231
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 115/223 (51%), Gaps = 13/223 (5%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQ 298
+ +NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
H N+V+LL + LV+EF+ D + + K Y + + +GL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSY--LFQLLQGLAF 120
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPE 418
H R++HRDLK N+L+++E K++DFG+AR F + + + VV T Y APE
Sbjct: 121 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 175
Query: 419 YVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 216
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 106/201 (52%), Gaps = 10/201 (4%)
Query: 246 FSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
++ K+GQG G VY M ++ G+ +A+++++ + + NE+L++ ++ N+V
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
L L E +V E++ SL D + M + + + L +LH +
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN-- 136
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
++IHR++K+ NILL + + K++DFG +Q+ T +VGT +MAPE V
Sbjct: 137 -QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKA 193
Query: 425 FSVKSDIFSFGVLVLEIVSGQ 445
+ K DI+S G++ +E++ G+
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGE 214
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 109/218 (50%), Gaps = 38/218 (17%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSK--NSKQGEIEFK---NEVLLLARLQHRNLVRL 305
LG G FG V+KG+ + GE+I + K K G F+ + +L + L H ++VRL
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 306 LGFCLERKERILVYEFVPNASL-DHFIFDPINREH---------MTWEKRYKIIEGIARG 355
LG C + LV +++P SL DH R+H + W + IA+G
Sbjct: 81 LGLCPGSSLQ-LVTQYLPLGSLLDHV------RQHRGALGPQLLLNWGVQ------IAKG 127
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYM 415
+ YL E ++HR+L A N+LL S +++DFG+A L D + +M
Sbjct: 128 MYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM 184
Query: 416 APEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTE 453
A E + G+++ +SD++S+GV V E++ +FG E
Sbjct: 185 ALESIHFGKYTHQSDVWSYGVTVWELM------TFGAE 216
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 138/296 (46%), Gaps = 47/296 (15%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSN-----GET-IAVKRLSKNSKQGE-IEFKNEVLL 293
VA + + + +LGQG FG VY+G+ ET +A+K +++ + E IEF NE +
Sbjct: 7 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 66
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHM---------TWEK 344
+ ++VRLLG + + +++ E + L ++ R M + K
Sbjct: 67 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL--RPEMENNPVLAPPSLSK 124
Query: 345 RYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD 404
++ IA G+ YL+ + + +HRDL A N ++ + KI DFGM R D +D
Sbjct: 125 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXETD 177
Query: 405 TNRVVGT----FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
R G +M+PE + G F+ SD++SFGV++ EI + ++ G E +L
Sbjct: 178 XXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVL 235
Query: 461 TYAWRNWNEGAALNLMD--PTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVN 514
+ EG L+ D P M E+M+ +C Q N RP +++
Sbjct: 236 RFV----MEGGLLDKPDNCPDM----LLELMR------MCWQYNPKMRPSFLEIIS 277
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 108/203 (53%), Gaps = 13/203 (6%)
Query: 246 FSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLS-KNSKQGEIEFKNEVLLLARLQHRNLV 303
F+ K+G+G FG V+KG+ + + +A+K + + ++ + + E+ +L++ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 304 RLLGFCLERKERILVYEFVPNAS-LDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
+ G L+ + ++ E++ S LD P++ + I+ I +GL YLH +
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLHSE 138
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMH 422
+ IHRD+KA+N+LL K++DFG+A ++ T N VGT +MAPE +
Sbjct: 139 KK---IHRDIKAANVLLSEHGEVKLADFGVAG--QLTDTQIKRNXFVGTPFWMAPEVIKQ 193
Query: 423 GRFSVKSDIFSFGVLVLEIVSGQ 445
+ K+DI+S G+ +E+ G+
Sbjct: 194 SAYDSKADIWSLGITAIELARGE 216
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 252 LGQGGFGAVYKGMLSN--GETI--AVKRLSKNSKQGEIE-FKNEVLLLARLQHRNLVRLL 306
LG+G FG VY+G+ +N GE I AVK K+ E F +E +++ L H ++V+L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
G +E + ++ E P L H++ N + Y + I + + YL +
Sbjct: 80 GI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL--QICKAMAYLES---IN 133
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFS 426
+HRD+ NIL+ S K+ DFG++R E D+ + + +M+PE + RF+
Sbjct: 134 CVHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPESINFRRFT 192
Query: 427 VKSDIFSFGVLVLEIVSGQKRSSFGTE 453
SD++ F V + EI+S K+ F E
Sbjct: 193 TASDVWMFAVCMWEILSFGKQPFFWLE 219
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 108/203 (53%), Gaps = 13/203 (6%)
Query: 246 FSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLS-KNSKQGEIEFKNEVLLLARLQHRNLV 303
F+ K+G+G FG V+KG+ + + +A+K + + ++ + + E+ +L++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 304 RLLGFCLERKERILVYEFVPNAS-LDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
+ G L+ + ++ E++ S LD P++ + I+ I +GL YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLHSE 123
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMH 422
+ IHRD+KA+N+LL K++DFG+A ++ T N VGT +MAPE +
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVAG--QLTDTQIKRNTFVGTPFWMAPEVIKQ 178
Query: 423 GRFSVKSDIFSFGVLVLEIVSGQ 445
+ K+DI+S G+ +E+ G+
Sbjct: 179 SAYDSKADIWSLGITAIELARGE 201
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 108/203 (53%), Gaps = 13/203 (6%)
Query: 246 FSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLS-KNSKQGEIEFKNEVLLLARLQHRNLV 303
F+ K+G+G FG V+KG+ + + +A+K + + ++ + + E+ +L++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 304 RLLGFCLERKERILVYEFVPNAS-LDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
+ G L+ + ++ E++ S LD P++ + I+ I +GL YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLHSE 123
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMH 422
+ IHRD+KA+N+LL K++DFG+A ++ T N VGT +MAPE +
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVAG--QLTDTQIKRNXFVGTPFWMAPEVIKQ 178
Query: 423 GRFSVKSDIFSFGVLVLEIVSGQ 445
+ K+DI+S G+ +E+ G+
Sbjct: 179 SAYDSKADIWSLGITAIELARGE 201
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 117/232 (50%), Gaps = 26/232 (11%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQH 299
++ F KLG G + VYKG+ + G +A+K + +S++G E+ L+ L+H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 300 RNLVRLLGFCLERKERILVYEFVPN---ASLDHFIFDPINR-------EHMTWEKRYKII 349
N+VRL + LV+EF+ N +D R ++ W+
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ------ 116
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVV 409
+ +GL + HE+ +I+HRDLK N+L++ K+ DFG+AR F + ++ ++ VV
Sbjct: 117 --LLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP-VNTFSSEVV 170
Query: 410 GTFGYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
T Y AP+ +M R +S DI+S G ++ E+++G+ +EE L+
Sbjct: 171 -TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 110/203 (54%), Gaps = 13/203 (6%)
Query: 246 FSDANKLGQGGFGAVYKGMLS-NGETIAVKRLS-KNSKQGEIEFKNEVLLLARLQHRNLV 303
F+ ++G+G FG V+KG+ + + +A+K + + ++ + + E+ +L++ +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 304 RLLGFCLERKERILVYEFVPNAS-LDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
+ G L+ + ++ E++ S LD P + + +++ I +GL YLH +
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIA-----TMLKEILKGLDYLHSE 139
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMH 422
+ IHRD+KA+N+LL + + K++DFG+A ++ T N VGT +MAPE +
Sbjct: 140 KK---IHRDIKAANVLLSEQGDVKLADFGVAG--QLTDTQIKRNTFVGTPFWMAPEVIQQ 194
Query: 423 GRFSVKSDIFSFGVLVLEIVSGQ 445
+ K+DI+S G+ +E+ G+
Sbjct: 195 SAYDSKADIWSLGITAIELAKGE 217
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 140/293 (47%), Gaps = 41/293 (13%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLS-----NGET-IAVKRLSKNSKQGE-IEFKNEVLL 293
VA + + + +LGQG FG VY+G+ ET +A+K +++ + E IEF NE +
Sbjct: 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 81
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHM---------TWEK 344
+ ++VRLLG + + +++ E + L ++ R M + K
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS--LRPEMENNPVLAPPSLSK 139
Query: 345 RYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMDQTHS 403
++ IA G+ YL+ + + +HRDL A N ++ + KI DFGM R ++E D +
Sbjct: 140 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-YYR 195
Query: 404 DTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYA 463
+ + +M+PE + G F+ SD++SFGV++ EI + ++ G E +L +
Sbjct: 196 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFV 253
Query: 464 WRNWNEGAALNLMD--PTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVN 514
EG L+ D P M E+M+ +C Q N RP +++
Sbjct: 254 ----MEGGLLDKPDNCPDM----LFELMR------MCWQYNPKMRPSFLEIIS 292
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 122/228 (53%), Gaps = 27/228 (11%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQHR 300
+NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 301 NLVRLLGFCLERKERILVYEFVP-------NASLDHFIFDPINREHMTWEKRYKIIEGIA 353
N+V+LL + LV+EF+ +AS I P+ + ++ +++++G++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLS 117
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ H R++HRDLK N+L+++E K++DFG+AR F + + T+ VV T
Sbjct: 118 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLW 168
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 214
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 122/230 (53%), Gaps = 27/230 (11%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQ 298
+ +NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 299 HRNLVRLLGFCLERKERILVYEFVP-------NASLDHFIFDPINREHMTWEKRYKIIEG 351
H N+V+LL + LV+EF+ +AS I P+ + ++ +++++G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 118
Query: 352 IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT 411
+A + H R++HRDLK N+L+++E K++DFG+AR F + + + VV T
Sbjct: 119 LA----FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-T 169
Query: 412 FGYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 217
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 15/211 (7%)
Query: 244 DNFSDAN-KLGQGGFGAVYKG---MLSNGETIAVKRLSKNSKQGEIE-FKNEVLLLARLQ 298
DN A+ +LG G FG+V +G M +A+K L + +++ + E E ++ +L
Sbjct: 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD 68
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ +VRL+G C + + +LV E L F+ RE + +++ ++ G+ Y
Sbjct: 69 NPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKY 125
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMA 416
L E + +HRDL A N+LL + KISDFG+++ D ++ T R G + + A
Sbjct: 126 LEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYY-TARSAGKWPLKWYA 181
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS-GQK 446
PE + +FS +SD++S+GV + E +S GQK
Sbjct: 182 PECINFRKFSSRSDVWSYGVTMWEALSYGQK 212
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 29/200 (14%)
Query: 250 NKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
KLG G FG V+ + +AVK + S E F E ++ LQH LV+L
Sbjct: 188 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHA-V 245
Query: 310 LERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIE---GIARGLLYLHEDSRLR 366
+ ++ ++ EF+ SL D + + + + K+I+ IA G+ ++ + +
Sbjct: 246 VTKEPIYIITEFMAKGSL----LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--- 298
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT---FGYMAPEYVMHG 423
IHRDL+A+NIL+ + + KI+DFG+AR VG + APE + G
Sbjct: 299 YIHRDLRAANILVSASLVCKIADFGLAR--------------VGAKFPIKWTAPEAINFG 344
Query: 424 RFSVKSDIFSFGVLVLEIVS 443
F++KSD++SFG+L++EIV+
Sbjct: 345 SFTIKSDVWSFGILLMEIVT 364
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 138/296 (46%), Gaps = 47/296 (15%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSN-----GET-IAVKRLSKNSKQGE-IEFKNEVLL 293
VA + + + +LGQG FG VY+G+ ET +A+K +++ + E IEF NE +
Sbjct: 16 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 75
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHM---------TWEK 344
+ ++VRLLG + + +++ E + L ++ R M + K
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL--RPEMENNPVLAPPSLSK 133
Query: 345 RYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD 404
++ IA G+ YL+ + + +HRDL A N ++ + KI DFGM R D +D
Sbjct: 134 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXETD 186
Query: 405 TNRVVGT----FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
R G +M+PE + G F+ SD++SFGV++ EI + ++ G E +L
Sbjct: 187 XXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVL 244
Query: 461 TYAWRNWNEGAALNLMD--PTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVN 514
+ EG L+ D P M E+M+ +C Q N RP +++
Sbjct: 245 RFV----MEGGLLDKPDNCPDM----LFELMR------MCWQYNPKMRPSFLEIIS 286
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 108/203 (53%), Gaps = 13/203 (6%)
Query: 246 FSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLS-KNSKQGEIEFKNEVLLLARLQHRNLV 303
F+ K+G+G FG V+KG+ + + +A+K + + ++ + + E+ +L++ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 304 RLLGFCLERKERILVYEFVPNAS-LDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
+ G L+ + ++ E++ S LD P++ + I+ I +GL YLH +
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLHSE 143
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMH 422
+ IHRD+KA+N+LL K++DFG+A ++ T N VGT +MAPE +
Sbjct: 144 KK---IHRDIKAANVLLSEHGEVKLADFGVAG--QLTDTQIKRNTFVGTPFWMAPEVIKQ 198
Query: 423 GRFSVKSDIFSFGVLVLEIVSGQ 445
+ K+DI+S G+ +E+ G+
Sbjct: 199 SAYDSKADIWSLGITAIELARGE 221
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 113/211 (53%), Gaps = 15/211 (7%)
Query: 244 DNFSDAN-KLGQGGFGAVYKG---MLSNGETIAVKRLSKNSKQGEIE-FKNEVLLLARLQ 298
DN A+ +LG G FG+V +G M +A+K L + +++ + E E ++ +L
Sbjct: 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD 394
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+ +VRL+G C + + +LV E L F+ RE + +++ ++ G+ Y
Sbjct: 395 NPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKY 451
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMA 416
L E + +HR+L A N+LL + KISDFG+++ D ++ T R G + + A
Sbjct: 452 LEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYY-TARSAGKWPLKWYA 507
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVS-GQK 446
PE + +FS +SD++S+GV + E +S GQK
Sbjct: 508 PECINFRKFSSRSDVWSYGVTMWEALSYGQK 538
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 141/291 (48%), Gaps = 37/291 (12%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLS-----NGET-IAVKRLSKNSKQGE-IEFKNEVLL 293
VA + + + +LGQG FG VY+G+ ET +A+K +++ + E IEF NE +
Sbjct: 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 81
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFI--FDPI--NREHMTWEKRYKII 349
+ ++VRLLG + + +++ E + L ++ P N + K+I
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 141
Query: 350 E---GIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMDQTHSDT 405
+ IA G+ YL+ + + +HRDL A N ++ + KI DFGM R ++E D +
Sbjct: 142 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-YYRKG 197
Query: 406 NRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWR 465
+ + +M+PE + G F+ SD++SFGV++ EI + ++ G E +L +
Sbjct: 198 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFV-- 253
Query: 466 NWNEGAALNLMD--PTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVN 514
EG L+ D P M E+M+ +C Q N RP +++
Sbjct: 254 --MEGGLLDKPDNCPDM----LFELMR------MCWQYNPKMRPSFLEIIS 292
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 122/230 (53%), Gaps = 27/230 (11%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQ 298
+ +NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 299 HRNLVRLLGFCLERKERILVYEFVP-------NASLDHFIFDPINREHMTWEKRYKIIEG 351
H N+V+LL + LV+EF+ +AS I P+ + ++ +++++G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYL-----FQLLQG 118
Query: 352 IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT 411
+A + H R++HRDLK N+L+++E K++DFG+AR F + + + VV T
Sbjct: 119 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-T 169
Query: 412 FGYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 217
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 122/230 (53%), Gaps = 27/230 (11%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQ 298
+ +NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 299 HRNLVRLLGFCLERKERILVYEFVP-------NASLDHFIFDPINREHMTWEKRYKIIEG 351
H N+V+LL + LV+EF+ +AS I P+ + ++ +++++G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 118
Query: 352 IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT 411
+A + H R++HRDLK N+L+++E K++DFG+AR F + + + VV T
Sbjct: 119 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-T 169
Query: 412 FGYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 217
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 122/231 (52%), Gaps = 29/231 (12%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQ 298
+ +NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHF--------IFDPINREHMTWEKRYKIIE 350
H N+V+LL + LV+EF+ + L F I P+ + ++ +++++
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-----FQLLQ 117
Query: 351 GIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVG 410
G+A + H R++HRDLK N+L+++E K++DFG+AR F + + + VV
Sbjct: 118 GLA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV- 168
Query: 411 TFGYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
T Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 217
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 122/231 (52%), Gaps = 29/231 (12%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQ 298
+ +NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHF--------IFDPINREHMTWEKRYKIIE 350
H N+V+LL + LV+EF+ + L F I P+ + ++ +++++
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-----FQLLQ 116
Query: 351 GIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVG 410
G+A + H R++HRDLK N+L+++E K++DFG+AR F + + + VV
Sbjct: 117 GLA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV- 167
Query: 411 TFGYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
T Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 216
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 122/230 (53%), Gaps = 27/230 (11%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQ 298
+ +NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 299 HRNLVRLLGFCLERKERILVYEFVP-------NASLDHFIFDPINREHMTWEKRYKIIEG 351
H N+V+LL + LV+EF+ +AS I P+ + ++ +++++G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 116
Query: 352 IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT 411
+A + H R++HRDLK N+L+++E K++DFG+AR F + + + VV T
Sbjct: 117 LA----FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-T 167
Query: 412 FGYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 215
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 122/231 (52%), Gaps = 29/231 (12%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQ 298
+ +NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHF--------IFDPINREHMTWEKRYKIIE 350
H N+V+LL + LV+EF+ + L F I P+ + ++ +++++
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-----FQLLQ 116
Query: 351 GIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVG 410
G+A + H R++HRDLK N+L+++E K++DFG+AR F + + + VV
Sbjct: 117 GLA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV- 167
Query: 411 TFGYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
T Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 216
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 121/228 (53%), Gaps = 27/228 (11%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQHR 300
+NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 301 NLVRLLGFCLERKERILVYEFVP-------NASLDHFIFDPINREHMTWEKRYKIIEGIA 353
N+V+LL + LV+E V +AS I P+ + ++ +++++G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYL-----FQLLQGLA 116
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ H R++HRDLK N+L+++E K++DFG+AR F + + T+ VV T
Sbjct: 117 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLW 167
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 213
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 122/230 (53%), Gaps = 27/230 (11%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQ 298
+ +NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 299 HRNLVRLLGFCLERKERILVYEFVP-------NASLDHFIFDPINREHMTWEKRYKIIEG 351
H N+V+LL + LV+EF+ +AS I P+ + ++ +++++G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 115
Query: 352 IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT 411
+A + H R++HRDLK N+L+++E K++DFG+AR F + + + VV T
Sbjct: 116 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-T 166
Query: 412 FGYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 214
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 122/230 (53%), Gaps = 27/230 (11%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQ 298
+ +NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 299 HRNLVRLLGFCLERKERILVYEFVP-------NASLDHFIFDPINREHMTWEKRYKIIEG 351
H N+V+LL + LV+EF+ +AS I P+ + ++ +++++G
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 119
Query: 352 IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT 411
+A + H R++HRDLK N+L+++E K++DFG+AR F + + + VV T
Sbjct: 120 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-T 170
Query: 412 FGYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 218
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 13/218 (5%)
Query: 229 AKSLQFDFETIRVATDNFSDANKLGQGGFGAV-YKGMLSNGETIAVKRLSKNSKQGEIEF 287
A L D R DNF K+G+G G V + S+G+ +AVK++ +Q
Sbjct: 139 ALQLVVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL 195
Query: 288 KNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYK 347
NEV+++ QH N+V + L E +V EF+ +L D + M E+
Sbjct: 196 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAA 251
Query: 348 IIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR 407
+ + + L LH +IHRD+K+ +ILL + K+SDFG ++ +
Sbjct: 252 VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKX 306
Query: 408 VVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
+VGT +MAPE + + + DI+S G++V+E+V G+
Sbjct: 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 344
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 140/293 (47%), Gaps = 41/293 (13%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLS-----NGET-IAVKRLSKNSKQGE-IEFKNEVLL 293
VA + + + +LGQG FG VY+G+ ET +A+K +++ + E IEF NE +
Sbjct: 13 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 72
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHM---------TWEK 344
+ ++VRLLG + + +++ E + L ++ R M + K
Sbjct: 73 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL--RPEMENNPVLAPPSLSK 130
Query: 345 RYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMDQTHS 403
++ IA G+ YL+ + + +HRDL A N ++ + KI DFGM R ++E D +
Sbjct: 131 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-YYR 186
Query: 404 DTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYA 463
+ + +M+PE + G F+ SD++SFGV++ EI + ++ G E +L +
Sbjct: 187 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFV 244
Query: 464 WRNWNEGAALNLMD--PTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVN 514
EG L+ D P M E+M+ +C Q N RP +++
Sbjct: 245 ----MEGGLLDKPDNCPDM----LFELMR------MCWQYNPKMRPSFLEIIS 283
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 140/293 (47%), Gaps = 41/293 (13%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSN-----GET-IAVKRLSKNSKQGE-IEFKNEVLL 293
VA + + + +LGQG FG VY+G+ ET +A+K +++ + E IEF NE +
Sbjct: 9 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHM---------TWEK 344
+ ++VRLLG + + +++ E + L ++ R M + K
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL--RPEMENNPVLAPPSLSK 126
Query: 345 RYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMDQTHS 403
++ IA G+ YL+ + + +HRDL A N ++ + KI DFGM R ++E D +
Sbjct: 127 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-YYR 182
Query: 404 DTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYA 463
+ + +M+PE + G F+ SD++SFGV++ EI + ++ G E +L +
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFV 240
Query: 464 WRNWNEGAALNLMD--PTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVN 514
EG L+ D P M E+M+ +C Q N RP +++
Sbjct: 241 ----MEGGLLDKPDNCPDM----LFELMR------MCWQYNPKMRPSFLEIIS 279
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 122/230 (53%), Gaps = 27/230 (11%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQ 298
+ +NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 299 HRNLVRLLGFCLERKERILVYEFVP-------NASLDHFIFDPINREHMTWEKRYKIIEG 351
H N+V+LL + LV+EF+ +AS I P+ + ++ +++++G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 116
Query: 352 IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT 411
+A + H R++HRDLK N+L+++E K++DFG+AR F + + + VV T
Sbjct: 117 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-T 167
Query: 412 FGYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 215
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 140/293 (47%), Gaps = 41/293 (13%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLS-----NGET-IAVKRLSKNSKQGE-IEFKNEVLL 293
VA + + + +LGQG FG VY+G+ ET +A+K +++ + E IEF NE +
Sbjct: 15 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHM---------TWEK 344
+ ++VRLLG + + +++ E + L ++ R M + K
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL--RPEMENNPVLAPPSLSK 132
Query: 345 RYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMDQTHS 403
++ IA G+ YL+ + + +HRDL A N ++ + KI DFGM R ++E D +
Sbjct: 133 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-YYR 188
Query: 404 DTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYA 463
+ + +M+PE + G F+ SD++SFGV++ EI + ++ G E +L +
Sbjct: 189 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFV 246
Query: 464 WRNWNEGAALNLMD--PTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVN 514
EG L+ D P M E+M+ +C Q N RP +++
Sbjct: 247 ----MEGGLLDKPDNCPDM----LFELMR------MCWQYNPKMRPSFLEIIS 285
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 122/230 (53%), Gaps = 27/230 (11%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQ 298
+ +NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 299 HRNLVRLLGFCLERKERILVYEFVP-------NASLDHFIFDPINREHMTWEKRYKIIEG 351
H N+V+LL + LV+EF+ +AS I P+ + ++ +++++G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 115
Query: 352 IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT 411
+A + H R++HRDLK N+L+++E K++DFG+AR F + + + VV T
Sbjct: 116 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-T 166
Query: 412 FGYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 214
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 122/230 (53%), Gaps = 27/230 (11%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQ 298
+ +NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 299 HRNLVRLLGFCLERKERILVYEFVP-------NASLDHFIFDPINREHMTWEKRYKIIEG 351
H N+V+LL + LV+EF+ +AS I P+ + ++ +++++G
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 117
Query: 352 IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT 411
+A + H R++HRDLK N+L+++E K++DFG+AR F + + + VV T
Sbjct: 118 LA----FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-T 168
Query: 412 FGYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 216
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 140/293 (47%), Gaps = 41/293 (13%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLS-----NGET-IAVKRLSKNSKQGE-IEFKNEVLL 293
VA + + + +LGQG FG VY+G+ ET +A+K +++ + E IEF NE +
Sbjct: 15 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHM---------TWEK 344
+ ++VRLLG + + +++ E + L ++ R M + K
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL--RPEMENNPVLAPPSLSK 132
Query: 345 RYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMDQTHS 403
++ IA G+ YL+ + + +HRDL A N ++ + KI DFGM R ++E D +
Sbjct: 133 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-YYR 188
Query: 404 DTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYA 463
+ + +M+PE + G F+ SD++SFGV++ EI + ++ G E +L +
Sbjct: 189 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFV 246
Query: 464 WRNWNEGAALNLMD--PTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVN 514
EG L+ D P M E+M+ +C Q N RP +++
Sbjct: 247 ----MEGGLLDKPDNCPDM----LFELMR------MCWQYNPKMRPSFLEIIS 285
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 9/198 (4%)
Query: 249 ANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIE--FKNEVLLLARLQHRNLVRLL 306
++G+G FG V+ G L T+ + + + +++ F E +L + H N+VRL+
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
G C +++ +V E V D F + + +++ A G+ YL
Sbjct: 179 GVCTQKQPIYIVMELVQGG--DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC--- 233
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-FGYMAPEYVMHGRF 425
IHRDL A N L+ + KISDFGM+R E D ++ + + + APE + +GR+
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSRE-EADGVYAASGGLRQVPVKWTAPEALNYGRY 292
Query: 426 SVKSDIFSFGVLVLEIVS 443
S +SD++SFG+L+ E S
Sbjct: 293 SSESDVWSFGILLWETFS 310
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 140/293 (47%), Gaps = 41/293 (13%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSN-----GET-IAVKRLSKNSKQGE-IEFKNEVLL 293
VA + + + +LGQG FG VY+G+ ET +A+K +++ + E IEF NE +
Sbjct: 16 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 75
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHM---------TWEK 344
+ ++VRLLG + + +++ E + L ++ R M + K
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL--RPEMENNPVLAPPSLSK 133
Query: 345 RYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMDQTHS 403
++ IA G+ YL+ + + +HRDL A N ++ + KI DFGM R ++E D +
Sbjct: 134 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-YYR 189
Query: 404 DTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYA 463
+ + +M+PE + G F+ SD++SFGV++ EI + ++ G E +L +
Sbjct: 190 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFV 247
Query: 464 WRNWNEGAALNLMD--PTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVN 514
EG L+ D P M E+M+ +C Q N RP +++
Sbjct: 248 ----MEGGLLDKPDNCPDM----LFELMR------MCWQYNPKMRPSFLEIIS 286
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 122/230 (53%), Gaps = 27/230 (11%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQ 298
+ +NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 299 HRNLVRLLGFCLERKERILVYEFVP-------NASLDHFIFDPINREHMTWEKRYKIIEG 351
H N+V+LL + LV+EF+ +AS I P+ + ++ +++++G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 115
Query: 352 IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT 411
+A + H R++HRDLK N+L+++E K++DFG+AR F + + + VV T
Sbjct: 116 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-T 166
Query: 412 FGYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 214
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 141/291 (48%), Gaps = 37/291 (12%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSN-----GET-IAVKRLSKNSKQGE-IEFKNEVLL 293
VA + + + +LGQG FG VY+G+ ET +A+K +++ + E IEF NE +
Sbjct: 12 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 71
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFI--FDPI--NREHMTWEKRYKII 349
+ ++VRLLG + + +++ E + L ++ P N + K+I
Sbjct: 72 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 131
Query: 350 E---GIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMDQTHSDT 405
+ IA G+ YL+ + + +HRDL A N ++ + KI DFGM R ++E D +
Sbjct: 132 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-YYRKG 187
Query: 406 NRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWR 465
+ + +M+PE + G F+ SD++SFGV++ EI + ++ G E +L +
Sbjct: 188 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFV-- 243
Query: 466 NWNEGAALNLMD--PTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVN 514
EG L+ D P M E+M+ +C Q N RP +++
Sbjct: 244 --MEGGLLDKPDNCPDM----LFELMR------MCWQYNPKMRPSFLEIIS 282
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 122/230 (53%), Gaps = 27/230 (11%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQ 298
+ +NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 299 HRNLVRLLGFCLERKERILVYEFVP-------NASLDHFIFDPINREHMTWEKRYKIIEG 351
H N+V+LL + LV+EF+ +AS I P+ + ++ +++++G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 115
Query: 352 IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT 411
+A + H R++HRDLK N+L+++E K++DFG+AR F + + + VV T
Sbjct: 116 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-T 166
Query: 412 FGYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 214
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 122/230 (53%), Gaps = 27/230 (11%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQ 298
+ +NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 299 HRNLVRLLGFCLERKERILVYEFVP-------NASLDHFIFDPINREHMTWEKRYKIIEG 351
H N+V+LL + LV+EF+ +AS I P+ + ++ +++++G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 116
Query: 352 IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT 411
+A + H R++HRDLK N+L+++E K++DFG+AR F + + + VV T
Sbjct: 117 LA----FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-T 167
Query: 412 FGYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 215
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 121/228 (53%), Gaps = 27/228 (11%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQHR 300
+NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 301 NLVRLLGFCLERKERILVYEFVP-------NASLDHFIFDPINREHMTWEKRYKIIEGIA 353
N+V+LL + LV+EF+ +AS I P+ + ++ +++++G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 116
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ H R++HRDLK N+L+++E K++DFG+AR F + + + VV T
Sbjct: 117 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLW 167
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 213
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 121/228 (53%), Gaps = 27/228 (11%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQHR 300
+NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 301 NLVRLLGFCLERKERILVYEFVP-------NASLDHFIFDPINREHMTWEKRYKIIEGIA 353
N+V+LL + LV+EF+ +AS I P+ + ++ +++++G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 116
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ H R++HRDLK N+L+++E K++DFG+AR F + + + VV T
Sbjct: 117 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLW 167
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 213
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 121/228 (53%), Gaps = 27/228 (11%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQHR 300
+NF K+G+G +G VYK GE +A+ ++ +++ + E+ LL L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 301 NLVRLLGFCLERKERILVYEFVP-------NASLDHFIFDPINREHMTWEKRYKIIEGIA 353
N+V+LL + LV+EF+ +AS I P+ + ++ +++++G+A
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 117
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ H R++HRDLK N+L+++E K++DFG+AR F + + T+ VV T
Sbjct: 118 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLW 168
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 214
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 121/228 (53%), Gaps = 27/228 (11%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQHR 300
+NF K+G+G +G VYK GE +A+ ++ +++ + E+ LL L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 301 NLVRLLGFCLERKERILVYEFVP-------NASLDHFIFDPINREHMTWEKRYKIIEGIA 353
N+V+LL + LV+EF+ +AS I P+ + ++ +++++G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 116
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ H R++HRDLK N+L+++E K++DFG+AR F + + T+ VV T
Sbjct: 117 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLW 167
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 213
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 121/228 (53%), Gaps = 27/228 (11%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQHR 300
+NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 301 NLVRLLGFCLERKERILVYEFVP-------NASLDHFIFDPINREHMTWEKRYKIIEGIA 353
N+V+LL + LV+EF+ +AS I P+ + ++ +++++G+A
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 118
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ H R++HRDLK N+L+++E K++DFG+AR F + + + VV T
Sbjct: 119 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLW 169
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 215
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 13/218 (5%)
Query: 229 AKSLQFDFETIRVATDNFSDANKLGQGGFGAV-YKGMLSNGETIAVKRLSKNSKQGEIEF 287
A L D R DNF K+G+G G V + S+G+ +AVK++ +Q
Sbjct: 19 ALQLVVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL 75
Query: 288 KNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYK 347
NEV+++ QH N+V + L E +V EF+ +L D + M E+
Sbjct: 76 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAA 131
Query: 348 IIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR 407
+ + + L LH +IHRD+K+ +ILL + K+SDFG ++ +
Sbjct: 132 VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKX 186
Query: 408 VVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
+VGT +MAPE + + + DI+S G++V+E+V G+
Sbjct: 187 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 224
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 133/271 (49%), Gaps = 33/271 (12%)
Query: 251 KLGQGGFGAVYKG--MLSNGETIAVKRLSKNSKQGEIEFKNEVL----LLARLQHRNLVR 304
+LG G FG V KG + ++ KN + + K+E+L ++ +L + +VR
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKN-EANDPALKDELLAEANVMQQLDNPYIVR 435
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
++G C E + +LV E L+ ++ NR H+ + +++ ++ G+ YL E +
Sbjct: 436 MIGIC-EAESWMLVMEMAELGPLNKYLQQ--NR-HVKDKNIIELVHQVSMGMKYLEESN- 490
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPEYVMH 422
+HRDL A N+LL ++ KISDFG+++ D+ + + G + + APE + +
Sbjct: 491 --FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA-QTHGKWPVKWYAPECINY 547
Query: 423 GRFSVKSDIFSFGVLVLEIVS-GQKRSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMR 481
+FS KSD++SFGVL+ E S GQK E +L R + P
Sbjct: 548 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER---------MGCPA-- 596
Query: 482 GGSTSEMMKCIHIGLLCVQENVSNRPGMASV 512
G EM ++ LC +V NRPG A+V
Sbjct: 597 -GCPREMYDLMN---LCWTYDVENRPGFAAV 623
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 133/271 (49%), Gaps = 33/271 (12%)
Query: 251 KLGQGGFGAVYKG--MLSNGETIAVKRLSKNSKQGEIEFKNEVL----LLARLQHRNLVR 304
+LG G FG V KG + ++ KN + + K+E+L ++ +L + +VR
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKN-EANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
++G C E + +LV E L+ ++ NR H+ + +++ ++ G+ YL E +
Sbjct: 93 MIGIC-EAESWMLVMEMAELGPLNKYLQQ--NR-HVKDKNIIELVHQVSMGMKYLEESN- 147
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPEYVMH 422
+HRDL A N+LL ++ KISDFG+++ D+ + + G + + APE + +
Sbjct: 148 --FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA-QTHGKWPVKWYAPECINY 204
Query: 423 GRFSVKSDIFSFGVLVLEIVS-GQKRSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMR 481
+FS KSD++SFGVL+ E S GQK E +L +G +
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML-------EKGERMGC-----P 252
Query: 482 GGSTSEMMKCIHIGLLCVQENVSNRPGMASV 512
G EM ++ LC +V NRPG A+V
Sbjct: 253 AGCPREMYDLMN---LCWTYDVENRPGFAAV 280
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 133/271 (49%), Gaps = 33/271 (12%)
Query: 251 KLGQGGFGAVYKG--MLSNGETIAVKRLSKNSKQGEIEFKNEVL----LLARLQHRNLVR 304
+LG G FG V KG + ++ KN + + K+E+L ++ +L + +VR
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKN-EANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
++G C E + +LV E L+ ++ NR H+ + +++ ++ G+ YL E +
Sbjct: 93 MIGIC-EAESWMLVMEMAELGPLNKYLQQ--NR-HVKDKNIIELVHQVSMGMKYLEESN- 147
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPEYVMH 422
+HRDL A N+LL ++ KISDFG+++ D+ + + G + + APE + +
Sbjct: 148 --FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA-QTHGKWPVKWYAPECINY 204
Query: 423 GRFSVKSDIFSFGVLVLEIVS-GQKRSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMR 481
+FS KSD++SFGVL+ E S GQK E +L +G +
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML-------EKGERMGC-----P 252
Query: 482 GGSTSEMMKCIHIGLLCVQENVSNRPGMASV 512
G EM ++ LC +V NRPG A+V
Sbjct: 253 AGCPREMYDLMN---LCWTYDVENRPGFAAV 280
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 140/293 (47%), Gaps = 41/293 (13%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSN-----GET-IAVKRLSKNSKQGE-IEFKNEVLL 293
VA + + + +LGQG FG VY+G+ ET +A+K +++ + E IEF NE +
Sbjct: 44 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 103
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHM---------TWEK 344
+ ++VRLLG + + +++ E + L ++ R M + K
Sbjct: 104 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL--RPEMENNPVLAPPSLSK 161
Query: 345 RYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMDQTHS 403
++ IA G+ YL+ + + +HRDL A N ++ + KI DFGM R ++E D +
Sbjct: 162 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-YR 217
Query: 404 DTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYA 463
+ + +M+PE + G F+ SD++SFGV++ EI + ++ G E +L +
Sbjct: 218 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFV 275
Query: 464 WRNWNEGAALNLMD--PTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVN 514
EG L+ D P M E+M+ +C Q N RP +++
Sbjct: 276 ----MEGGLLDKPDNCPDM----LFELMR------MCWQYNPKMRPSFLEIIS 314
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 125/280 (44%), Gaps = 26/280 (9%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCLE 311
+G+G FG V K + +A+K++ S++ F E+ L+R+ H N+V+L G CL
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQIESESERKA--FIVELRQLSRVNHPNIVKLYGACL- 72
Query: 312 RKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRD 371
LV E+ SL + + + T ++G+ YLH +IHRD
Sbjct: 73 -NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD 131
Query: 372 LKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSD 430
LK N+LL + KI DFG A QTH N+ G+ +MAPE +S K D
Sbjct: 132 LKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNNK--GSAAWMAPEVFEGSNYSEKCD 186
Query: 431 IFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAAL-NLMDPTMRGGSTSEMM 489
+FS+G+++ E+++ +R F + +A N + NL P S M
Sbjct: 187 VFSWGIILWEVIT--RRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPI-----ESLMT 239
Query: 490 KCIHIGLLCVQENVSNRPGMASVVNMLNGDTVTLPAPSKP 529
+C ++ S RP M +V ++ P +P
Sbjct: 240 RCW-------SKDPSQRPSMEEIVKIMTHLMRYFPGADEP 272
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 13/218 (5%)
Query: 229 AKSLQFDFETIRVATDNFSDANKLGQGGFGAV-YKGMLSNGETIAVKRLSKNSKQGEIEF 287
A L D R DNF K+G+G G V + S+G+ +AVK++ +Q
Sbjct: 17 ALQLVVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL 73
Query: 288 KNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYK 347
NEV+++ QH N+V + L E +V EF+ +L D + M E+
Sbjct: 74 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAA 129
Query: 348 IIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR 407
+ + + L LH +IHRD+K+ +ILL + K+SDFG ++ +
Sbjct: 130 VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKX 184
Query: 408 VVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
+VGT +MAPE + + + DI+S G++V+E+V G+
Sbjct: 185 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 222
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 133/271 (49%), Gaps = 33/271 (12%)
Query: 251 KLGQGGFGAVYKG--MLSNGETIAVKRLSKNSKQGEIEFKNEVL----LLARLQHRNLVR 304
+LG G FG V KG + ++ KN + + K+E+L ++ +L + +VR
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKN-EANDPALKDELLAEANVMQQLDNPYIVR 434
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
++G C E + +LV E L+ ++ NR H+ + +++ ++ G+ YL E +
Sbjct: 435 MIGIC-EAESWMLVMEMAELGPLNKYLQQ--NR-HVKDKNIIELVHQVSMGMKYLEESN- 489
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPEYVMH 422
+HRDL A N+LL ++ KISDFG+++ D+ + + G + + APE + +
Sbjct: 490 --FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA-QTHGKWPVKWYAPECINY 546
Query: 423 GRFSVKSDIFSFGVLVLEIVS-GQKRSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMR 481
+FS KSD++SFGVL+ E S GQK E +L R + P
Sbjct: 547 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER---------MGCPA-- 595
Query: 482 GGSTSEMMKCIHIGLLCVQENVSNRPGMASV 512
G EM ++ LC +V NRPG A+V
Sbjct: 596 -GCPREMYDLMN---LCWTYDVENRPGFAAV 622
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 13/218 (5%)
Query: 229 AKSLQFDFETIRVATDNFSDANKLGQGGFGAV-YKGMLSNGETIAVKRLSKNSKQGEIEF 287
A L D R DNF K+G+G G V + S+G+ +AVK++ +Q
Sbjct: 62 ALQLVVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL 118
Query: 288 KNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYK 347
NEV+++ QH N+V + L E +V EF+ +L D + M E+
Sbjct: 119 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAA 174
Query: 348 IIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR 407
+ + + L LH +IHRD+K+ +ILL + K+SDFG ++ +
Sbjct: 175 VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKX 229
Query: 408 VVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
+VGT +MAPE + + + DI+S G++V+E+V G+
Sbjct: 230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 267
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 13/207 (6%)
Query: 240 RVATDNFSDANKLGQGGFGAV-YKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQ 298
R DNF K+G+G G V + S+G+ +AVK++ +Q NEV+++ Q
Sbjct: 19 RSYLDNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ 75
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
H N+V + L E +V EF+ +L D + M E+ + + + L
Sbjct: 76 HENVVEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSV 131
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPE 418
LH +IHRD+K+ +ILL + K+SDFG ++ + +VGT +MAPE
Sbjct: 132 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPE 186
Query: 419 YVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
+ + + DI+S G++V+E+V G+
Sbjct: 187 LISRLPYGPEVDIWSLGIMVIEMVDGE 213
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 10/196 (5%)
Query: 251 KLGQGGFGAVYKGMLSN-GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
K+G+G G V + G +AVK + +Q NEV+++ QH N+V +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 310 LERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIH 369
L +E ++ EF+ +L D +++ + E+ + E + + L YLH +IH
Sbjct: 112 LVGEELWVLMEFLQGGALT----DIVSQVRLNEEQIATVCEAVLQALAYLHAQG---VIH 164
Query: 370 RDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKS 429
RD+K+ +ILL + K+SDFG ++ + +VGT +MAPE + ++ +
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCA--QISKDVPKRKXLVGTPYWMAPEVISRSLYATEV 222
Query: 430 DIFSFGVLVLEIVSGQ 445
DI+S G++V+E+V G+
Sbjct: 223 DIWSLGIMVIEMVDGE 238
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 133/271 (49%), Gaps = 33/271 (12%)
Query: 251 KLGQGGFGAVYKG--MLSNGETIAVKRLSKNSKQGEIEFKNEVL----LLARLQHRNLVR 304
+LG G FG V KG + ++ KN + + K+E+L ++ +L + +VR
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKN-EANDPALKDELLAEANVMQQLDNPYIVR 90
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
++G C E + +LV E L+ ++ NR H+ + +++ ++ G+ YL E +
Sbjct: 91 MIGIC-EAESWMLVMEMAELGPLNKYLQQ--NR-HVKDKNIIELVHQVSMGMKYLEESN- 145
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPEYVMH 422
+HRDL A N+LL ++ KISDFG+++ D+ + + G + + APE + +
Sbjct: 146 --FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA-QTHGKWPVKWYAPECINY 202
Query: 423 GRFSVKSDIFSFGVLVLEIVS-GQKRSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMR 481
+FS KSD++SFGVL+ E S GQK E +L +G +
Sbjct: 203 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML-------EKGERMGC-----P 250
Query: 482 GGSTSEMMKCIHIGLLCVQENVSNRPGMASV 512
G EM ++ LC +V NRPG A+V
Sbjct: 251 AGCPREMYDLMN---LCWTYDVENRPGFAAV 278
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 125/280 (44%), Gaps = 26/280 (9%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCLE 311
+G+G FG V K + +A+K++ S++ F E+ L+R+ H N+V+L G CL
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQIESESERKA--FIVELRQLSRVNHPNIVKLYGACL- 71
Query: 312 RKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRD 371
LV E+ SL + + + T ++G+ YLH +IHRD
Sbjct: 72 -NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD 130
Query: 372 LKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSD 430
LK N+LL + KI DFG A QTH N+ G+ +MAPE +S K D
Sbjct: 131 LKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNNK--GSAAWMAPEVFEGSNYSEKCD 185
Query: 431 IFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAAL-NLMDPTMRGGSTSEMM 489
+FS+G+++ E+++ +R F + +A N + NL P S M
Sbjct: 186 VFSWGIILWEVIT--RRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPI-----ESLMT 238
Query: 490 KCIHIGLLCVQENVSNRPGMASVVNMLNGDTVTLPAPSKP 529
+C ++ S RP M +V ++ P +P
Sbjct: 239 RCW-------SKDPSQRPSMEEIVKIMTHLMRYFPGADEP 271
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 13/207 (6%)
Query: 240 RVATDNFSDANKLGQGGFGAV-YKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQ 298
R DNF K+G+G G V + S+G+ +AVK++ +Q NEV+++ Q
Sbjct: 23 RSYLDNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ 79
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
H N+V + L E +V EF+ +L D + M E+ + + + L
Sbjct: 80 HENVVEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSV 135
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPE 418
LH +IHRD+K+ +ILL + K+SDFG ++ + +VGT +MAPE
Sbjct: 136 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPE 190
Query: 419 YVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
+ + + DI+S G++V+E+V G+
Sbjct: 191 LISRLPYGPEVDIWSLGIMVIEMVDGE 217
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 9/198 (4%)
Query: 249 ANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIE--FKNEVLLLARLQHRNLVRLL 306
++G+G FG V+ G L T+ + + + +++ F E +L + H N+VRL+
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
G C +++ +V E V D F + + +++ A G+ YL
Sbjct: 179 GVCTQKQPIYIVMELVQGG--DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC--- 233
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT-FGYMAPEYVMHGRF 425
IHRDL A N L+ + KISDFGM+R E D + + + + APE + +GR+
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSR-EEADGVXAASGGLRQVPVKWTAPEALNYGRY 292
Query: 426 SVKSDIFSFGVLVLEIVS 443
S +SD++SFG+L+ E S
Sbjct: 293 SSESDVWSFGILLWETFS 310
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 121/230 (52%), Gaps = 27/230 (11%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQ 298
+ +NF K+G+G +G VYK GE +A+K++ +++ + E+ LL L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 299 HRNLVRLLGFCLERKERILVYEFVP-------NASLDHFIFDPINREHMTWEKRYKIIEG 351
H N+V+LL + LV+E V +AS I P+ + ++ +++++G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 118
Query: 352 IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT 411
+A + H R++HRDLK N+L+++E K++DFG+AR F + + + VV T
Sbjct: 119 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-T 169
Query: 412 FGYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y APE ++ + +S DI+S G + E+V+ +R+ F + E + L
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 217
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLS-----NGET-IAVKRLSKNSKQGE-IEFKNEVLL 293
VA + + + +LGQG FG VY+G+ ET +A+K +++ + E IEF NE +
Sbjct: 9 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHM---------TWEK 344
+ ++VRLLG + + +++ E + L ++ R M + K
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL--RPEMENNPVLAPPSLSK 126
Query: 345 RYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMDQTHS 403
++ IA G+ YL+ + + +HRDL A N + + KI DFGM R ++E D +
Sbjct: 127 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETD-YYR 182
Query: 404 DTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYA 463
+ + +M+PE + G F+ SD++SFGV++ EI + ++ G E +L +
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFV 240
Query: 464 WRNWNEGAALNLMD--PTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVN 514
EG L+ D P M E+M+ +C Q N RP +++
Sbjct: 241 ----MEGGLLDKPDNCPDM----LLELMR------MCWQYNPKMRPSFLEIIS 279
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLSNGETIAVK--RLSKNSKQGEIEFKNEVLLLARLQHRN 301
+ + K+G+G +G VYK + GET A+K RL K + E+ +L L+H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 302 LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHE 361
+V+L +K +LV+E + E +T + + + G+ Y H+
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKS---FLLQLLNGIAYCHD 118
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVM 421
R++HRDLK N+L++ E KI+DFG+AR F + T+ VV T Y AP+ +M
Sbjct: 119 R---RVLHRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEVV-TLWYRAPDVLM 173
Query: 422 -HGRFSVKSDIFSFGVLVLEIVSG 444
++S DI+S G + E+V+G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLSNGETIAVK--RLSKNSKQGEIEFKNEVLLLARLQHRN 301
+ + K+G+G +G VYK + GET A+K RL K + E+ +L L+H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 302 LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHE 361
+V+L +K +LV+E + E +T + + + G+ Y H+
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKS---FLLQLLNGIAYCHD 118
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVM 421
R++HRDLK N+L++ E KI+DFG+AR F + T+ VV T Y AP+ +M
Sbjct: 119 R---RVLHRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEVV-TLWYRAPDVLM 173
Query: 422 -HGRFSVKSDIFSFGVLVLEIVSG 444
++S DI+S G + E+V+G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 133/271 (49%), Gaps = 33/271 (12%)
Query: 251 KLGQGGFGAVYKG--MLSNGETIAVKRLSKNSKQGEIEFKNEVL----LLARLQHRNLVR 304
+LG G FG V KG + ++ KN + + K+E+L ++ +L + +VR
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKN-EANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
++G C E + +LV E L+ ++ NR H+ + +++ ++ G+ YL E +
Sbjct: 77 MIGIC-EAESWMLVMEMAELGPLNKYLQQ--NR-HVKDKNIIELVHQVSMGMKYLEESN- 131
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPEYVMH 422
+HRDL A N+LL ++ KISDFG+++ D+ + + G + + APE + +
Sbjct: 132 --FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA-QTHGKWPVKWYAPECINY 188
Query: 423 GRFSVKSDIFSFGVLVLEIVS-GQKRSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMR 481
+FS KSD++SFGVL+ E S GQK E +L +G +
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML-------EKGERMGC-----P 236
Query: 482 GGSTSEMMKCIHIGLLCVQENVSNRPGMASV 512
G EM ++ LC +V NRPG A+V
Sbjct: 237 AGCPREMYDLMN---LCWTYDVENRPGFAAV 264
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 112/232 (48%), Gaps = 25/232 (10%)
Query: 229 AKSL-QFDFETIRVATDNFSDANKLGQGGFGAVYKG-MLSNGETIAVKRLSKNSKQGEIE 286
A+SL + D +R F +G G +G VYKG + G+ A+K + + E E
Sbjct: 8 ARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEE-E 66
Query: 287 FKNEVLLLARL-QHRNLVRLLGFCLERK------ERILVYEFVPNASLDHFIFDPINREH 339
K E+ +L + HRN+ G +++ + LV EF S+ I N +
Sbjct: 67 IKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI---KNTKG 123
Query: 340 MTWEKRY--KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFE 397
T ++ + I I RGL +LH+ ++IHRD+K N+LL K+ DFG++ +
Sbjct: 124 NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSA--Q 178
Query: 398 MDQTHSDTNRVVGTFGYMAPEYVM-----HGRFSVKSDIFSFGVLVLEIVSG 444
+D+T N +GT +MAPE + + KSD++S G+ +E+ G
Sbjct: 179 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 133/271 (49%), Gaps = 33/271 (12%)
Query: 251 KLGQGGFGAVYKG--MLSNGETIAVKRLSKNSKQGEIEFKNEVL----LLARLQHRNLVR 304
+LG G FG V KG + ++ KN + + K+E+L ++ +L + +VR
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKN-EANDPALKDELLAEANVMQQLDNPYIVR 82
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
++G C E + +LV E L+ ++ NR H+ + +++ ++ G+ YL E +
Sbjct: 83 MIGIC-EAESWMLVMEMAELGPLNKYLQQ--NR-HVKDKNIIELVHQVSMGMKYLEESN- 137
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPEYVMH 422
+HRDL A N+LL ++ KISDFG+++ D+ + + G + + APE + +
Sbjct: 138 --FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA-QTHGKWPVKWYAPECINY 194
Query: 423 GRFSVKSDIFSFGVLVLEIVS-GQKRSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMR 481
+FS KSD++SFGVL+ E S GQK E +L +G +
Sbjct: 195 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML-------EKGERMGC-----P 242
Query: 482 GGSTSEMMKCIHIGLLCVQENVSNRPGMASV 512
G EM ++ LC +V NRPG A+V
Sbjct: 243 AGCPREMYDLMN---LCWTYDVENRPGFAAV 270
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLSNGETIAVK--RLSKNSKQGEIEFKNEVLLLARLQHRN 301
+ + K+G+G +G VYK + GET A+K RL K + E+ +L L+H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 302 LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHE 361
+V+L +K +LV+E + E +T + + + G+ Y H+
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKS---FLLQLLNGIAYCHD 118
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVM 421
R++HRDLK N+L++ E KI+DFG+AR F + T+ +V T Y AP+ +M
Sbjct: 119 R---RVLHRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEIV-TLWYRAPDVLM 173
Query: 422 -HGRFSVKSDIFSFGVLVLEIVSG 444
++S DI+S G + E+V+G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 133/271 (49%), Gaps = 33/271 (12%)
Query: 251 KLGQGGFGAVYKG--MLSNGETIAVKRLSKNSKQGEIEFKNEVL----LLARLQHRNLVR 304
+LG G FG V KG + ++ KN + + K+E+L ++ +L + +VR
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKN-EANDPALKDELLAEANVMQQLDNPYIVR 70
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
++G C E + +LV E L+ ++ NR H+ + +++ ++ G+ YL E +
Sbjct: 71 MIGIC-EAESWMLVMEMAELGPLNKYL--QQNR-HVKDKNIIELVHQVSMGMKYLEESN- 125
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPEYVMH 422
+HRDL A N+LL ++ KISDFG+++ D+ + + G + + APE + +
Sbjct: 126 --FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA-QTHGKWPVKWYAPECINY 182
Query: 423 GRFSVKSDIFSFGVLVLEIVS-GQKRSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMR 481
+FS KSD++SFGVL+ E S GQK E +L +G +
Sbjct: 183 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML-------EKGERMGC-----P 230
Query: 482 GGSTSEMMKCIHIGLLCVQENVSNRPGMASV 512
G EM ++ LC +V NRPG A+V
Sbjct: 231 AGCPREMYDLMN---LCWTYDVENRPGFAAV 258
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 10/196 (5%)
Query: 251 KLGQGGFGAVYKGMLSN-GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
K+G+G G V + G+ +AVK++ +Q NEV+++ H N+V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 310 LERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIH 369
L E +V EF+ +L D + M E+ + + R L YLH +IH
Sbjct: 112 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIATVCLSVLRALSYLHNQG---VIH 164
Query: 370 RDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKS 429
RD+K+ +ILL S+ K+SDFG ++ + +VGT +MAPE + + +
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCA--QVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 430 DIFSFGVLVLEIVSGQ 445
DI+S G++V+E++ G+
Sbjct: 223 DIWSLGIMVIEMIDGE 238
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 133/271 (49%), Gaps = 33/271 (12%)
Query: 251 KLGQGGFGAVYKG--MLSNGETIAVKRLSKNSKQGEIEFKNEVL----LLARLQHRNLVR 304
+LG G FG V KG + ++ KN + + K+E+L ++ +L + +VR
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKN-EANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
++G C E + +LV E L+ ++ NR H+ + +++ ++ G+ YL E +
Sbjct: 73 MIGIC-EAESWMLVMEMAELGPLNKYL--QQNR-HVKDKNIIELVHQVSMGMKYLEESN- 127
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF--GYMAPEYVMH 422
+HRDL A N+LL ++ KISDFG+++ D+ + + G + + APE + +
Sbjct: 128 --FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA-QTHGKWPVKWYAPECINY 184
Query: 423 GRFSVKSDIFSFGVLVLEIVS-GQKRSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMR 481
+FS KSD++SFGVL+ E S GQK E +L +G +
Sbjct: 185 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML-------EKGERMGC-----P 232
Query: 482 GGSTSEMMKCIHIGLLCVQENVSNRPGMASV 512
G EM ++ LC +V NRPG A+V
Sbjct: 233 AGCPREMYDLMN---LCWTYDVENRPGFAAV 260
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 131/275 (47%), Gaps = 41/275 (14%)
Query: 251 KLGQGGFGAVYKG--MLSNGETIAVKRLSKNSKQGEIEFKNEVL----LLARLQHRNLVR 304
+LG G FG V KG + ++ KN + + K+E+L ++ +L + +VR
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKN-EANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
++G C E + +LV E L+ ++ NR H+ + +++ ++ G+ YL E +
Sbjct: 77 MIGIC-EAESWMLVMEMAELGPLNKYLQQ--NR-HVKDKNIIELVHQVSMGMKYLEESN- 131
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMD------QTHSDTNRVVGTFGYMAPE 418
+HRDL A N+LL ++ KISDFG+++ D QTH + APE
Sbjct: 132 --FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKW-----PVKWYAPE 184
Query: 419 YVMHGRFSVKSDIFSFGVLVLEIVS-GQKRSSFGTEEETEDLLTYAWRNWNEGAALNLMD 477
+ + +FS KSD++SFGVL+ E S GQK E +L +G +
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML-------EKGERMGC-- 235
Query: 478 PTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASV 512
G EM ++ LC +V NRPG A+V
Sbjct: 236 ---PAGCPREMYDLMN---LCWTYDVENRPGFAAV 264
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 110/224 (49%), Gaps = 28/224 (12%)
Query: 244 DNFSDANKLGQGGFGAVY--------KGMLSNGETIAVKRLSKNSKQGEI-EFKNEVLLL 294
D + LG+G FG V K T+AVK L ++ + ++ + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 295 ARL-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI-----------FDPINR---EH 339
+ +H+N++ LLG C + ++ E+ +L ++ +D INR E
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQ 153
Query: 340 MTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMD 399
MT++ +ARG+ YL + + IHRDL A N+L+ KI+DFG+AR
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 400 QTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ +T +MAPE + ++ +SD++SFGVL+ EI +
Sbjct: 211 DYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 113/225 (50%), Gaps = 30/225 (13%)
Query: 244 DNFSDANKLGQGGFGAVY--------KGMLSNGETIAVKRLSKNSKQGEI-EFKNEVLLL 294
D + LG+G FG V K T+AVK L ++ + ++ + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 295 ARL-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI-----------FDPINR---EH 339
+ +H+N++ LLG C + ++ E+ +L ++ +D INR E
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYD-INRVPEEQ 153
Query: 340 MTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEM 398
MT++ +ARG+ YL + + IHRDL A N+L+ KI+DFG+AR + +
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 399 DQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
D TN + +MAPE + ++ +SD++SFGVL+ EI +
Sbjct: 211 DXXKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 131/303 (43%), Gaps = 34/303 (11%)
Query: 232 LQFDFETIRVATDNFSDANKLGQGGFGAVYKG------MLSNGETIAVKRLSKNSKQGEI 285
L +D D + LG+G FG V + + T+AVK L + + E
Sbjct: 15 LPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH 74
Query: 286 E-FKNEVLLLARL-QHRNLVRLLGFCLERKERILV-YEFVPNASLDHFI---------FD 333
+E+ +L + H N+V LLG C + ++V EF +L ++ +
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 334 PINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMA 393
+ ++ +T E +A+G+ +L + + IHRDL A NILL + KI DFG+A
Sbjct: 135 DLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLA 191
Query: 394 RLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTE 453
R D + +MAPE + ++++SD++SFGVL+ EI S G +
Sbjct: 192 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 251
Query: 454 EETEDLLTYAWRNWNEGAALNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVV 513
+ E R EG + D T T EM + + L C S RP + +V
Sbjct: 252 IDEEFX-----RRLKEGTRMRAPDYT-----TPEMYQTM---LDCWHGEPSQRPTFSELV 298
Query: 514 NML 516
L
Sbjct: 299 EHL 301
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 113/225 (50%), Gaps = 30/225 (13%)
Query: 244 DNFSDANKLGQGGFGAVY--------KGMLSNGETIAVKRLSKNSKQGEI-EFKNEVLLL 294
D + LG+G FG V K T+AVK L ++ + ++ + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 295 ARL-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI-----------FDPINR---EH 339
+ +H+N++ LLG C + ++ E+ +L ++ +D INR E
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQ 153
Query: 340 MTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEM 398
MT++ +ARG+ YL + + IHRDL A N+L+ KI+DFG+AR + +
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 399 DQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
D TN + +MAPE + ++ +SD++SFGVL+ EI +
Sbjct: 211 DXXKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 28/224 (12%)
Query: 244 DNFSDANKLGQGGFGAVY--------KGMLSNGETIAVKRLSKNSKQGEI-EFKNEVLLL 294
D + LG+G FG V K T+AVK L ++ + ++ + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 295 ARL-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI-----------FDPINR---EH 339
+ +H+N++ LLG C + ++ E+ +L ++ +D INR E
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQ 153
Query: 340 MTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMD 399
MT++ +ARG+ YL + + IHRDL A N+L+ KI+DFG+AR
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 400 QTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ T +MAPE + ++ +SD++SFGVL+ EI +
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 28/224 (12%)
Query: 244 DNFSDANKLGQGGFGAVY--------KGMLSNGETIAVKRLSKNSKQGEI-EFKNEVLLL 294
D + LG+G FG V K T+AVK L ++ + ++ + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 295 ARL-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI-----------FDPINR---EH 339
+ +H+N++ LLG C + ++ E+ +L ++ +D INR E
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQ 153
Query: 340 MTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMD 399
MT++ +ARG+ YL + + IHRDL A N+L+ KI+DFG+AR
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 400 QTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ T +MAPE + ++ +SD++SFGVL+ EI +
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 131/303 (43%), Gaps = 34/303 (11%)
Query: 232 LQFDFETIRVATDNFSDANKLGQGGFGAVYKG------MLSNGETIAVKRLSKNSKQGEI 285
L +D D + LG+G FG V + + T+AVK L + + E
Sbjct: 15 LPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH 74
Query: 286 E-FKNEVLLLARL-QHRNLVRLLGFCLERKERILV-YEFVPNASLDHFI---------FD 333
+E+ +L + H N+V LLG C + ++V EF +L ++ +
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 334 PINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMA 393
+ ++ +T E +A+G+ +L + + IHRDL A NILL + KI DFG+A
Sbjct: 135 DLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLA 191
Query: 394 RLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTE 453
R D + +MAPE + ++++SD++SFGVL+ EI S G +
Sbjct: 192 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 251
Query: 454 EETEDLLTYAWRNWNEGAALNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVV 513
+ E R EG + D T T EM + + L C S RP + +V
Sbjct: 252 IDEEFC-----RRLKEGTRMRAPDYT-----TPEMYQTM---LDCWHGEPSQRPTFSELV 298
Query: 514 NML 516
L
Sbjct: 299 EHL 301
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 116/245 (47%), Gaps = 22/245 (8%)
Query: 220 EDENVEETIAKSLQFDFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSK 278
E+ EE +K + + + A ++F LG+G FG VY + I A+K L K
Sbjct: 10 ENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK 69
Query: 279 NS--KQG-EIEFKNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPI 335
K G E + + EV + + L+H N++RL G+ + L+ E+ P + ++ +
Sbjct: 70 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYREL 125
Query: 336 NREHMTWEKRYKI-IEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR 394
+ E+R I +A L Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 126 QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS- 181
Query: 395 LFEMDQTHSDTNR---VVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFG 451
H+ ++R + GT Y+ PE + K D++S GVL E + G+
Sbjct: 182 ------VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
Query: 452 TEEET 456
T +ET
Sbjct: 236 TYQET 240
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 28/224 (12%)
Query: 244 DNFSDANKLGQGGFGAVY--------KGMLSNGETIAVKRLSKNSKQGEI-EFKNEVLLL 294
D + LG+G FG V K T+AVK L ++ + ++ + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 295 ARL-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI-----------FDPINR---EH 339
+ +H+N++ LLG C + ++ E+ +L ++ +D INR E
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQ 153
Query: 340 MTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMD 399
MT++ +ARG+ YL + + IHRDL A N+L+ KI+DFG+AR
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 400 QTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ T +MAPE + ++ +SD++SFGVL+ EI +
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 107/212 (50%), Gaps = 19/212 (8%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS-KNSKQG-EIEFKNEVLLLARL 297
+AT + ++G G +G VYK +G +A+K + N ++G I EV LL RL
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 298 Q---HRNLVRLLGFC-LERKER----ILVYEFVPNASLDHFIFDPINREHMTWEKRYKII 349
+ H N+VRL+ C R +R LV+E V + L ++ D + E ++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLM 118
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVV 409
RGL +LH + I+HRDLK NIL+ S K++DFG+AR++ + VV
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA---LDPVV 172
Query: 410 GTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEI 441
T Y APE ++ ++ D++S G + E+
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 28/224 (12%)
Query: 244 DNFSDANKLGQGGFGAVY--------KGMLSNGETIAVKRLSKNSKQGEI-EFKNEVLLL 294
D + LG+G FG V K T+AVK L ++ + ++ + +E+ ++
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 295 ARL-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI-----------FDPINR---EH 339
+ +H+N++ LLG C + ++ E+ +L ++ +D INR E
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQ 199
Query: 340 MTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMD 399
MT++ +ARG+ YL + + IHRDL A N+L+ KI+DFG+AR
Sbjct: 200 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 256
Query: 400 QTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ T +MAPE + ++ +SD++SFGVL+ EI +
Sbjct: 257 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 116/245 (47%), Gaps = 22/245 (8%)
Query: 220 EDENVEETIAKSLQFDFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSK 278
E+ EE +K + + + A ++F LG+G FG VY + I A+K L K
Sbjct: 10 ENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK 69
Query: 279 NS--KQG-EIEFKNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPI 335
K G E + + EV + + L+H N++RL G+ + L+ E+ P + ++ +
Sbjct: 70 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYREL 125
Query: 336 NREHMTWEKRYKI-IEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR 394
+ E+R I +A L Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 126 QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS- 181
Query: 395 LFEMDQTHSDTNR---VVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFG 451
H+ ++R + GT Y+ PE + K D++S GVL E + G+
Sbjct: 182 ------VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
Query: 452 TEEET 456
T +ET
Sbjct: 236 TYQET 240
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 28/224 (12%)
Query: 244 DNFSDANKLGQGGFGAVY--------KGMLSNGETIAVKRLSKNSKQGEI-EFKNEVLLL 294
D + LG+G FG V K T+AVK L ++ + ++ + +E+ ++
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 295 ARL-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI-----------FDPINR---EH 339
+ +H+N++ LLG C + ++ E+ +L ++ +D INR E
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQ 145
Query: 340 MTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMD 399
MT++ +ARG+ YL + + IHRDL A N+L+ KI+DFG+AR
Sbjct: 146 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 202
Query: 400 QTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ T +MAPE + ++ +SD++SFGVL+ EI +
Sbjct: 203 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 107/212 (50%), Gaps = 19/212 (8%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS-KNSKQG-EIEFKNEVLLLARL 297
+AT + ++G G +G VYK +G +A+K + N ++G I EV LL RL
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 298 Q---HRNLVRLLGFC-LERKER----ILVYEFVPNASLDHFIFDPINREHMTWEKRYKII 349
+ H N+VRL+ C R +R LV+E V + L ++ D + E ++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLM 118
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVV 409
RGL +LH + I+HRDLK NIL+ S K++DFG+AR++ + VV
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAP---VV 172
Query: 410 GTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEI 441
T Y APE ++ ++ D++S G + E+
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 28/224 (12%)
Query: 244 DNFSDANKLGQGGFGAVY--------KGMLSNGETIAVKRLSKNSKQGEI-EFKNEVLLL 294
D + LG+G FG V K T+AVK L ++ + ++ + +E+ ++
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 295 ARL-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI-----------FDPINR---EH 339
+ +H+N++ LLG C + ++ E+ +L ++ +D INR E
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQ 142
Query: 340 MTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMD 399
MT++ +ARG+ YL + + IHRDL A N+L+ KI+DFG+AR
Sbjct: 143 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 199
Query: 400 QTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ T +MAPE + ++ +SD++SFGVL+ EI +
Sbjct: 200 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 28/224 (12%)
Query: 244 DNFSDANKLGQGGFGAVY--------KGMLSNGETIAVKRLSKNSKQGEI-EFKNEVLLL 294
D + LG+G FG V K T+AVK L ++ + ++ + +E+ ++
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 295 ARL-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI-----------FDPINR---EH 339
+ +H+N++ LLG C + ++ E+ +L ++ +D INR E
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQ 140
Query: 340 MTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMD 399
MT++ +ARG+ YL + + IHRDL A N+L+ KI+DFG+AR
Sbjct: 141 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNI 197
Query: 400 QTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ T +MAPE + ++ +SD++SFGVL+ EI +
Sbjct: 198 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 133/310 (42%), Gaps = 38/310 (12%)
Query: 229 AKSLQFDFETIRVATDNFSDANKLGQGGFGAVYKG------MLSNGETIAVKRLSKNSKQ 282
A+ L +D D LG+G FG V + + T+AVK L + +
Sbjct: 3 AERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH 62
Query: 283 GEIE-FKNEVLLLARL-QHRNLVRLLGFCLERKERILVY-EFVPNASLDHFI------FD 333
E +E+ +L + H N+V LLG C + ++V EF +L ++ F
Sbjct: 63 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFV 122
Query: 334 P-------INREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPK 386
P + ++ +T E +A+G+ +L + + IHRDL A NILL + K
Sbjct: 123 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVK 179
Query: 387 ISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQK 446
I DFG+AR D + +MAPE + ++++SD++SFGVL+ EI S
Sbjct: 180 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 239
Query: 447 RSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNR 506
G + + E R EG + D T T EM + + L C S R
Sbjct: 240 SPYPGVKIDEEFC-----RRLKEGTRMRAPDYT-----TPEMYQTM---LDCWHGEPSQR 286
Query: 507 PGMASVVNML 516
P + +V L
Sbjct: 287 PTFSELVEHL 296
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 111/218 (50%), Gaps = 16/218 (7%)
Query: 235 DFETIRVATDN---FSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIE-FKNE 290
++E +R D + +LG G FG VYK +A ++ + + E+E + E
Sbjct: 7 EYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVE 66
Query: 291 VLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIE 350
+ +LA H +V+LLG + ++ EF P ++D + + ++R +T + +
Sbjct: 67 IEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLE-LDR-GLTEPQIQVVCR 124
Query: 351 GIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVG 410
+ L +LH RIIHRDLKA N+L+ E + +++DFG++ + +T + +G
Sbjct: 125 QMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSA--KNLKTLQKRDSFIG 179
Query: 411 TFGYMAPEYVM-----HGRFSVKSDIFSFGVLVLEIVS 443
T +MAPE VM + K+DI+S G+ ++E+
Sbjct: 180 TPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQ 217
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 129/311 (41%), Gaps = 47/311 (15%)
Query: 232 LQFDFETIRVATDNFSDANKLGQGGFGAVYKG------MLSNGETIAVKRLSKNSKQGEI 285
L +D D + LG+G FG V + + T+AVK L + + E
Sbjct: 16 LPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH 75
Query: 286 E-FKNEVLLLARL-QHRNLVRLLGFCLERKERILVY------------------EFVPNA 325
+E+ +L + H N+V LLG C + ++V EFVP
Sbjct: 76 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 135
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNP 385
+ + D + EH+ Y +A+G+ +L + + IHRDL A NILL +
Sbjct: 136 TPEDLYKDFLTLEHLIC---YSF--QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVV 187
Query: 386 KISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
KI DFG+AR D +MAPE + ++++SD++SFGVL+ EI S
Sbjct: 188 KICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 247
Query: 446 KRSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSN 505
G + + E R EG + D T T EM + + L C S
Sbjct: 248 ASPYPGVKIDEEFC-----RRLKEGTRMRAPDYT-----TPEMYQTM---LDCWHGEPSQ 294
Query: 506 RPGMASVVNML 516
RP + +V L
Sbjct: 295 RPTFSELVEHL 305
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 109/224 (48%), Gaps = 28/224 (12%)
Query: 244 DNFSDANKLGQGGFGAVY--------KGMLSNGETIAVKRLSKNSKQGEI-EFKNEVLLL 294
D + LG+G FG V K T+AVK L ++ + ++ + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 295 ARL-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI-----------FDPINR---EH 339
+ +H+N++ LLG C + ++ E+ +L ++ +D INR E
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQ 153
Query: 340 MTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMD 399
MT++ +ARG+ YL + + IHRDL A N+L+ +I+DFG+AR
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNI 210
Query: 400 QTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ T +MAPE + ++ +SD++SFGVL+ EI +
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 104/197 (52%), Gaps = 13/197 (6%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIE-FKNEVLLLARLQHRNLVRLLGFC 309
+LG G FG VYK +A ++ + + E+E + E+ +LA H +V+LLG
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 310 LERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIH 369
+ ++ EF P ++D + + ++R +T + + + L +LH RIIH
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLE-LDR-GLTEPQIQVVCRQMLEALNFLHSK---RIIH 132
Query: 370 RDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVM-----HGR 424
RDLKA N+L+ E + +++DFG++ + +T + +GT +MAPE VM
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSA--KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 190
Query: 425 FSVKSDIFSFGVLVLEI 441
+ K+DI+S G+ ++E+
Sbjct: 191 YDYKADIWSLGITLIEM 207
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 34/215 (15%)
Query: 252 LGQGGFGAVYKGMLSNG---ETIAVKRLSK-NSKQGEIEFKNEVLLLARLQHR-NLVRLL 306
+G+G FG V K + A+KR+ + SK +F E+ +L +L H N++ LL
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 307 GFCLERKERILVYEFVPNASLDHFI-------FDPI------NREHMTWEKRYKIIEGIA 353
G C R L E+ P+ +L F+ DP ++ ++ +A
Sbjct: 83 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 142
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
RG+ YL S+ + IHRDL A NIL+ KI+DFG++R E+ V T G
Sbjct: 143 RGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV--------YVKKTMG 191
Query: 414 -----YMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+MA E + + ++ SD++S+GVL+ EIVS
Sbjct: 192 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 105/211 (49%), Gaps = 27/211 (12%)
Query: 251 KLGQGGFGAVYKGMLSNGET---IAVKRLS-----------KNSKQGEIEFKNEVLLLAR 296
KLG G +G V NG + I V + S KN ++ E NE+ LL
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 297 LQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGL 356
L H N+++L ++K LV EF L I INR I++ I G+
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI---INRHKFDECDAANIMKQILSGI 159
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSE---MNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
YLH+ + I+HRD+K NILL+++ +N KI DFG++ F D D +GT
Sbjct: 160 CYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR---LGTAY 213
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y+APE V+ +++ K D++S GV++ ++ G
Sbjct: 214 YIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 34/215 (15%)
Query: 252 LGQGGFGAVYKGMLSNG---ETIAVKRLSK-NSKQGEIEFKNEVLLLARLQHR-NLVRLL 306
+G+G FG V K + A+KR+ + SK +F E+ +L +L H N++ LL
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 307 GFCLERKERILVYEFVPNASLDHFI-------FDPI------NREHMTWEKRYKIIEGIA 353
G C R L E+ P+ +L F+ DP ++ ++ +A
Sbjct: 93 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 152
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
RG+ YL S+ + IHRDL A NIL+ KI+DFG++R E+ V T G
Sbjct: 153 RGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV--------YVKKTMG 201
Query: 414 -----YMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+MA E + + ++ SD++S+GVL+ EIVS
Sbjct: 202 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSN-GETIAVKRL--SKNSKQGEIEFKNEVLLLARLQ 298
+ + + + +G+G +G V K + G +A+K+ S + K + E+ LL +L+
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKR-YKIIEGIARGLL 357
H NLV LL C ++K LV+EFV + LD P ++ +K ++II GI G
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGI--GFC 140
Query: 358 YLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAP 417
+ H IIHRD+K NIL+ K+ DFG AR D V T Y AP
Sbjct: 141 HSH-----NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE--VATRWYRAP 193
Query: 418 EYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
E ++ ++ D+++ G LV E+ G+
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 130/305 (42%), Gaps = 36/305 (11%)
Query: 232 LQFDFETIRVATDNFSDANKLGQGGFGAVYKG------MLSNGETIAVKRLSKNSKQGEI 285
L +D D LG+G FG V + + T+AVK L + + E
Sbjct: 17 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH 76
Query: 286 E-FKNEVLLLARL-QHRNLVRLLGFCLERKERILV-YEFVPNASLDHFI------FDP-- 334
+E+ +L + H N+V LLG C + ++V EF +L ++ F P
Sbjct: 77 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 136
Query: 335 ---INREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFG 391
+ ++ +T E +A+G+ +L + + IHRDL A NILL + KI DFG
Sbjct: 137 PEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFG 193
Query: 392 MARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFG 451
+AR D +MAPE + ++++SD++SFGVL+ EI S G
Sbjct: 194 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Query: 452 TEEETEDLLTYAWRNWNEGAALNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMAS 511
+ + E R EG + D T T EM + + L C S RP +
Sbjct: 254 VKIDEEFC-----RRLKEGTRMRAPDYT-----TPEMYQTM---LDCWHGEPSQRPTFSE 300
Query: 512 VVNML 516
+V L
Sbjct: 301 LVEHL 305
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 106/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P ++ + + E+R I +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGE----VYKELQKLSKFDEQRTATYITELANAL 126
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLD 176
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 131/307 (42%), Gaps = 38/307 (12%)
Query: 232 LQFDFETIRVATDNFSDANKLGQGGFGAVYKG------MLSNGETIAVKRLSKNSKQGEI 285
L +D D LG+G FG V + + T+AVK L + + E
Sbjct: 15 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH 74
Query: 286 E-FKNEVLLLARL-QHRNLVRLLGFCLERKERILV-YEFVPNASLDHFI------FDP-- 334
+E+ +L + H N+V LLG C + ++V EF +L ++ F P
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 335 -----INREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISD 389
+ ++ +T E +A+G+ +L + + IHRDL A NILL + KI D
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICD 191
Query: 390 FGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSS 449
FG+AR D + +MAPE + ++++SD++SFGVL+ EI S
Sbjct: 192 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
Query: 450 FGTEEETEDLLTYAWRNWNEGAALNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGM 509
G + + E R EG + D T T EM + + L C S RP
Sbjct: 252 PGVKIDEEFC-----RRLKEGTRMRAPDYT-----TPEMYQTM---LDCWHGEPSQRPTF 298
Query: 510 ASVVNML 516
+ +V L
Sbjct: 299 SELVEHL 305
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 22/240 (9%)
Query: 225 EETIAKSLQFDFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--K 281
EE +K + + + A ++F LG+G FG VY + I A+K L K K
Sbjct: 6 EELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEK 65
Query: 282 QG-EIEFKNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHM 340
G E + + EV + + L+H N++RL G+ + L+ E+ P + ++ + +
Sbjct: 66 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSK 121
Query: 341 TWEKRYKI-IEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMD 399
E+R I +A L Y H R+IHRD+K N+LL S KI+DFG +
Sbjct: 122 FDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS------ 172
Query: 400 QTHSDTNR---VVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
H+ ++R + GT Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 173 -VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 231
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 131/307 (42%), Gaps = 38/307 (12%)
Query: 232 LQFDFETIRVATDNFSDANKLGQGGFGAVYKG------MLSNGETIAVKRLSKNSKQGEI 285
L +D D LG+G FG V + + T+AVK L + + E
Sbjct: 17 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH 76
Query: 286 E-FKNEVLLLARL-QHRNLVRLLGFCLERKERILV-YEFVPNASLDHFI------FDP-- 334
+E+ +L + H N+V LLG C + ++V EF +L ++ F P
Sbjct: 77 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 136
Query: 335 -----INREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISD 389
+ ++ +T E +A+G+ +L + + IHRDL A NILL + KI D
Sbjct: 137 EAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICD 193
Query: 390 FGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSS 449
FG+AR D + +MAPE + ++++SD++SFGVL+ EI S
Sbjct: 194 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 253
Query: 450 FGTEEETEDLLTYAWRNWNEGAALNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGM 509
G + + E R EG + D T T EM + + L C S RP
Sbjct: 254 PGVKIDEEFC-----RRLKEGTRMRAPDYT-----TPEMYQTM---LDCWHGEPSQRPTF 300
Query: 510 ASVVNML 516
+ +V L
Sbjct: 301 SELVEHL 307
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 22/212 (10%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS---KNSKQGEIEFKNEVLLLARLQHR 300
NF K+G+G F VY+ L +G +A+K++ + + E+ LL +L H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKR-------YKIIEGIA 353
N+++ +E E +V E L I +H +KR +K +
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMI------KHFKKQKRLIPERTVWKYFVQLC 146
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
L ++H SR R++HRD+K +N+ + + K+ D G+ R F T + + +VGT
Sbjct: 147 SALEHMH--SR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPY 201
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
YM+PE + ++ KSDI+S G L+ E+ + Q
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQ 233
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 106/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P ++ + + E+R I +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGE----VYKELQKLSKFDEQRTATYITELANAL 126
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLXGTLD 176
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 105/202 (51%), Gaps = 21/202 (10%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETIAVK-----RLSKNSKQGEIEFKNEVLLLARLQ 298
N+ LG+G FG V + G+ +A+K L+K+ QG IE E+ L L+
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 71
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
H ++++L + E I+V E+ N D+ + R+ M+ ++ + + I + Y
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEY 127
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPE 418
H R +I+HRDLK N+LLD +N KI+DFG++ + D T+ G+ Y APE
Sbjct: 128 CH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTS--CGSPNYAAPE 181
Query: 419 YVMHGRFSV--KSDIFSFGVLV 438
V+ G+ + D++S GV++
Sbjct: 182 -VISGKLYAGPEVDVWSCGVIL 202
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 132/310 (42%), Gaps = 38/310 (12%)
Query: 229 AKSLQFDFETIRVATDNFSDANKLGQGGFGAVYKG------MLSNGETIAVKRLSKNSKQ 282
A+ L +D D LG+G FG V + + T+AVK L + +
Sbjct: 3 AERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH 62
Query: 283 GEIE-FKNEVLLLARL-QHRNLVRLLGFCLERKERILVY-EFVPNASLDHFI------FD 333
E +E+ +L + H N+V LLG C + ++V EF +L ++ F
Sbjct: 63 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFV 122
Query: 334 P-------INREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPK 386
P + ++ +T E +A+G+ +L + + IHRDL A NILL + K
Sbjct: 123 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVK 179
Query: 387 ISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQK 446
I DFG+AR D +MAPE + ++++SD++SFGVL+ EI S
Sbjct: 180 ICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 239
Query: 447 RSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNR 506
G + + E R EG + D T T EM + + L C S R
Sbjct: 240 SPYPGVKIDEEFC-----RRLKEGTRMRAPDYT-----TPEMYQTM---LDCWHGEPSQR 286
Query: 507 PGMASVVNML 516
P + +V L
Sbjct: 287 PTFSELVEHL 296
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 132/310 (42%), Gaps = 38/310 (12%)
Query: 229 AKSLQFDFETIRVATDNFSDANKLGQGGFGAVYKG------MLSNGETIAVKRLSKNSKQ 282
A+ L +D D LG+G FG V + + T+AVK L + +
Sbjct: 3 AERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH 62
Query: 283 GEIE-FKNEVLLLARL-QHRNLVRLLGFCLERKERILV-YEFVPNASLDHFI------FD 333
E +E+ +L + H N+V LLG C + ++V EF +L ++ F
Sbjct: 63 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 122
Query: 334 P-------INREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPK 386
P + ++ +T E +A+G+ +L + + IHRDL A NILL + K
Sbjct: 123 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVK 179
Query: 387 ISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQK 446
I DFG+AR D +MAPE + ++++SD++SFGVL+ EI S
Sbjct: 180 ICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 239
Query: 447 RSSFGTEEETEDLLTYAWRNWNEGAALNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNR 506
G + + E R EG + D T T EM + + L C S R
Sbjct: 240 SPYPGVKIDEEFC-----RRLKEGTRMRAPDYT-----TPEMYQTM---LDCWHGEPSQR 286
Query: 507 PGMASVVNML 516
P + +V L
Sbjct: 287 PTFSELVEHL 296
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 105/202 (51%), Gaps = 21/202 (10%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETIAVK-----RLSKNSKQGEIEFKNEVLLLARLQ 298
N+ LG+G FG V + G+ +A+K L+K+ QG IE E+ L L+
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 66
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
H ++++L + E I+V E+ N D+ + R+ M+ ++ + + I + Y
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEY 122
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPE 418
H R +I+HRDLK N+LLD +N KI+DFG++ + D T+ G+ Y APE
Sbjct: 123 CH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTS--CGSPNYAAPE 176
Query: 419 YVMHGRFSV--KSDIFSFGVLV 438
V+ G+ + D++S GV++
Sbjct: 177 -VISGKLYAGPEVDVWSCGVIL 197
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 131/282 (46%), Gaps = 30/282 (10%)
Query: 252 LGQGGFGAV--YKGMLSN---GETIAVKRLSKN-SKQGEIEFKNEVLLLARLQHRNLVRL 305
LG+G FG V Y +N GE +AVK L + Q +K E+ +L L H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 306 LGFCLERKERIL--VYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
G C ++ E+ L V E+VP SL D + R + + + I G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLR----DYLPRHSIGLAQLLLFAQQICEGMAYLHSQ- 136
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLF----EMDQTHSDTNRVVGTFGYMAPEY 419
IHR+L A N+LLD++ KI DFG+A+ E + D + V F Y APE
Sbjct: 137 --HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV--FWY-APEC 191
Query: 420 VMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAALNLMDPT 479
+ +F SD++SFGV + E+++ SS + +L+ A + L L +
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT-HCDSSQSPPTKFLELIGIA---QGQMTVLRLTELL 247
Query: 480 MRGGSTSEMMKC----IHIGLLCVQENVSNRPGMASVVNMLN 517
RG KC H+ C + S RP +++ +L
Sbjct: 248 ERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILK 289
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 105/202 (51%), Gaps = 21/202 (10%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETIAVK-----RLSKNSKQGEIEFKNEVLLLARLQ 298
N+ LG+G FG V + G+ +A+K L+K+ QG IE E+ L L+
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 72
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
H ++++L + E I+V E+ N D+ + R+ M+ ++ + + I + Y
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEY 128
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPE 418
H R +I+HRDLK N+LLD +N KI+DFG++ + D T+ G+ Y APE
Sbjct: 129 CH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTS--CGSPNYAAPE 182
Query: 419 YVMHGRFSV--KSDIFSFGVLV 438
V+ G+ + D++S GV++
Sbjct: 183 -VISGKLYAGPEVDVWSCGVIL 203
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 105/202 (51%), Gaps = 21/202 (10%)
Query: 245 NFSDANKLGQGGFGAVYKGM-LSNGETIAVK-----RLSKNSKQGEIEFKNEVLLLARLQ 298
N+ LG+G FG V + G+ +A+K L+K+ QG IE E+ L L+
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 62
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
H ++++L + E I+V E+ N D+ + R+ M+ ++ + + I + Y
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEY 118
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPE 418
H R +I+HRDLK N+LLD +N KI+DFG++ + D T+ G+ Y APE
Sbjct: 119 CH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTS--CGSPNYAAPE 172
Query: 419 YVMHGRFSV--KSDIFSFGVLV 438
V+ G+ + D++S GV++
Sbjct: 173 -VISGKLYAGPEVDVWSCGVIL 193
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 131/307 (42%), Gaps = 38/307 (12%)
Query: 232 LQFDFETIRVATDNFSDANKLGQGGFGAVYKG------MLSNGETIAVKRLSKNSKQGEI 285
L +D D LG+G FG V + + T+AVK L + + E
Sbjct: 6 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH 65
Query: 286 E-FKNEVLLLARL-QHRNLVRLLGFCLERKERILVY-EFVPNASLDHFI------FDP-- 334
+E+ +L + H N+V LLG C + ++V EF +L ++ F P
Sbjct: 66 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 335 -----INREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISD 389
+ ++ +T E +A+G+ +L + + IHRDL A NILL + KI D
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICD 182
Query: 390 FGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSS 449
FG+AR D + +MAPE + ++++SD++SFGVL+ EI S
Sbjct: 183 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
Query: 450 FGTEEETEDLLTYAWRNWNEGAALNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGM 509
G + + E R EG + D T T EM + + L C S RP
Sbjct: 243 PGVKIDEEFC-----RRLKEGTRMRAPDYT-----TPEMYQTM---LDCWHGEPSQRPTF 289
Query: 510 ASVVNML 516
+ +V L
Sbjct: 290 SELVEHL 296
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 117/234 (50%), Gaps = 38/234 (16%)
Query: 238 TIRVATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFKNEVLLLAR 296
++R A+D F + LGQG FG V K + + A+K++ +++++ +EV+LLA
Sbjct: 1 SLRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLAS 58
Query: 297 LQHRNLVRLLGFCLERKERI-------------LVYEFVPNASLDHFIFDPINREHMTWE 343
L H+ +VR LER+ + + E+ N +L +D I+ E++ +
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL----YDLIHSENLNQQ 114
Query: 344 K--RYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR------- 394
+ +++ I L Y+H IIHRDLK NI +D N KI DFG+A+
Sbjct: 115 RDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 395 LFEMDQ-----THSDTNRVVGTFGYMAPEYV-MHGRFSVKSDIFSFGVLVLEIV 442
+ ++D + + +GT Y+A E + G ++ K D++S G++ E++
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 131/282 (46%), Gaps = 30/282 (10%)
Query: 252 LGQGGFGAV--YKGMLSN---GETIAVKRLSKN-SKQGEIEFKNEVLLLARLQHRNLVRL 305
LG+G FG V Y +N GE +AVK L + Q +K E+ +L L H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 306 LGFCLERKERIL--VYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
G C ++ E+ L V E+VP SL D + R + + + I G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLR----DYLPRHSIGLAQLLLFAQQICEGMAYLHAQ- 136
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLF----EMDQTHSDTNRVVGTFGYMAPEY 419
IHR+L A N+LLD++ KI DFG+A+ E + D + V F Y APE
Sbjct: 137 --HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV--FWY-APEC 191
Query: 420 VMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAALNLMDPT 479
+ +F SD++SFGV + E+++ SS + +L+ A + L L +
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT-HCDSSQSPPTKFLELIGIA---QGQMTVLRLTELL 247
Query: 480 MRGGSTSEMMKC----IHIGLLCVQENVSNRPGMASVVNMLN 517
RG KC H+ C + S RP +++ +L
Sbjct: 248 ERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILK 289
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 108/224 (48%), Gaps = 28/224 (12%)
Query: 244 DNFSDANKLGQGGFGAVY--------KGMLSNGETIAVKRLSKNSKQGEI-EFKNEVLLL 294
D + LG+G FG V K T+AVK L ++ + ++ + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 295 ARL-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI-----------FDPINR---EH 339
+ +H+N++ LLG C + ++ + +L ++ +D INR E
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYD-INRVPEEQ 153
Query: 340 MTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMD 399
MT++ +ARG+ YL + + IHRDL A N+L+ KI+DFG+AR
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 400 QTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ T +MAPE + ++ +SD++SFGVL+ EI +
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 17/199 (8%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIE-FKNEVLLLARLQHRNLVRLL-GF 308
+LG G FG VYK +A ++ + E+E + E+ +LA H N+V+LL F
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKII-EGIARGLLYLHEDSRLRI 367
E IL+ EF ++D + + E E + +++ + L YLH++ +I
Sbjct: 104 YYENNLWILI-EFCAGGAVDAVMLE---LERPLTESQIQVVCKQTLDALNYLHDN---KI 156
Query: 368 IHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVM-----H 422
IHRDLKA NIL + + K++DFG++ + +T + +GT +MAPE VM
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSA--KNTRTIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 423 GRFSVKSDIFSFGVLVLEI 441
+ K+D++S G+ ++E+
Sbjct: 215 RPYDYKADVWSLGITLIEM 233
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 19/212 (8%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS-KNSKQG-EIEFKNEVLLLARL 297
+AT + ++G G +G VYK +G +A+K + N ++G I EV LL RL
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 298 Q---HRNLVRLLGFC-LERKER----ILVYEFVPNASLDHFIFDPINREHMTWEKRYKII 349
+ H N+VRL+ C R +R LV+E V + L ++ D + E ++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLM 118
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVV 409
RGL +LH + I+HRDLK NIL+ S K++DFG+AR++ VV
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA---LFPVV 172
Query: 410 GTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEI 441
T Y APE ++ ++ D++S G + E+
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P + ++ + + E+R I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 121
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLD 171
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P + ++ + + E+R I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 121
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTELCGTLD 171
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P + ++ + + E+R I +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 124
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLD 174
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 131/308 (42%), Gaps = 38/308 (12%)
Query: 232 LQFDFETIRVATDNFSDANKLGQGGFGAVYKG------MLSNGETIAVKRLSKNSKQGEI 285
L +D D LG+G FG V + + T+AVK L + + E
Sbjct: 52 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH 111
Query: 286 E-FKNEVLLLARL-QHRNLVRLLGFCLERKERILV-YEFVPNASLDHFI------FDP-- 334
+E+ +L + H N+V LLG C + ++V EF +L ++ F P
Sbjct: 112 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 171
Query: 335 -----INREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISD 389
+ ++ +T E +A+G+ +L + + IHRDL A NILL + KI D
Sbjct: 172 VAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICD 228
Query: 390 FGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSS 449
FG+AR D + +MAPE + ++++SD++SFGVL+ EI S
Sbjct: 229 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 288
Query: 450 FGTEEETEDLLTYAWRNWNEGAALNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGM 509
G + + E R EG + D T T EM + + L C S RP
Sbjct: 289 PGVKIDEEFC-----RRLKEGTRMRAPDYT-----TPEMYQTM---LDCWHGEPSQRPTF 335
Query: 510 ASVVNMLN 517
+ +V L
Sbjct: 336 SELVEHLG 343
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P + ++ + + E+R I +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 126
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLD 176
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 177 YLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P + ++ + + E+R I +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 126
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLD 176
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P + ++ + + E+R I +A L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 123
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT
Sbjct: 124 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLD 173
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 174 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 216
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P + ++ + + E+R I +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 124
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLD 174
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 20/201 (9%)
Query: 252 LGQGGFGAVYK--GMLSNGETIAVKRLSKNSKQGE--IEFKNEVLLLARLQHRNLVRLLG 307
LG+G FG V K ++ E AVK ++K S + + EV LL +L H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQE-YAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 308 FCLERKERILVYEFVPNASLDHFIFDPI-NREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
+ +V E L FD I R+ + +II+ + G+ Y+H+ +
Sbjct: 89 ILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN--- 141
Query: 367 IIHRDLKASNILLDS---EMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHG 423
I+HRDLK NILL+S + + KI DFG++ F+ + D +GT Y+APE V+ G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---IGTAYYIAPE-VLRG 197
Query: 424 RFSVKSDIFSFGVLVLEIVSG 444
+ K D++S GV++ ++SG
Sbjct: 198 TYDEKCDVWSAGVILYILLSG 218
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P + ++ + + E+R I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 121
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLD 171
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS-KNSKQGEIEFKNEVLLLARLQHR 300
+++ LG+G +G V + E +AVK + K + K E+ + A L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINRE-HMTWEKRYKIIEGIARGLLYL 359
N+V+ G E + L E+ L FD I + M + + G++YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H + I HRD+K N+LLD N KISDFG+A +F + N++ GT Y+APE
Sbjct: 122 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 420 VMHGRFSVKS-DIFSFGVLVLEIVSGQ 445
+ F + D++S G+++ +++G+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P + ++ + + E+R I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 121
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLD 171
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 117/234 (50%), Gaps = 38/234 (16%)
Query: 238 TIRVATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFKNEVLLLAR 296
++R A+D F + LGQG FG V K + + A+K++ +++++ +EV+LLA
Sbjct: 1 SLRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLAS 58
Query: 297 LQHRNLVRLLGFCLERKERI-------------LVYEFVPNASLDHFIFDPINREHMTWE 343
L H+ +VR LER+ + + E+ N +L +D I+ E++ +
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTL----YDLIHSENLNQQ 114
Query: 344 K--RYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR------- 394
+ +++ I L Y+H IIHRDLK NI +D N KI DFG+A+
Sbjct: 115 RDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 395 LFEMDQ-----THSDTNRVVGTFGYMAPEYV-MHGRFSVKSDIFSFGVLVLEIV 442
+ ++D + + +GT Y+A E + G ++ K D++S G++ E++
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P + ++ + + E+R I +A L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 122
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT
Sbjct: 123 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDTLCGTLD 172
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P + ++ + + E+R I +A L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 122
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT
Sbjct: 123 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLD 172
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 106/212 (50%), Gaps = 20/212 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKG--MLSNGETIAVKRLSKNSKQGEIEFKN--EVLLLARL 297
A + ++G+G +G V+K + + G +A+KR+ + + + EV +L L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 298 Q---HRNLVRLLGFC-LERKER----ILVYEFVPNASLDHFIFDPINREHMTWEKRYKII 349
+ H N+VRL C + R +R LV+E V + L ++ D + + E ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMM 126
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVV 409
+ RGL +LH R++HRDLK NIL+ S K++DFG+AR++ VV
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVV 180
Query: 410 GTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEI 441
T Y APE ++ ++ D++S G + E+
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P + ++ + + E+R I +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 126
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLD 176
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 20/201 (9%)
Query: 252 LGQGGFGAVYK--GMLSNGETIAVKRLSKNSKQGE--IEFKNEVLLLARLQHRNLVRLLG 307
LG+G FG V K ++ E AVK ++K S + + EV LL +L H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQE-YAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 308 FCLERKERILVYEFVPNASLDHFIFDPI-NREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
+ +V E L FD I R+ + +II+ + G+ Y+H+ +
Sbjct: 89 ILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN--- 141
Query: 367 IIHRDLKASNILLDS---EMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHG 423
I+HRDLK NILL+S + + KI DFG++ F+ + D +GT Y+APE V+ G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---IGTAYYIAPE-VLRG 197
Query: 424 RFSVKSDIFSFGVLVLEIVSG 444
+ K D++S GV++ ++SG
Sbjct: 198 TYDEKCDVWSAGVILYILLSG 218
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P + ++ + + E+R I +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 124
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGTLD 174
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P + ++ + + E+R I +A L
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 120
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT
Sbjct: 121 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLD 170
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 171 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 213
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 20/201 (9%)
Query: 252 LGQGGFGAVYK--GMLSNGETIAVKRLSKNSKQGE--IEFKNEVLLLARLQHRNLVRLLG 307
LG+G FG V K ++ E AVK ++K S + + EV LL +L H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQE-YAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 308 FCLERKERILVYEFVPNASLDHFIFDPI-NREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
+ +V E L FD I R+ + +II+ + G+ Y+H+ +
Sbjct: 89 ILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN--- 141
Query: 367 IIHRDLKASNILLDS---EMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHG 423
I+HRDLK NILL+S + + KI DFG++ F+ + D +GT Y+APE V+ G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---IGTAYYIAPE-VLRG 197
Query: 424 RFSVKSDIFSFGVLVLEIVSG 444
+ K D++S GV++ ++SG
Sbjct: 198 TYDEKCDVWSAGVILYILLSG 218
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P + ++ + + E+R I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 121
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLD 171
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 108/224 (48%), Gaps = 28/224 (12%)
Query: 244 DNFSDANKLGQGGFGAVY--------KGMLSNGETIAVKRLSKNSKQGEI-EFKNEVLLL 294
D + LG+G FG V K T+AVK L ++ + ++ + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 295 ARL-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI-----------FDPINR---EH 339
+ +H+N++ LLG C + ++ + +L ++ +D INR E
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYD-INRVPEEQ 153
Query: 340 MTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMD 399
MT++ +ARG+ YL + + IHRDL A N+L+ KI+DFG+AR
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 400 QTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ T +MAPE + ++ +SD++SFGVL+ EI +
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P + ++ + + E+R I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 121
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTXLCGTLD 171
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 130/307 (42%), Gaps = 38/307 (12%)
Query: 232 LQFDFETIRVATDNFSDANKLGQGGFGAVYKG------MLSNGETIAVKRLSKNSKQGEI 285
L +D D LG+G FG V + + T+AVK L + + E
Sbjct: 15 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH 74
Query: 286 E-FKNEVLLLARL-QHRNLVRLLGFCLERKERILV-YEFVPNASLDHFI------FDP-- 334
+E+ +L + H N+V LLG C + ++V EF +L ++ F P
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 335 -----INREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISD 389
+ ++ +T E +A+G+ +L + + IHRDL A NILL + KI D
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICD 191
Query: 390 FGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSS 449
FG+AR D +MAPE + ++++SD++SFGVL+ EI S
Sbjct: 192 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
Query: 450 FGTEEETEDLLTYAWRNWNEGAALNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGM 509
G + + E R EG + D T T EM + + L C S RP
Sbjct: 252 PGVKIDEEFC-----RRLKEGTRMRAPDYT-----TPEMYQTM---LDCWHGEPSQRPTF 298
Query: 510 ASVVNML 516
+ +V L
Sbjct: 299 SELVEHL 305
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P + ++ + + E+R I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 121
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLD 171
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P + ++ + + E+R I +A L
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 125
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT
Sbjct: 126 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLD 175
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 218
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 107/223 (47%), Gaps = 32/223 (14%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLV 303
DN +G+G +GAVYKG L + +AVK S ++Q I KN + + ++H N+
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKN-IYRVPLMEHDNIA 70
Query: 304 RLLG-----FCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
R + R E +LV E+ PN SL ++ + W ++ + RGL Y
Sbjct: 71 RFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSCRLAHSVTRGLAY 126
Query: 359 LH------EDSRLRIIHRDLKASNILLDSEMNPKISDFGMA------RLFEMDQTHSDTN 406
LH + + I HRDL + N+L+ ++ ISDFG++ RL + +
Sbjct: 127 LHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAI 186
Query: 407 RVVGTFGYMAPEYVMHGRFSVKS--------DIFSFGVLVLEI 441
VGT YMAPE V+ G +++ D+++ G++ EI
Sbjct: 187 SEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 130/307 (42%), Gaps = 38/307 (12%)
Query: 232 LQFDFETIRVATDNFSDANKLGQGGFGAVYKG------MLSNGETIAVKRLSKNSKQGEI 285
L +D D LG+G FG V + + T+AVK L + + E
Sbjct: 15 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH 74
Query: 286 E-FKNEVLLLARL-QHRNLVRLLGFCLERKERILV-YEFVPNASLDHFI------FDP-- 334
+E+ +L + H N+V LLG C + ++V EF +L ++ F P
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 335 -----INREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISD 389
+ ++ +T E +A+G+ +L + + IHRDL A NILL + KI D
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICD 191
Query: 390 FGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSS 449
FG+AR D +MAPE + ++++SD++SFGVL+ EI S
Sbjct: 192 FGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
Query: 450 FGTEEETEDLLTYAWRNWNEGAALNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGM 509
G + + E R EG + D T T EM + + L C S RP
Sbjct: 252 PGVKIDEEFC-----RRLKEGTRMRAPDYT-----TPEMYQTM---LDCWHGEPSQRPTF 298
Query: 510 ASVVNML 516
+ +V L
Sbjct: 299 SELVEHL 305
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 106/212 (50%), Gaps = 20/212 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKG--MLSNGETIAVKRLSKNSKQGEIEFKN--EVLLLARL 297
A + ++G+G +G V+K + + G +A+KR+ + + + EV +L L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 298 Q---HRNLVRLLGFC-LERKER----ILVYEFVPNASLDHFIFDPINREHMTWEKRYKII 349
+ H N+VRL C + R +R LV+E V + L ++ D + + E ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMM 126
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVV 409
+ RGL +LH R++HRDLK NIL+ S K++DFG+AR++ VV
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVV 180
Query: 410 GTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEI 441
T Y APE ++ ++ D++S G + E+
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 34/215 (15%)
Query: 252 LGQGGFGAVYKGMLSNG---ETIAVKRLSK-NSKQGEIEFKNEVLLLARLQHR-NLVRLL 306
+G+G FG V K + A+KR+ + SK +F E+ +L +L H N++ LL
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 307 GFCLERKERILVYEFVPNASLDHFI-------FDPI------NREHMTWEKRYKIIEGIA 353
G C R L E+ P+ +L F+ DP ++ ++ +A
Sbjct: 90 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 149
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
RG+ YL S+ + IHR+L A NIL+ KI+DFG++R E+ V T G
Sbjct: 150 RGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEV--------YVKKTMG 198
Query: 414 -----YMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+MA E + + ++ SD++S+GVL+ EIVS
Sbjct: 199 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 106/212 (50%), Gaps = 20/212 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKG--MLSNGETIAVKRLSKNSKQGEIEFKN--EVLLLARL 297
A + ++G+G +G V+K + + G +A+KR+ + + + EV +L L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 298 Q---HRNLVRLLGFC-LERKER----ILVYEFVPNASLDHFIFDPINREHMTWEKRYKII 349
+ H N+VRL C + R +R LV+E V + L ++ D + + E ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMM 126
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVV 409
+ RGL +LH R++HRDLK NIL+ S K++DFG+AR++ VV
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVV 180
Query: 410 GTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEI 441
T Y APE ++ ++ D++S G + E+
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P + ++ + + E+R I +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 124
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLD 174
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P + ++ + + E+R I +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 124
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLD 174
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY N + I A+K L K K G E + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P + ++ + + E+R I +A L
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 121
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H ++IHRD+K N+LL S KI+DFG + H+ ++R + GT
Sbjct: 122 SYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLD 171
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T ++T
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDT 214
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 37/230 (16%)
Query: 245 NFSDANKLGQGGFGAVYKGML------SNGETIAVKRLSKNSKQGEI-EFKNEVLLLARL 297
N LG+G FG V K + T+AVK L +N+ E+ + +E +L ++
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI---------------------FDPIN 336
H ++++L G C + +L+ E+ SL F+ D +
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 337 REHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-L 395
+T I++G+ YL E ++++HRDL A NIL+ KISDFG++R +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 396 FEMDQTHSDTNRVVGTF--GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+E D S R G +MA E + ++ +SD++SFGVL+ EIV+
Sbjct: 201 YEED---SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P + ++ + + E+R I +A L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 122
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT
Sbjct: 123 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------CHAPSSRRTTLSGTLD 172
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 102/199 (51%), Gaps = 17/199 (8%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIE-FKNEVLLLARLQHRNLVRLL-GF 308
+LG G FG VYK +A ++ + E+E + E+ +LA H N+V+LL F
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKII-EGIARGLLYLHEDSRLRI 367
E IL+ EF ++D + + E E + +++ + L YLH++ +I
Sbjct: 104 YYENNLWILI-EFCAGGAVDAVMLE---LERPLTESQIQVVCKQTLDALNYLHDN---KI 156
Query: 368 IHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVM-----H 422
IHRDLKA NIL + + K++DFG++ D+ +GT +MAPE VM
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDS--FIGTPYWMAPEVVMCETSKD 214
Query: 423 GRFSVKSDIFSFGVLVLEI 441
+ K+D++S G+ ++E+
Sbjct: 215 RPYDYKADVWSLGITLIEM 233
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 110/221 (49%), Gaps = 13/221 (5%)
Query: 224 VEETIAKSLQFDFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQG 283
+E T+A +F + +G+G FG V G G +AVK + KN
Sbjct: 173 MEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCI-KNDATA 230
Query: 284 EIEFKNEVLLLARLQHRNLVRLLGFCLERKERI-LVYEFVPNASLDHFIFDPINREHMTW 342
+ F E ++ +L+H NLV+LLG +E K + +V E++ SL ++ R +
Sbjct: 231 Q-AFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR-GRSVLGG 288
Query: 343 EKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTH 402
+ K + + YL ++ +HRDL A N+L+ + K+SDFG+ + E T
Sbjct: 289 DCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQ 343
Query: 403 SDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
DT ++ + APE + +FS KSD++SFG+L+ EI S
Sbjct: 344 -DTGKL--PVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNS--KQGEIEF-KNEVLLLARLQH 299
++F LG+G F V L+ A+K L K K+ ++ + E +++RL H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 300 RNLVRLLGFCLERKERILV-YEFVPNASLDHFI-----FDPINREHMTWEKRYKIIEGIA 353
V+L FC + E++ + N L +I FD T E I
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 147
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
L YLH IIHRDLK NILL+ +M+ +I+DFG A++ + + N VGT
Sbjct: 148 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 204
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + SD+++ G ++ ++V+G
Sbjct: 205 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 22/213 (10%)
Query: 240 RVATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLA 295
+ D+F LG+G FG VY + I A+K L K+ K+G E + + E+ + +
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 70
Query: 296 RLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKR-YKIIEGIAR 354
L+H N++R+ + +RK L+ EF P L + + + E+R +E +A
Sbjct: 71 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL----YKELQKHGRFDEQRSATFMEELAD 126
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGT 411
L Y HE ++IHRD+K N+L+ + KI+DFG + H+ + R + GT
Sbjct: 127 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGT 176
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y+ PE + K D++ GVL E + G
Sbjct: 177 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS-KNSKQGEIEFKNEVLLLARLQHR 300
+++ LG+G +G V + E +AVK + K + K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINRE-HMTWEKRYKIIEGIARGLLYL 359
N+V+ G E + L E+ L FD I + M + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H + I HRD+K N+LLD N KISDFG+A +F + N++ GT Y+APE
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 420 VMHGRFSVKS-DIFSFGVLVLEIVSGQ 445
+ F + D++S G+++ +++G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 108/213 (50%), Gaps = 17/213 (7%)
Query: 240 RVATDNFSDANKLGQGGFGAVY--KGMLSNGETIAVKRL---SKNSKQGEIEFKNEVLLL 294
++ + + +KLG GG VY + + N + +A+K + + ++ F+ EV
Sbjct: 7 KIINERYKIVDKLGGGGMSTVYLAEDTILNIK-VAIKAIFIPPREKEETLKRFEREVHNS 65
Query: 295 ARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREH--MTWEKRYKIIEGI 352
++L H+N+V ++ E LV E++ +L +I H ++ + I
Sbjct: 66 SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI-----ESHGPLSVDTAINFTNQI 120
Query: 353 ARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF 412
G+ + H+ +RI+HRD+K NIL+DS KI DFG+A+ + + + TN V+GT
Sbjct: 121 LDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS-ETSLTQTNHVLGTV 176
Query: 413 GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
Y +PE +DI+S G+++ E++ G+
Sbjct: 177 QYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 22/213 (10%)
Query: 240 RVATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLA 295
+ D+F LG+G FG VY + I A+K L K+ K+G E + + E+ + +
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 296 RLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKR-YKIIEGIAR 354
L+H N++R+ + +RK L+ EF P L + + + E+R +E +A
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL----YKELQKHGRFDEQRSATFMEELAD 125
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGT 411
L Y HE ++IHRD+K N+L+ + KI+DFG + H+ + R + GT
Sbjct: 126 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGT 175
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y+ PE + K D++ GVL E + G
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 22/213 (10%)
Query: 240 RVATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLA 295
+ D+F LG+G FG VY + I A+K L K+ K+G E + + E+ + +
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 296 RLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKR-YKIIEGIAR 354
L+H N++R+ + +RK L+ EF P L + + + E+R +E +A
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL----YKELQKHGRFDEQRSATFMEELAD 125
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGT 411
L Y HE ++IHRD+K N+L+ + KI+DFG + H+ + R + GT
Sbjct: 126 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGT 175
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y+ PE + K D++ GVL E + G
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS-KNSKQGEIEFKNEVLLLARLQHR 300
+++ LG+G +G V + E +AVK + K + K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINRE-HMTWEKRYKIIEGIARGLLYL 359
N+V+ G E + L E+ L FD I + M + + G++YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H + I HRD+K N+LLD N KISDFG+A +F + N++ GT Y+APE
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 420 VMHGRFSVKS-DIFSFGVLVLEIVSGQ 445
+ F + D++S G+++ +++G+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 31/227 (13%)
Query: 245 NFSDANKLGQGGFGAVYKGML------SNGETIAVKRLSKNSKQGEI-EFKNEVLLLARL 297
N LG+G FG V K + T+AVK L +N+ E+ + +E +L ++
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI---------------------FDPIN 336
H ++++L G C + +L+ E+ SL F+ D +
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 337 REHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF 396
+T I++G+ YL E ++++HRDL A NIL+ KISDFG++R
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 397 EMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ ++ ++ +MA E + ++ +SD++SFGVL+ EIV+
Sbjct: 201 YEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P + ++ + + E+R I +A L
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 118
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT
Sbjct: 119 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLD 168
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 169 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 211
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 21/204 (10%)
Query: 252 LGQGGFGAVYKG----MLSNGETIAVKRLSKNSKQGEIE-FKNEVLLLARLQHRNLVRLL 306
+G+G FG VY G N A+K LS+ ++ ++E F E LL+ L H N++ L+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 307 GFCL--ERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
G L E +L+ ++ + L FI P + + T + +ARG+ YL E
Sbjct: 89 GIMLPPEGLPHVLL-PYMCHGDLLQFIRSP--QRNPTVKDLISFGLQVARGMEYLAEQ-- 143
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMA-----RLFEMDQTHSDTNRVVGTFGYMAPEY 419
+ +HRDL A N +LD K++DFG+A R + Q H V + A E
Sbjct: 144 -KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPV---KWTALES 199
Query: 420 VMHGRFSVKSDIFSFGVLVLEIVS 443
+ RF+ KSD++SFGVL+ E+++
Sbjct: 200 LQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS-KNSKQGEIEFKNEVLLLARLQHR 300
+++ LG+G +G V + E +AVK + K + K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINRE-HMTWEKRYKIIEGIARGLLYL 359
N+V+ G E + L E+ L FD I + M + + G++YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H + I HRD+K N+LLD N KISDFG+A +F + N++ GT Y+APE
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 420 VMHGRFSVKS-DIFSFGVLVLEIVSGQ 445
+ F + D++S G+++ +++G+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS-KNSKQGEIEFKNEVLLLARLQHR 300
+++ LG+G +G V + E +AVK + K + K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINRE-HMTWEKRYKIIEGIARGLLYL 359
N+V+ G E + L E+ L FD I + M + + G++YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H + I HRD+K N+LLD N KISDFG+A +F + N++ GT Y+APE
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 420 VMHGRFSVKS-DIFSFGVLVLEIVSGQ 445
+ F + D++S G+++ +++G+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS-KNSKQGEIEFKNEVLLLARLQHR 300
+++ LG+G +G V + E +AVK + K + K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINRE-HMTWEKRYKIIEGIARGLLYL 359
N+V+ G E + L E+ L FD I + M + + G++YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H + I HRD+K N+LLD N KISDFG+A +F + N++ GT Y+APE
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 420 VMHGRFSVKS-DIFSFGVLVLEIVSGQ 445
+ F + D++S G+++ +++G+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS-KNSKQGEIEFKNEVLLLARLQHR 300
+++ LG+G +G V + E +AVK + K + K E+ + L H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINRE-HMTWEKRYKIIEGIARGLLYL 359
N+V+ G E + L E+ L FD I + M + + G++YL
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 119
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H + I HRD+K N+LLD N KISDFG+A +F + N++ GT Y+APE
Sbjct: 120 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 176
Query: 420 VMHGRFSVKS-DIFSFGVLVLEIVSGQ 445
+ F + D++S G+++ +++G+
Sbjct: 177 LKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 129/282 (45%), Gaps = 30/282 (10%)
Query: 252 LGQGGFGAV--YKGMLSN---GETIAVKRLSKNS-KQGEIEFKNEVLLLARLQHRNLVRL 305
LG+G FG V Y +N GE +AVK L ++ Q +K E+ +L L H ++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 306 LGFCLER--KERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
G C + LV E+VP SL D + R + + + I G+ YLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLR----DYLPRHSIGLAQLLLFAQQICEGMAYLHAQ- 153
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLF----EMDQTHSDTNRVVGTFGYMAPEY 419
IHRDL A N+LLD++ KI DFG+A+ E + D + V F Y APE
Sbjct: 154 --HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPV--FWY-APEC 208
Query: 420 VMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAALNLMDPT 479
+ +F SD++SFGV + E+++ SS + +L+ A + L L +
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLT-HCDSSQSPPTKFLELIGIA---QGQMTVLRLTELL 264
Query: 480 MRGGSTSEMMKC----IHIGLLCVQENVSNRPGMASVVNMLN 517
RG KC H+ C + S RP +++ +L
Sbjct: 265 ERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILK 306
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 22/230 (9%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNS--KQG-EIEFKNE 290
D T D+F LG+G FG VY +A+K L K+ K+G E + + E
Sbjct: 14 DILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRRE 73
Query: 291 VLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYK-II 349
+ + A L H N++RL + +R+ L+ E+ P L + + + E+R I+
Sbjct: 74 IEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGEL----YKELQKSCTFDEQRTATIM 129
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR-- 407
E +A L+Y H ++IHRD+K N+LL + KI+DFG + H+ + R
Sbjct: 130 EELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWS-------VHAPSLRRK 179
Query: 408 -VVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
+ GT Y+ PE + + K D++ GVL E++ G + ET
Sbjct: 180 TMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNET 229
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 17/199 (8%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIE-FKNEVLLLARLQHRNLVRLL-GF 308
+LG G FG VYK +A ++ + E+E + E+ +LA H N+V+LL F
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKII-EGIARGLLYLHEDSRLRI 367
E IL+ EF ++D + + E E + +++ + L YLH++ +I
Sbjct: 104 YYENNLWILI-EFCAGGAVDAVMLE---LERPLTESQIQVVCKQTLDALNYLHDN---KI 156
Query: 368 IHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVM-----H 422
IHRDLKA NIL + + K++DFG++ + + + +GT +MAPE VM
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDXFIGTPYWMAPEVVMCETSKD 214
Query: 423 GRFSVKSDIFSFGVLVLEI 441
+ K+D++S G+ ++E+
Sbjct: 215 RPYDYKADVWSLGITLIEM 233
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS-KNSKQGEIEFKNEVLLLARLQHR 300
+++ LG+G +G V + E +AVK + K + K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINRE-HMTWEKRYKIIEGIARGLLYL 359
N+V+ G E + L E+ L FD I + M + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H + I HRD+K N+LLD N KISDFG+A +F + N++ GT Y+APE
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 420 VMHGRFSVKS-DIFSFGVLVLEIVSGQ 445
+ F + D++S G+++ +++G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS-KNSKQGEIEFKNEVLLLARLQHR 300
+++ LG+G +G V + E +AVK + K + K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINRE-HMTWEKRYKIIEGIARGLLYL 359
N+V+ G E + L E+ L FD I + M + + G++YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H + I HRD+K N+LLD N KISDFG+A +F + N++ GT Y+APE
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 420 VMHGRFSVKS-DIFSFGVLVLEIVSGQ 445
+ F + D++S G+++ +++G+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS-KNSKQGEIEFKNEVLLLARLQHR 300
+++ LG+G +G V + E +AVK + K + K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINRE-HMTWEKRYKIIEGIARGLLYL 359
N+V+ G E + L E+ L FD I + M + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H + I HRD+K N+LLD N KISDFG+A +F + N++ GT Y+APE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 420 VMHGRFSVKS-DIFSFGVLVLEIVSGQ 445
+ F + D++S G+++ +++G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P + ++ + + E+R I +A L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 123
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI++FG + H+ ++R + GT
Sbjct: 124 SYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS-------VHAPSSRRTTLCGTLD 173
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 174 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 216
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS-KNSKQGEIEFKNEVLLLARLQHR 300
+++ LG+G +G V + E +AVK + K + K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINRE-HMTWEKRYKIIEGIARGLLYL 359
N+V+ G E + L E+ L FD I + M + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H + I HRD+K N+LLD N KISDFG+A +F + N++ GT Y+APE
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 420 VMHGRFSVKS-DIFSFGVLVLEIVSGQ 445
+ F + D++S G+++ +++G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS-KNSKQGEIEFKNEVLLLARLQHR 300
+++ LG+G +G V + E +AVK + K + K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINRE-HMTWEKRYKIIEGIARGLLYL 359
N+V+ G E + L E+ L FD I + M + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H + I HRD+K N+LLD N KISDFG+A +F + N++ GT Y+APE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 420 VMHGRFSVKS-DIFSFGVLVLEIVSGQ 445
+ F + D++S G+++ +++G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 108/233 (46%), Gaps = 24/233 (10%)
Query: 241 VATDNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQGEIEFKNEVLLL 294
+AT + ++G G +G VYK G +++ V I EV LL
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 295 ARLQ---HRNLVRLLGFC-LERKER----ILVYEFVPNASLDHFIFDPINREHMTWEKRY 346
RL+ H N+VRL+ C R +R LV+E V + L ++ D + E
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIK 123
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
++ RGL +LH + I+HRDLK NIL+ S K++DFG+AR++ +
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTP-- 178
Query: 407 RVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDL 459
VV T Y APE ++ ++ D++S G + E+ +++ F E + L
Sbjct: 179 -VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSEADQL 228
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS-KNSKQGEIEFKNEVLLLARLQHR 300
+++ LG+G +G V + E +AVK + K + K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINRE-HMTWEKRYKIIEGIARGLLYL 359
N+V+ G E + L E+ L FD I + M + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H + I HRD+K N+LLD N KISDFG+A +F + N++ GT Y+APE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 420 VMHGRFSVKS-DIFSFGVLVLEIVSGQ 445
+ F + D++S G+++ +++G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS-KNSKQGEIEFKNEVLLLARLQHR 300
+++ LG+G +G V + E +AVK + K + K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINRE-HMTWEKRYKIIEGIARGLLYL 359
N+V+ G E + L E+ L FD I + M + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H + I HRD+K N+LLD N KISDFG+A +F + N++ GT Y+APE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 420 VMHGRFSVKS-DIFSFGVLVLEIVSGQ 445
+ F + D++S G+++ +++G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 108/230 (46%), Gaps = 37/230 (16%)
Query: 245 NFSDANKLGQGGFGAVYKGML------SNGETIAVKRLSKNSKQGEI-EFKNEVLLLARL 297
N LG+G FG V K + T+AVK L +N+ E+ + +E +L ++
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI---------------------FDPIN 336
H ++++L G C + +L+ E+ SL F+ D +
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 337 REHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-L 395
+T I++G+ YL E S ++HRDL A NIL+ KISDFG++R +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 396 FEMDQTHSDTNRVVGTF--GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+E D S R G +MA E + ++ +SD++SFGVL+ EIV+
Sbjct: 201 YEED---SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS-KNSKQGEIEFKNEVLLLARLQHR 300
+++ LG+G +G V + E +AVK + K + K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINRE-HMTWEKRYKIIEGIARGLLYL 359
N+V+ G E + L E+ L FD I + M + + G++YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H + I HRD+K N+LLD N KISDFG+A +F + N++ GT Y+APE
Sbjct: 122 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 420 VMHGRFSVKS-DIFSFGVLVLEIVSGQ 445
+ F + D++S G+++ +++G+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS-KNSKQGEIEFKNEVLLLARLQHR 300
+++ LG+G +G V + E +AVK + K + K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINRE-HMTWEKRYKIIEGIARGLLYL 359
N+V+ G E + L E+ L FD I + M + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H + I HRD+K N+LLD N KISDFG+A +F + N++ GT Y+APE
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 420 VMHGRFSVKS-DIFSFGVLVLEIVSGQ 445
+ F + D++S G+++ +++G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 116/225 (51%), Gaps = 42/225 (18%)
Query: 251 KLGQGGFGAVYKGM-LSNGETIAVKRLS---KNSKQGEIEFKNEVLLLARLQ-HRNLVRL 305
KLG+G +G V+K + GE +AVK++ +NS + F+ E+++L L H N+V L
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNL 74
Query: 306 LGFCLERKER--ILVYEFVP---NASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLH 360
L +R LV++++ +A + I +P++++++ Y++I+ I YLH
Sbjct: 75 LNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVV----YQLIKVIK----YLH 126
Query: 361 EDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLF-------------------EMDQT 401
++HRD+K SNILL++E + K++DFG++R F D
Sbjct: 127 SGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDD 183
Query: 402 HSDTNRVVGTFGYMAPEYVM-HGRFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE ++ +++ D++S G ++ EI+ G+
Sbjct: 184 QPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 121/231 (52%), Gaps = 22/231 (9%)
Query: 246 FSDANKLGQGGFGAVYKG-MLSNGETIAVKR-LSKNSKQG-EIEFKNEVLLLARLQHRNL 302
+ K+GQG FG V+K G+ +A+K+ L +N K+G I E+ +L L+H N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 303 VRLLGFCLER-------KERI-LVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIAR 354
V L+ C + K I LV++F + L + + + + ++ KR +++ +
Sbjct: 80 VNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLN 136
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEM---DQTHSDTNRVVGT 411
GL Y+H R +I+HRD+KA+N+L+ + K++DFG+AR F + Q + NRVV T
Sbjct: 137 GLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-T 192
Query: 412 FGYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLT 461
Y PE ++ R + D++ G ++ E+ + TE+ L++
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 243
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS-KNSKQGEIEFKNEVLLLARLQHR 300
+++ LG+G +G V + E +AVK + K + K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINRE-HMTWEKRYKIIEGIARGLLYL 359
N+V+ G E + L E+ L FD I + M + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H + I HRD+K N+LLD N KISDFG+A +F + N++ GT Y+APE
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 420 VMHGRFSVKS-DIFSFGVLVLEIVSGQ 445
+ F + D++S G+++ +++G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 108/233 (46%), Gaps = 41/233 (17%)
Query: 244 DNFSDANKLGQGGFGAVYK----GMLSNGETI--AVKRLSKNSKQGEIE-FKNEVLLLAR 296
+N LG G FG V G+ G +I AVK L + + E E +E+ ++ +
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 297 L-QHRNLVRLLGFCLERKERILVYEFVPNASL--------DHFIFDPINREH-------- 339
L H N+V LLG C L++E+ L + F D I E+
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 340 ----MTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARL 395
+T+E +A+G+ +L S +HRDL A N+L+ KI DFG+AR
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLAR- 220
Query: 396 FEMDQTHSDTNRVVGT-----FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
SD+N VV +MAPE + G +++KSD++S+G+L+ EI S
Sbjct: 221 ----DIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 120/246 (48%), Gaps = 30/246 (12%)
Query: 243 TDNFSDANKLGQGGFGAVY--KGMLSNGE-TIAVKRLSKNSKQGEIEFKNEVLLLARLQH 299
++ + KLG G +G V + +++ E I + R + S + EV +L L H
Sbjct: 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95
Query: 300 RNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPI-NREHMTWEKRYKIIEGIARGLLY 358
N+++L F +++ LV E L FD I +R II+ + G+ Y
Sbjct: 96 PNIMKLYDFFEDKRNYYLVMECYKGGEL----FDEIIHRMKFNEVDAAVIIKQVLSGVTY 151
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNP---KISDFGMARLFEMDQTHSDTNRVVGTFGYM 415
LH+ + I+HRDLK N+LL+S+ KI DFG++ +FE +GT Y+
Sbjct: 152 LHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE---NQKKMKERLGTAYYI 205
Query: 416 APEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDL-------LTY---AWR 465
APE V+ ++ K D++S GV++ +++G FG + + E L T+ W+
Sbjct: 206 APE-VLRKKYDEKCDVWSIGVILFILLAG--YPPFGGQTDQEILRKVEKGKYTFDSPEWK 262
Query: 466 NWNEGA 471
N +EGA
Sbjct: 263 NVSEGA 268
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 118/226 (52%), Gaps = 22/226 (9%)
Query: 251 KLGQGGFGAVYKG-MLSNGETIAVKR-LSKNSKQG-EIEFKNEVLLLARLQHRNLVRLLG 307
K+GQG FG V+K G+ +A+K+ L +N K+G I E+ +L L+H N+V L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 308 FCLERKERI--------LVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYL 359
C + LV++F + L + + + + ++ KR +++ + GL Y+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLNGLYYI 141
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEM---DQTHSDTNRVVGTFGYMA 416
H R +I+HRD+KA+N+L+ + K++DFG+AR F + Q + NRVV T Y
Sbjct: 142 H---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRP 197
Query: 417 PEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLT 461
PE ++ R + D++ G ++ E+ + TE+ L++
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 243
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 13/193 (6%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCLE 311
+G+G FG V G G +AVK + KN + F E ++ +L+H NLV+LLG +E
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCI-KNDATAQ-AFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 312 RKERI-LVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHR 370
K + +V E++ SL ++ R + + K + + YL ++ +HR
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 141
Query: 371 DLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSD 430
DL A N+L+ + K+SDFG+ + E T DT ++ + APE + +FS KSD
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTK--EASSTQ-DTGKL--PVKWTAPEALREKKFSTKSD 196
Query: 431 IFSFGVLVLEIVS 443
++SFG+L+ EI S
Sbjct: 197 VWSFGILLWEIYS 209
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS-KNSKQGEIEFKNEVLLLARLQHR 300
+++ LG+G +G V + E +AVK + K + K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINRE-HMTWEKRYKIIEGIARGLLYL 359
N+V+ G E + L E+ L FD I + M + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H + I HRD+K N+LLD N KISDFG+A +F + N++ GT Y+APE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 420 VMHGRFSVKS-DIFSFGVLVLEIVSGQ 445
+ F + D++S G+++ +++G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS-KNSKQGEIEFKNEVLLLARLQHR 300
+++ LG+G +G V + E +AVK + K + K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINRE-HMTWEKRYKIIEGIARGLLYL 359
N+V+ G E + L E+ L FD I + M + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H + I HRD+K N+LLD N KISDFG+A +F + N++ GT Y+APE
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 420 VMHGRFSVKS-DIFSFGVLVLEIVSGQ 445
+ F + D++S G+++ +++G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS-KNSKQGEIEFKNEVLLLARLQHR 300
+++ LG+G +G V + E +AVK + K + K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINRE-HMTWEKRYKIIEGIARGLLYL 359
N+V+ G E + L E+ L FD I + M + + G++YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H + I HRD+K N+LLD N KISDFG+A +F + N++ GT Y+APE
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 178
Query: 420 VMHGRFSVKS-DIFSFGVLVLEIVSGQ 445
+ F + D++S G+++ +++G+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 13/193 (6%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCLE 311
+G+G FG V G G +AVK + KN + F E ++ +L+H NLV+LLG +E
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCI-KNDATAQ-AFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 312 RKERI-LVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHR 370
K + +V E++ SL ++ R + + K + + YL ++ +HR
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 126
Query: 371 DLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSD 430
DL A N+L+ + K+SDFG+ + E T DT ++ + APE + +FS KSD
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTK--EASSTQ-DTGKL--PVKWTAPEALREKKFSTKSD 181
Query: 431 IFSFGVLVLEIVS 443
++SFG+L+ EI S
Sbjct: 182 VWSFGILLWEIYS 194
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 22/223 (9%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARL 297
A ++F LG+G FG VY + I A+K L K K G E + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGL 356
+H N++RL G+ + L+ E+ P + ++ + + E+R I +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 124
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFG 413
Y H R+IHRD+K N+LL S KI++FG + H+ ++R + GT
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS-------VHAPSSRRTTLCGTLD 174
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
Y+ PE + K D++S GVL E + G+ T +ET
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 119/231 (51%), Gaps = 22/231 (9%)
Query: 246 FSDANKLGQGGFGAVYKG-MLSNGETIAVKR-LSKNSKQG-EIEFKNEVLLLARLQHRNL 302
+ K+GQG FG V+K G+ +A+K+ L +N K+G I E+ +L L+H N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 303 VRLLGFCLERKERI--------LVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIAR 354
V L+ C + LV++F + L + + + + ++ KR +++ +
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLN 136
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEM---DQTHSDTNRVVGT 411
GL Y+H R +I+HRD+KA+N+L+ + K++DFG+AR F + Q + NRVV T
Sbjct: 137 GLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-T 192
Query: 412 FGYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLT 461
Y PE ++ R + D++ G ++ E+ + TE+ L++
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 243
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 127/280 (45%), Gaps = 31/280 (11%)
Query: 232 LQFDF-ETIRVATDNFSDANKLGQGGFGAVYKGML-SNGETIAVKRLSKNSKQ---GEIE 286
LQ+ + E V + F LG+GGFG V + + G+ A K+L K + GE
Sbjct: 171 LQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAM 230
Query: 287 FKNEVLLLARLQHRNLVRLLGFCLERKERI-LVYEFVPNASLDHFIFDPINREHMTWEKR 345
NE +L ++ R +V L + E K+ + LV + L I+ + + +
Sbjct: 231 ALNEKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYH-MGQAGFPEARA 288
Query: 346 YKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDT 405
I GL LH R RI++RDLK NILLD + +ISD G+A QT
Sbjct: 289 VFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT---I 342
Query: 406 NRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG----QKRSSFGTEEETEDLLT 461
VGT GYMAPE V + R++ D ++ G L+ E+++G Q+R EE E L+
Sbjct: 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK 402
Query: 462 YAWRNWNE---------GAALNLMDPT----MRGGSTSEM 488
++E + L DP RGGS E+
Sbjct: 403 EVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREV 442
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 22/225 (9%)
Query: 244 DNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQG--EIEFKNEVLLLA 295
D + +LG G F V K G+ + I KR +K+S++G + + EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 296 RLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARG 355
+QH N++ L + + IL+ E V L F+ + +E +T E+ + ++ I G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNG 126
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPK----ISDFGMARLFEMDQTHSDTNRVVGT 411
+ YLH L+I H DLK NI+L PK I DFG+A + ++ + GT
Sbjct: 127 VYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NEFKNIFGT 180
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
++APE V + +++D++S GV+ ++SG T++ET
Sbjct: 181 PAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 252 LGQGGFGAV--YKGMLSN---GETIAVKRLSKN-SKQGEIEFKNEVLLLARLQHRNLVRL 305
LG+G FG V Y +N GE +AVK L + Q ++ E+ +L L H ++V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 306 LGFCLERKERI--LVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
G C ++ E+ LV E+VP SL D + R + + + I G+ YLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLR----DYLPRHCVGLAQLLLFAQQICEGMAYLHAQ- 131
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLF----EMDQTHSDTNRVVGTFGYMAPEY 419
IHR L A N+LLD++ KI DFG+A+ E + D + V F Y APE
Sbjct: 132 --HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV--FWY-APEC 186
Query: 420 VMHGRFSVKSDIFSFGVLVLEIVS 443
+ +F SD++SFGV + E+++
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLT 210
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 101/193 (52%), Gaps = 13/193 (6%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCLE 311
+G+G FG V G G +AVK + KN + F E ++ +L+H NLV+LLG +E
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCI-KNDATAQ-AFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 312 RKERI-LVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHR 370
K + +V E++ SL ++ R + + K + + YL ++ +HR
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 132
Query: 371 DLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSD 430
DL A N+L+ + K+SDFG+ + E T DT ++ + APE + FS KSD
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTK--EASSTQ-DTGKL--PVKWTAPEALREAAFSTKSD 187
Query: 431 IFSFGVLVLEIVS 443
++SFG+L+ EI S
Sbjct: 188 VWSFGILLWEIYS 200
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 252 LGQGGFGAV--YKGMLSN---GETIAVKRLSKN-SKQGEIEFKNEVLLLARLQHRNLVRL 305
LG+G FG V Y +N GE +AVK L + Q ++ E+ +L L H ++V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 306 LGFCLERKER--ILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
G C ++ E+ LV E+VP SL D + R + + + I G+ YLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLR----DYLPRHCVGLAQLLLFAQQICEGMAYLHAQ- 130
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLF----EMDQTHSDTNRVVGTFGYMAPEY 419
IHR L A N+LLD++ KI DFG+A+ E + D + V F Y APE
Sbjct: 131 --HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV--FWY-APEC 185
Query: 420 VMHGRFSVKSDIFSFGVLVLEIVS 443
+ +F SD++SFGV + E+++
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLT 209
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 119/231 (51%), Gaps = 22/231 (9%)
Query: 246 FSDANKLGQGGFGAVYKG-MLSNGETIAVKR-LSKNSKQG-EIEFKNEVLLLARLQHRNL 302
+ K+GQG FG V+K G+ +A+K+ L +N K+G I E+ +L L+H N+
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 78
Query: 303 VRLLGFCLERKERI--------LVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIAR 354
V L+ C + LV++F + L + + + + ++ KR +++ +
Sbjct: 79 VNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLN 135
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEM---DQTHSDTNRVVGT 411
GL Y+H R +I+HRD+KA+N+L+ + K++DFG+AR F + Q + NRVV T
Sbjct: 136 GLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-T 191
Query: 412 FGYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLT 461
Y PE ++ R + D++ G ++ E+ + TE+ L++
Sbjct: 192 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 242
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 101/214 (47%), Gaps = 33/214 (15%)
Query: 251 KLGQGGFGAVYKGMLS--NGETI--AVKRLSKN---SKQGEIEFKNEVLLLARLQHRNLV 303
KLG G FG V +G +G+T+ AVK L + + +F EV + L HRNL+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 304 RLLGFCLERKERILVYEFVPNASL--------DHFIFDPINREHMTWEKRYKIIEGIARG 355
RL G L + +V E P SL HF+ ++R Y + +A G
Sbjct: 85 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--------YAV--QVAEG 133
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHS--DTNRVVGTFG 413
+ YL R IHRDL A N+LL + KI DFG+ R + H +R V F
Sbjct: 134 MGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFA 189
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVS-GQK 446
+ APE + FS SD + FGV + E+ + GQ+
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE 223
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 22/221 (9%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARLQH 299
++F LG+G FG VY + I A+K L K K G E + + EV + + L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 300 RNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGLLY 358
N++RL G+ + L+ E+ P + ++ + + E+R I +A L Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSRFDEQRTATYITELANALSY 127
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFGYM 415
H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT Y+
Sbjct: 128 CHSK---RVIHRDIKPENLLLGSNGELKIADFGWS-------VHAPSSRRDTLCGTLDYL 177
Query: 416 APEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
PE + K D++S GVL E + G T +ET
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET 218
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 22/221 (9%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNS--KQG-EIEFKNEVLLLARLQH 299
++F LG+G FG VY + I A+K L K K G E + + EV + + L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 300 RNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGLLY 358
N++RL G+ + L+ E+ P + ++ + + E+R I +A L Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSRFDEQRTATYITELANALSY 127
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFGYM 415
H R+IHRD+K N+LL S KI+DFG + H+ ++R + GT Y+
Sbjct: 128 CHSK---RVIHRDIKPENLLLGSNGELKIADFGWS-------VHAPSSRRTTLCGTLDYL 177
Query: 416 APEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
PE + K D++S GVL E + G T +ET
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET 218
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 114/232 (49%), Gaps = 33/232 (14%)
Query: 240 RVATDNFSDANKLGQGGFGAVYKGMLSN----GETIAVKRLSKNS--KQGEIEFKN-EVL 292
RV +F+ LG+G FG V ML++ E A+K L K+ + ++E E
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKV---MLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKR 71
Query: 293 LLARLQHRNLVRLLGFCLERKERI-LVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEG 351
+LA L + L C + +R+ V E+V L + H+ ++K +
Sbjct: 72 VLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMY---------HIQQVGKFKEPQA 122
Query: 352 ------IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDT 405
I+ GL +LH+ II+RDLK N++LDSE + KI+DFGM + MD T
Sbjct: 123 VFYAAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV--TT 177
Query: 406 NRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETE 457
GT Y+APE + + + D +++GVL+ E+++GQ F E+E E
Sbjct: 178 REFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ--PPFDGEDEDE 227
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 101/214 (47%), Gaps = 33/214 (15%)
Query: 251 KLGQGGFGAVYKGMLS--NGETI--AVKRLSKN---SKQGEIEFKNEVLLLARLQHRNLV 303
KLG G FG V +G +G+T+ AVK L + + +F EV + L HRNL+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 304 RLLGFCLERKERILVYEFVPNASL--------DHFIFDPINREHMTWEKRYKIIEGIARG 355
RL G L + +V E P SL HF+ ++R Y + +A G
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--------YAV--QVAEG 127
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTH--SDTNRVVGTFG 413
+ YL R IHRDL A N+LL + KI DFG+ R + H +R V F
Sbjct: 128 MGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFA 183
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVS-GQK 446
+ APE + FS SD + FGV + E+ + GQ+
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE 217
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 124/268 (46%), Gaps = 34/268 (12%)
Query: 240 RVATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNS--KQGEIE---FKNEVLL 293
R+ DNF LG+G FG V + G+ AVK L K+ + ++E + +L
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS 78
Query: 294 LARLQHRNLVRLLGFCLERKERIL-VYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGI 352
LAR H L +L C + +R+ V EFV L I +R R+ E I
Sbjct: 79 LAR-NHPFLTQLFC-CFQTPDRLFFVMEFVNGGDLMFHI--QKSRRFDEARARFYAAE-I 133
Query: 353 ARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF 412
L++LH+ II+RDLK N+LLD E + K++DFGM + E T GT
Sbjct: 134 ISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTP 188
Query: 413 GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRN------ 466
Y+APE + + D ++ GVL+ E++ G + F E E ED L A N
Sbjct: 189 DYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGH--APF--EAENEDDLFEAILNDEVVYP 244
Query: 467 -WNEGAALNLM------DPTMRGGSTSE 487
W A ++ +PTMR GS ++
Sbjct: 245 TWLHEDATGILKSFMTKNPTMRLGSLTQ 272
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 53/234 (22%)
Query: 245 NFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLV 303
+F + +G GGFG V+K +G+T ++R+ N+++ E EV LA+L H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE----REVKALAKLDHVNIV 68
Query: 304 RLLGFCLERKERILVYEFVP---NASLDHFIFDPINREHMT------------------- 341
G C + +++ P + SL+ +DP N ++ +
Sbjct: 69 HYNG-CWDG------FDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTL 121
Query: 342 --W-EKR----------YKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKIS 388
W EKR ++ E I +G+ Y+H ++IHRDLK SNI L KI
Sbjct: 122 EQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIG 178
Query: 389 DFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIV 442
DFG+ + D + R GT YM+PE + + + D+++ G+++ E++
Sbjct: 179 DFGLVTSLKNDGKRT---RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 251 KLGQGGFGAVYKGMLSN-GETIAVKRLSKN-SKQGEIEFKNEVLLLARLQHRNLV--RLL 306
+LG GGFG V + + + GE +A+K+ + S + + E+ ++ +L H N+V R +
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 81
Query: 307 GFCLERKER----ILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
L++ +L E+ L ++ N + ++ I+ L YLHE+
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 141
Query: 363 SRLRIIHRDLKASNILLD---SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
RIIHRDLK NI+L + KI D G A+ E+DQ T VGT Y+APE
Sbjct: 142 ---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTE-FVGTLQYLAPEL 195
Query: 420 VMHGRFSVKSDIFSFGVLVLEIVSG 444
+ +++V D +SFG L E ++G
Sbjct: 196 LEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 22/225 (9%)
Query: 244 DNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQG--EIEFKNEVLLLA 295
D + +LG G F V K G+ + I KR +K+S++G + + EV +L
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 296 RLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARG 355
+QH N++ L + + IL+ E V L F+ + +E +T E+ + ++ I G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNG 126
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPK----ISDFGMARLFEMDQTHSDTNRVVGT 411
+ YLH L+I H DLK NI+L PK I DFG+A + ++ + GT
Sbjct: 127 VYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NEFKNIFGT 180
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
++APE V + +++D++S GV+ ++SG T++ET
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 127/280 (45%), Gaps = 31/280 (11%)
Query: 232 LQFDF-ETIRVATDNFSDANKLGQGGFGAVYKGML-SNGETIAVKRLSKNSKQ---GEIE 286
LQ+ + E V + F LG+GGFG V + + G+ A K+L K + GE
Sbjct: 171 LQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAM 230
Query: 287 FKNEVLLLARLQHRNLVRLLGFCLERKERI-LVYEFVPNASLDHFIFDPINREHMTWEKR 345
NE +L ++ R +V L + E K+ + LV + L I+ + + +
Sbjct: 231 ALNEKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYH-MGQAGFPEARA 288
Query: 346 YKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDT 405
I GL LH R RI++RDLK NILLD + +ISD G+A QT
Sbjct: 289 VFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT---I 342
Query: 406 NRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG----QKRSSFGTEEETEDLLT 461
VGT GYMAPE V + R++ D ++ G L+ E+++G Q+R EE E L+
Sbjct: 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK 402
Query: 462 YAWRNWNEG---------AALNLMDPT----MRGGSTSEM 488
++E + L DP RGGS E+
Sbjct: 403 EVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREV 442
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 251 KLGQGGFGAVYKGMLSN-GETIAVKRLSKN-SKQGEIEFKNEVLLLARLQHRNLV--RLL 306
+LG GGFG V + + + GE +A+K+ + S + + E+ ++ +L H N+V R +
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 307 GFCLERKER----ILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
L++ +L E+ L ++ N + ++ I+ L YLHE+
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 140
Query: 363 SRLRIIHRDLKASNILLD---SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
RIIHRDLK NI+L + KI D G A+ E+DQ T VGT Y+APE
Sbjct: 141 ---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTE-FVGTLQYLAPEL 194
Query: 420 VMHGRFSVKSDIFSFGVLVLEIVSG 444
+ +++V D +SFG L E ++G
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 100/218 (45%), Gaps = 32/218 (14%)
Query: 251 KLGQGGFGAVYKGMLS--NGETI--AVKRLSKN---SKQGEIEFKNEVLLLARLQHRNLV 303
KLG G FG V +G +G+T+ AVK L + + +F EV + L HRNL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 304 RLLGFCLERKERILVYEFVPNASL--------DHFIFDPINREHMTWEKRYKIIEGIARG 355
RL G L + +V E P SL HF+ ++R Y + +A G
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--------YAV--QVAEG 123
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHS--DTNRVVGTFG 413
+ YL R IHRDL A N+LL + KI DFG+ R + H +R V F
Sbjct: 124 MGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFA 179
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFG 451
+ APE + FS SD + FGV + E+ + + G
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 217
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNS--KQGEIEF-KNEVLLLARLQH 299
++F LG+G F V L+ A+K L K K+ ++ + E +++RL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 300 RNLVRLLGFCLERKERILV-YEFVPNASLDHFI-----FDPINREHMTWEKRYKIIEGIA 353
V+L F + E++ + N L +I FD T E I
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAE--------IV 142
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
L YLH IIHRDLK NILL+ +M+ +I+DFG A++ + + N VGT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 199
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + S SD+++ G ++ ++V+G
Sbjct: 200 YVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 22/225 (9%)
Query: 244 DNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQG--EIEFKNEVLLLA 295
D + +LG G F V K G+ + I KR +K+S++G + + EV +L
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 68
Query: 296 RLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARG 355
+QH N++ L + + IL+ E V L F+ + +E +T E+ + ++ I G
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNG 125
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPK----ISDFGMARLFEMDQTHSDTNRVVGT 411
+ YLH L+I H DLK NI+L PK I DFG+A + ++ + GT
Sbjct: 126 VYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NEFKNIFGT 179
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
++APE V + +++D++S GV+ ++SG T++ET
Sbjct: 180 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 224
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 22/225 (9%)
Query: 244 DNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQG--EIEFKNEVLLLA 295
D + +LG G F V K G+ + I KR +K+S++G + + EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 296 RLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARG 355
+QH N++ L + + IL+ E V L F+ + +E +T E+ + ++ I G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNG 126
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPK----ISDFGMARLFEMDQTHSDTNRVVGT 411
+ YLH L+I H DLK NI+L PK I DFG+A + ++ + GT
Sbjct: 127 VYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NEFKNIFGT 180
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
++APE V + +++D++S GV+ ++SG T++ET
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 22/225 (9%)
Query: 244 DNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQG--EIEFKNEVLLLA 295
D + +LG G F V K G+ + I KR +K+S++G + + EV +L
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 68
Query: 296 RLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARG 355
+QH N++ L + + IL+ E V L F+ + +E +T E+ + ++ I G
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNG 125
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPK----ISDFGMARLFEMDQTHSDTNRVVGT 411
+ YLH L+I H DLK NI+L PK I DFG+A + ++ + GT
Sbjct: 126 VYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NEFKNIFGT 179
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
++APE V + +++D++S GV+ ++SG T++ET
Sbjct: 180 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 224
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 101/214 (47%), Gaps = 33/214 (15%)
Query: 251 KLGQGGFGAVYKGMLS--NGETI--AVKRLSKN---SKQGEIEFKNEVLLLARLQHRNLV 303
KLG G FG V +G +G+T+ AVK L + + +F EV + L HRNL+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 304 RLLGFCLERKERILVYEFVPNASL--------DHFIFDPINREHMTWEKRYKIIEGIARG 355
RL G L + +V E P SL HF+ ++R Y + +A G
Sbjct: 85 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--------YAV--QVAEG 133
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTH--SDTNRVVGTFG 413
+ YL R IHRDL A N+LL + KI DFG+ R + H +R V F
Sbjct: 134 MGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFA 189
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVS-GQK 446
+ APE + FS SD + FGV + E+ + GQ+
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE 223
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 118/224 (52%), Gaps = 15/224 (6%)
Query: 230 KSLQFDF-ETIRVATDNFSDANKLGQGGFGAVYK-GMLSNGETIAVKRLSKNSKQGEIEF 287
+ LQ+ + E + D F D LG+GGFG V+ M + G+ A K+L+K + +
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 288 KNEVL---LLARLQHRNLVRLLGFCLERKERI-LVYEFVPNASLDHFIFDPINREHMTWE 343
+ ++ +LA++ R +V L + E K + LV + + + I++ ++ ++ ++
Sbjct: 230 QGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYN-VDEDNPGFQ 287
Query: 344 KRYKII--EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQT 401
+ I I GL +LH+ + II+RDLK N+LLD + N +ISD G+A E+
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLA--VELKAG 342
Query: 402 HSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
+ T GT G+MAPE ++ + D F+ GV + E+++ +
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 100/218 (45%), Gaps = 32/218 (14%)
Query: 251 KLGQGGFGAVYKGMLS--NGETI--AVKRLSKN---SKQGEIEFKNEVLLLARLQHRNLV 303
KLG G FG V +G +G+T+ AVK L + + +F EV + L HRNL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 304 RLLGFCLERKERILVYEFVPNASL--------DHFIFDPINREHMTWEKRYKIIEGIARG 355
RL G L + +V E P SL HF+ ++R Y + +A G
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--------YAV--QVAEG 123
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTH--SDTNRVVGTFG 413
+ YL R IHRDL A N+LL + KI DFG+ R + H +R V F
Sbjct: 124 MGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFA 179
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFG 451
+ APE + FS SD + FGV + E+ + + G
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 217
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 22/225 (9%)
Query: 244 DNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQG--EIEFKNEVLLLA 295
D + +LG G F V K G+ + I KR +K+S++G + + EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 296 RLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARG 355
+QH N++ L + + IL+ E V L F+ + +E +T E+ + ++ I G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNG 126
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPK----ISDFGMARLFEMDQTHSDTNRVVGT 411
+ YLH L+I H DLK NI+L PK I DFG+A + ++ + GT
Sbjct: 127 VYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NEFKNIFGT 180
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
++APE V + +++D++S GV+ ++SG T++ET
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 22/225 (9%)
Query: 244 DNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQG--EIEFKNEVLLLA 295
D + +LG G F V K G+ + I KR +K+S++G + + EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 296 RLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARG 355
+QH N++ L + + IL+ E V L F+ + +E +T E+ + ++ I G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNG 126
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPK----ISDFGMARLFEMDQTHSDTNRVVGT 411
+ YLH L+I H DLK NI+L PK I DFG+A + ++ + GT
Sbjct: 127 VYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NEFKNIFGT 180
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
++APE V + +++D++S GV+ ++SG T++ET
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS-KNSKQGEIEFKNEVLLLARLQHR 300
+++ LG+G G V + E +AVK + K + K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINRE-HMTWEKRYKIIEGIARGLLYL 359
N+V+ G E + L E+ L FD I + M + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H + I HRD+K N+LLD N KISDFG+A +F + N++ GT Y+APE
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 420 VMHGRFSVKS-DIFSFGVLVLEIVSGQ 445
+ F + D++S G+++ +++G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 22/225 (9%)
Query: 244 DNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQG--EIEFKNEVLLLA 295
D + +LG G F V K G+ + I KR +K+S++G + + EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 296 RLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARG 355
+QH N++ L + + IL+ E V L F+ + +E +T E+ + ++ I G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNG 126
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPK----ISDFGMARLFEMDQTHSDTNRVVGT 411
+ YLH L+I H DLK NI+L PK I DFG+A + ++ + GT
Sbjct: 127 VYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NEFKNIFGT 180
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
++APE V + +++D++S GV+ ++SG T++ET
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 125/245 (51%), Gaps = 15/245 (6%)
Query: 209 CIFLRVGKLKLEDENVEETIAKSLQFDF-ETIRVATDNFSDANKLGQGGFGAVYK-GMLS 266
+ +G+ ++ + + LQ+ + E + D F D LG+GGFG V+ M +
Sbjct: 149 AVLAHLGQAPFQEFLDSKYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKA 208
Query: 267 NGETIAVKRLSKNSKQGEIEFKNEVL---LLARLQHRNLVRLLGFCLERKERI-LVYEFV 322
G+ A K+L+K + ++ ++ +LA++ R +V L + E K + LV +
Sbjct: 209 TGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIM 267
Query: 323 PNASLDHFIFDPINREHMTWEKRYKII--EGIARGLLYLHEDSRLRIIHRDLKASNILLD 380
+ + I++ ++ ++ +++ I I GL +LH+ + II+RDLK N+LLD
Sbjct: 268 NGGDIRYHIYN-VDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLD 323
Query: 381 SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLE 440
+ N +ISD G+A E+ + T GT G+MAPE ++ + D F+ GV + E
Sbjct: 324 DDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYE 381
Query: 441 IVSGQ 445
+++ +
Sbjct: 382 MIAAR 386
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 22/225 (9%)
Query: 244 DNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQG--EIEFKNEVLLLA 295
D + +LG G F V K G+ + I KR +K+S++G + + EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 296 RLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARG 355
+QH N++ L + + IL+ E V L F+ + +E +T E+ + ++ I G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNG 126
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPK----ISDFGMARLFEMDQTHSDTNRVVGT 411
+ YLH L+I H DLK NI+L PK I DFG+A + ++ + GT
Sbjct: 127 VYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NEFKNIFGT 180
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
++APE V + +++D++S GV+ ++SG T++ET
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 22/225 (9%)
Query: 244 DNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQG--EIEFKNEVLLLA 295
D + +LG G F V K G+ + I KR +K+S++G + + EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 296 RLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARG 355
+QH N++ L + + IL+ E V L F+ + +E +T E+ + ++ I G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNG 126
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPK----ISDFGMARLFEMDQTHSDTNRVVGT 411
+ YLH L+I H DLK NI+L PK I DFG+A + ++ + GT
Sbjct: 127 VYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NEFKNIFGT 180
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
++APE V + +++D++S GV+ ++SG T++ET
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 22/225 (9%)
Query: 244 DNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQG--EIEFKNEVLLLA 295
D + +LG G F V K G+ + I KR +K+S++G + + EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 296 RLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARG 355
+QH N++ L + + IL+ E V L F+ + +E +T E+ + ++ I G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNG 126
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPK----ISDFGMARLFEMDQTHSDTNRVVGT 411
+ YLH L+I H DLK NI+L PK I DFG+A + ++ + GT
Sbjct: 127 VYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NEFKNIFGT 180
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
++APE V + +++D++S GV+ ++SG T++ET
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 101/214 (47%), Gaps = 33/214 (15%)
Query: 251 KLGQGGFGAVYKGMLS--NGETI--AVKRLSKN---SKQGEIEFKNEVLLLARLQHRNLV 303
KLG G FG V +G +G+T+ AVK L + + +F EV + L HRNL+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 304 RLLGFCLERKERILVYEFVPNASL--------DHFIFDPINREHMTWEKRYKIIEGIARG 355
RL G L + +V E P SL HF+ ++R Y + +A G
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--------YAV--QVAEG 127
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTH--SDTNRVVGTFG 413
+ YL R IHRDL A N+LL + KI DFG+ R + H +R V F
Sbjct: 128 MGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFA 183
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVS-GQK 446
+ APE + FS SD + FGV + E+ + GQ+
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE 217
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 10/200 (5%)
Query: 252 LGQGGFGAVYK-GMLSNGETIAVKRLSKNS-KQGEIE-FKNEVLLLARLQHRNLVRLLGF 308
+G G +G K S+G+ + K L S + E + +EV LL L+H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 309 CLERKERIL--VYEFVPNASLDHFIFDPIN-REHMTWEKRYKIIEGIARGLLYLHE--DS 363
++R L V E+ L I R+++ E +++ + L H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHG 423
++HRDLK +N+ LD + N K+ DFG+AR+ D + + T VGT YM+PE +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVGTPYYMSPEQMNRM 191
Query: 424 RFSVKSDIFSFGVLVLEIVS 443
++ KSDI+S G L+ E+ +
Sbjct: 192 SYNEKSDIWSLGCLLYELCA 211
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 22/225 (9%)
Query: 244 DNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQG--EIEFKNEVLLLA 295
D + +LG G F V K G+ + I KR +K+S++G + + EV +L
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 296 RLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARG 355
+QH N++ L + + IL+ E V L F+ + +E +T E+ + ++ I G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNG 126
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPK----ISDFGMARLFEMDQTHSDTNRVVGT 411
+ YLH L+I H DLK NI+L PK I DFG+A + ++ + GT
Sbjct: 127 VYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NEFKNIFGT 180
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
++APE V + +++D++S GV+ ++SG T++ET
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 118/224 (52%), Gaps = 15/224 (6%)
Query: 230 KSLQFDF-ETIRVATDNFSDANKLGQGGFGAVYK-GMLSNGETIAVKRLSKNSKQGEIEF 287
+ LQ+ + E + D F D LG+GGFG V+ M + G+ A K+L+K + +
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 288 KNEVL---LLARLQHRNLVRLLGFCLERKERI-LVYEFVPNASLDHFIFDPINREHMTWE 343
+ ++ +LA++ R +V L + E K + LV + + + I++ ++ ++ ++
Sbjct: 230 QGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYN-VDEDNPGFQ 287
Query: 344 KRYKII--EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQT 401
+ I I GL +LH+ + II+RDLK N+LLD + N +ISD G+A E+
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLA--VELKAG 342
Query: 402 HSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
+ T GT G+MAPE ++ + D F+ GV + E+++ +
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 118/224 (52%), Gaps = 15/224 (6%)
Query: 230 KSLQFDF-ETIRVATDNFSDANKLGQGGFGAVYK-GMLSNGETIAVKRLSKNSKQGEIEF 287
+ LQ+ + E + D F D LG+GGFG V+ M + G+ A K+L+K + +
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 288 KNEVL---LLARLQHRNLVRLLGFCLERKERI-LVYEFVPNASLDHFIFDPINREHMTWE 343
+ ++ +LA++ R +V L + E K + LV + + + I++ ++ ++ ++
Sbjct: 230 QGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYN-VDEDNPGFQ 287
Query: 344 KRYKII--EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQT 401
+ I I GL +LH+ + II+RDLK N+LLD + N +ISD G+A E+
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLA--VELKAG 342
Query: 402 HSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
+ T GT G+MAPE ++ + D F+ GV + E+++ +
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 115/233 (49%), Gaps = 18/233 (7%)
Query: 220 EDENVEETIAKSLQFDFETIRVATDNFSDANKLGQGGFGAVY----KGMLSNGETIAVKR 275
+DE V + I+ + + + +F LGQG FG V+ +G A+K
Sbjct: 4 KDEGVLKEISITHHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKV 63
Query: 276 LSKNSKQ--GEIEFKNEVLLLARLQHRNLVRL-LGFCLERKERILVYEFVPNASLDHFIF 332
L K + + + K E +LA + H +V+L F E K L+ +F+ L F
Sbjct: 64 LKKATLKVRDRVRTKMERDILADVNHPFVVKLHYAFQTEGK-LYLILDFLRGGDL----F 118
Query: 333 DPINREHMTWEKRYKI-IEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFG 391
+++E M E+ K + +A GL +LH L II+RDLK NILLD E + K++DFG
Sbjct: 119 TRLSKEVMFTEEDVKFYLAELALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFG 175
Query: 392 MARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++ E GT YMAPE V S +D +S+GVL+ E+++G
Sbjct: 176 LSK--EAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 114/234 (48%), Gaps = 38/234 (16%)
Query: 238 TIRVATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFKNEVLLLAR 296
++R A+D F + LGQG FG V K + + A+K++ +++++ +EV LLA
Sbjct: 1 SLRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLAS 58
Query: 297 LQHRNLVRLLGFCLERKERI-------------LVYEFVPNASLDHFIFDPINREHMTWE 343
L H+ +VR LER+ + + E+ N +L +D I+ E++ +
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTL----YDLIHSENLNQQ 114
Query: 344 K--RYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR------- 394
+ +++ I L Y+H IIHR+LK NI +D N KI DFG+A+
Sbjct: 115 RDEYWRLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 395 LFEMDQ-----THSDTNRVVGTFGYMAPEYV-MHGRFSVKSDIFSFGVLVLEIV 442
+ ++D + + +GT Y+A E + G ++ K D +S G++ E +
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 111/224 (49%), Gaps = 28/224 (12%)
Query: 244 DNFSDANKLGQGGFGAVY--------KGMLSNGETIAVKRLSKNSKQGEI-EFKNEVLLL 294
D LG+G FG V K + +AVK L ++ + ++ + +E+ ++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 295 ARL-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI-----------FDPIN--REHM 340
+ +H+N++ LLG C + ++ E+ +L ++ F+P + E +
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 341 TWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMD 399
+ + +ARG+ YL + + IHRDL A N+L+ + KI+DFG+AR + +D
Sbjct: 148 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 400 QTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
TN + +MAPE + ++ +SD++SFGVL+ EI +
Sbjct: 205 XXKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 22/225 (9%)
Query: 244 DNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQG--EIEFKNEVLLLA 295
D + +LG G F V K G+ + I KR +K+S++G + + EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 296 RLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARG 355
+QH N++ L + + IL+ E V L F+ + +E +T E+ + ++ I G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNG 126
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPK----ISDFGMARLFEMDQTHSDTNRVVGT 411
+ YLH L+I H DLK NI+L PK I DFG+A + ++ + GT
Sbjct: 127 VYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NEFKNIFGT 180
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
++APE V + +++D++S GV+ ++SG T++ET
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQGEIE-FKN 289
E +N LG G FG V + G +AVK L + E E +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 290 EVLLLARL-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI-----------FDPIN- 336
E+ +++ L QH N+V LLG C +++ E+ L +F+ ++P +
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHN 158
Query: 337 -REHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARL 395
E ++ +A+G+ +L + IHRD+ A N+LL + KI DFG+AR
Sbjct: 159 PEEQLSSRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARD 215
Query: 396 FEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
D + +MAPE + ++V+SD++S+G+L+ EI S
Sbjct: 216 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 101/214 (47%), Gaps = 33/214 (15%)
Query: 251 KLGQGGFGAVYKGMLS--NGETI--AVKRLSKN---SKQGEIEFKNEVLLLARLQHRNLV 303
KLG G FG V +G +G+T+ AVK L + + +F EV + L HRNL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 304 RLLGFCLERKERILVYEFVPNASL--------DHFIFDPINREHMTWEKRYKIIEGIARG 355
RL G L + +V E P SL HF+ ++R Y + +A G
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--------YAV--QVAEG 123
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTH--SDTNRVVGTFG 413
+ YL R IHRDL A N+LL + KI DFG+ R + H +R V F
Sbjct: 124 MGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFA 179
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVS-GQK 446
+ APE + FS SD + FGV + E+ + GQ+
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE 213
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 110/208 (52%), Gaps = 15/208 (7%)
Query: 246 FSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQHRNLV 303
+++ + +G+G +G V + N +A+K++S Q + E+ +L R +H N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 304 RLLGFC----LERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYL 359
+ +E+ + + + + A L + + +H++ + + I RGL Y+
Sbjct: 105 GINDIIRAPTIEQMKDVYLVTHLMGADL----YKLLKTQHLSNDHICYFLYQILRGLKYI 160
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD-TNRVVGTFGYMAPE 418
H + ++HRDLK SN+LL++ + KI DFG+AR+ + D H+ V T Y APE
Sbjct: 161 HSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 419 YVMHGRFSVKS-DIFSFGVLVLEIVSGQ 445
+++ + KS DI+S G ++ E++S +
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 22/225 (9%)
Query: 244 DNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQG--EIEFKNEVLLLA 295
D + +LG G F V K G+ + I KR +K+S++G + + EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 296 RLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARG 355
+QH N++ L + + IL+ E V L F+ + +E +T E+ + ++ I G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAE---KESLTEEEATEFLKQILNG 126
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPK----ISDFGMARLFEMDQTHSDTNRVVGT 411
+ YLH L+I H DLK NI+L PK I DFG+A + ++ + GT
Sbjct: 127 VYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NEFKNIFGT 180
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
++APE V + +++D++S GV+ ++SG T++ET
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 17/229 (7%)
Query: 229 AKSLQFDFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGE----TIAVKRLS-KNSKQG 283
++ LQ E + + + LG+G FG+V +G L + +AVK + NS Q
Sbjct: 19 SEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQR 78
Query: 284 EIE-FKNEVLLLARLQHRNLVRLLGFCLERKER-----ILVYEFVPNASLDHFIFDP--- 334
EIE F +E + H N++RLLG C+E + +++ F+ L ++
Sbjct: 79 EIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLE 138
Query: 335 INREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR 394
+H+ + K + IA G+ YL S +HRDL A N +L +M ++DFG+++
Sbjct: 139 TGPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSK 195
Query: 395 LFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ ++A E + ++ KSD+++FGV + EI +
Sbjct: 196 KIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 246 FSDANKLGQGGFGAV---YKGMLSNGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQHRN 301
+++ + +G+G +G V Y + N +A+K++S Q + E+ +L R +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 302 LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHE 361
++ + + ++ ++ ++ + +H++ + + I RGL Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD-TNRVVGTFGYMAPEYV 420
+ ++HRDLK SN+LL++ + KI DFG+AR+ + D H+ V T Y APE +
Sbjct: 147 AN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 421 MHGRFSVKS-DIFSFGVLVLEIVSGQ 445
++ + KS DI+S G ++ E++S +
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 246 FSDANKLGQGGFGAV---YKGMLSNGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQHRN 301
+++ + +G+G +G V Y + N +A+K++S Q + E+ +L R +H N
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 87
Query: 302 LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHE 361
++ + + ++ ++ ++ + +H++ + + I RGL Y+H
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 147
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD-TNRVVGTFGYMAPEYV 420
+ ++HRDLK SN+LL++ + KI DFG+AR+ + D H+ V T Y APE +
Sbjct: 148 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 204
Query: 421 MHGRFSVKS-DIFSFGVLVLEIVSGQ 445
++ + KS DI+S G ++ E++S +
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 246 FSDANKLGQGGFGAV---YKGMLSNGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQHRN 301
+++ + +G+G +G V Y + N +A+K++S Q + E+ +L R +H N
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 88
Query: 302 LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHE 361
++ + + ++ ++ ++ + +H++ + + I RGL Y+H
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 148
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD-TNRVVGTFGYMAPEYV 420
+ ++HRDLK SN+LL++ + KI DFG+AR+ + D H+ V T Y APE +
Sbjct: 149 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 205
Query: 421 MHGRFSVKS-DIFSFGVLVLEIVSGQ 445
++ + KS DI+S G ++ E++S +
Sbjct: 206 LNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 246 FSDANKLGQGGFGAV---YKGMLSNGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQHRN 301
+++ + +G+G +G V Y + N +A+K++S Q + E+ +L R +H N
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 79
Query: 302 LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHE 361
++ + + ++ ++ ++ + +H++ + + I RGL Y+H
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 139
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD-TNRVVGTFGYMAPEYV 420
+ ++HRDLK SN+LL++ + KI DFG+AR+ + D H+ V T Y APE +
Sbjct: 140 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 196
Query: 421 MHGRFSVKS-DIFSFGVLVLEIVSGQ 445
++ + KS DI+S G ++ E++S +
Sbjct: 197 LNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 246 FSDANKLGQGGFGAV---YKGMLSNGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQHRN 301
+++ + +G+G +G V Y + N +A+K++S Q + E+ +L R +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 302 LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHE 361
++ + + ++ ++ ++ + +H++ + + I RGL Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD-TNRVVGTFGYMAPEYV 420
+ ++HRDLK SN+LL++ + KI DFG+AR+ + D H+ V T Y APE +
Sbjct: 147 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 421 MHGRFSVKS-DIFSFGVLVLEIVSGQ 445
++ + KS DI+S G ++ E++S +
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 246 FSDANKLGQGGFGAV---YKGMLSNGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQHRN 301
+++ + +G+G +G V Y + N +A+K++S Q + E+ +L R +H N
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 80
Query: 302 LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHE 361
++ + + ++ ++ ++ + +H++ + + I RGL Y+H
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 140
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD-TNRVVGTFGYMAPEYV 420
+ ++HRDLK SN+LL++ + KI DFG+AR+ + D H+ V T Y APE +
Sbjct: 141 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 421 MHGRFSVKS-DIFSFGVLVLEIVSGQ 445
++ + KS DI+S G ++ E++S +
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 107/204 (52%), Gaps = 7/204 (3%)
Query: 246 FSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQHRNLV 303
+++ + +G+G +G V + N +A+K++S Q + E+ +L R +H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 304 RLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
+ + ++ ++ ++ + +H++ + + I RGL Y+H +
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 144
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD-TNRVVGTFGYMAPEYVMH 422
++HRDLK SN+LL++ + KI DFG+AR+ + D H+ V T Y APE +++
Sbjct: 145 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 423 GRFSVKS-DIFSFGVLVLEIVSGQ 445
+ KS DI+S G ++ E++S +
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 40/221 (18%)
Query: 245 NFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLV 303
+F + +G GGFG V+K +G+T +KR+ N+++ E EV LA+L H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE----REVKALAKLDHVNIV 67
Query: 304 RLLGFCLE-----------------RKERILVYEFVPNASLDHFIFDPINREHMTWEKRY 346
G C + K + EF +L+ +I E EK
Sbjct: 68 HYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI------EKRRGEKLD 120
Query: 347 KII-----EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQT 401
K++ E I +G+ Y+H ++I+RDLK SNI L KI DFG+ + D
Sbjct: 121 KVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND-- 175
Query: 402 HSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIV 442
R GT YM+PE + + + D+++ G+++ E++
Sbjct: 176 -GKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 246 FSDANKLGQGGFGAV---YKGMLSNGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQHRN 301
+++ + +G+G +G V Y + N +A+K++S Q + E+ +L R +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHEN 86
Query: 302 LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHE 361
++ + + ++ ++ ++ + +H++ + + I RGL Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD-TNRVVGTFGYMAPEYV 420
+ ++HRDLK SN+LL++ + KI DFG+AR+ + D H+ V T Y APE +
Sbjct: 147 AN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 421 MHGRFSVKS-DIFSFGVLVLEIVSGQ 445
++ + KS DI+S G ++ E++S +
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 246 FSDANKLGQGGFGAV---YKGMLSNGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQHRN 301
+++ + +G+G +G V Y + N +A+K++S Q + E+ +L R +H N
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 80
Query: 302 LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHE 361
++ + + ++ ++ ++ + +H++ + + I RGL Y+H
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 140
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD-TNRVVGTFGYMAPEYV 420
+ ++HRDLK SN+LL++ + KI DFG+AR+ + D H+ V T Y APE +
Sbjct: 141 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 421 MHGRFSVKS-DIFSFGVLVLEIVSGQ 445
++ + KS DI+S G ++ E++S +
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 107/204 (52%), Gaps = 7/204 (3%)
Query: 246 FSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQHRNLV 303
+++ + +G+G +G V + N +A+K++S Q + E+ +L R +H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 304 RLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
+ + ++ ++ ++ + +H++ + + I RGL Y+H +
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 146
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD-TNRVVGTFGYMAPEYVMH 422
++HRDLK SN+LL++ + KI DFG+AR+ + D H+ V T Y APE +++
Sbjct: 147 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 423 GRFSVKS-DIFSFGVLVLEIVSGQ 445
+ KS DI+S G ++ E++S +
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNS--KQGEIEF-KNEVLLLARLQH 299
++F LG+G F V L+ A+K L K K+ ++ + E +++RL H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 300 RNLVRLLGFCLERKERILV-YEFVPNASLDHFI-----FDPINREHMTWEKRYKIIEGIA 353
V+L F + E++ + N L +I FD T E I
Sbjct: 70 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 120
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
L YLH IIHRDLK NILL+ +M+ +I+DFG A++ + + N VGT
Sbjct: 121 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 177
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + SD+++ G ++ ++V+G
Sbjct: 178 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 111/225 (49%), Gaps = 21/225 (9%)
Query: 243 TDNFSDANKLGQGGFGAVY--KGMLSNGETIA--VKRLSKNSKQGEIEFKNEVLLLARLQ 298
+D + KLG G +G V K L+ E +K+ S + +EV +L +L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPIN-REHMTWEKRYKIIEGIARGLL 357
H N+++L F +++ LV E L FD I R+ + I++ + G
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAVIMKQVLSGTT 135
Query: 358 YLHEDSRLRIIHRDLKASNILLDSEMNP---KISDFGMARLFEMDQTHSDTNRVVGTFGY 414
YLH+ + I+HRDLK N+LL+S+ KI DFG++ FE+ + +GT Y
Sbjct: 136 YLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER---LGTAYY 189
Query: 415 MAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDL 459
+APE V+ ++ K D++S GV++ ++ G FG + + E L
Sbjct: 190 IAPE-VLRKKYDEKCDVWSCGVILYILLCGY--PPFGGQTDQEIL 231
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 107/204 (52%), Gaps = 7/204 (3%)
Query: 246 FSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQHRNLV 303
+++ + +G+G +G V + N +A+K++S Q + E+ +L R +H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 304 RLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
+ + ++ ++ ++ + +H++ + + I RGL Y+H +
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 144
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD-TNRVVGTFGYMAPEYVMH 422
++HRDLK SN+LL++ + KI DFG+AR+ + D H+ V T Y APE +++
Sbjct: 145 ---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 423 GRFSVKS-DIFSFGVLVLEIVSGQ 445
+ KS DI+S G ++ E++S +
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 246 FSDANKLGQGGFGAV---YKGMLSNGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQHRN 301
+++ + +G+G +G V Y + N +A+K++S Q + E+ +L R +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 302 LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHE 361
++ + + ++ ++ ++ + +H++ + + I RGL Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD-TNRVVGTFGYMAPEYV 420
+ ++HRDLK SN+LL++ + KI DFG+AR+ + D H+ V T Y APE +
Sbjct: 147 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 203
Query: 421 MHGRFSVKS-DIFSFGVLVLEIVSGQ 445
++ + KS DI+S G ++ E++S +
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 246 FSDANKLGQGGFGAV---YKGMLSNGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQHRN 301
+++ + +G+G +G V Y + N +A+K++S Q + E+ +L R +H N
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 87
Query: 302 LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHE 361
++ + + ++ ++ ++ + +H++ + + I RGL Y+H
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 147
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD-TNRVVGTFGYMAPEYV 420
+ ++HRDLK SN+LL++ + KI DFG+AR+ + D H+ V T Y APE +
Sbjct: 148 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 204
Query: 421 MHGRFSVKS-DIFSFGVLVLEIVSGQ 445
++ + KS DI+S G ++ E++S +
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 244 DNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQGEIE-FKNEVLLLAR 296
+N LG G FG V + G +AVK L + E E +E+ +++
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 297 L-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI-------FDPINREHMTWEKRYKI 348
L QH N+V LLG C +++ E+ L +F+ D + +
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 349 IEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRV 408
+A+G+ +L + IHRD+ A N+LL + KI DFG+AR D +
Sbjct: 158 SSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 214
Query: 409 VGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+MAPE + ++V+SD++S+G+L+ EI S
Sbjct: 215 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 107/204 (52%), Gaps = 7/204 (3%)
Query: 246 FSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQHRNLV 303
+++ + +G+G +G V + N +A+K++S Q + E+ +L R +H N++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 304 RLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
+ + ++ ++ ++ + +H++ + + I RGL Y+H +
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 152
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD-TNRVVGTFGYMAPEYVMH 422
++HRDLK SN+LL++ + KI DFG+AR+ + D H+ V T Y APE +++
Sbjct: 153 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 209
Query: 423 GRFSVKS-DIFSFGVLVLEIVSGQ 445
+ KS DI+S G ++ E++S +
Sbjct: 210 SKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 107/204 (52%), Gaps = 7/204 (3%)
Query: 246 FSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQHRNLV 303
+++ + +G+G +G V + N +A+K++S Q + E+ +L R +H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 304 RLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
+ + ++ ++ ++ + +H++ + + I RGL Y+H +
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 144
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD-TNRVVGTFGYMAPEYVMH 422
++HRDLK SN+LL++ + KI DFG+AR+ + D H+ V T Y APE +++
Sbjct: 145 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 423 GRFSVKS-DIFSFGVLVLEIVSGQ 445
+ KS DI+S G ++ E++S +
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNS--KQGEIEF-KNEVLLLARLQH 299
++F LG+G F V L+ A+K L K K+ ++ + E +++RL H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 300 RNLVRLLGFCLERKERILV-YEFVPNASLDHFI-----FDPINREHMTWEKRYKIIEGIA 353
V+L F + E++ + N L +I FD T E I
Sbjct: 69 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 119
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
L YLH IIHRDLK NILL+ +M+ +I+DFG A++ + + N VGT
Sbjct: 120 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 176
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + SD+++ G ++ ++V+G
Sbjct: 177 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 107/204 (52%), Gaps = 7/204 (3%)
Query: 246 FSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQHRNLV 303
+++ + +G+G +G V + N +A+K++S Q + E+ +L R +H N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 304 RLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
+ + ++ ++ ++ + +H++ + + I RGL Y+H +
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 164
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD-TNRVVGTFGYMAPEYVMH 422
++HRDLK SN+LL++ + KI DFG+AR+ + D H+ V T Y APE +++
Sbjct: 165 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 423 GRFSVKS-DIFSFGVLVLEIVSGQ 445
+ KS DI+S G ++ E++S +
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 110/208 (52%), Gaps = 15/208 (7%)
Query: 246 FSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQHRNLV 303
+++ + +G+G +G V + N +A+K++S Q + E+ +L R +H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 304 RLLGFC----LERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYL 359
+ +E+ + + + + + L + + +H++ + + I RGL Y+
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDL----YKLLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD-TNRVVGTFGYMAPE 418
H + ++HRDLK SN+LL++ + KI DFG+AR+ + D H+ V T Y APE
Sbjct: 141 HSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 419 YVMHGRFSVKS-DIFSFGVLVLEIVSGQ 445
+++ + KS DI+S G ++ E++S +
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNS--KQGEIEF-KNEVLLLARLQH 299
++F LG+G F V L+ A+K L K K+ ++ + E +++RL H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 300 RNLVRLLGFCLERKERILV-YEFVPNASLDHFI-----FDPINREHMTWEKRYKIIEGIA 353
V+L F + E++ + N L +I FD T E I
Sbjct: 95 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 145
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
L YLH IIHRDLK NILL+ +M+ +I+DFG A++ + + N VGT
Sbjct: 146 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 202
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + SD+++ G ++ ++V+G
Sbjct: 203 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNS--KQGEIEF-KNEVLLLARLQH 299
++F LG+G F V L+ A+K L K K+ ++ + E +++RL H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 300 RNLVRLLGFCLERKERILV-YEFVPNASLDHFI-----FDPINREHMTWEKRYKIIEGIA 353
V+L F + E++ + N L +I FD T E I
Sbjct: 93 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 143
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
L YLH IIHRDLK NILL+ +M+ +I+DFG A++ + + N VGT
Sbjct: 144 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 200
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + SD+++ G ++ ++V+G
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 22/219 (10%)
Query: 244 DNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQGEIE-FKNEVLLLAR 296
+N LG G FG V + G +AVK L + E E +E+ +++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 297 L-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI--------FDP---INREHMTWEK 344
L QH N+V LLG C +++ E+ L +F+ DP I ++
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 345 RYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD 404
+A+G+ +L + IHRD+ A N+LL + KI DFG+AR D +
Sbjct: 166 LLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 405 TNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+MAPE + ++V+SD++S+G+L+ EI S
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNS--KQGEIEF-KNEVLLLARLQH 299
++F LG+G F V L+ A+K L K K+ ++ + E +++RL H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 300 RNLVRLLGFCLERKERILV-YEFVPNASLDHFI-----FDPINREHMTWEKRYKIIEGIA 353
V+L F + E++ + N L +I FD T E I
Sbjct: 93 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 143
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
L YLH IIHRDLK NILL+ +M+ +I+DFG A++ + + N VGT
Sbjct: 144 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 200
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + SD+++ G ++ ++V+G
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNS--KQGEIEF-KNEVLLLARLQH 299
++F LG+G F V L+ A+K L K K+ ++ + E +++RL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 300 RNLVRLLGFCLERKERILV-YEFVPNASLDHFI-----FDPINREHMTWEKRYKIIEGIA 353
V+L F + E++ + N L +I FD T E I
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 142
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
L YLH IIHRDLK NILL+ +M+ +I+DFG A++ + + N VGT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + SD+++ G ++ ++V+G
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNS--KQGEIEF-KNEVLLLARLQH 299
++F LG+G F V L+ A+K L K K+ ++ + E +++RL H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 300 RNLVRLLGFCLERKERILV-YEFVPNASLDHFI-----FDPINREHMTWEKRYKIIEGIA 353
V+L F + E++ + N L +I FD T E I
Sbjct: 67 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 117
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
L YLH IIHRDLK NILL+ +M+ +I+DFG A++ + + N VGT
Sbjct: 118 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 174
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + SD+++ G ++ ++V+G
Sbjct: 175 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNS--KQGEIEF-KNEVLLLARLQH 299
++F LG+G F V L+ A+K L K K+ ++ + E +++RL H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 300 RNLVRLLGFCLERKERILV-YEFVPNASLDHFI-----FDPINREHMTWEKRYKIIEGIA 353
V+L F + E++ + N L +I FD T E I
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 140
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
L YLH IIHRDLK NILL+ +M+ +I+DFG A++ + + N VGT
Sbjct: 141 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + SD+++ G ++ ++V+G
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 110/208 (52%), Gaps = 15/208 (7%)
Query: 246 FSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQHRNLV 303
+++ + +G+G +G V + N +A+K++S Q + E+ +L R +H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 304 RLLGFC----LERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYL 359
+ +E+ + + + + + L + + +H++ + + I RGL Y+
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDL----YKLLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD-TNRVVGTFGYMAPE 418
H + ++HRDLK SN+LL++ + KI DFG+AR+ + D H+ V T Y APE
Sbjct: 141 HSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 419 YVMHGRFSVKS-DIFSFGVLVLEIVSGQ 445
+++ + KS DI+S G ++ E++S +
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 246 FSDANKLGQGGFGAV---YKGMLSNGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQHRN 301
+++ + +G+G +G V Y + N +A+K++S Q + E+ +L R +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 302 LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHE 361
++ + + ++ ++ ++ + +H++ + + I RGL Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHS 146
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD-TNRVVGTFGYMAPEYV 420
+ ++HRDLK SN+LL++ + KI DFG+AR+ + D H+ V T Y APE +
Sbjct: 147 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 421 MHGRFSVKS-DIFSFGVLVLEIVSGQ 445
++ + KS DI+S G ++ E++S +
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNS--KQGEIEF-KNEVLLLARLQH 299
++F LG+G F V L+ A+K L K K+ ++ + E +++RL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 300 RNLVRLLGFCLERKERILV-YEFVPNASLDHFI-----FDPINREHMTWEKRYKIIEGIA 353
V+L F + E++ + N L +I FD T E I
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 142
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
L YLH IIHRDLK NILL+ +M+ +I+DFG A++ + + N VGT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + SD+++ G ++ ++V+G
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 100/198 (50%), Gaps = 22/198 (11%)
Query: 255 GGFGAVYKGMLSNGETIAVKRLSKNSKQGEIE-FKNEVLLLARLQHRNLVRLL-GFCLER 312
G FG VYK +A ++ + E+E + E+ +LA H N+V+LL F E
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 313 KERILVYEFVPNASLDHFIFDPINREHMTWEKRYKII-EGIARGLLYLHEDSRLRIIHRD 371
IL+ EF ++D + + E E + +++ + L YLH++ +IIHRD
Sbjct: 81 NLWILI-EFCAGGAVDAVMLE---LERPLTESQIQVVCKQTLDALNYLHDN---KIIHRD 133
Query: 372 LKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR---VVGTFGYMAPEYVM-----HG 423
LKA NIL + + K++DFG++ T + R +GT +MAPE VM
Sbjct: 134 LKAGNILFTLDGDIKLADFGVS----AKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDR 189
Query: 424 RFSVKSDIFSFGVLVLEI 441
+ K+D++S G+ ++E+
Sbjct: 190 PYDYKADVWSLGITLIEM 207
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNS--KQGEIEF-KNEVLLLARLQH 299
++F LG+G F V L+ A+K L K K+ ++ + E +++RL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 300 RNLVRLLGFCLERKERILV-YEFVPNASLDHFI-----FDPINREHMTWEKRYKIIEGIA 353
V+L F + E++ + N L +I FD T E I
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 142
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
L YLH IIHRDLK NILL+ +M+ +I+DFG A++ + + N VGT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + SD+++ G ++ ++V+G
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNS--KQGEIEF-KNEVLLLARLQH 299
++F LG+G F V L+ A+K L K K+ ++ + E +++RL H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 300 RNLVRLLGFCLERKERILV-YEFVPNASLDHFI-----FDPINREHMTWEKRYKIIEGIA 353
V+L F + E++ + N L +I FD T E I
Sbjct: 68 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 118
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
L YLH IIHRDLK NILL+ +M+ +I+DFG A++ + + N VGT
Sbjct: 119 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 175
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + SD+++ G ++ ++V+G
Sbjct: 176 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNS--KQGEIEF-KNEVLLLARLQH 299
++F LG+G F V L+ A+K L K K+ ++ + E +++RL H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 300 RNLVRLLGFCLERKERILV-YEFVPNASLDHFI-----FDPINREHMTWEKRYKIIEGIA 353
V+L F + E++ + N L +I FD T E I
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 140
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
L YLH IIHRDLK NILL+ +M+ +I+DFG A++ + + N VGT
Sbjct: 141 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + SD+++ G ++ ++V+G
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 109/228 (47%), Gaps = 20/228 (8%)
Query: 242 ATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQ 298
+ D + KLG+G +G VYK + + ET+A+KR+ ++ + EV LL LQ
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ 91
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
HRN++ L L++E+ N + +P + Y++I G+ +
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVN----F 147
Query: 359 LHEDSRLRIIHRDLKASNILL---DSEMNP--KISDFGMARLFEMDQTHSDTNRVVGTFG 413
H SR R +HRDLK N+LL D+ P KI DFG+AR F + T+ ++ T
Sbjct: 148 CH--SR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI-PIRQFTHEII-TLW 202
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLL 460
Y PE ++ R +S DI+S + E++ K F + E + L
Sbjct: 203 YRPPEILLGSRHYSTSVDIWSIACIWAEML--MKTPLFPGDSEIDQLF 248
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNS--KQGEIEF-KNEVLLLARLQH 299
++F LG+G F V L+ A+K L K K+ ++ + E +++RL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 300 RNLVRLLGFCLERKERILV-YEFVPNASLDHFI-----FDPINREHMTWEKRYKIIEGIA 353
V+L F + E++ + N L +I FD T E I
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 142
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
L YLH IIHRDLK NILL+ +M+ +I+DFG A++ + + N VGT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + SD+++ G ++ ++V+G
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 244 DNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQGEIE-FKNEVLLLAR 296
+N LG G FG V + G +AVK L + E E +E+ +++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 297 L-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI-------FDPINREHMTWEKRYKI 348
L QH N+V LLG C +++ E+ L +F+ D + +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 349 IEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRV 408
+A+G+ +L + IHRD+ A N+LL + KI DFG+AR D +
Sbjct: 166 SSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 409 VGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+MAPE + ++V+SD++S+G+L+ EI S
Sbjct: 223 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNS--KQGEIEF-KNEVLLLARLQH 299
++F LG+G F V L+ A+K L K K+ ++ + E +++RL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 300 RNLVRLLGFCLERKERILV-YEFVPNASLDHFI-----FDPINREHMTWEKRYKIIEGIA 353
V+L F + E++ + N L +I FD T E I
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 142
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
L YLH IIHRDLK NILL+ +M+ +I+DFG A++ + + N VGT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + SD+++ G ++ ++V+G
Sbjct: 200 YVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 107/223 (47%), Gaps = 26/223 (11%)
Query: 244 DNFSDANKLGQGGFGAVY--------KGMLSNGETIAVKRLSKNSKQGEI-EFKNEVLLL 294
D LG+G FG V K + +AVK L ++ + ++ + +E+ ++
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 295 ARL-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI-----------FDPIN--REHM 340
+ +H+N++ LLG C + ++ E+ +L ++ ++P + E +
Sbjct: 73 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 132
Query: 341 TWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQ 400
+ + +ARG+ YL + + IHRDL A N+L+ + KI+DFG+AR
Sbjct: 133 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 189
Query: 401 THSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+ T +MAPE + ++ +SD++SFGVL+ EI +
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNS--KQGEIEF-KNEVLLLARLQH 299
++F LG+G F V L+ A+K L K K+ ++ + E +++RL H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 300 RNLVRLLGFCLERKERILV-YEFVPNASLDHFI-----FDPINREHMTWEKRYKIIEGIA 353
V+L F + E++ + N L +I FD T E I
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 140
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
L YLH IIHRDLK NILL+ +M+ +I+DFG A++ + + N VGT
Sbjct: 141 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQ 197
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + SD+++ G ++ ++V+G
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 111/220 (50%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + +G G +G+V + +G IAVK+LS+ Q I K E+
Sbjct: 44 KTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSR-PFQSIIHAKRTYRELR 102
Query: 293 LLARLQHRNLVRLL-----GFCLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 103 LLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 158
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 159 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 209
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ +++ DI+S G ++ E+++G+
Sbjct: 210 GYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 246 FSDANKLGQGGFGAV---YKGMLSNGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQHRN 301
+++ + +G+G +G V Y + N +A++++S Q + E+ +L R +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 302 LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHE 361
++ + + ++ ++ ++ + +H++ + + I RGL Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD-TNRVVGTFGYMAPEYV 420
+ ++HRDLK SN+LL++ + KI DFG+AR+ + D H+ V T Y APE +
Sbjct: 147 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 421 MHGRFSVKS-DIFSFGVLVLEIVSGQ 445
++ + KS DI+S G ++ E++S +
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 111/224 (49%), Gaps = 28/224 (12%)
Query: 244 DNFSDANKLGQGGFGAVY--------KGMLSNGETIAVKRLSKNSKQGEI-EFKNEVLLL 294
D LG+G FG V K + +AVK L ++ + ++ + +E+ ++
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 295 ARL-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI-----------FDPIN--REHM 340
+ +H+N++ LLG C + ++ E+ +L ++ ++P + E +
Sbjct: 81 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 140
Query: 341 TWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMD 399
+ + +ARG+ YL + + IHRDL A N+L+ + KI+DFG+AR + +D
Sbjct: 141 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 197
Query: 400 QTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
TN + +MAPE + ++ +SD++SFGVL+ EI +
Sbjct: 198 YYKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 111/224 (49%), Gaps = 28/224 (12%)
Query: 244 DNFSDANKLGQGGFGAVY--------KGMLSNGETIAVKRLSKNSKQGEI-EFKNEVLLL 294
D LG+G FG V K + +AVK L ++ + ++ + +E+ ++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 295 ARL-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI-----------FDPIN--REHM 340
+ +H+N++ LLG C + ++ E+ +L ++ ++P + E +
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 341 TWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMD 399
+ + +ARG+ YL + + IHRDL A N+L+ + KI+DFG+AR + +D
Sbjct: 148 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 400 QTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
TN + +MAPE + ++ +SD++SFGVL+ EI +
Sbjct: 205 YYKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 111/224 (49%), Gaps = 28/224 (12%)
Query: 244 DNFSDANKLGQGGFGAVY--------KGMLSNGETIAVKRLSKNSKQGEI-EFKNEVLLL 294
D LG+G FG V K + +AVK L ++ + ++ + +E+ ++
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 295 ARL-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI-----------FDPIN--REHM 340
+ +H+N++ LLG C + ++ E+ +L ++ ++P + E +
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188
Query: 341 TWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMD 399
+ + +ARG+ YL + + IHRDL A N+L+ + KI+DFG+AR + +D
Sbjct: 189 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 245
Query: 400 QTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
TN + +MAPE + ++ +SD++SFGVL+ EI +
Sbjct: 246 YYKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 111/224 (49%), Gaps = 28/224 (12%)
Query: 244 DNFSDANKLGQGGFGAVY--------KGMLSNGETIAVKRLSKNSKQGEI-EFKNEVLLL 294
D LG+G FG V K + +AVK L ++ + ++ + +E+ ++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 295 ARL-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI-----------FDPIN--REHM 340
+ +H+N++ LLG C + ++ E+ +L ++ ++P + E +
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQL 147
Query: 341 TWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMD 399
+ + +ARG+ YL + + IHRDL A N+L+ + KI+DFG+AR + +D
Sbjct: 148 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 400 QTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
TN + +MAPE + ++ +SD++SFGVL+ EI +
Sbjct: 205 YYKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 111/224 (49%), Gaps = 28/224 (12%)
Query: 244 DNFSDANKLGQGGFGAVY--------KGMLSNGETIAVKRLSKNSKQGEI-EFKNEVLLL 294
D LG+G FG V K + +AVK L ++ + ++ + +E+ ++
Sbjct: 20 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 79
Query: 295 ARL-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI-----------FDPIN--REHM 340
+ +H+N++ LLG C + ++ E+ +L ++ ++P + E +
Sbjct: 80 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 139
Query: 341 TWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMD 399
+ + +ARG+ YL + + IHRDL A N+L+ + KI+DFG+AR + +D
Sbjct: 140 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 196
Query: 400 QTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
TN + +MAPE + ++ +SD++SFGVL+ EI +
Sbjct: 197 YYKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 111/224 (49%), Gaps = 28/224 (12%)
Query: 244 DNFSDANKLGQGGFGAVY--------KGMLSNGETIAVKRLSKNSKQGEI-EFKNEVLLL 294
D LG+G FG V K + +AVK L ++ + ++ + +E+ ++
Sbjct: 17 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 76
Query: 295 ARL-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI-----------FDPIN--REHM 340
+ +H+N++ LLG C + ++ E+ +L ++ ++P + E +
Sbjct: 77 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 136
Query: 341 TWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMD 399
+ + +ARG+ YL + + IHRDL A N+L+ + KI+DFG+AR + +D
Sbjct: 137 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 193
Query: 400 QTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
TN + +MAPE + ++ +SD++SFGVL+ EI +
Sbjct: 194 YYKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 244 DNFSDANKLGQGGFGA-VYKGMLSNGETIAVKRLSKNS--KQGEIEF-KNEVLLLARLQH 299
++F LG+G F V L+ A+K L K K+ ++ + E +++RL H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 300 RNLVRLLGFCLERKERILV-YEFVPNASLDHFI-----FDPINREHMTWEKRYKIIEGIA 353
V+L F + E++ + N L +I FD T E I
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 140
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
L YLH IIHRDLK NILL+ +M+ +I+DFG A++ + + N VGT
Sbjct: 141 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + SD+++ G ++ ++V+G
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 111/224 (49%), Gaps = 28/224 (12%)
Query: 244 DNFSDANKLGQGGFGAVY--------KGMLSNGETIAVKRLSKNSKQGEI-EFKNEVLLL 294
D LG+G FG V K + +AVK L ++ + ++ + +E+ ++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 295 ARL-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI-----------FDPIN--REHM 340
+ +H+N++ LLG C + ++ E+ +L ++ ++P + E +
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 147
Query: 341 TWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMD 399
+ + +ARG+ YL + + IHRDL A N+L+ + KI+DFG+AR + +D
Sbjct: 148 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 400 QTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
TN + +MAPE + ++ +SD++SFGVL+ EI +
Sbjct: 205 YYKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 17/230 (7%)
Query: 244 DNFSDANKLGQGGFGAVYK-GMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNL 302
D++ +LG G FG V++ + G A K + + + + E+ ++ L+H L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREH--MTWEKRYKIIEGIARGLLYLH 360
V L + E +++YEF+ L F+ + EH M+ ++ + + + +GL ++H
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGEL----FEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 272
Query: 361 EDSRLRIIHRDLKASNILLDSEMNP--KISDFGMARLFEMDQTHSDTNRVVGTFGYMAPE 418
E++ +H DLK NI+ ++ + K+ DFG+ + Q+ GT + APE
Sbjct: 273 ENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS---VKVTTGTAEFAAPE 326
Query: 419 YVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWN 468
+D++S GVL ++SG S FG E + E L +WN
Sbjct: 327 VAEGKPVGYYTDMWSVGVLSYILLSGL--SPFGGENDDETLRNVKSCDWN 374
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNS--KQGEIEF-KNEVLLLARLQH 299
++F LG+G F V L+ A+K L K K+ ++ + E +++RL H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 300 RNLVRLLGFCLERKERILV-YEFVPNASLDHFI-----FDPINREHMTWEKRYKIIEGIA 353
V+L F + E++ + N L +I FD T E I
Sbjct: 74 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 124
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
L YLH IIHRDLK NILL+ +M+ +I+DFG A++ + + N VGT
Sbjct: 125 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 181
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + SD+++ G ++ ++V+G
Sbjct: 182 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 10/200 (5%)
Query: 252 LGQGGFGAVYK-GMLSNGETIAVKRLSKNS-KQGEIE-FKNEVLLLARLQHRNLVRLLGF 308
+G G +G K S+G+ + K L S + E + +EV LL L+H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 309 CLERKERIL--VYEFVPNASLDHFIFDPIN-REHMTWEKRYKIIEGIARGLLYLHE--DS 363
++R L V E+ L I R+++ E +++ + L H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHG 423
++HRDLK +N+ LD + N K+ DFG+AR+ D + + VGT YM+PE +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKA--FVGTPYYMSPEQMNRM 191
Query: 424 RFSVKSDIFSFGVLVLEIVS 443
++ KSDI+S G L+ E+ +
Sbjct: 192 SYNEKSDIWSLGCLLYELCA 211
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 10/200 (5%)
Query: 252 LGQGGFGAVYK-GMLSNGETIAVKRLSKNS-KQGEIE-FKNEVLLLARLQHRNLVRLLGF 308
+G G +G K S+G+ + K L S + E + +EV LL L+H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 309 CLERKERIL--VYEFVPNASLDHFIFDPIN-REHMTWEKRYKIIEGIARGLLYLHE--DS 363
++R L V E+ L I R+++ E +++ + L H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHG 423
++HRDLK +N+ LD + N K+ DFG+AR+ D+ + VGT YM+PE +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFA--KEFVGTPYYMSPEQMNRM 191
Query: 424 RFSVKSDIFSFGVLVLEIVS 443
++ KSDI+S G L+ E+ +
Sbjct: 192 SYNEKSDIWSLGCLLYELCA 211
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNS--KQGEIEF-KNEVLLLARLQH 299
++F LG+G F V L+ A+K L K K+ ++ + E +++RL H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 300 RNLVRLLGFCLERKERILV-YEFVPNASLDHFI-----FDPINREHMTWEKRYKIIEGIA 353
V+L F + E++ + N L +I FD T E I
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 139
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
L YLH IIHRDLK NILL+ +M+ +I+DFG A++ + + N VGT
Sbjct: 140 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 196
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + SD+++ G ++ ++V+G
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNS--KQGEIEF-KNEVLLLARLQH 299
++F LG+G F V L+ A+K L K K+ ++ + E +++RL H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 300 RNLVRLLGFCLERKERILV-YEFVPNASLDHFI-----FDPINREHMTWEKRYKIIEGIA 353
V+L F + E++ + N L +I FD T E I
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 139
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
L YLH IIHRDLK NILL+ +M+ +I+DFG A++ + + N VGT
Sbjct: 140 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 196
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + SD+++ G ++ ++V+G
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 104/210 (49%), Gaps = 19/210 (9%)
Query: 243 TDNFSDANKLGQGGFGAVY--KGMLSNGETIA--VKRLSKNSKQGEIEFKNEVLLLARLQ 298
+D + KLG G +G V K L+ E +K+ S + +EV +L +L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPIN-REHMTWEKRYKIIEGIARGLL 357
H N+++L F +++ LV E L FD I R+ + I++ + G
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAVIMKQVLSGTT 118
Query: 358 YLHEDSRLRIIHRDLKASNILLDSEMNP---KISDFGMARLFEMDQTHSDTNRVVGTFGY 414
YLH+ + I+HRDLK N+LL+S+ KI DFG++ FE+ +GT Y
Sbjct: 119 YLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG---GKMKERLGTAYY 172
Query: 415 MAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+APE V+ ++ K D++S GV++ ++ G
Sbjct: 173 IAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 22/219 (10%)
Query: 244 DNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQGEIE-FKNEVLLLAR 296
+N LG G FG V + G +AVK L + E E +E+ +++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 297 L-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI--------FDP---INREHMTWEK 344
L QH N+V LLG C +++ E+ L +F+ DP I +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 345 RYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD 404
+A+G+ +L + IHRD+ A N+LL + KI DFG+AR D +
Sbjct: 166 LLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 405 TNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
+MAPE + ++V+SD++S+G+L+ EI S
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 243 TDNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLAR 296
+DN+ +LG+G F V + G+ + I K+LS Q + + E + +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 61
Query: 297 LQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGL 356
LQH N+VRL E LV++ V L D + RE + I+ I +
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESI 118
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMN---PKISDFGMARLFEMDQTHSDTNRVVGTFG 413
Y H + I+HR+LK N+LL S+ K++DFG+A E++ + + + GT G
Sbjct: 119 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEA-WHGFAGTPG 172
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + +S DI++ GV++ ++ G
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 243 TDNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLAR 296
+DN+ +LG+G F V + G+ + I K+LS Q + + E + +
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 60
Query: 297 LQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGL 356
LQH N+VRL E LV++ V L D + RE + I+ I +
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESI 117
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMN---PKISDFGMARLFEMDQTHSDTNRVVGTFG 413
Y H + I+HR+LK N+LL S+ K++DFG+A E++ + + + GT G
Sbjct: 118 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEA-WHGFAGTPG 171
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + +S DI++ GV++ ++ G
Sbjct: 172 YLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 17/230 (7%)
Query: 244 DNFSDANKLGQGGFGAVYK-GMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNL 302
D++ +LG G FG V++ + G A K + + + + E+ ++ L+H L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREH--MTWEKRYKIIEGIARGLLYLH 360
V L + E +++YEF+ L F+ + EH M+ ++ + + + +GL ++H
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGEL----FEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 166
Query: 361 EDSRLRIIHRDLKASNILLDSEMNP--KISDFGMARLFEMDQTHSDTNRVVGTFGYMAPE 418
E++ +H DLK NI+ ++ + K+ DFG+ + Q+ GT + APE
Sbjct: 167 ENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS---VKVTTGTAEFAAPE 220
Query: 419 YVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWN 468
+D++S GVL ++SG S FG E + E L +WN
Sbjct: 221 VAEGKPVGYYTDMWSVGVLSYILLSGL--SPFGGENDDETLRNVKSCDWN 268
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 14/212 (6%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEI-EFKNEVLLLARLQHRN 301
D++ +G G V + E +A+KR++ Q + E E+ +++ H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 302 LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINR-EHMTWEKRYKIIEGIAR----GL 356
+V + + E LV + + S+ I + + EH + I I R GL
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEM--DQTHSDTNRV-VGTFG 413
YLH++ + IHRD+KA NILL + + +I+DFG++ D T + + VGT
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSG 444
+MAPE + R + K+DI+SFG+ +E+ +G
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 243 TDNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLAR 296
+DN+ +LG+G F V + G+ + I K+LS Q + + E + +
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 84
Query: 297 LQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGL 356
LQH N+VRL E LV++ V L D + RE + I+ I +
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESI 141
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNP---KISDFGMARLFEMDQTHSDTNRVVGTFG 413
Y H + I+HR+LK N+LL S+ K++DFG+A E++ + + + GT G
Sbjct: 142 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEA-WHGFAGTPG 195
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + +S DI++ GV++ ++ G
Sbjct: 196 YLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVK---RLSKNSKQGEI--EFKNEVLLLARLQHRNLVRLL 306
+G+G FG V++G+ + E A+ + KN + +F E L + + H ++V+L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
G E I++ E L F+ + + + ++ L YL R
Sbjct: 106 GVITENPVWIIM-ELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 159
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFS 426
+HRD+ A N+L+ S K+ DFG++R E D T+ ++ +MAPE + RF+
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFT 218
Query: 427 VKSDIFSFGVLVLEIV 442
SD++ FGV + EI+
Sbjct: 219 SASDVWMFGVCMWEIL 234
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 243 TDNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLAR 296
+DN+ +LG+G F V + G+ + I K+LS Q + + E + +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 61
Query: 297 LQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGL 356
LQH N+VRL E LV++ V L D + RE + I+ I +
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESI 118
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMN---PKISDFGMARLFEMDQTHSDTNRVVGTFG 413
Y H + I+HR+LK N+LL S+ K++DFG+A E++ + + + GT G
Sbjct: 119 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEA-WHGFAGTPG 172
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + +S DI++ GV++ ++ G
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVK---RLSKNSKQGEI--EFKNEVLLLARLQHRNLVRLL 306
+G+G FG V++G+ + E A+ + KN + +F E L + + H ++V+L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
G E I++ E L F+ + + + ++ L YL R
Sbjct: 83 GVITENPVWIIM-ELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 136
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFS 426
+HRD+ A N+L+ S K+ DFG++R E D T+ ++ +MAPE + RF+
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFT 195
Query: 427 VKSDIFSFGVLVLEIV 442
SD++ FGV + EI+
Sbjct: 196 SASDVWMFGVCMWEIL 211
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVK---RLSKNSKQGEI--EFKNEVLLLARLQHRNLVRLL 306
+G+G FG V++G+ + E A+ + KN + +F E L + + H ++V+L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
G E I++ E L F+ + + + ++ L YL R
Sbjct: 80 GVITENPVWIIM-ELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 133
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFS 426
+HRD+ A N+L+ S K+ DFG++R E D T+ ++ +MAPE + RF+
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFT 192
Query: 427 VKSDIFSFGVLVLEIV 442
SD++ FGV + EI+
Sbjct: 193 SASDVWMFGVCMWEIL 208
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 14/212 (6%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEI-EFKNEVLLLARLQHRN 301
D++ +G G V + E +A+KR++ Q + E E+ +++ H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 302 LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINR-EHMTWEKRYKIIEGIAR----GL 356
+V + + E LV + + S+ I + + EH + I I R GL
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEM--DQTHSDTNRV-VGTFG 413
YLH++ + IHRD+KA NILL + + +I+DFG++ D T + + VGT
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSG 444
+MAPE + R + K+DI+SFG+ +E+ +G
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVK---RLSKNSKQGEI--EFKNEVLLLARLQHRNLVRLL 306
+G+G FG V++G+ + E A+ + KN + +F E L + + H ++V+L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
G E I++ E L F+ + + + ++ L YL R
Sbjct: 81 GVITENPVWIIM-ELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 134
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFS 426
+HRD+ A N+L+ S K+ DFG++R E D T+ ++ +MAPE + RF+
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFT 193
Query: 427 VKSDIFSFGVLVLEIV 442
SD++ FGV + EI+
Sbjct: 194 SASDVWMFGVCMWEIL 209
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVK---RLSKNSKQGEI--EFKNEVLLLARLQHRNLVRLL 306
+G+G FG V++G+ + E A+ + KN + +F E L + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
G E I++ E L F+ + + + ++ L YL R
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFS 426
+HRD+ A N+L+ S K+ DFG++R E D T+ ++ +MAPE + RF+
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 427 VKSDIFSFGVLVLEIV 442
SD++ FGV + EI+
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVK---RLSKNSKQGEI--EFKNEVLLLARLQHRNLVRLL 306
+G+G FG V++G+ + E A+ + KN + +F E L + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
G E I++ E L F+ + + + ++ L YL R
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFS 426
+HRD+ A N+L+ S K+ DFG++R E D T+ ++ +MAPE + RF+
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 427 VKSDIFSFGVLVLEIV 442
SD++ FGV + EI+
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 110/225 (48%), Gaps = 17/225 (7%)
Query: 239 IRVATDNFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNS--KQGEIE---FKNEVL 292
I++ ++F LG+G FG V+ + A+K L K+ ++E + VL
Sbjct: 13 IKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 72
Query: 293 LLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGI 352
LA +H L + ++ V E++ L + I ++ ++ Y I
Sbjct: 73 SLA-WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI-QSCHKFDLSRATFYAA--EI 128
Query: 353 ARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF 412
GL +LH I++RDLK NILLD + + KI+DFGM + E + TN GT
Sbjct: 129 ILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNEFCGTP 183
Query: 413 GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETE 457
Y+APE ++ +++ D +SFGVL+ E++ GQ S F ++E E
Sbjct: 184 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQDEEE 226
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVK---RLSKNSKQGEI--EFKNEVLLLARLQHRNLVRLL 306
+G+G FG V++G+ + E A+ + KN + +F E L + + H ++V+L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
G E I++ E L F+ + + + ++ L YL R
Sbjct: 75 GVITENPVWIIM-ELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 128
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFS 426
+HRD+ A N+L+ S K+ DFG++R E D T+ ++ +MAPE + RF+
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 427 VKSDIFSFGVLVLEIV 442
SD++ FGV + EI+
Sbjct: 188 SASDVWMFGVCMWEIL 203
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELR 73
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 129
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 130 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 180
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELR 93
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 94 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 149
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 150 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 200
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 201 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 106/204 (51%), Gaps = 7/204 (3%)
Query: 246 FSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQHRNLV 303
+++ + +G+G +G V + N +A+K++S Q + E+ +L +H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 304 RLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
+ + ++ ++ ++ + +H++ + + I RGL Y+H +
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 146
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD-TNRVVGTFGYMAPEYVMH 422
++HRDLK SN+LL++ + KI DFG+AR+ + D H+ V T Y APE +++
Sbjct: 147 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 423 GRFSVKS-DIFSFGVLVLEIVSGQ 445
+ KS DI+S G ++ E++S +
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 73
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYK 347
LL ++H N++ LL LE + + + A L++ + + +T +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KXQKLTDDHVQF 129
Query: 348 IIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR 407
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTG 181
Query: 408 VVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELR 92
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 93 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 148
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 149 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 199
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 200 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LSK Q I K E+
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSK-PFQSIIHAKRTYRELR 85
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 86 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 141
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 142 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 192
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 193 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELR 69
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 70 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 125
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 126 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 176
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 94/199 (47%), Gaps = 16/199 (8%)
Query: 252 LGQGGFG-AVYKGMLSNGETIAVKRLSKNSKQG-EIEFKNEVLLLARLQHRNLVRLLGFC 309
LG G F V + G+ AVK + K + +G E +NE+ +L +++H N+V L
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIY 89
Query: 310 LERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYK-IIEGIARGLLYLHEDSRLRII 368
LV + V L FD I + EK +I + + YLH R+ I+
Sbjct: 90 ESPNHLYLVMQLVSGGEL----FDRIVEKGFYTEKDASTLIRQVLDAVYYLH---RMGIV 142
Query: 369 HRDLKASNILL---DSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRF 425
HRDLK N+L D E ISDFG+++ M+ + GT GY+APE + +
Sbjct: 143 HRDLKPENLLYYSQDEESKIMISDFGLSK---MEGKGDVMSTACGTPGYVAPEVLAQKPY 199
Query: 426 SVKSDIFSFGVLVLEIVSG 444
S D +S GV+ ++ G
Sbjct: 200 SKAVDCWSIGVIAYILLCG 218
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 73
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 129
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 130 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 180
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 181 GYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELR 93
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 94 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 149
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 150 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMX 200
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 201 GXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 73
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYK 347
LL ++H N++ LL LE + + + A L++ + + +T +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KXQKLTDDHVQF 129
Query: 348 IIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR 407
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTG 181
Query: 408 VVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELR 73
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 129
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 130 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMA 180
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 181 GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELR 79
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 80 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 135
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 136 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 186
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 106/204 (51%), Gaps = 7/204 (3%)
Query: 246 FSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQHRNLV 303
+++ + +G+G +G V + N +A+K++S Q + E+ +L +H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 304 RLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
+ + ++ ++ ++ + +H++ + + I RGL Y+H +
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 146
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD-TNRVVGTFGYMAPEYVMH 422
++HRDLK SN+LL++ + KI DFG+AR+ + D H+ V T Y APE +++
Sbjct: 147 ---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 423 GRFSVKS-DIFSFGVLVLEIVSGQ 445
+ KS DI+S G ++ E++S +
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELR 69
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 70 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQF---- 125
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 126 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 176
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 25 KTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELR 83
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 84 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 139
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 140 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 190
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 191 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 99/199 (49%), Gaps = 18/199 (9%)
Query: 252 LGQGGFGAVY--KGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
LG G F V+ K L+ G+ A+K + K+ + +NE+ +L +++H N+V L
Sbjct: 17 LGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 310 LERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYK-IIEGIARGLLYLHEDSRLRII 368
LV + V L FD I + EK +I+ + + YLHE+ I+
Sbjct: 76 ESTTHYYLVMQLVSGGEL----FDRILERGVYTEKDASLVIQQVLSAVKYLHENG---IV 128
Query: 369 HRDLKASNIL-LDSEMNPK--ISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRF 425
HRDLK N+L L E N K I+DFG++++ + + + GT GY+APE + +
Sbjct: 129 HRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVLAQKPY 184
Query: 426 SVKSDIFSFGVLVLEIVSG 444
S D +S GV+ ++ G
Sbjct: 185 SKAVDCWSIGVITYILLCG 203
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 11/204 (5%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEI--EFKNEVLLLARLQHRN 301
D+F ++LG G G V K I ++L + I + E+ +L
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 302 LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHE 361
+V G E + E + SLD + + + + E K+ + RGL YL E
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEA---KRIPEEILGKVSIAVLRGLAYLRE 132
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVM 421
+ +I+HRD+K SNIL++S K+ DFG++ S N VGT YMAPE +
Sbjct: 133 --KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMAPERLQ 186
Query: 422 HGRFSVKSDIFSFGVLVLEIVSGQ 445
+SV+SDI+S G+ ++E+ G+
Sbjct: 187 GTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELR 73
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 129
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 130 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMA 180
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 181 GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELR 69
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYK 347
LL ++H N++ LL LE + + + A L++ + + +T +
Sbjct: 70 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQF 125
Query: 348 IIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR 407
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 126 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAG 177
Query: 408 VVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 178 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 20 KTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 78
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 79 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 134
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 135 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMT 185
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 25/213 (11%)
Query: 245 NFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNSKQGEIEFKN-EVLLLARLQHRNL 302
+++D +G G FG VY+ L + GE +A+K++ ++ + FKN E+ ++ +L H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNI 109
Query: 303 VRLLGFCL---ERKERI---LVYEFVPNASLDHFIFDPINREHMTWEKRYK--IIEGIAR 354
VRL F E+K+ + LV ++VP + + +R T Y + + R
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFG 413
L Y+H I HRD+K N+LLD + K+ DFG A+ ++ + + + + +
Sbjct: 168 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY- 221
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQ 445
Y APE + ++ D++S G ++ E++ GQ
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 110/225 (48%), Gaps = 17/225 (7%)
Query: 239 IRVATDNFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNS--KQGEIE---FKNEVL 292
I++ ++F LG+G FG V+ + A+K L K+ ++E + VL
Sbjct: 12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 71
Query: 293 LLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGI 352
LA +H L + ++ V E++ L + I ++ ++ Y I
Sbjct: 72 SLA-WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI-QSCHKFDLSRATFYA--AEI 127
Query: 353 ARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF 412
GL +LH I++RDLK NILLD + + KI+DFGM + E + TN GT
Sbjct: 128 ILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNXFCGTP 182
Query: 413 GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETE 457
Y+APE ++ +++ D +SFGVL+ E++ GQ S F ++E E
Sbjct: 183 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQDEEE 225
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 20/215 (9%)
Query: 238 TIRVATDNFSDANKLGQGGFGAVYK-GMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLAR 296
++ V D+ +LG+G +G V K + +G+ +AVKR+ E + +L+
Sbjct: 1 SMEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE---QKRLLMDLD 57
Query: 297 LQHRNL-----VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRY-KIIE 350
+ R + V G + + E + + SLD F I++ E KI
Sbjct: 58 ISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAV 116
Query: 351 GIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVG 410
I + L +LH S+L +IHRD+K SN+L+++ K+ DFG++ + +D D + G
Sbjct: 117 SIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISG-YLVDDVAKDID--AG 171
Query: 411 TFGYMAPEYV----MHGRFSVKSDIFSFGVLVLEI 441
YMAPE + +SVKSDI+S G+ ++E+
Sbjct: 172 CKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 25/213 (11%)
Query: 245 NFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNSKQGEIEFKN-EVLLLARLQHRNL 302
+++D +G G FG VY+ L + GE +A+K++ ++ + FKN E+ ++ +L H N+
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNI 103
Query: 303 VRLLGFCL---ERKERI---LVYEFVPNASLDHFIFDPINREHMTWEKRYK--IIEGIAR 354
VRL F E+K+ + LV ++VP + + +R T Y + + R
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 161
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFG 413
L Y+H I HRD+K N+LLD + K+ DFG A+ ++ + + + + +
Sbjct: 162 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY- 215
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQ 445
Y APE + ++ D++S G ++ E++ GQ
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 25/213 (11%)
Query: 245 NFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNSKQGEIEFKN-EVLLLARLQHRNL 302
+++D +G G FG VY+ L + GE +A+K++ ++ + FKN E+ ++ +L H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNI 109
Query: 303 VRLLGFCL---ERKERI---LVYEFVPNASLDHFIFDPINREHMTWEKRYK--IIEGIAR 354
VRL F E+K+ + LV ++VP + + +R T Y + + R
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFG 413
L Y+H I HRD+K N+LLD + K+ DFG A+ ++ + + + + +
Sbjct: 168 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY- 221
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQ 445
Y APE + ++ D++S G ++ E++ GQ
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 25/213 (11%)
Query: 245 NFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNSKQGEIEFKN-EVLLLARLQHRNL 302
+++D +G G FG VY+ L + GE +A+K++ ++ + FKN E+ ++ +L H N+
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNI 111
Query: 303 VRLLGFCL---ERKERI---LVYEFVPNASLDHFIFDPINREHMTWEKRYK--IIEGIAR 354
VRL F E+K+ + LV ++VP + + +R T Y + + R
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 169
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFG 413
L Y+H I HRD+K N+LLD + K+ DFG A+ ++ + + + + +
Sbjct: 170 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY- 223
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQ 445
Y APE + ++ D++S G ++ E++ GQ
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 84
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 85 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 140
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 141 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMT 191
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 192 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 80
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 81 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 136
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 137 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 187
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 73
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 129
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 130 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 180
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 75
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 76 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 131
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 132 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 182
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 78
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 79 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 134
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 135 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMT 185
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 25/213 (11%)
Query: 245 NFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNSKQGEIEFKN-EVLLLARLQHRNL 302
+++D +G G FG VY+ L + GE +A+K++ ++ + FKN E+ ++ +L H N+
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNI 113
Query: 303 VRLLGFCL---ERKERI---LVYEFVPNASLDHFIFDPINREHMTWEKRYK--IIEGIAR 354
VRL F E+K+ + LV ++VP + + +R T Y + + R
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 171
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFG 413
L Y+H I HRD+K N+LLD + K+ DFG A+ ++ + + + + +
Sbjct: 172 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY- 225
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQ 445
Y APE + ++ D++S G ++ E++ GQ
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 73
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 129
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 130 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 180
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 11/215 (5%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGE-IEFKNEVLLLARLQHRN 301
+ + +KLG+G + VYKG +A+K + ++G EV LL L+H N
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN 61
Query: 302 LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHE 361
+V L K LV+E++ + L ++ D N +M K + + + RGL Y H
Sbjct: 62 IVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLF--LFQLLRGLAYCH- 117
Query: 362 DSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVM 421
R +++HRDLK N+L++ K++DFG+AR + T + N VV T Y P+ ++
Sbjct: 118 --RQKVLHRDLKPQNLLINERGELKLADFGLARAKSI-PTKTYDNEVV-TLWYRPPDILL 173
Query: 422 HGR-FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEE 455
+S + D++ G + E+ +G+ T EE
Sbjct: 174 GSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE 208
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 13 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 71
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 72 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 127
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 128 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 178
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 179 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 80
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 81 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 136
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 137 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMT 187
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 73
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 129
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 130 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 180
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 80
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 81 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 136
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 137 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMT 187
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 78
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 79 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 134
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 135 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 185
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 14 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 72
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 73 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 128
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 129 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 179
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 180 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 85
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 86 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 141
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 142 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 192
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 193 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 85
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 86 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 141
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 142 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 192
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 193 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 73
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 129
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 130 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 180
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 181 GXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 73
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 129
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 130 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 180
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 75
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 76 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 131
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 132 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 182
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 73
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 129
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 130 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 180
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 80
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 81 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 136
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 137 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMT 187
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 84
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 85 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 140
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 141 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 191
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 192 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 93
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 94 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 149
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 150 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 200
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 201 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 75
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 76 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 131
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 132 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 182
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 73
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 129
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 130 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 180
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 79
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 80 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 135
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 136 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 186
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 92
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 93 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 148
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 149 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 199
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 200 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 73
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 129
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 130 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 180
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 96
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 97 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 152
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 153 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 203
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 204 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 69
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 70 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 125
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 126 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 176
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 70
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 71 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 126
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 127 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 177
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 178 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 12/196 (6%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVK---RLSKNSKQGEI--EFKNEVLLLARLQHRNLVRLL 306
+G+G FG V++G+ + E A+ + KN + +F E L + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
G E I++ E L F+ + + + ++ L YL R
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFS 426
+HRD+ A N+L+ S K+ DFG++R E D T ++ +MAPE + RF+
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKASKGKLPIKWMAPESINFRRFT 190
Query: 427 VKSDIFSFGVLVLEIV 442
SD++ FGV + EI+
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 78
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 79 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 134
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 135 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 185
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 25/213 (11%)
Query: 245 NFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNSKQGEIEFKN-EVLLLARLQHRNL 302
+++D +G G FG VY+ L + GE +A+K++ ++ + FKN E+ ++ +L H N+
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNI 154
Query: 303 VRLLGFCL---ERKERI---LVYEFVPNASLDHFIFDPINREHMTWEKRYK--IIEGIAR 354
VRL F E+K+ + LV ++VP + + +R T Y + + R
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 212
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFG 413
L Y+H I HRD+K N+LLD + K+ DFG A+ ++ + + + + +
Sbjct: 213 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY- 266
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQ 445
Y APE + ++ D++S G ++ E++ GQ
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 70
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 71 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 126
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 127 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 177
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 178 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 75
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 76 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 131
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 132 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMT 182
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 120/240 (50%), Gaps = 24/240 (10%)
Query: 241 VATDNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQG--EIEFKNEVL 292
+ D++ +LG G F V K G + I +RLS +S++G E + EV
Sbjct: 2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLS-SSRRGVSREEIEREVN 60
Query: 293 LLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGI 352
+L ++H N++ L + + +L+ E V L F+ + +E +T ++ + ++ I
Sbjct: 61 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE---KESLTEDEATQFLKQI 117
Query: 353 ARGLLYLHEDSRLRIIHRDLKASNI-LLDSEM-NPKIS--DFGMARLFEMDQTHSDTNRV 408
G+ YLH RI H DLK NI LLD + NP+I DFG+A E ++ +
Sbjct: 118 LDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE---AGNEFKNI 171
Query: 409 VGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWN 468
GT ++APE V + +++D++S GV+ ++SG S F E + E L + N++
Sbjct: 172 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA--SPFLGETKQETLTNISAVNYD 229
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 25/213 (11%)
Query: 245 NFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNSKQGEIEFKN-EVLLLARLQHRNL 302
+++D +G G FG VY+ L + GE +A+K++ ++ + FKN E+ ++ +L H N+
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNI 80
Query: 303 VRLLGFCL---ERKERI---LVYEFVPNASLDHFIFDPINREHMTWEKRYK--IIEGIAR 354
VRL F E+K+ + LV ++VP + + +R T Y + + R
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 138
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFG 413
L Y+H I HRD+K N+LLD + K+ DFG A+ ++ + + + + +
Sbjct: 139 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY- 192
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQ 445
Y APE + ++ D++S G ++ E++ GQ
Sbjct: 193 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 96
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 97 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 152
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 153 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMX 203
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 204 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 25/213 (11%)
Query: 245 NFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNSKQGEIEFKN-EVLLLARLQHRNL 302
+++D +G G FG VY+ L + GE +A+K++ ++ + FKN E+ ++ +L H N+
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNI 83
Query: 303 VRLLGFCL---ERKERI---LVYEFVPNASLDHFIFDPINREHMTWEKRYK--IIEGIAR 354
VRL F E+K+ + LV ++VP + + +R T Y + + R
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 141
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFG 413
L Y+H I HRD+K N+LLD + K+ DFG A+ ++ + + + + +
Sbjct: 142 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY- 195
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQ 445
Y APE + ++ D++S G ++ E++ GQ
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 79
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 80 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 135
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 136 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMT 186
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 25/213 (11%)
Query: 245 NFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNSKQGEIEFKN-EVLLLARLQHRNL 302
+++D +G G FG VY+ L + GE +A+K++ ++ + FKN E+ ++ +L H N+
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNI 94
Query: 303 VRLLGFCL---ERKERI---LVYEFVPNASLDHFIFDPINREHMTWEKRYK--IIEGIAR 354
VRL F E+K+ + LV ++VP + + +R T Y + + R
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 152
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFG 413
L Y+H I HRD+K N+LLD + K+ DFG A+ ++ + + + + +
Sbjct: 153 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY- 206
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQ 445
Y APE + ++ D++S G ++ E++ GQ
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 109/232 (46%), Gaps = 33/232 (14%)
Query: 240 RVATDNFSDANKLGQGGFGAVYKGMLS----NGETIAVKRLSKNS--KQGEIEFKN-EVL 292
R+ +F+ LG+G FG V MLS E AVK L K+ + ++E E
Sbjct: 337 RMKLTDFNFLMVLGKGSFGKV---MLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKR 393
Query: 293 LLARLQHRNLVRLLGFCLERKERI-LVYEFVPNASLDHFIFDPINREHMTWEKRYK---- 347
+LA + L C + +R+ V E+V L + H+ R+K
Sbjct: 394 VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMY---------HIQQVGRFKEPHA 444
Query: 348 --IIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDT 405
IA GL +L II+RDLK N++LDSE + KI+DFGM + D T
Sbjct: 445 VFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV--TT 499
Query: 406 NRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETE 457
GT Y+APE + + + D ++FGVL+ E+++GQ + F E+E E
Sbjct: 500 KXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ--APFEGEDEDE 549
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 25/213 (11%)
Query: 245 NFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNSKQGEIEFKN-EVLLLARLQHRNL 302
+++D +G G FG VY+ L + GE +A+K++ ++ + FKN E+ ++ +L H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNI 87
Query: 303 VRLLGFCL---ERKERI---LVYEFVPNASLDHFIFDPINREHMTWEKRYK--IIEGIAR 354
VRL F E+K+ + LV ++VP + + +R T Y + + R
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFG 413
L Y+H I HRD+K N+LLD + K+ DFG A+ ++ + + + + +
Sbjct: 146 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY- 199
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQ 445
Y APE + ++ D++S G ++ E++ GQ
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 252 LGQGGFGAVYK-GMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCL 310
LG G FG V+K + G +A K + + + E KNE+ ++ +L H NL++L
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE 156
Query: 311 ERKERILVYEFVPNASLDHFIFDPINRE--HMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
+ + +LV E+V L FD I E ++T ++ I G+ ++H+ + I+
Sbjct: 157 SKNDIVLVMEYVDGGEL----FDRIIDESYNLTELDTILFMKQICEGIRHMHQ---MYIL 209
Query: 369 HRDLKASNILL--DSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFS 426
H DLK NIL KI DFG+AR + + GT ++APE V + S
Sbjct: 210 HLDLKPENILCVNRDAKQIKIIDFGLARRY---KPREKLKVNFGTPEFLAPEVVNYDFVS 266
Query: 427 VKSDIFSFGVLVLEIVSG 444
+D++S GV+ ++SG
Sbjct: 267 FPTDMWSVGVIAYMLLSG 284
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 25/213 (11%)
Query: 245 NFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNSKQGEIEFKN-EVLLLARLQHRNL 302
+++D +G G FG VY+ L + GE +A+K++ ++ + FKN E+ ++ +L H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNI 87
Query: 303 VRLLGFCL---ERKERI---LVYEFVPNASLDHFIFDPINREHMTWEKRYK--IIEGIAR 354
VRL F E+K+ + LV ++VP + + +R T Y + + R
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFG 413
L Y+H I HRD+K N+LLD + K+ DFG A+ ++ + + + + +
Sbjct: 146 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY- 199
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQ 445
Y APE + ++ D++S G ++ E++ GQ
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVK---RLSKNSKQGEI--EFKNEVLLLARLQHRNLVRLL 306
+G+G FG V++G+ + E A+ + KN + +F E L + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
G E I++ E L F+ + + + ++ L YL R
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFS 426
+HRD+ A N+L+ + K+ DFG++R E D T+ ++ +MAPE + RF+
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 427 VKSDIFSFGVLVLEIV 442
SD++ FGV + EI+
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 25/213 (11%)
Query: 245 NFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNSKQGEIEFKN-EVLLLARLQHRNL 302
+++D +G G FG VY+ L + GE +A+K++ ++ + FKN E+ ++ +L H N+
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNI 88
Query: 303 VRLLGFCL---ERKERI---LVYEFVPNASLDHFIFDPINREHMTWEKRYK--IIEGIAR 354
VRL F E+K+ + LV ++VP + + +R T Y + + R
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 146
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFG 413
L Y+H I HRD+K N+LLD + K+ DFG A+ ++ + + + + +
Sbjct: 147 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY- 200
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQ 445
Y APE + ++ D++S G ++ E++ GQ
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 39/218 (17%)
Query: 246 FSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFKN---EVLLLARLQHRN 301
+ D +G G +GAV + G +A+K+L + Q E+ K E+ LL ++H N
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMRHEN 85
Query: 302 LVRLLGFCLERKERILVYEFVPNASLDHF-------------IFDPINREHMTWEKRYKI 348
++ LL F P+ +LD F + + E + ++ +
Sbjct: 86 VIGLLDV------------FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFL 133
Query: 349 IEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRV 408
+ + +GL Y+H IIHRDLK N+ ++ + KI DFG+AR Q S+
Sbjct: 134 VYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGX 185
Query: 409 VGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ R++ DI+S G ++ E+++G+
Sbjct: 186 VVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVK---RLSKNSKQGEI--EFKNEVLLLARLQHRNLVRLL 306
+G+G FG V++G+ + E A+ + KN + +F E L + + H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
G E I++ E L F+ + + + ++ L YL R
Sbjct: 458 GVITENPVWIIM-ELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFS 426
+HRD+ A N+L+ S K+ DFG++R E D T+ ++ +MAPE + RF+
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 427 VKSDIFSFGVLVLEIV 442
SD++ FGV + EI+
Sbjct: 571 SASDVWMFGVCMWEIL 586
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 18/201 (8%)
Query: 252 LGQGGFGAVYKGMLSNG----ETIAVKRLSKNSKQ--GEIEFKNEVLLLARLQHRNLVRL 305
LGQG FG V+ +G + A+K L K + + + K E +L + H +V+L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 306 -LGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGLLYLHEDS 363
F E K L+ +F+ L F +++E M E+ K + +A L +LH
Sbjct: 92 HYAFQTEGK-LYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALALDHLHS-- 144
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHG 423
L II+RDLK NILLD E + K++DFG+++ E GT YMAPE V
Sbjct: 145 -LGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 424 RFSVKSDIFSFGVLVLEIVSG 444
+ +D +SFGVL+ E+++G
Sbjct: 202 GHTQSADWWSFGVLMFEMLTG 222
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 119/237 (50%), Gaps = 24/237 (10%)
Query: 244 DNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQG--EIEFKNEVLLLA 295
D++ +LG G F V K G + I +RLS +S++G E + EV +L
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLS-SSRRGVSREEIEREVNILR 70
Query: 296 RLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARG 355
++H N++ L + + +L+ E V L F+ + +E +T ++ + ++ I G
Sbjct: 71 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE---KESLTEDEATQFLKQILDG 127
Query: 356 LLYLHEDSRLRIIHRDLKASNI-LLDSEM-NPKIS--DFGMARLFEMDQTHSDTNRVVGT 411
+ YLH RI H DLK NI LLD + NP+I DFG+A E ++ + GT
Sbjct: 128 VHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE---AGNEFKNIFGT 181
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWN 468
++APE V + +++D++S GV+ ++SG S F E + E L + N++
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA--SPFLGETKQETLTNISAVNYD 236
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 25/213 (11%)
Query: 245 NFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNSKQGEIEFKN-EVLLLARLQHRNL 302
+++D +G G FG VY+ L + GE +A+K++ ++ + FKN E+ ++ +L H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNI 75
Query: 303 VRLLGFCL---ERKERI---LVYEFVPNASLDHFIFDPINREHMTWEKRYK--IIEGIAR 354
VRL F E+K+ + LV ++VP + + +R T Y + + R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFG 413
L Y+H I HRD+K N+LLD + K+ DFG A+ ++ + + + + +
Sbjct: 134 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY- 187
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQ 445
Y APE + ++ D++S G ++ E++ GQ
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 245 NFSDANKLGQGGFGAVYKG-MLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHR 300
N+ +G+G F V + G+ +AVK + K NS + F+ EV ++ L H
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHP 66
Query: 301 NLVRLLGFCLERKERILVYEFVPNASL-DHFIFDPINREHMTWEKRYKIIEGIARGLLYL 359
N+V+L K LV E+ + D+ + +E K +I+ + Y
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQ----YC 122
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H+ I+HRDLKA N+LLD++MN KI+DFG + F + + G+ Y APE
Sbjct: 123 HQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG---NKLDTFCGSPPYAAPEL 176
Query: 420 VMHGRFS-VKSDIFSFGVLVLEIVSG 444
++ + D++S GV++ +VSG
Sbjct: 177 FQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 104/204 (50%), Gaps = 7/204 (3%)
Query: 246 FSDANKLGQGGFGAVYKGMLSNGET-IAVKRLSKNSKQGEIEFK-NEVLLLARLQHRNLV 303
++ +G+G +G V +T +A+K++S Q + E+ +L R +H N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 304 RLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
+ + ++ ++ ++ + + ++ + + I RGL Y+H +
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSAN 164
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD-TNRVVGTFGYMAPEYVMH 422
++HRDLK SN+L+++ + KI DFG+AR+ + + H+ V T Y APE +++
Sbjct: 165 ---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLN 221
Query: 423 GRFSVKS-DIFSFGVLVLEIVSGQ 445
+ KS DI+S G ++ E++S +
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 42/213 (19%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVLLLARLQHRNLVRLLG 307
+G G +G+V + +GE +A+K+LS+ Q EI K E+LLL +QH N++ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLD 90
Query: 308 FCLERKERILVYEFVPNASL----DHFIFDPINREHM--------TWEKRYKIIEGIARG 355
F P +SL D ++ P + + + EK ++ + +G
Sbjct: 91 V------------FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKG 138
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRV--VGTFG 413
L Y+H ++HRDLK N+ ++ + KI DFG+AR H+D V T
Sbjct: 139 LKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVVTRW 188
Query: 414 YMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
Y APE ++ ++ DI+S G ++ E+++G+
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 79
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 80 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 135
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+AR T +
Sbjct: 136 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMT 186
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 245 NFSDANKLGQGGFGAVYKG-MLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHR 300
N+ +G+G F V + G+ +AVK + K NS + F+ EV ++ L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHP 73
Query: 301 NLVRLLGFCLERKERILVYEFVPNASL-DHFIFDPINREHMTWEKRYKIIEGIARGLLYL 359
N+V+L K LV E+ + D+ + +E K +I+ + Y
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ----YC 129
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H+ I+HRDLKA N+LLD++MN KI+DFG + F + + G+ Y APE
Sbjct: 130 HQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG---NKLDTFCGSPPYAAPEL 183
Query: 420 VMHGRFS-VKSDIFSFGVLVLEIVSG 444
++ + D++S GV++ +VSG
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 25/213 (11%)
Query: 245 NFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNSKQGEIEFKN-EVLLLARLQHRNL 302
+++D +G G FG VY+ L + GE +A+K++ ++ + FKN E+ ++ +L H N+
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNI 76
Query: 303 VRLLGFCL---ERKERI---LVYEFVPNASLDHFIFDPINREHMTWEKRYK--IIEGIAR 354
VRL F E+K+ + LV ++VP + + +R T Y + + R
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 134
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFG 413
L Y+H I HRD+K N+LLD + K+ DFG A+ ++ + + + + +
Sbjct: 135 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY- 188
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQ 445
Y APE + ++ D++S G ++ E++ GQ
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 25/213 (11%)
Query: 245 NFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNSKQGEIEFKN-EVLLLARLQHRNL 302
+++D +G G FG VY+ L + GE +A+K++ ++ + FKN E+ ++ +L H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNI 75
Query: 303 VRLLGFCL---ERKERI---LVYEFVPNASLDHFIFDPINREHMTWEKRYK--IIEGIAR 354
VRL F E+K+ + LV ++VP + + +R T Y + + R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFG 413
L Y+H I HRD+K N+LLD + K+ DFG A+ ++ + + + + +
Sbjct: 134 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY- 187
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQ 445
Y APE + ++ D++S G ++ E++ GQ
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 25/213 (11%)
Query: 245 NFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNSKQGEIEFKN-EVLLLARLQHRNL 302
+++D +G G FG VY+ L + GE +A+K++ ++ + FKN E+ ++ +L H N+
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNI 79
Query: 303 VRLLGFCL---ERKERI---LVYEFVPNASLDHFIFDPINREHMTWEKRYK--IIEGIAR 354
VRL F E+K+ + LV ++VP + + +R T Y + + R
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 137
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFG 413
L Y+H I HRD+K N+LLD + K+ DFG A+ ++ + + + + +
Sbjct: 138 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY- 191
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQ 445
Y APE + ++ D++S G ++ E++ GQ
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 240 RVATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQ-----GEIEFKNEVLL 293
RV ++ + LG G FG V G G +AVK L++ + G+I + E+
Sbjct: 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKI--RREIQN 69
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKR-YKIIEGI 352
L +H ++++L + +V E+V L FD I + EK ++ + I
Sbjct: 70 LKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGEL----FDYICKNGRLDEKESRRLFQQI 125
Query: 353 ARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF 412
G+ Y H R ++HRDLK N+LLD+ MN KI+DFG++ + + G+
Sbjct: 126 LSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRXSCGSP 179
Query: 413 GYMAPEYVMHGRFSV--KSDIFSFGVLVLEIVSG 444
Y APE V+ GR + DI+S GV++ ++ G
Sbjct: 180 NYAAPE-VISGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 105/213 (49%), Gaps = 20/213 (9%)
Query: 240 RVATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQ-----GEIEFKNEVLL 293
RV ++ + LG G FG V G G +AVK L++ + G+I K E+
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKI--KREIQN 64
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
L +H ++++L + +V E+V L +I E M E R ++ + I
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM--EAR-RLFQQIL 121
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ Y H R ++HRDLK N+LLD+ MN KI+DFG++ + + D+ G+
Sbjct: 122 SAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS---CGSPN 175
Query: 414 YMAPEYVMHGRFSV--KSDIFSFGVLVLEIVSG 444
Y APE V+ GR + DI+S GV++ ++ G
Sbjct: 176 YAAPE-VISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 245 NFSDANKLGQGGFGAVYKG-MLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHR 300
N+ +G+G F V + G+ +AVK + K NS + F+ EV ++ L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHP 73
Query: 301 NLVRLLGFCLERKERILVYEFVPNASL-DHFIFDPINREHMTWEKRYKIIEGIARGLLYL 359
N+V+L K LV E+ + D+ + +E K +I+ + Y
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ----YC 129
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H+ I+HRDLKA N+LLD++MN KI+DFG + F + + G+ Y APE
Sbjct: 130 HQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG---NKLDTFCGSPPYAAPEL 183
Query: 420 VMHGRFS-VKSDIFSFGVLVLEIVSG 444
++ + D++S GV++ +VSG
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 110/223 (49%), Gaps = 34/223 (15%)
Query: 239 IRVATDNFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNS---KQGEIEFKNEVLLL 294
I + ++FS +G+GGFG VY ++ G+ A+K L K KQGE NE ++L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 295 ARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTW-----------E 343
+ + + ++ C+ Y F L FI D +N + + +
Sbjct: 244 SLVSTGDCPFIV--CMS-------YAFHTPDKLS-FILDLMNGGDLHYHLSQHGVFSEAD 293
Query: 344 KRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHS 403
R+ E I GL ++H +R +++RDLK +NILLD + +ISD G+A F + H+
Sbjct: 294 MRFYAAE-IILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA 349
Query: 404 DTNRVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
VGT GYMAPE + G + +D FS G ++ +++ G
Sbjct: 350 S----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 110/223 (49%), Gaps = 34/223 (15%)
Query: 239 IRVATDNFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNS---KQGEIEFKNEVLLL 294
I + ++FS +G+GGFG VY ++ G+ A+K L K KQGE NE ++L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 295 ARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTW-----------E 343
+ + + ++ C+ Y F L FI D +N + + +
Sbjct: 244 SLVSTGDCPFIV--CMS-------YAFHTPDKLS-FILDLMNGGDLHYHLSQHGVFSEAD 293
Query: 344 KRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHS 403
R+ E I GL ++H +R +++RDLK +NILLD + +ISD G+A F + H+
Sbjct: 294 MRFYAAE-IILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA 349
Query: 404 DTNRVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
VGT GYMAPE + G + +D FS G ++ +++ G
Sbjct: 350 S----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 42/213 (19%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVLLLARLQHRNLVRLLG 307
+G G +G+V + +GE +A+K+LS+ Q EI K E+LLL +QH N++ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLD 108
Query: 308 FCLERKERILVYEFVPNASL----DHFIFDPINREHM--------TWEKRYKIIEGIARG 355
F P +SL D ++ P + + + EK ++ + +G
Sbjct: 109 V------------FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKG 156
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRV--VGTFG 413
L Y+H ++HRDLK N+ ++ + KI DFG+AR H+D V T
Sbjct: 157 LKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVVTRW 206
Query: 414 YMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
Y APE ++ ++ DI+S G ++ E+++G+
Sbjct: 207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 25/213 (11%)
Query: 245 NFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNSKQGEIEFKN-EVLLLARLQHRNL 302
+++D +G G FG VY+ L + GE +A+K++ ++ + FKN E+ ++ +L H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNI 75
Query: 303 VRLLGFCL---ERKERI---LVYEFVPNASLDHFIFDPINREHMTWEKRYK--IIEGIAR 354
VRL F E+K+ + LV ++VP + + +R T Y + + R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFG 413
L Y+H I HRD+K N+LLD + K+ DFG A+ ++ + + + + +
Sbjct: 134 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY- 187
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQ 445
Y APE + ++ D++S G ++ E++ GQ
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 110/223 (49%), Gaps = 34/223 (15%)
Query: 239 IRVATDNFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNS---KQGEIEFKNEVLLL 294
I + ++FS +G+GGFG VY ++ G+ A+K L K KQGE NE ++L
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 295 ARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTW-----------E 343
+ + + ++ C+ Y F L FI D +N + + +
Sbjct: 243 SLVSTGDCPFIV--CMS-------YAFHTPDKLS-FILDLMNGGDLHYHLSQHGVFSEAD 292
Query: 344 KRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHS 403
R+ E I GL ++H +R +++RDLK +NILLD + +ISD G+A F + H+
Sbjct: 293 MRFYAAE-IILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA 348
Query: 404 DTNRVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
VGT GYMAPE + G + +D FS G ++ +++ G
Sbjct: 349 S----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 387
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 110/223 (49%), Gaps = 34/223 (15%)
Query: 239 IRVATDNFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNS---KQGEIEFKNEVLLL 294
I + ++FS +G+GGFG VY ++ G+ A+K L K KQGE NE ++L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 295 ARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTW-----------E 343
+ + + ++ C+ Y F L FI D +N + + +
Sbjct: 244 SLVSTGDCPFIV--CMS-------YAFHTPDKLS-FILDLMNGGDLHYHLSQHGVFSEAD 293
Query: 344 KRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHS 403
R+ E I GL ++H +R +++RDLK +NILLD + +ISD G+A F + H+
Sbjct: 294 MRFYAAE-IILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA 349
Query: 404 DTNRVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
VGT GYMAPE + G + +D FS G ++ +++ G
Sbjct: 350 S----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 73
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 129
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI D+G+AR T +
Sbjct: 130 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLAR-----HTDDEMT 180
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 109/232 (46%), Gaps = 33/232 (14%)
Query: 240 RVATDNFSDANKLGQGGFGAVYKGMLS----NGETIAVKRLSKNS--KQGEIEFKN-EVL 292
R+ +F+ LG+G FG V MLS E AVK L K+ + ++E E
Sbjct: 16 RMKLTDFNFLMVLGKGSFGKV---MLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKR 72
Query: 293 LLARLQHRNLVRLLGFCLERKERI-LVYEFVPNASLDHFIFDPINREHMTWEKRYK---- 347
+LA + L C + +R+ V E+V L + H+ R+K
Sbjct: 73 VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMY---------HIQQVGRFKEPHA 123
Query: 348 --IIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDT 405
IA GL +L II+RDLK N++LDSE + KI+DFGM + E T
Sbjct: 124 VFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTT 178
Query: 406 NRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETE 457
GT Y+APE + + + D ++FGVL+ E+++GQ + F E+E E
Sbjct: 179 KXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ--APFEGEDEDE 228
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 98/228 (42%), Gaps = 31/228 (13%)
Query: 244 DNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQGEIE-FKNEVLLLAR 296
+N LG G FG V + G +AVK L + E E +E+ +++
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 297 L-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFI--------------------FDPI 335
L QH N+V LLG C +++ E+ L +F+ D
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 336 NREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARL 395
+ + +A+G+ +L + IHRD+ A N+LL + KI DFG+AR
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 396 FEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
D + +MAPE + ++V+SD++S+G+L+ EI S
Sbjct: 208 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 107/219 (48%), Gaps = 23/219 (10%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 73
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYK 347
LL ++H N++ LL LE + + + A L++ + + +T +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KSQKLTDDHVQF 129
Query: 348 IIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR 407
+I I RGL Y+H IIHRDLK SN+ ++ + KI DFG+ R T +
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCR-----HTDDEMTG 181
Query: 408 VVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 18/201 (8%)
Query: 252 LGQGGFGAVYKGMLSNG----ETIAVKRLSKNSKQ--GEIEFKNEVLLLARLQHRNLVRL 305
LGQG FG V+ +G + A+K L K + + + K E +L + H +V+L
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 92
Query: 306 -LGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGLLYLHEDS 363
F E K L+ +F+ L F +++E M E+ K + +A L +LH
Sbjct: 93 HYAFQTEGK-LYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALALDHLHS-- 145
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHG 423
L II+RDLK NILLD E + K++DFG+++ E GT YMAPE V
Sbjct: 146 -LGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRR 202
Query: 424 RFSVKSDIFSFGVLVLEIVSG 444
+ +D +SFGVL+ E+++G
Sbjct: 203 GHTQSADWWSFGVLMFEMLTG 223
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 245 NFSDANKLGQGGFGAVYKG-MLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHR 300
N+ +G+G F V + G+ +AVK + K NS + F+ EV ++ L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHP 73
Query: 301 NLVRLLGFCLERKERILVYEFVPNASL-DHFIFDPINREHMTWEKRYKIIEGIARGLLYL 359
N+V+L K LV E+ + D+ + +E K +I+ + Y
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ----YC 129
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H+ I+HRDLKA N+LLD++MN KI+DFG + F + + G Y APE
Sbjct: 130 HQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG---NKLDAFCGAPPYAAPEL 183
Query: 420 VMHGRFS-VKSDIFSFGVLVLEIVSG 444
++ + D++S GV++ +VSG
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 18/201 (8%)
Query: 252 LGQGGFGAVYKGMLSNG----ETIAVKRLSKNSKQ--GEIEFKNEVLLLARLQHRNLVRL 305
LGQG FG V+ +G + A+K L K + + + K E +L + H +V+L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 306 -LGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI-IEGIARGLLYLHEDS 363
F E K L+ +F+ L F +++E M E+ K + +A L +LH
Sbjct: 92 HYAFQTEGK-LYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALALDHLHS-- 144
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHG 423
L II+RDLK NILLD E + K++DFG+++ E GT YMAPE V
Sbjct: 145 -LGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 424 RFSVKSDIFSFGVLVLEIVSG 444
+ +D +SFGVL+ E+++G
Sbjct: 202 GHTQSADWWSFGVLMFEMLTG 222
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 25/213 (11%)
Query: 245 NFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNSKQGEIEFKN-EVLLLARLQHRNL 302
+++D +G G FG VY+ L + GE +A+K++ ++ + FKN E+ ++ +L H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNI 75
Query: 303 VRLLGFCL---ERKERI---LVYEFVPNASLDHFIFDPINREHMTWEKRYK--IIEGIAR 354
VRL F E+K+ + LV ++VP + + +R T Y + + R
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFG 413
L Y+H I HRD+K N+LLD + K+ DFG A+ ++ + + + + +
Sbjct: 134 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY- 187
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQ 445
Y APE + ++ D++S G ++ E++ GQ
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 119/239 (49%), Gaps = 22/239 (9%)
Query: 241 VATDNFSDANKLGQGGFGAVYK-GMLSNGETIAVKRLSK----NSKQG--EIEFKNEVLL 293
+ D++ +LG G F V K G+ A K + K +S++G E + EV +
Sbjct: 23 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNI 82
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
L ++H N++ L + + +L+ E V L F+ + +E +T ++ + ++ I
Sbjct: 83 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE---KESLTEDEATQFLKQIL 139
Query: 354 RGLLYLHEDSRLRIIHRDLKASNI-LLDSEM-NPKIS--DFGMARLFEMDQTHSDTNRVV 409
G+ YLH RI H DLK NI LLD + NP+I DFG+A E ++ +
Sbjct: 140 DGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE---AGNEFKNIF 193
Query: 410 GTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWN 468
GT ++APE V + +++D++S GV+ ++SG S F E + E L + N++
Sbjct: 194 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA--SPFLGETKQETLTNISAVNYD 250
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 9/205 (4%)
Query: 242 ATDNFSDANKLGQGGFG-AVYKGMLSNGETIAVKRL--SKNSKQGEIEFKNEVLLLARLQ 298
+ + + K+G+G FG A+ +G +K + S+ S + E + EV +LA ++
Sbjct: 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK 81
Query: 299 HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
H N+V+ E +V ++ L F IN + + +I++ + L
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEGGDL----FKRINAQKGVLFQEDQILDWFVQICLA 137
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPE 418
L +I+HRD+K+ NI L + ++ DFG+AR+ ++ T +GT Y++PE
Sbjct: 138 LKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELARACIGTPYYLSPE 195
Query: 419 YVMHGRFSVKSDIFSFGVLVLEIVS 443
+ ++ KSDI++ G ++ E+ +
Sbjct: 196 ICENKPYNNKSDIWALGCVLYELCT 220
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 245 NFSDANKLGQGGFGAVYKG-MLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHR 300
N+ +G+G F V + G+ +AV+ + K NS + F+ EV ++ L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHP 73
Query: 301 NLVRLLGFCLERKERILVYEFVPNASL-DHFIFDPINREHMTWEKRYKIIEGIARGLLYL 359
N+V+L K LV E+ + D+ + +E K +I+ + Y
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ----YC 129
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H+ I+HRDLKA N+LLD++MN KI+DFG + F + + G+ Y APE
Sbjct: 130 HQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG---NKLDEFCGSPPYAAPEL 183
Query: 420 VMHGRFS-VKSDIFSFGVLVLEIVSG 444
++ + D++S GV++ +VSG
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVK---RLSKNSKQGEI--EFKNEVLLLARLQHRNLVRLL 306
+G+G FG V++G+ + E A+ + KN + +F E L + + H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
G E I++ E L F+ + + + ++ L YL R
Sbjct: 458 GVITENPVWIIM-ELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFS 426
+HRD+ A N+L+ + K+ DFG++R E D T+ ++ +MAPE + RF+
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 427 VKSDIFSFGVLVLEIV 442
SD++ FGV + EI+
Sbjct: 571 SASDVWMFGVCMWEIL 586
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 17/207 (8%)
Query: 244 DNFSDANKLGQGGFGAVYK-GMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHR-- 300
D+F ++LG G G V+K +G +A K + K +N+++ ++ H
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQVLHECN 124
Query: 301 --NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+V G E + E + SLD + + + K+ + +GL Y
Sbjct: 125 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTY 181
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPE 418
L E + +I+HRD+K SNIL++S K+ DFG++ S N VGT YM+PE
Sbjct: 182 LRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMSPE 235
Query: 419 YVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
+ +SV+SDI+S G+ ++E+ G+
Sbjct: 236 RLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 245 NFSDANKLGQGGFGAVYKG-MLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHR 300
N+ +G+G F V + G +A+K + K N + F+ EV ++ L H
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHP 71
Query: 301 NLVRLLGFCLERKERILVYEFVPNASL-DHFIFDPINREHMTWEKRYKIIEGIARGLLYL 359
N+V+L K L+ E+ + D+ + +E K +I+ + Y
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ----YC 127
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H+ RI+HRDLKA N+LLD++MN KI+DFG + F + + G+ Y APE
Sbjct: 128 HQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG---GKLDTFCGSPPYAAPEL 181
Query: 420 VMHGRFS-VKSDIFSFGVLVLEIVSG 444
++ + D++S GV++ +VSG
Sbjct: 182 FQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 240 RVATDNFSDANKLGQGGFGAVYK-GMLSNGETIAVKRLSKN--SKQGEIEFKN-EVLLLA 295
+ + +F LG G FG V+ NG A+K L K + ++E N E L+L+
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 296 RLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEG-IAR 354
+ H ++R+ G + ++ ++ +++ L F + + K +
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL----FSLLRKSQRFPNPVAKFYAAEVCL 117
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGY 414
L YLH II+RDLK NILLD + KI+DFG A+ + D T+ + GT Y
Sbjct: 118 ALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAK-YVPDVTYX----LCGTPDY 169
Query: 415 MAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+APE V ++ D +SFG+L+ E+++G
Sbjct: 170 IAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 245 NFSDANKLGQGGFGAVYKG-MLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHR 300
N+ +G+G F V + G+ +AV+ + K NS + F+ EV ++ L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHP 73
Query: 301 NLVRLLGFCLERKERILVYEFVPNASL-DHFIFDPINREHMTWEKRYKIIEGIARGLLYL 359
N+V+L K LV E+ + D+ + +E K +I+ + Y
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ----YC 129
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H+ I+HRDLKA N+LLD++MN KI+DFG + F + + G+ Y APE
Sbjct: 130 HQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG---NKLDTFCGSPPYAAPEL 183
Query: 420 VMHGRFS-VKSDIFSFGVLVLEIVSG 444
++ + D++S GV++ +VSG
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 245 NFSDANKLGQGGFGAVYKG-MLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHR 300
N+ +G+G F V + G +A+K + K N + F+ EV ++ L H
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHP 74
Query: 301 NLVRLLGFCLERKERILVYEFVPNASL-DHFIFDPINREHMTWEKRYKIIEGIARGLLYL 359
N+V+L K L+ E+ + D+ + +E K +I+ + Y
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ----YC 130
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H+ RI+HRDLKA N+LLD++MN KI+DFG + F + + G Y APE
Sbjct: 131 HQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG---GKLDAFCGAPPYAAPEL 184
Query: 420 VMHGRFS-VKSDIFSFGVLVLEIVSG 444
++ + D++S GV++ +VSG
Sbjct: 185 FQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 20/216 (9%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYK-GMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLA 295
+ V D+ +LG+G +G V K + +G+ +AVKR+ E + +L+
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE---QKRLLMDL 100
Query: 296 RLQHRNL-----VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRY-KII 349
+ R + V G + + E + + SLD F I++ E KI
Sbjct: 101 DISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIA 159
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVV 409
I + L +LH S+L +IHRD+K SN+L+++ K+ DFG++ + +D +
Sbjct: 160 VSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISG-YLVDSVAKTID--A 214
Query: 410 GTFGYMAPEYV----MHGRFSVKSDIFSFGVLVLEI 441
G YMAPE + +SVKSDI+S G+ ++E+
Sbjct: 215 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 115/237 (48%), Gaps = 21/237 (8%)
Query: 218 KLEDENVEETIAKSLQ-FDFETIRVAT---DNFSDANKLGQGGFGAVYK-GMLSNGETIA 272
KLE+ ++E K L+ F + +V D+F ++LG G G V+K +G +A
Sbjct: 3 KLEELELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA 62
Query: 273 VKRLSKNSKQGEIEFKNEVLLLARLQHR----NLVRLLGFCLERKERILVYEFVPNASLD 328
K + K +N+++ ++ H +V G E + E + SLD
Sbjct: 63 RKLIHLEIKPA---IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD 119
Query: 329 HFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKIS 388
+ R + + K+ + +GL YL E + +I+HRD+K SNIL++S K+
Sbjct: 120 Q-VLKKAGR--IPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLC 174
Query: 389 DFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
DFG++ S N VGT YM+PE + +SV+SDI+S G+ ++E+ G+
Sbjct: 175 DFGVSGQL----IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS--KNSKQGEIEFKNEVLLLARLQH 299
TD + +G+G F V + + L G A K ++ K S + + + E + L+H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 300 RNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYL 359
N+VRL E LV++ V L D + RE+ + I+ I +L+
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLHC 119
Query: 360 HEDSRLRIIHRDLKASNILLDSEMN---PKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
H+ + ++HRDLK N+LL S+ K++DFG+A + DQ GT GY++
Sbjct: 120 HQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ--QAWFGFAGTPGYLS 174
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
PE + + DI++ GV++ ++ G
Sbjct: 175 PEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 110/213 (51%), Gaps = 25/213 (11%)
Query: 245 NFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNSKQGEIEFKN-EVLLLARLQHRNL 302
+++D +G G FG VY+ L + GE +A+K++ QG+ FKN E+ ++ +L H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGK-AFKNRELQIMRKLDHCNI 75
Query: 303 VRLLGFCL---ERKERI---LVYEFVPNASLDHFIFDPINREHMTWEKRYK--IIEGIAR 354
VRL F E+K+ + LV ++VP + + +R T Y + + R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFG 413
L Y+H I HRD+K N+LLD + K+ DFG A+ ++ + + + + +
Sbjct: 134 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY- 187
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQ 445
Y APE + ++ D++S G ++ E++ GQ
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELR 73
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 129
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI DF +AR T +
Sbjct: 130 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLAR-----HTDDEMT 180
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 110/213 (51%), Gaps = 25/213 (11%)
Query: 245 NFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNSKQGEIEFKN-EVLLLARLQHRNL 302
+++D +G G FG VY+ L + GE +A+K++ QG+ FKN E+ ++ +L H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGK-AFKNRELQIMRKLDHCNI 75
Query: 303 VRLLGFCL---ERKERI---LVYEFVPNASLDHFIFDPINREHMTWEKRYK--IIEGIAR 354
VRL F E+K+ + LV ++VP + + +R T Y + + R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFG 413
L Y+H I HRD+K N+LLD + K+ DFG A+ ++ + + + + +
Sbjct: 134 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY- 187
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQ 445
Y APE + ++ D++S G ++ E++ GQ
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 110/213 (51%), Gaps = 25/213 (11%)
Query: 245 NFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNSKQGEIEFKN-EVLLLARLQHRNL 302
+++D +G G FG VY+ L + GE +A+K++ QG+ FKN E+ ++ +L H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGK-AFKNRELQIMRKLDHCNI 75
Query: 303 VRLLGFCL---ERKERI---LVYEFVPNASLDHFIFDPINREHMTWEKRYK--IIEGIAR 354
VRL F E+K+ + LV ++VP + + +R T Y + + R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFG 413
L Y+H I HRD+K N+LLD + K+ DFG A+ ++ + + + + +
Sbjct: 134 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY- 187
Query: 414 YMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSGQ 445
Y APE + ++ D++S G ++ E++ GQ
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIE--FKNEVLLLARLQHR 300
+ + K+G+G +G V+K G+ +A+K+ ++ I+ E+ +L +L+H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINR------EHMTWEKRYKIIEGIAR 354
NLV LL ++ LV+E+ DH + ++R EH+ ++ ++ +
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYC-----DHTVLHELDRYQRGVPEHLVKSITWQTLQAVN- 116
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGY 414
+ H+ + IHRD+K NIL+ K+ DFG ARL + D V T Y
Sbjct: 117 ---FCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE--VATRWY 168
Query: 415 MAPEYVM-HGRFSVKSDIFSFGVLVLEIVSG 444
+PE ++ ++ D+++ G + E++SG
Sbjct: 169 RSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 11/209 (5%)
Query: 239 IRVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEI--EFKNEVLLLAR 296
+ + D+F ++LG G G V+K + ++L + I + E+ +L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 297 LQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGL 356
+V G E + E + SLD + R + + K+ + +GL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ-VLKKAGR--IPEQILGKVSIAVIKGL 117
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
YL E + +I+HRD+K SNIL++S K+ DFG++ S N VGT YM+
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMS 171
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
PE + +SV+SDI+S G+ ++E+ G+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 104/231 (45%), Gaps = 32/231 (13%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCLE 311
+G+G FG V++G GE +AVK S ++ + E+ L+H N+ LGF
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENI---LGFIAA 104
Query: 312 -------RKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED-- 362
+ LV ++ + SL FD +NR +T E K+ A GL +LH +
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 160
Query: 363 ---SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFE--MDQTHSDTNRVVGTFGYMAP 417
+ I HRDLK+ NIL+ I+D G+A + D N VGT YMAP
Sbjct: 161 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 220
Query: 418 EYV------MHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTY 462
E + H ++DI++ G++ EI +R S G E L Y
Sbjct: 221 EVLDDSINMKHFESFKRADIYAMGLVFWEIA---RRCSIGGIHEDYQLPYY 268
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 104/231 (45%), Gaps = 32/231 (13%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCLE 311
+G+G FG V++G GE +AVK S ++ + E+ L+H N+ LGF
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENI---LGFIAA 66
Query: 312 -------RKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED-- 362
+ LV ++ + SL FD +NR +T E K+ A GL +LH +
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 122
Query: 363 ---SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFE--MDQTHSDTNRVVGTFGYMAP 417
+ I HRDLK+ NIL+ I+D G+A + D N VGT YMAP
Sbjct: 123 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 182
Query: 418 EYV------MHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTY 462
E + H ++DI++ G++ EI +R S G E L Y
Sbjct: 183 EVLDDSINMKHFESFKRADIYAMGLVFWEIA---RRCSIGGIHEDYQLPYY 230
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 11/209 (5%)
Query: 239 IRVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEI--EFKNEVLLLAR 296
+ + D+F ++LG G G V+K + ++L + I + E+ +L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 297 LQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGL 356
+V G E + E + SLD + R + + K+ + +GL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ-VLKKAGR--IPEQILGKVSIAVIKGL 117
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
YL E + +I+HRD+K SNIL++S K+ DFG++ S N VGT YM+
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMS 171
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
PE + +SV+SDI+S G+ ++E+ G+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 11/209 (5%)
Query: 239 IRVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEI--EFKNEVLLLAR 296
+ + D+F ++LG G G V+K + ++L + I + E+ +L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 297 LQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGL 356
+V G E + E + SLD + R + + K+ + +GL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ-VLKKAGR--IPEQILGKVSIAVIKGL 117
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
YL E + +I+HRD+K SNIL++S K+ DFG++ S N VGT YM+
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMS 171
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
PE + +SV+SDI+S G+ ++E+ G+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 119/247 (48%), Gaps = 43/247 (17%)
Query: 215 GKLKLEDENVEETIAKSLQFDFETIRVATDNFSDANKLGQGGFGAVYKGMLS-NGETIAV 273
GKLK+ E +DF ++ D ++G+G +G+V K + +G+ +AV
Sbjct: 7 GKLKISPEQ---------HWDF-----TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAV 52
Query: 274 KRLSKNSKQGEIEFKNEVLLLARLQHRN-----LVRLLGFCLERKERILVYEFVPNASLD 328
KR+ + E + ++L+ + R+ +V+ G + + E + + S D
Sbjct: 53 KRIRSTVDEKE---QKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELM-STSFD 108
Query: 329 HF------IFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSE 382
F + D + E + KI + L +L E+ L+IIHRD+K SNILLD
Sbjct: 109 KFYKYVYSVLDDVIPEEILG----KITLATVKALNHLKEN--LKIIHRDIKPSNILLDRS 162
Query: 383 MNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYV----MHGRFSVKSDIFSFGVLV 438
N K+ DFG++ ++ + + T R G YMAPE + + V+SD++S G+ +
Sbjct: 163 GNIKLCDFGISG--QLVDSIAKT-RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITL 219
Query: 439 LEIVSGQ 445
E+ +G+
Sbjct: 220 YELATGR 226
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 104/231 (45%), Gaps = 32/231 (13%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCLE 311
+G+G FG V++G GE +AVK S ++ + E+ L+H N+ LGF
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENI---LGFIAA 91
Query: 312 -------RKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED-- 362
+ LV ++ + SL FD +NR +T E K+ A GL +LH +
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 147
Query: 363 ---SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFE--MDQTHSDTNRVVGTFGYMAP 417
+ I HRDLK+ NIL+ I+D G+A + D N VGT YMAP
Sbjct: 148 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 207
Query: 418 EYV------MHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTY 462
E + H ++DI++ G++ EI +R S G E L Y
Sbjct: 208 EVLDDSINMKHFESFKRADIYAMGLVFWEIA---RRCSIGGIHEDYQLPYY 255
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 23/219 (10%)
Query: 238 TIRVATD------NFSDANKLGQGGFGAVYKG-MLSNGETIAVKRLSK---NSKQGEIEF 287
+I ATD N+ +G+G F V + G +AVK + K N + F
Sbjct: 3 SITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLF 62
Query: 288 KNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASL-DHFIFDPINREHMTWEKRY 346
+ EV ++ L H N+V+L K LV E+ + D+ + +E K
Sbjct: 63 R-EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR 121
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I+ + Y H+ I+HRDLKA N+LLD +MN KI+DFG + F + + +
Sbjct: 122 QIVSAVQ----YCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVG---NKLD 171
Query: 407 RVVGTFGYMAPEYVMHGRFS-VKSDIFSFGVLVLEIVSG 444
G+ Y APE ++ + D++S GV++ +VSG
Sbjct: 172 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 104/231 (45%), Gaps = 32/231 (13%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCLE 311
+G+G FG V++G GE +AVK S ++ + E+ L+H N+ LGF
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENI---LGFIAA 71
Query: 312 -------RKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED-- 362
+ LV ++ + SL FD +NR +T E K+ A GL +LH +
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 127
Query: 363 ---SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFE--MDQTHSDTNRVVGTFGYMAP 417
+ I HRDLK+ NIL+ I+D G+A + D N VGT YMAP
Sbjct: 128 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 187
Query: 418 EYV------MHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTY 462
E + H ++DI++ G++ EI +R S G E L Y
Sbjct: 188 EVLDDSINMKHFESFKRADIYAMGLVFWEIA---RRCSIGGIHEDYQLPYY 235
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 104/231 (45%), Gaps = 32/231 (13%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCLE 311
+G+G FG V++G GE +AVK S ++ + E+ L+H N+ LGF
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENI---LGFIAA 65
Query: 312 -------RKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED-- 362
+ LV ++ + SL FD +NR +T E K+ A GL +LH +
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 121
Query: 363 ---SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFE--MDQTHSDTNRVVGTFGYMAP 417
+ I HRDLK+ NIL+ I+D G+A + D N VGT YMAP
Sbjct: 122 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 181
Query: 418 EYV------MHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTY 462
E + H ++DI++ G++ EI +R S G E L Y
Sbjct: 182 EVLDDSINMKHFESFKRADIYAMGLVFWEIA---RRCSIGGIHEDYQLPYY 229
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 104/231 (45%), Gaps = 32/231 (13%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCLE 311
+G+G FG V++G GE +AVK S ++ + E+ L+H N+ LGF
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENI---LGFIAA 68
Query: 312 -------RKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED-- 362
+ LV ++ + SL FD +NR +T E K+ A GL +LH +
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 124
Query: 363 ---SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFE--MDQTHSDTNRVVGTFGYMAP 417
+ I HRDLK+ NIL+ I+D G+A + D N VGT YMAP
Sbjct: 125 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 184
Query: 418 EYV------MHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTY 462
E + H ++DI++ G++ EI +R S G E L Y
Sbjct: 185 EVLDDSINMKHFESFKRADIYAMGLVFWEIA---RRCSIGGIHEDYQLPYY 232
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 73
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 129
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI FG+AR T +
Sbjct: 130 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLAR-----HTDDEMT 180
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 27/224 (12%)
Query: 236 FETIRVATDNFSDANK------LGQGGFGAVYKGMLSN-GETIAVKRLSK---NSKQGEI 285
F ++ VA F+ + +G G G V + G +AVK+LS+ N +
Sbjct: 10 FYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKR 69
Query: 286 EFKNEVLLLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFIFDPINREHM 340
++ E++LL + H+N++ LL LE + + + + +A+L I ++ E M
Sbjct: 70 AYR-ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERM 128
Query: 341 TWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQ 400
++ ++ + G+ +LH IIHRDLK SNI++ S+ KI DFG+AR
Sbjct: 129 SY-----LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAC 177
Query: 401 THSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
T+ V T Y APE ++ ++ DI+S G ++ E+V G
Sbjct: 178 TNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 73
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 129
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI D G+AR T +
Sbjct: 130 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLAR-----HTDDEMT 180
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 20/213 (9%)
Query: 240 RVATDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQ-----GEIEFKNEVLL 293
RV ++ + LG G FG V G G +AVK L++ + G+I K E+
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKI--KREIQN 64
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
L +H ++++L + +V E+V L +I E M E R ++ + I
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM--EAR-RLFQQIL 121
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+ Y H R ++HRDLK N+LLD+ MN KI+DFG++ + D T+ G+
Sbjct: 122 SAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRTS--CGSPN 175
Query: 414 YMAPEYVMHGRFSV--KSDIFSFGVLVLEIVSG 444
Y APE V+ GR + DI+S GV++ ++ G
Sbjct: 176 YAAPE-VISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 239 IRVATDNFSDANKLGQGGFGAVYK-GMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARL 297
+ + D+F ++LG G G V+K +G +A K + K +N+++ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQV 57
Query: 298 QHR----NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
H +V G E + E + SLD + R + + K+ +
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ-VLKKAGR--IPEQILGKVSIAVI 114
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+GL YL E + +I+HRD+K SNIL++S K+ DFG++ S N VGT
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRS 168
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
YM+PE + +SV+SDI+S G+ ++E+ G+
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 239 IRVATDNFSDANKLGQGGFGAVYK-GMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARL 297
+ + D+F ++LG G G V+K +G +A K + K +N+++ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQV 57
Query: 298 QHR----NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
H +V G E + E + SLD + R + + K+ +
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ-VLKKAGR--IPEQILGKVSIAVI 114
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFG 413
+GL YL E + +I+HRD+K SNIL++S K+ DFG++ S N VGT
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRS 168
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
YM+PE + +SV+SDI+S G+ ++E+ G+
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 252 LGQGGFGAVYKGMLSNGET-------IAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
LG+GGF ++ +S+ +T I K L Q E + E+ + L H+++V
Sbjct: 29 LGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQRE-KMSMEISIHRSLAHQHVVG 85
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
GF + +V E SL R+ +T + + I G YLH R
Sbjct: 86 FHGFFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLH---R 139
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
R+IHRDLK N+ L+ ++ KI DFG+A E D T + GT Y+APE +
Sbjct: 140 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKG 197
Query: 425 FSVKSDIFSFGVLVLEIVSGQ 445
S + D++S G ++ ++ G+
Sbjct: 198 HSFEVDVWSIGCIMYTLLVGK 218
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 252 LGQGGFGAVYKGMLSNGET-------IAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
LG+GGF ++ +S+ +T I K L Q E + E+ + L H+++V
Sbjct: 25 LGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQRE-KMSMEISIHRSLAHQHVVG 81
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
GF + +V E SL R+ +T + + I G YLH R
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLH---R 135
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
R+IHRDLK N+ L+ ++ KI DFG+A E D T + GT Y+APE +
Sbjct: 136 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKG 193
Query: 425 FSVKSDIFSFGVLVLEIVSGQ 445
S + D++S G ++ ++ G+
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGK 214
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 252 LGQGGFGAVYKGMLSNGET-------IAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
LG+GGF ++ +S+ +T I K L Q E + E+ + L H+++V
Sbjct: 25 LGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQRE-KMSMEISIHRSLAHQHVVG 81
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
GF + +V E SL R+ +T + + I G YLH R
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLH---R 135
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
R+IHRDLK N+ L+ ++ KI DFG+A E D T + GT Y+APE +
Sbjct: 136 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKG 193
Query: 425 FSVKSDIFSFGVLVLEIVSGQ 445
S + D++S G ++ ++ G+
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGK 214
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 20/216 (9%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKG-MLSNGETIAVKRLSKNSKQGEIEFKNEVLLLA 295
E V D+ +LG+G +G V K + +G+ AVKR+ E + +L
Sbjct: 27 ENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQE---QKRLLXDL 83
Query: 296 RLQHRNL-----VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRY-KII 349
+ R + V G L R+ + + + + SLD F I++ E KI
Sbjct: 84 DISXRTVDCPFTVTFYG-ALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIA 142
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVV 409
I + L +LH S+L +IHRD+K SN+L+++ K DFG++ + +D D +
Sbjct: 143 VSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISG-YLVDDVAKDID--A 197
Query: 410 GTFGYMAPEYV----MHGRFSVKSDIFSFGVLVLEI 441
G Y APE + +SVKSDI+S G+ +E+
Sbjct: 198 GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 30/225 (13%)
Query: 244 DNFSDANKLGQGGFGAVYK----GMLSN--GETIAVKRLSKNSKQGEIE-FKNEVLLLAR 296
+ S LG G FG V + G++ + T+AVK L ++ E E +E+ +L+
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 297 L-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKII------ 349
L H N+V LLG C +++ E+ L +F+ R+ K I
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR--KRDSFICSKTSPAIMEDDEL 163
Query: 350 -----------EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEM 398
+A+G+ +L + IHRDL A NILL KI DFG+AR +
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARHIKN 220
Query: 399 DQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
D + +MAPE + + ++ +SD++S+G+ + E+ S
Sbjct: 221 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 14/199 (7%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN---SKQGEIEFKNEVLLLARLQHRNLVRLLG 307
LG+GGF Y+ + E A K + K+ + + E+ + L + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 308 FCLERKERILVYEFVPNASLDHFIFDPINREHMTW-EKRYKIIEGIARGLLYLHEDSRLR 366
F + +V E SL R+ +T E RY + + I +G+ YLH + R
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTI-QGVQYLHNN---R 162
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFS 426
+IHRDLK N+ L+ +M+ KI DFG+A E D T + GT Y+APE + S
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCGTPNYIAPEVLCKKGHS 220
Query: 427 VKSDIFSFGVLVLEIVSGQ 445
+ DI+S G ++ ++ G+
Sbjct: 221 FEVDIWSLGCILYTLLVGK 239
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGMLSNGET-IAVKRLSKNSKQG-EIEFKNEVLLL 294
E IR D F D LG G F V + +A+K ++K + +G E +NE+ +L
Sbjct: 14 EDIRDIYD-FRDV--LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 295 ARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRY-KIIEGIA 353
+++H N+V L L+ + V L FD I + E+ ++I +
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVL 126
Query: 354 RGLLYLHEDSRLRIIHRDLKASNIL---LDSEMNPKISDFGMARLFEMDQTHSDTNRVVG 410
+ YLH+ L I+HRDLK N+L LD + ISDFG+++ M+ S + G
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACG 180
Query: 411 TFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
T GY+APE + +S D +S GV+ ++ G
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGMLSNGET-IAVKRLSKNSKQG-EIEFKNEVLLL 294
E IR D F D LG G F V + +A+K ++K + +G E +NE+ +L
Sbjct: 14 EDIRDIYD-FRDV--LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVL 70
Query: 295 ARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRY-KIIEGIA 353
+++H N+V L L+ + V L FD I + E+ ++I +
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVL 126
Query: 354 RGLLYLHEDSRLRIIHRDLKASNIL---LDSEMNPKISDFGMARLFEMDQTHSDTNRVVG 410
+ YLH+ L I+HRDLK N+L LD + ISDFG+++ M+ S + G
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACG 180
Query: 411 TFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
T GY+APE + +S D +S GV+ ++ G
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 30/225 (13%)
Query: 244 DNFSDANKLGQGGFGAVYK----GMLSN--GETIAVKRLSKNSKQGEIE-FKNEVLLLAR 296
+ S LG G FG V + G++ + T+AVK L ++ E E +E+ +L+
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 297 L-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKII------ 349
L H N+V LLG C +++ E+ L +F+ R+ K I
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR--KRDSFICSKTSPAIMEDDEL 140
Query: 350 -----------EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEM 398
+A+G+ +L + IHRDL A NILL KI DFG+AR +
Sbjct: 141 ALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKN 197
Query: 399 DQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
D + +MAPE + + ++ +SD++S+G+ + E+ S
Sbjct: 198 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 73
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 129
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI D G+AR T +
Sbjct: 130 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLAR-----HTDDEMT 180
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 30/225 (13%)
Query: 244 DNFSDANKLGQGGFGAVYK----GMLSN--GETIAVKRLSKNSKQGEIE-FKNEVLLLAR 296
+ S LG G FG V + G++ + T+AVK L ++ E E +E+ +L+
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 297 L-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKII------ 349
L H N+V LLG C +++ E+ L +F+ R+ K I
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR--KRDSFICSKTSPAIMEDDEL 156
Query: 350 -----------EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEM 398
+A+G+ +L + IHRDL A NILL KI DFG+AR +
Sbjct: 157 ALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKN 213
Query: 399 DQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
D + +MAPE + + ++ +SD++S+G+ + E+ S
Sbjct: 214 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 30/225 (13%)
Query: 244 DNFSDANKLGQGGFGAVYK----GMLSN--GETIAVKRLSKNSKQGEIE-FKNEVLLLAR 296
+ S LG G FG V + G++ + T+AVK L ++ E E +E+ +L+
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 297 L-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKII------ 349
L H N+V LLG C +++ E+ L +F+ R+ K I
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR--KRDSFICSKTSPAIMEDDEL 163
Query: 350 -----------EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEM 398
+A+G+ +L + IHRDL A NILL KI DFG+AR +
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKN 220
Query: 399 DQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
D + +MAPE + + ++ +SD++S+G+ + E+ S
Sbjct: 221 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGMLSNGET-IAVKRLSKNSKQG-EIEFKNEVLLL 294
E IR D F D LG G F V + +A+K ++K + +G E +NE+ +L
Sbjct: 14 EDIRDIYD-FRDV--LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 295 ARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRY-KIIEGIA 353
+++H N+V L L+ + V L FD I + E+ ++I +
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVL 126
Query: 354 RGLLYLHEDSRLRIIHRDLKASNIL---LDSEMNPKISDFGMARLFEMDQTHSDTNRVVG 410
+ YLH+ L I+HRDLK N+L LD + ISDFG+++ M+ S + G
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACG 180
Query: 411 TFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
T GY+APE + +S D +S GV+ ++ G
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 22/200 (11%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGF- 308
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 36 AQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVF 92
Query: 309 ----CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
LE + + + + +A+L I ++ E M++ Y+++ GI +LH
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-LLYQMLVGIK----HLHSAG- 146
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
IIHRDLK SNI++ S+ KI DFG+AR + T VV + Y APE ++
Sbjct: 147 --IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMG 201
Query: 425 FSVKSDIFSFGVLVLEIVSG 444
+ DI+S GV++ E++ G
Sbjct: 202 YKENVDIWSVGVIMGEMIKG 221
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 25/220 (11%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN---EVL 292
+TI + + + + +G G +G+V G +AVK+LS+ Q I K E+
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELR 73
Query: 293 LLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRY 346
LL ++H N++ LL LE + + + A L++ + + +H+ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---- 129
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+I I RGL Y+H IIHRDLK SN+ ++ + KI D G+AR T +
Sbjct: 130 -LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLAR-----HTDDEMT 180
Query: 407 RVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
V T Y APE +++ ++ DI+S G ++ E+++G+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 244 DNFSDANKLGQGGFGAVYK-GMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHR-- 300
D+F ++LG G G V+K +G +A K + K +N+++ ++ H
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQVLHECN 65
Query: 301 --NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+V G E + E + SLD + R + + K+ + +GL Y
Sbjct: 66 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQ-VLKKAGR--IPEQILGKVSIAVIKGLTY 122
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPE 418
L E + +I+HRD+K SNIL++S K+ DFG++ +D+ N VGT YM+PE
Sbjct: 123 LRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDEM---ANEFVGTRSYMSPE 176
Query: 419 YVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
+ +SV+SDI+S G+ ++E+ G+
Sbjct: 177 RLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 23/207 (11%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVKRLSKNSKQG---EIEFKNEVLLLARLQHRNLVRLLGF 308
+G+G +G V++G L +GE++AVK S +Q E E N VLL +H N++ +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLL----RHDNILGFIAS 70
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED-----S 363
+ + + + ++D + R+ + ++ A GL +LH +
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQG 130
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSD--TNRVVGTFGYMAPEYVM 421
+ I HRD K+ N+L+ S + I+D G+A + + D N VGT YMAPE V+
Sbjct: 131 KPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPE-VL 189
Query: 422 HGRFSVK-------SDIFSFGVLVLEI 441
+ +DI++FG+++ EI
Sbjct: 190 DEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 22/200 (11%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGF- 308
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVF 92
Query: 309 ----CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
LE + + + + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-----LLYQMLVGIKHLHSAG- 146
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
IIHRDLK SNI++ S+ KI DFG+AR + T VV + Y APE ++
Sbjct: 147 --IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMG 201
Query: 425 FSVKSDIFSFGVLVLEIVSG 444
+ DI+S GV++ E++ G
Sbjct: 202 YKENVDIWSVGVIMGEMIKG 221
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 30/225 (13%)
Query: 244 DNFSDANKLGQGGFGAVYK----GMLSN--GETIAVKRLSKNSKQGEIE-FKNEVLLLAR 296
+ S LG G FG V + G++ + T+AVK L ++ E E +E+ +L+
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 297 L-QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKII------ 349
L H N+V LLG C +++ E+ L +F+ R+ K I
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR--KRDSFICSKTSPAIMEDDEL 158
Query: 350 -----------EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEM 398
+A+G+ +L + IHRDL A NILL KI DFG+AR +
Sbjct: 159 ALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKN 215
Query: 399 DQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
D + +MAPE + + ++ +SD++S+G+ + E+ S
Sbjct: 216 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 110/230 (47%), Gaps = 13/230 (5%)
Query: 244 DNFSDANKLGQGGFGAVY-KGMLSNGETIAVKRLSKNSKQGEIE-FKNEVLLLARLQHRN 301
D F KLG G FG V+ S+G +K ++K+ Q +E + E+ +L L H N
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 302 LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRY-KIIEGIARGLLYLH 360
++++ + +V E L I R E ++++ + L Y H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 361 EDSRLRIIHRDLKASNILLD--SEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFGYMAP 417
++H+DLK NIL S +P KI DFG+A LF+ D+ HS TN GT YMAP
Sbjct: 142 SQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE-HS-TN-AAGTALYMAP 195
Query: 418 EYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNW 467
E V + K DI+S GV++ +++G + + EE + TY N+
Sbjct: 196 E-VFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNY 244
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 112/226 (49%), Gaps = 31/226 (13%)
Query: 236 FETIRVATDNFSDANK------LGQGGFG---AVYKGMLSNGETIAVKRLSK---NSKQG 283
F +++VA F+ + +G G G A + +L G +AVK+LS+ N
Sbjct: 8 FYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHA 65
Query: 284 EIEFKNEVLLLARLQHRNLVRLLGF-----CLERKERILVYEFVPNASLDHFIFDPINRE 338
+ ++ E++LL + H+N++ LL LE + + + + +A+L I ++ E
Sbjct: 66 KRAYR-ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHE 124
Query: 339 HMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEM 398
M++ ++ + G+ +LH IIHRDLK SNI++ S+ KI DFG+AR
Sbjct: 125 RMSY-----LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---T 173
Query: 399 DQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
T+ V T Y APE ++ + DI+S G ++ E+V G
Sbjct: 174 ASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 24/244 (9%)
Query: 228 IAKSLQFDFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEI-- 285
I+ L+ E + + F+ LG+G FG+V + L + VK K K I
Sbjct: 7 ISDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIAS 66
Query: 286 ----EFKNEVLLLARLQHRNLVRLLGFCLERKER------ILVYEFVPNASLDHFIF--- 332
EF E + H ++ +L+G L + + +++ F+ + L F+
Sbjct: 67 SDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASR 126
Query: 333 ---DPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISD 389
+P N + + + + IA G+ YL S IHRDL A N +L +M ++D
Sbjct: 127 IGENPFN---LPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVAD 180
Query: 390 FGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSS 449
FG++R + ++A E + ++V SD+++FGV + EI++ +
Sbjct: 181 FGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPY 240
Query: 450 FGTE 453
G E
Sbjct: 241 AGIE 244
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGMLSNGET-IAVKRLSKNSKQG-EIEFKNEVLLL 294
E IR D F D LG G F V + +A+K ++K + +G E +NE+ +L
Sbjct: 14 EDIRDIYD-FRDV--LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 295 ARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRY-KIIEGIA 353
+++H N+V L L+ + V L FD I + E+ ++I +
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVL 126
Query: 354 RGLLYLHEDSRLRIIHRDLKASNIL---LDSEMNPKISDFGMARLFEMDQTHSDTNRVVG 410
+ YLH+ L I+HRDLK N+L LD + ISDFG+++ M+ S + G
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACG 180
Query: 411 TFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
T GY+APE + +S D +S GV+ ++ G
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 135/313 (43%), Gaps = 39/313 (12%)
Query: 244 DNFSDANKLGQGGFGAVYK-----GMLSNGETIAVKRLSKNSKQG--EIEFKNEVLLLAR 296
D + +LG G F V K L KR S+ S++G E + EV +L +
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 297 LQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGL 356
+ H N++ L R + +L+ E V L F+ +E ++ E+ I+ I G+
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGV 128
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNP----KISDFGMARLFEMDQTHSDTNRVVGTF 412
YLH +I H DLK NI+L + P K+ DFG+A E + + GT
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE---DGVEFKNIFGTP 182
Query: 413 GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNE--- 469
++APE V + +++D++S GV+ ++SG T++ET +T +++E
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFF 242
Query: 470 GAALNLMDPTMRGGSTSEMMKCIHIGLLCVQEN--------VSNRPGMA---SVVNMLNG 518
L +R E K L +QE V N+ M SVVN+ N
Sbjct: 243 SQTSELAKDFIRKLLVKETRKR-----LTIQEALRHPWITPVDNQQAMVRRESVVNLENF 297
Query: 519 DTVTLPAPSKPAF 531
+ SK AF
Sbjct: 298 RKQYVRRRSKLAF 310
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 102/228 (44%), Gaps = 30/228 (13%)
Query: 240 RVATDNFSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLS-KNSKQGEIEFKNEVLLLARL 297
R TD F LG+GGFG V++ + A+KR+ N + + EV LA+L
Sbjct: 2 RYLTD-FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL 60
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHM--------TWEKRYK-- 347
+H +VR LE+ + P L + +E++ T E+R +
Sbjct: 61 EHPGIVRYFNAWLEKNTTEKLQPSSPKVYL-YIQMQLCRKENLKDWMNGRCTIEERERSV 119
Query: 348 ---IIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQ---- 400
I IA + +LH ++HRDLK SNI + K+ DFG+ + D+
Sbjct: 120 CLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 401 ------THSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIV 442
++ VGT YM+PE + +S K DIFS G+++ E++
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 12/205 (5%)
Query: 246 FSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQHRNL 302
+ K+G+G +G V+K E +A+KR+ + + E+ LL L+H+N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
VRL K+ LV+EF + L + FD N + + E + + +GL + H
Sbjct: 64 VRLHDVLHSDKKLTLVFEFC-DQDLKKY-FDSCNGD-LDPEIVKSFLFQLLKGLGFCHSR 120
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMH 422
+ ++HRDLK N+L++ K++DFG+AR F + + VV T Y P+ +
Sbjct: 121 N---VLHRDLKPQNLLINRNGELKLADFGLARAFGI-PVRCYSAEVV-TLWYRPPDVLFG 175
Query: 423 GR-FSVKSDIFSFGVLVLEIVSGQK 446
+ +S D++S G + E+ + +
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAAR 200
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 20/224 (8%)
Query: 244 DNFSDANKLGQGGFGAVYK-----GMLSNGETIAVKRLSKNSKQG--EIEFKNEVLLLAR 296
D + +LG G F V K L KR S+ S++G E + EV +L +
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 297 LQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGL 356
+ H N++ L R + +L+ E V L F+ +E ++ E+ I+ I G+
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGV 128
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNP----KISDFGMARLFEMDQTHSDTNRVVGTF 412
YLH +I H DLK NI+L + P K+ DFG+A E + + GT
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE---DGVEFKNIFGTP 182
Query: 413 GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
++APE V + +++D++S GV+ ++SG T++ET
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 226
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 245 NFSDANKLGQGGFGAVYKG-MLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHR 300
N+ +G+G F V + G+ +AVK + K NS + F+ EV + L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHP 73
Query: 301 NLVRLLGFCLERKERILVYEFVPNASL-DHFIFDPINREHMTWEKRYKIIEGIARGLLYL 359
N+V+L K LV E+ + D+ + +E K +I+ + Y
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQ----YC 129
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H+ I+HRDLKA N+LLD++ N KI+DFG + F + + G Y APE
Sbjct: 130 HQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFG---NKLDAFCGAPPYAAPEL 183
Query: 420 VMHGRFS-VKSDIFSFGVLVLEIVSG 444
++ + D++S GV++ +VSG
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 111/237 (46%), Gaps = 20/237 (8%)
Query: 244 DNFSDANKLGQGGFGAVYK-----GMLSNGETIAVKRLSKNSKQG--EIEFKNEVLLLAR 296
D + +LG G F V K L KR S+ S++G E + EV +L +
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 297 LQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGL 356
+ H N++ L R + +L+ E V L F+ +E ++ E+ I+ I G+
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGV 128
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNP----KISDFGMARLFEMDQTHSDTNRVVGTF 412
YLH +I H DLK NI+L + P K+ DFG+A E + + GT
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE---DGVEFKNIFGTP 182
Query: 413 GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNE 469
++APE V + +++D++S GV+ ++SG T++ET +T +++E
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 251 KLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
+LG+G F V + G + I K+LS Q + + E + L+H N+VR
Sbjct: 29 ELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQ---KLEREARICRLLKHPNIVR 85
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
L E L+++ V L D + RE+ + I+ I +L+ H+
Sbjct: 86 LHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLHCHQ--- 139
Query: 365 LRIIHRDLKASNILLDSEMN---PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVM 421
+ ++HRDLK N+LL S++ K++DFG+A E++ GT GY++PE +
Sbjct: 140 MGVVHRDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSPEVLR 197
Query: 422 HGRFSVKSDIFSFGVLVLEIVSG 444
+ D+++ GV++ ++ G
Sbjct: 198 KDPYGKPVDLWACGVILYILLVG 220
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 17/229 (7%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNL 302
D + +LG G FG V++ + + G K ++ + KNE+ ++ +L H L
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 110
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINRE--HMTWEKRYKIIEGIARGLLYLH 360
+ L ++ E +L+ EF+ L FD I E M+ + + GL ++H
Sbjct: 111 INLHDAFEDKYEMVLILEFLSGGEL----FDRIAAEDYKMSEAEVINYMRQACEGLKHMH 166
Query: 361 EDSRLRIIHRDLKASNILLDSEM--NPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPE 418
E S I+H D+K NI+ +++ + KI DFG+A D+ T + APE
Sbjct: 167 EHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI---VKVTTATAEFAAPE 220
Query: 419 YVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNW 467
V +D+++ GVL ++SG S F E++ E L +W
Sbjct: 221 IVDREPVGFYTDMWAIGVLGYVLLSG--LSPFAGEDDLETLQNVKRCDW 267
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 20/224 (8%)
Query: 244 DNFSDANKLGQGGFGAVYK-----GMLSNGETIAVKRLSKNSKQG--EIEFKNEVLLLAR 296
D + +LG G F V K L KR S+ S++G E + EV +L +
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 297 LQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGL 356
+ H N++ L R + +L+ E V L F+ +E ++ E+ I+ I G+
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGV 128
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNP----KISDFGMARLFEMDQTHSDTNRVVGTF 412
YLH +I H DLK NI+L + P K+ DFG+A E + + GT
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE---DGVEFKNIFGTP 182
Query: 413 GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
++APE V + +++D++S GV+ ++SG T++ET
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 226
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 20/224 (8%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-----LSNGETIAVKRLSKNSKQG--EIEFKNEVLLLAR 296
D + +LG G F V K L KR S+ S++G E + EV +L +
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQ 71
Query: 297 LQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGL 356
+ H N++ L R + +L+ E V L F+ +E ++ E+ I+ I G+
Sbjct: 72 VLHPNIITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGV 128
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNP----KISDFGMARLFEMDQTHSDTNRVVGTF 412
YLH +I H DLK NI+L + P K+ DFG+A E + + GT
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE---DGVEFKNIFGTP 182
Query: 413 GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
++APE V + +++D++S GV+ ++SG T++ET
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 226
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 20/224 (8%)
Query: 244 DNFSDANKLGQGGFGAVYK-----GMLSNGETIAVKRLSKNSKQG--EIEFKNEVLLLAR 296
D + +LG G F V K L KR S+ S++G E + EV +L +
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 297 LQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGL 356
+ H N++ L R + +L+ E V L F+ +E ++ E+ I+ I G+
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGV 128
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNP----KISDFGMARLFEMDQTHSDTNRVVGTF 412
YLH +I H DLK NI+L + P K+ DFG+A E + + GT
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE---DGVEFKNIFGTP 182
Query: 413 GYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
++APE V + +++D++S GV+ ++SG T++ET
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 226
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 15/212 (7%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGE---IEFKNEVLLLARLQ 298
+D + LG GG V+ L + +AVK L + + + F+ E A L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 299 HRNLVRLLGFCLERKER----ILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIAR 354
H +V + +V E+V +L + MT ++ ++I +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQ 127
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMDQTHSDTNRVVGTFG 413
L + H++ IIHRD+K +NIL+ + K+ DFG+AR + + + T V+GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQ 184
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
Y++PE +SD++S G ++ E+++G+
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 10/196 (5%)
Query: 252 LGQGGFGAVYKG-MLSNGETIAVKRLSKNSKQGEI-EFKNEVLLLARLQHRNLVRLLGFC 309
+G GGF V + GE +A+K + KN+ ++ K E+ L L+H+++ +L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 310 LERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIH 369
+ +V E+ P L +I I+++ ++ E+ + I + Y+H H
Sbjct: 78 ETANKIFMVLEYCPGGELFDYI---ISQDRLSEEETRVVFRQIVSAVAYVHSQG---YAH 131
Query: 370 RDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRF-SVK 428
RDLK N+L D K+ DFG+ + ++ + G+ Y APE + + +
Sbjct: 132 RDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH-LQTCCGSLAYAAPELIQGKSYLGSE 190
Query: 429 SDIFSFGVLVLEIVSG 444
+D++S G+L+ ++ G
Sbjct: 191 ADVWSMGILLYVLMCG 206
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 17/207 (8%)
Query: 244 DNFSDANKLGQGGFGAVYK-GMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHR-- 300
D+F ++LG G G V+K +G +A K + K +N+++ ++ H
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQVLHECN 81
Query: 301 --NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+V G E + E + SLD + R + + K+ + +GL Y
Sbjct: 82 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQ-VLKKAGR--IPEQILGKVSIAVIKGLTY 138
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPE 418
L E + +I+HRD+K SNIL++S K+ DFG++ S N VGT YM+PE
Sbjct: 139 LRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMSPE 192
Query: 419 YVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
+ +SV+SDI+S G+ ++E+ G+
Sbjct: 193 RLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 15/212 (7%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGE---IEFKNEVLLLARLQ 298
+D + LG GG V+ L + +AVK L + + + F+ E A L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 299 HRNLVRLLGFCLERKER----ILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIAR 354
H +V + +V E+V +L + MT ++ ++I +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQ 127
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMDQTHSDTNRVVGTFG 413
L + H++ IIHRD+K +NI++ + K+ DFG+AR + + + + T V+GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
Y++PE +SD++S G ++ E+++G+
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 15/212 (7%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGE---IEFKNEVLLLARLQ 298
+D + LG GG V+ L + +AVK L + + + F+ E A L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 299 HRNLVRLLGFCLERKER----ILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIAR 354
H +V + +V E+V +L + MT ++ ++I +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQ 127
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMDQTHSDTNRVVGTFG 413
L + H++ IIHRD+K +NI++ + K+ DFG+AR + + + + T V+GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
Y++PE +SD++S G ++ E+++G+
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 252 LGQGGFGAVYKGMLSNGET-------IAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
LG+GGF ++ +S+ +T I K L Q E + E+ + L H+++V
Sbjct: 49 LGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQRE-KMSMEISIHRSLAHQHVVG 105
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
GF + +V E SL R+ +T + + I G YLH R
Sbjct: 106 FHGFFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLH---R 159
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
R+IHRDLK N+ L+ ++ KI DFG+A E D + GT Y+APE +
Sbjct: 160 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSKKG 217
Query: 425 FSVKSDIFSFGVLVLEIVSGQ 445
S + D++S G ++ ++ G+
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGK 238
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 252 LGQGGFGAVYKGMLSNGET-------IAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
LG+GGF ++ +S+ +T I K L Q E + E+ + L H+++V
Sbjct: 47 LGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQRE-KMSMEISIHRSLAHQHVVG 103
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
GF + +V E SL R+ +T + + I G YLH R
Sbjct: 104 FHGFFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLH---R 157
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
R+IHRDLK N+ L+ ++ KI DFG+A E D + GT Y+APE +
Sbjct: 158 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSKKG 215
Query: 425 FSVKSDIFSFGVLVLEIVSGQ 445
S + D++S G ++ ++ G+
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGK 236
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN---SKQGEIEFKNEVLLLARLQHRNLVRLLG 307
LG+GGF Y+ + E A K + K+ + + E+ + L + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 308 FCLERKERILVYEFVPNASLDHFIFDPINREHMTW-EKRYKIIEGIARGLLYLHEDSRLR 366
F + +V E SL R+ +T E RY + + I +G+ YLH + R
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTI-QGVQYLHNN---R 162
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFS 426
+IHRDLK N+ L+ +M+ KI DFG+A E D + GT Y+APE + S
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK--KXLCGTPNYIAPEVLCKKGHS 220
Query: 427 VKSDIFSFGVLVLEIVSGQ 445
+ DI+S G ++ ++ G+
Sbjct: 221 FEVDIWSLGCILYTLLVGK 239
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQG-EIEFKNEVLLLARLQHRNLVRLLGFC 309
K+G+G +G VYK +G+ L + G + E+ LL L+H N++ L
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 310 LERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY-----LHEDSR 364
L +R V+ A D + +R +K ++ G+ + LLY +H
Sbjct: 88 LSHADR-KVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA 146
Query: 365 LRIIHRDLKASNILLDSE----MNPKISDFGMARLFEMD-QTHSDTNRVVGTFGYMAPEY 419
++HRDLK +NIL+ E KI+D G ARLF + +D + VV TF Y APE
Sbjct: 147 NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPEL 206
Query: 420 VMHGRFSVKS-DIFSFGVLVLEIVSGQ 445
++ R K+ DI++ G + E+++ +
Sbjct: 207 LLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 243 TDNFSDANKLGQGGFGAVYK------GMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLAR 296
T+ + +LG+G F V + G I K+LS Q + + E +
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQ---KLEREARICRL 66
Query: 297 LQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGL 356
L+H N+VRL E L+++ V L D + RE+ + I+ I +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAV 123
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMN---PKISDFGMARLFEMDQTHSDTNRVVGTFG 413
L+ H+ + ++HR+LK N+LL S++ K++DFG+A E++ GT G
Sbjct: 124 LHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPG 178
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + + D+++ GV++ ++ G
Sbjct: 179 YLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN---SKQGEIEFKNEVLLLARLQHRNLVRLLG 307
LG+GGF Y+ + E A K + K+ + + E+ + L + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 308 FCLERKERILVYEFVPNASLDHFIFDPINREHMTW-EKRYKIIEGIARGLLYLHEDSRLR 366
F + +V E SL R+ +T E RY + + I +G+ YLH + R
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTI-QGVQYLHNN---R 162
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFS 426
+IHRDLK N+ L+ +M+ KI DFG+A E D + GT Y+APE + S
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK--KDLCGTPNYIAPEVLCKKGHS 220
Query: 427 VKSDIFSFGVLVLEIVSGQ 445
+ DI+S G ++ ++ G+
Sbjct: 221 FEVDIWSLGCILYTLLVGK 239
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 22/200 (11%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGF- 308
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVF 92
Query: 309 ----CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
LE + + + + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-----LLYQMLVGIKHLHSAG- 146
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
IIHRDLK SNI++ S+ KI DFG+AR T V T Y APE ++
Sbjct: 147 --IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 425 FSVKSDIFSFGVLVLEIVSG 444
+ DI+S G ++ E++ G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 243 TDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNL 302
+D F ++LG+G VY+ + ++ K + +I + E+ +L RL H N+
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI-VRTEIGVLLRLSHPNI 110
Query: 303 VRLLGFCLERKERILVYEFVPNASL-DHFIFDPINREHMTWEKRYKIIEGIARGLLYLHE 361
++L E LV E V L D + E + +I+E +A YLHE
Sbjct: 111 IKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVA----YLHE 166
Query: 362 DSRLRIIHRDLKASNILLDS---EMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPE 418
+ I+HRDLK N+L + + KI+DFG++++ E Q T V GT GY APE
Sbjct: 167 NG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE-HQVLMKT--VCGTPGYCAPE 220
Query: 419 YVMHGRFSVKSDIFSFGVLVLEIVSG 444
+ + + D++S G++ ++ G
Sbjct: 221 ILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS--KNSKQGEIEFKNEVLLLARLQH 299
TD + +LG+G F V + M + G+ A K ++ K S + + + E + L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 300 RNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYL 359
N+VRL E LV++ V L D + RE+ + I+ I + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 360 HEDSRLRIIHRDLKASNILLDSEMN---PKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
H + I+HRDLK N+LL S+ K++DFG+A + DQ GT GY++
Sbjct: 120 HLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ--QAWFGFAGTPGYLS 174
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
PE + + D+++ GV++ ++ G
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 252 LGQGGFGAVYKGMLSNGET-------IAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
LG+GGF ++ +S+ +T I K L Q E + E+ + L H+++V
Sbjct: 23 LGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQRE-KMSMEISIHRSLAHQHVVG 79
Query: 305 LLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
GF + +V E SL R+ +T + + I G YLH R
Sbjct: 80 FHGFFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLH---R 133
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
R+IHRDLK N+ L+ ++ KI DFG+A E D + GT Y+APE +
Sbjct: 134 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSKKG 191
Query: 425 FSVKSDIFSFGVLVLEIVSGQ 445
S + D++S G ++ ++ G+
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGK 212
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 243 TDNFSDANKLGQGGFGA--VYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHR 300
+D + +G G FG + + SN E +AVK + + K E K E++ L+H
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSN-ELVAVKYIERGEKIDE-NVKREIINHRSLRHP 74
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPI-NREHMTWEKRYKIIEGIARGLLYL 359
N+VR L +V E+ L F+ I N + ++ + + G+ Y
Sbjct: 75 NIVRFKEVILTPTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLISGVSYC 130
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNP--KISDFGMARLFEMDQTHSDTNRVVGTFGYMAP 417
H +++ HRDLK N LLD P KI DFG ++ HS VGT Y+AP
Sbjct: 131 HA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAP 184
Query: 418 EYVMHGRFSVK-SDIFSFGVLVLEIVSG 444
E ++ + K +D++S GV + ++ G
Sbjct: 185 EVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN---SKQGEIEFKNEVLLLARLQHRNLVRLLG 307
LG+GGF Y+ + E A K + K+ + + E+ + L + ++V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 308 FCLERKERILVYEFVPNASLDHFIFDPINREHMTW-EKRYKIIEGIARGLLYLHEDSRLR 366
F + +V E SL R+ +T E RY + + I +G+ YLH + R
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTI-QGVQYLHNN---R 146
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFS 426
+IHRDLK N+ L+ +M+ KI DFG+A E D + GT Y+APE + S
Sbjct: 147 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK--KDLCGTPNYIAPEVLCKKGHS 204
Query: 427 VKSDIFSFGVLVLEIVSGQ 445
+ DI+S G ++ ++ G+
Sbjct: 205 FEVDIWSLGCILYTLLVGK 223
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 243 TDNFSDANKLGQGGFGAVYKGMLSN------GETIAVKRLSKNSKQGEIEFKNEVLLLAR 296
TD++ +LG+G F V + + + I K+LS Q + + E +
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQ---KLEREARICRL 86
Query: 297 LQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGL 356
L+H N+VRL E LV++ V L D + RE+ + I I +
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIHQILESV 143
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMN---PKISDFGMARLFEMDQTHSDTNRVVGTFG 413
++H+ I+HRDLK N+LL S+ K++DFG+A E+ GT G
Sbjct: 144 NHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGEQQAWFGFAGTPG 198
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
Y++PE + + DI++ GV++ ++ G
Sbjct: 199 YLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 18/208 (8%)
Query: 243 TDNFSDANKLGQGGFGA--VYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHR 300
+D + +G G FG + + +N E +AVK + + K E K E++ L+H
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQAN-ELVAVKYIERGEKIDE-NVKREIINHRSLRHP 75
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPI-NREHMTWEKRYKIIEGIARGLLYL 359
N+VR L +V E+ L F+ I N + ++ + + G+ Y
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLISGVSYA 131
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNP--KISDFGMARLFEMDQTHSDTNRVVGTFGYMAP 417
H +++ HRDLK N LLD P KI+DFG ++ + HS VGT Y+AP
Sbjct: 132 HA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVL---HSQPKSAVGTPAYIAP 185
Query: 418 EYVMHGRFSVK-SDIFSFGVLVLEIVSG 444
E ++ + K +D++S GV + ++ G
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 19/201 (9%)
Query: 252 LGQGGFGAV-----YKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLL 306
LG+G FG V YK ++L K S + + E+ L L+H ++++L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDM-HMRVEREISYLKLLRHPHIIKLY 75
Query: 307 GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLR 366
+ ++V E+ D+ + ++ MT ++ + + I + Y H R +
Sbjct: 76 DVITTPTDIVMVIEYAGGELFDYIV----EKKRMTEDEGRRFFQQIICAIEYCH---RHK 128
Query: 367 IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFS 426
I+HRDLK N+LLD +N KI+DFG++ + D T+ G+ Y APE V++G+
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIM-TDGNFLKTS--CGSPNYAAPE-VINGKLY 184
Query: 427 V--KSDIFSFGVLVLEIVSGQ 445
+ D++S G+++ ++ G+
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGR 205
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 29/207 (14%)
Query: 252 LGQGGFGAV---YKGMLSNGETIAVKRLSKNSKQGEIEFKN---EVLLLARLQHRNLVRL 305
+G G +G+V Y L + +AVK+LS+ Q I + E+ LL L+H N++ L
Sbjct: 28 VGSGAYGSVCSAYDARLR--QKVAVKKLSR-PFQSLIHARRTYRELRLLKHLKHENVIGL 84
Query: 306 L-----GFCLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRYKIIEGIARGLLYL 359
L +E + + + A L++ + ++ EH+ + ++ + RGL Y+
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-----LVYQLLRGLKYI 139
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H IIHRDLK SN+ ++ + +I DFG+AR Q + V T Y APE
Sbjct: 140 HSAG---IIHRDLKPSNVAVNEDCELRILDFGLAR-----QADEEMTGYVATRWYRAPEI 191
Query: 420 VMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
+++ ++ DI+S G ++ E++ G+
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGE---IEFKNEVLLLARLQ 298
+D + LG GG V+ L +AVK L + + + F+ E A L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 299 HRNLVRLLGFCLERKER------ILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGI 352
H +V + + E +V E+V +L + MT ++ ++I
Sbjct: 71 HPAIVAV--YATGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADA 125
Query: 353 ARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMDQTHSDTNRVVGT 411
+ L + H++ IIHRD+K +NI++ + K+ DFG+AR + + + + T V+GT
Sbjct: 126 CQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
Y++PE +SD++S G ++ E+++G+
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 22/200 (11%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGF- 308
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVF 92
Query: 309 ----CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
LE + + + + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG- 146
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
IIHRDLK SNI++ S+ KI DFG+AR T V T Y APE ++
Sbjct: 147 --IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 425 FSVKSDIFSFGVLVLEIVSG 444
+ DI+S G ++ E++ G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLS--KNSKQGEIEFKNEVLLLARLQH 299
TD + +LG+G F V + M + G+ A K ++ K S + + + E + L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 300 RNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYL 359
N+VRL E LV++ V L D + RE+ + I+ I + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 360 HEDSRLRIIHRDLKASNILLDSEMN---PKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
H + I+HRDLK N+LL S+ K++DFG+A + DQ GT GY++
Sbjct: 120 HLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ--QAWFGFAGTPGYLS 174
Query: 417 PEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
PE + + D+++ GV++ ++ G
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 16/166 (9%)
Query: 352 IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT 411
+A+G+ +L + + IHRDL A NILL + KI DFG+AR D +
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGA 471
+MAPE + ++++SD++SFGVL+ EI S G + + E R EG
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FCRRLKEGT 320
Query: 472 ALNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVNMLN 517
+ D T T EM + + L C S RP + +V L
Sbjct: 321 RMRAPDYT-----TPEMYQTM---LDCWHGEPSQRPTFSELVEHLG 358
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 16/166 (9%)
Query: 352 IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT 411
+A+G+ +L + + IHRDL A NILL + KI DFG+AR D +
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGA 471
+MAPE + ++++SD++SFGVL+ EI S G + + E R EG
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FCRRLKEGT 318
Query: 472 ALNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVNMLN 517
+ D T T EM + + L C S RP + +V L
Sbjct: 319 RMRAPDYT-----TPEMYQTM---LDCWHGEPSQRPTFSELVEHLG 356
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 16/166 (9%)
Query: 352 IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT 411
+A+G+ +L + + IHRDL A NILL + KI DFG+AR D +
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGA 471
+MAPE + ++++SD++SFGVL+ EI S G + + E R EG
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC-----RRLKEGT 313
Query: 472 ALNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVNMLN 517
+ D T T EM + + L C S RP + +V L
Sbjct: 314 RMRAPDYT-----TPEMYQTM---LDCWHGEPSQRPTFSELVEHLG 351
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 29/207 (14%)
Query: 252 LGQGGFGAV---YKGMLSNGETIAVKRLSKNSKQGEIEFKN---EVLLLARLQHRNLVRL 305
+G G +G+V Y L + +AVK+LS+ Q I + E+ LL L+H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSR-PFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 306 L-----GFCLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRYKIIEGIARGLLYL 359
L +E + + + A L++ + ++ EH+ + ++ + RGL Y+
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-----LVYQLLRGLKYI 147
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H IIHRDLK SN+ ++ + +I DFG+AR Q + V T Y APE
Sbjct: 148 HSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRAPEI 199
Query: 420 VMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
+++ ++ DI+S G ++ E++ G+
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 15/211 (7%)
Query: 239 IRVATDNFSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNSKQGEIEFKN-----EVL 292
++ + + LG+G F VYK N + +A+K++ + + N E+
Sbjct: 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK 64
Query: 293 LLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGI 352
LL L H N++ LL + LV++F+ L+ I D N +T +
Sbjct: 65 LLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKD--NSLVLTPSHIKAYMLMT 121
Query: 353 ARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTF 412
+GL YLH+ I+HRDLK +N+LLD K++DFG+A+ F + ++VV T
Sbjct: 122 LQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFG-SPNRAYXHQVV-TR 176
Query: 413 GYMAPEYVMHGR-FSVKSDIFSFGVLVLEIV 442
Y APE + R + V D+++ G ++ E++
Sbjct: 177 WYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 29/207 (14%)
Query: 252 LGQGGFGAV---YKGMLSNGETIAVKRLSKNSKQGEIEFKN---EVLLLARLQHRNLVRL 305
+G G +G+V Y L + +AVK+LS+ Q I + E+ LL L+H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSR-PFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 306 L-----GFCLERKERILVYEFVPNASLDHFI-FDPINREHMTWEKRYKIIEGIARGLLYL 359
L +E + + + A L++ + ++ EH+ + ++ + RGL Y+
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-----LVYQLLRGLKYI 147
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
H IIHRDLK SN+ ++ + +I DFG+AR Q + V T Y APE
Sbjct: 148 HSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRAPEI 199
Query: 420 VMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
+++ ++ DI+S G ++ E++ G+
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 16/166 (9%)
Query: 352 IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGT 411
+A+G+ +L + + IHRDL A NILL + KI DFG+AR D +
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 412 FGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGA 471
+MAPE + ++++SD++SFGVL+ EI S G + + E R EG
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC-----RRLKEGT 311
Query: 472 ALNLMDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVNMLN 517
+ D T T EM + + L C S RP + +V L
Sbjct: 312 RMRAPDYT-----TPEMYQTM---LDCWHGEPSQRPTFSELVEHLG 349
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 12/203 (5%)
Query: 246 FSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFK--NEVLLLARLQHRNL 302
+ K+G+G +G V+K E +A+KR+ + + E+ LL L+H+N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
VRL K+ LV+EF + L + FD N + + E + + +GL + H
Sbjct: 64 VRLHDVLHSDKKLTLVFEFC-DQDLKKY-FDSCNGD-LDPEIVKSFLFQLLKGLGFCHSR 120
Query: 363 SRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMH 422
+ ++HRDLK N+L++ K+++FG+AR F + + VV T Y P+ +
Sbjct: 121 N---VLHRDLKPQNLLINRNGELKLANFGLARAFGI-PVRCYSAEVV-TLWYRPPDVLFG 175
Query: 423 GR-FSVKSDIFSFGVLVLEIVSG 444
+ +S D++S G + E+ +
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANA 198
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 24/199 (12%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVF 92
Query: 310 LERK------ERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
+K + LV E + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 93 TPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY-----LLYQMLXGIKHLHSAG 146
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHG 423
IIHRDLK SNI++ S+ KI DFG+AR T V T Y APE ++
Sbjct: 147 ---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 424 RFSVKSDIFSFGVLVLEIV 442
+ DI+S G ++ E+V
Sbjct: 201 GYKENVDIWSVGCIMGEMV 219
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 22/200 (11%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGF- 308
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVF 92
Query: 309 ----CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
LE + + + + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG- 146
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
IIHRDLK SNI++ S+ KI DFG+AR + T VV + Y APE ++
Sbjct: 147 --IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMG 201
Query: 425 FSVKSDIFSFGVLVLEIVSG 444
+ DI+S G ++ E++ G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 22/200 (11%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGF- 308
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVF 92
Query: 309 ----CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
LE + + + + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG- 146
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
IIHRDLK SNI++ S+ KI DFG+AR + T VV + Y APE ++
Sbjct: 147 --IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPEVVTRY-YRAPEVILGMG 201
Query: 425 FSVKSDIFSFGVLVLEIVSG 444
+ DI+S G ++ E++ G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 22/200 (11%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGF- 308
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVF 92
Query: 309 ----CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
LE + + + + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG- 146
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
IIHRDLK SNI++ S+ KI DFG+AR T V T Y APE ++
Sbjct: 147 --IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 425 FSVKSDIFSFGVLVLEIVSG 444
+ DI+S G ++ E++ G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 97/220 (44%), Gaps = 26/220 (11%)
Query: 240 RVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQH 299
+V +NF LG G +G V+ +G K K+ I K + R +
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 300 RNLVRLLGFCLERKERILV---YEFVPNASLDHFIFDPIN----------REHMTWEKRY 346
+ L + R+ LV Y F L H I D IN RE T +
Sbjct: 110 QVLEHI------RQSPFLVTLHYAFQTETKL-HLILDYINGGELFTHLSQRERFTEHEVQ 162
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
+ I L +LH +L II+RD+K NILLDS + ++DFG+++ F D+T +
Sbjct: 163 IYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD 219
Query: 407 RVVGTFGYMAPEYVMHGR--FSVKSDIFSFGVLVLEIVSG 444
GT YMAP+ V G D +S GVL+ E+++G
Sbjct: 220 -FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 134/309 (43%), Gaps = 52/309 (16%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 77 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 126
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 182
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAALNL 475
PE++ + R+ +S ++S G+L+ ++V G F +EE G
Sbjct: 183 PEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEEI-----------IRGQVF-- 227
Query: 476 MDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVNMLNGDTVTLPAPSKPAFFMKC 535
R +SE C H+ C+ S+RP + N V LP +
Sbjct: 228 ----FRQRVSSE---CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSL 280
Query: 536 SVIPETSSP 544
S P S P
Sbjct: 281 SPGPSKSGP 289
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 15/212 (7%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGE---IEFKNEVLLLARLQ 298
+D + LG GG V+ L +AVK L + + + F+ E A L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 299 HRNLVRLLGFCLERKER----ILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIAR 354
H +V + +V E+V +L + MT ++ ++I +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQ 127
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMDQTHSDTNRVVGTFG 413
L + H++ IIHRD+K +NI++ + K+ DFG+AR + + + + T V+GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
Y++PE +SD++S G ++ E+++G+
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 252 LGQGGFGAVYKGMLSNGETI-AVKRLSKNSKQGEIEFKNEV----LLLARLQHRNLVRLL 306
+G+G FG V E AVK L K + + E K+ + +LL ++H LV L
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL- 104
Query: 307 GFCLERKERI-LVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSR 364
F + +++ V +++ L F + RE E R + IA L YLH
Sbjct: 105 HFSFQTADKLYFVLDYINGGEL----FYHLQRERCFLEPRARFYAAEIASALGYLHS--- 157
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
L I++RDLK NILLDS+ + ++DFG+ + E + +S T+ GT Y+APE +
Sbjct: 158 LNIVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPEYLAPEVLHKQP 215
Query: 425 FSVKSDIFSFGVLVLEIVSG 444
+ D + G ++ E++ G
Sbjct: 216 YDRTVDWWCLGAVLYEMLYG 235
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 22/200 (11%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGF- 308
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVF 92
Query: 309 ----CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
LE + + + + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG- 146
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
IIHRDLK SNI++ S+ KI DFG+AR T V T Y APE ++
Sbjct: 147 --IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 425 FSVKSDIFSFGVLVLEIVSG 444
+ DI+S G ++ E++ G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 243 TDNFSDANKLGQGGFGA--VYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHR 300
+D + +G G FG + + SN E +AVK + + K K E++ L+H
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSN-ELVAVKYIERGEKIAA-NVKREIINHRSLRHP 75
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPI-NREHMTWEKRYKIIEGIARGLLYL 359
N+VR L +V E+ L F+ I N + ++ + + G+ Y
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLISGVSYC 131
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNP--KISDFGMARLFEMDQTHSDTNRVVGTFGYMAP 417
H +++ HRDLK N LLD P KI DFG ++ + HS VGT Y+AP
Sbjct: 132 HA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL---HSQPKSTVGTPAYIAP 185
Query: 418 EYVMHGRFSVK-SDIFSFGVLVLEIVSG 444
E ++ + K +D++S GV + ++ G
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 22/200 (11%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGF- 308
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 37 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVF 93
Query: 309 ----CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
LE + + + + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 94 TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG- 147
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
IIHRDLK SNI++ S+ KI DFG+AR T V T Y APE ++
Sbjct: 148 --IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG 202
Query: 425 FSVKSDIFSFGVLVLEIVSG 444
+ DI+S G ++ E++ G
Sbjct: 203 YKENVDIWSVGCIMGEMIKG 222
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 30/219 (13%)
Query: 236 FETIRVATDNFSDANKLGQGGFGAVYK----GMLSNGETIAVKRLSK----NSKQGEIEF 287
FE +RV LG+GG+G V++ + G+ A+K L K + +
Sbjct: 19 FELLRV----------LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHT 68
Query: 288 KNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKR-- 345
K E +L ++H +V L+ + L+ E++ L F + RE + E
Sbjct: 69 KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL----FMQLEREGIFMEDTAC 124
Query: 346 YKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDT 405
+ + E I+ L +LH+ II+RDLK NI+L+ + + K++DFG+ + E + T
Sbjct: 125 FYLAE-ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVT 178
Query: 406 NRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+ GT YMAPE +M + D +S G L+ ++++G
Sbjct: 179 HXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 24/199 (12%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 92
Query: 310 LERK------ERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
+K + LV E + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 93 TPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY-----LLYQMLXGIKHLHSAG 146
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHG 423
IIHRDLK SNI++ S+ KI DFG+AR T V T Y APE ++
Sbjct: 147 ---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 424 RFSVKSDIFSFGVLVLEIV 442
+ DI+S G ++ E+V
Sbjct: 201 GYKENVDIWSVGCIMGEMV 219
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 30/219 (13%)
Query: 236 FETIRVATDNFSDANKLGQGGFGAVYK----GMLSNGETIAVKRLSK----NSKQGEIEF 287
FE +RV LG+GG+G V++ + G+ A+K L K + +
Sbjct: 19 FELLRV----------LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHT 68
Query: 288 KNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKR-- 345
K E +L ++H +V L+ + L+ E++ L F + RE + E
Sbjct: 69 KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL----FMQLEREGIFMEDTAC 124
Query: 346 YKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDT 405
+ + E I+ L +LH+ II+RDLK NI+L+ + + K++DFG+ + D T + T
Sbjct: 125 FYLAE-ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT 180
Query: 406 NRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
GT YMAPE +M + D +S G L+ ++++G
Sbjct: 181 --FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 243 TDNFSDANKLGQGGFGA--VYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHR 300
+D + +G G FG + + L+ E +AVK + + + E + E++ L+H
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTK-ELVAVKYIERGAAIDE-NVQREIINHRSLRHP 76
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLH 360
N+VR L ++ E+ L I N + ++ + + G+ Y H
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERI---CNAGRFSEDEARFFFQQLLSGVSYCH 133
Query: 361 EDSRLRIIHRDLKASNILLDSEMNP--KISDFGMARLFEMDQTHSDTNRVVGTFGYMAPE 418
++I HRDLK N LLD P KI DFG ++ + HS VGT Y+APE
Sbjct: 134 S---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL---HSQPKSTVGTPAYIAPE 187
Query: 419 YVMHGRFSVK-SDIFSFGVLVLEIVSG 444
++ + K +D++S GV + ++ G
Sbjct: 188 VLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 22/200 (11%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGF- 308
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVF 92
Query: 309 ----CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
LE + + + + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG- 146
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
IIHRDLK SNI++ S+ KI DFG+AR T V T Y APE ++
Sbjct: 147 --IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 425 FSVKSDIFSFGVLVLEIVSG 444
+ DI+S G ++ E++ G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVKRLSKNSKQG---EIEFKNEVLLLARLQHRNLVRLLGF 308
+G+G +G V++G GE +AVK S ++ E E N V+L +H N++ +
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVML----RHENILGFIAS 99
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLH-----EDS 363
+ + + + ++D + + +I+ IA GL +LH
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 159
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDT--NRVVGTFGYMAPEYVM 421
+ I HRDLK+ NIL+ I+D G+A + D N VGT YMAPE V+
Sbjct: 160 KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE-VL 218
Query: 422 HGRFSV-------KSDIFSFGVLVLEI 441
V + DI++FG+++ E+
Sbjct: 219 DETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 24/199 (12%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 29 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 85
Query: 310 LERK------ERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
+K + LV E + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 86 TPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY-----LLYQMLXGIKHLHSAG 139
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHG 423
IIHRDLK SNI++ S+ KI DFG+AR T V T Y APE ++
Sbjct: 140 ---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGM 193
Query: 424 RFSVKSDIFSFGVLVLEIV 442
+ DI+S G ++ E+V
Sbjct: 194 GYKENVDIWSVGCIMGEMV 212
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 100/198 (50%), Gaps = 22/198 (11%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGF- 308
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVF 92
Query: 309 ----CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
LE + + + + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 93 TPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG- 146
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
IIHRDLK SNI++ S+ KI DFG+AR + T VV + Y APE ++
Sbjct: 147 --IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMG 201
Query: 425 FSVKSDIFSFGVLVLEIV 442
+ DI+S G ++ E+V
Sbjct: 202 YKENVDIWSVGCIMGEMV 219
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 43/216 (19%)
Query: 251 KLGQGGFGAVYKGMLSNGETIAV-------KRLSKNSKQGEIEFKNEVLLLARLQHRNLV 303
++G+G F VYKG L T+ V ++L+K+ +Q FK E L LQH N+V
Sbjct: 33 EIGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQ---RFKEEAEXLKGLQHPNIV 88
Query: 304 RLL----GFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIE--------- 350
R +K +LV E + +L ++ KR+K+ +
Sbjct: 89 RFYDSWESTVKGKKCIVLVTELXTSGTLKTYL------------KRFKVXKIKVLRSWCR 136
Query: 351 GIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNP-KISDFGMARLFEMDQTHSDTNRVV 409
I +GL +LH + IIHRDLK NI + KI D G+A L + S V+
Sbjct: 137 QILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVI 191
Query: 410 GTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
GT + APE ++ D+++FG LE + +
Sbjct: 192 GTPEFXAPE-XYEEKYDESVDVYAFGXCXLEXATSE 226
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 15/212 (7%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGE---IEFKNEVLLLARLQ 298
+D + LG GG V+ L +AVK L + + + F+ E A L
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 299 HRNLVRLLGFCLERKER----ILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIAR 354
H +V + +V E+V +L + MT ++ ++I +
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQ 144
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR-LFEMDQTHSDTNRVVGTFG 413
L + H++ IIHRD+K +NI++ + K+ DFG+AR + + + + T V+GT
Sbjct: 145 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 201
Query: 414 YMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
Y++PE +SD++S G ++ E+++G+
Sbjct: 202 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 24/199 (12%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 74 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 130
Query: 310 LERK------ERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
+K + LV E + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 131 TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 184
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHG 423
IIHRDLK SNI++ S+ KI DFG+AR + T VV + Y APE ++
Sbjct: 185 ---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGM 238
Query: 424 RFSVKSDIFSFGVLVLEIV 442
+ DI+S G ++ E+V
Sbjct: 239 GYKENVDIWSVGCIMGEMV 257
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 105/235 (44%), Gaps = 37/235 (15%)
Query: 224 VEETIAKSLQFDFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQG 283
V+ TIAK +Q ++G+G +G V+ G GE +AVK +++
Sbjct: 31 VQRTIAKQIQM--------------VKQIGKGRYGEVWMGKW-RGEKVAVKVFF-TTEEA 74
Query: 284 EIEFKNEVLLLARLQHRNLVRLLGFCLE----RKERILVYEFVPNASLDHFIFDPINREH 339
+ E+ ++H N++ + ++ + L+ ++ N SL +D +
Sbjct: 75 SWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSL----YDYLKSTT 130
Query: 340 MTWEKRYKIIEGIARGLLYLHED-----SRLRIIHRDLKASNILLDSEMNPKISDFGMAR 394
+ + K+ GL +LH + + I HRDLK+ NIL+ I+D G+A
Sbjct: 131 LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 190
Query: 395 LFEMDQTHSDT--NRVVGTFGYMAPEYV------MHGRFSVKSDIFSFGVLVLEI 441
F D D N VGT YM PE + H + + +D++SFG+++ E+
Sbjct: 191 KFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 22/200 (11%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGF- 308
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 38 AQGIVCAAYDAILER--NVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVF 94
Query: 309 ----CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
LE + + + + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 95 TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG- 148
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
IIHRDLK SNI++ S+ KI DFG+AR T V T Y APE ++
Sbjct: 149 --IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMVPFVVTRYYRAPEVILGMG 203
Query: 425 FSVKSDIFSFGVLVLEIVSG 444
+ DI+S G ++ E++ G
Sbjct: 204 YKENVDIWSVGCIMGEMIKG 223
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 39/242 (16%)
Query: 230 KSLQFDFETIRVATDNFSDANKLGQGGFGAV--YKGMLSNGETIAVKRLSKNSKQGEIEF 287
++L F + + ++ KLG+GGF V +G L +G A+KR+ + +Q E
Sbjct: 15 ENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEA 73
Query: 288 KNEVLLLARLQHRNLVRLLGFCLE----RKERILVYEFVPNASLDHFIFDPINR-----E 338
+ E + H N++RL+ +CL + E L+ F +L ++ I R
Sbjct: 74 QREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTL----WNEIERLKDKGN 129
Query: 339 HMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEM 398
+T ++ ++ GI RGL +H HRDLK +NILL E P + D G M
Sbjct: 130 FLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLG-----SM 181
Query: 399 DQT--HSDTNRVV----------GTFGYMAPEYV---MHGRFSVKSDIFSFGVLVLEIVS 443
+Q H + +R T Y APE H ++D++S G ++ ++
Sbjct: 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMF 241
Query: 444 GQ 445
G+
Sbjct: 242 GE 243
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
Query: 333 DPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGM 392
D +E +T E +ARG+ +L S + IHRDL A NILL KI DFG+
Sbjct: 189 DGFYKEPITMEDLISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGL 245
Query: 393 ARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVS 443
AR + + +MAPE + +S KSD++S+GVL+ EI S
Sbjct: 246 ARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 244 DNFSDANKLGQGGFGAVYKGML-SNGETIAVK--RLSKNSKQGEIEFKNEVLLLARLQHR 300
++ + ++G G G V+K G IAVK R S N ++ + + ++L
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCP 84
Query: 301 NLVRLLGFCLERKERILVYEFVPNAS--LDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
+V+ G + + + E + + L + PI + K+ I + L Y
Sbjct: 85 YIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILG-----KMTVAIVKALYY 139
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPE 418
L E + +IHRD+K SNILLD K+ DFG++ D+ +R G YMAPE
Sbjct: 140 LKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK---DRSAGCAAYMAPE 194
Query: 419 YV-----MHGRFSVKSDIFSFGVLVLEIVSGQ 445
+ + +++D++S G+ ++E+ +GQ
Sbjct: 195 RIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVKRLSKNSKQG---EIEFKNEVLLLARLQHRNLVRLLGF 308
+G+G +G V++G GE +AVK S ++ E E N V+L +H N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVML----RHENILGFIAS 70
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLH-----EDS 363
+ + + + ++D + + +I+ IA GL +LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 130
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDT--NRVVGTFGYMAPEYVM 421
+ I HRDLK+ NIL+ I+D G+A + D N VGT YMAPE V+
Sbjct: 131 KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE-VL 189
Query: 422 HGRFSV-------KSDIFSFGVLVLEI 441
V + DI++FG+++ E+
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 136/311 (43%), Gaps = 52/311 (16%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 77 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 126
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 182
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAALNL 475
PE++ + R+ +S ++S G+L+ ++V G F +EE G
Sbjct: 183 PEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEEI-----------IRGQVF-- 227
Query: 476 MDPTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVNMLNGDTVTLPAPSKPAFFMKC 535
R +SE C H+ C+ S+RP + N V LP +
Sbjct: 228 ----FRQRVSSE---CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSL 280
Query: 536 SVIPETSSPLD 546
S P ++ L+
Sbjct: 281 SPGPSKAAALE 291
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVKRLSKNSKQG---EIEFKNEVLLLARLQHRNLVRLLGF 308
+G+G +G V++G GE +AVK S ++ E E N V+L +H N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVML----RHENILGFIAS 70
Query: 309 CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLH-----EDS 363
+ + + + ++D + + +I+ IA GL +LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 130
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDT--NRVVGTFGYMAPEYVM 421
+ I HRDLK+ NIL+ I+D G+A + D N VGT YMAPE V+
Sbjct: 131 KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE-VL 189
Query: 422 HGRFSV-------KSDIFSFGVLVLEI 441
V + DI++FG+++ E+
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 243 TDNFSDANKLGQGGFGA--VYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHR 300
+D + +G G FG + + SN E +AVK + + K E K E++ L+H
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSN-ELVAVKYIERGEKIDE-NVKREIINHRSLRHP 75
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPI-NREHMTWEKRYKIIEGIARGLLYL 359
N+VR L +V E+ L F+ I N + ++ + + G+ Y
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLISGVSYC 131
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNP--KISDFGMARLFEMDQTHSDTNRVVGTFGYMAP 417
H +++ HRDLK N LLD P KI FG ++ + HS VGT Y+AP
Sbjct: 132 HA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVL---HSQPKSTVGTPAYIAP 185
Query: 418 EYVMHGRFSVK-SDIFSFGVLVLEIVSG 444
E ++ + K +D++S GV + ++ G
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 220 EDENVEETIAKSLQFDF-------ETIRVATDNFSDANKLGQGGFGAV-YKGMLSNGETI 271
E E+V+E +AK+ + DF D F LG G FG V + G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 272 AVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLD 328
A+K L K K EIE NE +L + LV+L + +V E+ P +
Sbjct: 70 AMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM- 128
Query: 329 HFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKI 387
F + R E + I YLH L +I+RDLK N+++D + K+
Sbjct: 129 ---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 182
Query: 388 SDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+DFG+A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 183 TDFGLAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 30/209 (14%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 91 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 140
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 196
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSG 444
PE++ + R+ +S ++S G+L+ ++V G
Sbjct: 197 PEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 30/209 (14%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 92 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 141
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 197
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSG 444
PE++ + R+ +S ++S G+L+ ++V G
Sbjct: 198 PEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 22/198 (11%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGF- 308
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVF 92
Query: 309 ----CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
LE + + + + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 93 TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG- 146
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
IIHRDLK SNI++ S+ KI DFG+AR T V T Y APE ++
Sbjct: 147 --IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 425 FSVKSDIFSFGVLVLEIV 442
+ DI+S G ++ E+V
Sbjct: 202 YKENVDIWSVGCIMGEMV 219
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 30/209 (14%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 92 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 141
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 197
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSG 444
PE++ + R+ +S ++S G+L+ ++V G
Sbjct: 198 PEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 24/199 (12%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 74 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 130
Query: 310 LERK------ERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
+K + LV E + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 131 TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 184
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHG 423
IIHRDLK SNI++ S+ KI DFG+AR T V T Y APE ++
Sbjct: 185 ---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGM 238
Query: 424 RFSVKSDIFSFGVLVLEIV 442
+ DI+S G ++ E+V
Sbjct: 239 GYKENVDIWSVGCIMGEMV 257
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 110/236 (46%), Gaps = 23/236 (9%)
Query: 219 LEDENVEETIAKSLQFDFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSK 278
L+D N + K L D +T +++ +G G FG V++ L + +A+K++ +
Sbjct: 18 LDDPN---KVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQ 74
Query: 279 NSKQGEIEFKNEVLLLARL-QHRNLVRLLGFCL---ERKERI---LVYEFVPNASLDHFI 331
+ + FKN L + R+ +H N+V L F ++K+ + LV E+VP
Sbjct: 75 DKR-----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASR 129
Query: 332 FDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNP-KISDF 390
++ M + + R L Y+H + I HRD+K N+LLD K+ DF
Sbjct: 130 HYAKLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDF 186
Query: 391 GMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHG-RFSVKSDIFSFGVLVLEIVSGQ 445
G A++ + + + + Y APE + ++ DI+S G ++ E++ GQ
Sbjct: 187 GSAKILIAGEPNVSX---ICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 30/209 (14%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 91 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 140
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 196
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSG 444
PE++ + R+ +S ++S G+L+ ++V G
Sbjct: 197 PEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 243 TDNFSDANKLGQGGFGA--VYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHR 300
+D + +G G FG + + SN E +AVK + + K E K E++ L+H
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSN-ELVAVKYIERGEKIDE-NVKREIINHRSLRHP 75
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPI-NREHMTWEKRYKIIEGIARGLLYL 359
N+VR L +V E+ L F+ I N + ++ + + G+ Y
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLISGVSYC 131
Query: 360 HEDSRLRIIHRDLKASNILLDSEMNP--KISDFGMARLFEMDQTHSDTNRVVGTFGYMAP 417
H +++ HRDLK N LLD P KI FG ++ + HS VGT Y+AP
Sbjct: 132 HA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVL---HSQPKDTVGTPAYIAP 185
Query: 418 EYVMHGRFSVK-SDIFSFGVLVLEIVSG 444
E ++ + K +D++S GV + ++ G
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 16/206 (7%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLV 303
+ + A LG+G FG V++ + ++ + + + K ++ K E+ +L +HRN++
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNIL 64
Query: 304 RLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKI--IEGIARGLLYLHE 361
L +E ++++EF+ + LD IF+ IN +R + + + L +LH
Sbjct: 65 HLHESFESMEELVMIFEFI--SGLD--IFERINTSAFELNEREIVSYVHQVCEALQFLHS 120
Query: 362 DSRLRIIHRDLKASNILLDSEMNP--KISDFGMARLFEMDQTHSDTNRVVGTF-GYMAPE 418
+ I H D++ NI+ + + KI +FG AR + D R++ T Y APE
Sbjct: 121 HN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP----GDNFRLLFTAPEYYAPE 173
Query: 419 YVMHGRFSVKSDIFSFGVLVLEIVSG 444
H S +D++S G LV ++SG
Sbjct: 174 VHQHDVVSTATDMWSLGTLVYVLLSG 199
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 30/209 (14%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 92 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 141
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 197
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSG 444
PE++ + R+ +S ++S G+L+ ++V G
Sbjct: 198 PEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 220 EDENVEETIAKSLQFDF-------ETIRVATDNFSDANKLGQGGFGAV-YKGMLSNGETI 271
E E+V+E +AK+ + DF D F LG G FG V + G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 272 AVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLD 328
A+K L K K +IE NE +L + LV+L + +V E+VP +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM- 128
Query: 329 HFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKI 387
F + R E + I YLH L +I+RDLK N+L+D + ++
Sbjct: 129 ---FSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 388 SDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 183 TDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 220 EDENVEETIAKSLQFDF-------ETIRVATDNFSDANKLGQGGFGAV-YKGMLSNGETI 271
E E+V+E +AK+ + DF D F LG G FG V + G
Sbjct: 12 EQESVKEFLAKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHY 70
Query: 272 AVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLD 328
A+K L K K +IE NE +L + LV+L + +V E+VP +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM- 129
Query: 329 HFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKI 387
F + R E + I YLH L +I+RDLK N+L+D + ++
Sbjct: 130 ---FSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 388 SDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 184 TDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 30/209 (14%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 105 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 154
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 210
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSG 444
PE++ + R+ +S ++S G+L+ ++V G
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 100/202 (49%), Gaps = 30/202 (14%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGF- 308
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVF 92
Query: 309 ----CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
LE + + + + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG- 146
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARL----FEMDQTHSDTNRVVGTFGYMAPEYV 420
IIHRDLK SNI++ S+ KI DFG+AR F M+ V T Y APE +
Sbjct: 147 --IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPE-------VVTRYYRAPEVI 197
Query: 421 MHGRFSVKSDIFSFGVLVLEIV 442
+ + DI+S G ++ E+V
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMV 219
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 30/209 (14%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 111 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 160
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 161 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 216
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSG 444
PE++ + R+ +S ++S G+L+ ++V G
Sbjct: 217 PEWIRYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 24/199 (12%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 35 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 91
Query: 310 LERK------ERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
+K + LV E + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 92 TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 145
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHG 423
IIHRDLK SNI++ S+ KI DFG+AR T V T Y APE ++
Sbjct: 146 ---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGM 199
Query: 424 RFSVKSDIFSFGVLVLEIV 442
+ DI+S G ++ E+V
Sbjct: 200 GYKENVDIWSVGCIMGEMV 218
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 24/199 (12%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 92
Query: 310 LERK------ERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
+K + LV E + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 93 TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 146
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHG 423
IIHRDLK SNI++ S+ KI DFG+AR T V T Y APE ++
Sbjct: 147 ---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 424 RFSVKSDIFSFGVLVLEIV 442
+ DI+S G ++ E+V
Sbjct: 201 GYKENVDIWSVGCIMGEMV 219
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 23/233 (9%)
Query: 246 FSDANKLGQGGFGAVYKGMLSNGETI--AVKRLSKNSKQGEIEFKNEVLLLARLQHRNLV 303
++ N +G+G +G V K + G I A K++ K + FK E+ ++ L H N++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 304 RLLGFCLERKERILVYEFVPNASL-DHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
RL + + LV E L + + + RE +I++ + + Y H
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRE----SDAARIMKDVLSAVAYCH-- 123
Query: 363 SRLRIIHRDLKASNILL--DSEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
+L + HRDLK N L DS +P K+ DFG+A F+ + VGT Y++P+
Sbjct: 124 -KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---VGTPYYVSPQ- 178
Query: 420 VMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET-----EDLLTYAWRNW 467
V+ G + + D +S GV++ ++ G S T+ E E T+ ++W
Sbjct: 179 VLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDW 231
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 30/209 (14%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 105 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 154
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 210
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSG 444
PE++ + R+ +S ++S G+L+ ++V G
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 30/209 (14%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 104 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 153
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 209
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSG 444
PE++ + R+ +S ++S G+L+ ++V G
Sbjct: 210 PEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 24/199 (12%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 37 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 93
Query: 310 LERK------ERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
+K + LV E + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 94 TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 147
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHG 423
IIHRDLK SNI++ S+ KI DFG+AR T V T Y APE ++
Sbjct: 148 ---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGM 201
Query: 424 RFSVKSDIFSFGVLVLEIV 442
+ DI+S G ++ E+V
Sbjct: 202 GYKENVDIWSVGCIMGEMV 220
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 30/209 (14%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 104 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 153
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 209
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSG 444
PE++ + R+ +S ++S G+L+ ++V G
Sbjct: 210 PEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 30/209 (14%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 105 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 154
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 210
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSG 444
PE++ + R+ +S ++S G+L+ ++V G
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 220 EDENVEETIAKSLQFDF-------ETIRVATDNFSDANKLGQGGFGAV-YKGMLSNGETI 271
E E+V+E +AK+ + DF D F +G G FG V + G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHY 69
Query: 272 AVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLD 328
A+K L K K +IE NE +L + LV+L + +V E+VP +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM- 128
Query: 329 HFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKI 387
F + R E + I YLH L +I+RDLK N+L+D + K+
Sbjct: 129 ---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKV 182
Query: 388 SDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 183 ADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 220 EDENVEETIAKSLQFDF-------ETIRVATDNFSDANKLGQGGFGAV-YKGMLSNGETI 271
E E+V+E +AK+ + DF D F LG G FG V + G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 272 AVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLD 328
A+K L K K +IE NE +L + LV+L + +V E+VP +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM- 128
Query: 329 HFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKI 387
F + R E + I YLH L +I+RDLK N+L+D + ++
Sbjct: 129 ---FSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 388 SDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 183 TDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 24/199 (12%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 29 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 85
Query: 310 LERK------ERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
+K + LV E + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 86 TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 139
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHG 423
IIHRDLK SNI++ S+ KI DFG+AR T V T Y APE ++
Sbjct: 140 ---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGM 193
Query: 424 RFSVKSDIFSFGVLVLEIV 442
+ DI+S G ++ E+V
Sbjct: 194 GYKENVDIWSVGCIMGEMV 212
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 24/199 (12%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 37 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 93
Query: 310 LERK------ERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
+K + LV E + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 94 TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 147
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHG 423
IIHRDLK SNI++ S+ KI DFG+AR T V T Y APE ++
Sbjct: 148 ---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGM 201
Query: 424 RFSVKSDIFSFGVLVLEIV 442
+ DI+S G ++ E+V
Sbjct: 202 GYKENVDIWSVGCIMGEMV 220
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 30/209 (14%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 104 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 153
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 209
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSG 444
PE++ + R+ +S ++S G+L+ ++V G
Sbjct: 210 PEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 24/199 (12%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 92
Query: 310 LERK------ERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
+K + LV E + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 93 TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 146
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHG 423
IIHRDLK SNI++ S+ KI DFG+AR T V T Y APE ++
Sbjct: 147 ---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 424 RFSVKSDIFSFGVLVLEIV 442
+ DI+S G ++ E+V
Sbjct: 201 GYKENVDIWSVGCIMGEMV 219
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 24/199 (12%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 30 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 86
Query: 310 LERK------ERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
+K + LV E + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 87 TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 140
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHG 423
IIHRDLK SNI++ S+ KI DFG+AR T V T Y APE ++
Sbjct: 141 ---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 424 RFSVKSDIFSFGVLVLEIV 442
+ DI+S G ++ E+V
Sbjct: 195 GYKENVDIWSVGCIMGEMV 213
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 24/199 (12%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGFC 309
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 30 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 86
Query: 310 LERK------ERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
+K + LV E + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 87 TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 140
Query: 364 RLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHG 423
IIHRDLK SNI++ S+ KI DFG+AR T V T Y APE ++
Sbjct: 141 ---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 424 RFSVKSDIFSFGVLVLEIV 442
+ DI+S G ++ E+V
Sbjct: 195 GYKENVDIWSVGCIMGEMV 213
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 30/209 (14%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 105 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 154
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 210
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSG 444
PE++ + R+ +S ++S G+L+ ++V G
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 30/209 (14%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 104 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 153
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 209
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSG 444
PE++ + R+ +S ++S G+L+ ++V G
Sbjct: 210 PEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 30/209 (14%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 119 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 168
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 224
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSG 444
PE++ + R+ +S ++S G+L+ ++V G
Sbjct: 225 PEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 30/209 (14%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 119 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 168
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 224
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSG 444
PE++ + R+ +S ++S G+L+ ++V G
Sbjct: 225 PEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 106/236 (44%), Gaps = 28/236 (11%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIE----FKNE 290
DF+ +RV +G+G + V L + I R+ K + E + E
Sbjct: 53 DFDLLRV----------IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTE 102
Query: 291 VLLLARLQHRNLVRLLGFCLERKERIL-VYEFVPNASLDHFIFDPINREHMTWEKRYKII 349
+ + + + L C + + R+ V E+V L +F + + E
Sbjct: 103 KHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYS 159
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVV 409
I+ L YLHE II+RDLK N+LLDSE + K++D+GM + E + T+
Sbjct: 160 AEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFC 214
Query: 410 GTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQK-----RSSFGTEEETEDLL 460
GT Y+APE + + D ++ GVL+ E+++G+ SS ++ TED L
Sbjct: 215 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 270
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 23/233 (9%)
Query: 246 FSDANKLGQGGFGAVYKGMLSNGETI--AVKRLSKNSKQGEIEFKNEVLLLARLQHRNLV 303
++ N +G+G +G V K + G I A K++ K + FK E+ ++ L H N++
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 304 RLLGFCLERKERILVYEFVPNASL-DHFIFDPINREHMTWEKRYKIIEGIARGLLYLHED 362
RL + + LV E L + + + RE +I++ + + Y H
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRE----SDAARIMKDVLSAVAYCH-- 140
Query: 363 SRLRIIHRDLKASNILL--DSEMNP-KISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEY 419
+L + HRDLK N L DS +P K+ DFG+A F+ + VGT Y++P+
Sbjct: 141 -KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---VGTPYYVSPQ- 195
Query: 420 VMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET-----EDLLTYAWRNW 467
V+ G + + D +S GV++ ++ G S T+ E E T+ ++W
Sbjct: 196 VLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDW 248
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 220 EDENVEETIAKSLQFDF-------ETIRVATDNFSDANKLGQGGFGAV-YKGMLSNGETI 271
E E+V+E +AK+ + DF D F LG G FG V + G
Sbjct: 12 EQESVKEFLAKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHY 70
Query: 272 AVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLD 328
A+K L K K +IE NE +L + LV+L + +V E+VP +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM- 129
Query: 329 HFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKI 387
F + R E + I YLH L +I+RDLK N+L+D + ++
Sbjct: 130 ---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 388 SDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 184 TDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 112/239 (46%), Gaps = 45/239 (18%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKN-------------------- 279
V + ++ +++G+G +G V N T A+K LSK
Sbjct: 10 VQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPA 69
Query: 280 -----SKQGEIE-FKNEVLLLARLQHRNLVRLLGFCLERKERIL--VYEFVPNASLDHF- 330
+G IE E+ +L +L H N+V+L+ + E L V+E V +
Sbjct: 70 PGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP 129
Query: 331 IFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDF 390
P++ + + + + +G+ YLH +IIHRD+K SN+L+ + + KI+DF
Sbjct: 130 TLKPLSEDQARF-----YFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADF 181
Query: 391 GMARLFE-MDQTHSDTNRVVGTFGYMAPEYVMHGR--FSVKS-DIFSFGVLVLEIVSGQ 445
G++ F+ D S+T VGT +MAPE + R FS K+ D+++ GV + V GQ
Sbjct: 182 GVSNEFKGSDALLSNT---VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 30/209 (14%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 77 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 126
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 182
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSG 444
PE++ + R+ +S ++S G+L+ ++V G
Sbjct: 183 PEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 220 EDENVEETIAKSLQFDF-------ETIRVATDNFSDANKLGQGGFGAV-YKGMLSNGETI 271
E E+V+E +AK+ + DF D F LG G FG V + G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 272 AVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLD 328
A+K L K K +IE NE +L + LV+L + +V E+VP +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM- 128
Query: 329 HFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKI 387
F + R E + I YLH L +I+RDLK N+L+D + ++
Sbjct: 129 ---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 388 SDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 183 TDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 220 EDENVEETIAKSLQFDF-------ETIRVATDNFSDANKLGQGGFGAV-YKGMLSNGETI 271
E E+V+E +AK+ + DF D F LG G FG V + G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 272 AVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLD 328
A+K L K K +IE NE +L + LV+L + +V E+VP +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM- 128
Query: 329 HFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKI 387
F + R E + I YLH L +I+RDLK N+L+D + ++
Sbjct: 129 ---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 388 SDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 183 TDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 220 EDENVEETIAKSLQFDF-------ETIRVATDNFSDANKLGQGGFGAV-YKGMLSNGETI 271
E E+V+E +AK+ + DF D F LG G FG V + G
Sbjct: 12 EQESVKEFLAKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHY 70
Query: 272 AVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLD 328
A+K L K K +IE NE +L + LV+L + +V E+VP +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM- 129
Query: 329 HFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKI 387
F + R E + I YLH L +I+RDLK N+L+D + ++
Sbjct: 130 ---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 388 SDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 184 TDFGFAK-----RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 30/209 (14%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 76 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 125
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 181
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSG 444
PE++ + R+ +S ++S G+L+ ++V G
Sbjct: 182 PEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 220 EDENVEETIAKSLQFDF-------ETIRVATDNFSDANKLGQGGFGAV-YKGMLSNGETI 271
E E+V+E +AK+ + DF D F LG G FG V + G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 272 AVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLD 328
A+K L K K +IE NE +L + LV+L + +V E+VP +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM- 128
Query: 329 HFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKI 387
F + R E + I YLH L +I+RDLK N+L+D + ++
Sbjct: 129 ---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 388 SDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 183 TDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 30/209 (14%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 124 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 173
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 174 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 229
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSG 444
PE++ + R+ +S ++S G+L+ ++V G
Sbjct: 230 PEWIRYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 106/240 (44%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF-------ETIRVATDNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF D F LG G FG V ML G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRV---MLVKHKETG 66
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+VP
Sbjct: 67 NHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGG 126
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 127 EM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 106/240 (44%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF-------ETIRVATDNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF D F LG G FG V ML G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRV---MLVKHKETG 66
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+VP
Sbjct: 67 NHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGG 126
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 127 EM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 125/299 (41%), Gaps = 36/299 (12%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCLE 311
+G+G FG VY G I + + ++++ FK EV+ + +H N+V +G C+
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100
Query: 312 RKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRD 371
++ +L + D + + K +I + I +G+ YLH I+H+D
Sbjct: 101 PPHLAIITSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKD 155
Query: 372 LKASNILLDSEMNPKISDFGMARLFEMDQT--HSDTNRVV-GTFGYMAPEYVMHGR---- 424
LK+ N+ D+ I+DFG+ + + Q D R+ G ++APE +
Sbjct: 156 LKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTE 214
Query: 425 -----FSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRNWNEGAAL--NLMD 477
FS SD+F+ G + E+ + + F T + E ++ W G + NL
Sbjct: 215 EDKLPFSKHSDVFALGTIWYELHA--REWPFKT-QPAEAII------WQMGTGMKPNLSQ 265
Query: 478 PTMRGGSTSEMMKCIHIGLLCVQENVSNRPGMASVVNMLNGDTVTLPAPSKPAFFMKCS 536
M G S+++ L C RP +++ML S P F K +
Sbjct: 266 IGM-GKEISDIL------LFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSHPGHFWKSA 317
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 22/198 (11%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGF- 308
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 41 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVF 97
Query: 309 ----CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
LE + + + + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 98 TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG- 151
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
IIHRDLK SNI++ S+ KI DFG+AR T V T Y APE ++
Sbjct: 152 --IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG 206
Query: 425 FSVKSDIFSFGVLVLEIV 442
+ D++S G ++ E+V
Sbjct: 207 YKENVDLWSVGCIMGEMV 224
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 106/240 (44%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF-------ETIRVATDNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF D F LG G FG V ML G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRV---MLVKHKETG 66
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+VP
Sbjct: 67 NHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGG 126
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 127 EM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 30/209 (14%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 75 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 124
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 125 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 180
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSG 444
PE++ + R+ +S ++S G+L+ ++V G
Sbjct: 181 PEWIRYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 30/209 (14%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 72 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 121
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 177
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSG 444
PE++ + R+ +S ++S G+L+ ++V G
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 220 EDENVEETIAKSLQFDF-------ETIRVATDNFSDANKLGQGGFGAV-YKGMLSNGETI 271
E E+V+E +AK+ + DF D F LG G FG V + G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 272 AVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLD 328
A+K L K K EIE NE +L + LV+L + +V E+ P +
Sbjct: 70 AMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM- 128
Query: 329 HFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKI 387
F + R E + I YLH L +I+RDLK N+++D + ++
Sbjct: 129 ---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQV 182
Query: 388 SDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+DFG+A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 183 TDFGLAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 30/209 (14%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 72 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 121
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 177
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSG 444
PE++ + R+ +S ++S G+L+ ++V G
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 30/202 (14%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGF- 308
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVF 92
Query: 309 ----CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
LE + + + + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG- 146
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARL----FEMDQTHSDTNRVVGTFGYMAPEYV 420
IIHRDLK SNI++ S+ KI DFG+AR F M+ V T Y APE +
Sbjct: 147 --IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPE-------VVTRYYRAPEVI 197
Query: 421 MHGRFSVKSDIFSFGVLVLEIV 442
+ + D++S G ++ E+V
Sbjct: 198 LGMGYKENVDLWSVGCIMGEMV 219
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 30/209 (14%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 99 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 148
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 149 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 204
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSG 444
PE++ + R+ +S ++S G+L+ ++V G
Sbjct: 205 PEWIRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF----ETIRVAT---DNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF E+ T D F LG G FG V ML G
Sbjct: 12 EQESVKEFLAKAKE-DFLKKWESPAQNTAHLDQFERIKTLGTGSFGRV---MLVKHKETG 67
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+VP
Sbjct: 68 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 127
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 128 EM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 180
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 181 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 22/198 (11%)
Query: 253 GQGGFGAVYKGMLSNGETIAVKRLSK---NSKQGEIEFKNEVLLLARLQHRNLVRLLGF- 308
QG A Y +L +A+K+LS+ N + ++ E++L+ + H+N++ LL
Sbjct: 30 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVF 86
Query: 309 ----CLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSR 364
LE + + + + +A+L I ++ E M++ ++ + G+ +LH
Sbjct: 87 TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG- 140
Query: 365 LRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGR 424
IIHRDLK SNI++ S+ KI DFG+AR T V T Y APE ++
Sbjct: 141 --IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG 195
Query: 425 FSVKSDIFSFGVLVLEIV 442
+ D++S G ++ E+V
Sbjct: 196 YKENVDLWSVGCIMGEMV 213
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF----ETIRVAT---DNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF E+ T D F LG G FG V ML G
Sbjct: 32 EQESVKEFLAKAKE-DFLKKWESPAQNTAHLDQFERIKTLGTGSFGRV---MLVKHKETG 87
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+VP
Sbjct: 88 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 147
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 148 EM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 200
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 201 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 30/209 (14%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 303 VRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY---- 358
+RLL + ER + ++ P D +FD I +R + E +AR +
Sbjct: 72 IRLLDW-FERPDSFVLILERPEPVQD--LFDFIT-------ERGALQEELARSFFWQVLE 121
Query: 359 -LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 122 AVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSP 177
Query: 417 PEYVMHGRFSVKS-DIFSFGVLVLEIVSG 444
PE++ + R+ +S ++S G+L+ ++V G
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF----ETIRVAT---DNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF E+ T D F LG G FG V ML G
Sbjct: 12 EQESVKEFLAKAKE-DFLKKWESPAQNTAHLDQFERIKTLGTGSFGRV---MLVKHKETG 67
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+VP
Sbjct: 68 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 127
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 128 EM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 180
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 181 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF----ETIRVAT---DNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF E+ T D F LG G FG V ML G
Sbjct: 12 EQESVKEFLAKAKE-DFLKKWESPAQNTAHLDQFERIKTLGTGSFGRV---MLVKHKETG 67
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+VP
Sbjct: 68 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 127
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 128 EM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 180
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 181 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 102/230 (44%), Gaps = 47/230 (20%)
Query: 238 TIRVATDNFSDANKLGQGGFGA-VYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLAR 296
+ V +F + LG G G VY+GM N + +AVKR+ F + + L R
Sbjct: 18 VVIVGKISFCPKDVLGHGAEGTIVYRGMFDNRD-VAVKRILPEC----FSFADREVQLLR 72
Query: 297 L--QHRNLVRLLGFCLERKERILVY-----------EFVPNASLDHFIFDPINREHMTWE 343
+H N++R FC E K+R Y E+V H +PI
Sbjct: 73 ESDEHPNVIRY--FCTE-KDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPIT------- 122
Query: 344 KRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLD-----SEMNPKISDFGMARLFEM 398
+++ GL +LH L I+HRDLK NIL+ ++ ISDFG+ + +
Sbjct: 123 ----LLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175
Query: 399 DQTHSDTNR--VVGTFGYMAPEYVMHG---RFSVKSDIFSFGVLVLEIVS 443
+ HS + R V GT G++APE + + DIFS G + ++S
Sbjct: 176 GR-HSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 20/225 (8%)
Query: 241 VATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKNSKQGEIEFKN---EVLLLAR 296
V D+F +G+G FG V ++ + + A+K ++K E +N E+ ++
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 297 LQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGL 356
L+H LV L + ++ +V + + L + + + H E I + L
Sbjct: 72 LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNV---HFKEETVKLFICELVMAL 128
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
YL RIIHRD+K NILLD + I+DF +A + + + + GT YMA
Sbjct: 129 DYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE---TQITTMAGTKPYMA 182
Query: 417 PEYVMHGR---FSVKSDIFSFGVLVLEIVSGQK----RSSFGTEE 454
PE + +S D +S GV E++ G++ RSS ++E
Sbjct: 183 PEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKE 227
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 104/237 (43%), Gaps = 25/237 (10%)
Query: 220 EDENVEETIAKSLQFDF-------ETIRVATDNFSDANKLGQGGFGAV-YKGMLSNGETI 271
E E+V+E +AK+ + DF D F LG G FG V + G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 272 AVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLD 328
A+K L K K +IE NE +L + LV+L + +V E+ P +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM- 128
Query: 329 HFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKI 387
F + R E + I YLH L +I+RDLK N+++D + K+
Sbjct: 129 ---FSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 182
Query: 388 SDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 183 TDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 220 EDENVEETIAKSLQFDF-------ETIRVATDNFSDANKLGQGGFGAV-YKGMLSNGETI 271
E E+V+E +AK+ + DF D F +G G FG V + G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHY 69
Query: 272 AVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLD 328
A+K L K K +IE NE +L + LV+L + +V E++P +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM- 128
Query: 329 HFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKI 387
F + R E + I YLH L +I+RDLK N+L+D + K+
Sbjct: 129 ---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKV 182
Query: 388 SDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 183 ADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 21/208 (10%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQ-HRNLVRLLGFC 309
LG+G + V + L NG+ AVK + K + EV L + Q ++N++ L+ F
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFF 80
Query: 310 LERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIH 369
+ LV+E + S+ I ++H + +++ +A L +LH I H
Sbjct: 81 EDDTRFYLVFEKLQGGSILAHI---QKQKHFNEREASRVVRDVAAALDFLHTKG---IAH 134
Query: 370 RDLKASNILLDS--EMNP-KISDFGMARLFEMDQ-----THSDTNRVVGTFGYMAPEYV- 420
RDLK NIL +S +++P KI DF + +++ T + G+ YMAPE V
Sbjct: 135 RDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVE 194
Query: 421 ----MHGRFSVKSDIFSFGVLVLEIVSG 444
+ + D++S GV++ ++SG
Sbjct: 195 VFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 220 EDENVEETIAKSLQFDF-------ETIRVATDNFSDANKLGQGGFGAV-YKGMLSNGETI 271
E E+V+E +AK+ + DF D F +G G FG V + G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHY 69
Query: 272 AVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLD 328
A+K L K K +IE NE +L + LV+L + +V E++P +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM- 128
Query: 329 HFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKI 387
F + R E + I YLH L +I+RDLK N+L+D + K+
Sbjct: 129 ---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKV 182
Query: 388 SDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 183 ADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 104/237 (43%), Gaps = 25/237 (10%)
Query: 220 EDENVEETIAKSLQFDF-------ETIRVATDNFSDANKLGQGGFGAV-YKGMLSNGETI 271
E E+V+E +AK+ + DF D F LG G FG V + G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 272 AVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLD 328
A+K L K K +IE NE +L + LV+L + +V E+ P +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM- 128
Query: 329 HFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKI 387
F + R E + I YLH L +I+RDLK N+++D + K+
Sbjct: 129 ---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 182
Query: 388 SDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 183 TDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 28/236 (11%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIE----FKNE 290
DF+ +RV +G+G + V L + I ++ K + E + E
Sbjct: 10 DFDLLRV----------IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTE 59
Query: 291 VLLLARLQHRNLVRLLGFCLERKERIL-VYEFVPNASLDHFIFDPINREHMTWEKRYKII 349
+ + + + L C + + R+ V E+V L +F + + E
Sbjct: 60 KHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYS 116
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVV 409
I+ L YLHE II+RDLK N+LLDSE + K++D+GM + E + T+
Sbjct: 117 AEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFC 171
Query: 410 GTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQK-----RSSFGTEEETEDLL 460
GT Y+APE + + D ++ GVL+ E+++G+ SS ++ TED L
Sbjct: 172 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 227
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 17/206 (8%)
Query: 244 DNFSDANKLGQGGFGAV-YKGMLSNGETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQH 299
D F LG G FG V + G A+K L K K +IE NE +L +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 300 RNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEG-IARGLLY 358
LV+L + +V E+VP + F + R E + I Y
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 142
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPE 418
LH L +I+RDLK N+L+D + +++DFG A+ + T + GT Y+APE
Sbjct: 143 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPE 194
Query: 419 YVMHGRFSVKSDIFSFGVLVLEIVSG 444
++ ++ D ++ GVL+ E+ +G
Sbjct: 195 IILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 23/209 (11%)
Query: 244 DNFSDANKLGQGGFGAVYKGML----SNGETIAVKRLSKNS--KQGEIEFK-NEVLLLAR 296
D F LG G FG V ML G A+K L K K +IE NE +L
Sbjct: 34 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 297 LQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEG-IARG 355
+ LV+L + +V E+VP + F + R E + I
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQIVLT 146
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYM 415
YLH L +I+RDLK N+L+D + +++DFG A+ + T + GT Y+
Sbjct: 147 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYL 198
Query: 416 APEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 108/221 (48%), Gaps = 20/221 (9%)
Query: 236 FETIRVATDNFSDANKLGQGGFGAVYKGM---------LSNGETIAVKRLSKNSKQGEIE 286
F IR F+++ LGQG F ++KG+ L E + +K L K +
Sbjct: 2 FHKIRNEDLIFNES--LGQGTFTKIFKGVRREVGDYGQLHETEVL-LKVLDKAHRNYSES 58
Query: 287 FKNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRY 346
F ++++L H++LV G C+ E ILV EFV SLD ++ N ++ W +
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KL 116
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFE--MDQTHSD 404
++ + +A + +L E++ +IH ++ A NILL E + K + +L + + T
Sbjct: 117 EVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP 173
Query: 405 TNRVVGTFGYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSG 444
+ + ++ PE + + + ++ +D +SFG + EI SG
Sbjct: 174 KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 28/236 (11%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIE----FKNE 290
DF+ +RV +G+G + V L + I ++ K + E + E
Sbjct: 21 DFDLLRV----------IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTE 70
Query: 291 VLLLARLQHRNLVRLLGFCLERKERIL-VYEFVPNASLDHFIFDPINREHMTWEKRYKII 349
+ + + + L C + + R+ V E+V L +F + + E
Sbjct: 71 KHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYS 127
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVV 409
I+ L YLHE II+RDLK N+LLDSE + K++D+GM + E + T+
Sbjct: 128 AEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFC 182
Query: 410 GTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQK-----RSSFGTEEETEDLL 460
GT Y+APE + + D ++ GVL+ E+++G+ SS ++ TED L
Sbjct: 183 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF----ETIRVAT---DNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF ET T D F LG G FG V ML +G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESG 66
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+V
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 127 EM----FSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 108/240 (45%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF----ETIRVAT---DNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF E+ T D F LG G FG V ML G
Sbjct: 12 EQESVKEFLAKAKE-DFLKKWESPAQNTAHLDQFERIKTLGTGSFGRV---MLVKHKETG 67
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+ P
Sbjct: 68 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGG 127
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+++D +
Sbjct: 128 EM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGY 180
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
K++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 181 IKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF----ETIRVAT---DNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF ET T D F LG G FG V ML +G
Sbjct: 32 EQESVKEFLAKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESG 87
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+V
Sbjct: 88 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 147
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 148 EM----FSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 200
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 201 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 32/210 (15%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKN--SKQGEI----EFKNEVLLLARLQ--HRNL 302
LG GGFG+VY G+ +S+ +A+K + K+ S GE+ EV+LL ++ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 303 VRLLGFCLERKERILVYEFV-PNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY--- 358
+RLL + +L+ E + P L FI +R + E +AR +
Sbjct: 76 IRLLDWFERPDSFVLILERMEPVQDLFDFI-----------TERGALQEELARSFFWQVL 124
Query: 359 --LHEDSRLRIIHRDLKASNILLD-SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYM 415
+ ++HRD+K NIL+D + K+ DFG L + D ++D + GT Y
Sbjct: 125 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYS 180
Query: 416 APEYVMHGRFSVKS-DIFSFGVLVLEIVSG 444
PE++ + R+ +S ++S G+L+ ++V G
Sbjct: 181 PPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 28/236 (11%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIE----FKNE 290
DF+ +RV +G+G + V L + I ++ K + E + E
Sbjct: 6 DFDLLRV----------IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTE 55
Query: 291 VLLLARLQHRNLVRLLGFCLERKERIL-VYEFVPNASLDHFIFDPINREHMTWEKRYKII 349
+ + + + L C + + R+ V E+V L +F + + E
Sbjct: 56 KHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYS 112
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVV 409
I+ L YLHE II+RDLK N+LLDSE + K++D+GM + E + T+
Sbjct: 113 AEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFC 167
Query: 410 GTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQK-----RSSFGTEEETEDLL 460
GT Y+APE + + D ++ GVL+ E+++G+ SS ++ TED L
Sbjct: 168 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 223
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 23/209 (11%)
Query: 244 DNFSDANKLGQGGFGAVYKGML----SNGETIAVKRLSKNS--KQGEIEFK-NEVLLLAR 296
D F LG G FG V ML G A+K L K K +IE NE +L
Sbjct: 34 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 297 LQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEG-IARG 355
+ LV+L + +V E+VP + F + R E + I
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 146
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYM 415
YLH L +I+RDLK N+L+D + +++DFG A+ + T + GT Y+
Sbjct: 147 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYL 198
Query: 416 APEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF----ETIRVAT---DNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF ET T D F LG G FG V ML +G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESG 66
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+V
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 127 EM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 20/221 (9%)
Query: 236 FETIRVATDNFSDANKLGQGGFGAVYKGM---------LSNGETIAVKRLSKNSKQGEIE 286
F IR F+++ LGQG F ++KG+ L E + +K L K +
Sbjct: 2 FHKIRNEDLIFNES--LGQGTFTKIFKGVRREVGDYGQLHETEVL-LKVLDKAHRNYSES 58
Query: 287 FKNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRY 346
F ++++L H++LV G C E ILV EFV SLD ++ N ++ W +
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KL 116
Query: 347 KIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFE--MDQTHSD 404
++ + +A + +L E++ +IH ++ A NILL E + K + +L + + T
Sbjct: 117 EVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP 173
Query: 405 TNRVVGTFGYMAPEYVMHGR-FSVKSDIFSFGVLVLEIVSG 444
+ + ++ PE + + + ++ +D +SFG + EI SG
Sbjct: 174 KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF----ETIRVAT---DNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF ET T D F LG G FG V ML +G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESG 66
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+V
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 127 EM----FSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF----ETIRVAT---DNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF ET T D F LG G FG V ML +G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESG 66
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+V
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 127 EM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 24/207 (11%)
Query: 252 LGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN------EVLLLARLQ----HR 300
LG+GGFG V+ G L++ +A+K + +N G + EV LL ++ H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 301 NLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYL 359
++RLL + E +E ++ P + D +FD I + E + G + + +
Sbjct: 99 GVIRLLDW-FETQEGFMLVLERPLPAQD--LFDYITEKGPLGEGPSRCFFGQVVAAIQHC 155
Query: 360 HEDSRLRIIHRDLKASNILLDSEMN-PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPE 418
H ++HRD+K NIL+D K+ DFG L D+ ++D + GT Y PE
Sbjct: 156 HSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALLH-DEPYTDFD---GTRVYSPPE 208
Query: 419 YV-MHGRFSVKSDIFSFGVLVLEIVSG 444
++ H ++ + ++S G+L+ ++V G
Sbjct: 209 WISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF----ETIRVAT---DNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF ET T D F LG G FG V ML +G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESG 66
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+V
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 127 EM----FSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF----ETIRVAT---DNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF ET T D F LG G FG V ML +G
Sbjct: 32 EQESVKEFLAKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESG 87
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+V
Sbjct: 88 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 147
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 148 EM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 200
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 201 IQVTDFGFAK-----RVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF----ETIRVAT---DNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF ET T D F LG G FG V ML +G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESG 66
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+V
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 127 EM----FSHLRRIGRFAEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF----ETIRVAT---DNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF ET T D F LG G FG V ML +G
Sbjct: 6 EQESVKEFLAKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESG 61
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+V
Sbjct: 62 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 121
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 122 EM----FSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 174
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 175 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF----ETIRVAT---DNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF ET T D F LG G FG V ML +G
Sbjct: 12 EQESVKEFLAKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESG 67
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+V
Sbjct: 68 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 127
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 128 EM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 180
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 181 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF----ETIRVAT---DNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF ET T D F LG G FG V ML +G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESG 66
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+V
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 127 EM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF----ETIRVAT---DNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF ET T D F LG G FG V ML +G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESG 66
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+V
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 127 EM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF----ETIRVAT---DNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF ET T D F LG G FG V ML +G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESG 66
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+V
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 127 EM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 20/227 (8%)
Query: 249 ANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSK----QGEIEFKNEVLLLARLQHRNLV 303
+ +LG+G F V + + S G+ A K L K + + EI + VL LA+ R ++
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPR-VI 92
Query: 304 RLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDS 363
L E IL+ E+ + P E ++ ++I+ I G+ YLH+++
Sbjct: 93 NLHEVYENTSEIILILEYAAGGEIFSLCL-PELAEMVSENDVIRLIKQILEGVYYLHQNN 151
Query: 364 RLRIIHRDLKASNILLDSEM---NPKISDFGMARLFEMDQTHS-DTNRVVGTFGYMAPEY 419
I+H DLK NILL S + KI DFGM+R H+ + ++GT Y+APE
Sbjct: 152 ---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI----GHACELREIMGTPEYLAPEI 204
Query: 420 VMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYAWRN 466
+ + + +D+++ G++ +++ S F E+ E L + N
Sbjct: 205 LNYDPITTATDMWNIGIIAYMLLT--HTSPFVGEDNQETYLNISQVN 249
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 103/237 (43%), Gaps = 25/237 (10%)
Query: 220 EDENVEETIAKSLQFDF-------ETIRVATDNFSDANKLGQGGFGAV-YKGMLSNGETI 271
E E+V+E +AK+ + DF D F LG G FG V + G
Sbjct: 12 EQESVKEFLAKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHY 70
Query: 272 AVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLD 328
A+K L K K +IE NE +L + L +L + +V E+ P +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM- 129
Query: 329 HFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKI 387
F + R E + I YLH L +I+RDLK N+++D + K+
Sbjct: 130 ---FSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 183
Query: 388 SDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 184 TDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF----ETIRVAT---DNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF ET T D F LG G FG V ML +G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESG 66
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+V
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 127 EM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 252 LGQGGFGAVYKG-MLSNGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQHRNLVRLLGFC 309
LGQG V++G G+ A+K + S ++ + E +L +L H+N+V+L F
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL--FA 74
Query: 310 LER----KERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRL 365
+E + ++L+ EF P SL + +P N + + ++ + G+ +L E+
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-- 132
Query: 366 RIIHRDLKASNILL----DSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYV- 420
I+HR++K NI+ D + K++DFG AR E D+ + GT Y+ P+
Sbjct: 133 -IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV---XLYGTEEYLHPDMYE 188
Query: 421 -------MHGRFSVKSDIFSFGVLVLEIVSG 444
++ D++S GV +G
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF----ETIRVAT---DNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF ET T D F LG G FG V ML +G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESG 66
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+V
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 127 EM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 25/237 (10%)
Query: 220 EDENVEETIAKSLQFDF-------ETIRVATDNFSDANKLGQGGFGAV-YKGMLSNGETI 271
E E+V+E +AK+ + DF D F LG G FG V + G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 272 AVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLD 328
A+K L K K +IE NE +L + LV+L + +V E+ P +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM- 128
Query: 329 HFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKI 387
F + R E + I YLH L +I+RDLK N+++D + ++
Sbjct: 129 ---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQV 182
Query: 388 SDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 183 TDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 103/237 (43%), Gaps = 25/237 (10%)
Query: 220 EDENVEETIAKSLQFDF-------ETIRVATDNFSDANKLGQGGFGAV-YKGMLSNGETI 271
E E+V+E +AK+ + DF D F LG G FG V + G
Sbjct: 12 EQESVKEFLAKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHY 70
Query: 272 AVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLD 328
A+K L K K +IE NE +L + L +L + +V E+ P +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM- 129
Query: 329 HFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKI 387
F + R E + I YLH L +I+RDLK N+++D + K+
Sbjct: 130 ---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 183
Query: 388 SDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 184 TDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 103/237 (43%), Gaps = 25/237 (10%)
Query: 220 EDENVEETIAKSLQFDF-------ETIRVATDNFSDANKLGQGGFGAV-YKGMLSNGETI 271
E E+V+E +AK+ + DF D F LG G FG V + G
Sbjct: 12 EQESVKEFLAKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHY 70
Query: 272 AVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLD 328
A+K L K K +IE NE +L + L +L + +V E+ P +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM- 129
Query: 329 HFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKI 387
F + R E + I YLH L +I+RDLK N+++D + K+
Sbjct: 130 ---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 183
Query: 388 SDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 184 TDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 243 TDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQ-GEIEFKNEVLLLARLQHR 300
+ +F + LG+G +G V GE +A+K++ K + E+ +L +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 301 NLVRLLGFCLERKERILVYE--FVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
N++ + F ++R + + ++ + + I+ + ++ + I R +
Sbjct: 70 NIITI--FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN----------RV 408
LH + +IHRDLK SN+L++S + K+ DFG+AR+ +D++ +D +
Sbjct: 128 LHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARI--IDESAADNSEPTGQQSGMVEF 182
Query: 409 VGTFGYMAPEYVM-HGRFSVKSDIFSFGVLVLEI 441
V T Y APE ++ ++S D++S G ++ E+
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 252 LGQGGFGAVYKG-MLSNGETIAVKRLSKNSKQGEIEFK-NEVLLLARLQHRNLVRLLGFC 309
LGQG V++G G+ A+K + S ++ + E +L +L H+N+V+L F
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL--FA 74
Query: 310 LER----KERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRL 365
+E + ++L+ EF P SL + +P N + + ++ + G+ +L E+
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-- 132
Query: 366 RIIHRDLKASNILL----DSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYV- 420
I+HR++K NI+ D + K++DFG AR E D+ + GT Y+ P+
Sbjct: 133 -IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS---LYGTEEYLHPDMYE 188
Query: 421 -------MHGRFSVKSDIFSFGVLVLEIVSG 444
++ D++S GV +G
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 243 TDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQ-GEIEFKNEVLLLARLQHR 300
+ +F + LG+G +G V GE +A+K++ K + E+ +L +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 301 NLVRLLGFCLERKERILVYE--FVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
N++ + F ++R + + ++ + + I+ + ++ + I R +
Sbjct: 70 NIITI--FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN----------RV 408
LH + +IHRDLK SN+L++S + K+ DFG+AR+ +D++ +D +
Sbjct: 128 LHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARI--IDESAADNSEPTGQQSGMTEX 182
Query: 409 VGTFGYMAPEYVM-HGRFSVKSDIFSFGVLVLEI 441
V T Y APE ++ ++S D++S G ++ E+
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 25/210 (11%)
Query: 272 AVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFI 331
AVK + K+ + E + +LL QH N++ L + K LV E + L
Sbjct: 56 AVKVIDKSKRDPSEEIE---ILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGEL---- 108
Query: 332 FDPINREHMTWEKRYK-IIEGIARGLLYLHEDSRLRIIHRDLKASNIL-LDSEMNP---K 386
D I R+ E+ ++ I + + YLH ++HRDLK SNIL +D NP +
Sbjct: 109 LDKILRQKFFSEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLR 165
Query: 387 ISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQK 446
I DFG A+ + T F +APE + + DI+S G+L+ +++G
Sbjct: 166 ICDFGFAKQLRAENGLLMTPCYTANF--VAPEVLKRQGYDEGCDIWSLGILLYTMLAGYT 223
Query: 447 RSSFGTEEETEDLL--------TYAWRNWN 468
+ G + E++L T + NWN
Sbjct: 224 PFANGPSDTPEEILTRIGSGKFTLSGGNWN 253
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 25/210 (11%)
Query: 272 AVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFI 331
AVK + K+ + E + +LL QH N++ L + K LV E + L
Sbjct: 56 AVKVIDKSKRDPSEEIE---ILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGEL---- 108
Query: 332 FDPINREHMTWEKRYK-IIEGIARGLLYLHEDSRLRIIHRDLKASNIL-LDSEMNP---K 386
D I R+ E+ ++ I + + YLH ++HRDLK SNIL +D NP +
Sbjct: 109 LDKILRQKFFSEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLR 165
Query: 387 ISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQK 446
I DFG A+ + T F +APE + + DI+S G+L+ +++G
Sbjct: 166 ICDFGFAKQLRAENGLLMTPCYTANF--VAPEVLKRQGYDEGCDIWSLGILLYTMLAGYT 223
Query: 447 RSSFGTEEETEDLL--------TYAWRNWN 468
+ G + E++L T + NWN
Sbjct: 224 PFANGPSDTPEEILTRIGSGKFTLSGGNWN 253
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 243 TDNFSDANKLGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQ-GEIEFKNEVLLLARLQHR 300
+ +F + LG+G +G V GE +A+K++ K + E+ +L +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 301 NLVRLLGFCLERKERILVYE--FVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLY 358
N++ + F ++R + + ++ + + I+ + ++ + I R +
Sbjct: 70 NIITI--FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 359 LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN----------RV 408
LH + +IHRDLK SN+L++S + K+ DFG+AR+ +D++ +D +
Sbjct: 128 LHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARI--IDESAADNSEPTGQQSGMTEY 182
Query: 409 VGTFGYMAPEYVM-HGRFSVKSDIFSFGVLVLEI 441
V T Y APE ++ ++S D++S G ++ E+
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 114/270 (42%), Gaps = 60/270 (22%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARL-----QHRNLVRLL 306
LG G G V G +AVKR+ I+F + L+ +L H N++R
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRML-------IDFCDIALMEIKLLTESDDHPNVIRY- 92
Query: 307 GFCLERKERILVYEF-VPNASLDHFIFDP-INREHMTWEKRY---KIIEGIARGLLYLHE 361
+C E +R L + N +L + ++ E++ +K Y ++ IA G+ +LH
Sbjct: 93 -YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 362 DSRLRIIHRDLKASNILLDSE-------------MNPKISDFGMARLFEMDQT--HSDTN 406
L+IIHRDLK NIL+ + + ISDFG+ + + Q + N
Sbjct: 152 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 407 RVVGTFGYMAPEYVMHG---RFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYA 463
GT G+ APE + R + DIFS G + I+S K FG + E +
Sbjct: 209 NPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH-PFGDKYSRESNI--- 264
Query: 464 WRNWNEGAALNLMDPTMRGGSTSEMMKCIH 493
+RG + + MKC+H
Sbjct: 265 ----------------IRGIFSLDEMKCLH 278
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 114/270 (42%), Gaps = 60/270 (22%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARL-----QHRNLVRLL 306
LG G G V G +AVKR+ I+F + L+ +L H N++R
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRML-------IDFCDIALMEIKLLTESDDHPNVIRY- 92
Query: 307 GFCLERKERILVYEF-VPNASLDHFIFDP-INREHMTWEKRY---KIIEGIARGLLYLHE 361
+C E +R L + N +L + ++ E++ +K Y ++ IA G+ +LH
Sbjct: 93 -YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 362 DSRLRIIHRDLKASNILLDSE-------------MNPKISDFGMARLFEMDQT--HSDTN 406
L+IIHRDLK NIL+ + + ISDFG+ + + Q + N
Sbjct: 152 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 407 RVVGTFGYMAPEYVMHG---RFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDLLTYA 463
GT G+ APE + R + DIFS G + I+S K FG + E +
Sbjct: 209 NPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH-PFGDKYSRESNI--- 264
Query: 464 WRNWNEGAALNLMDPTMRGGSTSEMMKCIH 493
+RG + + MKC+H
Sbjct: 265 ----------------IRGIFSLDEMKCLH 278
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 109/240 (45%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF----ETIRVAT---DNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF ET T D F LG G FG V ML +G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESG 66
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+V
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 127 EM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ ++ +G
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 115/274 (41%), Gaps = 64/274 (23%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARL-----QHRNLVRLL 306
LG G G V G +AVKR+ I+F + L+ +L H N++R
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRML-------IDFCDIALMEIKLLTESDDHPNVIRY- 74
Query: 307 GFCLERKERILVYEF-VPNASLDHFIFDP-INREHMTWEKRY---KIIEGIARGLLYLHE 361
+C E +R L + N +L + ++ E++ +K Y ++ IA G+ +LH
Sbjct: 75 -YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133
Query: 362 DSRLRIIHRDLKASNILLDSE-------------MNPKISDFGMARLFEMDQT--HSDTN 406
L+IIHRDLK NIL+ + + ISDFG+ + + Q+ ++ N
Sbjct: 134 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLN 190
Query: 407 RVVGTFGYMAPEYVMHG-------RFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDL 459
GT G+ APE + R + DIFS G + I+S K FG + E
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH-PFGDKYSRE-- 247
Query: 460 LTYAWRNWNEGAALNLMDPTMRGGSTSEMMKCIH 493
+RG + + MKC+H
Sbjct: 248 -----------------SNIIRGIFSLDEMKCLH 264
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 104/237 (43%), Gaps = 25/237 (10%)
Query: 220 EDENVEETIAKSLQFDF-------ETIRVATDNFSDANKLGQGGFGAV-YKGMLSNGETI 271
E E+V+E +AK+ + DF D F LG G FG V + G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 272 AVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLD 328
A+K L K K +IE NE +L + LV+L + +V E+V +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM- 128
Query: 329 HFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKI 387
F + R E + I YLH L +I+RDLK N+L+D + ++
Sbjct: 129 ---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 388 SDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 183 TDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 107/233 (45%), Gaps = 44/233 (18%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLSKNSKQGEIEFKN---EVLLLARLQH 299
DN+ + +G+G +G VY N E +A+K++++ + I+ K E+ +L RL+
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNR-MFEDLIDCKRILREITILNRLKS 84
Query: 300 RNLVRLLGFC-----LERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIAR 354
++RL L+ E +V E + ++ L PI +T E I+ +
Sbjct: 85 DYIIRLYDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTPI---FLTEEHIKTILYNLLL 140
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRV------ 408
G ++HE IIHRDLK +N LL+ + + K+ DFG+AR + DTN V
Sbjct: 141 GENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTI---NSEKDTNIVNDLEEN 194
Query: 409 -----------------VGTFGYMAPEYVMHGRFSVKS-DIFSFGVLVLEIVS 443
V T Y APE ++ KS DI+S G + E+++
Sbjct: 195 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 109/240 (45%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF----ETIRVAT---DNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF ET T D F LG G FG V ML +G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESG 66
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+V
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+++D +
Sbjct: 127 EM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLIIDQQGY 179
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 107/240 (44%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF----ETIRVAT---DNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF E+ T D F LG G FG V ML G
Sbjct: 12 EQESVKEFLAKAKE-DFLKKWESPAQNTAHLDQFERIRTLGTGSFGRV---MLVKHKETG 67
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE + + LV+L + +V E+ P
Sbjct: 68 NHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGG 127
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 128 EM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 180
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
K++DFG A+ + T + GT Y+APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 181 IKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 252 LGQGGFGAVYKGMLS-NGETIAVKRLSKNSKQGEIEFKNEVLLLARLQ-HRNLVRLLGFC 309
LG+G F K + + + AVK +SK + E + E+ L + H N+V+L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISK---RMEANTQKEITALKLCEGHPNIVKLHEVF 75
Query: 310 LERKERILVYEFVPNASLDHFIFDPINRE-HMTWEKRYKIIEGIARGLLYLHEDSRLRII 368
++ LV E + L F+ I ++ H + + I+ + + ++H+ + ++
Sbjct: 76 HDQLHTFLVMELLNGGEL----FERIKKKKHFSETEASYIMRKLVSAVSHMHD---VGVV 128
Query: 369 HRDLKASNILLDSE---MNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRF 425
HRDLK N+L E + KI DFG ARL D T T Y APE + +
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP--CFTLHYAAPELLNQNGY 186
Query: 426 SVKSDIFSFGVLVLEIVSGQ 445
D++S GV++ ++SGQ
Sbjct: 187 DESCDLWSLGVILYTMLSGQ 206
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVK-----RLSKNSKQGEIEFKNEVLLLARL 297
D + +G+G F V + + G+ AVK + + + + K E + L
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLL 357
+H ++V LL +V+EF+ A L F+ + R + + R +L
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 358 ----YLHEDSRLRIIHRDLKASNILLDSEMNP---KISDFGMARLFEMDQTHSDTNRVVG 410
Y H+++ IIHRD+K N+LL S+ N K+ DFG+A ++ ++ VG
Sbjct: 141 EALRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGGRVG 195
Query: 411 TFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
T +MAPE V + D++ GV++ ++SG
Sbjct: 196 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 13/211 (6%)
Query: 240 RVATDNFSDANKLGQGGFGAV-YKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQ 298
RV + F LG+G FG V + G A+K L K + E + + LQ
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 299 HRN--LVRLLGFCLERKERI-LVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEG-IAR 354
+ + L + + +R+ V E+ L F ++RE + E R + I
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVMEYANGGEL----FFHLSRERVFSEDRARFYGAEIVS 121
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGY 414
L YLH S +++RDLK N++LD + + KI+DFG+ + E + + GT Y
Sbjct: 122 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEY 177
Query: 415 MAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
+APE + + D + GV++ E++ G+
Sbjct: 178 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 108/240 (45%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF----ETIRVAT---DNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF ET T D F LG G FG V ML +G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESG 66
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+V
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 127 EM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT Y+AP ++ ++ D ++ GVL+ E+ +G
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 13/211 (6%)
Query: 240 RVATDNFSDANKLGQGGFGAV-YKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQ 298
RV + F LG+G FG V + G A+K L K + E + + LQ
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 299 HRN--LVRLLGFCLERKERI-LVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEG-IAR 354
+ + L + + +R+ V E+ L F ++RE + E R + I
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVMEYANGGEL----FFHLSRERVFSEDRARFYGAEIVS 119
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGY 414
L YLH S +++RDLK N++LD + + KI+DFG+ + E + + GT Y
Sbjct: 120 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEY 175
Query: 415 MAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
+APE + + D + GV++ E++ G+
Sbjct: 176 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 13/211 (6%)
Query: 240 RVATDNFSDANKLGQGGFGAV-YKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQ 298
RV + F LG+G FG V + G A+K L K + E + + LQ
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 64
Query: 299 HRN--LVRLLGFCLERKERI-LVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEG-IAR 354
+ + L + + +R+ V E+ L F ++RE + E R + I
Sbjct: 65 NSRHPFLTALKYSFQTHDRLCFVMEYANGGEL----FFHLSRERVFSEDRARFYGAEIVS 120
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGY 414
L YLH S +++RDLK N++LD + + KI+DFG+ + E + + GT Y
Sbjct: 121 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEY 176
Query: 415 MAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
+APE + + D + GV++ E++ G+
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 36/255 (14%)
Query: 215 GKLKLEDENVEETIA-KSLQF----DFETIRVATDNFSDANKLGQGGFGAVYKGMLS-NG 268
G +K E + ++A K+L F+ D + +G G +G V G
Sbjct: 21 GPVKAEPAHTAASVAAKNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTG 80
Query: 269 ETIAVKRLSK------NSKQGEIEFKNEVLLLARLQHRNLVRLLGFCL------ERKERI 316
+ +A+K++ N+K+ E K +L +H N++ + E K
Sbjct: 81 QQVAIKKIPNAFDVVTNAKRTLRELK----ILKHFKHDNIIAIKDILRPTVPYGEFKSVY 136
Query: 317 LVYEFVPNASLDHFIF--DPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKA 374
+V + + + L I P+ EH+ RY + + + RGL Y+H ++IHRDLK
Sbjct: 137 VVLDLM-ESDLHQIIHSSQPLTLEHV----RYFLYQ-LLRGLKYMHS---AQVIHRDLKP 187
Query: 375 SNILLDSEMNPKISDFGMAR-LFEMDQTHSD-TNRVVGTFGYMAPEYVMH-GRFSVKSDI 431
SN+L++ KI DFGMAR L H V T Y APE ++ ++ D+
Sbjct: 188 SNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDL 247
Query: 432 FSFGVLVLEIVSGQK 446
+S G + E+++ ++
Sbjct: 248 WSVGCIFGEMLARRQ 262
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 23/222 (10%)
Query: 230 KSLQFDF-ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEF 287
K + +++ E + AT +LG+G FG V++ G AVK++ E+
Sbjct: 63 KPVDYEYREEVHWATHQL----RLGRGSFGEVHRMEDKQTGFQCAVKKVRL-----EVFR 113
Query: 288 KNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYK 347
E++ A L +V L G E + E + SL + + E R
Sbjct: 114 AEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV----KEQGCLPEDRAL 169
Query: 348 IIEGIA-RGLLYLHEDSRLRIIHRDLKASNILLDSE-MNPKISDFGMARLFEMDQTHSDT 405
G A GL YLH SR RI+H D+KA N+LL S+ + + DFG A + D D
Sbjct: 170 YYLGQALEGLEYLH--SR-RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDL 226
Query: 406 ---NRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+ + GT +MAPE V+ K D++S ++L +++G
Sbjct: 227 LTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 23/209 (11%)
Query: 244 DNFSDANKLGQGGFGAVYKGML----SNGETIAVKRLSKNS--KQGEIEFK-NEVLLLAR 296
D F LG G FG V ML +G A+K L K K +IE NE +L
Sbjct: 28 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 84
Query: 297 LQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEG-IARG 355
+ LV+L + +V E+V + F + R E + I
Sbjct: 85 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 140
Query: 356 LLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYM 415
YLH L +I+RDLK N+L+D + +++DFG A+ + T + GT Y+
Sbjct: 141 FEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYL 192
Query: 416 APEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 193 APEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 13/211 (6%)
Query: 240 RVATDNFSDANKLGQGGFGAV-YKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQ 298
RV + F LG+G FG V + G A+K L K + E + + LQ
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 206
Query: 299 HRN--LVRLLGFCLERKERI-LVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEG-IAR 354
+ + L + + +R+ V E+ L F ++RE + E R + I
Sbjct: 207 NSRHPFLTALKYSFQTHDRLCFVMEYANGGEL----FFHLSRERVFSEDRARFYGAEIVS 262
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGY 414
L YLH S +++RDLK N++LD + + KI+DFG+ + E + + GT Y
Sbjct: 263 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEY 318
Query: 415 MAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
+APE + + D + GV++ E++ G+
Sbjct: 319 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 13/211 (6%)
Query: 240 RVATDNFSDANKLGQGGFGAV-YKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQ 298
RV + F LG+G FG V + G A+K L K + E + + LQ
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 203
Query: 299 HRN--LVRLLGFCLERKERI-LVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEG-IAR 354
+ + L + + +R+ V E+ L F ++RE + E R + I
Sbjct: 204 NSRHPFLTALKYSFQTHDRLCFVMEYANGGEL----FFHLSRERVFSEDRARFYGAEIVS 259
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGY 414
L YLH S +++RDLK N++LD + + KI+DFG+ + E + + GT Y
Sbjct: 260 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEY 315
Query: 415 MAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
+APE + + D + GV++ E++ G+
Sbjct: 316 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 26/233 (11%)
Query: 223 NVEETIAKSLQFDFETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETI-AVKRLSKN-- 279
N E I K ++ +++ +++ +G+G FG V + + A+K LSK
Sbjct: 58 NRYEKIVKKIR----GLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEM 113
Query: 280 -SKQGEIEFKNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINRE 338
+ F E ++A +V+L + K +V E++P L + + + E
Sbjct: 114 IKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPE 173
Query: 339 HMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEM 398
W K Y A +L L + +IHRD+K N+LLD + K++DFG +M
Sbjct: 174 --KWAKFY-----TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTC--MKM 224
Query: 399 DQT---HSDTNRVVGTFGYMAPEYVM----HGRFSVKSDIFSFGVLVLEIVSG 444
D+T H DT VGT Y++PE + G + + D +S GV + E++ G
Sbjct: 225 DETGMVHCDT--AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 83/163 (50%), Gaps = 16/163 (9%)
Query: 289 NEVLLLARLQ-HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYK 347
EV +L ++ H N+++L LV++ + L ++ + + ++ ++ K
Sbjct: 59 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT---LSEKETRK 115
Query: 348 IIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR 407
I+ + + LH +L I+HRDLK NILLD +MN K++DFG + + +
Sbjct: 116 IMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LRE 169
Query: 408 VVGTFGYMAPEYVM------HGRFSVKSDIFSFGVLVLEIVSG 444
V GT Y+APE + H + + D++S GV++ +++G
Sbjct: 170 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 113/274 (41%), Gaps = 64/274 (23%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARL-----QHRNLVRLL 306
LG G G V G +AVKR+ I+F + L+ +L H N++R
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRML-------IDFCDIALMEIKLLTESDDHPNVIRY- 74
Query: 307 GFCLERKERILVYEF-VPNASLDHFIFDP-INREHMTWEKRY---KIIEGIARGLLYLHE 361
+C E +R L + N +L + ++ E++ +K Y ++ IA G+ +LH
Sbjct: 75 -YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133
Query: 362 DSRLRIIHRDLKASNILLDSE-------------MNPKISDFGMARLFEMDQT--HSDTN 406
L+IIHRDLK NIL+ + + ISDFG+ + + Q + N
Sbjct: 134 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 190
Query: 407 RVVGTFGYMAPEYVMHG-------RFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDL 459
GT G+ APE + R + DIFS G + I+S K FG + E
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH-PFGDKYSRE-- 247
Query: 460 LTYAWRNWNEGAALNLMDPTMRGGSTSEMMKCIH 493
+RG + + MKC+H
Sbjct: 248 -----------------SNIIRGIFSLDEMKCLH 264
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 28/244 (11%)
Query: 224 VEETIAKSLQFDFETIRVATDNFSDANKLGQGGFGAVYKGM--LSNGETIAVKRLSKNSK 281
V++ S+QF TD + +G G + + + +N E AVK + K+ +
Sbjct: 10 VQQLHRNSIQF--------TDGYEVKEDIGVGSYSVCKRCIHKATNXE-FAVKIIDKSKR 60
Query: 282 QGEIEFKNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMT 341
E + +LL QH N++ L + K +V E L D I R+
Sbjct: 61 DPTEEIE---ILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGEL----LDKILRQKFF 113
Query: 342 WEKRYK-IIEGIARGLLYLHEDSRLRIIHRDLKASNIL-LDSEMNP---KISDFGMARLF 396
E+ ++ I + + YLH ++HRDLK SNIL +D NP +I DFG A+
Sbjct: 114 SEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170
Query: 397 EMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
+ T F +APE + + DI+S GVL+ ++G + G ++
Sbjct: 171 RAENGLLXTPCYTANF--VAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTP 228
Query: 457 EDLL 460
E++L
Sbjct: 229 EEIL 232
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 83/163 (50%), Gaps = 16/163 (9%)
Query: 289 NEVLLLARLQ-HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYK 347
EV +L ++ H N+++L LV++ + L ++ + + ++ ++ K
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT---LSEKETRK 128
Query: 348 IIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR 407
I+ + + LH +L I+HRDLK NILLD +MN K++DFG + + +
Sbjct: 129 IMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LRE 182
Query: 408 VVGTFGYMAPEYVM------HGRFSVKSDIFSFGVLVLEIVSG 444
V GT Y+APE + H + + D++S GV++ +++G
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 109/244 (44%), Gaps = 28/244 (11%)
Query: 224 VEETIAKSLQFDFETIRVATDNFSDANKLGQGGFGAVYKGM--LSNGETIAVKRLSKNSK 281
V++ S+QF TD + +G G + + + +N E AVK + K+ +
Sbjct: 10 VQQLHRNSIQF--------TDGYEVKEDIGVGSYSVCKRCIHKATNME-FAVKIIDKSKR 60
Query: 282 QGEIEFKNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMT 341
E + +LL QH N++ L + K +V E + L D I R+
Sbjct: 61 DPTEEIE---ILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGEL----LDKILRQKFF 113
Query: 342 WEKRYK-IIEGIARGLLYLHEDSRLRIIHRDLKASNIL-LDSEMNP---KISDFGMARLF 396
E+ ++ I + + YLH ++HRDLK SNIL +D NP +I DFG A+
Sbjct: 114 SEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170
Query: 397 EMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEET 456
+ T F +APE + + DI+S GVL+ +++G + G ++
Sbjct: 171 RAENGLLMTPCYTANF--VAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTP 228
Query: 457 EDLL 460
E++L
Sbjct: 229 EEIL 232
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 83/163 (50%), Gaps = 16/163 (9%)
Query: 289 NEVLLLARLQ-HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYK 347
EV +L ++ H N+++L LV++ + L ++ + + ++ ++ K
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT---LSEKETRK 128
Query: 348 IIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNR 407
I+ + + LH +L I+HRDLK NILLD +MN K++DFG + + +
Sbjct: 129 IMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LRS 182
Query: 408 VVGTFGYMAPEYVM------HGRFSVKSDIFSFGVLVLEIVSG 444
V GT Y+APE + H + + D++S GV++ +++G
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 107/236 (45%), Gaps = 41/236 (17%)
Query: 244 DNFSDANKLGQGGFGAVYKGMLSNG-ETIAVKRLSKNSKQGEIEFKN---EVLLLARLQH 299
DN+ + +G+G +G VY N + +A+K++++ + I+ K E+ +L RL+
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMF-EDLIDCKRILREITILNRLKS 86
Query: 300 RNLVRLLGFC-----LERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIAR 354
++RL L+ E +V E + ++ L PI +T + I+ +
Sbjct: 87 DYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTPI---FLTEQHVKTILYNLLL 142
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRV------ 408
G ++HE IIHRDLK +N LL+ + + KI DFG+AR D+ N +
Sbjct: 143 GEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEEN 199
Query: 409 -----------------VGTFGYMAPEYV-MHGRFSVKSDIFSFGVLVLEIVSGQK 446
V T Y APE + + ++ DI+S G + E+++ K
Sbjct: 200 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMK 255
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 108/240 (45%), Gaps = 31/240 (12%)
Query: 220 EDENVEETIAKSLQFDF----ETIRVAT---DNFSDANKLGQGGFGAVYKGML----SNG 268
E E+V+E +AK+ + DF ET T D F LG G FG V ML +G
Sbjct: 11 EQESVKEFLAKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESG 66
Query: 269 ETIAVKRLSKNS--KQGEIEFK-NEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
A+K L K K +IE NE +L + LV+L + +V E+V
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 326 SLDHFIFDPINREHMTWEKRYKIIEG-IARGLLYLHEDSRLRIIHRDLKASNILLDSEMN 384
+ F + R E + I YLH L +I+RDLK N+L+D +
Sbjct: 127 EM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 385 PKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+++DFG A+ + T + GT +APE ++ ++ D ++ GVL+ E+ +G
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 108/232 (46%), Gaps = 28/232 (12%)
Query: 246 FSDANKLGQGGFGAVYKGMLSN-GETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVR 304
+ D LG GG G V+ + ++ + +A+K++ Q E+ ++ RL H N+V+
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 305 L--------------LGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIE 350
+ +G E +V E++ + P+ EH +
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL-----FMY 127
Query: 351 GIARGLLYLHEDSRLRIIHRDLKASNILLDSE-MNPKISDFGMARLFEMDQTHS-DTNRV 408
+ RGL Y+H + ++HRDLK +N+ +++E + KI DFG+AR+ + +H +
Sbjct: 128 QLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEG 184
Query: 409 VGTFGYMAPEYVMH-GRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETEDL 459
+ T Y +P ++ ++ D+++ G + E+++G ++ F E E +
Sbjct: 185 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG--KTLFAGAHELEQM 234
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 23/222 (10%)
Query: 230 KSLQFDF-ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEF 287
K + +++ E + AT +LG+G FG V++ G AVK++ E+
Sbjct: 82 KPVDYEYREEVHWATHQL----RLGRGSFGEVHRMEDKQTGFQCAVKKVRL-----EVFR 132
Query: 288 KNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYK 347
E++ A L +V L G E + E + SL + + E R
Sbjct: 133 AEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV----KEQGCLPEDRAL 188
Query: 348 IIEGIA-RGLLYLHEDSRLRIIHRDLKASNILLDSE-MNPKISDFGMARLFEMD---QTH 402
G A GL YLH SR RI+H D+KA N+LL S+ + + DFG A + D ++
Sbjct: 189 YYLGQALEGLEYLH--SR-RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSL 245
Query: 403 SDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+ + GT +MAPE V+ K D++S ++L +++G
Sbjct: 246 LTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 36/255 (14%)
Query: 215 GKLKLEDENVEETIA-KSLQF----DFETIRVATDNFSDANKLGQGGFGAVYKGMLS-NG 268
G +K E + ++A K+L F+ D + +G G +G V G
Sbjct: 20 GPVKAEPAHTAASVAAKNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTG 79
Query: 269 ETIAVKRLSK------NSKQGEIEFKNEVLLLARLQHRNLVRLLGFCL------ERKERI 316
+ +A+K++ N+K+ E K +L +H N++ + E K
Sbjct: 80 QQVAIKKIPNAFDVVTNAKRTLRELK----ILKHFKHDNIIAIKDILRPTVPYGEFKSVY 135
Query: 317 LVYEFVPNASLDHFIF--DPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKA 374
+V + + + L I P+ EH+ RY + + + RGL Y+H ++IHRDLK
Sbjct: 136 VVLDLM-ESDLHQIIHSSQPLTLEHV----RYFLYQ-LLRGLKYMHS---AQVIHRDLKP 186
Query: 375 SNILLDSEMNPKISDFGMAR-LFEMDQTHSD-TNRVVGTFGYMAPEYVMH-GRFSVKSDI 431
SN+L++ KI DFGMAR L H V T Y APE ++ ++ D+
Sbjct: 187 SNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDL 246
Query: 432 FSFGVLVLEIVSGQK 446
+S G + E+++ ++
Sbjct: 247 WSVGCIFGEMLARRQ 261
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 32/211 (15%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVKRLSKNSK-------QGEIEFKNEVLLLARLQHRNLVR 304
LG+G +G V + + + ET+ + + K GE K E+ LL RL+H+N+++
Sbjct: 13 LGEGSYGKVKEVL--DSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 305 LLGFCL--ERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEG------IARGL 356
L+ E+++ +V E+ + P EKR+ + + + GL
Sbjct: 71 LVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVP--------EKRFPVCQAHGYFCQLIDGL 122
Query: 357 LYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMA 416
YLH I+H+D+K N+LL + KIS G+A G+ +
Sbjct: 123 EYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQP 179
Query: 417 PEYVMHG--RFS-VKSDIFSFGVLVLEIVSG 444
PE + +G FS K DI+S GV + I +G
Sbjct: 180 PE-IANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 240 RVATDNFSDANKLGQGGFGAV-YKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQ 298
+V ++F LG+G FG V + G A+K L K + E + V LQ
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 299 HRN--LVRLLGFCLERKERI-LVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEG-IAR 354
+ + L + + +R+ V E+ L F ++RE + E+R + I
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFYGAEIVS 116
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGY 414
L YLH +++RD+K N++LD + + KI+DFG+ + E + GT Y
Sbjct: 117 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEY 171
Query: 415 MAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
+APE + + D + GV++ E++ G+
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 240 RVATDNFSDANKLGQGGFGAV-YKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQ 298
+V ++F LG+G FG V + G A+K L K + E + V LQ
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 63
Query: 299 HRN--LVRLLGFCLERKERI-LVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEG-IAR 354
+ + L + + +R+ V E+ L F ++RE + E+R + I
Sbjct: 64 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFYGAEIVS 119
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGY 414
L YLH +++RD+K N++LD + + KI+DFG+ + E + GT Y
Sbjct: 120 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEY 174
Query: 415 MAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
+APE + + D + GV++ E++ G+
Sbjct: 175 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 240 RVATDNFSDANKLGQGGFGAV-YKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQ 298
+V ++F LG+G FG V + G A+K L K + E + V LQ
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 299 HRN--LVRLLGFCLERKERI-LVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEG-IAR 354
+ + L + + +R+ V E+ L F ++RE + E+R + I
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFYGAEIVS 116
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGY 414
L YLH +++RD+K N++LD + + KI+DFG+ + E + GT Y
Sbjct: 117 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEY 171
Query: 415 MAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
+APE + + D + GV++ E++ G+
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 240 RVATDNFSDANKLGQGGFGAV-YKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQ 298
+V ++F LG+G FG V + G A+K L K + E + V LQ
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 299 HRN--LVRLLGFCLERKERI-LVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEG-IAR 354
+ + L + + +R+ V E+ L F ++RE + E+R + I
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFYGAEIVS 116
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGY 414
L YLH +++RD+K N++LD + + KI+DFG+ + E + GT Y
Sbjct: 117 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEY 171
Query: 415 MAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
+APE + + D + GV++ E++ G+
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 240 RVATDNFSDANKLGQGGFGAV-YKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQ 298
+V ++F LG+G FG V + G A+K L K + E + V LQ
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 65
Query: 299 HRN--LVRLLGFCLERKERI-LVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEG-IAR 354
+ + L + + +R+ V E+ L F ++RE + E+R + I
Sbjct: 66 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFYGAEIVS 121
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGY 414
L YLH +++RD+K N++LD + + KI+DFG+ + E + GT Y
Sbjct: 122 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEY 176
Query: 415 MAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
+APE + + D + GV++ E++ G+
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 240 RVATDNFSDANKLGQGGFGAV-YKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQ 298
+V ++F LG+G FG V + G A+K L K + E + V LQ
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 299 HRN--LVRLLGFCLERKERI-LVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEG-IAR 354
+ + L + + +R+ V E+ L F ++RE + E+R + I
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFYGAEIVS 116
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGY 414
L YLH +++RD+K N++LD + + KI+DFG+ + E + GT Y
Sbjct: 117 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEY 171
Query: 415 MAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
+APE + + D + GV++ E++ G+
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 240 RVATDNFSDANKLGQGGFGAV-YKGMLSNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQ 298
+V ++F LG+G FG V + G A+K L K + E + V LQ
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 299 HRN--LVRLLGFCLERKERI-LVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEG-IAR 354
+ + L + + +R+ V E+ L F ++RE + E+R + I
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFYGAEIVS 116
Query: 355 GLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGY 414
L YLH +++RD+K N++LD + + KI+DFG+ + E + GT Y
Sbjct: 117 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEY 171
Query: 415 MAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQ 445
+APE + + D + GV++ E++ G+
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 18/124 (14%)
Query: 348 IIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQ------- 400
I IA + +LH ++HRDLK SNI + K+ DFG+ + D+
Sbjct: 169 IFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 401 ---THSDTNRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSGQKRSSFGTEEETE 457
++ VGT YM+PE + +S K DIFS G+++ E++ SF T+ E
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL-----YSFSTQMERV 280
Query: 458 DLLT 461
++T
Sbjct: 281 RIIT 284
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 240 RVATDNFSDANKLGQGGFGAVYKGMLSNGE-TIAVKRLS-KNSKQGEIEFKNEVLLLARL 297
R TD F +G+GGFG V++ + A+KR+ N + + EV LA+L
Sbjct: 3 RYLTD-FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL 61
Query: 298 QHRNLVRLLGFCLE 311
+H +VR LE
Sbjct: 62 EHPGIVRYFNAWLE 75
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 24/195 (12%)
Query: 236 FETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVK--RLSKNSKQGEIEFKNEVLL 293
F+++ V +S ++G GG V++ + + A+K L + Q ++NE+
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 294 LARLQHRN--LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEG 351
L +LQ + ++RL + + + +V E N L+ +W K+ K I+
Sbjct: 80 LNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLN------------SWLKKKKSIDP 126
Query: 352 IARGLLY------LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDT 405
R + +H + I+H DLK +N L+ M K+ DFG+A + D T
Sbjct: 127 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVK 185
Query: 406 NRVVGTFGYMAPEYV 420
+ VGT YM PE +
Sbjct: 186 DSQVGTVNYMPPEAI 200
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 266 SNGETIAVKRLSKNSKQGEIEFKNEVLLLARLQHRNLVRLLGFCLERKERILVYEFVPNA 325
SN + I++K SK + FKNE+ ++ +++ + G E ++YE++ N
Sbjct: 76 SNNDKISIK-----SKYDD--FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMEND 128
Query: 326 SLDHFIFDPINREHMTWEKRYK----------IIEGIARGLLYLHEDSRLRIIHRDLKAS 375
S+ F + +K Y II+ + Y+H + I HRD+K S
Sbjct: 129 SILKF-----DEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPS 181
Query: 376 NILLDSEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVMH--GRFSVKSDIFS 433
NIL+D K+SDFG + + +D+ + GT+ +M PE+ + K DI+S
Sbjct: 182 NILMDKNGRVKLSDFGESE-YMVDKKIKGSR---GTYEFMPPEFFSNESSYNGAKVDIWS 237
Query: 434 FGV 436
G+
Sbjct: 238 LGI 240
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 13/121 (10%)
Query: 331 IFDPINREHMTWEKRYK-IIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISD 389
+FD + + EK + I+ + + +LH ++ I+HRDLK NILLD M ++SD
Sbjct: 187 LFDYLTEKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSD 243
Query: 390 FGMARLFEMDQTHSDTNRVVGTFGYMAPEYV------MHGRFSVKSDIFSFGVLVLEIVS 443
FG + E + + GT GY+APE + H + + D+++ GV++ +++
Sbjct: 244 FGFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLA 300
Query: 444 G 444
G
Sbjct: 301 G 301
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 24/194 (12%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVK--RLSKNSKQGEIEFKNEVLLL 294
E I V +S ++G GG V++ + + A+K L + Q ++NE+ L
Sbjct: 5 ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 64
Query: 295 ARLQHRN--LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGI 352
+LQ + ++RL Y++ + + + N + +W K+ K I+
Sbjct: 65 NKLQQHSDKIIRL-------------YDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPW 111
Query: 353 ARGLLY------LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
R + +H + I+H DLK +N L+ M K+ DFG+A + D T +
Sbjct: 112 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKD 170
Query: 407 RVVGTFGYMAPEYV 420
VGT YM PE +
Sbjct: 171 SQVGTVNYMPPEAI 184
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 25/230 (10%)
Query: 233 QFDF--ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKN 289
Q DF +T+ + L +GGF VY+ + +G A+KRL N ++
Sbjct: 15 QSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQ 74
Query: 290 EVLLLARLQ-HRNLVRLLGFCLERKER-------ILVYEFVPNASLDHFIFDPINREHMT 341
EV + +L H N+V+ KE L+ + L F+ +R ++
Sbjct: 75 EVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLS 134
Query: 342 WEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEM--D 399
+ KI R + ++H + IIHRDLK N+LL ++ K+ DFG A D
Sbjct: 135 CDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPD 193
Query: 400 QTHSDTNRVV--------GTFGYMAPEYV-MHGRFSV--KSDIFSFGVLV 438
+ S R + T Y PE + ++ F + K DI++ G ++
Sbjct: 194 YSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVK--RLSKNSKQGEIEFKNEVLLL 294
E I V +S ++G GG V++ + + A+K L + Q ++NE+ L
Sbjct: 49 ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 108
Query: 295 ARLQHRN--LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGI 352
+LQ + ++RL + + + +V E N L+ +W K+ K I+
Sbjct: 109 NKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLN------------SWLKKKKSIDPW 155
Query: 353 ARGLLY------LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
R + +H + I+H DLK +N L+ M K+ DFG+A + D T +
Sbjct: 156 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKD 214
Query: 407 RVVGTFGYMAPEYV 420
VGT YM PE +
Sbjct: 215 SQVGTVNYMPPEAI 228
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKNEVLL 293
D+E R + +LG+G FG V++ G AVK++ E+ E++
Sbjct: 64 DYE-YREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRL-----EVFRVEELVA 117
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
A L +V L G E + E + SL I + E R G A
Sbjct: 118 CAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI----KQMGCLPEDRALYYLGQA 173
Query: 354 -RGLLYLHEDSRLRIIHRDLKASNILLDSEMN-PKISDFGMARLFEMD---QTHSDTNRV 408
GL YLH RI+H D+KA N+LL S+ + + DFG A + D ++ + +
Sbjct: 174 LEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI 230
Query: 409 VGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
GT +MAPE VM K DI+S ++L +++G
Sbjct: 231 PGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 24/194 (12%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVK--RLSKNSKQGEIEFKNEVLLL 294
E I V +S ++G GG V++ + + A+K L + Q ++NE+ L
Sbjct: 1 ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 60
Query: 295 ARLQHRN--LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGI 352
+LQ + ++RL Y++ + + + N + +W K+ K I+
Sbjct: 61 NKLQQHSDKIIRL-------------YDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPW 107
Query: 353 ARGLLY------LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
R + +H + I+H DLK +N L+ M K+ DFG+A + D T +
Sbjct: 108 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKD 166
Query: 407 RVVGTFGYMAPEYV 420
VGT YM PE +
Sbjct: 167 SQVGTVNYMPPEAI 180
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVK--RLSKNSKQGEIEFKNEVLLL 294
E I V +S ++G GG V++ + + A+K L + Q ++NE+ L
Sbjct: 49 ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 108
Query: 295 ARLQHRN--LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGI 352
+LQ + ++RL + + + +V E N L+ +W K+ K I+
Sbjct: 109 NKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLN------------SWLKKKKSIDPW 155
Query: 353 ARGLLY------LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
R + +H + I+H DLK +N L+ M K+ DFG+A + D T +
Sbjct: 156 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKD 214
Query: 407 RVVGTFGYMAPEYV 420
VGT YM PE +
Sbjct: 215 SQVGTVNYMPPEAI 228
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVK--RLSKNSKQGEIEFKNEVLLL 294
E I V +S ++G GG V++ + + A+K L + Q ++NE+ L
Sbjct: 2 ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 61
Query: 295 ARLQHRN--LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGI 352
+LQ + ++RL + + + +V E N L+ +W K+ K I+
Sbjct: 62 NKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLN------------SWLKKKKSIDPW 108
Query: 353 ARGLLY------LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
R + +H + I+H DLK +N L+ M K+ DFG+A + D T +
Sbjct: 109 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKD 167
Query: 407 RVVGTFGYMAPEYV 420
VGT YM PE +
Sbjct: 168 SQVGTVNYMPPEAI 181
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 18/250 (7%)
Query: 208 ICIFLRVGKLKLEDE-NVEETI--AKSLQFDFETIRVATDNFSDANKLGQGGFGAVYKGM 264
IC++ L E N+ E + AK + +R+ ++F +G+G FG V
Sbjct: 35 ICLYDECNNSPLRREKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVK 94
Query: 265 LSNGETI-AVKRLSKNSKQGEIE---FKNEVLLLARLQHRNLVRLLGFCLERKERILVYE 320
L N + + A+K L+K E F+ E +L + + L + LV +
Sbjct: 95 LKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMD 154
Query: 321 FVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLLYLHEDSRLRIIHRDLKASNILLD 380
+ L + +R + Y +A ++ + +L +HRD+K NIL+D
Sbjct: 155 YYVGGDLLTLLSKFEDRLPEEMARFY-----LAEMVIAIDSVHQLHYVHRDIKPDNILMD 209
Query: 381 SEMNPKISDFGMARLFEMDQTHSDTNRVVGTFGYMAPEYVM-----HGRFSVKSDIFSFG 435
+ +++DFG L M+ ++ VGT Y++PE + GR+ + D +S G
Sbjct: 210 MNGHIRLADFGSC-LKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLG 268
Query: 436 VLVLEIVSGQ 445
V + E++ G+
Sbjct: 269 VCMYEMLYGE 278
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 34/211 (16%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEI-----------EFKNEVLLLARLQHR 300
+ G +GAV G+ S G +A+KR+ G E+ LL H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 301 NLVRLLGFCLERKE----RILVYEFVPNASLDHFIFDP---INREHMTWEKRYKIIEGIA 353
N++ L + +E ++ + + L I D I+ +H+ + + I
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY-----FMYHIL 144
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR--LFEMDQTHSDTNRVVGT 411
GL LHE ++HRDL NILL + I DF +AR + ++TH T+R
Sbjct: 145 LGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR---- 197
Query: 412 FGYMAPEYVMHGR-FSVKSDIFSFGVLVLEI 441
Y APE VM + F+ D++S G ++ E+
Sbjct: 198 -WYRAPELVMQFKGFTKLVDMWSAGCVMAEM 227
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 252 LGQGGFGAVYKGMLSNGETIAVKRLSKNSKQGEI-----------EFKNEVLLLARLQHR 300
+ G +GAV G+ S G +A+KR+ G E+ LL H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 301 NLVRLLGFCLERKE-----RILVYEFVPNASLDHFIFDP---INREHMTWEKRYKIIEGI 352
N++ L + +E LV E + L I D I+ +H+ + + I
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQY-----FMYHI 143
Query: 353 ARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMAR--LFEMDQTHSDTNRVVG 410
GL LHE ++HRDL NILL + I DF +AR + ++TH T+R
Sbjct: 144 LLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR--- 197
Query: 411 TFGYMAPEYVMHGR-FSVKSDIFSFGVLVLEI 441
Y APE VM + F+ D++S G ++ E+
Sbjct: 198 --WYRAPELVMQFKGFTKLVDMWSAGCVMAEM 227
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 24/195 (12%)
Query: 236 FETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVK--RLSKNSKQGEIEFKNEVLL 293
F+++ V +S ++G GG V++ + + A+K L + Q ++NE+
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 294 LARLQHRN--LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEG 351
L +LQ + ++RL + + + +V E N L+ +W K+ K I+
Sbjct: 80 LNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLN------------SWLKKKKSIDP 126
Query: 352 IARGLLY------LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDT 405
R + +H + I+H DLK +N L+ M K+ DFG+A + D
Sbjct: 127 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVK 185
Query: 406 NRVVGTFGYMAPEYV 420
+ VGT YM PE +
Sbjct: 186 DSQVGTVNYMPPEAI 200
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 107/236 (45%), Gaps = 49/236 (20%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKNEVLL-- 293
E R D F GQG FG V G S G ++A+K++ ++ + F+N L
Sbjct: 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-----FRNRELQIM 70
Query: 294 --LARLQHRNLVRLLGFCLERKERI-------LVYEFVPNASLDHFIFDPINREHMTWEK 344
LA L H N+V+L + ER +V E+VP D ++R + +
Sbjct: 71 QDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP---------DTLHRCCRNYYR 121
Query: 345 R-------------YKIIEGIARGLLYLHEDSRLRIIHRDLKASNILL-DSEMNPKISDF 390
R +++I I G L+L + + HRD+K N+L+ +++ K+ DF
Sbjct: 122 RQVAPPPILIKVFLFQLIRSI--GCLHL---PSVNVCHRDIKPHNVLVNEADGTLKLCDF 176
Query: 391 GMARLFEMDQTHSDTNRVVGTFGYMAPEYVM-HGRFSVKSDIFSFGVLVLEIVSGQ 445
G A+ ++ + + + + Y APE + + ++ DI+S G + E++ G+
Sbjct: 177 GSAK--KLSPSEPNVAYICSRY-YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 25/219 (11%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKNEVLL 293
D+E R + ++G+G FG V++ G AVK++ E+ E++
Sbjct: 66 DYE-YREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRL-----EVFRVEELVA 119
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFD----PINREHMTWEKRYKII 349
A L +V L G E + E + SL I P +R Y +
Sbjct: 120 CAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR------ALYYLG 173
Query: 350 EGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMN-PKISDFGMARLFEMD---QTHSDT 405
+ + GL YLH RI+H D+KA N+LL S+ + + DFG A + D ++
Sbjct: 174 QAL-EGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG 229
Query: 406 NRVVGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
+ + GT +MAPE VM K DI+S ++L +++G
Sbjct: 230 DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Query: 235 DFETIRVATDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKNEVLL 293
D+E R + ++G+G FG V++ G AVK++ E+ E++
Sbjct: 50 DYE-YREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRL-----EVFRVEELVA 103
Query: 294 LARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIA 353
A L +V L G E + E + SL I + E R G A
Sbjct: 104 CAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI----KQMGCLPEDRALYYLGQA 159
Query: 354 -RGLLYLHEDSRLRIIHRDLKASNILLDSEMN-PKISDFGMARLFEMD---QTHSDTNRV 408
GL YLH RI+H D+KA N+LL S+ + + DFG A + D ++ + +
Sbjct: 160 LEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI 216
Query: 409 VGTFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
GT +MAPE VM K DI+S ++L +++G
Sbjct: 217 PGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSK------NSKQGE--IEFKNEVLLL 294
D + + LG G G V + +A+K +SK ++++ + + + E+ +L
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 295 ARLQHRNLVRLLGFCLERKERILVYEFVPNASL-DHFIFDPINREHMTWEKRYKIIEGIA 353
+L H ++++ F + ++ +V E + L D + + +E Y+++ +
Sbjct: 76 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 134
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNP---KISDFGMARLFEMDQTHSDTNRVVG 410
YLHE+ IIHRDLK N+LL S+ KI+DFG +++ + +T S + G
Sbjct: 135 ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGET-SLMRTLCG 184
Query: 411 TFGYMAPEYVMH---GRFSVKSDIFSFGVLVLEIVSG 444
T Y+APE ++ ++ D +S GV++ +SG
Sbjct: 185 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 243 TDNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSK----------NSKQGEIEFKNEV 291
+ +S + LG G FG V+ + + + VK + K + K G++ E+
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTL--EI 80
Query: 292 LLLARLQHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYK-IIE 350
+L+R++H N++++L + LV E + LD F F I+R E I
Sbjct: 81 AILSRVEHANIIKVLDIFENQGFFQLVME-KHGSGLDLFAF--IDRHPRLDEPLASYIFR 137
Query: 351 GIARGLLYLHEDSRLR-IIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTNRVV 409
+ + YL RL+ IIHRD+K NI++ + K+ DFG A E +
Sbjct: 138 QLVSAVGYL----RLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLF---YTFC 190
Query: 410 GTFGYMAPEYVMHGRF-SVKSDIFSFGVLVLEIV 442
GT Y APE +M + + +++S GV + +V
Sbjct: 191 GTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSK------NSKQGE--IEFKNEVLLL 294
D + + LG G G V + +A+K +SK ++++ + + + E+ +L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 295 ARLQHRNLVRLLGFCLERKERILVYEFVPNASL-DHFIFDPINREHMTWEKRYKIIEGIA 353
+L H ++++ F + ++ +V E + L D + + +E Y+++ +
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNP---KISDFGMARLFEMDQTHSDTNRVVG 410
YLHE+ IIHRDLK N+LL S+ KI+DFG +++ + +T S + G
Sbjct: 129 ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGET-SLMRTLCG 178
Query: 411 TFGYMAPEYVMH---GRFSVKSDIFSFGVLVLEIVSG 444
T Y+APE ++ ++ D +S GV++ +SG
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSK------NSKQGE--IEFKNEVLLL 294
D + + LG G G V + +A+K +SK ++++ + + + E+ +L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 295 ARLQHRNLVRLLGFCLERKERILVYEFVPNASL-DHFIFDPINREHMTWEKRYKIIEGIA 353
+L H ++++ F + ++ +V E + L D + + +E Y+++ +
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNP---KISDFGMARLFEMDQTHSDTNRVVG 410
YLHE+ IIHRDLK N+LL S+ KI+DFG +++ + +T S + G
Sbjct: 129 ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGET-SLMRTLCG 178
Query: 411 TFGYMAPEYVMH---GRFSVKSDIFSFGVLVLEIVSG 444
T Y+APE ++ ++ D +S GV++ +SG
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSK------NSKQGE--IEFKNEVLLL 294
D + + LG G G V + +A+K +SK ++++ + + + E+ +L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 295 ARLQHRNLVRLLGFCLERKERILVYEFVPNASL-DHFIFDPINREHMTWEKRYKIIEGIA 353
+L H ++++ F + ++ +V E + L D + + +E Y+++ +
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNP---KISDFGMARLFEMDQTHSDTNRVVG 410
YLHE+ IIHRDLK N+LL S+ KI+DFG +++ + +T S + G
Sbjct: 129 ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGET-SLMRTLCG 178
Query: 411 TFGYMAPEYVMH---GRFSVKSDIFSFGVLVLEIVSG 444
T Y+APE ++ ++ D +S GV++ +SG
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVKRLSK------NSKQGE--IEFKNEVLLL 294
D + + LG G G V + +A+K +SK ++++ + + + E+ +L
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 295 ARLQHRNLVRLLGFCLERKERILVYEFVPNASL-DHFIFDPINREHMTWEKRYKIIEGIA 353
+L H ++++ F + ++ +V E + L D + + +E Y+++ +
Sbjct: 69 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 127
Query: 354 RGLLYLHEDSRLRIIHRDLKASNILLDSEMNP---KISDFGMARLFEMDQTHSDTNRVVG 410
YLHE+ IIHRDLK N+LL S+ KI+DFG +++ + +T S + G
Sbjct: 128 ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGET-SLMRTLCG 177
Query: 411 TFGYMAPEYVMH---GRFSVKSDIFSFGVLVLEIVSG 444
T Y+APE ++ ++ D +S GV++ +SG
Sbjct: 178 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 30/227 (13%)
Query: 242 ATDNFS---------DANKLGQGGFGAVYKGM-LSNGETIAVKRLSKNSKQGEIEFKNEV 291
+TD+FS + LG+G V + L + AVK + K EV
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 292 LLLARLQ-HRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIE 350
+L + Q HRN++ L+ F E LV+E + S+ I R H + +++
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH---KRRHFNELEASVVVQ 118
Query: 351 GIARGLLYLHEDSRLRIIHRDLKASNILLD--SEMNP-KISDFGMARLFEMDQTHSDTN- 406
+A L +LH I HRDLK NIL + ++++P KI DFG+ +++ S +
Sbjct: 119 DVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPIST 175
Query: 407 ----RVVGTFGYMAPEYV-----MHGRFSVKSDIFSFGVLVLEIVSG 444
G+ YMAPE V + + D++S GV++ ++SG
Sbjct: 176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVK-----RLSKNSKQGEIEFKNEVLLLARL 297
D + +G+G F V + + G+ AVK + + + + K E + L
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLL 357
+H ++V LL +V+EF+ A L F+ + R + + R +L
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQIL 142
Query: 358 ----YLHEDSRLRIIHRDLKASNILLDSEMNP---KISDFGMARLFEMDQTHSDTNRVVG 410
Y H+++ IIHRD+K +LL S+ N K+ FG+A ++ ++ VG
Sbjct: 143 EALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRVG 197
Query: 411 TFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
T +MAPE V + D++ GV++ ++SG
Sbjct: 198 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 24/194 (12%)
Query: 237 ETIRVATDNFSDANKLGQGGFGAVYKGMLSNGETIAVK--RLSKNSKQGEIEFKNEVLLL 294
E I V +S ++G GG V++ + + A+K L + Q ++NE+ L
Sbjct: 49 ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 108
Query: 295 ARLQHRN--LVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGI 352
+LQ + ++RL + + + +V E N L+ +W K+ K I+
Sbjct: 109 NKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLN------------SWLKKKKSIDPW 155
Query: 353 ARGLLY------LHEDSRLRIIHRDLKASNILLDSEMNPKISDFGMARLFEMDQTHSDTN 406
R + +H + I+H DLK +N L+ M K+ DFG+A + D T +
Sbjct: 156 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKD 214
Query: 407 RVVGTFGYMAPEYV 420
VG YM PE +
Sbjct: 215 SQVGAVNYMPPEAI 228
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 244 DNFSDANKLGQGGFGAVYKGM-LSNGETIAVK-----RLSKNSKQGEIEFKNEVLLLARL 297
D + +G+G F V + + G+ AVK + + + + K E + L
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 298 QHRNLVRLLGFCLERKERILVYEFVPNASLDHFIFDPINREHMTWEKRYKIIEGIARGLL 357
+H ++V LL +V+EF+ A L F+ + R + + R +L
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 358 ----YLHEDSRLRIIHRDLKASNILLDSEMNP---KISDFGMARLFEMDQTHSDTNRVVG 410
Y H+++ IIHRD+K +LL S+ N K+ FG+A ++ ++ VG
Sbjct: 141 EALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRVG 195
Query: 411 TFGYMAPEYVMHGRFSVKSDIFSFGVLVLEIVSG 444
T +MAPE V + D++ GV++ ++SG
Sbjct: 196 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,991,929
Number of Sequences: 62578
Number of extensions: 699209
Number of successful extensions: 4320
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 207
Number of HSP's that attempted gapping in prelim test: 1776
Number of HSP's gapped (non-prelim): 1129
length of query: 577
length of database: 14,973,337
effective HSP length: 104
effective length of query: 473
effective length of database: 8,465,225
effective search space: 4004051425
effective search space used: 4004051425
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)