BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008109
(577 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 195 bits (495), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 161/574 (28%), Positives = 257/574 (44%), Gaps = 77/574 (13%)
Query: 30 RHYKFNVELKNVTRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQ-HNISIHWHG 88
RHYK+ VE C+ ++ +NGQFPGP I A GD +++++ N + + IHWHG
Sbjct: 4 RHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHG 63
Query: 89 IRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHISWLRST-LYGPIIIL 147
I Q + WADG A I+QC I G+++ YNFT V GT ++H H+ RS LYG +I+
Sbjct: 64 ILQRGTPWADGTASISQCAINPGETFFYNFT-VDNPGTFFYHGHLGMQRSAGLYGSLIVD 122
Query: 148 PKRGIPYPFAKPYKEVPIVFGEWFKSDTE----AIINQALQTGGGP-------------N 190
P +G PF E+ ++ +W+ + ++ ++ G P +
Sbjct: 123 PPQGKKEPFHYD-GEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCS 181
Query: 191 VSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEV 250
++ Y N P L + + V KTY +R+ ++ L F+I NH L VVE
Sbjct: 182 IAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEA 241
Query: 251 DAVYVKPFETETLVITPGQTTNVLLETKPHYPSATFFMTARPYVTGLGTFDNSTVAGILE 310
D YV+PF T + I G++ +VL+ T + PS ++++ G +T G+
Sbjct: 242 DGNYVQPFYTSDIDIYSGESYSVLITTDQN-PSENYWVS-----VGTRARHPNTPPGLTL 295
Query: 311 YEKPLNFIHSGNSXXXXXXXXXXXXXXNDTNFVTNFVNKLRSLGSAQFPA----NVPQNV 366
N++ N V+KL + Q PA + +N
Sbjct: 296 -----------------------------LNYLPNSVSKLPTSPPPQTPAWDDFDRSKNF 326
Query: 367 DKRFFFTVGLGTSPCPRNQ-----TCQGPNGTMFEASINNISFVMPTTALLQAHFTGQSN 421
R +G P N+ Q + +IN++S +P T L A + N
Sbjct: 327 TYRITAAMGSPKPPVKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAM---KYN 383
Query: 422 GVYVPDF-PTSPLIPFNYT-GNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILG---AE 476
++ D P + P +Y PP N G + V++I+Q+ +++ +E
Sbjct: 384 LLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSE 443
Query: 477 NHPLHLHXXXXXXXXXXXXXXDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLADNPGV 536
HP HLH ++ + NL +P RNTV + GW AIRF+ADNPGV
Sbjct: 444 THPWHLHGHDFWVLGYGDGKFSAEEE-SSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGV 502
Query: 537 WFMHCHLEVHTSWGLKTAW---LVLDGKLPNQKL 567
W HCH+E H G+ + + G++P + L
Sbjct: 503 WAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTKAL 536
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 149/545 (27%), Positives = 230/545 (42%), Gaps = 109/545 (20%)
Query: 33 KFNVELKNVTRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQH-----NISIHWH 87
+ +VT T+ V NG FPGP I +GD I V++++ + +IHWH
Sbjct: 7 DLTISNADVTPDGFTRAAVVANGVFPGPLITGNKGDNFQINVIDNLTNATMLKTTTIHWH 66
Query: 88 GIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHIS-WLRSTLYGPIII 146
G+ Q + WADGPA++ QCPI +G S++Y+FT+ Q GT W+H+H+S L GP+++
Sbjct: 67 GLFQHGTNWADGPAFVNQCPIASGNSFLYDFTVPDQAGTFWYHSHLSTQYCDGLRGPLVV 126
Query: 147 LPKRGIPYPFAKPY----KEVPIVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPG 202
P+A Y I +W+ T A + A P +D+ NGL G
Sbjct: 127 YDPSD---PYASMYDVDDDTTVITLSDWYH--TAAKLGPAF-----PPNADSVLINGL-G 175
Query: 203 PLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETET 262
+A D + V+ K Y RLV+ + + + FSI H +T++EVD V +P E ++
Sbjct: 176 RFAGGNASDLAVITVEQNKRYRFRLVSLSCDPNFTFSIDGHNMTIIEVDGVNHEPLEVDS 235
Query: 263 LVITPGQTTNVLLETKPHYPSATFFMTARPYVTGLGTFDNS--TVAGILEYEKPLNFIHS 320
+ I Q + +L + +++ A P GT D + + IL Y +
Sbjct: 236 IQIFASQRYSFVLNATQSVDN--YWIRAIP---NTGTIDTTGGLNSAILRYSGADIVDPT 290
Query: 321 GNSXXXXXXXXXXXXXXNDTNFVTNFVNKLRSLGSAQFPA-------NVPQNVDKRFFFT 373
N+ T+ + L L S P ++ N+D F
Sbjct: 291 ANAT---------------TSVIPLVETDLVPLDSPAAPGDPVVGGVDLAMNLDFSF--- 332
Query: 374 VGLGTSPCPRNQTCQGPNGTMFEASINNISFVMPTTALLQAHFTGQSNGVYVPDFPTSPL 433
NGT F INN + + PT +L +G + S L
Sbjct: 333 -----------------NGTNF--FINNETLIPPTVPVLLQILSGAQSA--------SDL 365
Query: 434 IPFNYTGNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAEN-----HPLHLHXXXXX 488
+P TG + LP N+++EL T++ G N HP HLH
Sbjct: 366 LP---TG------------SVYTLPLNSTIELSFPITTVNGVTNAPGAPHPFHLHGHAFS 410
Query: 489 XXXXXXXXXDPNKDPAKFNLVDPIERNTVGVPS-GGWVAIRFLADNPGVWFMHCHLEVHT 547
+ +N V+P+ R+TV + G V IRF DN G WF+HCH++ H
Sbjct: 411 VVRSAGS--------SDYNYVNPVRRDTVSTGNPGDNVTIRFTTDNAGPWFLHCHIDFHL 462
Query: 548 SWGLK 552
G
Sbjct: 463 EAGFA 467
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 147/533 (27%), Positives = 216/533 (40%), Gaps = 92/533 (17%)
Query: 48 KTLVSVNGQFPGPRIVAREGDRLLIKVV----NHVQ-HNISIHWHGIRQLRSGWADGPAY 102
+ + VNG FP P I ++GDR + VV NH + SIHWHG Q + WADGPA+
Sbjct: 22 RDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTNWADGPAF 81
Query: 103 ITQCPIQTGQSYIYNFTIVGQRGTLWWHAHIS-WLRSTLYGPIIILPKRGIPYPFAKPY- 160
+ QCPI +G S++Y+F + Q GT W+H+H+S L GP ++ + P A Y
Sbjct: 82 VNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPKD---PHASRYD 138
Query: 161 ---KEVPIVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKV 217
+ I +W+ T A + G +DA NGL G + + V
Sbjct: 139 VDNESTVITLTDWYH--TAARLGPRFPLG-----ADATLINGL-GRSASTPTAALAVINV 190
Query: 218 KSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTNVLLET 277
+ GK Y RLV+ + + + FSI H LTV+EVD + +P +++ I Q + +L
Sbjct: 191 QHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNA 250
Query: 278 KPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSXXXXXXXXXXXXXX 337
+++ A P +G F + IL Y+
Sbjct: 251 N--QTVGNYWIRANPNFGTVG-FAGGINSAILRYQG---------------APVAEPTTT 292
Query: 338 NDTNFVTNFVNKLRSLGSAQFPAN-VPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFE 396
T+ + L L P + P VDK NGT F
Sbjct: 293 QTTSVIPLIETNLHPLARMPVPGSPTPGGVDKALNLAFNF--------------NGTNF- 337
Query: 397 ASINNISFVMPTTALLQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVV 456
INN SF PT +L +G + P + P
Sbjct: 338 -FINNASFTPPTVPVLLQILSGAQTAQDL--LPAGSVYP--------------------- 373
Query: 457 LPFNTSVELIMQDTSILGAENHPLHLHXXXXXXXXXXXXXXDPNKDPAKFNLVDPIERNT 516
LP ++++E+ + T++ HP HLH + +N DPI R+
Sbjct: 374 LPAHSTIEITLPATALAPGAPHPFHLHGHAFAVVR--------SAGSTTYNYNDPIFRDV 425
Query: 517 V--GVPSGGW-VAIRFLADNPGVWFMHCHLEVHTSWGLKTAWL--VLDGKLPN 564
V G P+ G V IRF DNPG WF+HCH++ H G + V D K N
Sbjct: 426 VSTGTPAAGDNVTIRFQTDNPGPWFLHCHIDFHLEAGFAIVFAEDVADVKAAN 478
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 142/530 (26%), Positives = 221/530 (41%), Gaps = 92/530 (17%)
Query: 47 TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQH-----NISIHWHGIRQLRSGWADGPA 101
++ + VN FP P I +GDR + V++++ + + SIHWHG Q + WADGPA
Sbjct: 21 SRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 102 YITQCPIQTGQSYIYNFTIVGQRGTLWWHAHIS-WLRSTLYGPIIILPKRGIPYPFAKPY 160
++ QCPI TG +++Y+F + Q GT W+H+H+S L GPI++ P A Y
Sbjct: 81 FVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVVYDPND---PHASLY 137
Query: 161 ----KEVPIVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLK 216
I +W+ + A + G +DA NGL G A D +
Sbjct: 138 DVDDDSTVITLADWY--------HLAAKVGAPVPTADATLINGL-GRSAATLAADLAVIT 188
Query: 217 VKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTNVLLE 276
V GK Y RLV+ + + + FSI H+LTV+E D+V +KP ++L I Q + +L
Sbjct: 189 VTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSFVLN 248
Query: 277 TKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSXXXXXXXXXXXXX 336
+ +++ A P +G F T + IL Y+
Sbjct: 249 ADQDVDN--YWIRALPN-SGTQNFAGGTNSAILRYDG------------AAPVEPTTSQT 293
Query: 337 XNDTNFVTNFVNKLRSLGSAQFPANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFE 396
+ V + + L+ G+A + P VD G G F
Sbjct: 294 PSTNPLVESALTTLK--GTAAPGSPTPGGVDLALNMAFGFA--------------GGNF- 336
Query: 397 ASINNISFVMPTTALLQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVV 456
+IN SF PT +L +G + + L+P +
Sbjct: 337 -TINGASFTPPTVPVLLQILSGAQSA--------ADLLP---------------AGSVYS 372
Query: 457 LPFNTSVELIMQDTSILGAENHPLHLHXXXXXXXXXXXXXXDPNKDPAKFNLVDPIERNT 516
LP N +E+ + T+ HP HLH + + +N +P+ R+
Sbjct: 373 LPANADIEISLPATAAAPGFPHPFHLHGHVFAVVR--------SAGSSTYNYANPVYRDV 424
Query: 517 V--GVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVLDGKLPN 564
V G P G V IRF DNPG WF+HCH++ H G +V+ +P+
Sbjct: 425 VSTGAP-GDNVTIRFRTDNPGPWFLHCHIDFHLEAGFA---VVMAEDIPD 470
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 142/530 (26%), Positives = 221/530 (41%), Gaps = 92/530 (17%)
Query: 47 TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQH-----NISIHWHGIRQLRSGWADGPA 101
++ + VN FP P I +GDR + V++++ + + SIHWHG Q + WADGPA
Sbjct: 21 SRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 102 YITQCPIQTGQSYIYNFTIVGQRGTLWWHAHIS-WLRSTLYGPIIILPKRGIPYPFAKPY 160
++ QCPI TG +++Y+F + Q GT W+H+H+S L GPI++ P A Y
Sbjct: 81 FVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVVYDPND---PHASLY 137
Query: 161 ----KEVPIVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLK 216
I +W+ + A + G +DA NGL G A D +
Sbjct: 138 DVDDDSTVITLADWY--------HLAAKVGAPVPTADATLINGL-GRSAATLAADLAVIT 188
Query: 217 VKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTNVLLE 276
V GK Y RLV+ + + + FSI H+LTV+E D+V +KP ++L I Q + +L
Sbjct: 189 VTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSFVLN 248
Query: 277 TKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSXXXXXXXXXXXXX 336
+ +++ A P +G F T + IL Y+
Sbjct: 249 ADQDVDN--YWIRALPN-SGTQNFAGGTNSAILRYDG------------AAPVEPTTSQT 293
Query: 337 XNDTNFVTNFVNKLRSLGSAQFPANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFE 396
+ V + + L+ G+A + P VD G G F
Sbjct: 294 PSTNPLVESALTTLK--GTAAPGSPTPGGVDLALNMAFGFA--------------GGNF- 336
Query: 397 ASINNISFVMPTTALLQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVV 456
+IN SF PT +L +G + + L+P +
Sbjct: 337 -TINGASFTPPTVPVLLQILSGAQSA--------ADLLP---------------AGSVYS 372
Query: 457 LPFNTSVELIMQDTSILGAENHPLHLHXXXXXXXXXXXXXXDPNKDPAKFNLVDPIERNT 516
LP N +E+ + T+ HP HLH + + +N +P+ R+
Sbjct: 373 LPANADIEISLPATAAAPGFPHPFHLHGHVFAVVR--------SAGSSTYNYANPVYRDV 424
Query: 517 V--GVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVLDGKLPN 564
V G P G V IRF DNPG WF+HCH++ H G +V+ +P+
Sbjct: 425 VSTGAP-GDNVTIRFRTDNPGPWFLHCHIDFHLEAGFA---VVMAEDIPD 470
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 135/514 (26%), Positives = 211/514 (41%), Gaps = 81/514 (15%)
Query: 47 TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQH-----NISIHWHGIRQLRSGWADGPA 101
++ + VN FP P I +GDR + V++++ + + SIHWHG Q + WADGPA
Sbjct: 21 SRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 102 YITQCPIQTGQSYIYNFTIVGQRGTLWWHAHIS-WLRSTLYGPIIIL-PKRGIPYPFAKP 159
++ QCPI TG +++Y+F + Q GT W+H+H+S L GPI++ P+ +
Sbjct: 81 FVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVVYDPQDPHKSLYDVD 140
Query: 160 YKEVPIVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKS 219
I +W+ + A + G +DA NGL G + D + V
Sbjct: 141 DDSTVITLADWY--------HLAAKVGSPVPTADATLINGL-GRSIDTLNADLAVITVTK 191
Query: 220 GKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTNVLLETKP 279
GK Y RLV+ + + + FSI H+LTV+E D+V +KP +++ I Q + +L
Sbjct: 192 GKRYRFRLVSLSCDPNHVFSIDGHSLTVIEADSVNLKPQTVDSIQIFAAQRYSFVLNADQ 251
Query: 280 HYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSXXXXXXXXXXXXXXND 339
+++ A P +G FD + IL Y+ +
Sbjct: 252 DV--GNYWIRALPN-SGTRNFDGGVNSAILRYDG------------AAPVEPTTSQTPST 296
Query: 340 TNFVTNFVNKLRSLGSAQFPANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEASI 399
V + + L + PA P VD G G F +I
Sbjct: 297 NPLVESALTTLEGTAAPGSPA--PGGVDLALNMAFGFA--------------GGKF--TI 338
Query: 400 NNISFVMPTTALLQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVVLPF 459
N SF PT +L +G + ++ SG+ + LP
Sbjct: 339 NGASFTPPTVPVLLQILSGAQSA----------------------QDLLPSGS-VYSLPA 375
Query: 460 NTSVELIMQDTSILGAENHPLHLHXXXXXXXXXXXXXXDPNKDPAKFNLVDPIERNTVGV 519
N +E+ + T+ HP HLH + +N +P+ R+ V
Sbjct: 376 NADIEISLPATAAAPGFPHPFHLHGHTFAVVRSAGS--------STYNYENPVYRDVVST 427
Query: 520 PS-GGWVAIRFLADNPGVWFMHCHLEVHTSWGLK 552
S G V IRF DNPG WF+HCH++ H G
Sbjct: 428 GSPGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFA 461
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 146/536 (27%), Positives = 216/536 (40%), Gaps = 104/536 (19%)
Query: 48 KTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNI-----SIHWHGIRQLRSGWADGPAY 102
+ + VN FP P I GD + +VN + ++ SIHWHG Q + WADGPA+
Sbjct: 22 RAAIVVNNVFPAPLITGNMGDNFQLNLVNQMTNHTMLKTTSIHWHGFFQKGTNWADGPAF 81
Query: 103 ITQCPIQTGQSYIYNFTIVGQRGTLWWHAHIS-WLRSTLYGPIIILPKRGIPYPFAKPY- 160
I QCPI +G S++Y+F + GQ GT W+H+H+S L GP ++ P A Y
Sbjct: 82 INQCPIASGNSFLYDFQVPGQAGTFWYHSHLSTQYCDGLRGPFVVYDPND---PHANLYD 138
Query: 161 ---KEVPIVFGEWFKSDTEAIINQALQTGGG-PNVSDAYTFNGLPGPLYNCSAKDTFKLK 216
+ I +W+ A + G P +D+ NGL G + D +
Sbjct: 139 VDDESTVITLADWYHV--------AAKLGPRFPKGADSTLINGL-GRSTSTPTADLAVIS 189
Query: 217 VKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTNVLLE 276
V GK Y RLV+ + + + FSI +H LTV+E D V +P +++ I Q + +L
Sbjct: 190 VTKGKRYRFRLVSLSCDPNYTFSIDSHQLTVIEADGVSTQPVTVDSIQIFAAQRYSFVLN 249
Query: 277 TKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSXXXXXXXXXXXXX 336
+ +++ A P G F + + IL Y+
Sbjct: 250 ANQDVDN--YWIRANPNF-GTTGFADGVNSAILRYDD----------------ADPVEPV 290
Query: 337 XNDTNFVTNFVNKLRSLGSAQFPANVPQ-----NVDKRFFFTVGLGTSPCPRNQTCQGPN 391
N T L L S P N Q N++ F F +
Sbjct: 291 TNQTGTTLLLETDLHPLTSMPVPGNPTQGGADLNLNMAFNF------------------D 332
Query: 392 GTMFEASINNISFVMPTTALLQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSG 451
GT F IN SF PT +L +G + ++ SG
Sbjct: 333 GTNF--FINGESFTPPTVPVLLQIISGANTA----------------------QDLLPSG 368
Query: 452 TKLVVLPFNTSVELIMQDTSILGAENHPLHLHXXXXXXXXXXXXXXDPNKDPAKFNLVDP 511
+ + LP N+S+E+ T+ HP HLH +N DP
Sbjct: 369 S-VYSLPSNSSIEITFPATTAAPGAPHPFHLHGHVFAVVRSAGS--------TSYNYDDP 419
Query: 512 IERNTV--GVP-SGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVLDGKLPN 564
+ R+ V G P +G V IRF DNPG WF+HCH++ H G +V+ +PN
Sbjct: 420 VWRDVVSTGTPQAGDNVTIRFQTDNPGPWFLHCHIDFHLDAGFA---VVMAEDIPN 472
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 140/528 (26%), Positives = 217/528 (41%), Gaps = 86/528 (16%)
Query: 47 TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHV-----QHNISIHWHGIRQLRSGWADGPA 101
++ V+ G P I DR I V++ + + SIHWHG Q + DGPA
Sbjct: 42 ARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPA 101
Query: 102 YITQCPIQTGQSYIYNFTIVGQRGTLWWHAHIS-WLRSTLYGPIIIL-PKRGIPYPFAKP 159
++ QCPI +S++Y+F + GQ GT W+H+H+S L G ++ P +
Sbjct: 102 FVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVD 161
Query: 160 YKEVPIVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKS 219
I +W+ S + + + D NGL N SA + V+S
Sbjct: 162 DASTVITIADWYHSLSTVLFPNPNKAP---PAPDTTLINGLGRNSANPSAGQLAVVSVQS 218
Query: 220 GKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTNVLLETKP 279
GK Y R+V+++ + FSI H +TV+EVD V +P ++L I GQ +V++E
Sbjct: 219 GKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEA-- 276
Query: 280 HYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSXXXXXXXXXXXXXXND 339
+ +++ A P G F + I Y+ G + N+
Sbjct: 277 NQAVGNYWIRANPS-NGRNGFTGGINSAIFRYQ--------GAAVAEPTTSQNSGTALNE 327
Query: 340 TNFVTNFVNKLRSLGSAQFPANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEASI 399
N + L + G+ P VP D +G N T + +I
Sbjct: 328 ANLI-----PLINPGAPGNP--VPGGADINLNLRIGR--------------NATTADFTI 366
Query: 400 NNISFVMPTTALLQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVVLPF 459
N F+ PT +L +G +N PN+ + G ++ LP
Sbjct: 367 NGAPFIPPTVPVLLQILSGVTN---------------------PNDLL--PGGAVISLPA 403
Query: 460 NTSVELIMQDTSILGAENHPLHLHXXXXXXXXXXXXXXDPNKDPAK--FNLVDPIERNTV 517
N +E+ SI G NHP HLH D + P +N V+P+ R+ V
Sbjct: 404 NQVIEI-----SIPGGGNHPFHLH----------GHNFDVVRTPGSSVYNYVNPVRRDVV 448
Query: 518 GVPSGGW-VAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVLDGKLPN 564
+ GG V RF+ DNPG WF+HCH++ H GL +V +PN
Sbjct: 449 SIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLA---VVFAEDIPN 493
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 147/538 (27%), Positives = 221/538 (41%), Gaps = 95/538 (17%)
Query: 47 TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNI-----SIHWHGIRQLRSGWADGPA 101
+ V VNG P P I +GDR + V++ + ++ SIHWHG Q + WADGPA
Sbjct: 21 AREAVVVNGITPAPLITGNKGDRFQLNVIDQLTNHTMLKTSSIHWHGFFQQGTNWADGPA 80
Query: 102 YITQCPIQTGQSYIYNFTIVGQRGTLWWHAHIS-WLRSTLYGPIIILPKRGIPYPFAKPY 160
++ QCPI +G S++Y+F + Q GT W+H+H+S L GP ++ P A Y
Sbjct: 81 FVNQCPIASGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPND---PHASLY 137
Query: 161 ----KEVPIVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLK 216
+ I +W+ A + G SD+ NGL G + D +K
Sbjct: 138 DIDNDDTVITLADWYH--VAAKLGPRFPFG-----SDSTLINGL-GRTTGIAPSDLAVIK 189
Query: 217 VKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTNVLLE 276
V GK Y RLV+ + + + FSI NHT+T++E D++ +P E +++ I Q + +L+
Sbjct: 190 VTQGKRYRFRLVSLSCDPNHTFSIDNHTMTIIEADSINTQPLEVDSIQIFAAQRYSFVLD 249
Query: 277 TKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSXXXXXXXXXXXXX 336
P +++ A P G F + IL Y+
Sbjct: 250 AS--QPVDNYWIRANPAFGNTG-FAGGINSAILRYD-------GAPEIEPTSVQTTPTKP 299
Query: 337 XNDTNFVTNFVNKLRSLGSAQFPAN-VPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMF 395
N+ + L L P + P VDK NGT F
Sbjct: 300 LNEVD--------LHPLSPMPVPGSPEPGGVDKPLNLVFNF--------------NGTNF 337
Query: 396 EASINNISFVMPTT-ALLQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKL 454
IN+ +FV P+ LLQ Q+ VP+ G+
Sbjct: 338 --FINDHTFVPPSVPVLLQILSGAQAAQDLVPE-----------------------GSVF 372
Query: 455 VVLPFNTSVELIMQDTSILGAENHPLHLHXXXXXXXXXXXXXXDPNKDPAKFNLVDPIER 514
V+ P N+S+E+ T+ HP HLH + +N +PI R
Sbjct: 373 VL-PSNSSIEISFPATANAPGFPHPFHLHGHAFAVVRSAGS--------SVYNYDNPIFR 423
Query: 515 NTV--GVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVLDGKLPNQKLLPP 570
+ V G P G V IRF +NPG WF+HCH++ H G +V+ P+ K P
Sbjct: 424 DVVSTGQP-GDNVTIRFETNNPGPWFLHCHIDFHLDAGFA---VVMAEDTPDTKAANP 477
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 147/537 (27%), Positives = 221/537 (41%), Gaps = 91/537 (16%)
Query: 47 TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQH-----NISIHWHGIRQLRSGWADGPA 101
++ V VNG PGP + GDR + V++++ + + SIHWHG Q + WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 102 YITQCPIQTGQSYIYNFTIVGQRGTLWWHAHIS-WLRSTLYGPIIILPKRGIPYPFAKPY 160
+I QCPI G S++Y+F + Q GT W+H+H+S L GP ++ P A Y
Sbjct: 81 FINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPND---PHASRY 137
Query: 161 ----KEVPIVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLK 216
+ I +W+ T A + P +DA NG G + S + +K
Sbjct: 138 DVDNDDTVITLADWYH--TAAKLGPRF-----PGGADATLING-KGRAPSDSVAELSVIK 189
Query: 217 VKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTNVLLE 276
V GK Y RLV+ + N + FSI H LT++EVD+V +P E +++ I Q + +L+
Sbjct: 190 VTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLD 249
Query: 277 TKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSXXXXXXXXXXXXX 336
+ +++ A P +G FD + IL Y+ + N
Sbjct: 250 ANQAVDN--YWIRANPNFGNVG-FDGGINSAILRYDGAPAVEPTTNQTTSVKPLNEVDLH 306
Query: 337 XNDTNFVTNFVNKLRSLGSAQFPANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFE 396
V+ V S G N+ N + FF
Sbjct: 307 P----LVSTPVPGAPSSGGVDKAINMAFNFNGSNFF------------------------ 338
Query: 397 ASINNISFVMPTTALLQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVV 456
IN SFV PT +L +G ++ SG+ + V
Sbjct: 339 --INGASFVPPTVPVLLQILSGAQTA----------------------QDLLPSGS-VYV 373
Query: 457 LPFNTSVELIMQDTSILGAENHPLHLHXXXXXXXXXXXXXXDPNKDPAKFNLVDPIERNT 516
LP N S+E+ T+ HP HLH +N +PI R+
Sbjct: 374 LPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAGSTV--------YNYDNPIFRDV 425
Query: 517 V--GVPSGGW-VAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVLDGKLPNQKLLPP 570
V G P+ G V IRF +NPG WF+HCH++ H G +V+ P+ K + P
Sbjct: 426 VSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFA---VVMAEDTPDVKAVNP 479
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 153/540 (28%), Positives = 226/540 (41%), Gaps = 97/540 (17%)
Query: 47 TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQH-----NISIHWHGIRQLRSGWADGPA 101
++ V VNG PGP + GDR + V++++ + + SIHWHG Q + WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 102 YITQCPIQTGQSYIYNFTIVGQRGTLWWHAHIS-WLRSTLYGPIIILPKRGIPYPFAKPY 160
+I QCPI G S++Y+F + Q GT W+H+H+S L GP ++ P A Y
Sbjct: 81 FINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPND---PHASRY 137
Query: 161 ----KEVPIVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLK 216
+ I +W+ T A + P +DA NG G + S + +K
Sbjct: 138 DVDNDDTVITLADWYH--TAAKLGPRF-----PGGADATLING-KGRAPSDSVAELSVIK 189
Query: 217 VKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTNVLLE 276
V GK Y RLV+ + N + FSI H LT++EVD+V +P E +++ I Q + +L+
Sbjct: 190 VTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLD 249
Query: 277 TKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSXXXXXXXXXXXXX 336
+ +++ A P +G FD + IL Y+
Sbjct: 250 ANQAVDN--YWIRANPNFGNVG-FDGGINSAILRYDG----------------APAVEPT 290
Query: 337 XNDTNFVT--NFVNKLRSLGSAQFPANVPQ-NVDKRFFFTVGLGTSPCPRNQTCQGPNGT 393
N T V N V+ L L S P + VDK NG+
Sbjct: 291 TNQTTSVKPLNEVD-LHPLVSTPVPGSPSSGGVDKAINMAFNF--------------NGS 335
Query: 394 MFEASINNISFVMPTTALLQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTK 453
F IN SFV PT +L +G ++ SG+
Sbjct: 336 NF--FINGASFVPPTVPVLLQILSGAQTA----------------------QDLLPSGS- 370
Query: 454 LVVLPFNTSVELIMQDTSILGAENHPLHLHXXXXXXXXXXXXXXDPNKDPAKFNLVDPIE 513
+ VLP N S+E+ T+ HP HLH +N +PI
Sbjct: 371 VYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAGSTV--------YNYDNPIF 422
Query: 514 RNTV--GVPSGGW-VAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVLDGKLPNQKLLPP 570
R+ V G P+ G V IRF +NPG WF+HCH++ H G +V+ P+ K + P
Sbjct: 423 RDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFA---VVMAEDTPDVKAVNP 479
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 142/534 (26%), Positives = 213/534 (39%), Gaps = 88/534 (16%)
Query: 48 KTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQH-----NISIHWHGIRQLRSGWADGPAY 102
+ V+ G FPGP I GD I N + + SIHWHG Q + WADGPA+
Sbjct: 23 RPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAF 82
Query: 103 ITQCPIQTGQSYIYNFTIVGQRGTLWWHAHI-SWLRSTLYGPIIILPKRGIPYPFAKPY- 160
ITQCPI G S+ YNF + G GT W+H+H+ + L GP ++ P A Y
Sbjct: 83 ITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPND---PDANLYD 139
Query: 161 ---KEVPIVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKV 217
I +W+ ++ + + GG +D+ +GL N +A + V
Sbjct: 140 VDDDTTIITLADWYH-----VLAKEMGAGGAI-TADSTLIDGLGRTHVNVAAVPLSVITV 193
Query: 218 KSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTNVLLET 277
+ GK Y +RLV+ + + + FSI H +T++E D V + + + I Q + +L
Sbjct: 194 EVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNA 253
Query: 278 KPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSXXXXXXXXXXXXXX 337
P +++ A P G G FD + IL Y+ + +
Sbjct: 254 N--QPVGNYWIRANPNSGGEG-FDGGINSAILRYDGAT----TADPVTVASTVHTKCLIE 306
Query: 338 NDTNFVTNFVNKLRSLGSAQFPANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEA 397
D L L P N Q G + C N + G
Sbjct: 307 TD----------LHPLSRNGVPGNPHQ------------GGADCNLNLSLGFACGNFV-- 342
Query: 398 SINNISFVMPTTALLQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVVL 457
IN +SF PT +L +G + + L+P SG+ ++ L
Sbjct: 343 -INGVSFTPPTVPVLLQICSGANT--------AADLLP--------------SGS-VISL 378
Query: 458 PFNTSVELIMQDTSILGAENHPLHLHXXXXXXXXXXXXXXDPNKDPAKFNLVDPIERNTV 517
P N+++E+ + + G HP HLH + N DPI R+ V
Sbjct: 379 PSNSTIEIALPAGAAGGP--HPFHLHGHDFAVSESASN--------STSNYDDPIWRDVV 428
Query: 518 GVPS-GGWVAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVLDGKLPNQKLLPP 570
+ G V IRF DNPG WF+HCH++ H G +V +PN P
Sbjct: 429 SIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFA---IVFAEDIPNTASANP 479
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 143/538 (26%), Positives = 220/538 (40%), Gaps = 93/538 (17%)
Query: 47 TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNI-----SIHWHGIRQLRSGWADGPA 101
++ V VNG PGP + GDR + V++++ ++ S+HWHG Q + WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFFQQGTNWADGPA 80
Query: 102 YITQCPIQTGQSYIYNFTIVGQRGTLWWHAHIS-WLRSTLYGPIIILPKRGIPYPFAKPY 160
+I QCPI G S++Y+F + Q GT W+H+H+S L GP ++ P A Y
Sbjct: 81 FINQCPISPGHSFLYDFQVPNQAGTFWYHSHLSTQYCDGLRGPFVVYDPND---PHASRY 137
Query: 161 ----KEVPIVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLK 216
+ I +W+ T A + A PN +D+ NG + SA+ + +
Sbjct: 138 DVDNDDTTITLADWYH--TAAKLGPAF-----PNGADSTLINGKGRAPSDSSAQLSV-VS 189
Query: 217 VKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTNVLLE 276
V GK RLV+ + + + FSI H T++E D+V +P T+++ I Q + L
Sbjct: 190 VTKGKRXRFRLVSLSCDPNFTFSIDGHNNTIIETDSVNSQPLNTDSIQIFAAQRYSFTLN 249
Query: 277 TKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSXXXXXXXXXXXXX 336
+ +++ A P +G F+ + IL Y+ +
Sbjct: 250 ANQAVDN--YWIRANPNFGNVG-FNGGINSAILRYD-------GAPAVEPTTNQSTSTQP 299
Query: 337 XNDTNFVTNFVNKLRSLGSAQFPAN-VPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMF 395
N+TN L L S P + VDK NG+ F
Sbjct: 300 LNETN--------LHPLVSTPVPGSPAAGGVDKAINMAFNF--------------NGSNF 337
Query: 396 EASINNISFVMPTTALLQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLV 455
IN SF P+ +L +G ++ SG+ +
Sbjct: 338 --FINGASFTPPSVPVLLQILSGAQTA----------------------QDLLPSGS-VX 372
Query: 456 VLPFNTSVELIMQDTSILGAENHPLHLHXXXXXXXXXXXXXXDPNKDPAKFNLVDPIERN 515
LP N S+E+ T+ HP HLH +N +PI R+
Sbjct: 373 TLPSNASIEISFPATAAAPGAPHPFHLHGHVFAVVRSAGSTV--------YNYSNPIFRD 424
Query: 516 TV--GVPSGGW-VAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVLDGKLPNQKLLPP 570
V G P+ G V IRFL +NPG WF+HCH++ H G +V +P+ K P
Sbjct: 425 VVSTGTPAAGDNVTIRFLTNNPGPWFLHCHIDFHLEGGFA---VVQAEDVPDVKATNP 479
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 150/540 (27%), Positives = 223/540 (41%), Gaps = 97/540 (17%)
Query: 47 TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNI-----SIHWHGIRQLRSGWADGPA 101
++ V VNG PGP + GDR + V++++ ++ S+HWHG Q + WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFFQQGTNWADGPA 80
Query: 102 YITQCPIQTGQSYIYNFTIVGQRGTLWWHAHIS-WLRSTLYGPIIILPKRGIPYPFAKPY 160
+I QCPI G S++Y+F + Q GT W+H+H+S L GP ++ P A Y
Sbjct: 81 FINQCPISPGHSFLYDFQVPNQAGTFWYHSHLSTQYCDGLRGPFVVYDPND---PHASRY 137
Query: 161 ----KEVPIVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLK 216
+ I +W+ T A + G +DA NG + SA+ + +K
Sbjct: 138 DVDNDDTVITLADWYH--TAAKLGPRFPAG-----ADATLINGKGRAPSDTSAELSV-IK 189
Query: 217 VKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTNVLLE 276
V GK RLV+ + + + FSI H LT++EVD+ +P +++ I Q + +L
Sbjct: 190 VTKGKRXRFRLVSLSCDPNFTFSIDGHNLTIIEVDSSNSQPLSVDSIQIFAAQRYSFVLN 249
Query: 277 TKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSXXXXXXXXXXXXX 336
+ +++ A P +G F+ + IL Y+
Sbjct: 250 ANQAVDN--YWIRANPNFGNVG-FNGGINSAILRYDG----------------APAVEPT 290
Query: 337 XNDTNFVT--NFVNKLRSLGSAQFPANVPQ-NVDKRFFFTVGLGTSPCPRNQTCQGPNGT 393
N T V N VN L L S P + VDK NG+
Sbjct: 291 TNQTTSVKPLNEVN-LHPLVSTPVPGSPSSGGVDKAINMAFNF--------------NGS 335
Query: 394 MFEASINNISFVMPTTALLQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTK 453
F IN SFV P+ +L +G L+P SG+
Sbjct: 336 NF--FINGASFVPPSVPVLLQILSGAQTA--------QDLLP--------------SGSV 371
Query: 454 LVVLPFNTSVELIMQDTSILGAENHPLHLHXXXXXXXXXXXXXXDPNKDPAKFNLVDPIE 513
V LP N S+E+ T+ HP HLH +N +PI
Sbjct: 372 XV-LPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAGSTV--------YNYSNPIF 422
Query: 514 RNTV--GVPSGGW-VAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVLDGKLPNQKLLPP 570
R+ V G P+ G V IRFL +NPG WF+HCH++ H G +V +P+ K P
Sbjct: 423 RDVVSTGTPAAGDNVTIRFLTNNPGPWFLHCHIDFHLEGGFA---VVQAEDVPDVKATNP 479
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 137/525 (26%), Positives = 208/525 (39%), Gaps = 94/525 (17%)
Query: 47 TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQH-----NISIHWHGIRQLRSGWADGPA 101
++ V VNG PGP I GDR + V++++ + + SIHWHG Q + WADGPA
Sbjct: 21 SRQAVVVNGGTPGPLITGNMGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQKGTNWADGPA 80
Query: 102 YITQCPIQTGQSYIYNFTIVGQRGTLWWHAHIS-WLRSTLYGPIIILPKRGIPYPFAKPY 160
+I QCPI +G S++Y+F + Q GT W+H+H+S L GP ++ P A Y
Sbjct: 81 FINQCPISSGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPND---PAADLY 137
Query: 161 ----KEVPIVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLK 216
+ I +W+ A + A G +DA NG G + + D +
Sbjct: 138 DVDNDDTVITLVDWYH--VAAKLGPAFPLG-----ADATLING-KGRSPSTTTADLSVIS 189
Query: 217 VKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTNVLLE 276
V GK Y RLV+ + + + FSI H +T++E D++ P +++ I Q + +LE
Sbjct: 190 VTPGKRYRFRLVSLSCDPNYTFSIDGHNMTIIETDSINTAPLVVDSIQIFAAQRYSFVLE 249
Query: 277 TKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSXXXXXXXXXXXXX 336
+ +++ A P +G F + IL Y+ +
Sbjct: 250 ANQAVDN--YWIRANPNFGNVG-FTGGINSAILRYD-------GAAAVEPTTTQTTSTAP 299
Query: 337 XNDTN---FVTNFVNKLRSLGSAQFPANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGT 393
N+ N V V G N+ N + FF
Sbjct: 300 LNEVNLHPLVATAVPGSPVAGGVDLAINMAFNFNGTNFF--------------------- 338
Query: 394 MFEASINNISFVMPTTALLQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTK 453
IN SF PT +L +G N ++ SG+
Sbjct: 339 -----INGASFTPPTVPVLLQIISGAQNA----------------------QDLLPSGS- 370
Query: 454 LVVLPFNTSVELIMQDTSILGAENHPLHLHXXXXXXXXXXXXXXDPNKDPAKFNLVDPIE 513
+ LP N +E+ T+ HP HLH +N +PI
Sbjct: 371 VYSLPSNADIEISFPATAAAPGAPHPFHLHGHAFAVVRSAGSTV--------YNYDNPIF 422
Query: 514 RNTV--GVPSGGW-VAIRFLADNPGVWFMHCHLEVHTSWGLKTAW 555
R+ V G P+ G V IRF DNPG WF+HCH++ H G +
Sbjct: 423 RDVVSTGTPAAGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVF 467
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 147/526 (27%), Positives = 213/526 (40%), Gaps = 92/526 (17%)
Query: 40 NVTRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNI-----SIHWHGIRQLRS 94
NV+ T+ + VNG GP I + D + VVN + + SIHWHG+ Q +
Sbjct: 15 NVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGT 73
Query: 95 GWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHI-SWLRSTLYGPIIILPKRGIP 153
WADG + QCPI G +++Y FT G GT W+H+H + L GP++I
Sbjct: 74 NWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDND-- 131
Query: 154 YPFAKPYKE----VPIVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSA 209
P A Y E I +W+ I ++Q P DA NG G A
Sbjct: 132 -PHAALYDEDDENTIITLADWYH-----IPAPSIQGAAQP---DATLING-KGRYVGGPA 181
Query: 210 KDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQ 269
+ + V+ GK Y +RL++ + + + FSI H LT++EVD +P + L I GQ
Sbjct: 182 AELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQ 241
Query: 270 TTNVLLETKPHYPSATFFMTARPYV--TGL-GTFDNSTVAGILEYEKPLNFIHSGNSXXX 326
+ +L+ P +++ A+P GL GTF N + IL Y N
Sbjct: 242 RYSFVLDAN--QPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAAN---------- 289
Query: 327 XXXXXXXXXXXNDTNFVTNFVNKLRSLGSAQFPANVPQNVDKRFFFTVGLGTSPCPRNQT 386
N ++ L + P +V+ RF G
Sbjct: 290 --ADPTTSANPNPAQLNEADLHALIDPAAPGIPTPGAADVNLRFQLGFSGGRFTI----- 342
Query: 387 CQGPNGTMFEASINNISFVMPTTALLQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNT 446
NGT +E S +PT LLQ QS + L+P P N
Sbjct: 343 ----NGTAYE------SPSVPT--LLQIMSGAQS---------ANDLLPAGSVYELPRNQ 381
Query: 447 MVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLHXXXXXXXXXXXXXXDPNKDPAKF 506
+V +V+P +LG HP HLH + +
Sbjct: 382 VVE-----LVVP-----------AGVLGGP-HPFHLHGHAFSVVRSAGS--------STY 416
Query: 507 NLVDPIERNTVGVP-SGGWVAIRFLADNPGVWFMHCHLEVHTSWGL 551
N V+P++R+ V + +G V IRF+ DNPG WF HCH+E H GL
Sbjct: 417 NFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGL 462
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 147/526 (27%), Positives = 213/526 (40%), Gaps = 92/526 (17%)
Query: 40 NVTRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNI-----SIHWHGIRQLRS 94
NV+ T+ + VNG GP I + D + VVN + + SIHWHG+ Q +
Sbjct: 15 NVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGT 73
Query: 95 GWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHI-SWLRSTLYGPIIILPKRGIP 153
WADG + QCPI G +++Y FT G GT W+H+H + L GP++I
Sbjct: 74 NWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDND-- 131
Query: 154 YPFAKPYKE----VPIVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSA 209
P A Y E I +W+ I ++Q P DA NG G A
Sbjct: 132 -PHAALYDEDDENTIITLADWYH-----IPAPSIQGAAQP---DATLING-KGRYVGGPA 181
Query: 210 KDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQ 269
+ + V+ GK Y +RL++ + + + FSI H LT++EVD +P + L I GQ
Sbjct: 182 AELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQ 241
Query: 270 TTNVLLETKPHYPSATFFMTARPYV--TGL-GTFDNSTVAGILEYEKPLNFIHSGNSXXX 326
+ +L+ P +++ A+P GL GTF N + IL Y N
Sbjct: 242 RYSFVLDAN--QPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAAN---------- 289
Query: 327 XXXXXXXXXXXNDTNFVTNFVNKLRSLGSAQFPANVPQNVDKRFFFTVGLGTSPCPRNQT 386
N ++ L + P +V+ RF G
Sbjct: 290 --ADPTTSANPNPAQLNEADLHALIDPAAPGIPTPGAADVNLRFQLGFSGGRFTI----- 342
Query: 387 CQGPNGTMFEASINNISFVMPTTALLQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNT 446
NGT +E S +PT LLQ QS + L+P P N
Sbjct: 343 ----NGTAYE------SPSVPT--LLQIMSGAQS---------ANDLLPAGSVYELPRNQ 381
Query: 447 MVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLHXXXXXXXXXXXXXXDPNKDPAKF 506
+V +V+P +LG HP HLH + +
Sbjct: 382 VVE-----LVVP-----------AGVLGGP-HPFHLHGHAFSVVRSAGS--------STY 416
Query: 507 NLVDPIERNTVGVP-SGGWVAIRFLADNPGVWFMHCHLEVHTSWGL 551
N V+P++R+ V + +G V IRF+ DNPG WF HCH+E H GL
Sbjct: 417 NFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGL 462
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 149/299 (49%), Gaps = 24/299 (8%)
Query: 27 AITRHYKFNVELKNVTRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHN-ISIH 85
+TR Y +VE +T +T++ ++ NG PGP I+A GD L+I V N+++HN SIH
Sbjct: 65 GVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIH 124
Query: 86 WHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHISWLRST-LYGPI 144
WHGIRQL S DG +TQCPI G + Y F + Q GT W+H+H S L+GP+
Sbjct: 125 WHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFGPL 183
Query: 145 IILPKRGIPYPFAKPYKEVPIVF-GEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGP 203
II Y ++V ++F +W I + A G P + NG
Sbjct: 184 IINGPATADYD-----EDVGVIFLQDWAHESVFEIWDTARL--GAPPALENTLMNGTN-- 234
Query: 204 LYNCSAK---------DTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVY 254
++CSA F+L G Y LRL+N ++ F+I NHTLTV+ D V
Sbjct: 235 TFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVP 294
Query: 255 VKPFETETLVITPGQTTNVLLETKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEK 313
+ P+ T+TL+I GQ +V++E + +++ T + + GIL Y+
Sbjct: 295 IVPYTTDTLLIGIGQRYDVIVEANA--AADNYWIRGNWGTTCSTNNEAANATGILRYDS 351
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 463 VELIMQDTSILGAENHPLHLHXXXXXXXXXXXXXXDPNKDPAKFNLVDPIERNTVGVPSG 522
V +++D + G HP+HLH + ++ PAKFNLV+P R+ +P
Sbjct: 449 VVYVIEDLTGFGIW-HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGN 507
Query: 523 GWVAIRFLADNPGVWFMHCHLEVHTSWGLK 552
G++AI F DNPG W +HCH+ H S G+
Sbjct: 508 GYLAIAFKLDNPGSWLLHCHIAWHASEGMA 537
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 149/299 (49%), Gaps = 24/299 (8%)
Query: 27 AITRHYKFNVELKNVTRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHN-ISIH 85
+TR Y +VE +T +T++ ++ NG PGP I+A GD L+I V N+++HN SIH
Sbjct: 65 GVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIH 124
Query: 86 WHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHISWLRST-LYGPI 144
WHGIRQL S DG +TQCPI G + Y F + Q GT W+H+H S L+GP+
Sbjct: 125 WHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFGPL 183
Query: 145 IILPKRGIPYPFAKPYKEVPIVF-GEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGP 203
II Y ++V ++F +W I + A G P + NG
Sbjct: 184 IINGPATADYD-----EDVGVIFLQDWAHESVFEIWDTARL--GAPPALENTLMNGTN-- 234
Query: 204 LYNCSAK---------DTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVY 254
++CSA F+L G Y LRL+N ++ F+I NHTLTV+ D V
Sbjct: 235 TFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVP 294
Query: 255 VKPFETETLVITPGQTTNVLLETKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEK 313
+ P+ T+TL+I GQ +V++E + +++ T + + GIL Y+
Sbjct: 295 IVPYTTDTLLIGIGQRYDVIVEANA--AADNYWIRGNWGTTCSTNNEAANATGILRYDS 351
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 463 VELIMQDTSILGAENHPLHLHXXXXXXXXXXXXXXDPNKDPAKFNLVDPIERNTVGVPSG 522
V +++D + G HP+HLH + ++ PAKFNLV+P R+ +P
Sbjct: 449 VVYVIEDLTGFGIW-HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGN 507
Query: 523 GWVAIRFLADNPGVWFMHCHLEVHTSWGLK 552
G++AI F DNPG W +HCH+ H S GL
Sbjct: 508 GYLAIAFKLDNPGSWLLHCHIAWHASEGLA 537
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 139/283 (49%), Gaps = 36/283 (12%)
Query: 46 HTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQH-----NISIHWHGIRQLRSGWADGP 100
H++ V VNG PGP I +GD+ + V+N++ + + S+HWHG Q + WADGP
Sbjct: 20 HSRDAVVVNGGTPGPLITGNKGDQFQLNVINNLTNFTMLKSTSVHWHGFFQKGTNWADGP 79
Query: 101 AYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHISWLRSTLY-----GPIIILPKRGIPYP 155
A++ QCPI G S++Y+F+ Q GT W+H+H+ ST Y GP ++ P
Sbjct: 80 AFVNQCPIAAGSSFLYDFSTPIQAGTFWYHSHL----STQYCDGDRGPFVVYDPND---P 132
Query: 156 FAKPYK----EVPIVFGEWFKSDTEAIINQALQTG-GGPNVSDAYTFNGL-PGPLYNCSA 209
A Y I +W+ + A Q G P +DA NG GP + +
Sbjct: 133 SANLYDVDNLNTVITLTDWYHT--------AAQNGPAKPGGADATLINGQGRGP--SSPS 182
Query: 210 KDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQ 269
D + V +GK Y RLV+++ + + FSI H +T+++VD++ V+P + I Q
Sbjct: 183 ADLAVISVTAGKRYRFRLVSNSCDPNYTFSIDGHQMTIIQVDSINVQPLVVLKIQIYAAQ 242
Query: 270 TTNVLLETKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYE 312
+ +L + +++ A P +G F N + IL Y
Sbjct: 243 RYSFILNANQAVNN--YWIRANPNQGNVG-FTNGINSAILRYS 282
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 60/132 (45%), Gaps = 14/132 (10%)
Query: 424 YVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLH 483
+VP PT P++ +G +++SG + LP + ++E+ TS HP HLH
Sbjct: 344 FVP--PTVPVLSQIVSGAQSAADLLASGL-VYSLPSDANIEISFPATSAAAGGPHPFHLH 400
Query: 484 XXXXXXXXXXXXXXDPNKDPAKFNLVDPIERNTV--GVPSGGW-VAIRFLADNPGVWFMH 540
+N DPI R+TV G P+ V IRF +NPG WF+H
Sbjct: 401 GHAFAVVRSAGST--------TYNYNDPIFRDTVSTGTPAANDNVTIRFKTNNPGPWFLH 452
Query: 541 CHLEVHTSWGLK 552
CH++ H G
Sbjct: 453 CHIDFHLEAGFA 464
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 119/245 (48%), Gaps = 16/245 (6%)
Query: 37 ELKNVTRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQH-NISIHWHGIRQLRSG 95
+ +NV L ++ +++ NGQFP P I +GDR+ I + N + + N S+H+HG+ Q +
Sbjct: 12 DYRNVDGL-KSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTA 70
Query: 96 WADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHISWLRSTLYGPIIILPKRGIPYP 155
DG ++TQCPI G + +YNFT+ GT W+H+H + I+ PY
Sbjct: 71 SMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSFPYD 130
Query: 156 FAKPYKEVPIVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKL 215
+ +E+ + EW+ L T + Y G N +T L
Sbjct: 131 YD---EELSLSLSEWYHD---------LVTDLTKSFMSVYNPTGAEPIPQNLIVNNTMNL 178
Query: 216 --KVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTNV 273
+V+ TYLLR+VN +F I +H +TVVE+D + + T+ L IT Q V
Sbjct: 179 TWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTV 238
Query: 274 LLETK 278
L+ TK
Sbjct: 239 LVHTK 243
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 54/121 (44%), Gaps = 20/121 (16%)
Query: 439 TGNPPNNTMV-SSGTKLVVLPFNTSVELIM--QDTSILGAENHPLHLHXXXXXXXXXXXX 495
+G+ NN+ + S T +L + VE+++ QDT HP HLH
Sbjct: 355 SGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDTGT-----HPFHLHGHAFQTIQRDRT 409
Query: 496 XXD----------PNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEV 545
D P+ PA P+ R+T+ V IRF ADNPGVWF HCH+E
Sbjct: 410 YDDALGEVPHSFDPDNHPAFPEY--PMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEW 467
Query: 546 H 546
H
Sbjct: 468 H 468
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 133/281 (47%), Gaps = 27/281 (9%)
Query: 38 LKNVTRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHN-ISIHWHGIRQLRSGW 96
LKNV L VN + GP I A GD + + V+N+++ N S+HWHG+RQL + +
Sbjct: 94 LKNVVML--------VNDKIIGPTIRANWGDNIEVTVINNLKTNGTSMHWHGLRQLGNVF 145
Query: 97 ADGPAYITQCPIQ-TGQSYIYNFTIVGQRGTLWWHAHISWLRSTLYGPIIILPKRGIPYP 155
DG +T+CPI G Y F Q GT W+H+H S YG ++ + I P
Sbjct: 146 NDGANGVTECPIPPKGGRKTYKFRAT-QYGTSWYHSHFS----AQYGNGVVGTIQ-IDGP 199
Query: 156 FAKPYKEVPIVF---GEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDT 212
+ PY VF +++S E + Q+ G P SD FNG A
Sbjct: 200 ASLPYDIDLGVFPLMDYYYRSADELV--HFTQSNGAP-PSDNVLFNGT-ARHPETGAGQW 255
Query: 213 FKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTN 272
+ + + GK + LR++N++ ++ S+ H +TV+ D V V F +L + GQ +
Sbjct: 256 YNVTLTPGKRHRLRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYD 315
Query: 273 VLLETKPHYPSATFFMTARPYVTGL-GTFDNSTVAGILEYE 312
V ++ + F +T + GL G+ +N A I Y+
Sbjct: 316 VTIDANSPVGNYWFNVT---FGDGLCGSSNNKFPAAIFRYQ 353
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 478 HPLHLHXXXXXX---------XXXXXXXXDPNKDPAKFNLVDPIERNTVGVPSGGWVAIR 528
HP+HLH DP KD + +P+ R+ +P+GGW+ +
Sbjct: 472 HPMHLHGHDFLVLGRSPDELPSAGVRHIFDPAKDLPRLKGNNPVRRDVTMLPAGGWLLLA 531
Query: 529 FLADNPGVWFMHCHLEVHTSWGLKTAWLVLDGKLPNQ 565
F DNPG W HCH+ H S GL +L L Q
Sbjct: 532 FKTDNPGAWLFHCHIAWHVSGGLSVDFLERPNDLRTQ 568
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 123/261 (47%), Gaps = 20/261 (7%)
Query: 27 AITRHYKFNV-ELKNV---TRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNH-VQHN 81
+T+ Y FN+ E+ N + K ++ +NG GP IVA GD + + V+N+ V +
Sbjct: 31 GVTQSYVFNLTEVDNWMGPDGVVKEKVML-INGNIMGPNIVANWGDTVEVTVINNLVTNG 89
Query: 82 ISIHWHGIRQLRSGWADGPAYITQCPIQ-TGQSYIYNFTIVGQRGTLWWHAHISWLRSTL 140
SIHWHGI Q + DG +T+CPI G Y + Q GT W+H+H S
Sbjct: 90 TSIHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTYRWR-ARQYGTSWYHSHFS----AQ 144
Query: 141 YGPIIILPKRGIPYPFAKPYKEVPIVF--GEWFKSDTEAIINQALQTGGGPNVSDAYTFN 198
YG ++ + I P + PY VF +++ + +++ P SD N
Sbjct: 145 YGNGVVGTIQ-INGPASLPYDIDLGVFPITDYYYRAADDLVH--FTQNNAPPFSDNVLIN 201
Query: 199 GLP-GPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKP 257
G P N + + GK + LR++N++ + S+ NHT+TV+ D V V
Sbjct: 202 GTAVNP--NTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNA 259
Query: 258 FETETLVITPGQTTNVLLETK 278
++L + GQ +V+++
Sbjct: 260 MTVDSLFLAVGQRYDVVIDAS 280
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 478 HPLHLH---------XXXXXXXXXXXXXXDPNKDPAKFNLVDPIERNTVGVPSGGWVAIR 528
HP+HLH DP D A+ N +P R+T +P+GGW+ +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 529 FLADNPGVWFMHCHLEVHTSWGLKTAWL 556
F DNPG W HCH+ H S GL +L
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDFL 518
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 123/261 (47%), Gaps = 20/261 (7%)
Query: 27 AITRHYKFNV-ELKNV---TRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNH-VQHN 81
+T+ Y FN+ E+ N + K ++ +NG GP IVA GD + + V+N+ V +
Sbjct: 31 GVTQSYVFNLTEVDNWMGPDGVVKEKVML-INGNIMGPNIVANWGDTVEVTVINNLVTNG 89
Query: 82 ISIHWHGIRQLRSGWADGPAYITQCPIQ-TGQSYIYNFTIVGQRGTLWWHAHISWLRSTL 140
SIHWHGI Q + DG +T+CPI G Y + Q GT W+H+H S
Sbjct: 90 TSIHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTYRWR-ARQYGTSWYHSHFS----AQ 144
Query: 141 YGPIIILPKRGIPYPFAKPYKEVPIVF--GEWFKSDTEAIINQALQTGGGPNVSDAYTFN 198
YG ++ + I P + PY VF +++ + +++ P SD N
Sbjct: 145 YGNGVVGTIQ-INGPASLPYDIDLGVFPITDYYYRAADDLVH--FTQNNAPPFSDNVLIN 201
Query: 199 GLP-GPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKP 257
G P N + + GK + LR++N++ + S+ NHT+TV+ D V V
Sbjct: 202 GTAVNP--NTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNA 259
Query: 258 FETETLVITPGQTTNVLLETK 278
++L + GQ +V+++
Sbjct: 260 MTVDSLFLAVGQRYDVVIDAS 280
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 478 HPLHLH---------XXXXXXXXXXXXXXDPNKDPAKFNLVDPIERNTVGVPSGGWVAIR 528
HP+HLH DP D A+ N +P R+T +P+GGW+ +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 529 FLADNPGVWFMHCHLEVHTSWGLKTAWL 556
F DNPG W HCH+ H S GL +L
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDFL 518
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 123/261 (47%), Gaps = 20/261 (7%)
Query: 27 AITRHYKFNV-ELKNV---TRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNH-VQHN 81
+T+ Y FN+ E+ N + K ++ +NG GP IVA GD + + V+N+ V +
Sbjct: 31 GVTQSYVFNLTEVDNWMGPDGVVKEKVML-INGNIMGPNIVANWGDTVEVTVINNLVTNG 89
Query: 82 ISIHWHGIRQLRSGWADGPAYITQCPIQ-TGQSYIYNFTIVGQRGTLWWHAHISWLRSTL 140
SIHWHGI Q + DG +T+CPI G Y + Q GT W+H+H S
Sbjct: 90 TSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWR-ARQYGTSWYHSHFS----AQ 144
Query: 141 YGPIIILPKRGIPYPFAKPYKEVPIVF--GEWFKSDTEAIINQALQTGGGPNVSDAYTFN 198
YG ++ + I P + PY VF +++ + +++ P SD N
Sbjct: 145 YGNGVVGTIQ-INGPASLPYDIDLGVFPITDYYYRAADDLVH--FTQNNAPPFSDNVLIN 201
Query: 199 GLP-GPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKP 257
G P N + + GK + LR++N++ + S+ NHT+TV+ D V V
Sbjct: 202 GTAVNP--NTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNA 259
Query: 258 FETETLVITPGQTTNVLLETK 278
++L + GQ +V+++
Sbjct: 260 MTVDSLFLAVGQRYDVVIDAS 280
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 478 HPLHLH---------XXXXXXXXXXXXXXDPNKDPAKFNLVDPIERNTVGVPSGGWVAIR 528
HP+HLH DP D A+ N +P R+T +P+GGW+ +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 529 FLADNPGVWFMHCHLEVHTSWGLKTAWL 556
F DNPG W HCH+ H S GL +L
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDFL 518
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|B Chain B, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|C Chain C, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|D Chain D, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|E Chain E, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|F Chain F, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
Length = 318
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 116/255 (45%), Gaps = 26/255 (10%)
Query: 30 RHYKFNVELKNVT----RLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIH 85
R + ++E + R HT + NGQ P P I EGD + + V N +IH
Sbjct: 3 REFDLSIEDTRIVLVGKRDFHT---FAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIH 59
Query: 86 WHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHISWLRST----LY 141
WHG+ Q + +DG + TQ I+ G ++ Y F GT+W+H H++ ++
Sbjct: 60 WHGMLQRGTWQSDGVPHATQHAIEPGDTFTYKFK-AEPAGTMWYHCHVNVNEHVTMRGMW 118
Query: 142 GPIIILPKRGIPYPFAKPY-KEVPIVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGL 200
GP+I+ PK P P K K+ ++ +W S N+ + G +V D YT N
Sbjct: 119 GPLIVEPKN--PLPIEKTVTKDYILMLSDWVSS----WANKPGEGGIPGDVFDYYTINAK 172
Query: 201 PGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFET 260
P +T ++VK G LRL+ + + + + + + KP +
Sbjct: 173 SFP-------ETQPIRVKKGDVIRLRLIGAGDHVHAIHTHGHISQIAFKDGFPLDKPIKG 225
Query: 261 ETLVITPGQTTNVLL 275
+T++I PG+ +V+L
Sbjct: 226 DTVLIGPGERYDVIL 240
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 506 FNLVDPIERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLK 552
F L PI+ +TV + G + DNPG+W +H H++ HT+ G K
Sbjct: 217 FPLDKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDK 263
>pdb|3GDC|A Chain A, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|B Chain B, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|C Chain C, Crystal Structure Of Multicopper Oxidase
Length = 288
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 99/252 (39%), Gaps = 35/252 (13%)
Query: 52 SVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTG 111
S NG+ PGP + AREGD L I N H +IH+HG+ + DG I I G
Sbjct: 58 SYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHRAT---MDGTPGIGAGSIAPG 114
Query: 112 QSYIYNFTIVGQRGTLWWHAHIS----WLRSTLYGPIIILPKRGIPYPFAKPYKEVPIVF 167
QS+ Y F GT +H H S + LYG I+ PK G P
Sbjct: 115 QSFTYEFDAT-PFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRPP------------- 160
Query: 168 GEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRL 227
D ++ T GG + ++ Y+ NGLP + F +KVK + + L
Sbjct: 161 ----ADDEMVMVMNGYNTDGGDD-NEFYSVNGLPFHFMD------FPVKVKQHELVRIHL 209
Query: 228 VNSALNDDL-FFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTNVLLETKPHYPSATF 286
+N D + F I + + T+T+ GQ +LE + YP
Sbjct: 210 INVLEYDPINSFHIHGNFFHYYPTGTMLTPSEYTDTISQVQGQRG--ILELRFPYPGKFM 267
Query: 287 FMTARPYVTGLG 298
F + LG
Sbjct: 268 FHAHKTEFAELG 279
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 39/257 (15%)
Query: 49 TLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPI 108
TL++ G FPGP + R D + + + N + ++HWHG+ S D P I
Sbjct: 36 TLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPI--SPKVDDPF----LEI 89
Query: 109 QTGQSYIYNFTIVGQ-RGTLWWHAHIS-----WLRSTLYGPIIILPKRGIPYPFAKPYKE 162
G+S+ Y FT+ + GT W+H H+ L + L G +++
Sbjct: 90 PPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVV----------ESSLDA 139
Query: 163 VPIVFGEWFKSDTEAIINQALQTGGG---PNVSDAYTFNGLPGPLY--NCSAKDTFKLKV 217
+P E +++ ++ + L GG P+ + NG G L N + + T V
Sbjct: 140 IP----ELREAEEHLLVLKDLALQGGRPAPHTPMDW-MNGKEGDLVLVNGALRPTL---V 191
Query: 218 KSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVK-PFETETLVITPGQTTNVLLE 276
T LRL+N++ ++ +H L ++ D +++ P E L++ PG+ VL+
Sbjct: 192 AQKATLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVR 251
Query: 277 TKPHYPSATFFMTARPY 293
+ F + A PY
Sbjct: 252 LR---KEGRFLLQALPY 265
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 102/259 (39%), Gaps = 37/259 (14%)
Query: 31 HYKFNVELKNVTRLCHTKTLV-SVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGI 89
H ++ ++ + KTL + NG P P+I EGD+L I V N ++ +IHWHG+
Sbjct: 52 HATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGV 111
Query: 90 ----RQLRSGWADGPAYITQCPIQTGQSYIYNFTI-VGQRGTLWWHAHISWLRST----- 139
Q DG + PI G+ IY F I GT W+H H + S
Sbjct: 112 PVPPDQ------DGSPH---DPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMG 162
Query: 140 LYGPIIILPKRGIPYPFAKPYKEVPIVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNG 199
L G +I K+ KE ++ + + D A I PN + NG
Sbjct: 163 LAGAFVIKAKKDA----LSHLKEKDLMISD-LRLDENAQI---------PNNNLNDWLNG 208
Query: 200 LPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYV-KPF 258
G + + FK K+K +R+ N+ L I +V D + K
Sbjct: 209 REGEFVLINGQ--FKPKIKLATNERIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTI 266
Query: 259 ETETLVITPGQTTNVLLET 277
E L ++P VL++
Sbjct: 267 YKEELFLSPASRVEVLIDA 285
>pdb|3AW5|A Chain A, Structure Of A Multicopper Oxidase From The
Hyperthermophilic Archaeon Pyrobaculum Aerophilum
Length = 448
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 94/233 (40%), Gaps = 38/233 (16%)
Query: 60 PRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADG--PAYITQCPIQTGQSYIYN 117
P I+ R G R+ + + N + +HWHG W + P++ I G+SY Y+
Sbjct: 38 PTIILRRGQRVDMTLKNKLTEPTIVHWHG---FDVNWHNDAHPSF----AITPGESYNYS 90
Query: 118 FTIVGQRGTLWWHAHISWLRSTLYG----PIIILPKRGIPYPFAKPYKEVPIVFGEWFKS 173
F +V + GT +H H L + + ++I+ G F ++P+V S
Sbjct: 91 FDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSDLGFKYGVNDLPLVI-----S 145
Query: 174 DTEAIINQALQTGGGP--NVSDAYTFNGLPG--PLYNCSAKDTFKLKVKSGKTYLLRLVN 229
D I GG P N + G G L N FKL SG +Y LRLVN
Sbjct: 146 DRRFI-------GGAPVYNPTPMEMIAGFLGNAVLVNGVKDAVFKL---SGGSYRLRLVN 195
Query: 230 SALNDDLFFSIANHTLTVVEVDAVYV------KPFETETLVITPGQTTNVLLE 276
+ SI VV + + V +P E L + P + V++E
Sbjct: 196 GSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVE 248
>pdb|1KBW|A Chain A, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|B Chain B, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|C Chain C, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|D Chain D, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|E Chain E, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|F Chain F, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBV|A Chain A, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|B Chain B, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|C Chain C, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|D Chain D, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|E Chain E, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|F Chain F, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 96/231 (41%), Gaps = 40/231 (17%)
Query: 22 PESVLAITRHY--KFNVELKNVTRLCHTKTLV-----SVNGQFPGPRIVAREGDRLLIKV 74
PE AI R Y K V+++ V + V + +G PG I REGD + ++
Sbjct: 25 PEVPPAIDRDYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEF 84
Query: 75 VNH----VQHNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWH 130
N+ V HN+ H + + A P G++ ++F + Q G +H
Sbjct: 85 SNNPSSTVPHNVDFHAATGQGGGA------AATFTAP---GRTSTFSFKAL-QPGLYIYH 134
Query: 131 AHIS----WLRSTLYGPIIILPKRGIPYPFAKPYKEVPIVFGEWFKSDTEAIINQALQ-- 184
++ + + +YG I++ PK G+P K KE IV G+++ + Q LQ
Sbjct: 135 CAVAPVGMHIANGMYGLILVEPKEGLP----KVDKEFYIVQGDFYTKGKKGA--QGLQPF 188
Query: 185 --TGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALN 233
+ FNG G L +A LK K+G+T + + N N
Sbjct: 189 DMDKAVAEQPEYVVFNGHVGALTGDNA-----LKAKAGETVRMYVGNGGPN 234
>pdb|2BO0|A Chain A, Crystal Structure Of The C130a Mutant Of Nitrite Reductase
From Alcaligenes Xylosoxidans
Length = 336
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 19/118 (16%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V EGD + + +V N + HN+ H + A G A +T
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGAKLTN- 107
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWHAH----ISW-LRSTLYGPIIILPKRGIPYPFAKP 159
+ G+ F + GT +HA + W + S + G +++LP+ G+ P KP
Sbjct: 108 -VNPGEQATLRFK-ADRSGTFVYHAAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|2ZOO|A Chain A, Crystal Structure Of Nitrite Reductase From
Pseudoalteromonas Haloplanktis Tac125
Length = 442
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 92/241 (38%), Gaps = 32/241 (13%)
Query: 58 PGPRIVAREGDRLLIKVVNH----VQHNISIHWHGIRQLRSGWADGPAYITQCPIQTGQS 113
PG I REGD + + NH + HNI +H +G G P G +
Sbjct: 58 PGSFIRVREGDEIEFNLSNHPSSKMPHNIDLH------AVTGPGGGAESSFTAP---GHT 108
Query: 114 YIYNFTIVGQRGTLWWHAHIS----WLRSTLYGPIIILPKRGIPYPFAKPYKEVPIVFGE 169
+NF + G +H + + + +YG I++ PK G+ A +E +V G+
Sbjct: 109 STFNFKAL-NPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGD 163
Query: 170 WFKSDT--EAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRL 227
++ EA + +D FNG G S D L K G+T L +
Sbjct: 164 FYTKGEFGEAGLQPFDMAKAIDEDADYVVFNGSVG-----STTDENSLTAKVGETVRLYI 218
Query: 228 VNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTNVLLETKPHYPSATFF 287
N N F + V V+ +K +T +I G ++E K P TF
Sbjct: 219 GNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAA--IVEFKVEVP-GTFI 275
Query: 288 M 288
+
Sbjct: 276 L 276
>pdb|2BP0|A Chain A, M168l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V EGD + + +V N + HN+ H + A G A +T
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGAKLTN- 107
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGIPYPFAKP 159
+ G+ F + GT +H + W + S L G +++LP+ G+ P KP
Sbjct: 108 -VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGLSGTLMVLPRDGLKDPEGKP 163
>pdb|2BP0|B Chain B, M168l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V EGD + + +V N + HN+ H + A G A +T
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGAKLTN- 107
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGIPYPFAKP 159
+ G+ F + GT +H + W + S L G +++LP+ G+ P KP
Sbjct: 108 -VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGLSGTLMVLPRDGLKDPEGKP 163
>pdb|2JFC|A Chain A, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|B Chain B, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|C Chain C, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|D Chain D, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|E Chain E, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|F Chain F, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
Length = 335
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V EGD + + +V N + HN+ H + A G A +T
Sbjct: 55 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGAKLTN- 106
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGIPYPFAKP 159
+ G+ F + GT +H + W + S L G +++LP+ G+ P KP
Sbjct: 107 -VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGLSGTLMVLPRDGLKDPQGKP 162
>pdb|2XX0|A Chain A, Structure Of The N90s-H254f Mutant Of Nitrite Reductase
From Alcaligenes Xylosoxidans
pdb|2XX0|B Chain B, Structure Of The N90s-H254f Mutant Of Nitrite Reductase
From Alcaligenes Xylosoxidans
Length = 336
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 15/116 (12%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVVNHVQHNI--SIHWHGIRQLRSGWADGPAYITQCPI 108
++ NG PGP +V EGD + + +VN + + S+ +HG + A G A +T +
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHSVDFHG-----ATGALGGAKLTN--V 108
Query: 109 QTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGIPYPFAKP 159
G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 109 NPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|2XX1|A Chain A, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|B Chain B, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|C Chain C, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|D Chain D, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|E Chain E, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|F Chain F, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
Length = 336
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 15/116 (12%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVVNHVQHNI--SIHWHGIRQLRSGWADGPAYITQCPI 108
++ NG PGP +V EGD + + +VN + + S+ +HG + A G A +T +
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHSVDFHG-----ATGALGGAKLTN--V 108
Query: 109 QTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGIPYPFAKP 159
G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 109 NPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|2XXG|A Chain A, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans
pdb|2XXG|C Chain C, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans
Length = 336
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 15/116 (12%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVVNHVQHNI--SIHWHGIRQLRSGWADGPAYITQCPI 108
++ NG PGP +V EGD + + +VN + + S+ +HG + A G A +T +
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHSVDFHG-----ATGALGGAKLTN--V 108
Query: 109 QTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGIPYPFAKP 159
G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 109 NPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|2XXF|A Chain A, Cu Metallated H254f Mutant Of Nitrite Reductase
pdb|2XXF|B Chain B, Cu Metallated H254f Mutant Of Nitrite Reductase
Length = 336
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V EGD + + +V N + HN+ H + A G A +T
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGAKLTN- 107
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGIPYPFAKP 159
+ G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 108 -VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|1GS7|A Chain A, Crystal Structure Of H254f Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V EGD + + +V N + HN+ H + A G A +T
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGAKLTN- 107
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGIPYPFAKP 159
+ G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 108 -VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|2XWZ|A Chain A, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|B Chain B, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|C Chain C, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|D Chain D, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|E Chain E, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|F Chain F, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
Length = 336
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V EGD + + +V N + HN+ H + A G A +T
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGAKLTN- 107
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGIPYPFAKP 159
+ G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 108 -VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|1OE1|A Chain A, Atomic Resolution Structure Of The Wildtype Native Nitrite
Reductase From Alcaligenes Xylosoxidans
pdb|1OE3|A Chain A, Atomic Resolution Structure Of 'half Apo' Nir
Length = 336
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V EGD + + +V N + HN+ H + A G A +T
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGAKLTN- 107
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGIPYPFAKP 159
+ G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 108 -VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|2VN3|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans
Length = 337
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V EGD + + +V N + HN+ H + A G A +T
Sbjct: 57 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGAKLTN- 108
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGIPYPFAKP 159
+ G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 109 -VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 164
>pdb|1OE2|A Chain A, Atomic Resolution Structure Of D92e Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V EGD + + +V N + HN+ H + A G A +T
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVEFH-------GATGALGGAKLTN- 107
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGIPYPFAKP 159
+ G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 108 -VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|1WA1|X Chain X, Crystal Structure Of H313q Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
pdb|1WA2|X Chain X, Crystal Structure Of H313q Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase With Nitrite Bound
Length = 336
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V EGD + + +V N + HN+ H + A G A +T
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGAKLTN- 107
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGIPYPFAKP 159
+ G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 108 -VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|1GS8|A Chain A, Crystal Structure Of Mutant D92n Alcaligenes Xylosoxidans
Nitrite Reductase
Length = 336
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 19/118 (16%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V EGD + + +V N + HN++ H + A G A +T
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVNFH-------GATGALGGAKLTN- 107
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGIPYPFAKP 159
+ G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 108 -VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|1HAU|A Chain A, X-Ray Structure Of A Blue Copper Nitrite Reductase At High
Ph And In Copper Free Form At 1.9 A Resolution
pdb|1HAW|A Chain A, X-Ray Structure Of A Blue Copper Nitrite Reductase At High
Ph And In Copper Free Form At 1.9a Resolution
pdb|2VM3|A Chain A, Structure Of Alcaligenes Xylosoxidans In Space Group R3 -
1 Of 2
pdb|2VM4|A Chain A, Structure Of Alcaligenes Xylosoxidans Nitrite Reductase In
Space Group R3 - 2 Of 2
pdb|2VW4|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans - 2 Of 3
pdb|2VW4|B Chain B, Nitrite Reductase From Alcaligenes Xylosoxidans - 2 Of 3
pdb|2VW6|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans - 3 Of 3
pdb|2VW6|B Chain B, Nitrite Reductase From Alcaligenes Xylosoxidans - 3 Of 3
pdb|2VW7|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans - 1 Of 3
pdb|2VW7|B Chain B, Nitrite Reductase From Alcaligenes Xylosoxidans - 1 Of 3
pdb|2ZON|A Chain A, Crystal Structure Of Electron Transfer Complex Of Nitrite
Reductase With Cytochrome C
pdb|2ZON|B Chain B, Crystal Structure Of Electron Transfer Complex Of Nitrite
Reductase With Cytochrome C
pdb|2ZON|C Chain C, Crystal Structure Of Electron Transfer Complex Of Nitrite
Reductase With Cytochrome C
Length = 336
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V EGD + + +V N + HN+ H + A G A +T
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGAKLTN- 107
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGIPYPFAKP 159
+ G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 108 -VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|1BQ5|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans Gifu 1051
Length = 342
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V EGD + + +V N + HN+ H + A G A +T
Sbjct: 62 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGAKLTN- 113
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGIPYPFAKP 159
+ G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 114 -VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 169
>pdb|4GY4|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 278
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 58 PGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTG--QSYI 115
PGP I EGD L I+ N + S+H HG+ S +DG A + + ++ G ++Y
Sbjct: 37 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDAEIS--SDGTA-MNKSDVEPGGTRTYT 93
Query: 116 YNFTIVGQR--GTL------WWHAH---------ISWLRSTLYGPIIILPK 149
+ G+R GT +WH H +R+ LYGP+I+ K
Sbjct: 94 WRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRK 144
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 20/99 (20%)
Query: 51 VSVNGQFP--GPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPI 108
+++N + P GP A GDR+ I ++ H ++ + H HG R WAD I P
Sbjct: 160 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHR-----WADNRTGILTGPD 214
Query: 109 Q---------TGQSYIYNFTIVGQRGT---LW-WHAHIS 134
TG + + F I+ G W +H H+
Sbjct: 215 DPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQ 253
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 535 GVWFMHCHLEVHTSWGLKTAWLVL--DGKLPN 564
G W HCH++ H+ G+ +LV DG +P
Sbjct: 244 GAWMYHCHVQSHSDMGMVGLFLVKKPDGTIPG 275
>pdb|3ABG|A Chain A, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|3ABG|B Chain B, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|2XLL|A Chain A, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|B Chain B, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|C Chain C, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|D Chain D, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
Length = 534
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 13/107 (12%)
Query: 32 YKFNVELKNVTRLCH----TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWH 87
+ + VE+K T + + LV +G PGP G +++ +N+ + S+H H
Sbjct: 37 WYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLH 96
Query: 88 G--IRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAH 132
G R GWA+ IT + G Y + TLW+H H
Sbjct: 97 GSFSRAAFDGWAED---IT----EPGSFKDYYYPNRQSARTLWYHDH 136
>pdb|3CG8|A Chain A, Laccase From Streptomyces Coelicolor
pdb|3CG8|B Chain B, Laccase From Streptomyces Coelicolor
pdb|3CG8|C Chain C, Laccase From Streptomyces Coelicolor
Length = 343
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 58 PGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTG--QSYI 115
PGP I EGD L I+ N + S+H HG+ S +DG A + + ++ G ++Y
Sbjct: 75 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEIS--SDGTA-MNKSDVEPGGTRTYT 131
Query: 116 YNFTIVGQR--GTL------WWHAH---------ISWLRSTLYGPIIILPK 149
+ G+R GT +WH H +R+ LYGP+I+ K
Sbjct: 132 WRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRK 182
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 20/98 (20%)
Query: 51 VSVNGQFP--GPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPI 108
+++N + P GP A GDR+ I ++ H ++ + H HG R WAD I P
Sbjct: 198 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHR-----WADNRTGILTGPD 252
Query: 109 Q---------TGQSYIYNFTIVGQRGT---LW-WHAHI 133
TG + + F I+ G W +H H+
Sbjct: 253 DPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHV 290
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 535 GVWFMHCHLEVHTSWGLKTAWLVL--DGKLPN 564
G W HCH++ H+ G+ +LV DG +P
Sbjct: 282 GAWMYHCHVQSHSDMGMVGLFLVKKPDGTIPG 313
>pdb|3KW8|A Chain A, Two-Domain Laccase From Streptomyces Coelicolor At 2.3 A
Resolution
Length = 276
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 58 PGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTG--QSYI 115
PGP I EGD L I+ N + S+H HG+ S +DG A + + ++ G ++Y
Sbjct: 34 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEIS--SDGTA-MNKSDVEPGGTRTYT 90
Query: 116 YNFTIVGQR--GTL------WWHAH---------ISWLRSTLYGPIIILPK 149
+ G+R GT +WH H +R+ LYGP+I+ K
Sbjct: 91 WRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRK 141
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 20/99 (20%)
Query: 51 VSVNGQFP--GPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPI 108
+++N + P GP A GDR+ I ++ H ++ + H HG R WAD I P
Sbjct: 157 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHR-----WADNRTGILTGPD 211
Query: 109 Q---------TGQSYIYNFTIVGQRGT---LW-WHAHIS 134
TG + + F I+ G W +H H+
Sbjct: 212 DPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQ 250
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 535 GVWFMHCHLEVHTSWGLKTAWLVL--DGKLPNQK 566
G W HCH++ H+ G+ +LV DG +P +
Sbjct: 241 GAWMYHCHVQSHSDMGMVGLFLVKKPDGTIPGYE 274
>pdb|1NDT|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans
Length = 336
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 19/122 (15%)
Query: 47 TKTLVSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAY 102
T ++ NG PGP +V EGD + + +V N + HN+ H + A G A
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGAK 104
Query: 103 ITQCPIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGIPYPFA 157
+T + G+ F + GT +H + W + S + G +++LP+ G+ P
Sbjct: 105 LTN--VNPGEQATLRFK-ADRSGTFVYHCAPSGMVPWHVVSGMSGTLMVLPRDGLKDPAG 161
Query: 158 KP 159
P
Sbjct: 162 AP 163
>pdb|1GS6|X Chain X, Crystal Structure Of M144a Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 19/118 (16%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V EGD + + +V N + HN+ H + A G A +T
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGAKLTN- 107
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGIPYPFAKP 159
+ G+ F + GT +H + W + S G +++LP+ G+ P KP
Sbjct: 108 -VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGASGTLMVLPRDGLKDPQGKP 163
>pdb|1WA0|X Chain X, Crystal Structure Of W138h Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 19/118 (16%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V EGD + + +V N + HN+ H + A G A +T
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG-------ATGALGGAKLTN- 107
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWHAHISWL-----RSTLYGPIIILPKRGIPYPFAKP 159
+ G+ F + GT +H + S + G +++LP+ G+ P KP
Sbjct: 108 -VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPHHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|1WAE|A Chain A, Crystal Structure Of H129v Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 27/122 (22%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V EGD + + +V N + HN+ H + A G A +T
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGAKLTN- 107
Query: 107 PIQTGQSYIYNFT---------IVGQRGTLWWHAHISWLRSTLYGPIIILPKRGIPYPFA 157
+ G+ F + G + WH + S + G +++LP+ G+ P
Sbjct: 108 -VNPGEQATLRFKADRSGTFVYVCAPEGMVPWH-----VVSGMSGTLMVLPRDGLKDPQG 161
Query: 158 KP 159
KP
Sbjct: 162 KP 163
>pdb|2BP8|A Chain A, M168q Structure Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 19/118 (16%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V EGD + + +V N + HN+ H + A G A +T
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGAKLTN- 107
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGIPYPFAKP 159
+ G+ F + GT +H + W + S G +++LP+ G+ P KP
Sbjct: 108 -VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGQSGTLMVLPRDGLKDPEGKP 163
>pdb|2BP8|B Chain B, M168q Structure Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 19/118 (16%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V EGD + + +V N + HN+ H + A G A +T
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGAKLTN- 107
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGIPYPFAKP 159
+ G+ F + GT +H + W + S G +++LP+ G+ P KP
Sbjct: 108 -VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGQSGTLMVLPRDGLKDPEGKP 163
>pdb|4GXF|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 279
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 58 PGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTG--QSYI 115
PGP I EGD L I+ N + S+H HG+ S +DG A + + ++ G ++Y
Sbjct: 38 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDFEIS--SDGTA-MNKSDVEPGGTRTYT 94
Query: 116 YNFTIVGQR--GTL------WWHAH---------ISWLRSTLYGPIIILPK 149
+ G+R GT +WH H +R+ LYGP+I+ K
Sbjct: 95 WRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRK 145
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 20/99 (20%)
Query: 51 VSVNGQFP--GPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPI 108
+++N + P GP A GDR+ I ++ H ++ + H HG R WAD I P
Sbjct: 161 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHR-----WADNRTGILTGPD 215
Query: 109 Q---------TGQSYIYNFTIVGQRGT---LW-WHAHIS 134
TG + + F I+ G W +H H+
Sbjct: 216 DPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQ 254
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 535 GVWFMHCHLEVHTSWGLKTAWLVL--DGKLPN 564
G W HCH++ H+ G+ +LV DG +P
Sbjct: 245 GAWMYHCHVQSHSDMGMVGLFLVKKPDGTIPG 276
>pdb|1PF3|A Chain A, Crystal Structure Of The M441l Mutant Of The Multicopper
Oxidase Cueo
Length = 498
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 92/245 (37%), Gaps = 24/245 (9%)
Query: 47 TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
T T NG GP + + G + + + N + ++HWHG+ G DG Q
Sbjct: 35 TATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDGGP---QG 89
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWHAHI-----SWLRSTLYGPIIILPKRGIPYPFAKPY- 160
I G + T W+H H + L G ++I + K +
Sbjct: 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWG 149
Query: 161 -KEVP-IVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVK 218
+VP IV + F +D + + T D NG P + + + +L++
Sbjct: 150 IDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQH-AAPRGWLRLRLL 208
Query: 219 SGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYV-KPFETETLVITPGQTTNVLLET 277
+G R +N A +D N L V+ D + +P + L + G+ VL+E
Sbjct: 209 NGCNA--RSLNFATSD-------NRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEV 259
Query: 278 KPHYP 282
+ P
Sbjct: 260 NDNKP 264
>pdb|2R7E|A Chain A, Crystal Structure Analysis Of Coagulation Factor Viii
Length = 742
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 57/141 (40%), Gaps = 16/141 (11%)
Query: 28 ITRHYKFNVELKNVTRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWH 87
I R YK + T+ + GP + GD LLI N +I+ H
Sbjct: 420 IGRKYKKVRFMAYTDETFKTREAIQHESGILGPLLYGEVGDTLLIIFKNQASRPYNIYPH 479
Query: 88 GIRQLRSGWA----DGPAYITQCPIQTGQSYIYNFTIVGQRG---------TLWWHAHIS 134
GI +R ++ G ++ PI G+ + Y +T+ + G T ++ + ++
Sbjct: 480 GITDVRPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSDPRCLTRYYSSFVN 539
Query: 135 WLR---STLYGPIIILPKRGI 152
R S L GP++I K +
Sbjct: 540 MERDLASGLIGPLLICYKESV 560
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 95/241 (39%), Gaps = 38/241 (15%)
Query: 59 GPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQT-------- 110
GP I A D ++I + N H +S+H G+ ++ ++G Y Q +
Sbjct: 74 GPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKA--SEGAEYDDQTSQREKEDDKVFP 131
Query: 111 GQSYIYNFTIVGQRG---------TLWWHAHISW---LRSTLYGPIIILPKRGIPYPFAK 158
G S+ Y + ++ + G T + +H+ L S L G +++ + + +
Sbjct: 132 GGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQ 191
Query: 159 PYKEVPIVF-----GEWFKSDTEAIINQALQTGGGPNVSDAYTFNG-----LPGPLYNCS 208
+ ++F G+ + S+T+ + Q +T NG LPG L C
Sbjct: 192 TLHKFILLFAVFDEGKSWHSETKNSLMQDRDAASARAWPKMHTVNGYVNRSLPG-LIGCH 250
Query: 209 AKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPG 268
K + + G T V+S + F + NH +E+ + +TL++ G
Sbjct: 251 RKSVYWHVIGMGTT---PEVHSIFLEGHTFLVRNHRQASLEISPITF--LTAQTLLMDLG 305
Query: 269 Q 269
Q
Sbjct: 306 Q 306
>pdb|3CDZ|A Chain A, Crystal Structure Of Human Factor Viii
Length = 754
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 57/141 (40%), Gaps = 16/141 (11%)
Query: 28 ITRHYKFNVELKNVTRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWH 87
I R YK + T+ + GP + GD LLI N +I+ H
Sbjct: 419 IGRKYKKVRFMAYTDETFKTREAIQHESGILGPLLYGEVGDTLLIIFKNQASRPYNIYPH 478
Query: 88 GIRQLRSGWA----DGPAYITQCPIQTGQSYIYNFTIVGQRG---------TLWWHAHIS 134
GI +R ++ G ++ PI G+ + Y +T+ + G T ++ + ++
Sbjct: 479 GITDVRPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSDPRCLTRYYSSFVN 538
Query: 135 WLR---STLYGPIIILPKRGI 152
R S L GP++I K +
Sbjct: 539 MERDLASGLIGPLLICYKESV 559
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 95/241 (39%), Gaps = 38/241 (15%)
Query: 59 GPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQT-------- 110
GP I A D ++I + N H +S+H G+ ++ ++G Y Q +
Sbjct: 73 GPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKA--SEGAEYDDQTSQREKEDDKVFP 130
Query: 111 GQSYIYNFTIVGQRG---------TLWWHAHISW---LRSTLYGPIIILPKRGIPYPFAK 158
G S+ Y + ++ + G T + +H+ L S L G +++ + + +
Sbjct: 131 GGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQ 190
Query: 159 PYKEVPIVF-----GEWFKSDTEAIINQALQTGGGPNVSDAYTFNG-----LPGPLYNCS 208
+ ++F G+ + S+T+ + Q +T NG LPG L C
Sbjct: 191 TLHKFILLFAVFDEGKSWHSETKNSLMQDRDAASARAWPKMHTVNGYVNRSLPG-LIGCH 249
Query: 209 AKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPG 268
K + + G T V+S + F + NH +E+ + +TL++ G
Sbjct: 250 RKSVYWHVIGMGTT---PEVHSIFLEGHTFLVRNHRQASLEISPITF--LTAQTLLMDLG 304
Query: 269 Q 269
Q
Sbjct: 305 Q 305
>pdb|1KV7|A Chain A, Crystal Structure Of Cueo, A Multi-Copper Oxidase From E.
Coli Involved In Copper Homeostasis
pdb|1N68|A Chain A, Copper Bound To The Multicopper Oxidase Cueo
pdb|2FQD|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQE|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQF|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQG|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|3NSD|A Chain A, Silver Bound To The Multicopper Oxidase Cueo (Untagged)
pdb|3OD3|A Chain A, Cueo At 1.1 A Resolution Including Residues In Previously
Disordered Region
pdb|3PAU|A Chain A, Cueo In The Resting Oxidized State
pdb|3PAV|A Chain A, The Reduced Form Of Cueo
Length = 488
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 92/245 (37%), Gaps = 24/245 (9%)
Query: 47 TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
T T NG GP + + G + + + N + ++HWHG+ G DG Q
Sbjct: 35 TATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDGGP---QG 89
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWHAHI-----SWLRSTLYGPIIILPKRGIPYPFAKPY- 160
I G + T W+H H + L G ++I + K +
Sbjct: 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWG 149
Query: 161 -KEVP-IVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVK 218
+VP IV + F +D + + T D NG P + + + +L++
Sbjct: 150 IDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQH-AAPRGWLRLRLL 208
Query: 219 SGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYV-KPFETETLVITPGQTTNVLLET 277
+G R +N A +D N L V+ D + +P + L + G+ VL+E
Sbjct: 209 NGCNA--RSLNFATSD-------NRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEV 259
Query: 278 KPHYP 282
+ P
Sbjct: 260 NDNKP 264
>pdb|3QQX|A Chain A, Reduced Native Intermediate Of The Multicopper Oxidase
Cueo
Length = 505
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 92/245 (37%), Gaps = 24/245 (9%)
Query: 47 TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
T T NG GP + + G + + + N + ++HWHG+ G DG Q
Sbjct: 35 TATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDGGP---QG 89
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWHAHI-----SWLRSTLYGPIIILPKRGIPYPFAKPY- 160
I G + T W+H H + L G ++I + K +
Sbjct: 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWG 149
Query: 161 -KEVP-IVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVK 218
+VP IV + F +D + + T D NG P + + + +L++
Sbjct: 150 IDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQH-AAPRGWLRLRLL 208
Query: 219 SGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYV-KPFETETLVITPGQTTNVLLET 277
+G R +N A +D N L V+ D + +P + L + G+ VL+E
Sbjct: 209 NGCNA--RSLNFATSD-------NRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEV 259
Query: 278 KPHYP 282
+ P
Sbjct: 260 NDNKP 264
>pdb|2VMJ|A Chain A, Type 1 Copper-Binding Loop Of Nitrite Reductase Mutant:
130- Capegmvpwhvvsgm-144 To 130-Ctphpfm-136
Length = 329
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 17/113 (15%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V EGD + + +V N + HN+ H + A G A +T
Sbjct: 57 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG-------ATGALGGAKLTN- 108
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWHAHISWLRSTLYGPIIILPKRGIPYPFAKP 159
+ G+ F + GT +H S G +++LP+ G+ P KP
Sbjct: 109 -VNPGEQATLRFK-ADRSGTFVYHCTPHPFMS---GTLMVLPRDGLKDPQGKP 156
>pdb|3NSF|A Chain A, Apo Form Of The Multicopper Oxidase Cueo
Length = 505
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 92/245 (37%), Gaps = 24/245 (9%)
Query: 47 TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
T T NG GP + + G + + + N + ++HWHG+ G DG Q
Sbjct: 35 TATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDGGP---QG 89
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWHAHI-----SWLRSTLYGPIIILPKRGIPYPFAKPY- 160
I G + T W+H H + L G ++I + K +
Sbjct: 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWG 149
Query: 161 -KEVP-IVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVK 218
+VP IV + F +D + + T D NG P + + + +L++
Sbjct: 150 IDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQH-AAPRGWLRLRLL 208
Query: 219 SGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYV-KPFETETLVITPGQTTNVLLET 277
+G R +N A +D N L V+ D + +P + L + G+ VL+E
Sbjct: 209 NGCNA--RSLNFATSD-------NRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEV 259
Query: 278 KPHYP 282
+ P
Sbjct: 260 NDNKP 264
>pdb|3UAA|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data1)
pdb|3UAB|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data2)
pdb|3UAC|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data4)
pdb|3UAD|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data5)
pdb|3UAE|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data6)
Length = 489
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 92/245 (37%), Gaps = 24/245 (9%)
Query: 47 TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
T T NG GP + + G + + + N + ++HWHG+ G DG Q
Sbjct: 35 TATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDGGP---QG 89
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWHAHI-----SWLRSTLYGPIIILPKRGIPYPFAKPY- 160
I G + T W+H H + L G ++I + K +
Sbjct: 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWG 149
Query: 161 -KEVP-IVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVK 218
+VP IV + F +D + + T D NG P + + + +L++
Sbjct: 150 IDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQH-AAPRGWLRLRLL 208
Query: 219 SGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYV-KPFETETLVITPGQTTNVLLET 277
+G R +N A +D N L V+ D + +P + L + G+ VL+E
Sbjct: 209 NGCNA--RSLNFATSD-------NRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEV 259
Query: 278 KPHYP 282
+ P
Sbjct: 260 NDNKP 264
>pdb|3TAS|A Chain A, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|B Chain B, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|C Chain C, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TBB|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBC|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone
Length = 313
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 57 FPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTG--QSY 114
PGP I EGD L I+ N + +S+H HG+ S +DG ++ ++ G ++Y
Sbjct: 39 IPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEIS--SDGTKQ-SRSDVEPGGTRTY 95
Query: 115 IYNFTIVGQR--GTL------WWHAH---------ISWLRSTLYGPIIILPK 149
+ + G+R GT +WH H +R+ LYGP+I+ K
Sbjct: 96 TWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRK 147
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 535 GVWFMHCHLEVHTSWGLKTAWLVL--DGKLPN 564
G W HCH++ H+ G+ +LV DG +P
Sbjct: 247 GAWMYHCHVQSHSDMGMVGLFLVKKPDGTIPG 278
>pdb|1KCW|A Chain A, X-Ray Crystal Structure Of Human Ceruloplasmin At 3.0
Angstroms
Length = 1046
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 522 GGWVAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVL 558
G + + PG+W +HCH+ H G++T + VL
Sbjct: 1002 GTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVL 1038
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 98/282 (34%), Gaps = 51/282 (18%)
Query: 28 ITRHYKFNVELKNVTRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWH 87
I R YK + L+ T V F GP I A GD++ + + N + H H
Sbjct: 44 IGRLYKKALYLQYTDETFRTTIEKPVWLGFLGPIIKAETGDKVYVHLKNLASRPYTFHSH 103
Query: 88 GIRQLRSGWADGPAY--------ITQCPIQTGQSYIYNFTIVGQRG---------TLWWH 130
GI + +G Y + G+ Y Y ++ T +H
Sbjct: 104 GITYYKE--HEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNCVTRIYH 161
Query: 131 AHISW---LRSTLYGPIIILPKRGIPYPFAKPY-KEVPIVFG------EWFKSDT----- 175
+HI + S L GP+II K + K +E ++F W+ D
Sbjct: 162 SHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYC 221
Query: 176 ---EAI--INQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNS 230
E + N+ Q + YTF LPG L C A+D K YL + N
Sbjct: 222 SEPEKVDKDNEDFQESNRMYSVNGYTFGSLPG-LSMC-AEDRVKW-------YLFGMGNE 272
Query: 231 ALNDDLFFSIANHTLTVVEVDAVYVKP---FETETLVITPGQ 269
FF T +D + + P F+ + PG+
Sbjct: 273 VDVHAAFFHGQALTNKNYRIDTINLFPATLFDAYMVAQNPGE 314
>pdb|3NSC|A Chain A, C500s Mutant Of Cueo Bound To Cu(Ii)
pdb|3NT0|A Chain A, C500s (T1d) Mutant Of Cueo Soaked In And Bound To Cu(I)
Length = 505
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 92/245 (37%), Gaps = 24/245 (9%)
Query: 47 TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
T T NG GP + + G + + + N + ++HWHG+ G DG Q
Sbjct: 35 TATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDGGP---QG 89
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWHAHI-----SWLRSTLYGPIIILPKRGIPYPFAKPY- 160
I G + T W+H H + L G ++I + K +
Sbjct: 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWG 149
Query: 161 -KEVP-IVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVK 218
+VP IV + F +D + + T D NG P + + + +L++
Sbjct: 150 IDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQH-AAPRGWLRLRLL 208
Query: 219 SGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYV-KPFETETLVITPGQTTNVLLET 277
+G R +N A +D N L V+ D + +P + L + G+ VL+E
Sbjct: 209 NGCNA--RSLNFATSD-------NRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEV 259
Query: 278 KPHYP 282
+ P
Sbjct: 260 NDNKP 264
>pdb|2YXV|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXV|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
Length = 446
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 92/245 (37%), Gaps = 24/245 (9%)
Query: 47 TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
T T NG GP + + G + + + N + ++HWHG+ G DG Q
Sbjct: 35 TATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDGGP---QG 89
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWHAHI-----SWLRSTLYGPIIILPKRGIPYPFAKPY- 160
I G + T W+H H + L G ++I + K +
Sbjct: 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWG 149
Query: 161 -KEVP-IVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVK 218
+VP IV + F +D + + T D NG P + + + +L++
Sbjct: 150 IDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQH-AAPRGWLRLRLL 208
Query: 219 SGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYV-KPFETETLVITPGQTTNVLLET 277
+G R +N A +D N L V+ D + +P + L + G+ VL+E
Sbjct: 209 NGCNA--RSLNFATSD-------NRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEV 259
Query: 278 KPHYP 282
+ P
Sbjct: 260 NDNKP 264
>pdb|3NSY|A Chain A, The Multi-Copper Oxidase Cueo With Six Met To Ser
Mutations (M358s, M361s,M362s,M364s,M366s,M368s)
Length = 511
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 92/245 (37%), Gaps = 24/245 (9%)
Query: 47 TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
T T NG GP + + G + + + N + ++HWHG+ G DG Q
Sbjct: 35 TATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDGGP---QG 89
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWHAHI-----SWLRSTLYGPIIILPKRGIPYPFAKPY- 160
I G + T W+H H + L G ++I + K +
Sbjct: 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWG 149
Query: 161 -KEVP-IVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVK 218
+VP IV + F +D + + T D NG P + + + +L++
Sbjct: 150 IDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQH-AAPRGWLRLRLL 208
Query: 219 SGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYV-KPFETETLVITPGQTTNVLLET 277
+G R +N A +D N L V+ D + +P + L + G+ VL+E
Sbjct: 209 NGCNA--RSLNFATSD-------NRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEV 259
Query: 278 KPHYP 282
+ P
Sbjct: 260 NDNKP 264
>pdb|2J5W|A Chain A, Ceruloplasmin Revisited: Structural And Functional Roles Of
Various Metal Cation Binding Sites
Length = 1065
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 522 GGWVAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVL 558
G + + PG+W +HCH+ H G++T + VL
Sbjct: 1021 GTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVL 1057
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 97/282 (34%), Gaps = 51/282 (18%)
Query: 28 ITRHYKFNVELKNVTRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWH 87
I R YK + L+ T V F GP I A GD++ + + N + H H
Sbjct: 63 IGRLYKKALYLQYTDETFRTTIEKPVWLGFLGPIIKAETGDKVYVHLKNLASRPYTFHSH 122
Query: 88 GIRQLRSGWADGPAY--------ITQCPIQTGQSYIYNFTIVGQRG---------TLWWH 130
GI + +G Y + G+ Y Y ++ T +H
Sbjct: 123 GITYYKE--HEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNCVTRIYH 180
Query: 131 AHISW---LRSTLYGPIIILPKRGIPYPFAKPY-KEVPIVFG------EWFKSDT----- 175
+HI + S L GP+II K + K +E ++F W+ D
Sbjct: 181 SHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYC 240
Query: 176 ---EAI--INQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNS 230
E + N+ Q + YTF L G L C A+D K YL + N
Sbjct: 241 SEPEKVDKDNEDFQQSNRMYSVNGYTFGSLSG-LSMC-AEDRVKW-------YLFGMGNE 291
Query: 231 ALNDDLFFSIANHTLTVVEVDAVYVKP---FETETLVITPGQ 269
FF T +D + + P F+ + PG+
Sbjct: 292 VDVHAAFFHGQALTNKNYRIDTINLFPATLFDAYMVAQNPGE 333
>pdb|1NDR|A Chain A, Crystallographic Structure Of A Blue Copper Nitrite
Reductase From Alcaligenes Xylosoxidans
pdb|1NDR|B Chain B, Crystallographic Structure Of A Blue Copper Nitrite
Reductase From Alcaligenes Xylosoxidans
pdb|1NDR|C Chain C, Crystallographic Structure Of A Blue Copper Nitrite
Reductase From Alcaligenes Xylosoxidans
pdb|1NDS|A Chain A, Crystallographic Structure Of A Substrate Bound Blue
Copper Nitrite Reductase From Alcaligenes Xylosoxidans
pdb|1NDS|B Chain B, Crystallographic Structure Of A Substrate Bound Blue
Copper Nitrite Reductase From Alcaligenes Xylosoxidans
pdb|1NDS|C Chain C, Crystallographic Structure Of A Substrate Bound Blue
Copper Nitrite Reductase From Alcaligenes Xylosoxidans
Length = 330
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 21/133 (15%)
Query: 31 HYKFNVELKNVTRLCH--TKTLVSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISI 84
++ ++E K + T ++ NG PGP +V EGD + + +V N + HN+
Sbjct: 30 QFRMSIEEKKMVADDDGTTAQAMTFNGSVPGPTLVVHEGDYIELTLVNPATNSMPHNVDF 89
Query: 85 HWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRST 139
H + + GQ + F + GT +H + W + S
Sbjct: 90 HAATGALGGA---------GLTQVVPGQEAVLRFK-ADRSGTFVYHCAPAGMVPWHVVSG 139
Query: 140 LYGPIIILPKRGI 152
+ G +++LP+ G+
Sbjct: 140 MNGALMVLPRDGL 152
>pdb|3T9W|A Chain A, Small Laccase From Amycolatopsis Sp. Atcc 39116
pdb|3TA4|F Chain F, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|D Chain D, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|E Chain E, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
Length = 299
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 534 PGVWFMHCHLEVHTSWGLKTAWLV--LDGKLP 563
PG+W HCH++ H+ G+ +LV DG +P
Sbjct: 262 PGMWMYHCHVQNHSDMGMAGMFLVRNADGTMP 293
>pdb|1SDD|A Chain A, Crystal Structure Of Bovine Factor Vai
Length = 306
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 27/136 (19%)
Query: 59 GPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQC-PIQT------- 110
GP + A GD + + N +SIH GI+ S +++G +Y P++
Sbjct: 59 GPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIK--YSKFSEGASYSDHTLPMEKMDDAVAP 116
Query: 111 GQSYIYNFTIVGQRG---------TLWWHAHISWLR---STLYGPIII-----LPKRGIP 153
GQ Y Y + I G T ++++++ + S L GP++I L + G
Sbjct: 117 GQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQ 176
Query: 154 YPFAKPYKEVPIVFGE 169
F K + + VF E
Sbjct: 177 KMFEKQHVLMFAVFDE 192
>pdb|2UXT|A Chain A, Sufi Protein From Escherichia Coli
pdb|2UXT|B Chain B, Sufi Protein From Escherichia Coli
pdb|2UXV|A Chain A, Sufi Protein From Escherichia Coli
pdb|2UXV|B Chain B, Sufi Protein From Escherichia Coli
Length = 451
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 92/232 (39%), Gaps = 25/232 (10%)
Query: 53 VNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTGQ 112
+NG++ GP I +GD + + N + N+S+ G+ Q+ GPA + +
Sbjct: 43 INGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGL-QVPGPLMGGPARM----MSPNA 97
Query: 113 SYIYNFTIVGQRGTLWWHAHI-----SWLRSTLYGPIIILPK--RGIPYPFAKPYKEVPI 165
+ I TLW+HA+ + + L G ++ + + +P P + P+
Sbjct: 98 DWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPV 157
Query: 166 VFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLL 225
+ + K + + G G V D NG+ P S + +L++ +
Sbjct: 158 IIQD--KRLDNFGTPEYNEPGSGGFVGDTLLVNGVQSPYVEVS-RGWVRLRLLNASNS-- 212
Query: 226 RLVNSALNDDLFFSIANHTLTVVEVDAVYV-KPFETETLVITPGQTTNVLLE 276
R +ND L V+ D ++ P + L + PG+ +L++
Sbjct: 213 RRYQLQMND-------GRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVD 257
>pdb|1KCB|A Chain A, Crystal Structure Of A No-Forming Nitrite Reductase
Mutant: An Analog Of A Transition State In Enzymatic
Reaction
Length = 340
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 11/114 (9%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWAD-GPAYITQ 105
++ NG PGP +V E D + ++++ N + HNI H P T
Sbjct: 62 MTFNGSVPGPLMVVHENDYVELRLINPDTNTLLHNIDFHAATGALGGGALTQVNPGEETT 121
Query: 106 CPIQTGQSYIYNFTIVGQRGTLWWHAHISWLRSTLYGPIIILPKRGIPYPFAKP 159
+ + ++ + + G + WH + S + G I++LP+ G+ +P
Sbjct: 122 LRFKATKPGVFVYHCAPE-GMVPWH-----VTSGMNGAIMVLPRDGLKDEKGQP 169
>pdb|1OBF|O Chain O, The Crystal Structure Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Alcaligenes Xylosoxidans At 1.7
Resolution.
pdb|1OBF|P Chain P, The Crystal Structure Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Alcaligenes Xylosoxidans At 1.7
Resolution
Length = 335
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 9/64 (14%)
Query: 398 SINNISFVM-------PTTALLQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSS 450
SI ++SFV +L+A G+ G+ D+ T PL+ +Y +P ++T+ +S
Sbjct: 242 SIVDLSFVAKRNTTVEEVNGILKAASEGELKGIL--DYNTEPLVSVDYNHDPASSTVDAS 299
Query: 451 GTKL 454
TK+
Sbjct: 300 LTKV 303
>pdb|1NIB|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIB|B Chain B, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIB|C Chain C, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIA|A Chain A, The Structure Of Cu-nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIA|B Chain B, The Structure Of Cu-nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIA|C Chain C, The Structure Of Cu-nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|2BW4|A Chain A, Atomic Resolution Structure Of Resting State Of The
Achromobacter Cycloclastes Cu Nitrite Reductase
pdb|2BW5|A Chain A, Atomic Resolution Structure Of No-Bound Achromobacter
Cycloclastes Cu Nitrite Reductase
pdb|2BWD|A Chain A, Atomic Resolution Structure Of Achromobacter Cycloclastes
Cu Nitrite Reductase With Endogenously Bound Nitrite And
No
pdb|2BWI|A Chain A, Atomic Resolution Structure Of Nitrite -Soaked
Achromobacter Cycloclastes Cu Nitrite Reductase
pdb|1NIC|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NID|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIE|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIF|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|2NRD|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|2Y1A|A Chain A, Crystal Structure Of Achromobacter Cycloclastes Cu Nitrite
Reductase With Bound No
Length = 340
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 11/114 (9%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWAD-GPAYITQ 105
++ NG PGP +V E D + ++++ N + HNI H P T
Sbjct: 62 MTFNGSVPGPLMVVHENDYVELRLINPDTNTLLHNIDFHAATGALGGGALTQVNPGEETT 121
Query: 106 CPIQTGQSYIYNFTIVGQRGTLWWHAHISWLRSTLYGPIIILPKRGIPYPFAKP 159
+ + ++ + + G + WH + S + G I++LP+ G+ +P
Sbjct: 122 LRFKATKPGVFVYHCAPE-GMVPWH-----VTSGMNGAIMVLPRDGLKDEKGQP 169
>pdb|1RZP|A Chain A, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph6.2
pdb|1RZP|B Chain B, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph6.2
pdb|1RZP|C Chain C, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph6.2
pdb|1RZQ|A Chain A, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph5.0
pdb|1RZQ|B Chain B, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph5.0
pdb|1RZQ|C Chain C, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph5.0
Length = 335
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 11/114 (9%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWAD-GPAYITQ 105
++ NG PGP +V E D + ++++ N + HNI H P T
Sbjct: 62 MTFNGSVPGPLMVVHENDYVELRLINPDTNTLLHNIDFHAATGALGGGALTQVNPGEETT 121
Query: 106 CPIQTGQSYIYNFTIVGQRGTLWWHAHISWLRSTLYGPIIILPKRGIPYPFAKP 159
+ + ++ + + G + WH + S + G I++LP+ G+ +P
Sbjct: 122 LRFKATKPGVFVYHCAPE-GMVPWH-----VTSGMNGAIMVLPRDGLKDEKGQP 169
>pdb|1N70|A Chain A, The Crystal Structure Of Nitrite Reductase Mutant
His287ala From Rhodobacter Sphaeroides
Length = 334
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 48/121 (39%), Gaps = 20/121 (16%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ +G PGP ++ EGD + + ++ N + HNI H
Sbjct: 53 MTFDGSIPGPLMIVHEGDYVELTLINPPENTMPHNIDFHAATGALGGG---------GLT 103
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWHA-----HISW-LRSTLYGPIIILPKRGIPYPFAKPY 160
I G+ + F + G +H I W + S + G I++LP+ G+ KP
Sbjct: 104 LINPGEKVVLRFKAT-RAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPV 162
Query: 161 K 161
+
Sbjct: 163 R 163
>pdb|2AVF|A Chain A, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
pdb|2AVF|B Chain B, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
pdb|2AVF|C Chain C, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
pdb|2AVF|D Chain D, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
pdb|2AVF|E Chain E, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
pdb|2AVF|F Chain F, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
Length = 329
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 11/114 (9%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWAD-GPAYITQ 105
++ NG PGP +V E D + ++++ N + HNI H P T
Sbjct: 62 MTFNGSVPGPLMVVHENDYVELRLINPDTNTLLHNIDFHAATGALGGGALTQVNPGEETT 121
Query: 106 CPIQTGQSYIYNFTIVGQRGTLWWHAHISWLRSTLYGPIIILPKRGIPYPFAKP 159
+ + ++ + + G + WH + S + G I++LP+ G+ +P
Sbjct: 122 LRFKATKPGVFVYHCAPE-GMVPWH-----VTSGMNGAIMVLPRDGLKDEKGQP 169
>pdb|3H56|A Chain A, Met150leuPHE312CYS VARIANT OF NITRITE REDUCTASE FROM
Alcaligenes Faecalis
Length = 336
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 19/111 (17%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V + D L + ++ N + HNI H G +
Sbjct: 59 MAFNGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE-------- 110
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGI 152
I G+ I F + G +H + W + S L G I++LP+ G+
Sbjct: 111 -INPGEKTILRFKAT-KPGVFVYHCAPPGMVPWHVVSGLNGAIMVLPREGL 159
>pdb|1MZY|A Chain A, Crystal Structure Of Nitrite Reductase
Length = 333
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 48/121 (39%), Gaps = 20/121 (16%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ +G PGP ++ EGD + + ++ N + HNI H
Sbjct: 55 MTFDGSIPGPLMIVHEGDYVELTLINPPENTMPHNIDFHAATGALGGG---------GLT 105
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWHA-----HISW-LRSTLYGPIIILPKRGIPYPFAKPY 160
I G+ + F + G +H I W + S + G I++LP+ G+ KP
Sbjct: 106 LINPGEKVVLRFKAT-RAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPV 164
Query: 161 K 161
+
Sbjct: 165 R 165
>pdb|2DWT|A Chain A, Cu-Containing Nitrite Reductase At Ph 6.0 With Bound
Nitrite
pdb|2DY2|A Chain A, Nitrite Reductase Ph 6.0
Length = 329
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 48/121 (39%), Gaps = 20/121 (16%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ +G PGP ++ EGD + + ++ N + HNI H
Sbjct: 50 MTFDGSIPGPLMIVHEGDYVELTLINPPENTMPHNIDFHAATGALGGG---------GLT 100
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWHA-----HISW-LRSTLYGPIIILPKRGIPYPFAKPY 160
I G+ + F + G +H I W + S + G I++LP+ G+ KP
Sbjct: 101 LINPGEKVVLRFKAT-RAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPV 159
Query: 161 K 161
+
Sbjct: 160 R 160
>pdb|1ZV2|A Chain A, Cu-Containing Nitrite Reductase
pdb|2A3T|A Chain A, Cu-containing Nitrite Reductase
pdb|2DWS|A Chain A, Cu-containing Nitrite Reductase At Ph 8.4 With Bound
Nitrite
Length = 328
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 48/121 (39%), Gaps = 20/121 (16%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ +G PGP ++ EGD + + ++ N + HNI H
Sbjct: 50 MTFDGSIPGPLMIVHEGDYVELTLINPPENTMPHNIDFHAATGALGGG---------GLT 100
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWHA-----HISW-LRSTLYGPIIILPKRGIPYPFAKPY 160
I G+ + F + G +H I W + S + G I++LP+ G+ KP
Sbjct: 101 LINPGEKVVLRFKAT-RAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPV 159
Query: 161 K 161
+
Sbjct: 160 R 160
>pdb|1ET7|A Chain A, Crystal Structure Of Nitrite Reductase His255asp Mutant
From Alcaligenes Faecalis S-6
Length = 341
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 19/111 (17%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V + D L + ++ N + HNI H G +
Sbjct: 59 MAFNGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE-------- 110
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGI 152
I G+ I F + G +H + W + S + G I++LP+ G+
Sbjct: 111 -INPGEKTILRFKAT-KPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 159
>pdb|1ET8|A Chain A, Crystal Structure Of Nitrite Reductase His255asn Mutant
From Alcaligenes Faecalis
pdb|1J9S|A Chain A, Crystal Structure Of Nitrite Soaked Oxidized H255n Afnir
pdb|1J9S|B Chain B, Crystal Structure Of Nitrite Soaked Oxidized H255n Afnir
pdb|1J9S|C Chain C, Crystal Structure Of Nitrite Soaked Oxidized H255n Afnir
pdb|1J9T|A Chain A, Crystal Structure Of Nitrite Soaked Reduced H255n Afnir
pdb|1J9T|B Chain B, Crystal Structure Of Nitrite Soaked Reduced H255n Afnir
pdb|1J9T|C Chain C, Crystal Structure Of Nitrite Soaked Reduced H255n Afnir
Length = 341
Score = 28.9 bits (63), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 19/111 (17%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V + D L + ++ N + HNI H G +
Sbjct: 59 MAFNGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE-------- 110
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGI 152
I G+ I F + G +H + W + S + G I++LP+ G+
Sbjct: 111 -INPGEKTILRFKAT-KPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 159
>pdb|1NPJ|A Chain A, Crystal Structure Of H145a Mutant Of Nitrite Reductase
From Alcaligenes Faecalis
pdb|1NPJ|B Chain B, Crystal Structure Of H145a Mutant Of Nitrite Reductase
From Alcaligenes Faecalis
pdb|1NPJ|C Chain C, Crystal Structure Of H145a Mutant Of Nitrite Reductase
From Alcaligenes Faecalis
pdb|1NPN|A Chain A, Crystal Structure Of A Copper Reconstituted H145a Mutant
Of Nitrite Reductase From Alcaligenes Faecalis
pdb|1NPN|B Chain B, Crystal Structure Of A Copper Reconstituted H145a Mutant
Of Nitrite Reductase From Alcaligenes Faecalis
pdb|1NPN|C Chain C, Crystal Structure Of A Copper Reconstituted H145a Mutant
Of Nitrite Reductase From Alcaligenes Faecalis
pdb|2PPD|A Chain A, Oxidized H145a Mutant Of Afnir Bound To Nitric Oxide
pdb|2PPD|B Chain B, Oxidized H145a Mutant Of Afnir Bound To Nitric Oxide
pdb|2PPD|C Chain C, Oxidized H145a Mutant Of Afnir Bound To Nitric Oxide
pdb|2PPE|A Chain A, Reduced H145a Mutant Of Afnir Exposed To No
pdb|2PPE|B Chain B, Reduced H145a Mutant Of Afnir Exposed To No
pdb|2PPE|C Chain C, Reduced H145a Mutant Of Afnir Exposed To No
Length = 343
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 19/111 (17%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V + D L + ++ N + HNI H G +
Sbjct: 65 MAFNGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE-------- 116
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGI 152
I G+ I F + G +H + W + S + G I++LP+ G+
Sbjct: 117 -INPGEKTILRFKAT-KPGVFVYHCAPPGMVPWAVVSGMNGAIMVLPREGL 165
>pdb|2FJS|A Chain A, Crystal Structure Of Anaerobically Reduced Wild Type
Nitrite Reductase From A. Faecalis
pdb|2FJS|B Chain B, Crystal Structure Of Anaerobically Reduced Wild Type
Nitrite Reductase From A. Faecalis
pdb|2FJS|C Chain C, Crystal Structure Of Anaerobically Reduced Wild Type
Nitrite Reductase From A. Faecalis
pdb|2E86|A Chain A, Azide Bound To Copper Containing Nitrite Reductase From A.
Faecalis S- 6
pdb|2E86|B Chain B, Azide Bound To Copper Containing Nitrite Reductase From A.
Faecalis S- 6
pdb|2E86|C Chain C, Azide Bound To Copper Containing Nitrite Reductase From A.
Faecalis S- 6
Length = 337
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 19/111 (17%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V + D L + ++ N + HNI H G +
Sbjct: 59 MAFNGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE-------- 110
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGI 152
I G+ I F + G +H + W + S + G I++LP+ G+
Sbjct: 111 -INPGEKTILRFKAT-KPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 159
>pdb|1L9Q|A Chain A, Crystal Structure Of The I257l Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9Q|B Chain B, Crystal Structure Of The I257l Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9Q|C Chain C, Crystal Structure Of The I257l Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
Length = 341
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 19/111 (17%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V + D L + ++ N + HNI H G +
Sbjct: 59 MAFNGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE-------- 110
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGI 152
I G+ I F + G +H + W + S + G I++LP+ G+
Sbjct: 111 -INPGEKTILRFKAT-KPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 159
>pdb|1L9R|A Chain A, Crystal Structure Of The I257m Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9R|B Chain B, Crystal Structure Of The I257m Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9R|C Chain C, Crystal Structure Of The I257m Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
Length = 341
Score = 28.9 bits (63), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 19/111 (17%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V + D L + ++ N + HNI H G +
Sbjct: 59 MAFNGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE-------- 110
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGI 152
I G+ I F + G +H + W + S + G I++LP+ G+
Sbjct: 111 -INPGEKTILRFKAT-KPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 159
>pdb|3H4F|A Chain A, Met62leu Variant Of Nitrite Reductase From Alcaligenes
Faeclis
pdb|3H4F|B Chain B, Met62leu Variant Of Nitrite Reductase From Alcaligenes
Faeclis
pdb|3H4F|C Chain C, Met62leu Variant Of Nitrite Reductase From Alcaligenes
Faeclis
Length = 336
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 19/111 (17%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V + D L + ++ N + HNI H G +
Sbjct: 59 LAFNGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE-------- 110
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGI 152
I G+ I F + G +H + W + S + G I++LP+ G+
Sbjct: 111 -INPGEKTILRFKAT-KPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 159
>pdb|1L9O|A Chain A, Crystal Structure Of Nitrite Soaked I257a Variant Of The
Copper-Containing Nitrite Reductase From Alcaligenes
Faecalis
pdb|1L9O|B Chain B, Crystal Structure Of Nitrite Soaked I257a Variant Of The
Copper-Containing Nitrite Reductase From Alcaligenes
Faecalis
pdb|1L9O|C Chain C, Crystal Structure Of Nitrite Soaked I257a Variant Of The
Copper-Containing Nitrite Reductase From Alcaligenes
Faecalis
Length = 341
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 19/111 (17%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V + D L + ++ N + HNI H G +
Sbjct: 59 MAFNGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE-------- 110
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGI 152
I G+ I F + G +H + W + S + G I++LP+ G+
Sbjct: 111 -INPGEKTILRFKAT-KPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 159
>pdb|1L9S|A Chain A, Crystal Structure Of The I257t Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9S|B Chain B, Crystal Structure Of The I257t Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9S|C Chain C, Crystal Structure Of The I257t Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
Length = 341
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 19/111 (17%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V + D L + ++ N + HNI H G +
Sbjct: 59 MAFNGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE-------- 110
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGI 152
I G+ I F + G +H + W + S + G I++LP+ G+
Sbjct: 111 -INPGEKTILRFKAT-KPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 159
>pdb|1L9T|A Chain A, Crystal Structure Of The I257v Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9T|B Chain B, Crystal Structure Of The I257v Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9T|C Chain C, Crystal Structure Of The I257v Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
Length = 341
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 19/111 (17%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V + D L + ++ N + HNI H G +
Sbjct: 59 MAFNGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE-------- 110
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGI 152
I G+ I F + G +H + W + S + G I++LP+ G+
Sbjct: 111 -INPGEKTILRFKAT-KPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 159
>pdb|1ET5|A Chain A, Crystal Structure Of Nitrite Reductase Asp98asn Mutant
From Alcaligenes Faecalis S-6
pdb|1J9Q|A Chain A, Crystal Structure Of Nitrite Soaked Oxidized D98n Afnir
pdb|1J9Q|B Chain B, Crystal Structure Of Nitrite Soaked Oxidized D98n Afnir
pdb|1J9Q|C Chain C, Crystal Structure Of Nitrite Soaked Oxidized D98n Afnir
pdb|1J9R|A Chain A, Crystal Structure Of Nitrite Soaked Reduced D98n Afnir
pdb|1J9R|B Chain B, Crystal Structure Of Nitrite Soaked Reduced D98n Afnir
pdb|1J9R|C Chain C, Crystal Structure Of Nitrite Soaked Reduced D98n Afnir
pdb|2PPF|A Chain A, Reduced Mutant D98n Of Afnir Exposed To Nitric Oxide
pdb|2PPF|B Chain B, Reduced Mutant D98n Of Afnir Exposed To Nitric Oxide
pdb|2PPF|C Chain C, Reduced Mutant D98n Of Afnir Exposed To Nitric Oxide
Length = 341
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 19/111 (17%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V + D L + ++ N + HNI+ H G +
Sbjct: 59 MAFNGTVPGPLMVVHQDDYLELTLINPETNTLMHNINFHAATGALGGGGLTE-------- 110
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGI 152
I G+ I F + G +H + W + S + G I++LP+ G+
Sbjct: 111 -INPGEKTILRFKAT-KPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 159
>pdb|1SJM|A Chain A, Nitrite Bound Copper Containing Nitrite Reductase
pdb|1SJM|B Chain B, Nitrite Bound Copper Containing Nitrite Reductase
pdb|1SJM|C Chain C, Nitrite Bound Copper Containing Nitrite Reductase
pdb|1SNR|A Chain A, Nitric Oxide Bound To Cu Nitrite Reductase
pdb|1SNR|B Chain B, Nitric Oxide Bound To Cu Nitrite Reductase
pdb|1SNR|C Chain C, Nitric Oxide Bound To Cu Nitrite Reductase
pdb|2P80|A Chain A, Solution Structure Of The Complex Between Nitrite
Reductase And Pseudoazurin From A. Faecalis
pdb|2P80|B Chain B, Solution Structure Of The Complex Between Nitrite
Reductase And Pseudoazurin From A. Faecalis
pdb|2P80|C Chain C, Solution Structure Of The Complex Between Nitrite
Reductase And Pseudoazurin From A. Faecalis
pdb|2PP7|A Chain A, Crystal Structure Of Anaerobically Manipulated Wild Type
Oxidized Afnir (acetate Bound)
pdb|2PP7|B Chain B, Crystal Structure Of Anaerobically Manipulated Wild Type
Oxidized Afnir (acetate Bound)
pdb|2PP7|C Chain C, Crystal Structure Of Anaerobically Manipulated Wild Type
Oxidized Afnir (acetate Bound)
pdb|2PP8|A Chain A, Formate Bound To Oxidized Wild Type Afnir
pdb|2PP8|B Chain B, Formate Bound To Oxidized Wild Type Afnir
pdb|2PP8|C Chain C, Formate Bound To Oxidized Wild Type Afnir
pdb|2PP9|A Chain A, Nitrate Bound Wild Type Oxidized Afnir
pdb|2PP9|B Chain B, Nitrate Bound Wild Type Oxidized Afnir
pdb|2PP9|C Chain C, Nitrate Bound Wild Type Oxidized Afnir
pdb|2PPA|A Chain A, Anaerobically Manipulated Wild Type Oxidized Afnir Bound
To Nitrous Oxide
pdb|2PPA|B Chain B, Anaerobically Manipulated Wild Type Oxidized Afnir Bound
To Nitrous Oxide
pdb|2PPA|C Chain C, Anaerobically Manipulated Wild Type Oxidized Afnir Bound
To Nitrous Oxide
pdb|2PPC|A Chain A, Oxidized Wild Type Afnir Exposed To No (Nitrite Bound)
pdb|2PPC|B Chain B, Oxidized Wild Type Afnir Exposed To No (Nitrite Bound)
pdb|2PPC|C Chain C, Oxidized Wild Type Afnir Exposed To No (Nitrite Bound)
Length = 341
Score = 28.9 bits (63), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 19/111 (17%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V + D L + ++ N + HNI H G +
Sbjct: 59 MAFNGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE-------- 110
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGI 152
I G+ I F + G +H + W + S + G I++LP+ G+
Sbjct: 111 -INPGEKTILRFKAT-KPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 159
>pdb|1L9P|A Chain A, Crystal Structure Of Nitrite Soaked I257g Variant Of The
Copper-Containing Nitrite Reductase From Alcaligenes
Faecalies S-6
pdb|1L9P|B Chain B, Crystal Structure Of Nitrite Soaked I257g Variant Of The
Copper-Containing Nitrite Reductase From Alcaligenes
Faecalies S-6
pdb|1L9P|C Chain C, Crystal Structure Of Nitrite Soaked I257g Variant Of The
Copper-Containing Nitrite Reductase From Alcaligenes
Faecalies S-6
Length = 341
Score = 28.5 bits (62), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 19/111 (17%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V + D L + ++ N + HNI H G +
Sbjct: 59 MAFNGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE-------- 110
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGI 152
I G+ I F + G +H + W + S + G I++LP+ G+
Sbjct: 111 -INPGEKTILRFKAT-KPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 159
>pdb|2AFN|A Chain A, Structure Of Alcaligenes Faecalis Nitrite Reductase And A
Copper Site Mutant, M150e, That Contains Zinc
pdb|2AFN|B Chain B, Structure Of Alcaligenes Faecalis Nitrite Reductase And A
Copper Site Mutant, M150e, That Contains Zinc
pdb|2AFN|C Chain C, Structure Of Alcaligenes Faecalis Nitrite Reductase And A
Copper Site Mutant, M150e, That Contains Zinc
pdb|1AQ8|A Chain A, Structure Of Alcaligenes Faecalis Nitrite Reductase
Reduced With Ascorbate
pdb|1AQ8|B Chain B, Structure Of Alcaligenes Faecalis Nitrite Reductase
Reduced With Ascorbate
pdb|1AQ8|C Chain C, Structure Of Alcaligenes Faecalis Nitrite Reductase
Reduced With Ascorbate
pdb|1AS6|A Chain A, Structure Of Nitrite Bound To Oxidized Alcaligenes
Faecalis Nitrite Reductase At Cryo Temperature
pdb|1AS6|B Chain B, Structure Of Nitrite Bound To Oxidized Alcaligenes
Faecalis Nitrite Reductase At Cryo Temperature
pdb|1AS6|C Chain C, Structure Of Nitrite Bound To Oxidized Alcaligenes
Faecalis Nitrite Reductase At Cryo Temperature
pdb|1AS7|A Chain A, Structure Of Alcaligenes Faecalis Nitrite Reductase At
Cryo Temperature
pdb|1AS7|B Chain B, Structure Of Alcaligenes Faecalis Nitrite Reductase At
Cryo Temperature
pdb|1AS7|C Chain C, Structure Of Alcaligenes Faecalis Nitrite Reductase At
Cryo Temperature
pdb|1AS8|A Chain A, Structure Of Nitrite Bound To Reduced Alcaligenes Faecalis
Nitrite Reductase At Cryo Temperature
pdb|1AS8|B Chain B, Structure Of Nitrite Bound To Reduced Alcaligenes Faecalis
Nitrite Reductase At Cryo Temperature
pdb|1AS8|C Chain C, Structure Of Nitrite Bound To Reduced Alcaligenes Faecalis
Nitrite Reductase At Cryo Temperature
Length = 343
Score = 28.5 bits (62), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 19/111 (17%)
Query: 51 VSVNGQFPGPRIVAREGDRLLIKVV----NHVQHNISIHWHGIRQLRSGWADGPAYITQC 106
++ NG PGP +V + D L + ++ N + HNI H G +
Sbjct: 65 MAFNGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE-------- 116
Query: 107 PIQTGQSYIYNFTIVGQRGTLWWH----AHISW-LRSTLYGPIIILPKRGI 152
I G+ I F + G +H + W + S + G I++LP+ G+
Sbjct: 117 -INPGEKTILRFKAT-KPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 165
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,870,388
Number of Sequences: 62578
Number of extensions: 765779
Number of successful extensions: 1605
Number of sequences better than 100.0: 109
Number of HSP's better than 100.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 1286
Number of HSP's gapped (non-prelim): 244
length of query: 577
length of database: 14,973,337
effective HSP length: 104
effective length of query: 473
effective length of database: 8,465,225
effective search space: 4004051425
effective search space used: 4004051425
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)