Query 008109
Match_columns 577
No_of_seqs 228 out of 1726
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 18:20:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008109.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008109hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 1E-100 4E-105 838.3 56.9 512 27-577 1-538 (552)
2 3sqr_A Laccase; multicopper ox 100.0 1.3E-96 4E-101 799.0 54.3 464 26-560 64-545 (580)
3 1v10_A Laccase; multicopper bl 100.0 1.4E-95 5E-100 791.2 46.0 485 17-577 11-508 (521)
4 1zpu_A Iron transport multicop 100.0 3.8E-94 1.3E-98 780.8 49.5 477 28-577 1-500 (534)
5 3pxl_A Laccase; 4-copper prote 100.0 6.5E-94 2.2E-98 769.6 50.1 456 30-558 4-470 (499)
6 3t6v_A Laccase; beta barrel, o 100.0 1.1E-93 3.8E-98 767.9 47.8 457 29-559 4-471 (495)
7 2q9o_A Laccase-1; multicopper 100.0 8.1E-92 2.8E-96 767.3 48.2 486 25-577 29-540 (559)
8 1hfu_A Laccase 1; oxidoreducta 100.0 1.1E-91 3.7E-96 758.3 43.6 468 30-577 5-487 (503)
9 2xu9_A Laccase; oxidoreductase 100.0 2.1E-83 7.2E-88 683.3 40.1 403 27-558 14-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 2.2E-83 7.7E-88 683.7 32.7 406 28-561 17-443 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 4.2E-81 1.4E-85 677.1 39.2 421 29-561 36-477 (534)
12 2wsd_A Spore coat protein A; o 100.0 6.4E-80 2.2E-84 667.9 40.7 429 29-559 25-510 (513)
13 3zx1_A Oxidoreductase, putativ 100.0 1.6E-79 5.5E-84 653.7 41.9 420 25-558 46-480 (481)
14 3aw5_A Multicopper oxidase; be 100.0 1.4E-79 4.7E-84 653.4 31.5 396 29-558 20-448 (448)
15 3gyr_A PHS, phenoxazinone synt 100.0 2.3E-78 7.9E-83 674.4 41.7 462 27-561 30-593 (612)
16 3od3_A Blue copper oxidase CUE 100.0 2.3E-77 7.7E-82 636.7 36.2 426 28-557 16-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 1.4E-75 4.7E-80 638.2 44.2 459 28-561 31-593 (612)
18 2j5w_A Ceruloplasmin, ferroxid 100.0 2.8E-53 9.6E-58 493.4 41.9 270 23-315 15-358 (1065)
19 3g5w_A Multicopper oxidase typ 100.0 2E-53 6.7E-58 432.4 30.3 271 28-315 1-278 (318)
20 2zwn_A Two-domain type laccase 100.0 5.7E-52 1.9E-56 426.3 34.0 271 28-315 2-279 (339)
21 2r7e_A Coagulation factor VIII 100.0 6E-53 2.1E-57 471.8 18.5 238 33-294 50-315 (742)
22 2dv6_A Nitrite reductase; elec 100.0 3.1E-49 1.1E-53 422.8 26.1 401 26-562 25-436 (447)
23 1kbv_A ANIA, major outer membr 100.0 3.5E-48 1.2E-52 396.2 28.3 261 26-315 35-309 (327)
24 3gdc_A Multicopper oxidase; be 100.0 7.4E-48 2.5E-52 386.7 28.8 235 27-293 32-273 (288)
25 2j5w_A Ceruloplasmin, ferroxid 100.0 1.2E-45 4.1E-50 429.4 25.9 400 46-561 616-1060(1065)
26 2zoo_A Probable nitrite reduct 100.0 1.1E-44 3.6E-49 386.8 29.2 263 26-315 25-299 (442)
27 3kw8_A Laccase, putative coppe 100.0 1.4E-44 4.8E-49 360.6 24.2 240 24-314 2-266 (276)
28 1mzy_A Copper-containing nitri 100.0 7.9E-44 2.7E-48 365.7 28.1 267 26-315 29-320 (333)
29 3t9w_A Small laccase, multi-co 100.0 3.2E-44 1.1E-48 361.5 23.5 247 20-314 20-288 (299)
30 3tas_A Small laccase, multi-co 100.0 3.2E-44 1.1E-48 364.4 23.8 242 23-313 7-271 (313)
31 1oe1_A Dissimilatory copper-co 100.0 4.8E-43 1.6E-47 360.5 24.2 268 26-315 29-320 (336)
32 2bw4_A Copper-containing nitri 100.0 1.4E-42 4.7E-47 357.6 25.6 268 26-315 35-326 (340)
33 1sdd_B Coagulation factor V; c 100.0 2.5E-40 8.7E-45 368.5 25.8 250 26-294 3-313 (647)
34 3cg8_A Laccase; oxidoreductase 100.0 1E-39 3.4E-44 334.8 23.4 235 27-314 46-307 (343)
35 1sdd_A Coagulation factor V; c 100.0 7.2E-42 2.5E-46 346.2 5.4 212 50-293 51-285 (306)
36 2dv6_A Nitrite reductase; elec 100.0 2.8E-38 9.5E-43 338.0 30.9 260 26-315 160-435 (447)
37 2r7e_B Coagulation factor VIII 100.0 6.3E-40 2.1E-44 367.1 10.7 252 25-293 129-441 (770)
38 2r7e_A Coagulation factor VIII 100.0 1.3E-36 4.5E-41 339.9 5.8 218 56-294 448-697 (742)
39 3gdc_A Multicopper oxidase; be 100.0 2.5E-28 8.6E-33 244.7 17.7 233 193-559 55-288 (288)
40 3cg8_A Laccase; oxidoreductase 100.0 4.5E-28 1.5E-32 248.3 17.7 219 211-560 75-307 (343)
41 2zwn_A Two-domain type laccase 99.9 4.3E-27 1.5E-31 241.3 19.7 246 193-560 24-278 (339)
42 3g5w_A Multicopper oxidase typ 99.9 4.4E-27 1.5E-31 238.6 18.8 247 193-560 23-277 (318)
43 3t9w_A Small laccase, multi-co 99.9 1E-26 3.5E-31 233.8 17.5 220 211-561 56-289 (299)
44 3kw8_A Laccase, putative coppe 99.9 1.4E-26 4.7E-31 230.6 17.7 220 211-561 34-267 (276)
45 3tas_A Small laccase, multi-co 99.9 1.6E-25 5.4E-30 227.0 20.9 220 211-561 40-273 (313)
46 1sdd_A Coagulation factor V; c 99.9 8.5E-24 2.9E-28 213.6 2.8 239 195-560 52-301 (306)
47 1sdd_B Coagulation factor V; c 99.9 3.4E-21 1.2E-25 214.4 18.4 250 211-559 67-327 (647)
48 2bw4_A Copper-containing nitri 99.9 7.1E-20 2.4E-24 188.1 25.6 94 453-562 231-327 (340)
49 1kbv_A ANIA, major outer membr 99.8 3.7E-20 1.3E-24 188.7 20.6 249 193-561 59-309 (327)
50 1mzy_A Copper-containing nitri 99.8 1.8E-18 6.1E-23 177.0 21.8 93 454-561 226-320 (333)
51 2r7e_B Coagulation factor VIII 99.8 5.2E-21 1.8E-25 214.3 2.2 86 455-558 370-455 (770)
52 1oe1_A Dissimilatory copper-co 99.8 5E-17 1.7E-21 166.5 24.6 107 453-575 225-335 (336)
53 2zoo_A Probable nitrite reduct 99.8 1.3E-17 4.4E-22 177.5 18.5 249 193-561 49-299 (442)
54 2uxt_A Protein SUFI, SUFI; oxi 99.7 4.4E-16 1.5E-20 165.4 23.2 237 29-293 152-426 (451)
55 2xu9_A Laccase; oxidoreductase 99.7 8.7E-16 3E-20 162.8 22.7 214 45-293 174-425 (439)
56 1hfu_A Laccase 1; oxidoreducta 99.6 5.9E-14 2E-18 151.2 24.3 240 48-293 165-455 (503)
57 1v10_A Laccase; multicopper bl 99.6 5.3E-14 1.8E-18 152.1 23.7 236 48-293 191-476 (521)
58 3zx1_A Oxidoreductase, putativ 99.6 1.4E-13 4.8E-18 146.4 23.1 222 47-293 210-466 (481)
59 3cvb_A Plastocyanin; cupredoxi 99.6 7.2E-16 2.5E-20 129.9 4.4 90 55-148 14-105 (105)
60 3t6v_A Laccase; beta barrel, o 99.5 1E-12 3.4E-17 140.7 24.3 240 47-292 167-455 (495)
61 3od3_A Blue copper oxidase CUE 99.5 1.1E-12 3.7E-17 139.5 21.5 235 47-293 182-475 (488)
62 1zpu_A Iron transport multicop 99.5 3.5E-12 1.2E-16 138.0 25.4 240 48-293 167-466 (534)
63 3pxl_A Laccase; 4-copper prote 99.5 3E-12 1E-16 137.0 24.3 240 47-292 165-455 (499)
64 1aoz_A Ascorbate oxidase; oxid 99.5 2.3E-12 7.8E-17 140.5 22.8 222 61-293 205-510 (552)
65 1iby_A Nitrosocyanin; RED copp 99.5 2.3E-13 7.8E-18 115.9 11.7 105 30-148 2-112 (112)
66 3aw5_A Multicopper oxidase; be 99.5 1.2E-12 4.2E-17 138.7 19.2 213 46-293 167-434 (448)
67 2q9o_A Laccase-1; multicopper 99.5 1E-11 3.5E-16 135.2 26.6 241 48-293 195-506 (559)
68 2g23_A PHS, phenoxazinone synt 99.4 1E-11 3.4E-16 135.5 22.1 231 47-294 253-577 (612)
69 2cal_A Rusticyanin; iron respi 99.4 1.1E-12 3.9E-17 117.7 11.2 99 44-147 46-154 (154)
70 2wsd_A Spore coat protein A; o 99.3 4.7E-12 1.6E-16 136.7 12.3 218 47-294 229-496 (513)
71 3abg_A Bilirubin oxidase; clea 99.3 2.1E-11 7.1E-16 131.8 17.3 230 48-293 201-460 (534)
72 1fwx_A Nitrous oxide reductase 99.3 5.9E-12 2E-16 135.3 11.3 96 44-150 497-594 (595)
73 2ov0_A Amicyanin; beta-sandwic 99.2 4.1E-11 1.4E-15 100.5 10.7 79 54-147 27-105 (105)
74 3sqr_A Laccase; multicopper ox 99.2 2.7E-09 9.2E-14 115.7 25.4 238 48-292 225-528 (580)
75 2aan_A Auracyanin A; cupredoxi 99.2 5.1E-11 1.7E-15 105.4 7.9 95 453-558 35-139 (139)
76 3cvb_A Plastocyanin; cupredoxi 99.1 1.8E-10 6.1E-15 96.6 8.8 85 453-558 19-104 (105)
77 2gim_A Plastocyanin; beta shee 99.0 5.6E-10 1.9E-14 93.7 8.6 83 60-148 20-106 (106)
78 3gyr_A PHS, phenoxazinone synt 99.0 2.1E-08 7.2E-13 110.9 21.9 233 47-294 253-577 (612)
79 2aan_A Auracyanin A; cupredoxi 99.0 2.9E-09 9.8E-14 94.0 10.8 91 56-147 31-139 (139)
80 4hci_A Cupredoxin 1; structura 98.8 1.5E-08 5.2E-13 83.9 9.3 79 54-147 22-100 (100)
81 2gim_A Plastocyanin; beta shee 98.8 9.8E-09 3.4E-13 86.0 8.1 85 453-558 20-105 (106)
82 1qhq_A Protein (auracyanin); e 98.8 2.3E-08 7.8E-13 88.4 10.5 91 57-148 30-140 (140)
83 2plt_A Plastocyanin; electron 98.7 1.8E-08 6.3E-13 83.0 6.7 80 60-147 18-98 (98)
84 1qhq_A Protein (auracyanin); e 98.7 4E-08 1.4E-12 86.7 9.3 98 454-558 34-139 (140)
85 1pcs_A Plastocyanin; electron 98.7 5.8E-08 2E-12 80.0 8.3 80 60-147 19-98 (98)
86 3c75_A Amicyanin; copper prote 98.6 1.1E-07 3.7E-12 82.9 9.1 79 54-147 54-132 (132)
87 1bxv_A Plastocyanin; copper pr 98.6 1.1E-07 3.6E-12 77.2 8.5 74 59-147 18-91 (91)
88 1pcs_A Plastocyanin; electron 98.6 6.3E-08 2.2E-12 79.8 6.7 79 454-558 20-98 (98)
89 1b3i_A PETE protein, protein ( 98.6 1.7E-07 5.7E-12 77.0 8.7 77 60-147 19-97 (97)
90 1kdj_A Plastocyanin; electron 98.6 1.8E-07 6.1E-12 77.6 8.7 77 60-147 17-102 (102)
91 2plt_A Plastocyanin; electron 98.5 2.4E-07 8.3E-12 76.2 8.9 80 454-558 19-98 (98)
92 3erx_A Pseudoazurin; copper pr 98.5 3.4E-07 1.1E-11 78.4 9.4 75 60-149 21-95 (123)
93 1bxv_A Plastocyanin; copper pr 98.5 3.4E-07 1.2E-11 74.1 8.9 72 454-558 20-91 (91)
94 1byp_A Protein (plastocyanin); 98.5 4E-07 1.4E-11 75.0 9.3 77 60-147 17-99 (99)
95 3tu6_A Pseudoazurin (blue copp 98.5 2.4E-07 8E-12 79.8 7.9 76 60-150 23-98 (127)
96 1plc_A Plastocyanin; electron 98.5 4.4E-07 1.5E-11 74.8 8.5 77 60-147 17-99 (99)
97 1b3i_A PETE protein, protein ( 98.4 1.8E-07 6.3E-12 76.8 5.2 78 454-558 20-97 (97)
98 3ef4_A Pseudoazurin, blue copp 98.4 5.2E-07 1.8E-11 77.1 8.0 76 60-150 22-97 (124)
99 1iby_A Nitrosocyanin; RED copp 98.4 1.5E-06 5E-11 73.4 9.8 75 453-559 38-112 (112)
100 1byp_A Protein (plastocyanin); 98.4 1.3E-06 4.4E-11 71.9 8.6 82 454-558 18-99 (99)
101 1cuo_A Protein (azurin ISO-2); 98.3 1.3E-06 4.6E-11 75.3 8.7 89 60-148 18-129 (129)
102 1id2_A Amicyanin; beta barrel, 98.3 3.1E-06 1E-10 70.6 9.9 77 56-147 30-106 (106)
103 4hci_A Cupredoxin 1; structura 98.3 2.6E-06 9E-11 70.2 9.3 72 454-558 29-100 (100)
104 1paz_A Pseudoazurin precursor; 98.3 3.5E-06 1.2E-10 72.1 9.3 75 60-149 21-95 (123)
105 3ay2_A Lipid modified azurin p 98.2 1.9E-06 6.6E-11 77.4 7.7 92 56-148 54-167 (167)
106 1iuz_A Plastocyanin; electron 98.2 5.5E-06 1.9E-10 68.0 9.8 77 60-147 18-98 (98)
107 1pmy_A Pseudoazurin; electron 98.2 3.6E-06 1.2E-10 72.1 8.3 76 60-150 21-96 (123)
108 1kdj_A Plastocyanin; electron 98.2 2.6E-06 9E-11 70.5 7.0 86 453-558 17-102 (102)
109 3sbq_A Nitrous-oxide reductase 98.1 1.1E-05 3.8E-10 85.0 11.7 91 48-149 546-638 (638)
110 2ccw_A Azurin II, AZN-2; elect 98.1 1.2E-05 4.1E-10 69.3 10.0 88 60-148 18-129 (129)
111 2iaa_C Azurin; quinoprotein, t 98.1 1.4E-05 4.8E-10 68.7 10.3 92 56-148 13-128 (128)
112 1nwp_A Azurin; electron transp 98.1 1.7E-05 5.9E-10 68.1 9.8 91 56-147 14-128 (128)
113 2ux6_A Pseudoazurin; type-1 co 98.1 1.2E-05 4E-10 68.7 8.6 74 60-150 21-94 (122)
114 1plc_A Plastocyanin; electron 98.0 7.7E-06 2.6E-10 67.2 6.6 83 453-558 17-99 (99)
115 2cal_A Rusticyanin; iron respi 97.9 2.3E-05 7.8E-10 69.9 8.3 89 453-558 61-154 (154)
116 1fwx_A Nitrous oxide reductase 97.9 4.4E-05 1.5E-09 82.2 11.1 79 452-560 512-593 (595)
117 2ov0_A Amicyanin; beta-sandwic 97.8 7.2E-05 2.5E-09 62.1 8.9 73 453-558 33-105 (105)
118 3fsa_A Azurin; copper, cupredo 97.4 0.00086 2.9E-08 56.7 10.1 86 57-147 15-125 (125)
119 3tu6_A Pseudoazurin (blue copp 97.3 0.00049 1.7E-08 58.9 6.8 76 453-561 23-98 (127)
120 3ef4_A Pseudoazurin, blue copp 97.2 0.0007 2.4E-08 57.6 7.5 74 454-560 23-96 (124)
121 3erx_A Pseudoazurin; copper pr 97.2 0.00092 3.1E-08 56.9 8.1 74 454-560 22-95 (123)
122 1iuz_A Plastocyanin; electron 97.1 0.002 7E-08 52.4 8.5 81 453-558 18-98 (98)
123 1id2_A Amicyanin; beta barrel, 97.0 0.0029 1E-07 52.3 8.9 73 453-558 34-106 (106)
124 2cua_A Protein (CUA); CUA cent 96.9 0.0051 1.7E-07 53.2 9.8 74 60-148 60-135 (135)
125 3c75_A Amicyanin; copper prote 96.9 0.0041 1.4E-07 53.6 8.9 73 453-558 60-132 (132)
126 3s8f_B Cytochrome C oxidase su 96.8 0.0081 2.8E-07 53.7 10.7 74 60-148 93-168 (168)
127 1paz_A Pseudoazurin precursor; 96.6 0.008 2.7E-07 51.0 8.4 75 453-560 21-95 (123)
128 1pmy_A Pseudoazurin; electron 96.4 0.0085 2.9E-07 50.9 7.4 38 519-560 58-95 (123)
129 3sbq_A Nitrous-oxide reductase 96.3 0.018 6E-07 61.0 11.0 79 453-559 558-637 (638)
130 3ay2_A Lipid modified azurin p 96.2 0.023 7.7E-07 50.8 9.4 90 454-558 59-166 (167)
131 1cuo_A Protein (azurin ISO-2); 96.0 0.051 1.7E-06 46.4 10.3 91 453-558 18-128 (129)
132 2ux6_A Pseudoazurin; type-1 co 95.6 0.032 1.1E-06 47.2 7.4 73 453-560 21-93 (122)
133 2cua_A Protein (CUA); CUA cent 95.4 0.075 2.6E-06 45.7 9.2 70 455-558 62-134 (135)
134 2ccw_A Azurin II, AZN-2; elect 95.1 0.17 5.7E-06 43.1 10.3 44 514-558 82-128 (129)
135 1nwp_A Azurin; electron transp 94.7 0.18 6.2E-06 42.8 9.6 44 514-558 82-128 (128)
136 2iaa_C Azurin; quinoprotein, t 94.7 0.096 3.3E-06 44.6 7.7 44 514-558 81-127 (128)
137 3fsa_A Azurin; copper, cupredo 94.5 0.25 8.7E-06 41.5 9.7 97 453-558 18-125 (125)
138 3s8f_B Cytochrome C oxidase su 93.1 0.47 1.6E-05 42.2 9.4 72 455-558 95-167 (168)
139 3isy_A Bsupi, intracellular pr 90.1 2.9 9.7E-05 34.8 10.4 70 222-292 21-101 (120)
140 3isy_A Bsupi, intracellular pr 82.4 17 0.00057 30.1 11.0 78 47-135 21-103 (120)
141 1cyx_A CYOA; electron transpor 70.3 17 0.00059 33.1 8.5 76 60-150 41-119 (205)
142 3hb3_B Cytochrome C oxidase su 67.5 53 0.0018 31.8 11.9 76 60-150 189-266 (298)
143 1cyx_A CYOA; electron transpor 60.8 20 0.00069 32.6 7.0 62 214-296 42-103 (205)
144 1xwv_A DER F II; beta sheets, 58.9 24 0.00081 29.5 6.8 69 52-121 17-93 (129)
145 2gsm_B Cytochrome C oxidase su 56.7 37 0.0013 32.2 8.5 76 60-150 171-248 (262)
146 2x3c_A Toxic extracellular end 55.3 5.7 0.0002 39.6 2.6 26 106-131 95-125 (343)
147 2r39_A FIXG-related protein; s 51.3 42 0.0014 27.4 7.0 48 221-278 33-82 (118)
148 1nep_A EPV20, BNPC2, epididyma 50.8 29 0.00099 29.0 6.0 69 52-121 19-95 (130)
149 1yew_A Particulate methane mon 49.3 35 0.0012 33.7 6.9 16 105-120 319-334 (382)
150 1v54_B Cytochrome C oxidase po 46.6 39 0.0013 31.3 6.7 75 60-149 140-216 (227)
151 2gsm_B Cytochrome C oxidase su 41.0 53 0.0018 31.2 6.8 62 214-296 172-233 (262)
152 3hb3_B Cytochrome C oxidase su 39.5 1.1E+02 0.0038 29.5 8.9 76 452-559 188-264 (298)
153 2f1e_A Protein APAG; APAG prot 36.1 38 0.0013 28.3 4.3 48 71-119 34-87 (127)
154 2p9r_A Alpha-2-M, alpha-2-macr 35.0 1.2E+02 0.0042 23.5 7.2 71 216-292 12-84 (102)
155 2c34_A ICP, inhibitor of cyste 34.8 1E+02 0.0035 25.0 6.8 63 59-126 14-88 (116)
156 2xzz_A Protein-glutamine gamma 32.8 41 0.0014 26.8 3.9 52 69-126 23-78 (102)
157 1xvs_A Protein APAG; MCSG APC2 32.7 39 0.0013 28.2 3.8 48 71-119 33-86 (126)
158 4ubp_B Protein (urease (chain 32.0 53 0.0018 27.0 4.4 67 53-119 4-88 (126)
159 4ac7_B Urease subunit beta; hy 32.0 53 0.0018 27.0 4.4 67 53-119 4-88 (126)
160 1xq4_A Protein APAG; all beta 29.6 49 0.0017 28.1 4.0 46 71-117 38-89 (139)
161 1jer_A Cucumber stellacyanin; 28.9 79 0.0027 26.7 5.2 35 117-151 76-111 (138)
162 2h7w_A Chagasin; beta-strands, 28.4 2.4E+02 0.0081 23.4 8.1 64 59-126 32-103 (131)
163 1tza_A APAG protein, SOR45; st 27.9 43 0.0015 28.2 3.3 48 71-119 33-86 (134)
164 3kmh_A D-lyxose isomerase; cup 27.5 76 0.0026 29.4 5.1 49 60-115 129-183 (246)
165 2cio_B Inhibitor of cysteine p 27.3 1.7E+02 0.0058 23.9 6.9 25 59-83 12-36 (121)
166 1x9u_A Umecyanin; cupredoxin, 27.1 63 0.0022 26.4 4.2 33 528-560 73-106 (116)
167 1v54_B Cytochrome C oxidase po 24.6 1.1E+02 0.0037 28.3 5.8 62 214-296 141-202 (227)
168 1x9u_A Umecyanin; cupredoxin, 23.3 86 0.0029 25.6 4.3 35 116-151 72-108 (116)
169 1jer_A Cucumber stellacyanin; 23.1 1.1E+02 0.0037 25.8 5.0 33 529-561 77-110 (138)
170 2f1e_A Protein APAG; APAG prot 22.1 86 0.0029 26.1 4.1 49 222-273 32-84 (127)
171 1xvs_A Protein APAG; MCSG APC2 22.0 75 0.0026 26.4 3.7 49 222-273 31-83 (126)
172 1tza_A APAG protein, SOR45; st 20.3 80 0.0027 26.6 3.5 49 222-273 31-83 (134)
173 3es6_B Prolactin-inducible pro 20.1 2.8E+02 0.0096 22.5 6.8 56 62-120 16-74 (118)
174 1fft_B Ubiquinol oxidase; elec 20.1 69 0.0024 31.2 3.6 73 62-149 153-228 (315)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=1.1e-100 Score=838.32 Aligned_cols=512 Identities=30% Similarity=0.539 Sum_probs=406.8
Q ss_pred eeeEEEEEEEEEEEeccCceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CceeeeEcceeccCCCCCCCCCCccc
Q 008109 27 AITRHYKFNVELKNVTRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQ-HNISIHWHGIRQLRSGWADGPAYITQ 105 (577)
Q Consensus 27 ~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~tq 105 (577)
+++|+|+|+|++..+++||.++.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++|+||+|++||
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 46899999999999999999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCeEEEEEEECCCceeeEEeccccccc-ccceEeEEEeCCCCCCCCCCCCCCeeeEEeeccccccHHHHHHHhhh
Q 008109 106 CPIQTGQSYIYNFTIVGQRGTLWWHAHISWLR-STLYGPIIILPKRGIPYPFAKPYKEVPIVFGEWFKSDTEAIINQALQ 184 (577)
Q Consensus 106 ~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 184 (577)
|+|+||++|+|+|++ +++||||||||...|+ +||+|+|||++++....++. .|+|++|+++||++.+..+++.....
T Consensus 81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~~-~d~e~~l~l~Dw~~~~~~~~~~~~~~ 158 (552)
T 1aoz_A 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFH-YDGEINLLLSDWWHQSIHKQEVGLSS 158 (552)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSSC-CSEEEEEEEEEECSSCHHHHHHHTTS
T ss_pred CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCCC-CCccceEEeecccCCCHHHHHhhhhc
Confidence 999999999999998 8999999999998888 89999999999876544543 46899999999999988776543322
Q ss_pred CC-CCCCCCCeEEEcCcCCCCCCCCC-------------C-----ceeEEEEecCCEEEEEEEecCCCCcEEEEEcCcee
Q 008109 185 TG-GGPNVSDAYTFNGLPGPLYNCSA-------------K-----DTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTL 245 (577)
Q Consensus 185 ~~-~~~~~~~~~liNG~~~~~~~~~~-------------~-----~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~ 245 (577)
.. .....++.++|||+.. ++|+. . ..+.++|++|++|||||||+|+.+.+.|+|+||+|
T Consensus 159 ~~~~~~~~~~~~liNG~~~--~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~ 236 (552)
T 1aoz_A 159 KPIRWIGEPQTILLNGRGQ--FDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQL 236 (552)
T ss_dssp SSCCCCCSCSEEEETTBCC--SSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCE
T ss_pred ccccCCCCCCeEEECCccc--cCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEE
Confidence 11 1112468999999984 33432 1 23489999999999999999999999999999999
Q ss_pred EEEEeCCcccCceEEeEEEECCCceEEEEEEeC-CCCCCceEEEEeeecccCCCCCCCCceEEEEEEecCCCccccCCCC
Q 008109 246 TVVEVDAVYVKPFETETLVITPGQTTNVLLETK-PHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSI 324 (577)
Q Consensus 246 ~via~DG~~v~P~~~d~l~l~pgeR~dv~v~~~-~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~ 324 (577)
+||++||++++|+.++++.|+|||||||+|+++ +++ |+|||++.... +. .+.....|+|+|++... ..
T Consensus 237 ~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~--g~y~i~~~~~~-~~--~~~~~~~ail~y~~~~~------~~ 305 (552)
T 1aoz_A 237 LVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPS--ENYWVSVGTRA-RH--PNTPPGLTLLNYLPNSV------SK 305 (552)
T ss_dssp EEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTT--CCEEEEEEEES-SC--CCSCCEEEEEEETTSCT------TS
T ss_pred EEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCC--CCEEEEEEccc-CC--CCCccEEEEEEECCCCC------CC
Confidence 999999999999999999999999999999994 444 89999998754 21 23457899999987542 00
Q ss_pred CCCCCcCCCCCCCCCccccccccccccccCCCCCCCCCCCCCcceEEEEeccCccCCCCCCcccCCCCCeeEEEecceec
Q 008109 325 KKLPLFKPILPPLNDTNFVTNFVNKLRSLGSAQFPANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEASINNISF 404 (577)
Q Consensus 325 ~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~s~ 404 (577)
...... |..+.+++....+. ..++.+.... +...|...++++.+.+..... ...+.|+|||++|
T Consensus 306 ~p~~~~-p~~p~~~~~~~~~~--~~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~~------------~~~~~w~iNg~s~ 369 (552)
T 1aoz_A 306 LPTSPP-PQTPAWDDFDRSKN--FTYRITAAMG-SPKPPVKFNRRIFLLNTQNVI------------NGYVKWAINDVSL 369 (552)
T ss_dssp CCSSCC-CCCCCTTCHHHHHH--HHTTCCBCTT-CCCCCSSCSEEEEEEEEEEEE------------TTEEEEEETTEEE
T ss_pred CCCCCC-CCCCcccccccccc--ccccccccCC-CCCCCCCCcEEEEEEEeeccC------------CCeEEEEECCCcc
Confidence 111111 33343343322211 1233333222 333456678888777654321 1246799999999
Q ss_pred cCCchhhhhhhhcCCCCCcccCCCCCCCC-ccccCCCCCCCCccccCCceEEEecCCCEEEEEEeeCCCCC---CCCCce
Q 008109 405 VMPTTALLQAHFTGQSNGVYVPDFPTSPL-IPFNYTGNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILG---AENHPL 480 (577)
Q Consensus 405 ~~p~~~~l~~~~~~~~~g~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~---~~~HP~ 480 (577)
..|..|+|.+.+.+++ |.|..+++..++ ..|+.+.. ..+...+.++.++.++.|++|+|+|+|.+... .+.|||
T Consensus 370 ~~p~~P~L~~~~~~~~-g~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~ 447 (552)
T 1aoz_A 370 ALPPTPYLGAMKYNLL-HAFDQNPPPEVFPEDYDIDTP-PTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPW 447 (552)
T ss_dssp CCCSSCHHHHHHTTCT-TSSCCSCCCSCCCTTCCTTSC-CCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEE
T ss_pred CCCCCCHHHHHhhcCc-cccccCCCccccccccccccc-cccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCE
Confidence 9998898888777665 677766654433 12443321 11223455678899999999999999976432 467999
Q ss_pred eecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEecCceeEEEeeechhhhhcccEEEEEEecC
Q 008109 481 HLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVLDG 560 (577)
Q Consensus 481 HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~ 560 (577)
|||||+||||++|.|.|++ .....+|+.+|+|||||.|++++|++|||++||||.|+|||||+||++.|||++|.|.+
T Consensus 448 HLHGh~F~Vl~~g~G~~~~-~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~- 525 (552)
T 1aoz_A 448 HLHGHDFWVLGYGDGKFSA-EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGV- 525 (552)
T ss_dssp EETTCCEEEEEEEESSCCG-GGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECG-
T ss_pred EEcCCceEEEecccCccCc-ccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCc-
Confidence 9999999999999899887 44567889999999999999999999999999999999999999999999999998754
Q ss_pred CCCCCcCCCCCCCCCCC
Q 008109 561 KLPNQKLLPPPADLPKC 577 (577)
Q Consensus 561 ~~~~~~~~~~p~~~~~c 577 (577)
++++++|.++++|
T Consensus 526 ----~~~~~~P~~~~~C 538 (552)
T 1aoz_A 526 ----EKVGRIPTKALAC 538 (552)
T ss_dssp ----GGCCCCCHHHHSS
T ss_pred ----hhhccCCcchhhh
Confidence 2677789999999
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=1.3e-96 Score=798.98 Aligned_cols=464 Identities=32% Similarity=0.524 Sum_probs=373.7
Q ss_pred eeeeEEEEEEEEEEEeccCceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CceeeeEcceeccCCCCCCCCCCcc
Q 008109 26 LAITRHYKFNVELKNVTRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQ-HNISIHWHGIRQLRSGWADGPAYIT 104 (577)
Q Consensus 26 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~t 104 (577)
.+++|+|+|+|++..+++||+++.+|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||+++.+++|+||+|++|
T Consensus 64 ~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vT 143 (580)
T 3sqr_A 64 TGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVT 143 (580)
T ss_dssp CCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTT
T ss_pred CceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccc
Confidence 367899999999999999999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred ccccCCCCeEEEEEEECCCceeeEEeccccccc-ccceEeEEEeCCCCCCCCCCCCCCee-eEEeeccccccHHHHHHHh
Q 008109 105 QCPIQTGQSYIYNFTIVGQRGTLWWHAHISWLR-STLYGPIIILPKRGIPYPFAKPYKEV-PIVFGEWFKSDTEAIINQA 182 (577)
Q Consensus 105 q~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~~~~~~ 182 (577)
||+|+||++|+|+|++ .++||||||||...|+ +||+|+|||+++.+. .+|.|. +|+++||++....+++...
T Consensus 144 q~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~~-----~yD~d~~~l~l~Dw~~~~~~~~~~~~ 217 (580)
T 3sqr_A 144 QCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPATA-----DYDEDVGVIFLQDWAHESVFEIWDTA 217 (580)
T ss_dssp BCCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHHHHHHH
T ss_pred cCCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCcccC-----CCCccceEEEEEEEecCCHHHHHHHH
Confidence 9999999999999998 7999999999999888 799999999988653 347887 9999999999988776655
Q ss_pred hhCCCCCCCCCeEEEcCcCCCCCCCCC---------CceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEeCCc
Q 008109 183 LQTGGGPNVSDAYTFNGLPGPLYNCSA---------KDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAV 253 (577)
Q Consensus 183 ~~~~~~~~~~~~~liNG~~~~~~~~~~---------~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~ 253 (577)
... .+..++.++|||+.. +.|+. ...+.++|++|++|||||||+|....+.|+|+||+|+||++||.
T Consensus 218 ~~~--~~~~~d~~liNG~~~--~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~ 293 (580)
T 3sqr_A 218 RLG--APPALENTLMNGTNT--FDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLV 293 (580)
T ss_dssp TTS--CCCCBSEEEETTBCC--CCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTE
T ss_pred hcc--CCCCCceEEECCccc--CCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCc
Confidence 432 245679999999964 44542 24689999999999999999999999999999999999999999
Q ss_pred ccCceEEeEEEECCCceEEEEEEeCCCCCCceEEEEeeecccCCCCCCCCceEEEEEEecCCCccccCCCCCCCCCcCCC
Q 008109 254 YVKPFETETLVITPGQTTNVLLETKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSIKKLPLFKPI 333 (577)
Q Consensus 254 ~v~P~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~ 333 (577)
+++|+.+++|.|+|||||||+|+++++. |+|||++.....|..........|||+|.+... . . |.
T Consensus 294 ~v~P~~~~~l~i~pGqRydVlv~a~~~~--g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~--------~-~----P~ 358 (580)
T 3sqr_A 294 PIVPYTTDTLLIGIGQRYDVIVEANAAA--DNYWIRGNWGTTCSTNNEAANATGILRYDSSSI--------A-N----PT 358 (580)
T ss_dssp EEEEEEESSEEECTTCEEEEEEECCSCS--SEEEEECCCCTTTSCBTTGGGCEEEEESSTTCC--------C-C----CC
T ss_pred cCCceEeeEEEEccceEEEEEEEeCCCC--CeEEEEEecccccCccCCCCceEEEEEECCCCC--------C-C----CC
Confidence 9999999999999999999999999875 999999987655532233346899999976542 1 1 11
Q ss_pred CCCCCCcccccc-ccccccccCCCCCCCCCCCCCcceEEEEeccCccCCCCCCcccCCCCCeeEEEecceeccC-Cchhh
Q 008109 334 LPPLNDTNFVTN-FVNKLRSLGSAQFPANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEASINNISFVM-PTTAL 411 (577)
Q Consensus 334 ~p~~~~~~~~~~-~~~~l~~l~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~s~~~-p~~~~ 411 (577)
.+.+........ ....|.++. +...|...+..+.+.++ .+..+.|++||++|.. +..|.
T Consensus 359 ~~~~~~~~~~~~~~~~~L~P~~----~~~~~~~~~~~~~l~~~---------------~~~~~~w~iN~~s~~~~~~~P~ 419 (580)
T 3sqr_A 359 SVGTTPRGTCEDEPVASLVPHL----ALDVGGYSLVDEQVSSA---------------FTNYFTWTINSSSLLLDWSSPT 419 (580)
T ss_dssp CCCCCCCCCSCCSCGGGCCBSS----CCBCCSEEEEEEEEEEE---------------ESSSEEEEETTBCCCCCTTSCH
T ss_pred CCCCCccchhhcccccccccCC----CCCCCCccceEEEEEec---------------cCCceeEEECCEecccCCCCCc
Confidence 111111111100 012333321 22233333433433332 2245789999999975 46676
Q ss_pred hhhhhcCCCCCcccCCCCCCCCccccCCCCCCCCccccCCceEEEec----CCCEEEEEEeeCCCCCCCCCceeecCCce
Q 008109 412 LQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVVLP----FNTSVELIMQDTSILGAENHPLHLHGYNF 487 (577)
Q Consensus 412 l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~v~~~l~N~~~~~~~~HP~HlHG~~F 487 (577)
|...+.+ . .+|+. ..+++.++ .|++|||+|+|.+.. .+.||||||||+|
T Consensus 420 L~~~~~g----~--~~~~~--------------------~~~~~~~~~~~~~~~~VeiVi~n~~~~-~~~HP~HLHGh~F 472 (580)
T 3sqr_A 420 TLKIFNN----E--TIFPT--------------------EYNVVALEQTNANEEWVVYVIEDLTGF-GIWHPIHLHGHDF 472 (580)
T ss_dssp HHHHHTT----C--CCCCG--------------------GGCEEEECC----CCEEEEEEEECSSS-CCCEEEEESSCCE
T ss_pred hhhhhcC----C--ccCCC--------------------CcceeecccccCCCcEEEEEEeCCCcc-ccceeeEecCceE
Confidence 6654432 1 23321 13344554 699999999997532 4799999999999
Q ss_pred EEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEecCceeEEEeeechhhhhcccEEEEEEecC
Q 008109 488 FVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVLDG 560 (577)
Q Consensus 488 ~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~ 560 (577)
|||++|.|.|++...+..+|+.||++||||.|++++|++|||++||||.|+|||||+||++.||+++|.+.+.
T Consensus 473 ~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~~ 545 (580)
T 3sqr_A 473 FIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQS 545 (580)
T ss_dssp EEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESGG
T ss_pred EEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECHH
Confidence 9999999999987767789999999999999999999999999999999999999999999999999987543
No 3
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.4e-95 Score=791.19 Aligned_cols=485 Identities=28% Similarity=0.469 Sum_probs=364.8
Q ss_pred HHHhcccceeeeeEEEEEEEEEEEeccCce-eeEEEEECCCCCCCeEEEecCCEEEEEEEeCCC-----CceeeeEccee
Q 008109 17 SLCLLPESVLAITRHYKFNVELKNVTRLCH-TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQ-----HNISIHWHGIR 90 (577)
Q Consensus 17 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~-~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~-----~~~~iH~HG~~ 90 (577)
+++++..++++...+|+|+|++..++++|+ .+.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||++
T Consensus 11 ~~~~~~~~~~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~ 90 (521)
T 1v10_A 11 VVLSLTSLSLAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFF 90 (521)
T ss_dssp -----------CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCC
T ss_pred HHHHhhhhhcccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCee
Confidence 444444555678889999999999999999 999999999999999999999999999999999 99999999999
Q ss_pred ccCCCCCCCCCCccccccCCCCeEEEEEEECCCceeeEEeccccccc-ccceEeEEEeCCCCC-CCCCCCCCCeeeEEee
Q 008109 91 QLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHISWLR-STLYGPIIILPKRGI-PYPFAKPYKEVPIVFG 168 (577)
Q Consensus 91 ~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~ 168 (577)
+.+.+|+||+|++|||+|+||++|+|+|++++++||||||||.+.|+ +||+|+|||+++.+. ..++...++|++|+++
T Consensus 91 ~~~~~~~DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~ 170 (521)
T 1v10_A 91 QAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIA 170 (521)
T ss_dssp CTTCGGGSCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEE
T ss_pred ccCCCccCCCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEc
Confidence 99889999999999999999999999999778999999999999888 899999999987642 1223333479999999
Q ss_pred ccccccHHHHHHHhhhCCCCCCCCCeEEEcCcCCCCCCCC--CCceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeE
Q 008109 169 EWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCS--AKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLT 246 (577)
Q Consensus 169 d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~--~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~ 246 (577)
||+++...++... .+.....++.++|||+.. +.|+ ....+.++|++|++|||||||+|+.+.+.|+|+||+|+
T Consensus 171 D~~~~~~~~~~~~---~~~~~~~~d~~liNG~~~--~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~ 245 (521)
T 1v10_A 171 DWYHSLSTVLFPN---PNKAPPAPDTTLINGLGR--NSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMT 245 (521)
T ss_dssp EECSSCCC----------CCCSCCSEEEETTBCC--CSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEE
T ss_pred ccccCCHHHHhhc---cCCCCCCCCEEEECCccc--CCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEE
Confidence 9999876654321 112234579999999974 4554 23458999999999999999999999999999999999
Q ss_pred EEEeCCcccCceEEeEEEECCCceEEEEEEeCCCCCCceEEEEeeecccCCCCCCCCceEEEEEEecCCCccccCCCCCC
Q 008109 247 VVEVDAVYVKPFETETLVITPGQTTNVLLETKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSIKK 326 (577)
Q Consensus 247 via~DG~~v~P~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~ 326 (577)
||++||.+++|+.++++.|+|||||||+|++++++ |+|||++.....+. .+......++|+|++... .
T Consensus 246 vi~~DG~~~~p~~~~~l~l~pgqR~dvlv~~~~~~--g~y~i~~~~~~~~~-~~~~~~~~ail~y~~~~~--------~- 313 (521)
T 1v10_A 246 VIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAV--GNYWIRANPSNGRN-GFTGGINSAIFRYQGAAV--------A- 313 (521)
T ss_dssp EEEETTEEEEEEEESBEEECTTCEEEEEEECCSCS--SEEEEEEEESSSSC-SCGGGTTEEEEEETTCCS--------C-
T ss_pred EEecCCccccceeeeeEEEcccceEEEEEEcCCCC--Cceeeeeccccccc-cCCCCceeEEEEECCCCC--------C-
Confidence 99999999999999999999999999999999865 99999998653322 112223469999987542 1
Q ss_pred CCCcCCCCCCCCCccccccccccccccCCCCCCC-CCCCCCcceEEEEeccCccCCCCCCcccCCCCCeeEEEecceecc
Q 008109 327 LPLFKPILPPLNDTNFVTNFVNKLRSLGSAQFPA-NVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEASINNISFV 405 (577)
Q Consensus 327 ~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~~-~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~s~~ 405 (577)
.+.. +.. +.... ...+++++.....+. ..+...+.++.+++++ ++..+.|+|||++|.
T Consensus 314 ~p~~----~~~-~~~~~--~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~--------------~~~~~~~~iNg~~~~ 372 (521)
T 1v10_A 314 EPTT----SQN-SGTAL--NEANLIPLINPGAPGNPVPGGADINLNLRIGR--------------NATTADFTINGAPFI 372 (521)
T ss_dssp CCCC----CCC-CSCBC--CGGGCCBSSCCCCSSCSSTTCSSEEEECCEEC--------------CSSSSCCEESSCCCC
T ss_pred CCCC----CCC-ccccc--chhhcccCCcccCCCcccCCcceEEEEEEEec--------------CCceeEEEECCCccc
Confidence 1111 100 00000 012344443222221 1122334443332211 222246899999999
Q ss_pred CCchhhhhhhhcCCCCCcccCCCCCCCCccccCCCCCCCCccccCCceEEEecCCCEEEEEEeeCCCCCCCCCceeecCC
Q 008109 406 MPTTALLQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLHGY 485 (577)
Q Consensus 406 ~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~ 485 (577)
.+..|.+.+...+.. ...+ ...++.++.++.|++|+|+++| . +.||||||||
T Consensus 373 ~~~~P~l~~~~~g~~---~~~~--------------------~~~~~~~~~v~~g~~vei~l~N-~----~~HP~HLHGh 424 (521)
T 1v10_A 373 PPTVPVLLQILSGVT---NPND--------------------LLPGGAVISLPANQVIEISIPG-G----GNHPFHLHGH 424 (521)
T ss_dssp CCSSCHHHHHHHTCC---CGGG--------------------SSSTTTEEEECTTCEEEEEEEC-C----BSCEEEESSC
T ss_pred CCCCchhhhhhcCCc---cccc--------------------CCCCceEEEecCCCEEEEEEcC-C----CCCCEEEccc
Confidence 887776655443210 0011 1234678899999999999999 2 7899999999
Q ss_pred ceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEe-CCCcEEEEEEEecCceeEEEeeechhhhhcccEEEEEEecCCCCC
Q 008109 486 NFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGV-PSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVLDGKLPN 564 (577)
Q Consensus 486 ~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v-p~~~~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~ 564 (577)
+||||+++.+. .+++.+|.|||||.| ++++|++|||++||||.|+|||||++|++.|||++|.|.+.. .
T Consensus 425 ~F~Vl~~~~~~--------~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~--~ 494 (521)
T 1v10_A 425 NFDVVRTPGSS--------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPN--I 494 (521)
T ss_dssp CEEEEECTTCS--------CCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGG--H
T ss_pred eEEEEecCCCC--------ccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcc--h
Confidence 99999997542 357789999999999 899999999999999999999999999999999999986543 3
Q ss_pred CcCCCCC-CCCCCC
Q 008109 565 QKLLPPP-ADLPKC 577 (577)
Q Consensus 565 ~~~~~~p-~~~~~c 577 (577)
.++.++| .+.+.|
T Consensus 495 ~~~~~~p~~~~~~C 508 (521)
T 1v10_A 495 PIANAISPAWDDLC 508 (521)
T ss_dssp HHHSCCCHHHHTHH
T ss_pred hhccCCChHHhhhc
Confidence 3444444 456777
No 4
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-94 Score=780.77 Aligned_cols=477 Identities=27% Similarity=0.411 Sum_probs=370.5
Q ss_pred eeEEEEEEEEEEEeccCc-eeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CceeeeEcceeccCCCCCCCCCCccc
Q 008109 28 ITRHYKFNVELKNVTRLC-HTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQ-HNISIHWHGIRQLRSGWADGPAYITQ 105 (577)
Q Consensus 28 ~~~~~~l~~~~~~~~~~g-~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~tq 105 (577)
++|+|+|+|++..+++|| .++.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++..++|+||+|++||
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 478999999999999999 8999999999999999999999999999999998 99999999999999899999999999
Q ss_pred cccCCCCeEEEEEEECCCceeeEEeccccccc-ccceEeEEEeCCCCCCCCCCCCCCeeeEEeeccccccHHHHHHHhhh
Q 008109 106 CPIQTGQSYIYNFTIVGQRGTLWWHAHISWLR-STLYGPIIILPKRGIPYPFAKPYKEVPIVFGEWFKSDTEAIINQALQ 184 (577)
Q Consensus 106 ~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 184 (577)
|+|+||++|+|+|++++++||||||||.+.|+ +||+|+|||+++.+ |+ .+|+|++|+++||+++...++....+.
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PY-DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CS-CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CC-CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 99999999999999866999999999999988 89999999999864 22 458899999999999988877655432
Q ss_pred C---CCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEeCCcccCceEEe
Q 008109 185 T---GGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETE 261 (577)
Q Consensus 185 ~---~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d 261 (577)
. .+....++.+||||+.. +.++|++||+|||||||+|+.+.+.|+|+||+|+||++||++++|+.++
T Consensus 157 ~~~~~g~~~~~d~~liNG~~~----------~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~ 226 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTMN----------LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTD 226 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBSS----------CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEES
T ss_pred cccCCCCCCCCceEEECCCCc----------eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEec
Confidence 1 12334679999999963 6899999999999999999999999999999999999999999999999
Q ss_pred EEEECCCceEEEEEEeCCCCCCceEEEEeeecccCCC---CCCCCceEEEEEEecCCCccccCCCCCCCCCcCCCCCC-C
Q 008109 262 TLVITPGQTTNVLLETKPHYPSATFFMTARPYVTGLG---TFDNSTVAGILEYEKPLNFIHSGNSIKKLPLFKPILPP-L 337 (577)
Q Consensus 262 ~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~-~ 337 (577)
+|.|+|||||||+|++++.+ +++|||++.....+.. ........++|+|.+... . ..+... +..+. .
T Consensus 227 ~l~l~~gqR~dvlv~~~~~~-~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~------~-p~~~~~-~~~~~~~ 297 (534)
T 1zpu_A 227 MLYITVAQRYTVLVHTKNDT-DKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAA------L-PTQNYV-DSIDNFL 297 (534)
T ss_dssp CEEECTTCEEEEEEECCSCS-SCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSC------B-CCCCCC-SCSSCSC
T ss_pred eEEECccceEEEEEEcCCCC-CCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCC------C-CCCCcc-ccccccc
Confidence 99999999999999998753 3789999876433211 122346789999986531 0 101001 11111 0
Q ss_pred CCccccccccccccccCCCCCCCCCCCCCcceEEEEeccCccCCCCCCcccCCCCCeeEEEecceeccCCchhhhhhhhc
Q 008109 338 NDTNFVTNFVNKLRSLGSAQFPANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEASINNISFVMPTTALLQAHFT 417 (577)
Q Consensus 338 ~~~~~~~~~~~~l~~l~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~s~~~p~~~~l~~~~~ 417 (577)
. ...++++... ..+...++++.+.+.+... .++ ...|++||++|..|.+|.|...+.
T Consensus 298 ~--------~~~l~p~~~~----~~~~~~~~~~~l~~~~~~~----------~~~-~~~~~iNg~s~~~~~~P~L~~~~~ 354 (534)
T 1zpu_A 298 D--------DFYLQPYEKE----AIYGEPDHVITVDVVMDNL----------KNG-VNYAFFNNITYTAPKVPTLMTVLS 354 (534)
T ss_dssp C--------GGGCCBSSCC----CCCCSCSEEEEEEEEEEEC----------TTS-CEEEEETTBCCCCCSSCHHHHHTT
T ss_pred c--------cccceeCCCC----CCCCCCCeEEEEEEEeecc----------CCc-eeEEEECCCcccCCCCCceeeecc
Confidence 0 0123333211 2234567777776654321 122 235899999999988876654332
Q ss_pred CCCCCcccCCCCCCCCccccCCCCCCCCccccCCceEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccC--
Q 008109 418 GQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFG-- 495 (577)
Q Consensus 418 ~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g-- 495 (577)
. +.+. .. +.. ...++.++.++.|++|+|+|+|.+ .+.||||||||+||||+++.+
T Consensus 355 ~---~~~~----~~-~~~------------~~~~~~~~~~~~g~~v~ivi~N~~---~~~HP~HLHGh~F~Vl~~~~~~~ 411 (534)
T 1zpu_A 355 S---GDQA----NN-SEI------------YGSNTHTFILEKDEIVEIVLNNQD---TGTHPFHLHGHAFQTIQRDRTYD 411 (534)
T ss_dssp S---GGGT----TC-GGG------------GCSSSCEEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEECCCCC
T ss_pred c---Cccc----CC-Ccc------------cCCCceEEEeCCCCEEEEEEeCCC---CCCCCeEecCCceEEEeecCCcc
Confidence 1 2111 11 111 123467789999999999999975 479999999999999999864
Q ss_pred --------cCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEecCceeEEEeeechhhhhcccEEEEEEecCCCCCCc-
Q 008109 496 --------NFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVLDGKLPNQK- 566 (577)
Q Consensus 496 --------~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~~~- 566 (577)
.|++.. ... ...+|.|||||.|++++|++|||++||||.|+|||||+||++.|||++|.|.+.. .++
T Consensus 412 ~~~~G~p~~~~~~~-~~~-~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~~--~~~~ 487 (534)
T 1zpu_A 412 DALGEVPHSFDPDN-HPA-FPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDPFG--IQDA 487 (534)
T ss_dssp GGGTCCCCCCBTTB-CCC-CCSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHH--HHHC
T ss_pred ccccCcccccCccc-ccc-ccCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECccc--cccc
Confidence 344321 112 2468999999999999999999999999999999999999999999999886532 333
Q ss_pred --CCCCCCCCCCC
Q 008109 567 --LLPPPADLPKC 577 (577)
Q Consensus 567 --~~~~p~~~~~c 577 (577)
+..|+.+.+.|
T Consensus 488 ~~~~~p~~~~~~C 500 (534)
T 1zpu_A 488 HSQQLSENHLEVC 500 (534)
T ss_dssp GGGSCCHHHHHHH
T ss_pred cccCCChhHhhhh
Confidence 34444444554
No 5
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=6.5e-94 Score=769.56 Aligned_cols=456 Identities=30% Similarity=0.536 Sum_probs=358.1
Q ss_pred EEEEEEEEEEEeccCceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCCC-----ceeeeEcceeccCCCCCCCCCCcc
Q 008109 30 RHYKFNVELKNVTRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQH-----NISIHWHGIRQLRSGWADGPAYIT 104 (577)
Q Consensus 30 ~~~~l~~~~~~~~~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~-----~~~iH~HG~~~~~~~~~DGv~~~t 104 (577)
.+|+|+|++..+++||+++.+++|||++|||+||+++||+|+|+|+|+|++ +++|||||+++..++|+||++++|
T Consensus 4 ~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 83 (499)
T 3pxl_A 4 PVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFIN 83 (499)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred ceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 579999999999999999999999999999999999999999999999984 799999999999999999999999
Q ss_pred ccccCCCCeEEEEEEECCCceeeEEeccccccc-ccceEeEEEeCCCCC-CCCCCCCCCeeeEEeeccccccHHHHHHHh
Q 008109 105 QCPIQTGQSYIYNFTIVGQRGTLWWHAHISWLR-STLYGPIIILPKRGI-PYPFAKPYKEVPIVFGEWFKSDTEAIINQA 182 (577)
Q Consensus 105 q~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 182 (577)
||+|+||++|+|+|++++++||||||||...|+ +||+|+|||+++.+. ..++...+.|++|+++||+++....
T Consensus 84 q~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~----- 158 (499)
T 3pxl_A 84 QCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL----- 158 (499)
T ss_dssp BCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT-----
T ss_pred cCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc-----
Confidence 999999999999999878999999999999888 899999999987642 1123333567899999999876532
Q ss_pred hhCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEeCCcccCceEEeE
Q 008109 183 LQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETET 262 (577)
Q Consensus 183 ~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~ 262 (577)
.+..+..+++++|||+.. ++.|.....+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.+++|+.+++
T Consensus 159 --~~~~p~~~d~~liNG~~~-~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~ 235 (499)
T 3pxl_A 159 --GPRFPGGADATLINGKGR-APSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDS 235 (499)
T ss_dssp --SCSSCSSCSEEEETTBCC-CTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESB
T ss_pred --ccCCCCCCcEEEECCCCc-CCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEeee
Confidence 233445779999999953 33334446789999999999999999999999999999999999999999999999999
Q ss_pred EEECCCceEEEEEEeCCCCCCceEEEEeeecccCCCCCCCCceEEEEEEecCCCccccCCCCCCCCCcCCCCCCCCCccc
Q 008109 263 LVITPGQTTNVLLETKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSIKKLPLFKPILPPLNDTNF 342 (577)
Q Consensus 263 l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~ 342 (577)
|.|+|||||||+|+++++. |+|||++.....+. .+......|+|+|++... . .+.. +..+...
T Consensus 236 l~i~pGqR~dvlv~~~~~~--g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~--------~-~p~~-~~~~~~~---- 298 (499)
T 3pxl_A 236 IQIFAAQRYSFVLDANQAV--DNYWIRANPNFGNV-GFDGGINSAILRYDGAPA--------V-EPTT-NQTTSVK---- 298 (499)
T ss_dssp EEECTTCEEEEEEECCSCS--SEEEEEEEESSSSC-SCGGGTTEEEEEETTSCS--------S-CCCC-CCCCCSS----
T ss_pred EEECCCcEEEEEEECCCCC--ceEEEEEecccCcc-ccCCCceEEEEEeCCCCC--------C-CCCC-CCCCCCc----
Confidence 9999999999999999876 89999998644332 122234589999987542 1 1111 1001100
Q ss_pred cccccccccccCCCCCCC-CCCCCCcceEEEEeccCccCCCCCCcccCCCCCeeEEEecceeccCCchhhhhhhhcCCCC
Q 008109 343 VTNFVNKLRSLGSAQFPA-NVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEASINNISFVMPTTALLQAHFTGQSN 421 (577)
Q Consensus 343 ~~~~~~~l~~l~~~~~~~-~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~s~~~p~~~~l~~~~~~~~~ 421 (577)
.....+|+++.....|. ..+...|+++.+.+++ ++. .|+|||++|..|+.|.|.+.+.+
T Consensus 299 -~~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~--------------~~~--~w~iNg~s~~~~~~P~L~~~~~g--- 358 (499)
T 3pxl_A 299 -PLNEVDLHPLVSTPVPGAPSSGGVDKAINMAFNF--------------NGS--NFFINGASFVPPTVPVLLQILSG--- 358 (499)
T ss_dssp -BCCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEE--------------CSS--CEEETTBCCCCCSSCHHHHHHTT---
T ss_pred -ccccccccccccccCCCcccCCCCcEEEEEEEEe--------------cCc--EEEEcCEecCCCCCchhhhhhcC---
Confidence 01122455553322221 1234566666555432 112 58999999998888766554422
Q ss_pred CcccCCCCCCCCccccCCCCCCCCccccCCceEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCC
Q 008109 422 GVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNK 501 (577)
Q Consensus 422 g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~ 501 (577)
.+... . ....+.++.++.|++|+|+|+|.+....+.||||||||+|+||+.+ |
T Consensus 359 -~~~~~--~-----------------~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~-g------ 411 (499)
T 3pxl_A 359 -AQTAQ--D-----------------LLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSA-G------ 411 (499)
T ss_dssp -CCSTT--T-----------------SSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECT-T------
T ss_pred -Ccccc--c-----------------cCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEecc-C------
Confidence 11100 0 1123568899999999999995322345899999999999999864 2
Q ss_pred CCCCCCCCCCCeeeeEEeCC---CcEEEEEEEecCceeEEEeeechhhhhcccEEEEEEe
Q 008109 502 DPAKFNLVDPIERNTVGVPS---GGWVAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 502 ~~~~~~~~~p~~rDTv~vp~---~~~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 558 (577)
...+|+.+|++||||.|++ |+|++|||++||||.|+|||||+||++.||+++|.+.
T Consensus 412 -~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~ 470 (499)
T 3pxl_A 412 -STVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAED 470 (499)
T ss_dssp -CCCCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEES
T ss_pred -CcccccCCCCccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEEEC
Confidence 2457889999999999997 9999999999999999999999999999999999654
No 6
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=1.1e-93 Score=767.90 Aligned_cols=457 Identities=28% Similarity=0.505 Sum_probs=356.9
Q ss_pred eEEEEEEEEEEEeccCceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCCC-----ceeeeEcceeccCCCCCCCCCCc
Q 008109 29 TRHYKFNVELKNVTRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQH-----NISIHWHGIRQLRSGWADGPAYI 103 (577)
Q Consensus 29 ~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~-----~~~iH~HG~~~~~~~~~DGv~~~ 103 (577)
-.+|+|+|++..+++||+++.+++|||++|||+||+++||+|+|+|+|+|++ +++|||||+++..++|+||++++
T Consensus 4 ~~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 83 (495)
T 3t6v_A 4 GPVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFI 83 (495)
T ss_dssp CSEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred CCeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 3579999999999999999999999999999999999999999999999985 79999999999999999999999
Q ss_pred cccccCCCCeEEEEEEECCCceeeEEeccccccc-ccceEeEEEeCCCCC-CCCCCCCCCeeeEEeeccccccHHHHHHH
Q 008109 104 TQCPIQTGQSYIYNFTIVGQRGTLWWHAHISWLR-STLYGPIIILPKRGI-PYPFAKPYKEVPIVFGEWFKSDTEAIINQ 181 (577)
Q Consensus 104 tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 181 (577)
|||+|+||++|+|+|++++++||||||||.+.|+ +||+|+|||+++.+. ..++...+.|++|+++||+++....+
T Consensus 84 tq~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~--- 160 (495)
T 3t6v_A 84 TQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM--- 160 (495)
T ss_dssp TBCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS---
T ss_pred ccCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh---
Confidence 9999999999999999878999999999999888 999999999987652 12233335678999999999866431
Q ss_pred hhhCCCCCCCCCeEEEcCcCCCCCCCC--CCceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEeCCcccCceE
Q 008109 182 ALQTGGGPNVSDAYTFNGLPGPLYNCS--AKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFE 259 (577)
Q Consensus 182 ~~~~~~~~~~~~~~liNG~~~~~~~~~--~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~ 259 (577)
.+..+..+++++|||+.. +.|. ....+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.+++|+.
T Consensus 161 ---~~~~p~~~d~~liNG~g~--~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~ 235 (495)
T 3t6v_A 161 ---GAGGAITADSTLIDGLGR--THVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELT 235 (495)
T ss_dssp ---CSSSCCCCSEEEETTBCC--BSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEE
T ss_pred ---ccCCCCCCcEEEECCcCc--CCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEE
Confidence 233445789999999953 3333 235689999999999999999999999999999999999999999999999
Q ss_pred EeEEEECCCceEEEEEEeCCCCCCceEEEEeeecccCCCCCCCCceEEEEEEecCCCccccCCCCCCCCCcCCCCCCCCC
Q 008109 260 TETLVITPGQTTNVLLETKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSIKKLPLFKPILPPLND 339 (577)
Q Consensus 260 ~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~ 339 (577)
+++|.|+|||||||+|+++++. |+|||++.....+. .+.+....|+|+|++... . .+.. + .+.. .
T Consensus 236 ~~~l~i~pGqR~dvlv~~~~~~--g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~--------~-~p~~-~-~~~~-~ 300 (495)
T 3t6v_A 236 VDEIQIFAAQRYSFVLNANQPV--GNYWIRANPNSGGE-GFDGGINSAILRYDGATT--------A-DPVT-V-ASTV-H 300 (495)
T ss_dssp ESBEEECTTCEEEEEEECCSCS--SEEEEEEEESSSSC-SCGGGTTEEEEEETTSCS--------S-CCCC-C-CCSS-C
T ss_pred eeeEEEcCceEEEEEEECCCCC--ceEEEEEecccCcc-ccCCCceEEEEEECCCCC--------C-CCCC-C-CCCC-C
Confidence 9999999999999999999876 89999998644332 122234579999986542 1 1111 0 0000 0
Q ss_pred ccccccccccccccCCCCCCC-CCCCCCcceEEEEeccCccCCCCCCcccCCCCCeeEEEecceeccCCchhhhhhhhcC
Q 008109 340 TNFVTNFVNKLRSLGSAQFPA-NVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEASINNISFVMPTTALLQAHFTG 418 (577)
Q Consensus 340 ~~~~~~~~~~l~~l~~~~~~~-~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~s~~~p~~~~l~~~~~~ 418 (577)
. .......|+++.....+. ..+...|+++.+.+++ ++. .|+|||++|..|+.|.|.+...+
T Consensus 301 ~--~~~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~--------------~~~--~w~iNg~s~~~~~~P~L~~~~~g 362 (495)
T 3t6v_A 301 T--KCLIETDLHPLSRNGVPGNPHQGGADCNLNLSLGF--------------ACG--NFVINGVSFTPPTVPVLLQICSG 362 (495)
T ss_dssp S--SBCCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEE--------------ETT--EEEETTBCCCCCSSCHHHHHHTT
T ss_pred c--cccccccccccccccCCCccCCCCCcEEEEEEEEe--------------cCc--EEEEcCEecCCCCCcchhhhhcC
Confidence 0 001112355543322221 1233456666554432 112 58999999998887766554322
Q ss_pred CCCCcccCCCCCCCCccccCCCCCCCCccccCCceEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCC
Q 008109 419 QSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFD 498 (577)
Q Consensus 419 ~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~ 498 (577)
.+... . ....+.++.++.|++|+|+|+|.. ..+.||||||||+|+||+.+.
T Consensus 363 ----~~~~~--~-----------------~~~~~~v~~~~~g~~V~ivl~~n~--~~~~HP~HLHGh~F~vl~~~g---- 413 (495)
T 3t6v_A 363 ----ANTAA--D-----------------LLPSGSVISLPSNSTIEIALPAGA--AGGPHPFHLHGHDFAVSESAS---- 413 (495)
T ss_dssp ----CCSST--T-----------------SSSTTSEEEECTTCEEEEEEECCS--SSCCCEEEETTCCEEEEECTT----
T ss_pred ----CcCcc--c-----------------ccCCcceEEecCCCEEEEEEccCC--CCCCcceeecCCcEEEEecCC----
Confidence 11100 0 112356889999999999998421 358999999999999998642
Q ss_pred CCCCCCCCCCCCCCeeeeEEeCC-CcEEEEEEEecCceeEEEeeechhhhhcccEEEEEEec
Q 008109 499 PNKDPAKFNLVDPIERNTVGVPS-GGWVAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVLD 559 (577)
Q Consensus 499 ~~~~~~~~~~~~p~~rDTv~vp~-~~~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~ 559 (577)
...+|+.+|++||||.|++ |+|++|||++||||.|+|||||++|++.||+++|.+.+
T Consensus 414 ----~~~~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~ 471 (495)
T 3t6v_A 414 ----NSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDI 471 (495)
T ss_dssp ----CCCCCSSSCCEESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEEETH
T ss_pred ----CCCcccCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECh
Confidence 2357888999999999997 99999999999999999999999999999999996543
No 7
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=8.1e-92 Score=767.28 Aligned_cols=486 Identities=25% Similarity=0.436 Sum_probs=367.4
Q ss_pred eeeeeEEEEEEEEEEE--eccCcee-eEEEEECCCCCCCeEEEecCCEEEEEEEeCC-CCceeeeEcceeccCCCCCCCC
Q 008109 25 VLAITRHYKFNVELKN--VTRLCHT-KTLVSVNGQFPGPRIVAREGDRLLIKVVNHV-QHNISIHWHGIRQLRSGWADGP 100 (577)
Q Consensus 25 ~~~~~~~~~l~~~~~~--~~~~g~~-~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l-~~~~~iH~HG~~~~~~~~~DGv 100 (577)
..+++++|+|+|++.. ++++|+. +.+|+|||++|||+||+++||+|+|+|+|+| +++++|||||+++.+.+|+||+
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~ 108 (559)
T 2q9o_A 29 DTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGA 108 (559)
T ss_dssp CCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC
T ss_pred CCCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCC
Confidence 3577899999999998 8899998 9999999999999999999999999999999 6899999999999988999999
Q ss_pred CCccccccCC-CCeEEEEEEECCCceeeEEeccccccc-ccceEeEEEeCCCCCCCCCCCCCCee-eEEeeccccccHHH
Q 008109 101 AYITQCPIQT-GQSYIYNFTIVGQRGTLWWHAHISWLR-STLYGPIIILPKRGIPYPFAKPYKEV-PIVFGEWFKSDTEA 177 (577)
Q Consensus 101 ~~~tq~~i~P-G~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~ 177 (577)
|++|||+|+| |++|+|+|++ .++||||||||...|+ +||+|+|||+++... .+|.|. +|+++||++++..+
T Consensus 109 ~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~-----~~d~d~~~l~l~Dw~~~~~~~ 182 (559)
T 2q9o_A 109 NGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPASL-----PYDIDLGVFPITDYYYRAADD 182 (559)
T ss_dssp BTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHH
T ss_pred CccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCcC-----CCcccceEEEEeccccCCHHH
Confidence 9999999999 9999999998 7899999999998887 899999999998653 347787 99999999998877
Q ss_pred HHHHhhhCCCCCCCCCeEEEcCcCCCCCCCCC-CceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEeCCcccC
Q 008109 178 IINQALQTGGGPNVSDAYTFNGLPGPLYNCSA-KDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVK 256 (577)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~-~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~ 256 (577)
+..... .+.+..++.++|||+... .|.. ...+.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+++
T Consensus 183 ~~~~~~--~~~~~~~d~~liNG~~~~--~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~ 258 (559)
T 2q9o_A 183 LVHFTQ--NNAPPFSDNVLINGTAVN--PNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVN 258 (559)
T ss_dssp HHHHHT--TSCCCCBSEEEETTBCBC--TTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEE
T ss_pred Hhhhhh--cCCCCccceeEECCcccc--CcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccC
Confidence 654322 223446799999999854 3432 24578999999999999999999999999999999999999999999
Q ss_pred ceEEeEEEECCCceEEEEEEeCCCCCCceEEEEeee--cccCCCCCCCCceEEEEEEecCCCccccCCCCCCCCCcCCCC
Q 008109 257 PFETETLVITPGQTTNVLLETKPHYPSATFFMTARP--YVTGLGTFDNSTVAGILEYEKPLNFIHSGNSIKKLPLFKPIL 334 (577)
Q Consensus 257 P~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~--~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~ 334 (577)
|+.++++.|+|||||||+|++++++ |+|||++.. ...+. ........++|+|.+... . .+.. +..
T Consensus 259 p~~~~~l~l~pgeR~dvlv~~~~~~--g~y~i~a~~~~~~~~~-~~~~~~~~ail~y~~~~~--------~-~P~~-~~~ 325 (559)
T 2q9o_A 259 AMTVDSLFLAVGQRYDVVIDASRAP--DNYWFNVTFGGQAACG-GSLNPHPAAIFHYAGAPG--------G-LPTD-EGT 325 (559)
T ss_dssp EEEESCEEECTTCEEEEEEECCSCS--SEEEEEEECCGGGTTC-CBSSSCCEEEEEETTSCC--------S-CCCC-CCC
T ss_pred ceEeCeEEEccEEEEEEEEECCCCC--CcEEEEEEeccccccC-CCCCCceeEEEEECCCCC--------C-CCCC-CCC
Confidence 9999999999999999999998865 899999986 32221 123345689999986542 1 1111 001
Q ss_pred CCCCCccccccccccccccCCCCCCCC-CCCCCcceEEEEeccCccCCCCCCcccCCCCCeeEEEecceeccCC-chhhh
Q 008109 335 PPLNDTNFVTNFVNKLRSLGSAQFPAN-VPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEASINNISFVMP-TTALL 412 (577)
Q Consensus 335 p~~~~~~~~~~~~~~l~~l~~~~~~~~-~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~s~~~p-~~~~l 412 (577)
+. .+.... . ...+.++.....+.. .....+..+.+.... ..+..+.|+|||++|..+ ..|+|
T Consensus 326 ~~-~~~~~~-~-~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~iNg~s~~~~~~~P~L 389 (559)
T 2q9o_A 326 PP-VDHQCL-D-TLDVRPVVPRSVPVNSFVKRPDNTLPVALDL-------------TGTPLFVWKVNGSDINVDWGKPII 389 (559)
T ss_dssp CC-CCCTTC-C-CSCCCBSSCCBCCCTTCCCCGGGEEEEEEEC-------------SSSSSCEEEETTBCCCCCTTSCHH
T ss_pred cC-CCcccc-c-ccccccCCCCCCCCcccccceeEEEEEEeec-------------CCCceEEEEECCEecccCCCCCcH
Confidence 10 010000 0 012222211111110 111123344333221 022346799999999765 45666
Q ss_pred hhhhcCCCCCcccCCCCCCCCccccCCCCCCCCccccCCceEEEecC-CCEEEEEEeeCCC-CCCCCCceeecCCceEEE
Q 008109 413 QAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVVLPF-NTSVELIMQDTSI-LGAENHPLHLHGYNFFVV 490 (577)
Q Consensus 413 ~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~v~~~l~N~~~-~~~~~HP~HlHG~~F~Vl 490 (577)
...+.+. .+|+ .+..++.++. +++++|+++|... ...+.||||||||+||||
T Consensus 390 ~~~~~g~------~~~~--------------------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl 443 (559)
T 2q9o_A 390 DYILTGN------TSYP--------------------VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVL 443 (559)
T ss_dssp HHHHHTC------CCCC--------------------GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEE
T ss_pred hHhhcCC------ccCC--------------------CCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEE
Confidence 5544321 1221 1345666764 5778888888531 014799999999999999
Q ss_pred Eecc---------CcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEecCceeEEEeeechhhhhcccEEEEEEecCC
Q 008109 491 GQGF---------GNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVLDGK 561 (577)
Q Consensus 491 ~~g~---------g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 561 (577)
+++. |.|++..+...+++.+|+|||||.|++++|++|||++||||.|||||||++|++.|||++|.|.++.
T Consensus 444 ~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~~ 523 (559)
T 2q9o_A 444 GRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPAD 523 (559)
T ss_dssp EESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHH
T ss_pred ecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcch
Confidence 9987 6666532234678889999999999999999999999999999999999999999999999886543
Q ss_pred CCCCcCCCC--CC-CCCCC
Q 008109 562 LPNQKLLPP--PA-DLPKC 577 (577)
Q Consensus 562 ~~~~~~~~~--p~-~~~~c 577 (577)
..++.+. |. .+++|
T Consensus 524 --~~~~~~~~~p~~~~~~C 540 (559)
T 2q9o_A 524 --LRQRISQEDEDDFNRVC 540 (559)
T ss_dssp --HGGGCCHHHHHHHHHHH
T ss_pred --hhhccccCCchhhhhhc
Confidence 3444433 33 44555
No 8
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=1.1e-91 Score=758.29 Aligned_cols=468 Identities=30% Similarity=0.525 Sum_probs=360.3
Q ss_pred EEEEEEEEEEEeccCceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCC-----CceeeeEcceeccCCCCCCCCCCcc
Q 008109 30 RHYKFNVELKNVTRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQ-----HNISIHWHGIRQLRSGWADGPAYIT 104 (577)
Q Consensus 30 ~~~~l~~~~~~~~~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~-----~~~~iH~HG~~~~~~~~~DGv~~~t 104 (577)
.+|+|+|++..++++|+.+.+|+|||++ ||+||+++||+|+|+|+|+|+ ++++|||||+++.+.+|+||+|++|
T Consensus 5 ~~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vt 83 (503)
T 1hfu_A 5 SVDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVN 83 (503)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccc
Confidence 4699999999999999999999999999 999999999999999999999 9999999999999889999999999
Q ss_pred ccccCCCCeEEEEEEECCCceeeEEeccccccc-ccceEeEEEeCCCCC-CCCCCCCCCeeeEEeeccccccHHHHHHHh
Q 008109 105 QCPIQTGQSYIYNFTIVGQRGTLWWHAHISWLR-STLYGPIIILPKRGI-PYPFAKPYKEVPIVFGEWFKSDTEAIINQA 182 (577)
Q Consensus 105 q~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 182 (577)
||+|+||++|+|+|++++++||||||||.+.|+ +||+|+|||+++.+. ..++...++|++|+++||+++...++.
T Consensus 84 q~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~--- 160 (503)
T 1hfu_A 84 QCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQ--- 160 (503)
T ss_dssp BCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC---
T ss_pred cCCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhc---
Confidence 999999999999999778999999999999888 899999999987642 222333347999999999998765421
Q ss_pred hhCCCCCCCCCeEEEcCcCCCCCCCCC-CceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEeCCcccCceEEe
Q 008109 183 LQTGGGPNVSDAYTFNGLPGPLYNCSA-KDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETE 261 (577)
Q Consensus 183 ~~~~~~~~~~~~~liNG~~~~~~~~~~-~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d 261 (577)
+ ...++.++|||+.. +.|+. ...+.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+++|+.++
T Consensus 161 ---~--~~~~d~~liNG~~~--~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~ 233 (503)
T 1hfu_A 161 ---G--AAQPDATLINGKGR--YVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVD 233 (503)
T ss_dssp --------CCSEEEETTBCC--BTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEES
T ss_pred ---C--CCCCCEEEECcccc--cCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccC
Confidence 1 13569999999974 55643 3458999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCceEEEEEEeCCCCCCceEEEEeeecccCCC---CCCCCceEEEEEEecCCCccccCCCCCCCCCcCCCCCCCC
Q 008109 262 TLVITPGQTTNVLLETKPHYPSATFFMTARPYVTGLG---TFDNSTVAGILEYEKPLNFIHSGNSIKKLPLFKPILPPLN 338 (577)
Q Consensus 262 ~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~ 338 (577)
++.|+|||||||+|++++++ |+|+|++.....+.. .+......++|+|++... . .+.. +..+...
T Consensus 234 ~l~l~pgeR~dvlv~~~~~~--g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~--------~-~p~~-~~~~~~~ 301 (503)
T 1hfu_A 234 RLQIFTGQRYSFVLDANQPV--DNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAAN--------A-DPTT-SANPNPA 301 (503)
T ss_dssp BEEECTTCEEEEEEECCSCS--SEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCS--------S-CCCC-CCCSSCC
T ss_pred eEEEcccceEEEEEEcCCCc--cceeeeeccccCCcccccccCCCceEEEEEECCCCC--------C-CCCC-CCCCccC
Confidence 99999999999999999865 899999986532211 122223479999987542 1 0111 1111110
Q ss_pred CccccccccccccccCCCCCCC-CCCCCCcceEEEEeccCccCCCCCCcccCCCCCeeEEEecceeccCCchhhhhhhhc
Q 008109 339 DTNFVTNFVNKLRSLGSAQFPA-NVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEASINNISFVMPTTALLQAHFT 417 (577)
Q Consensus 339 ~~~~~~~~~~~l~~l~~~~~~~-~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~s~~~p~~~~l~~~~~ 417 (577)
... ..+|+++.....+. ..+...+.++.+.++. ++. .|+|||++|..+..|.|.+...
T Consensus 302 ~l~-----~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~--------------~~~--~~~iNg~~~~~~~~P~l~~~~~ 360 (503)
T 1hfu_A 302 QLN-----EADLHALIDPAAPGIPTPGAADVNLRFQLGF--------------SGG--RFTINGTAYESPSVPTLLQIMS 360 (503)
T ss_dssp BCC-----GGGCBBSSSCSCSSCSSTTCSSEEEECCEEE--------------ETT--EEEETTBCCCCCSSCHHHHHHT
T ss_pred CCc-----cccccccCccCCCCcccCCcceEEEEEEeec--------------cCc--eEEECCCccCCCCCcchhhhhc
Confidence 000 12344443222221 1122333333322211 122 5899999999887776655442
Q ss_pred CCCCCccc-CCCCCCCCccccCCCCCCCCccccCCceEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCc
Q 008109 418 GQSNGVYV-PDFPTSPLIPFNYTGNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGN 496 (577)
Q Consensus 418 ~~~~g~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~ 496 (577)
+ .+. .+ ...++.++.++.|++|||+++|.. ..+.||||||||+||||+++.+.
T Consensus 361 g----~~~~~~--------------------~~~~~~~~~v~~g~~vei~l~~n~--~~~~HP~HLHGh~F~Vl~~~~~~ 414 (503)
T 1hfu_A 361 G----AQSAND--------------------LLPAGSVYELPRNQVVELVVPAGV--LGGPHPFHLHGHAFSVVRSAGSS 414 (503)
T ss_dssp T----CCSGGG--------------------SSSTTSEEEECSSCEEEEEEECCS--TTCCCEEEETTCCEEEEECTTCC
T ss_pred C----Cccccc--------------------CCCCceEEEccCCCEEEEEEECCC--CCCCCCEEEecceEEEEecCCCC
Confidence 2 111 01 123467889999999999999543 25799999999999999997542
Q ss_pred CCCCCCCCCCCCCCCCeeeeEEe-CCCcEEEEEEEecCceeEEEeeechhhhhcccEEEEEEecCCCCCCcCCCCC-CCC
Q 008109 497 FDPNKDPAKFNLVDPIERNTVGV-PSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVLDGKLPNQKLLPPP-ADL 574 (577)
Q Consensus 497 ~~~~~~~~~~~~~~p~~rDTv~v-p~~~~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~~p-~~~ 574 (577)
.+++.+|.|||||.| ++++|++|||++||||.|+|||||++|++.|||++|.|.+.. ..++.++| .+.
T Consensus 415 --------~~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~--~~~~~~~p~~~~ 484 (503)
T 1hfu_A 415 --------TYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMAN--TVDANNPPVEWA 484 (503)
T ss_dssp --------CCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHH--HHHHCCCCHHHH
T ss_pred --------ccccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchh--hhhccCCChHHh
Confidence 357789999999999 999999999999999999999999999999999999986543 33455444 445
Q ss_pred CCC
Q 008109 575 PKC 577 (577)
Q Consensus 575 ~~c 577 (577)
+.|
T Consensus 485 ~~C 487 (503)
T 1hfu_A 485 QLC 487 (503)
T ss_dssp HHH
T ss_pred hhc
Confidence 666
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=2.1e-83 Score=683.25 Aligned_cols=403 Identities=23% Similarity=0.340 Sum_probs=318.7
Q ss_pred eeeEEEEEEEEEEEeccCceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCcccc
Q 008109 27 AITRHYKFNVELKNVTRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQC 106 (577)
Q Consensus 27 ~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~ 106 (577)
+.+++|+|++++..++++|.++.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++++ ++||++ +
T Consensus 14 ~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~----~ 87 (439)
T 2xu9_A 14 GGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPISP--KVDDPF----L 87 (439)
T ss_dssp TTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCCT--TTSCTT----C
T ss_pred CCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCCc--cccCCc----c
Confidence 4578999999999999999999999999999999999999999999999999999999999999876 699986 5
Q ss_pred ccCCCCeEEEEEEEC-CCceeeEEeccccc----cc-ccceEeEEEeCCCCCCCCCCCCCCeeeEEeeccccccHHHH--
Q 008109 107 PIQTGQSYIYNFTIV-GQRGTLWWHAHISW----LR-STLYGPIIILPKRGIPYPFAKPYKEVPIVFGEWFKSDTEAI-- 178 (577)
Q Consensus 107 ~i~PG~~~~Y~~~~~-~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~-- 178 (577)
.|+||++|+|+|+++ +++||||||||.++ |. +||+|+|||+++.+. .+...+++|++|+++||+++.....
T Consensus 88 ~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~-~~~~~~~~e~~l~l~D~~~~~~~~~~~ 166 (439)
T 2xu9_A 88 EIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDA-IPELREAEEHLLVLKDLALQGGRPAPH 166 (439)
T ss_dssp CBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGG-SHHHHTSEEEEEEEEEECEETTEECCC
T ss_pred cCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCcccc-CccCCCCCcEEEEEEeeeeCCCCcCCC
Confidence 699999999999985 58999999999864 44 899999999987642 1111357899999999988753100
Q ss_pred HHHhhhCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEeCCccc-Cc
Q 008109 179 INQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYV-KP 257 (577)
Q Consensus 179 ~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v-~P 257 (577)
.......+ ..++.++|||+.+ |.++|++| +|||||||+|+.+.+.|+|+||+|+||+.||+++ +|
T Consensus 167 ~~~~~~~g---~~~~~~~iNG~~~----------p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~~p 232 (439)
T 2xu9_A 167 TPMDWMNG---KEGDLVLVNGALR----------PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEP 232 (439)
T ss_dssp CHHHHHHC---CCCSEEEETTEES----------CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEE
T ss_pred CccccccC---CCCCEEEECCccC----------CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCCCc
Confidence 00000111 2458999999964 67999999 9999999999999999999999999999999997 89
Q ss_pred eEEeEEEECCCceEEEEEEeCCCCCCceEEEEeeecccCCC--------------CCCCCceEEEEEEecCCCccccCCC
Q 008109 258 FETETLVITPGQTTNVLLETKPHYPSATFFMTARPYVTGLG--------------TFDNSTVAGILEYEKPLNFIHSGNS 323 (577)
Q Consensus 258 ~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~~~~~~--------------~~~~~~~~ail~y~~~~~~~~~~~~ 323 (577)
+.++++.|+|||||||+|+++++ |+|+|++.....+.. ........++++|.+...
T Consensus 233 ~~~~~l~l~pgeR~dv~v~~~~~---G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------- 302 (439)
T 2xu9_A 233 LEVSELLLAPGERAEVLVRLRKE---GRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPK------- 302 (439)
T ss_dssp EEESCEEECTTCEEEEEEECCSS---EEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCC-------
T ss_pred eEeceEEECCceeEEEEEEcCCC---ceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCc-------
Confidence 99999999999999999999985 899999975433210 011235678889875431
Q ss_pred CCCCCCcCCCCCCCCCccccccccccccccCCCCCCCCCCCCCcceEEEEeccCccCCCCCCcccCCCCCeeEEEeccee
Q 008109 324 IKKLPLFKPILPPLNDTNFVTNFVNKLRSLGSAQFPANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEASINNIS 403 (577)
Q Consensus 324 ~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~s 403 (577)
+. + +|... ..+..+ + .+ ..++++.++++. .+ ..|+|||++
T Consensus 303 ---~~---~-~p~~l---------~~~~~l-----~--~~-~~~r~~~l~~~~--------------~g--~~~~iNg~~ 342 (439)
T 2xu9_A 303 ---PL---P-LPKAL---------SPFPTL-----P--AP-VVTRRLVLTEDM--------------MA--ARFFINGQV 342 (439)
T ss_dssp ---CC---C-CCSCC---------CCCCCC-----C--CC-SEEEEEEEEEEG--------------GG--TEEEETTBC
T ss_pred ---cc---c-CcccC---------CCcccC-----C--CC-CcceEEEEEeec--------------cC--ceEeECCEE
Confidence 00 0 11100 001111 1 11 123555555432 01 258899988
Q ss_pred ccCCchhhhhhhhcCCCCCcccCCCCCCCCccccCCCCCCCCccccCCceEEEecCCCEEEEEEeeCCCCCCCCCceeec
Q 008109 404 FVMPTTALLQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLH 483 (577)
Q Consensus 404 ~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlH 483 (577)
|..+. ..+.++.|++++|+|+|.+ .+.||||||
T Consensus 343 ~~~~~--------------------------------------------~~~~~~~g~~~~~~~~N~~---~~~HP~HLH 375 (439)
T 2xu9_A 343 FDHRR--------------------------------------------VDLKGQAQTVEVWEVENQG---DMDHPFHLH 375 (439)
T ss_dssp CCTTC--------------------------------------------CCEEECTTCEEEEEEEECS---SSCEEEEES
T ss_pred CCCCC--------------------------------------------CceecCCCCEEEEEEEcCC---CCCCCceeC
Confidence 74321 0146788999999999975 489999999
Q ss_pred CCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEecCceeEEEeeechhhhhcccEEEEEEe
Q 008109 484 GYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 484 G~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 558 (577)
||+||||+++.+.+ .+|.|||||.|++++|++|||++||||.|+|||||++|+|.|||++|+|.
T Consensus 376 G~~F~Vl~~~g~~~-----------~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 376 VHPFQVLSVGGRPF-----------PYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp SCCBEEEEETTEEC-----------SSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred CCcEEEEeeCCCCC-----------CCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 99999999975432 36899999999999999999999999999999999999999999999883
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=2.2e-83 Score=683.69 Aligned_cols=406 Identities=17% Similarity=0.183 Sum_probs=316.4
Q ss_pred eeEEEEEEEEEEEecc-CceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCcccc
Q 008109 28 ITRHYKFNVELKNVTR-LCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQC 106 (577)
Q Consensus 28 ~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~ 106 (577)
.+++|+|++++..+++ +|..+.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++++. +||+| ||
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~---~~ 91 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP---AR 91 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG---GG
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC---cC
Confidence 3578999999999998 799999999999999999999999999999999999999999999999987 99998 89
Q ss_pred ccCCCCeEEEEEEECCCceeeEEeccccc----cc-ccceEeEEEeCCCCCCCCCCC--CCCeeeEEeeccccccHHHHH
Q 008109 107 PIQTGQSYIYNFTIVGQRGTLWWHAHISW----LR-STLYGPIIILPKRGIPYPFAK--PYKEVPIVFGEWFKSDTEAII 179 (577)
Q Consensus 107 ~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~ 179 (577)
+|+||++|+|+|++.+++||||||||.++ |. +||+|+|||+++.+...+++. .++|++|+++||+++...++.
T Consensus 92 ~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~ 171 (451)
T 2uxt_A 92 MMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPE 171 (451)
T ss_dssp CBCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEE
T ss_pred cCCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCcee
Confidence 99999999999998556999999999954 44 899999999998654333332 478999999999887544321
Q ss_pred HHhhhCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEE-cCceeEEEEeCCccc-Cc
Q 008109 180 NQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSI-ANHTLTVVEVDAVYV-KP 257 (577)
Q Consensus 180 ~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~v-~P 257 (577)
+...+.....++.++|||+.+ |.++|++| +|||||||+|+.+.+.|+| +||+|+||++||+++ +|
T Consensus 172 --~~~~~~~~~~~d~~liNG~~~----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P 238 (451)
T 2uxt_A 172 --YNEPGSGGFVGDTLLVNGVQS----------PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAP 238 (451)
T ss_dssp --CCCCSSSCCCCSEEEETTEES----------CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEE
T ss_pred --cccccCCCCcCCEEEECCccc----------ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCc
Confidence 111222345679999999975 57999999 9999999999999999999 899999999999998 89
Q ss_pred eEEeEEEECCCceEEEEEEeCCCCCCceEEEEeeecccCCC-------CCCCCceEEEEEEecCCCccccCCCCCCCCCc
Q 008109 258 FETETLVITPGQTTNVLLETKPHYPSATFFMTARPYVTGLG-------TFDNSTVAGILEYEKPLNFIHSGNSIKKLPLF 330 (577)
Q Consensus 258 ~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~~~~~~-------~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~ 330 (577)
+.++++.|+|||||||+|++++. +.|+|++.....+.+ ........++++|..... . . +. .
T Consensus 239 ~~~~~l~l~pgeR~dvlv~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~------~-~-~~-~ 306 (451)
T 2uxt_A 239 VSVKQLSLAPGERREILVDMSNG---DEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGL------L-P-LV-T 306 (451)
T ss_dssp EEESSEEECTTCEEEEEEECTTC---CCEEEEC----------------CCCCSCCEEEEEEECSC------C-C-----
T ss_pred eEeceEEECceeEEEEEEEeCCC---CEEEEEecCccccccccccccccCCCCCCcceEEEEecCC------C-c-Cc-c
Confidence 99999999999999999999974 899999876432211 011233467888876431 0 0 00 0
Q ss_pred CCCCCCCCCccccccccccccccCCCCCCCCCCCCCcceEEEEeccCccCCCCCCcccCCCCCeeEEEecceeccCCchh
Q 008109 331 KPILPPLNDTNFVTNFVNKLRSLGSAQFPANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEASINNISFVMPTTA 410 (577)
Q Consensus 331 ~p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~s~~~p~~~ 410 (577)
..+| ..|.++... + .+ .+.+..+.++ + .|+|||++|..+.
T Consensus 307 -~~~p------------~~L~~~~~~--~--~~--~~~~~~~~l~----------------~---~~~iNg~~f~~~~-- 346 (451)
T 2uxt_A 307 -DSLP------------MRLLPTEIM--A--GS--PIRSRDISLG----------------D---DPGINGQLWDVNR-- 346 (451)
T ss_dssp --CCC------------SCSSSSCCC--C--CC--CSEEEEEEEC----------------S---SSSBTTBCCCTTC--
T ss_pred -ccCc------------cccCCCCCC--C--CC--CcceEEEEEe----------------e---EEEECCEeCCCCC--
Confidence 1111 112222111 1 11 2222222221 1 3789988774220
Q ss_pred hhhhhhcCCCCCcccCCCCCCCCccccCCCCCCCCccccCCceEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEE
Q 008109 411 LLQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVV 490 (577)
Q Consensus 411 ~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl 490 (577)
..+.++.|++|+|+|+|. +.||||||||+||||
T Consensus 347 ------------------------------------------~~~~~~~G~~~~~~l~N~-----~~HP~HLHGh~F~Vl 379 (451)
T 2uxt_A 347 ------------------------------------------IDVTAQQGTWERWTVRAD-----EPQAFHIEGVMFQIR 379 (451)
T ss_dssp ------------------------------------------CCEEEETTCEEEEEEEEE-----EEEEEEETTCEEEEE
T ss_pred ------------------------------------------CcEEcCCCCEEEEEEECC-----CCcCeEECCceEEEE
Confidence 124678899999999995 589999999999999
Q ss_pred EeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEecCcee----EEEeeechhhhhcccEEEEEEecCC
Q 008109 491 GQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLADNPGV----WFMHCHLEVHTSWGLKTAWLVLDGK 561 (577)
Q Consensus 491 ~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~adnpG~----w~~HCHil~H~d~GM~~~~~V~~~~ 561 (577)
+++.. .+++.+|.|||||.| +++++|+|++||||. |||||||++|+|.|||++|.|.+..
T Consensus 380 ~~~G~---------~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~ 443 (451)
T 2uxt_A 380 NVNGA---------MPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP 443 (451)
T ss_dssp EETTB---------CCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSC
T ss_pred eeCCc---------CCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCc
Confidence 99622 245667999999999 999999999999988 9999999999999999999998654
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=4.2e-81 Score=677.12 Aligned_cols=421 Identities=19% Similarity=0.275 Sum_probs=317.6
Q ss_pred eEEEEEEEEEEE--eccCceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCcccc
Q 008109 29 TRHYKFNVELKN--VTRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQC 106 (577)
Q Consensus 29 ~~~~~l~~~~~~--~~~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~ 106 (577)
+++|+|++++.. +.++|..+.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||++++.. +||++ ||
T Consensus 36 ~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~~--~DG~~---~~ 110 (534)
T 3abg_A 36 IWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRAA--FDGWA---ED 110 (534)
T ss_dssp CEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCTT--TTTCS---SS
T ss_pred eEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCCC--CCCCC---CC
Confidence 478999999654 567888899999999999999999999999999999999999999999998864 99985 79
Q ss_pred ccCCCCeEEEEEEECCCceeeEEeccccccc-----ccceEeEEEeCCCCCCCCCCC--CCCeeeEEeeccccccHHHHH
Q 008109 107 PIQTGQSYIYNFTIVGQRGTLWWHAHISWLR-----STLYGPIIILPKRGIPYPFAK--PYKEVPIVFGEWFKSDTEAII 179 (577)
Q Consensus 107 ~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-----~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~ 179 (577)
+|.||++|+|+|++.+++||||||||.++++ +||+|+|||+++.+...+++. .+.|++|+++||+.+...++.
T Consensus 111 ~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~ 190 (534)
T 3abg_A 111 ITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLV 190 (534)
T ss_dssp CBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBC
T ss_pred CCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCcee
Confidence 9999999999999866689999999998753 799999999998875555543 367899999999876543221
Q ss_pred HHhhhCC-CCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcC-------ceeEEEEeC
Q 008109 180 NQALQTG-GGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIAN-------HTLTVVEVD 251 (577)
Q Consensus 180 ~~~~~~~-~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~g-------h~~~via~D 251 (577)
. ..+ .....++.++|||+.+ +.++|++ ++|||||||+|+.+.+.|+|++ |+|+||++|
T Consensus 191 ~---~~~~~~~~~gd~~lvNG~~~----------p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~D 256 (534)
T 3abg_A 191 T---TNGELNSFWGDVIHVNGQPW----------PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASD 256 (534)
T ss_dssp C---CTTCSSCCCCSEEEETTEES----------CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEET
T ss_pred c---cCCCCccccCceeccCCccC----------ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEeC
Confidence 1 111 1234579999999976 4578888 5999999999999999999987 999999999
Q ss_pred Ccc-cCceEEeEEEECCCceEEEEEEeCCCCCCceEEEEeeeccc-CCC-CCCCCceEEEEEEecCCCccccCCCCCCCC
Q 008109 252 AVY-VKPFETETLVITPGQTTNVLLETKPHYPSATFFMTARPYVT-GLG-TFDNSTVAGILEYEKPLNFIHSGNSIKKLP 328 (577)
Q Consensus 252 G~~-v~P~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~~~-~~~-~~~~~~~~ail~y~~~~~~~~~~~~~~~~~ 328 (577)
|++ .+|+.+++|.|+|||||||+|++++.+ |.+|+|++..... +.+ ........++++|..... ....
T Consensus 257 G~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~-g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~--------~~~~ 327 (534)
T 3abg_A 257 SGLLEHPADTSLLYISMAERYEVVFDFSDYA-GKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADD--------TTQP 327 (534)
T ss_dssp TEEEEEEEEESCEEECTTCEEEEEEECSSCT-TSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCC--------SSCS
T ss_pred CCcccCceEeceEEECCccEEEEEEEcCCCC-CceEEEEeccccccccccccCcCCcceeEEEecCCC--------CcCC
Confidence 986 499999999999999999999999854 3479999854211 111 111123458899975431 0000
Q ss_pred CcCCCCCCCCCccccccccccccccCCCCCCCCCCCCCcceEEEEeccCccCCCCCCcccCCCCCeeEEEecceeccCCc
Q 008109 329 LFKPILPPLNDTNFVTNFVNKLRSLGSAQFPANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEASINNISFVMPT 408 (577)
Q Consensus 329 ~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~s~~~p~ 408 (577)
.. ...| ..|+.+.. +. .+...++++. +.. .+ ..|+|||++|..+.
T Consensus 328 ~~-~~~P------------~~L~~~~~---p~-~~~~~~~~~~--~~~--------------~~--~~w~iNG~~f~~~~ 372 (534)
T 3abg_A 328 DT-SVVP------------ANLRDVPF---PS-PTTNTPRQFR--FGR--------------TG--PTWTINGVAFADVQ 372 (534)
T ss_dssp CC-CCCC------------CCCCCCSC---CC-CCCCCCEEEE--CSC--------------CC--STTCCCCBTTBCTT
T ss_pred CC-CCCc------------cccccCCC---CC-CccccceEEE--Eec--------------cC--ceeEECCcccCCCC
Confidence 00 0011 11222211 10 1122333332 211 01 24889998884331
Q ss_pred hhhhhhhhcCCCCCcccCCCCCCCCccccCCCCCCCCccccCCceEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceE
Q 008109 409 TALLQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFF 488 (577)
Q Consensus 409 ~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~ 488 (577)
.+ ....++.|++++|+|+|.+ +.+.||||||||+||
T Consensus 373 ~p------------------------------------------~l~~v~~G~~~~w~i~N~~--~~~~HP~HLHG~~F~ 408 (534)
T 3abg_A 373 NR------------------------------------------LLANVPVGTVERWELINAG--NGWTHPIHIHLVDFK 408 (534)
T ss_dssp SC------------------------------------------CCCEECTTCEEEEEEEECS--SSCCCCEEESSCCEE
T ss_pred Cc------------------------------------------ceeeccCCCEEEEEEEcCC--CCCCcCEEECCeeEE
Confidence 10 0125678999999999964 236999999999999
Q ss_pred EEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEE-ecCceeEEEeeechhhhhcccEEEEEEecCC
Q 008109 489 VVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFL-ADNPGVWFMHCHLEVHTSWGLKTAWLVLDGK 561 (577)
Q Consensus 489 Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~-adnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 561 (577)
||+++.|.+.. ...++.+ .|||||.|+|+++++|||+ +||||.|+|||||++|++.|||+.|.|....
T Consensus 409 Vl~~~~g~~~~----~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 409 VISRTSGNNAR----TVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp EEEESSCCSSS----CCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred EEEEcCCCCcC----cCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 99996554321 1234455 8999999999999999999 7999999999999999999999999998654
No 12
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=6.4e-80 Score=667.92 Aligned_cols=429 Identities=17% Similarity=0.213 Sum_probs=315.8
Q ss_pred eEEEEEEEEEEEecc--CceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCCC----------------------ceee
Q 008109 29 TRHYKFNVELKNVTR--LCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQH----------------------NISI 84 (577)
Q Consensus 29 ~~~~~l~~~~~~~~~--~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~----------------------~~~i 84 (577)
..+|+|++++...++ ++..+.+|+|||++|||+||+++||+|+|+|+|+|++ +|+|
T Consensus 25 ~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsi 104 (513)
T 2wsd_A 25 KTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVV 104 (513)
T ss_dssp CEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCE
T ss_pred ceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEE
Confidence 455999999988765 4568999999999999999999999999999999975 9999
Q ss_pred eEcceeccCCCCCCCCCC--ccccccCCCCeE---EEEEEECCCceeeEEecccccc----c-ccceEeEEEeCCCCCCC
Q 008109 85 HWHGIRQLRSGWADGPAY--ITQCPIQTGQSY---IYNFTIVGQRGTLWWHAHISWL----R-STLYGPIIILPKRGIPY 154 (577)
Q Consensus 85 H~HG~~~~~~~~~DGv~~--~tq~~i~PG~~~---~Y~~~~~~~~Gt~wYH~H~~~~----~-~Gl~G~liV~~~~~~~~ 154 (577)
||||+++++. +||+|+ ++||+|+||++| +|+|++.+++||||||||.++. . +||+|+|||+++.+...
T Consensus 105 HwHGl~~~~~--~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~ 182 (513)
T 2wsd_A 105 HLHGGVTPDD--SDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRL 182 (513)
T ss_dssp EEETCCCCGG--GSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGGG
T ss_pred EcCCCcCCCc--cCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccccc
Confidence 9999999854 999996 799999999555 9999976689999999999763 3 79999999999876555
Q ss_pred CCCCCCCeeeEEeeccccccHHHHHHHhh----------hCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEE
Q 008109 155 PFAKPYKEVPIVFGEWFKSDTEAIINQAL----------QTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYL 224 (577)
Q Consensus 155 ~~~~~~~e~~l~~~d~~~~~~~~~~~~~~----------~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~r 224 (577)
+++.+++|++|+++||+++...++..... ........++.++|||+.+ +.+++++| +||
T Consensus 183 ~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~----------p~~~v~~~-~~R 251 (513)
T 2wsd_A 183 KLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW----------PYLEVEPR-KYR 251 (513)
T ss_dssp CCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES----------CEEECCSS-EEE
T ss_pred cCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc----------ceEEecCC-EEE
Confidence 55567899999999998765433211100 0011234579999999976 56889885 899
Q ss_pred EEEEecCCCCcEEEEEcCc-eeEEEEeCCccc-CceEEeEEEECCCceEEEEEEeCCCCCCce-EEEEeeecccCCCCCC
Q 008109 225 LRLVNSALNDDLFFSIANH-TLTVVEVDAVYV-KPFETETLVITPGQTTNVLLETKPHYPSAT-FFMTARPYVTGLGTFD 301 (577)
Q Consensus 225 lRliN~~~~~~~~~~i~gh-~~~via~DG~~v-~P~~~d~l~l~pgeR~dv~v~~~~~~~~g~-y~l~~~~~~~~~~~~~ 301 (577)
|||||+|+.+.+.|+|++| +|+||++||+++ +|+.++++.|+|||||||+|++++.+ |+ +.+.+... +...+.
T Consensus 252 lRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~--g~~~~l~~~~~--~~~~~~ 327 (513)
T 2wsd_A 252 FRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYE--GESIILANSAG--CGGDVN 327 (513)
T ss_dssp EEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGT--TCEEEEEECCC--SSSSCC
T ss_pred EEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCC--CcEEEEEeccc--ccccCC
Confidence 9999999999999999999 999999999998 89999999999999999999999864 55 44444322 111112
Q ss_pred CCceEEEEEEecCCCccccCCCCCCCCCcCCCCCCCCCccccccccccccccCCCCCCCCCCCCCcceEEEEeccCccCC
Q 008109 302 NSTVAGILEYEKPLNFIHSGNSIKKLPLFKPILPPLNDTNFVTNFVNKLRSLGSAQFPANVPQNVDKRFFFTVGLGTSPC 381 (577)
Q Consensus 302 ~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~d~~~~~~~~~~~~~~ 381 (577)
.....++++|..... . . .+.. ...|.. +..+.. .+. .+...++++.++..+..
T Consensus 328 ~~~~~~il~~~~~~~------~-~-~~~~-~~~p~~------------l~~~~~--~~~-~~~~~~~~~~l~~~~~~--- 380 (513)
T 2wsd_A 328 PETDANIMQFRVTKP------L-A-QKDE-SRKPKY------------LASYPS--VQH-ERIQNIRTLKLAGTQDE--- 380 (513)
T ss_dssp TTTTTEEEEEECCSC------C-S-SCCC-CCCCSB------------CSCCGG--GCC-CCEEEEEEEEEEEEECT---
T ss_pred CCCCcceEEEEeccC------c-c-cCcc-CCCCcc------------ccCCCC--ccc-CCCcceEEEEEEeecCC---
Confidence 223457889976431 0 0 0000 111110 111000 000 01123444444433211
Q ss_pred CCCCcccCCCCCeeEEEecceeccCCchhhhhhhhcCCCCCcccCCCCCCCCccccCCCCCCCCccccCCceEEEecCCC
Q 008109 382 PRNQTCQGPNGTMFEASINNISFVMPTTALLQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVVLPFNT 461 (577)
Q Consensus 382 ~~~~~~~~~~~~~~~~~in~~s~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 461 (577)
. +...|.|||++|..+. .+.++.|+
T Consensus 381 ---------~-g~~~~~iNg~~~~~~~---------------------------------------------~~~~~~g~ 405 (513)
T 2wsd_A 381 ---------Y-GRPVLLLNNKRWHDPV---------------------------------------------TETPKVGT 405 (513)
T ss_dssp ---------T-SCEEEEETTBCTTSCC---------------------------------------------CBCCBTTC
T ss_pred ---------C-CCceEeECCccCCCcc---------------------------------------------cEecCCCC
Confidence 1 2345789998874220 11346799
Q ss_pred EEEEEEeeCCCCCCCCCceeecCCceEEEEeccC---cCCCCC------CCCCCCCCCCCeeeeEEeCCCcEEEEEEEe-
Q 008109 462 SVELIMQDTSILGAENHPLHLHGYNFFVVGQGFG---NFDPNK------DPAKFNLVDPIERNTVGVPSGGWVAIRFLA- 531 (577)
Q Consensus 462 ~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g---~~~~~~------~~~~~~~~~p~~rDTv~vp~~~~v~irf~a- 531 (577)
+|+|+|+|.+ .+.||||||||+||||+++.+ .|++.. .+......++.|||||.|++++++.|+|++
T Consensus 406 ~~~w~l~N~~---~~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~ 482 (513)
T 2wsd_A 406 TEIWSIINPT---RGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFG 482 (513)
T ss_dssp EEEEEEEECS---SSCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECC
T ss_pred EEEEEEEcCC---CCCcCEeEeCceEEEEEecCcccccccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEec
Confidence 9999999965 479999999999999998742 222110 000112224569999999999999999999
Q ss_pred cCceeEEEeeechhhhhcccEEEEEEec
Q 008109 532 DNPGVWFMHCHLEVHTSWGLKTAWLVLD 559 (577)
Q Consensus 532 dnpG~w~~HCHil~H~d~GM~~~~~V~~ 559 (577)
||||.|+|||||++|+|.|||+.|+|.+
T Consensus 483 dnpG~w~~HCHil~H~~~GMm~~~~V~~ 510 (513)
T 2wsd_A 483 PYSGRYVWHCHALEHEDYDMMRPMDITD 510 (513)
T ss_dssp SCCEEEEEEESCHHHHTTTCEEEEEEBC
T ss_pred CCCCCEEEEcCChhhhhcCCceeEEEeC
Confidence 8999999999999999999999999975
No 13
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.6e-79 Score=653.70 Aligned_cols=420 Identities=21% Similarity=0.291 Sum_probs=308.7
Q ss_pred eeeeeEEEEEEEEEEEecc-CceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCc
Q 008109 25 VLAITRHYKFNVELKNVTR-LCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYI 103 (577)
Q Consensus 25 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 103 (577)
..+.+++|+|++++..+++ +|+.+.+|+|||++|||+||+++||+|+|+|+|+|+++|+|||||+++++ ++||+|
T Consensus 46 ~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~p-- 121 (481)
T 3zx1_A 46 KEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPP--DQDGSP-- 121 (481)
T ss_dssp CSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCCG--GGSCCT--
T ss_pred cCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccCC--ccCCCc--
Confidence 4568899999999999997 68999999999999999999999999999999999999999999999864 599997
Q ss_pred cccccCCCCeEEEEEEECCC-ceeeEEeccccc----cc-ccceEeEEEeCCCCCCCCCCCCCCeeeEEeeccccccHHH
Q 008109 104 TQCPIQTGQSYIYNFTIVGQ-RGTLWWHAHISW----LR-STLYGPIIILPKRGIPYPFAKPYKEVPIVFGEWFKSDTEA 177 (577)
Q Consensus 104 tq~~i~PG~~~~Y~~~~~~~-~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 177 (577)
||+|+||++|+|+|+++++ +||||||||.++ |. +||+|+|||+++++...++ +.++ |+++||+.+...+
T Consensus 122 -q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g~ 196 (481)
T 3zx1_A 122 -HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENAQ 196 (481)
T ss_dssp -TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTSC
T ss_pred -cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCCc
Confidence 8999999999999998543 899999999854 44 8999999999987654433 3454 9999998865432
Q ss_pred HHHHhhhCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEeCCccc-C
Q 008109 178 IINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYV-K 256 (577)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v-~ 256 (577)
+.............++.++|||+.+ |.++|++|+ ||||||+|+.+.+.|+|+||+|+||++||+++ +
T Consensus 197 ~~~~~~~~~~~g~~gd~~lvNG~~~----------p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~~~~ 264 (481)
T 3zx1_A 197 IPNNNLNDWLNGREGEFVLINGQFK----------PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGLIEK 264 (481)
T ss_dssp CCCCCHHHHHHCCCCSEEEETTEES----------CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEEEEE
T ss_pred cccccchhhccCCcCCEEEECCccC----------ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCccCC
Confidence 2100000000123568999999965 589999998 99999999999999999999999999998876 8
Q ss_pred ceEEeEEEECCCceEEEEEEeCCCCCCceEEEEeeecccCCCCC-CCCceEEEEEEecCCCccccCCCCCCCCCcCCCCC
Q 008109 257 PFETETLVITPGQTTNVLLETKPHYPSATFFMTARPYVTGLGTF-DNSTVAGILEYEKPLNFIHSGNSIKKLPLFKPILP 335 (577)
Q Consensus 257 P~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~~~~~~~~-~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p 335 (577)
|+.++++.|+|||||||+|++++. +.|.|.+.......... .......+++...... +.. +|
T Consensus 265 P~~~~~l~l~pgeR~dvlv~~~~~---~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----------~~~----lP 327 (481)
T 3zx1_A 265 TIYKEELFLSPASRVEVLIDAPKD---GNFKLESAYYDRDKMMVKEEPNTLFLANINLKKE----------NVE----LP 327 (481)
T ss_dssp EEEESSEEECTTCEEEEEEECSSC---EEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECC----------CCC----CC
T ss_pred ceEeCeEEECCccEEEEEEEcCCC---cEEEEEEecccccCccccCCCCceeEEEEecCCC----------Ccc----CC
Confidence 999999999999999999999985 88999886533210000 1112333444432111 001 11
Q ss_pred CCCCccccccccccccccCCCCCCCCCCCCCcceEEEEeccCccCCCCCCcccCCCCC-----eeEEEecceeccCCchh
Q 008109 336 PLNDTNFVTNFVNKLRSLGSAQFPANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGT-----MFEASINNISFVMPTTA 410 (577)
Q Consensus 336 ~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~in~~s~~~p~~~ 410 (577)
. .+..+.. . ..+ ..++++.+........ .......+. ...|+|||+.|...
T Consensus 328 ~------------~l~~~~~--~--~~~-~~~r~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~iNG~~~~~~--- 383 (481)
T 3zx1_A 328 K------------NLKIFKP--S--EEP-KEFKEIIMSEDHMQMH----GMMGKSEGELKIALASMFLINRKSYDLK--- 383 (481)
T ss_dssp S------------CSCCCCC--C--CCC-CEEEEEEEEECCSTTT----TGGGCCHHHHHHHHHTTEEETTBCCCTT---
T ss_pred c------------cccCCCC--C--CCC-CcEEEEEEeccchhcc----cccccccccccccccceeEECCEeCCCC---
Confidence 1 1111110 0 111 1334444433211000 000000000 01378888766211
Q ss_pred hhhhhhcCCCCCcccCCCCCCCCccccCCCCCCCCccccCCceEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEE
Q 008109 411 LLQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVV 490 (577)
Q Consensus 411 ~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl 490 (577)
...+.++.|++|+|+|.|.+ .+.|||||||+.|+|+
T Consensus 384 -----------------------------------------~~~~~~~~G~~v~w~l~N~~---~~~Hp~HlHG~~F~vl 419 (481)
T 3zx1_A 384 -----------------------------------------RIDLSSKLGVVEDWIVINKS---HMDHPFHIHGTQFELI 419 (481)
T ss_dssp -----------------------------------------CCCEEEETTCCEEEEEEECS---SSCEEEEETTCCEEEE
T ss_pred -----------------------------------------CceEEeCCCCEEEEEEEcCC---CCceeEEEeccEEEEE
Confidence 12357789999999999964 5899999999999999
Q ss_pred Eec-cCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEecCceeEEEeeechhhhhcccEEEEEEe
Q 008109 491 GQG-FGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 491 ~~g-~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 558 (577)
++. .|. .....++.|||||.|+||++++|+|+|||||.|+|||||++|+|.|||+.|+|+
T Consensus 420 ~~~~~g~--------~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 420 SSKLNGK--------VQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp EEEETTE--------EEECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred EecccCC--------CCCcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 983 121 111235789999999999999999999999999999999999999999999996
No 14
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=1.4e-79 Score=653.43 Aligned_cols=396 Identities=20% Similarity=0.270 Sum_probs=300.5
Q ss_pred eEEEEEEEEEEEeccCceeeEEEEECCC-CCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccccc
Q 008109 29 TRHYKFNVELKNVTRLCHTKTLVSVNGQ-FPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCP 107 (577)
Q Consensus 29 ~~~~~l~~~~~~~~~~g~~~~~~~~ng~-~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~ 107 (577)
.++|+|++ |+|||+ +|||+||+++||+|+|+|+|+|+++++|||||+++++ ++||+|+ |+
T Consensus 20 ~~~~~l~~--------------~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~~---~~ 80 (448)
T 3aw5_A 20 ATYIEATA--------------SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNW--HNDAHPS---FA 80 (448)
T ss_dssp CSEEEEET--------------TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCH--HHHTCGG---GC
T ss_pred CcEEEEEE--------------EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCCC--ccCCCCC---cc
Confidence 55677777 999999 9999999999999999999999999999999999874 4999997 99
Q ss_pred cCCCCeEEEEEEECCCceeeEEecccc----ccc-ccceEeEEEeCCCCCCCCCCCCCCeeeEEeeccccccHHHHHHH-
Q 008109 108 IQTGQSYIYNFTIVGQRGTLWWHAHIS----WLR-STLYGPIIILPKRGIPYPFAKPYKEVPIVFGEWFKSDTEAIINQ- 181 (577)
Q Consensus 108 i~PG~~~~Y~~~~~~~~Gt~wYH~H~~----~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~- 181 (577)
|.||++|+|+|++++++||||||||.+ .|. +||+|+|||+++++. .+++...+|++|+++||+++. .++...
T Consensus 81 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~~d~~e~~l~l~D~~~~~-~~~~~~~ 158 (448)
T 3aw5_A 81 ITPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFKYGVNDLPLVISDRRFIG-GAPVYNP 158 (448)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEECTTTT-TTCCBTTTEEEEEEEEEEEET-TEEECCC
T ss_pred CCCCCEEEEEEEcCCCCCceEeccCCCCchHHHHhccceEEEEEeCCccc-cCCCCCCceEEEEEEeeccCC-Ccccccc
Confidence 999999999999865899999999954 455 899999999998764 333322389999999998876 332110
Q ss_pred hhhCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEE--cC---ceeEEEEeCCcccC
Q 008109 182 ALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSI--AN---HTLTVVEVDAVYVK 256 (577)
Q Consensus 182 ~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i--~g---h~~~via~DG~~v~ 256 (577)
....+.....++.++|||+.+ +.++|++| +|||||||+|+.+.+.|+| +| |+|+||++||++++
T Consensus 159 ~~~~~~~~~~~~~~liNG~~~----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~ 227 (448)
T 3aw5_A 159 TPMEMIAGFLGNAVLVNGVKD----------AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLA 227 (448)
T ss_dssp CHHHHHHCCCCSEEEETTEET----------CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEE
T ss_pred cccccccCccccEEEECCccc----------ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccC
Confidence 000001123569999999975 67999999 9999999999999999999 99 99999999999997
Q ss_pred -ceEEeEEEECCCceEEEEEEeCCCCCCceEEEEeeecccCCC----------CCCCCceEEEEEEecCCCccccCCCCC
Q 008109 257 -PFETETLVITPGQTTNVLLETKPHYPSATFFMTARPYVTGLG----------TFDNSTVAGILEYEKPLNFIHSGNSIK 325 (577)
Q Consensus 257 -P~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~~~~~~----------~~~~~~~~ail~y~~~~~~~~~~~~~~ 325 (577)
|+.++++.|+|||||||+|++++ +.|+|++.....+.+ ........++++|.+... .
T Consensus 228 ~P~~~~~l~l~pgeR~dvlv~~~~----~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-- 295 (448)
T 3aw5_A 228 RPIEVRALFLAPAERAEVVVELGE----GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGE------A-- 295 (448)
T ss_dssp EEEEESCEEECTTCEEEEEEEECS----EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECC------C--
T ss_pred CceEeceEEECCcceEEEEEECCC----CceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCC------C--
Confidence 99999999999999999999983 789999986543211 112235678888875431 0
Q ss_pred CCCCcCCCCCCCCCccccccccccccccCCCCCCCCCCCCCcceEEEEeccCccCCCCCCcccCCCCCeeEEEecceecc
Q 008109 326 KLPLFKPILPPLNDTNFVTNFVNKLRSLGSAQFPANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEASINNISFV 405 (577)
Q Consensus 326 ~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~s~~ 405 (577)
+. |. .|..+... ..+...++++.++.+ ...|+|||++|.
T Consensus 296 ------~~-p~------------~L~~lp~~----~~~~~~~~~~~l~~~------------------~~~~~iNg~~~~ 334 (448)
T 3aw5_A 296 ------VP-VE------------ALSDPPPE----PPKPTRTRRFALSLS------------------GMQWTINGMFWN 334 (448)
T ss_dssp ------CC-CC------------CCSCCCCC----CCCCSEEEEEEEEEE------------------TTEEEETTBCCC
T ss_pred ------CC-cc------------ccCCCCCC----CCCCCceEEEEEeCC------------------CceeeECCCcCC
Confidence 00 00 01111100 112233455544332 124899998884
Q ss_pred CCchhhhhhhhcCCCCCcccCCCCCCCCccccCCCCCCCCccccCCceEEE-ecCCCEEEEEEeeCCCCCCCCCceeecC
Q 008109 406 MPTTALLQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVV-LPFNTSVELIMQDTSILGAENHPLHLHG 484 (577)
Q Consensus 406 ~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~v~~~l~N~~~~~~~~HP~HlHG 484 (577)
.+. | .+. ++.|++|+|+|+|.+ ..+.|||||||
T Consensus 335 ~~~------------------------p--------------------~~~~~~~g~~v~~~i~N~~--~~~~HP~HLHG 368 (448)
T 3aw5_A 335 ASN------------------------P--------------------LFEHVSVEGVELWEIVNDK--ASMPHPMHLHG 368 (448)
T ss_dssp TTC------------------------T--------------------TCCCEEECEEEEEEEEECS--SSCCEEEEESS
T ss_pred CCC------------------------C--------------------ceeccCCCCeEEEEEEcCC--CCCCcCEEECC
Confidence 321 0 113 567999999999975 14799999999
Q ss_pred CceEEEEeccCcCCCCCCCCCC----CCCCCCeeeeEEeCCCcEEEEE--EE---ecCceeEEEeeechhhhhcccEEEE
Q 008109 485 YNFFVVGQGFGNFDPNKDPAKF----NLVDPIERNTVGVPSGGWVAIR--FL---ADNPGVWFMHCHLEVHTSWGLKTAW 555 (577)
Q Consensus 485 ~~F~Vl~~g~g~~~~~~~~~~~----~~~~p~~rDTv~vp~~~~v~ir--f~---adnpG~w~~HCHil~H~d~GM~~~~ 555 (577)
|+||||+++ |.+........+ +..++.|||||.|+++++++|+ |+ +||| |+|||||++|+|.|||++|
T Consensus 369 ~~F~Vl~~~-G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~ 445 (448)
T 3aw5_A 369 FPMWIIERK-DSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINI 445 (448)
T ss_dssp SCBEEEEEE-SCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEE
T ss_pred ceEEEEEec-CCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEE
Confidence 999999985 443211111112 2334579999999999999766 88 8999 9999999999999999999
Q ss_pred EEe
Q 008109 556 LVL 558 (577)
Q Consensus 556 ~V~ 558 (577)
.|.
T Consensus 446 ~V~ 448 (448)
T 3aw5_A 446 AVK 448 (448)
T ss_dssp EEC
T ss_pred EeC
Confidence 883
No 15
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=2.3e-78 Score=674.40 Aligned_cols=462 Identities=17% Similarity=0.219 Sum_probs=305.0
Q ss_pred eeeEEEEEEEEEEEecc--CceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCc-----------------------
Q 008109 27 AITRHYKFNVELKNVTR--LCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHN----------------------- 81 (577)
Q Consensus 27 ~~~~~~~l~~~~~~~~~--~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~----------------------- 81 (577)
...+.|+|++++...+. ++..+.+|+|||++|||+|+|++||+|+|+|+|+|+++
T Consensus 30 ~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~ 109 (612)
T 3gyr_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCcccccc
Confidence 34578999999887765 45678999999999999999999999999999999654
Q ss_pred ------------------eeeeEcceeccCCCCCCCCCCccccccCCCCeEEEEEEECCCceeeEEeccccc----cc-c
Q 008109 82 ------------------ISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHISW----LR-S 138 (577)
Q Consensus 82 ------------------~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~ 138 (577)
|+|||||+++++ ++||++ ||+|.||++|+|+|++.+++||||||||.++ |+ +
T Consensus 110 ~~~~~~~~~~~~~~~~~~ttiHwHGl~~~~--~~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~ 184 (612)
T 3gyr_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGG--GNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCT--TTSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTT
T ss_pred ccccccccccccccCCCCceEEcCCCccCC--cccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhc
Confidence 678888888764 488876 9999999999999998677899999999865 44 8
Q ss_pred cceEeEEEeCCCCCCCCCCCCCCeeeEEeeccccccHHHHHHHhh--------h--------CCCCCCCCCeEEEcCcCC
Q 008109 139 TLYGPIIILPKRGIPYPFAKPYKEVPIVFGEWFKSDTEAIINQAL--------Q--------TGGGPNVSDAYTFNGLPG 202 (577)
Q Consensus 139 Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~--------~--------~~~~~~~~~~~liNG~~~ 202 (577)
||+|+|||+++.+...+++.+++|++|+|+||+++.......... . ....+..++.++|||+.+
T Consensus 185 Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~ 264 (612)
T 3gyr_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW 264 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES
T ss_pred cceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCcc
Confidence 999999999988766666778999999999998754332210000 0 001234568999999975
Q ss_pred CCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcCc-------eeEEEEeCCccc-CceEE------eEEEECCC
Q 008109 203 PLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANH-------TLTVVEVDAVYV-KPFET------ETLVITPG 268 (577)
Q Consensus 203 ~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh-------~~~via~DG~~v-~P~~~------d~l~l~pg 268 (577)
+.+.++. ++|||||||+|+.+.+.|+|++| +|+|||+||+++ +|+.+ ++|.|+||
T Consensus 265 ----------p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pG 333 (612)
T 3gyr_A 265 ----------PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPA 333 (612)
T ss_dssp ----------CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTT
T ss_pred ----------ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccc
Confidence 5677876 58999999999999999999998 499999999998 56655 48999999
Q ss_pred ceEEEEEEeCCCCCCce-EEEEeeecccCCC---CCCCCceEEEEEEecCCCccccCCCCCCCCCcCCCCCCCCCccccc
Q 008109 269 QTTNVLLETKPHYPSAT-FFMTARPYVTGLG---TFDNSTVAGILEYEKPLNFIHSGNSIKKLPLFKPILPPLNDTNFVT 344 (577)
Q Consensus 269 eR~dv~v~~~~~~~~g~-y~l~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~ 344 (577)
|||||+|++++.. |. |++.......... .........+++|..... .......+ |...........
T Consensus 334 eRydVlV~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-p~~~~~~~~~~~- 403 (612)
T 3gyr_A 334 ERFDLLVDFRALG--GRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRET------CEEDSFAL-PEVLSGSFRRMS- 403 (612)
T ss_dssp CEEEEEEECTTCT--TCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECC------SCCCCCCC-CSSCCSSCCCCC-
T ss_pred eEEEEEEECCCCC--ceEEEEEecCCcCCcCccCccccccccceeeecccCC------CCCCcccc-cccccccccccc-
Confidence 9999999999875 44 4444432211111 111233455666654331 00111111 110000000000
Q ss_pred cccccccccCCCCCCCCCCCCCcceEEEEeccCccCCCCCCcccCCCCCeeEEEeccee----ccCCchhhhhhhhcCCC
Q 008109 345 NFVNKLRSLGSAQFPANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEASINNIS----FVMPTTALLQAHFTGQS 420 (577)
Q Consensus 345 ~~~~~l~~l~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~s----~~~p~~~~l~~~~~~~~ 420 (577)
...+ ...+.......... ........+.+.... +..+....+..
T Consensus 404 ---------------~~~~--~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 451 (612)
T 3gyr_A 404 ---------------HDIP--HGHRLIVLTPPGTK---------GSGGHPEIWEMAEVEDPADVQVPAEGVIQV------ 451 (612)
T ss_dssp ---------------TTSC--CEEEEEEEECTTCT---------TTTTCCEEEEEEECC-----CCSCTTEEEE------
T ss_pred ---------------cccc--cccccccccccccc---------cccccccccccccccccccccccccceeee------
Confidence 0000 00000000000000 000000111111100 00000000000
Q ss_pred CCcccCCCCCCCCccccCCCCCCCCccccCCceEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCC
Q 008109 421 NGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPN 500 (577)
Q Consensus 421 ~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~ 500 (577)
......+..+..++ ........+.++.|++|+|+|+|.+ .+.||||||||+||||+++.+.++..
T Consensus 452 ------~~~~~~~~~~~~n~------~~~~~~~~~~~~~g~~~~w~i~N~~---~~~HP~HLHG~~F~Vl~~~g~~~~~~ 516 (612)
T 3gyr_A 452 ------TGADGRTKTYRRTA------RTFNDGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGRDAYDASGF 516 (612)
T ss_dssp ------ECTTSCEEEEEEEE------CSTTSCCCEEEETTCEEEEEEEECS---SSCEEEEESSCEEEEEEEEEEECTTE
T ss_pred ------ccCCCccccccccC------ccCCCCcceEeCCCCEEEEEEEcCC---CCCcCEeECCCcEEEEeecCCcCccc
Confidence 00000000011110 0111234567889999999999975 48999999999999999865433321
Q ss_pred C---------------CCCCCCCCCCCeeeeEEeCCCcEEEEEEE-ecCceeEEEeeechhhhhcccEEEEEEecCC
Q 008109 501 K---------------DPAKFNLVDPIERNTVGVPSGGWVAIRFL-ADNPGVWFMHCHLEVHTSWGLKTAWLVLDGK 561 (577)
Q Consensus 501 ~---------------~~~~~~~~~p~~rDTv~vp~~~~v~irf~-adnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 561 (577)
. .....+..++.|||||.|++++|++|||+ +||||.|||||||++|||.|||+.|+|.++.
T Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~ 593 (612)
T 3gyr_A 517 DLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp ETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHH
T ss_pred cccccccccccccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCc
Confidence 0 01234567789999999999999999999 6999999999999999999999999998653
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=2.3e-77 Score=636.67 Aligned_cols=426 Identities=20% Similarity=0.258 Sum_probs=305.7
Q ss_pred eeEEEEEEEEEEEeccCceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccccc
Q 008109 28 ITRHYKFNVELKNVTRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCP 107 (577)
Q Consensus 28 ~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~ 107 (577)
..+.|+|++++..++++|+.+.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++++. +||+| ||+
T Consensus 16 ~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~p---~~~ 90 (488)
T 3od3_A 16 ARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGE--VDGGP---QGI 90 (488)
T ss_dssp TTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCHH--HHCCT---TCC
T ss_pred CCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccCcc--cCCCC---cCc
Confidence 4578999999999999999999999999999999999999999999999999999999999999864 99997 899
Q ss_pred cCCCCeEEEEEEECCCceeeEEeccccc----cc-ccceEeEEEeCCCCCCCCCCC--CCCeeeEEeeccccccHHHHHH
Q 008109 108 IQTGQSYIYNFTIVGQRGTLWWHAHISW----LR-STLYGPIIILPKRGIPYPFAK--PYKEVPIVFGEWFKSDTEAIIN 180 (577)
Q Consensus 108 i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~~ 180 (577)
|.||++|+|+|++.+++||||||||.++ |. +||+|+|||+++.+...+++. ...|++|+++||+++...++..
T Consensus 91 i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~ 170 (488)
T 3od3_A 91 IPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDY 170 (488)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCC
T ss_pred CcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceec
Confidence 9999999999998566899999999865 33 899999999998764433332 3469999999998865432110
Q ss_pred H-hhhCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEE-cCceeEEEEeCCccc-Cc
Q 008109 181 Q-ALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSI-ANHTLTVVEVDAVYV-KP 257 (577)
Q Consensus 181 ~-~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~v-~P 257 (577)
. ..........++.++|||+.+ |.+.+ +|++|||||||+|+.+.+.|+| +||+|+||++||+++ +|
T Consensus 171 ~~~~~~~~~g~~gd~~lvNG~~~----------p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~P 239 (488)
T 3od3_A 171 QLDVMTAAVGWFGDTLLTNGAIY----------PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEP 239 (488)
T ss_dssp CCSHHHHHHCCCCSEEEETTBSS----------CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEE
T ss_pred cccccccccCCCCCEEEEcCCcC----------ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccCc
Confidence 0 000000123568999999975 34555 5689999999999999999999 699999999999987 89
Q ss_pred eEEeEEEECCCceEEEEEEeCCCCCCceEEEEeeecccCC---CCCCCCceEEEEEEecCCCccccCCCCCCCCCcCCCC
Q 008109 258 FETETLVITPGQTTNVLLETKPHYPSATFFMTARPYVTGL---GTFDNSTVAGILEYEKPLNFIHSGNSIKKLPLFKPIL 334 (577)
Q Consensus 258 ~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~~~~~---~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~ 334 (577)
+.+++|.|+|||||||+|++++. +.|.|++....... ..++ ....+++...... ..... +
T Consensus 240 ~~~~~l~l~pGeR~dvlv~~~~~---~~~~l~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~--------~~~~~----~ 302 (488)
T 3od3_A 240 VKVSELPVLMGERFEVLVEVNDN---KPFDLVTLPVSQMGMAIAPFD--KPHPVMRIQPIAI--------SASGA----L 302 (488)
T ss_dssp EEESCEEECTTCEEEEEEEECTT---CCEEEEECCCSSTTTTSTTTT--SCEEEEEEEEEEE--------ECCCC----C
T ss_pred cEeceEEECCCCEEEEEEEeCCC---ceEEEEEeccCCCCccccccc--CccceeEeccccc--------CCCCC----C
Confidence 99999999999999999999975 88999876533210 0122 1223333322110 00001 1
Q ss_pred CCCCCccccccccccccccCCCCCCCCCCCCCcceEEEEeccC----------------ccCCC---------CCCccc-
Q 008109 335 PPLNDTNFVTNFVNKLRSLGSAQFPANVPQNVDKRFFFTVGLG----------------TSPCP---------RNQTCQ- 388 (577)
Q Consensus 335 p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~d~~~~~~~~~~----------------~~~~~---------~~~~~~- 388 (577)
|. .|..+.. .+ ......++++.+.+... ..... .+....
T Consensus 303 P~------------~L~~~~~--~~-~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 367 (488)
T 3od3_A 303 PD------------TLSSLPA--LP-SLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNH 367 (488)
T ss_dssp CS------------CCCCCCC--CC-CCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCC
T ss_pred Cc------------ccccCCC--Cc-ccccccceEEEEEecccccccccccccccccccccccccccccccccccCcccc
Confidence 11 0111100 00 01112345555543200 00000 000000
Q ss_pred CCCCCee----EEEecceeccCCchhhhhhhhcCCCCCcccCCCCCCCCccccCCCCCCCCccccCCceEEEecCCCEEE
Q 008109 389 GPNGTMF----EASINNISFVMPTTALLQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVVLPFNTSVE 464 (577)
Q Consensus 389 ~~~~~~~----~~~in~~s~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ 464 (577)
...+..+ .|.|||+.|... ...+.++.|++|+
T Consensus 368 ~~~g~~~~~~~~~~ING~~~~~~--------------------------------------------~~~~~~~~G~~e~ 403 (488)
T 3od3_A 368 MNHGGKFDFHHANKINGQAFDMN--------------------------------------------KPMFAAAKGQYER 403 (488)
T ss_dssp SCCCGGGCGGGCEEETTBCCCTT--------------------------------------------CCSEECCBSSCEE
T ss_pred ccccccccccceeeECCeeCCCC--------------------------------------------CCceEcCCCCEEE
Confidence 0001111 368888776321 1124678899999
Q ss_pred EEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEec----CceeEEEe
Q 008109 465 LIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLAD----NPGVWFMH 540 (577)
Q Consensus 465 ~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~ad----npG~w~~H 540 (577)
|+|.|.+ +.+.|||||||++|+|++++... ....++.|||||.|+ |+++.|+|++| +||.||||
T Consensus 404 w~l~N~~--~~~~Hp~HlHg~~F~Vl~~~g~~---------~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~H 471 (488)
T 3od3_A 404 WVISGVG--DMMLHPFHIHGTQFRILSENGKP---------PAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAH 471 (488)
T ss_dssp EEEECTT--CCCCEEEEETTCCBEEEEBTTBC---------CCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEE
T ss_pred EEEEeCC--CCCCccEEEcCceEEEeccCCCc---------cccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEe
Confidence 9999975 24789999999999999986321 112346799999999 99999999984 57899999
Q ss_pred eechhhhhcccEEEEEE
Q 008109 541 CHLEVHTSWGLKTAWLV 557 (577)
Q Consensus 541 CHil~H~d~GM~~~~~V 557 (577)
|||++|||.|||..|.|
T Consensus 472 CH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 472 CHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp ESSHHHHHTTCEEEEEC
T ss_pred CCchHHHhcCCcEEEEC
Confidence 99999999999999976
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=1.4e-75 Score=638.19 Aligned_cols=459 Identities=18% Similarity=0.239 Sum_probs=314.2
Q ss_pred eeEEEEEEEEEEEeccC--ceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCc------------------------
Q 008109 28 ITRHYKFNVELKNVTRL--CHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHN------------------------ 81 (577)
Q Consensus 28 ~~~~~~l~~~~~~~~~~--g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~------------------------ 81 (577)
..++|+|++++...++. +..+.+|+|||++|||+|++++||+|+|+++|+|++.
T Consensus 31 ~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~p 110 (612)
T 2g23_A 31 VTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEP 110 (612)
T ss_dssp TTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSC
T ss_pred CeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCccccccc
Confidence 36789999999987753 4689999999999999999999999999999999853
Q ss_pred -----------------eeeeEcceeccCCCCCCCCCCccccccCCCCeEEEEEEECCCceeeEEeccccc----cc-cc
Q 008109 82 -----------------ISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHISW----LR-ST 139 (577)
Q Consensus 82 -----------------~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~G 139 (577)
++|||||+++.+. +||++ ||+|.||++|+|+|++.+++||||||||.++ |. +|
T Consensus 111 ~~~g~~~~~~~~~~~~~tsiH~HG~~~~~~--~DG~p---~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~G 185 (612)
T 2g23_A 111 GRGGVEPNKDVAALPAWSVTHLHGAQTGGG--NDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAG 185 (612)
T ss_dssp SCTTCCCCHHHHTCCCCBCEEEETCCCCTT--TSCCG---GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTTT
T ss_pred ccccccccccccccCCceEEEcCCCCCCCc--cCCCC---cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhcc
Confidence 8999999999876 99986 8999999999999998568999999999986 44 89
Q ss_pred ceEeEEEeCCCCCCCCCCCCCCeeeEEeeccccccHHH-HHH-H------hhh----CCCC----CCCCCeEEEcCcCCC
Q 008109 140 LYGPIIILPKRGIPYPFAKPYKEVPIVFGEWFKSDTEA-IIN-Q------ALQ----TGGG----PNVSDAYTFNGLPGP 203 (577)
Q Consensus 140 l~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~-~~~-~------~~~----~~~~----~~~~~~~liNG~~~~ 203 (577)
|+|+|||+++.+...+++.+|+|++|+++||+++.... .+. . .+. .++. +..++.++|||+.+
T Consensus 186 L~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~~- 264 (612)
T 2g23_A 186 LYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW- 264 (612)
T ss_dssp CEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES-
T ss_pred ceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCccC-
Confidence 99999999987655556678999999999999864321 000 0 000 1111 24679999999975
Q ss_pred CCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcCc-------eeEEEEeCCccc-CceEEe------EEEECCCc
Q 008109 204 LYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANH-------TLTVVEVDAVYV-KPFETE------TLVITPGQ 269 (577)
Q Consensus 204 ~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh-------~~~via~DG~~v-~P~~~d------~l~l~pge 269 (577)
+.++|++| +|||||||+|+.+.+.|+|++| +|+||++||+++ +|+.++ +|.|+|||
T Consensus 265 ---------p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~pge 334 (612)
T 2g23_A 265 ---------PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAE 334 (612)
T ss_dssp ---------CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTC
T ss_pred ---------CeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECCcC
Confidence 57999999 9999999999999999999999 899999999999 699999 99999999
Q ss_pred eEEEEEEeCCCCCCceEEEEeeecccCCCCC---CCCceEEEEEEecCCCccccCCCCCCCCCcCCC-CCC-CCCccccc
Q 008109 270 TTNVLLETKPHYPSATFFMTARPYVTGLGTF---DNSTVAGILEYEKPLNFIHSGNSIKKLPLFKPI-LPP-LNDTNFVT 344 (577)
Q Consensus 270 R~dv~v~~~~~~~~g~y~l~~~~~~~~~~~~---~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~-~p~-~~~~~~~~ 344 (577)
||||+|++++.+ |.+|+|++.......+.. +......++++..... .......+ |. +.. ........
T Consensus 335 R~dvlVd~~~~~-g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~------~~~~~~~~-P~~L~~~~~~l~~~~ 406 (612)
T 2g23_A 335 RFDLLVDFRALG-GRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRET------CEEDSFAL-PEVLSGSFRRMSHDI 406 (612)
T ss_dssp EEEEEEECTTCT-TCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECC------SCCCCCCC-CSSCCSSCCCCCTTS
T ss_pred eEEEEEECCCCC-CCEEEEEeCCccCCCCccccccCccccceEEEEEccC------CCCCCCCC-ChhhccccccCCccc
Confidence 999999999864 567999876421111100 0011113444432221 00111111 11 100 00000000
Q ss_pred cccccccccCCCCCCCCCC-CCCcceEEEEeccCccC--CCCCC--cccCCCCCeeEEEecceeccCCchhhhhhhhcCC
Q 008109 345 NFVNKLRSLGSAQFPANVP-QNVDKRFFFTVGLGTSP--CPRNQ--TCQGPNGTMFEASINNISFVMPTTALLQAHFTGQ 419 (577)
Q Consensus 345 ~~~~~l~~l~~~~~~~~~p-~~~d~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~in~~s~~~p~~~~l~~~~~~~ 419 (577)
.....+..+..+ .... ....+.+.+........ .+... .....+|....|.|||..|.
T Consensus 407 ~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~-------------- 469 (612)
T 2g23_A 407 PHGHRLIVLTPP---GTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFN-------------- 469 (612)
T ss_dssp CCEEEEEEECCT---TCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTT--------------
T ss_pred ccceeEEeeccc---cccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCC--------------
Confidence 000000000000 0000 00000111100000000 00000 00001222234556655442
Q ss_pred CCCcccCCCCCCCCccccCCCCCCCCccccCCceEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCc---
Q 008109 420 SNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGN--- 496 (577)
Q Consensus 420 ~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~--- 496 (577)
....+.++.|++|+|+|.|.+ .+.||||||||.|+|++++.+.
T Consensus 470 -------------------------------~~~~~~v~~G~~v~w~l~N~~---~~~HPiHlHg~~F~Vl~r~~~~~~~ 515 (612)
T 2g23_A 470 -------------------------------DGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGRDAYDASG 515 (612)
T ss_dssp -------------------------------SCCCEEEETTCEEEEEEEECS---SSCEEEEESSCCEEEEEEEEEECTT
T ss_pred -------------------------------CCCceEecCCCEEEEEEEeCC---CCCCCeEEcCceEEEecccCccccc
Confidence 122357789999999999975 4899999999999999986432
Q ss_pred CCCCCCC------------CCCCCCCCCeeeeEEeCCCcEEEEEEEec-CceeEEEeeechhhhhcccEEEEEEecCC
Q 008109 497 FDPNKDP------------AKFNLVDPIERNTVGVPSGGWVAIRFLAD-NPGVWFMHCHLEVHTSWGLKTAWLVLDGK 561 (577)
Q Consensus 497 ~~~~~~~------------~~~~~~~p~~rDTv~vp~~~~v~irf~ad-npG~w~~HCHil~H~d~GM~~~~~V~~~~ 561 (577)
|+..... ...+..++.|||||.|+||++++|+|+|| |||.|||||||++|+|.|||+.|+|.+..
T Consensus 516 ~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f~V~p~~ 593 (612)
T 2g23_A 516 FDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp EETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCEEEEEEECHH
T ss_pred ccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCceEEEECchh
Confidence 2111100 22345567799999999999999999998 99999999999999999999999997643
No 18
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=2.8e-53 Score=493.37 Aligned_cols=270 Identities=17% Similarity=0.233 Sum_probs=208.8
Q ss_pred cceeeeeEEEEEEEEEEEeccC--c--------------------------eeeEEE-------EECCC--------CCC
Q 008109 23 ESVLAITRHYKFNVELKNVTRL--C--------------------------HTKTLV-------SVNGQ--------FPG 59 (577)
Q Consensus 23 ~~~~~~~~~~~l~~~~~~~~~~--g--------------------------~~~~~~-------~~ng~--------~pg 59 (577)
..+.|++|+|.|.|++..++.. + +.+.+. +||+. +||
T Consensus 15 ~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PG 94 (1065)
T 2j5w_A 15 TPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLG 94 (1065)
T ss_dssp -----CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSC
T ss_pred cccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcC
Confidence 5667899999999999876543 2 222333 57877 999
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeeeEcceecc----CCCCCCCCCC--ccccccCCCCeEEEEEEECCC---------c
Q 008109 60 PRIVAREGDRLLIKVVNHVQHNISIHWHGIRQL----RSGWADGPAY--ITQCPIQTGQSYIYNFTIVGQ---------R 124 (577)
Q Consensus 60 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~----~~~~~DGv~~--~tq~~i~PG~~~~Y~~~~~~~---------~ 124 (577)
|+||+++||+|+|+|+|+|+++++|||||++++ +.+|+||+++ ++||+|+||++|+|+|+++++ +
T Consensus 95 P~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~a 174 (1065)
T 2j5w_A 95 PIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNC 174 (1065)
T ss_dssp CCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSE
T ss_pred CeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCc
Confidence 999999999999999999999999999999987 4477888888 899999999999999998554 5
Q ss_pred eeeEEeccccccc---ccceEeEEEeCCCCCCCCCC-CCCCeeeEEee------ccccccHHHHHHH--hhhCCCC---C
Q 008109 125 GTLWWHAHISWLR---STLYGPIIILPKRGIPYPFA-KPYKEVPIVFG------EWFKSDTEAIINQ--ALQTGGG---P 189 (577)
Q Consensus 125 Gt~wYH~H~~~~~---~Gl~G~liV~~~~~~~~~~~-~~~~e~~l~~~------d~~~~~~~~~~~~--~~~~~~~---~ 189 (577)
||||||||.+.++ +||+|+|||++++....|.+ ..|+|++|+++ ||++.+....+.. ....... .
T Consensus 175 GT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~~~~~~~p~~~~~~~~~~~ 254 (1065)
T 2j5w_A 175 VTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYCSEPEKVDKDNEDFQ 254 (1065)
T ss_dssp EEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHHHHHCSCGGGCCTTCHHHH
T ss_pred eEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccchhhhhhcCcccccccccccc
Confidence 9999999999875 89999999999876443332 35889999999 5665433221100 0000000 0
Q ss_pred CCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCC-CcEEEEEcCceeEEEEeCCcccCceEEeEEEECCC
Q 008109 190 NVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALN-DDLFFSIANHTLTVVEVDAVYVKPFETETLVITPG 268 (577)
Q Consensus 190 ~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pg 268 (577)
..++.++|||+.+. ..+.+++++|++|||||+|+|.. ..+.|||+||+|+ ++|+.+|++.|+||
T Consensus 255 ~~~~~~~iNG~~~~-------~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~--------v~p~~~dtv~I~pG 319 (1065)
T 2j5w_A 255 QSNRMYSVNGYTFG-------SLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT--------NKNYRIDTINLFPA 319 (1065)
T ss_dssp HHTEEEEETTEETT-------CCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEE--------ETTEEESEEEECBT
T ss_pred ccCcEEEECCccCC-------CCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEE--------ECCeeecEEEECCC
Confidence 02357899999742 24679999999999999999976 5889999999999 35789999999999
Q ss_pred ceEEEEEEeCCCCCCceEEEEeeecccCCCCCCCCceEEEEEEecCC
Q 008109 269 QTTNVLLETKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPL 315 (577)
Q Consensus 269 eR~dv~v~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~ 315 (577)
|||||+|+++++ |.|+|+|+...... ....+.++|.+..
T Consensus 320 er~dVlv~~~~p---G~y~i~~h~~~h~~-----~Gm~~~~~V~~~~ 358 (1065)
T 2j5w_A 320 TLFDAYMVAQNP---GEWMLSCQNLNHLK-----AGLQAFFQVQECN 358 (1065)
T ss_dssp CEEEEEEECCSC---EEEEEEECSHHHHH-----TTCEEEEEEECSC
T ss_pred cEEEEEEEeCCC---eeEEEEecCcchhh-----CCCEEEEEEecCC
Confidence 999999999996 99999998753221 2457888887644
No 19
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=2e-53 Score=432.37 Aligned_cols=271 Identities=25% Similarity=0.411 Sum_probs=227.5
Q ss_pred eeEEEEEEEEEEEecc-CceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCcccc
Q 008109 28 ITRHYKFNVELKNVTR-LCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQC 106 (577)
Q Consensus 28 ~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~ 106 (577)
.+|+|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|.++.+++|||||+++....++||+|+++||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 4799999999999887 588899999999999999999999999999999999999999999999987789999999999
Q ss_pred ccCCCCeEEEEEEECCCceeeEEeccccccc----ccceEeEEEeCCCCCCCCCCCCCCeeeEEeeccccccHHHHHHHh
Q 008109 107 PIQTGQSYIYNFTIVGQRGTLWWHAHISWLR----STLYGPIIILPKRGIPYPFAKPYKEVPIVFGEWFKSDTEAIINQA 182 (577)
Q Consensus 107 ~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~----~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 182 (577)
+|+||++++|+|++ +++||||||||.+.+. +||+|+|||++++..+.+. ..|+|++|+++||+.+.....
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~~~---- 154 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWANKP---- 154 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTTCT----
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeecccccccc----
Confidence 99999999999998 7999999999997653 7999999999886532111 358999999999987532210
Q ss_pred hhCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEeCCccc-CceEEe
Q 008109 183 LQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYV-KPFETE 261 (577)
Q Consensus 183 ~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v-~P~~~d 261 (577)
...+.....++.++|||+.++. ...+++++|++|||||+|++.. .+.|||+||+|+||+.||.++ +|..+|
T Consensus 155 ~~~~~~~~~~d~~~ING~~~~~-------~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~d 226 (318)
T 3g5w_A 155 GEGGIPGDVFDYYTINAKSFPE-------TQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGD 226 (318)
T ss_dssp TCCCCTTCCCCEEEETTBCBTS-------SCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEEES
T ss_pred ccCCCCCCcCcEEEEcCcCCCC-------CccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCcccc
Confidence 1112222356899999998642 2458999999999999999965 678999999999999999998 799999
Q ss_pred EEEECCCceEEEEEEeCCCCCCceEEEEeeecccCCC-CCCCCceEEEEEEecCC
Q 008109 262 TLVITPGQTTNVLLETKPHYPSATFFMTARPYVTGLG-TFDNSTVAGILEYEKPL 315 (577)
Q Consensus 262 ~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~~~~~~-~~~~~~~~ail~y~~~~ 315 (577)
++.|.||||++|+++++++ |.|.++|+....... ........++|+|++..
T Consensus 227 tv~l~pger~~v~~~a~~p---G~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 227 TVLIGPGERYDVILNMDNP---GLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEEECTTCEEEEEEECCSC---SEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEEECCCCEEEEEEECCCC---eeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 9999999999999999997 999999996433221 01123557899998754
No 20
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=5.7e-52 Score=426.31 Aligned_cols=271 Identities=26% Similarity=0.482 Sum_probs=225.9
Q ss_pred eeEEEEEEEEEEEeccC-ceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCcccc
Q 008109 28 ITRHYKFNVELKNVTRL-CHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQC 106 (577)
Q Consensus 28 ~~~~~~l~~~~~~~~~~-g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~ 106 (577)
++++|+|++++..++++ |+++.+|+|||++|||+|+|++||+|+|+|+|.++.+++|||||+++...+|+||+|+++||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 47899999999999985 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEEEEEECCCceeeEEeccccc--c-c-ccceEeEEEeCCCCCCCCCCCCCCeeeEEeeccccccHHHHHHHh
Q 008109 107 PIQTGQSYIYNFTIVGQRGTLWWHAHISW--L-R-STLYGPIIILPKRGIPYPFAKPYKEVPIVFGEWFKSDTEAIINQA 182 (577)
Q Consensus 107 ~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~--~-~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 182 (577)
+|.||++|+|+|++ .++||||||||... + . +||+|++||+++.....+ ...|+|++++++||+...... .
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~-~~~d~e~~l~l~d~~~~~~~~----~ 155 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIE-KRVTKDVIMMMSTWESAVADK----Y 155 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTG-GGCSEEEEEEEEEECGGGTTC----T
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCccccc-ccCCceEEEEeeheecccccc----c
Confidence 99999999999998 79999999999876 3 3 799999999987653211 134789999999998632110 0
Q ss_pred hhCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEeCCcccC-ceEEe
Q 008109 183 LQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVK-PFETE 261 (577)
Q Consensus 183 ~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~-P~~~d 261 (577)
...+.....++.++|||+.++. ...+++++|++|||||+|+++. .+.|||+||+|+||+.||.+++ |..+|
T Consensus 156 ~~~g~~~~~~~~~~ING~~~~~-------~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~~~d 227 (339)
T 2zwn_A 156 GEGGTPMNVADYFSVNAKSFPL-------TQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPYYAD 227 (339)
T ss_dssp TCCCSTTSCCCEEEETTBCTTS-------SCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEEEES
T ss_pred CCCCCCccccceEEEccccCCC-------cccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCcEEE
Confidence 0011122246899999997642 2458999999999999999954 7889999999999999999984 88999
Q ss_pred EEEECCCceEEEEEEeCCCCCCceEEEEeeecccCCCC-CCCCceEEEEEEecCC
Q 008109 262 TLVITPGQTTNVLLETKPHYPSATFFMTARPYVTGLGT-FDNSTVAGILEYEKPL 315 (577)
Q Consensus 262 ~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~~~~~~~-~~~~~~~ail~y~~~~ 315 (577)
++.|.||||++|+|+++++ |.|+++|+........ .......++++|++..
T Consensus 228 tv~l~pg~r~~v~~~~~~p---G~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 228 TVLVSPGERYDVIIEADNP---GRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EEEECTTCEEEEEEECCSC---SEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEECCCCEEEEEEEeCCC---eeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 9999999999999999997 9999999865432111 1223457999997643
No 21
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=6e-53 Score=471.77 Aligned_cols=238 Identities=16% Similarity=0.204 Sum_probs=181.1
Q ss_pred EEEEEEEEeccC-ceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCC--------c
Q 008109 33 KFNVELKNVTRL-CHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAY--------I 103 (577)
Q Consensus 33 ~l~~~~~~~~~~-g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~--------~ 103 (577)
.|++++...+.. |..+..|+ ++|||+||+++||+|+|+|+|.|++++||||||++++.. +||+|+ +
T Consensus 50 ~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~--~DG~p~~Dg~~~~~v 124 (742)
T 2r7e_A 50 TLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKA--SEGAEYDDQTSQREK 124 (742)
T ss_dssp CCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSS--SSCCCSSCSCCSSSS
T ss_pred EEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCcc--ccCCccCCCCccccc
Confidence 445544444443 55554443 899999999999999999999999999999999998753 666654 8
Q ss_pred cccccCCCCeEEEEEEECC---------CceeeEEecccccc--c-ccceEeEEEeCCCCCCCCCCCCCCeeeEEeec--
Q 008109 104 TQCPIQTGQSYIYNFTIVG---------QRGTLWWHAHISWL--R-STLYGPIIILPKRGIPYPFAKPYKEVPIVFGE-- 169 (577)
Q Consensus 104 tq~~i~PG~~~~Y~~~~~~---------~~Gt~wYH~H~~~~--~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d-- 169 (577)
+||+|+||++|+|+|++++ ++||||||||.+.+ . +||+|+|||+++.....+.....+|++|++++
T Consensus 125 tq~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~d 204 (742)
T 2r7e_A 125 EDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFD 204 (742)
T ss_dssp SSSSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCC
T ss_pred ccCcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeeccc
Confidence 9999999999999999853 46999999999873 4 89999999999875432221224899888864
Q ss_pred ----cccccHHHHHHHhhhCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCC-cEEEEEcCce
Q 008109 170 ----WFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALND-DLFFSIANHT 244 (577)
Q Consensus 170 ----~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~-~~~~~i~gh~ 244 (577)
|+.......+.. +.........+.++|||+.. | ..+.+++++|++|||||+|+++.. .+.|||+||+
T Consensus 205 e~~~w~~~~~~~~~~~-~~~~~~~~~~~~~~ING~~~----~---~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~ 276 (742)
T 2r7e_A 205 EGKSWHSETKNSLMQD-RDAASARAWPKMHTVNGYVN----R---SLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHT 276 (742)
T ss_dssp CSSSSCCCCCC--------CCSCCCCCCCCEETTBCT----B---CCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCC
T ss_pred CCcccccccccccccc-CCCccccccCceEEECCccC----C---CCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCE
Confidence 444432211111 11111112346789999964 2 346799999999999999999765 6789999999
Q ss_pred eEEEEeCCcccCceEEeEEEECCCceEEEEEEeCCCCCCceEEEEeeecc
Q 008109 245 LTVVEVDAVYVKPFETETLVITPGQTTNVLLETKPHYPSATFFMTARPYV 294 (577)
Q Consensus 245 ~~via~DG~~v~P~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~~ 294 (577)
|+|++ ..+|++.|.|||+++|+++++++ |.|+++|+...
T Consensus 277 f~Vvg--------~~~Dtv~v~Pg~~~~v~~~~~~p---G~w~~hCH~~~ 315 (742)
T 2r7e_A 277 FLVRN--------HRQASLEISPITFLTAQTLLMDL---GQFLLFCHISS 315 (742)
T ss_dssp CEETT--------EECCSCCCCTTCCCEEEECCCSC---SEECCCCCSSS
T ss_pred EEEEe--------EecceEEeCCCcEEEEEEEeCCC---eeEEEEeCChh
Confidence 99984 24789999999999999999998 99999999643
No 22
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=3.1e-49 Score=422.78 Aligned_cols=401 Identities=15% Similarity=0.116 Sum_probs=260.4
Q ss_pred eeeeEEEEEEEEEEEeccCceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccc
Q 008109 26 LAITRHYKFNVELKNVTRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQ 105 (577)
Q Consensus 26 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq 105 (577)
.+.+++++++++......+ ..+++|||++ ||+|+|++||+|+|+|+|.+...+++||||... .+|
T Consensus 25 ~~~~~~~~~~~~~~~~~f~---g~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~-----------~~~ 89 (447)
T 2dv6_A 25 APVVFTLRTGIAEGRMVYI---GVGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA-----------RSA 89 (447)
T ss_dssp CCEEEEEEEEEETTEEEEE---EESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE-----------ECC
T ss_pred CCceEEEEEEecccEEEEe---ccceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc-----------ccc
Confidence 3466667666654444433 3566899999 999999999999999999998889999998642 257
Q ss_pred cccCCCCeEEEEEEECCCceeeEEeccccccc-ccceEeEEEeCCCCCCCCC-----CCCCCeeeEEeeccccccHHHH-
Q 008109 106 CPIQTGQSYIYNFTIVGQRGTLWWHAHISWLR-STLYGPIIILPKRGIPYPF-----AKPYKEVPIVFGEWFKSDTEAI- 178 (577)
Q Consensus 106 ~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~-----~~~~~e~~l~~~d~~~~~~~~~- 178 (577)
|+|.||++++|+|++ .++||||||||..+++ +||+|.|+|+++....... .....+++..+ |+.......+
T Consensus 90 ~~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~~ 167 (447)
T 2dv6_A 90 IVNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRID 167 (447)
T ss_dssp CBCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEEE
T ss_pred eecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEEE
Confidence 999999999999997 6799999999998877 7999999999876532210 00011111111 1100000000
Q ss_pred HH-HhhhCC-CCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCC-CCcEEEEEcCceeEEEEeCCccc
Q 008109 179 IN-QALQTG-GGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSAL-NDDLFFSIANHTLTVVEVDAVYV 255 (577)
Q Consensus 179 ~~-~~~~~~-~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~-~~~~~~~i~gh~~~via~DG~~v 255 (577)
+. ...... ......+.+++||+. +.|++++++|++||||++|.+. ...+.+++||. ++.||.+
T Consensus 168 l~~~~~~~~~~~g~~~~~~~~NG~~---------pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~DG~~- 233 (447)
T 2dv6_A 168 LETVEVKGQLDDNTTYTYWTFNGKV---------PGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPGGAA- 233 (447)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTBB---------SCCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGGGGG-
T ss_pred EEEEEEEEeccCCceeEEEEECCcc---------CCCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCCCCC-
Confidence 00 000000 011123678999984 3478999999999999999985 34566777774 3679973
Q ss_pred CceEEeEEEECCCceEEEEEEeCCCCCCceEEEEeeecccCCCCCCCCceEEEEEEecCCCccccCCCCCCCCCcCCCCC
Q 008109 256 KPFETETLVITPGQTTNVLLETKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSIKKLPLFKPILP 335 (577)
Q Consensus 256 ~P~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p 335 (577)
+++.|.||||+++.++++++ |+||++++...... . ......+.+.|.+... + |
T Consensus 234 -----~~~~i~pG~~~~~~~~~~~~---G~~~yh~h~~~~~~-~-~~~Gl~g~l~v~~~~~-------------~-P--- 286 (447)
T 2dv6_A 234 -----AFTQTDPGEETVVTFKALIP---GIYVYHCATPSVPT-H-ITNGMYGLLLVEPEGG-------------L-P--- 286 (447)
T ss_dssp -----GGCCBCTTCEEEEEEECCSC---EEEEEECCSSSHHH-H-HHTTCEEEEEEECTTC-------------S-C---
T ss_pred -----ccEEeCCCCEEEEEEECCCC---eEEEEEeCCCChHH-H-HhCCCEEEEEEeCCCC-------------C-C---
Confidence 23459999999999999886 99999998521100 0 0123467777764220 1 1
Q ss_pred CCCCccccccccccccccCCCCCCCCCCCCCcceEEEEeccCccCCCCCCcccCCCCCeeEEEecceeccCCchhhhhhh
Q 008109 336 PLNDTNFVTNFVNKLRSLGSAQFPANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEASINNISFVMPTTALLQAH 415 (577)
Q Consensus 336 ~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~s~~~p~~~~l~~~ 415 (577)
..... .. ..+....... . . ...... ....... .+ .....|.+||+.|...
T Consensus 287 ~~d~~-~~----~~~~~~~~~~---~-~-~~~g~~--~~~~~~~--------~~--~~~~~~~iNG~~~~~~-------- 336 (447)
T 2dv6_A 287 QVDRE-FY----VMQGEIYTVK---S-F-GTSGEQ--EMDYEKL--------IN--EKPEYFLFNGSVGSLT-------- 336 (447)
T ss_dssp CCSEE-EE----EEEEEECBSS---C-T-TCCEEC--CBBHHHH--------HT--TCCSEEEETTSTTCCC--------
T ss_pred CCCee-EE----EEecccccCC---c-c-cccccc--cCChHHh--------hc--cCCCEEEECCcccCCC--------
Confidence 11110 00 0011110000 0 0 000000 0000000 00 0112466777544100
Q ss_pred hcCCCCCcccCCCCCCCCccccCCCCCCCCccccCCceEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccC
Q 008109 416 FTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFG 495 (577)
Q Consensus 416 ~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g 495 (577)
....+.++.|++++|+|.|.+. ...||||||||+|+||+.+.+
T Consensus 337 -----------------------------------~~~~~~v~~g~~vrlrliN~~~--~~~h~~hlhGh~f~vv~~dG~ 379 (447)
T 2dv6_A 337 -----------------------------------RSHPLYASVGETVRIFFGVGGP--NFTSSFHVIGEIFDHVYSLGS 379 (447)
T ss_dssp -----------------------------------CCCCEEECTTCEEEEEEEEEES--SCCEEEEEETCCEEEECGGGC
T ss_pred -----------------------------------CCcceEECCCCEEEEEEEeCCC--CceEeEEEcCcEEEEEEcCCc
Confidence 0134688899999999999752 468999999999999998532
Q ss_pred cCCCCCCCCCCCCCCCC-eeeeEEeCCCcEEEEEEEecCceeEEEeeechhhhhcccEEEEEEecCCC
Q 008109 496 NFDPNKDPAKFNLVDPI-ERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVLDGKL 562 (577)
Q Consensus 496 ~~~~~~~~~~~~~~~p~-~rDTv~vp~~~~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 562 (577)
. +..|. +|||+.|++|+++.|+|++||||.|+||||+++|++.||+++|.|+....
T Consensus 380 ~-----------~~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 380 V-----------VSPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp S-----------SSCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCSC
T ss_pred c-----------cCCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCCC
Confidence 1 12344 79999999999999999999999999999999999999999999986654
No 23
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=3.5e-48 Score=396.19 Aligned_cols=261 Identities=21% Similarity=0.281 Sum_probs=219.4
Q ss_pred eeeeEEEEEEEEEEEecc-CceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCC--CceeeeEcceeccCCCCCCCCCC
Q 008109 26 LAITRHYKFNVELKNVTR-LCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQ--HNISIHWHGIRQLRSGWADGPAY 102 (577)
Q Consensus 26 ~~~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~--~~~~iH~HG~~~~~~~~~DGv~~ 102 (577)
.+.+++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+.. +||++.
T Consensus 35 ~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~-----~dG~~~ 109 (327)
T 1kbv_A 35 YPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGGAA 109 (327)
T ss_dssp SCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGTT
T ss_pred CCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCcccc-----CCCCCc
Confidence 367899999999999998 799999999999999999999999999999999996 599999999852 788875
Q ss_pred ccccccCCCCeEEEEEEECCCceeeEEeccccc---cc-ccceEeEEEeCCCCCCCCCCCCCCeeeEEeeccccccHHHH
Q 008109 103 ITQCPIQTGQSYIYNFTIVGQRGTLWWHAHISW---LR-STLYGPIIILPKRGIPYPFAKPYKEVPIVFGEWFKSDTEAI 178 (577)
Q Consensus 103 ~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~---~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~ 178 (577)
.+ .|.||++++|+|++ +++||||||||.++ +. +||+|+|||++++. ++.+|+|++++++||++.+....
T Consensus 110 ~~--~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~----~p~~d~e~~l~~~d~~~~~~~~~ 182 (327)
T 1kbv_A 110 AT--FTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG----LPKVDKEFYIVQGDFYTKGKKGA 182 (327)
T ss_dssp TT--CBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCTTC
T ss_pred ce--eecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC----CCCCceEEEEEeeeeeccCcccc
Confidence 44 49999999999997 78999999999853 33 89999999998753 23568999999999998652100
Q ss_pred -------HHHhhhCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEeC
Q 008109 179 -------INQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVD 251 (577)
Q Consensus 179 -------~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~D 251 (577)
..... + ..++.++|||+.+++.. .+.+++++|++|||||+|+++...+.|||+||+|+||+.|
T Consensus 183 ~g~~~~~~~~~~--~---~~~~~~~iNG~~~~~~~-----~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~D 252 (327)
T 1kbv_A 183 QGLQPFDMDKAV--A---EQPEYVVFNGHVGALTG-----DNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVE 252 (327)
T ss_dssp CEEECBCHHHHH--H---TCCSEEEETTSTTTTSG-----GGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGG
T ss_pred ccccccChhHhc--c---CCCceEEEcCcccCCCC-----ceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcC
Confidence 00000 1 24589999999876432 2579999999999999999988889999999999999999
Q ss_pred CcccCceEEeEEEECCCceEEEEEEeCCCCCCceEEEEeeecccCCCCCCCCceEEEEEEecCC
Q 008109 252 AVYVKPFETETLVITPGQTTNVLLETKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPL 315 (577)
Q Consensus 252 G~~v~P~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~ 315 (577)
|.+++|+.++++.|+||||+||+|+++++ |.|+|+++..... ......|+++|++..
T Consensus 253 G~~~~p~~~d~l~l~pGer~dv~v~~~~p---G~y~l~~h~~~~~----~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 253 GGKLINENVQSTIVPAGGSAIVEFKVDIP---GNYTLVDHSIFRA----FNKGALGQLKVEGAE 309 (327)
T ss_dssp GSSCEECSBSEEEECTTEEEEEEEEECSC---EEEEEEESSTHHH----HHSSCEEEEEEESCC
T ss_pred CCcCCCCceeEEEECCCCEEEEEEEeCCC---eEEEEEecccccc----ccCCcEEEEEECCCC
Confidence 99999999999999999999999999986 9999999865432 023568999998754
No 24
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=7.4e-48 Score=386.72 Aligned_cols=235 Identities=29% Similarity=0.371 Sum_probs=206.3
Q ss_pred eeeEEEEEEEEEEEeccC-ceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccc
Q 008109 27 AITRHYKFNVELKNVTRL-CHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQ 105 (577)
Q Consensus 27 ~~~~~~~l~~~~~~~~~~-g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq 105 (577)
..+++|+|++++..+++. |..+.+|+|||++|||+|++++||+|+|+|+|.++++++|||||++. .++||+|+++|
T Consensus 32 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~p~~~~ 108 (288)
T 3gdc_A 32 RTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGIGA 108 (288)
T ss_dssp CEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCCTTSTT
T ss_pred CcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCCCCccc
Confidence 457999999999988874 89999999999999999999999999999999999999999999972 45999999999
Q ss_pred cccCCCCeEEEEEEECCCceeeEEeccccc---cc-ccceEeEEEeCCCCCCCCCCCCCCeeeEEeeccccccHHHHHHH
Q 008109 106 CPIQTGQSYIYNFTIVGQRGTLWWHAHISW---LR-STLYGPIIILPKRGIPYPFAKPYKEVPIVFGEWFKSDTEAIINQ 181 (577)
Q Consensus 106 ~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~---~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 181 (577)
|+|+||++++|+|++ +++||||||||.+. +. +||+|+|||+++.... ..|+|++|+++||+.++
T Consensus 109 ~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~----~~d~e~~l~~~d~~~~~------- 176 (288)
T 3gdc_A 109 GSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP----PADDEMVMVMNGYNTDG------- 176 (288)
T ss_dssp CSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCC----CCSEEEEEEEEEECCSS-------
T ss_pred eeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCC----CCcceEEEEEeeEecCC-------
Confidence 999999999999998 89999999999974 33 8999999999987532 34799999999998762
Q ss_pred hhhCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCC-cEEEEEcCceeEEEEeCCccc-CceE
Q 008109 182 ALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALND-DLFFSIANHTLTVVEVDAVYV-KPFE 259 (577)
Q Consensus 182 ~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~v-~P~~ 259 (577)
+ ..++.++|||+.+++ ..+.+++++|++||||++|++... .+.|||+||.|+|++ +|..+ .|..
T Consensus 177 ----g---~~~~~~~iNG~~~~~------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~-~g~~~~~~~~ 242 (288)
T 3gdc_A 177 ----G---DDNEFYSVNGLPFHF------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYP-TGTMLTPSEY 242 (288)
T ss_dssp ----T---TCCSEEEETTSTTHH------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEE-TTCCSSCSEE
T ss_pred ----C---CCcceEEECcccccc------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEc-CCCccCCCce
Confidence 1 134789999997632 134689999999999999999654 689999999999997 55554 6789
Q ss_pred EeEEEECCCceEEEEEEeCCCCCCceEEEEeeec
Q 008109 260 TETLVITPGQTTNVLLETKPHYPSATFFMTARPY 293 (577)
Q Consensus 260 ~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~ 293 (577)
+|++.|.||||++|+++++++ |.|.++|+..
T Consensus 243 ~Dtv~v~pg~~~~v~~~~~~p---G~~~~hCH~~ 273 (288)
T 3gdc_A 243 TDTISQVQGQRGILELRFPYP---GKFMFHAHKT 273 (288)
T ss_dssp ESEEEEETTCEEEEEECCCSC---EEEEEECSSH
T ss_pred eeEEEeCCCceEEEEEECCCC---EEEEEEecCh
Confidence 999999999999999999988 9999999854
No 25
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=1.2e-45 Score=429.36 Aligned_cols=400 Identities=15% Similarity=0.138 Sum_probs=261.6
Q ss_pred eeeEEEEECCCCCC--CeEEEecCCEEEEEEEeCCCCceeeeEcceeccC-CCCCCCCCCccccccCCCCeEEEEEEECC
Q 008109 46 HTKTLVSVNGQFPG--PRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLR-SGWADGPAYITQCPIQTGQSYIYNFTIVG 122 (577)
Q Consensus 46 ~~~~~~~~ng~~pg--P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~-~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~ 122 (577)
..+.+.++||++|| |+|++++||+|+|+|.|. .+.+||||+++.+ +.++||++.+| |+|.||.+++|+|++ .
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-D 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-C
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-C
Confidence 56789999999999 889999999999999976 4569999999999 88999999999 999999999999997 7
Q ss_pred CceeeEEeccccccc-ccceEeEEEeCCCCCCCCCCCCCCeeeEEe----eccccccHHHHHHHhh-hCCCCCCCCCeEE
Q 008109 123 QRGTLWWHAHISWLR-STLYGPIIILPKRGIPYPFAKPYKEVPIVF----GEWFKSDTEAIINQAL-QTGGGPNVSDAYT 196 (577)
Q Consensus 123 ~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~----~d~~~~~~~~~~~~~~-~~~~~~~~~~~~l 196 (577)
++||||||||...++ +||+|.++|++......+...++.|.++++ .||++.....+..... ..+.. +..++
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~---p~~~~ 767 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQN---VSNAF 767 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCC---CCCTT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCccC---cccee
Confidence 999999999999987 999999999988654444446688999999 8999877665433221 11111 23333
Q ss_pred EcCcCCC----------------CCCC----------CCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEe
Q 008109 197 FNGLPGP----------------LYNC----------SAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEV 250 (577)
Q Consensus 197 iNG~~~~----------------~~~~----------~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~ 250 (577)
+|+.... .|.. -+.+.|+|++++|+++++|+.|... ..+.+|.+|.. +...
T Consensus 768 ~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~-~~~sih~HGl~--~~~~ 844 (1065)
T 2j5w_A 768 LDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMAT-RPYSIHAHGVQ--TESS 844 (1065)
T ss_dssp TCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSS-SCBCCEESSCB--CSCS
T ss_pred ecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCC-CCceEeecccc--ccCC
Confidence 3432110 0111 1224589999999999999999974 45557777743 3322
Q ss_pred CCcccCceEEeEEEECCCceEEEEEEeCCCC-------CCceEEEEeeecccCCCCCCCCceEEEEEEecCCCccccCCC
Q 008109 251 DAVYVKPFETETLVITPGQTTNVLLETKPHY-------PSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNS 323 (577)
Q Consensus 251 DG~~v~P~~~d~l~l~pgeR~dv~v~~~~~~-------~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~ 323 (577)
|. ..+.||+++...+...+.. ..|+||.+++..... .. .....+.|.+.....
T Consensus 845 -~~---------~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~--q~-~~GL~G~liV~~~~~------- 904 (1065)
T 2j5w_A 845 -TV---------TPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVK--DL-YSGLIGPLIVCRRPY------- 904 (1065)
T ss_dssp -CC---------CCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHH--HH-HTTCEEEEEEECCC--------
T ss_pred -CC---------ceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHH--hh-hccccceeEecCccc-------
Confidence 21 2567999988888776421 125899998742110 00 012234444442210
Q ss_pred CCCCCCcCCCCCCCCCccccccccccccccCCCCCCCCCCCCCcceEEEEec-cCccCCCCCCcccCCCCCeeEEEecce
Q 008109 324 IKKLPLFKPILPPLNDTNFVTNFVNKLRSLGSAQFPANVPQNVDKRFFFTVG-LGTSPCPRNQTCQGPNGTMFEASINNI 402 (577)
Q Consensus 324 ~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~in~~ 402 (577)
+.+..+ + .+..+.+.+. +.. +.. +....|+.
T Consensus 905 ------l~~~~~---------------------------~--~d~D~~l~~~~~d~------------~~~-~y~~~n~~ 936 (1065)
T 2j5w_A 905 ------LKVFNP---------------------------R--RKLEFALLFLVFDE------------NES-WYLDDNIK 936 (1065)
T ss_dssp ----------CC---------------------------C--CEEEEEEEEEEEEG------------GGS-TTHHHHHH
T ss_pred ------ccccCC---------------------------C--cceEEEEEEEeecC------------Ccc-eeeccCcc
Confidence 000000 0 0111111100 000 000 00001111
Q ss_pred eccC-C-chhhhhhhhcCCCCCcccCCCCCCCCccccCCCCCCCCccccCCceEEEecCCCEEEEEEeeCCCCCCCCCce
Q 008109 403 SFVM-P-TTALLQAHFTGQSNGVYVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAENHPL 480 (577)
Q Consensus 403 s~~~-p-~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~ 480 (577)
+|.. | .++++...+.. .+..+.++| .....+..+.++.|++|+|+|.|.+. ..+.|||
T Consensus 937 ~~~~~P~~v~~~~~~~~~-------------~~~~~~iNG------~~~~~~~~~~v~~G~~vr~~l~N~g~-~~~~Hpf 996 (1065)
T 2j5w_A 937 TYSDHPEKVNKDDEEFIE-------------SNKMHAING------RMFGNLQGLTMHVGDEVNWYLMGMGN-EIDLHTV 996 (1065)
T ss_dssp HHCSCGGGCCTTCHHHHH-------------HTEEEEETT------BCTTCCCCCEEETTCEEEEEEEECCS-TTCCEEE
T ss_pred cccCCccccCcchhhhhc-------------cCceEEECC------ccCCCCccEEeCCCCEEEEEEEeCCC-CCcceeE
Confidence 2210 0 01111000000 000000111 00012334678999999999999752 2478999
Q ss_pred eecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEecCceeEEEeeechhhhhcccEEEEEEecC
Q 008109 481 HLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVLDG 560 (577)
Q Consensus 481 HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~ 560 (577)
|||||.|+|++++ |.+||||.|+||++++|+|++||||.|+||||+++|++.|||++|.|.+.
T Consensus 997 HlHG~~F~vv~~~-----------------p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~ 1059 (1065)
T 2j5w_A 997 HFHGHSFQYKHRG-----------------VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQN 1059 (1065)
T ss_dssp EESSCCEEETTTT-----------------CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECC
T ss_pred EEcccEEEEEecC-----------------CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecC
Confidence 9999999998753 67999999999999999999999999999999999999999999999865
Q ss_pred C
Q 008109 561 K 561 (577)
Q Consensus 561 ~ 561 (577)
.
T Consensus 1060 ~ 1060 (1065)
T 2j5w_A 1060 E 1060 (1065)
T ss_dssp C
T ss_pred c
Confidence 4
No 26
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=1.1e-44 Score=386.81 Aligned_cols=263 Identities=22% Similarity=0.255 Sum_probs=219.2
Q ss_pred eeeeEEEEEEEEEEEecc-CceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCC--CceeeeEcceeccCCCCCCCCCC
Q 008109 26 LAITRHYKFNVELKNVTR-LCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQ--HNISIHWHGIRQLRSGWADGPAY 102 (577)
Q Consensus 26 ~~~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~--~~~~iH~HG~~~~~~~~~DGv~~ 102 (577)
.+.+++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+.+ +||++.
T Consensus 25 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~~~ 99 (442)
T 2zoo_A 25 HSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGGAE 99 (442)
T ss_dssp SCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGG
T ss_pred CCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCCCc
Confidence 468899999999999995 799999999999999999999999999999999985 599999999873 688775
Q ss_pred ccccccCCCCeEEEEEEECCCceeeEEeccccc---cc-ccceEeEEEeCCCCCCCCCCCCCCeeeEEeeccccccHHHH
Q 008109 103 ITQCPIQTGQSYIYNFTIVGQRGTLWWHAHISW---LR-STLYGPIIILPKRGIPYPFAKPYKEVPIVFGEWFKSDTEAI 178 (577)
Q Consensus 103 ~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~---~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~ 178 (577)
.+ +|.||++++|+|++ +++||||||||.++ +. +||+|+|||++++.. +.+|+|++|+++||++.+....
T Consensus 100 ~~--~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~----~~~d~e~~l~l~d~~~~~~~~~ 172 (442)
T 2zoo_A 100 SS--FTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGDFYTKGEFGE 172 (442)
T ss_dssp GC--CBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTTC
T ss_pred cE--EECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC----CCCCceEEEEeeeeeccCcccc
Confidence 43 69999999999997 88999999998643 33 899999999987542 2568999999999988653100
Q ss_pred -----HHHhhhCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEeCCc
Q 008109 179 -----INQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAV 253 (577)
Q Consensus 179 -----~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~ 253 (577)
+...... ...++.++|||+.++.. ..+.|++++|++|||||+|+|....+.|+|+||+|+||+.||.
T Consensus 173 ~~~~~~~~~~~~---~~~~~~~liNG~~~~~~-----~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~ 244 (442)
T 2zoo_A 173 AGLQPFDMAKAI---DEDADYVVFNGSVGSTT-----DENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGG 244 (442)
T ss_dssp CEEECBCHHHHH---TTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGS
T ss_pred cccccCChhHhc---cCCCCEEEECCCcCCCC-----CCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCc
Confidence 0000001 13568999999976421 1257999999999999999998888999999999999999999
Q ss_pred ccCceEEeEEEECCCceEEEEEEeCCCCCCceEEEEeeecccCCCCCCCCceEEEEEEecCC
Q 008109 254 YVKPFETETLVITPGQTTNVLLETKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPL 315 (577)
Q Consensus 254 ~v~P~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~ 315 (577)
+++|..++++.|.||||+||+|+++++ |.|+++++.+... ......++++|.+..
T Consensus 245 ~~~p~~~~~~~l~pg~r~~v~v~~~~~---G~y~~~~~~~~~~----~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 245 SLKNHNVQTTLIPAGGAAIVEFKVEVP---GTFILVDHSIFRA----FNKGALAMLKVEGPD 299 (442)
T ss_dssp SCEECSBSEEEECTTEEEEEEEECCSC---EEEEEEESSTHHH----HTTSCEEEEEEESCC
T ss_pred cCCCccceEEEECCCeeEEEEEEcCCC---CeEEEEecccccc----cccCceEEEEecCCC
Confidence 999999999999999999999999986 9999999865431 123568999998765
No 27
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=1.4e-44 Score=360.64 Aligned_cols=240 Identities=19% Similarity=0.264 Sum_probs=198.8
Q ss_pred ceeeeeEEEEEEEEEEEeccCceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCc
Q 008109 24 SVLAITRHYKFNVELKNVTRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYI 103 (577)
Q Consensus 24 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 103 (577)
.+.+.+|+|+|+|++.. .+.....+++|||++|||+||+++||+|+|+|+|+|+++++|||||++++.. +||++ +
T Consensus 2 ~~~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~~--~DG~~-~ 76 (276)
T 3kw8_A 2 PAGGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEIS--SDGTA-M 76 (276)
T ss_dssp --CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCCT-T
T ss_pred CCcceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCCc--cCCCc-C
Confidence 45788999999998753 3444456778999999999999999999999999999999999999999864 99999 9
Q ss_pred cccccCCCCeEEEEEEECC------------CceeeEEeccccc------cc-ccceEeEEEeCCCCCCCCCCCCCCeee
Q 008109 104 TQCPIQTGQSYIYNFTIVG------------QRGTLWWHAHISW------LR-STLYGPIIILPKRGIPYPFAKPYKEVP 164 (577)
Q Consensus 104 tq~~i~PG~~~~Y~~~~~~------------~~Gt~wYH~H~~~------~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~ 164 (577)
+||+|.||++|+|+|++.+ ++||||||||.++ +. +||+|+|||+++.... .|+|++
T Consensus 77 t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~~-----~drE~~ 151 (276)
T 3kw8_A 77 NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVL-----PDATHT 151 (276)
T ss_dssp TTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCC-----CSEEEE
T ss_pred CcCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCcc-----cccceE
Confidence 9999999999999999853 3799999999964 33 8999999999987532 389999
Q ss_pred EEeeccccccHHHHHHHhhhCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcCce
Q 008109 165 IVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHT 244 (577)
Q Consensus 165 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~ 244 (577)
|++++| +|||+.++ ..+.++++.|++|||||+|.+. ..+.||||||.
T Consensus 152 l~l~~~-------------------------~iNG~~~~-------~~p~i~v~~G~~vri~l~N~~~-~~Hp~HlHG~~ 198 (276)
T 3kw8_A 152 IVFNDM-------------------------TINNRKPH-------TGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHR 198 (276)
T ss_dssp EEEETT-------------------------EETTCCTT-------CCCCEEEETTCEEEEEEEEESS-CCEEEEETTCC
T ss_pred EEeccc-------------------------ccceeccc-------CCCCEEEecCCEEEEEEecCCC-cceeEEEccce
Confidence 998764 79999753 4578999999999999999996 47789999999
Q ss_pred eEEEEeCCccc----CceEEeEEEECCCceEEEEEEeCC--CCCCceEEEEeeecccCCCCCCCCceEEEEEEecC
Q 008109 245 LTVVEVDAVYV----KPFETETLVITPGQTTNVLLETKP--HYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKP 314 (577)
Q Consensus 245 ~~via~DG~~v----~P~~~d~l~l~pgeR~dv~v~~~~--~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~ 314 (577)
|.+++ ||... .+..+|++.|.|||++++.+++++ .+ |.|+++|+...-.. ....+.+.+...
T Consensus 199 f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~np--G~w~~HCH~~~H~~-----~GM~g~~~V~~~ 266 (276)
T 3kw8_A 199 WADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGA--GAWMYHCHVQSHSD-----MGMVGLFLVKKP 266 (276)
T ss_dssp EESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCS--EEEEEEECSHHHHH-----TTCEEEEEEECT
T ss_pred eEEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCC--CeEEEECCCchHhh-----CCCeEEEEEeCC
Confidence 99875 77543 246789999999999999999985 23 99999999633211 234566777643
No 28
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=7.9e-44 Score=365.69 Aligned_cols=267 Identities=18% Similarity=0.216 Sum_probs=210.6
Q ss_pred eeeeEEEEEEEEEEEecc-CceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCcc
Q 008109 26 LAITRHYKFNVELKNVTR-LCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYIT 104 (577)
Q Consensus 26 ~~~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~t 104 (577)
.+.+++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++......||.++++
T Consensus 29 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~~~~ 105 (333)
T 1mzy_A 29 GPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGGGLT 105 (333)
T ss_dssp SCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGGGGC
T ss_pred CCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCCcee
Confidence 468999999999999987 5999999999999999999999999999999999 578999999988754456666677
Q ss_pred ccccCCCCeEEEEEEECCCceeeEEeccccc-----cc-ccceEeEEEeCCCCCCCCC---CCCCCeeeEEeecccccc-
Q 008109 105 QCPIQTGQSYIYNFTIVGQRGTLWWHAHISW-----LR-STLYGPIIILPKRGIPYPF---AKPYKEVPIVFGEWFKSD- 174 (577)
Q Consensus 105 q~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~-----~~-~Gl~G~liV~~~~~~~~~~---~~~~~e~~l~~~d~~~~~- 174 (577)
| |.||++++|+|++ +++||||||||.++ +. +||+|+|||++++....+. ..+|+|++|+++||++..
T Consensus 106 ~--i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~~ 182 (333)
T 1mzy_A 106 L--INPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYIPKD 182 (333)
T ss_dssp C--BCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBC
T ss_pred E--eCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCCccchheeeeeeeeccCcc
Confidence 5 9999999999998 78999999999974 54 8999999999875432111 145899999999998831
Q ss_pred -HH---------HHHHH--hhhCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcC
Q 008109 175 -TE---------AIINQ--ALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIAN 242 (577)
Q Consensus 175 -~~---------~~~~~--~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~g 242 (577)
.. ..+.. ....+ ..++.++|||+.+++. ..+.+++++|++||||++|.+....+ ..+++
T Consensus 183 ~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ING~~~~~~-----~~~~l~v~~Ger~Rl~n~~~~~~~~~-h~i~~ 253 (333)
T 1mzy_A 183 EDGTYMRFSDPSEGYEDMVAVMDT---LIPSHIVFNGAVGALT-----GEGALKAKVGDNVLFVHSQPNRDSRP-HLIGG 253 (333)
T ss_dssp TTSCBCCCSSHHHHHHHHHHHHTT---TCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEESSSCBCE-EEETC
T ss_pred ccccccccccccccccchhHHhhc---cCCcEEEECCcccccC-----CCcceEecCCCEEEEEECCCCCcccc-EEECC
Confidence 11 01100 01111 3568999999986431 14679999999988887776644333 34789
Q ss_pred ceeEEEEeCCcccC-ce-EEeEEEECCCceEEEEEEeCCCCCCceEEEEeeecccCCCCCCCCceEEEEEEecCC
Q 008109 243 HTLTVVEVDAVYVK-PF-ETETLVITPGQTTNVLLETKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPL 315 (577)
Q Consensus 243 h~~~via~DG~~v~-P~-~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~ 315 (577)
|.++||+ ||.+++ |. .+|++.|.||||+||+|+++++ |+|+++|+...... .....++++|.+..
T Consensus 254 h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~p---G~y~~~ch~~~h~~----~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 254 HGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQP---GVYAYVNHNLIEAV----HKGATAHVLVEGEW 320 (333)
T ss_dssp CEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCSC---EEEEEEESSHHHHH----TTCCEEEEEEESCC
T ss_pred CCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCCC---EEEEEecChhhhHh----hCCCEEEEEEcCCC
Confidence 9999999 999985 44 4899999999999999999987 99999999754320 13567899998654
No 29
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=3.2e-44 Score=361.52 Aligned_cols=247 Identities=18% Similarity=0.242 Sum_probs=196.4
Q ss_pred hcccceeeeeEEEEEEEEEEEeccCceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCC
Q 008109 20 LLPESVLAITRHYKFNVELKNVTRLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADG 99 (577)
Q Consensus 20 ~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG 99 (577)
.++..+.+.+|+|+|.+++..... ..+.++.+||++|||+||+++||+|+|+|+|+|++++||||||+++... +||
T Consensus 20 ~~p~~~~~~~~~~~~~a~~~~~~~--~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~--~DG 95 (299)
T 3t9w_A 20 HMPVRAQGTTRRITMYAEKISDEL--YGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYDVN--SDG 95 (299)
T ss_dssp -------CCEEEEEEEEEEEETTE--EEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSC
T ss_pred CCCcccCCCEEEEEEEEEecCCCc--eeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccCCc--cCC
Confidence 356667899999999998764222 3445566799999999999999999999999999999999999998754 999
Q ss_pred CCCccccccCCCCeEEEEEEEC------------CCceeeEEeccccccc-------ccceEeEEEeCCCCCCCCCCCCC
Q 008109 100 PAYITQCPIQTGQSYIYNFTIV------------GQRGTLWWHAHISWLR-------STLYGPIIILPKRGIPYPFAKPY 160 (577)
Q Consensus 100 v~~~tq~~i~PG~~~~Y~~~~~------------~~~Gt~wYH~H~~~~~-------~Gl~G~liV~~~~~~~~~~~~~~ 160 (577)
++ ++||+|+||++|+|+|+++ .++||||||||.+++. +||+|+|||+++.+. .+|
T Consensus 96 ~~-~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~-----~~d 169 (299)
T 3t9w_A 96 TL-MNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL-----LPK 169 (299)
T ss_dssp CT-TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCS
T ss_pred Cc-cccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEeccccc-----Ccc
Confidence 97 8999999999999999974 2689999999987642 699999999998753 348
Q ss_pred CeeeEEeeccccccHHHHHHHhhhCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEE
Q 008109 161 KEVPIVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSI 240 (577)
Q Consensus 161 ~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i 240 (577)
+|++|++++|. +||+..+ ..+.++++.|++|||||+|++.. .+.|||
T Consensus 170 ~e~~l~~~~~~-------------------------~Ng~~~~-------~~p~l~v~~Ge~Vr~~liN~~~~-~HpfHl 216 (299)
T 3t9w_A 170 RQFTVVFNDMM-------------------------INNRAHH-------DAPTFEANLGERVEWIAIGHGSN-FHTFHL 216 (299)
T ss_dssp EEEEEEEETTE-------------------------ETTCCTT-------CCCEEEEETTCEEEEEEEEESSC-CCEEEE
T ss_pred ccceeeeeeee-------------------------ecCcccc-------ccccceecCCCEEEEEEEecccc-ceeeeE
Confidence 99999998753 6777642 45789999999999999999965 467999
Q ss_pred cCceeEEEEeCCcccC---ceEEeEEEECCCceEEEEEEeCCCCCCceEEEEeeecccCCCCCCCCceEEEEEEecC
Q 008109 241 ANHTLTVVEVDAVYVK---PFETETLVITPGQTTNVLLETKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKP 314 (577)
Q Consensus 241 ~gh~~~via~DG~~v~---P~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~ 314 (577)
+||.|+++..|+.... +..+|++.|.||||++++|.+.+...-|.|.++|+...-.. ....+++.+...
T Consensus 217 HGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~~H~~-----~GM~~~f~V~~~ 288 (299)
T 3t9w_A 217 HGHRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQNHSD-----MGMAGMFLVRNA 288 (299)
T ss_dssp TTCCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSHHHHH-----TTCEEEEEEECT
T ss_pred ecceEEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCHHHHh-----cCCeEEEEEECC
Confidence 9999999998887663 45689999999999999987654321299999998643221 234566777643
No 30
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=3.2e-44 Score=364.36 Aligned_cols=242 Identities=19% Similarity=0.262 Sum_probs=199.5
Q ss_pred cceeeeeEEEEEEEEEEEeccCc-eeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCC
Q 008109 23 ESVLAITRHYKFNVELKNVTRLC-HTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPA 101 (577)
Q Consensus 23 ~~~~~~~~~~~l~~~~~~~~~~g-~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~ 101 (577)
+.+.+.+|+++|.+++ -++| ..+.++.+||++|||+||+++||+|+|+|+|+|++++||||||+++... +||++
T Consensus 7 ~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~--~dG~~ 81 (313)
T 3tas_A 7 APAGGEVKRIKLYAER---LGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEIS--SDGTK 81 (313)
T ss_dssp CCCCCCEEEEEEEEEE---CGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCST
T ss_pred CCCCceEEEEEEEEEE---cCCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCCcc--CCCCc
Confidence 3446788999998753 3455 4456678899999999999999999999999999999999999998765 99998
Q ss_pred CccccccCCCCeEEEEEEEC------------CCceeeEEeccccccc-------ccceEeEEEeCCCCCCCCCCCCCCe
Q 008109 102 YITQCPIQTGQSYIYNFTIV------------GQRGTLWWHAHISWLR-------STLYGPIIILPKRGIPYPFAKPYKE 162 (577)
Q Consensus 102 ~~tq~~i~PG~~~~Y~~~~~------------~~~Gt~wYH~H~~~~~-------~Gl~G~liV~~~~~~~~~~~~~~~e 162 (577)
++||+|.||++|+|+|++. .++||||||||..++. +||+|+|||+++.+. .+|+|
T Consensus 82 -~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~d~e 155 (313)
T 3tas_A 82 -QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDRT 155 (313)
T ss_dssp -TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CCSEE
T ss_pred -cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc-----ccccc
Confidence 6999999999999999862 3689999999987642 799999999998753 35899
Q ss_pred eeEEeeccccccHHHHHHHhhhCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcC
Q 008109 163 VPIVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIAN 242 (577)
Q Consensus 163 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~g 242 (577)
++|+++|| ++||+..+ ..+.++++.|++|||||+|++. ..+.|||+|
T Consensus 156 ~~l~~~d~-------------------------t~Ng~~~~-------~~~~l~v~~Ge~vr~~liN~g~-~~hpfHlHG 202 (313)
T 3tas_A 156 HTIVFNDM-------------------------TINNRPAH-------TGPDFEATVGDRVEFVMITHGE-YYHTFHLHG 202 (313)
T ss_dssp EEEEEETT-------------------------EETTCCTT-------CCCCEEEETTCEEEEEEEEESS-CCEEEEETT
T ss_pred ceeeccch-------------------------hcccCCcc-------cccccccccCCEEEEEEecccc-cceeeeecC
Confidence 99999987 35666543 3467999999999999999995 567899999
Q ss_pred ceeEEEEeCCccc---CceEEeEEEECCCceEEEEEEeCCCCCCceEEEEeeecccCCCCCCCCceEEEEEEec
Q 008109 243 HTLTVVEVDAVYV---KPFETETLVITPGQTTNVLLETKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEK 313 (577)
Q Consensus 243 h~~~via~DG~~v---~P~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~ 313 (577)
|.|++++.||... .|..+|++.|.||||++++|.+.+...-|.|.++|+...-.. ....+++.++.
T Consensus 203 h~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H~~-----~GM~~~f~V~~ 271 (313)
T 3tas_A 203 HRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHSD-----MGMVGLFLVKK 271 (313)
T ss_dssp CCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHH-----TTCEEEEEEEC
T ss_pred CeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCChHHHH-----CCCeEEEEEEC
Confidence 9999999998876 478899999999999999998765322299999999643221 24467777764
No 31
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=4.8e-43 Score=360.49 Aligned_cols=268 Identities=22% Similarity=0.279 Sum_probs=204.7
Q ss_pred eeeeEEEEEEEEEEEec--cCceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCc
Q 008109 26 LAITRHYKFNVELKNVT--RLCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYI 103 (577)
Q Consensus 26 ~~~~~~~~l~~~~~~~~--~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 103 (577)
.+.+++|+|++++..++ +||..+.+|+|||++|||+|++++||+|+|+|+|.+. ++||||+++.+..++||.+.+
T Consensus 29 ~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~~~ 105 (336)
T 1oe1_A 29 GPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGAKL 105 (336)
T ss_dssp CCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGGGG
T ss_pred CCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCcce
Confidence 45789999999998876 4599999999999999999999999999999999973 456666666655567777777
Q ss_pred cccccCCCCeEEEEEEECCCceeeEEeccccc----cc-ccceEeEEEeCCCCCCCCC---CCCCCeeeEEeeccccccH
Q 008109 104 TQCPIQTGQSYIYNFTIVGQRGTLWWHAHISW----LR-STLYGPIIILPKRGIPYPF---AKPYKEVPIVFGEWFKSDT 175 (577)
Q Consensus 104 tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~---~~~~~e~~l~~~d~~~~~~ 175 (577)
+| |.||++++|+|++ +++||||||||.++ +. +||+|+|||++++....+. ..+|+|++|+++||++...
T Consensus 106 ~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~~ 182 (336)
T 1oe1_A 106 TN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPKG 182 (336)
T ss_dssp CC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBC
T ss_pred EE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeeccc
Confidence 76 9999999999998 78999999999975 33 8999999999876432111 1468999999999987411
Q ss_pred --HHH---------HHHhhhCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEE-EEEcCc
Q 008109 176 --EAI---------INQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLF-FSIANH 243 (577)
Q Consensus 176 --~~~---------~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~-~~i~gh 243 (577)
..+ +...+.. .....++.++|||+.+++.+ .+.+++++|++||| +|++..+.+. +.|++|
T Consensus 183 ~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~liNG~~~~~~~-----~~~l~v~~GervRl--in~~~~~~~~~~~i~gh 254 (336)
T 1oe1_A 183 PDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGALTG-----ANALTAKVGETVLL--IHSQANRDTRPHLIGGH 254 (336)
T ss_dssp TTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTTSG-----GGCEEEETTCEEEE--EEEESSSCBCEEETTCC
T ss_pred cCCceeecccccccccchhhH-hhcCCCCEEEECCeeccCCC-----CcceEcCCCCEEEE--EecCCCCccceEEECCc
Confidence 100 0000000 00134689999999864311 36799999998776 5555555444 446999
Q ss_pred eeEEEEeCCcccCce--EEeEEEECCCceEEEEEEeCCCCCCceEEEEeeecccCCCCCCCCceEEEEEEecCC
Q 008109 244 TLTVVEVDAVYVKPF--ETETLVITPGQTTNVLLETKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPL 315 (577)
Q Consensus 244 ~~~via~DG~~v~P~--~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~ 315 (577)
.++|++ ||.+++|. .++++.|.||||+||+|+++++ |.|+++++..... ......++++|++..
T Consensus 255 ~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~p---G~y~~~~h~~~~~----~~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 255 GDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQP---GVYAYLNHNLIEA----FELGAAGHIKVEGKW 320 (336)
T ss_dssp EEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCSC---EEEEEEESSHHHH----HTTSCEEEEEEESCC
T ss_pred CceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCCC---ceEEEEechhhcc----ccCCCeEEEEECCCC
Confidence 999997 99999664 4689999999999999999997 9999999864321 013567999998754
No 32
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=1.4e-42 Score=357.62 Aligned_cols=268 Identities=18% Similarity=0.252 Sum_probs=206.2
Q ss_pred eeeeEEEEEEEEEEEecc--CceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCc
Q 008109 26 LAITRHYKFNVELKNVTR--LCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYI 103 (577)
Q Consensus 26 ~~~~~~~~l~~~~~~~~~--~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 103 (577)
.+.+++|+|++++..+++ ||..+.+|+|||++|||+|++++||+|+|+|+|.+ +++||||+++......||...+
T Consensus 35 ~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~~~ 111 (340)
T 2bw4_A 35 GPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGGAL 111 (340)
T ss_dssp SCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGGGG
T ss_pred CCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCccc
Confidence 468899999999998885 49999999999999999999999999999999998 7799999998765434454556
Q ss_pred cccccCCCCeEEEEEEECCCceeeEEeccccc----cc-ccceEeEEEeCCCCCC----CCCCCCCCeeeEEeeccccc-
Q 008109 104 TQCPIQTGQSYIYNFTIVGQRGTLWWHAHISW----LR-STLYGPIIILPKRGIP----YPFAKPYKEVPIVFGEWFKS- 173 (577)
Q Consensus 104 tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~~~d~~~~- 173 (577)
+| |.||++++|+|++ .++||||||||.++ +. +||+|+|||++++... .+. .+|+|++|+++||++.
T Consensus 112 ~~--i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~~~ 187 (340)
T 2bw4_A 112 TQ--VNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYVPK 187 (340)
T ss_dssp CC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECCCB
T ss_pred eE--eCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeeecc
Confidence 65 9999999999998 68999999999874 44 8999999999876321 121 4688999999999873
Q ss_pred -cHH---------HHHHHhhhCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcCc
Q 008109 174 -DTE---------AIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANH 243 (577)
Q Consensus 174 -~~~---------~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh 243 (577)
... ......... .....++.++|||+.++.. ..+.+++++|++|||+++|.+....+ .++++|
T Consensus 188 ~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~~-----~~~~l~v~~G~r~Rl~n~~~~~~~~~-~~i~gh 260 (340)
T 2bw4_A 188 DEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGALT-----GDHALTAAVGERVLVVHSQANRDTRP-HLIGGH 260 (340)
T ss_dssp CTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEESSSCBCE-EEETCC
T ss_pred ccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCcc-----CCCceEcCCCCEEEEEECCCCCccce-EEecCc
Confidence 111 111110000 0012458999999986421 14789999999888777666533333 458999
Q ss_pred eeEEEEeCCcccC-ce-EEeEEEECCCceEEEEEEeCCCCCCceEEEEeeecccCCCCCCCCceEEEEEEecCC
Q 008109 244 TLTVVEVDAVYVK-PF-ETETLVITPGQTTNVLLETKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPL 315 (577)
Q Consensus 244 ~~~via~DG~~v~-P~-~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~ 315 (577)
.|+|++ ||.++. |. .+|++.|.||||+||+|+++++ |+|+++|+...... .....++++|++..
T Consensus 261 ~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~p---G~y~~~~h~~~~h~----~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 261 GDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQP---GVYAYVNHNLIEAF----ELGAAGHFKVTGEW 326 (340)
T ss_dssp EEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCSC---EEEEEEESSHHHHH----TTSCEEEEEEESCC
T ss_pred ceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCCC---eeeEEEcCchHHHH----hCCCEEEEEECCCC
Confidence 999997 999884 54 5899999999999999999996 99999998752110 12457899998754
No 33
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=2.5e-40 Score=368.46 Aligned_cols=250 Identities=16% Similarity=0.184 Sum_probs=186.1
Q ss_pred eeeeEEEEEEEEEEEeccC-------------c-e--eeEEEEE----------------CCCCCCCeEEEecCCEEEEE
Q 008109 26 LAITRHYKFNVELKNVTRL-------------C-H--TKTLVSV----------------NGQFPGPRIVAREGDRLLIK 73 (577)
Q Consensus 26 ~~~~~~~~l~~~~~~~~~~-------------g-~--~~~~~~~----------------ng~~pgP~i~v~~Gd~v~v~ 73 (577)
.+++|+|.+-|++..+... | + +...+.| ++++|||+|++++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 4788999999999876543 1 1 1122344 34789999999999999999
Q ss_pred EEeCCCCceeeeEcceeccCCCCCCCCCCcc--------ccccCCCCeEEEEEEECCC-----ce----eeEEeccccc-
Q 008109 74 VVNHVQHNISIHWHGIRQLRSGWADGPAYIT--------QCPIQTGQSYIYNFTIVGQ-----RG----TLWWHAHISW- 135 (577)
Q Consensus 74 l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~t--------q~~i~PG~~~~Y~~~~~~~-----~G----t~wYH~H~~~- 135 (577)
|+|.|+++++|||||++++.. +||+|+++ ||+|+||++|+|+|+++++ +| |||||||.+.
T Consensus 83 ~~N~l~~~~siH~HGl~~~~~--~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~ 160 (647)
T 1sdd_B 83 FKNLASRPYSLHAHGLSYEKS--SEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPE 160 (647)
T ss_dssp ECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHH
T ss_pred EEECCCCceEEecCcceeCCC--CCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCc
Confidence 999999999999999999754 99999887 9999999999999998654 57 9999999964
Q ss_pred -cc-ccceEeEEEeCCCCCCC--CCCCCCCeeeEEee------ccccccHHHHHHHhhhCCCCCCCCCeEEEcCcCCCCC
Q 008109 136 -LR-STLYGPIIILPKRGIPY--PFAKPYKEVPIVFG------EWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLY 205 (577)
Q Consensus 136 -~~-~Gl~G~liV~~~~~~~~--~~~~~~~e~~l~~~------d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~ 205 (577)
|. +||+|+|||+++..... ..+..++|++|+++ ||+++.......... .......++.++|||+.+
T Consensus 161 ~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~-~~~~~~~~~~~~iNG~~~--- 236 (647)
T 1sdd_B 161 KDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRA-SSEVKNSHEFHAINGMIY--- 236 (647)
T ss_dssp HHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC----------------CCCEEEEETTBSS---
T ss_pred ccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccC-CcchhhcCceeccCCEec---
Confidence 33 89999999999865321 12234689999999 787765432100001 011123468999999974
Q ss_pred CCCCCceeEEEEecCCEEEEEEEecCCCC-cEEEEEcCceeEEEEeCCcccCceEEeEEEECCCceEEEEEEeCCCCCCc
Q 008109 206 NCSAKDTFKLKVKSGKTYLLRLVNSALND-DLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTNVLLETKPHYPSA 284 (577)
Q Consensus 206 ~~~~~~~~~l~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pgeR~dv~v~~~~~~~~g 284 (577)
+.+.+++++|++|||||+|+++.. .+.||+|||.|++++.|| ..+|++.|.||||+||+|+++++ |
T Consensus 237 -----~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~pg~r~~v~~~~~~p---G 303 (647)
T 1sdd_B 237 -----NLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLPGSFKTLEMKASKP---G 303 (647)
T ss_dssp -----CCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECTTEEEEEEEECCSS---E
T ss_pred -----CCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEECCCeEEEEEEEeccc---e
Confidence 237799999999999999999765 789999999999999886 47899999999999999999997 9
Q ss_pred eEEEEeeecc
Q 008109 285 TFFMTARPYV 294 (577)
Q Consensus 285 ~y~l~~~~~~ 294 (577)
.|+++|+...
T Consensus 304 ~w~~hch~~~ 313 (647)
T 1sdd_B 304 WWLLDTEVGE 313 (647)
T ss_dssp EEEEECCCHH
T ss_pred EeecccCccc
Confidence 9999999643
No 34
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=1e-39 Score=334.76 Aligned_cols=235 Identities=19% Similarity=0.277 Sum_probs=191.0
Q ss_pred eeeEEEEEEEEEEEeccCceeeE-EEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccc
Q 008109 27 AITRHYKFNVELKNVTRLCHTKT-LVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQ 105 (577)
Q Consensus 27 ~~~~~~~l~~~~~~~~~~g~~~~-~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq 105 (577)
+.+++|+|++++. ++|+... .+.+||++|||+|+|++||+|+|+|+|.++++++|||||+++. .++||++ ++|
T Consensus 46 g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~-~t~ 119 (343)
T 3cg8_A 46 GEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTA-MNK 119 (343)
T ss_dssp CCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCT-TTT
T ss_pred CeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCcc-ccc
Confidence 5779999999875 3453221 2235899999999999999999999999999999999999987 3599999 899
Q ss_pred cccCCCCeEEEEEEECC------------CceeeEEeccccc------cc-ccceEeEEEeCCCCCCCCCCCCCCeeeEE
Q 008109 106 CPIQTGQSYIYNFTIVG------------QRGTLWWHAHISW------LR-STLYGPIIILPKRGIPYPFAKPYKEVPIV 166 (577)
Q Consensus 106 ~~i~PG~~~~Y~~~~~~------------~~Gt~wYH~H~~~------~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~ 166 (577)
|+|.||++++|+|++.+ ++|+||||||..+ +. +||+|++||+++.+. .+|+|++|+
T Consensus 120 ~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~-----~pd~e~~l~ 194 (343)
T 3cg8_A 120 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTIV 194 (343)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEEE
T ss_pred ccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC-----CCCceEEEE
Confidence 99999999999999832 3599999999743 33 899999999988653 247899999
Q ss_pred eeccccccHHHHHHHhhhCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeE
Q 008109 167 FGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLT 246 (577)
Q Consensus 167 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~ 246 (577)
++|| +|||+.++ ..+.++++.|++|||||+|.+. ..+.|||+||.|+
T Consensus 195 ~~d~-------------------------~iNG~~~~-------~~~~l~v~~Ge~vri~l~N~g~-~~HpfHlHGh~f~ 241 (343)
T 3cg8_A 195 FNDM-------------------------TINNRKPH-------TGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHRWA 241 (343)
T ss_dssp EETT-------------------------EETTCCTT-------CCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCEE
T ss_pred cccc-------------------------eecccCCC-------CCccEEeCCCCEEEEEEEcCCc-cccccEecCcEEE
Confidence 9875 69998742 3468999999999999999996 5678999999999
Q ss_pred EEEeCCcccC----ceEEeEEEECCCceEEEEEEeC---CCCCCceEEEEeeecccCCCCCCCCceEEEEEEecC
Q 008109 247 VVEVDAVYVK----PFETETLVITPGQTTNVLLETK---PHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKP 314 (577)
Q Consensus 247 via~DG~~v~----P~~~d~l~l~pgeR~dv~v~~~---~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~ 314 (577)
|+ .||.+.. +..+|++.|.|||+++++++++ ++ |.|+++|+..... .....+++.+...
T Consensus 242 v~-~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~p---G~w~~HCHi~~H~-----~~GM~g~~~V~~~ 307 (343)
T 3cg8_A 242 DN-RTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGA---GAWMYHCHVQSHS-----DMGMVGLFLVKKP 307 (343)
T ss_dssp SS-SSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCS---EEEEEEECSHHHH-----HTTCEEEEEEECT
T ss_pred Ee-ccCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCC---eeEEEeCCCHHHH-----hccCcEEEEEecC
Confidence 97 4776543 4578999999999999999974 44 9999999964321 1245677777643
No 35
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=7.2e-42 Score=346.19 Aligned_cols=212 Identities=18% Similarity=0.257 Sum_probs=157.7
Q ss_pred EEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCC------cc--ccccCCCCeEEEEEEEC
Q 008109 50 LVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAY------IT--QCPIQTGQSYIYNFTIV 121 (577)
Q Consensus 50 ~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~------~t--q~~i~PG~~~~Y~~~~~ 121 (577)
..++| ++|||+|+|++||+|+|+|+|.++++++|||||++++.. +||++. ++ ||+|+||++|+|+|+++
T Consensus 51 ~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~--~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~ 127 (306)
T 1sdd_A 51 QSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKF--SEGASYSDHTLPMEKMDDAVAPGQEYTYEWIIS 127 (306)
T ss_dssp CCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTT--TSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECC
T ss_pred ccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccc--cCCCccCCCCcccccCCCccCCCCeEEEEEEeC
Confidence 34578 689999999999999999999999999999999996543 566554 33 79999999999999985
Q ss_pred CC---------ceeeEEeccccc--cc-ccceEeEEEeCCCCCCC-CC-CCCCCeeeEEeeccccccHHHHHHHhhhCCC
Q 008109 122 GQ---------RGTLWWHAHISW--LR-STLYGPIIILPKRGIPY-PF-AKPYKEVPIVFGEWFKSDTEAIINQALQTGG 187 (577)
Q Consensus 122 ~~---------~Gt~wYH~H~~~--~~-~Gl~G~liV~~~~~~~~-~~-~~~~~e~~l~~~d~~~~~~~~~~~~~~~~~~ 187 (577)
++ +||||||||... +. +||+|+|||+++..... +. ...|+|++|+++||.... ...
T Consensus 128 ~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~~~d~d~~~---------~~~- 197 (306)
T 1sdd_A 128 EHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDESK---------SWN- 197 (306)
T ss_dssp GGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCBCCEEETTS---------SSS-
T ss_pred CccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccceEEEEEEeccccc---------ccc-
Confidence 44 379999999876 33 89999999998753211 11 135789999999974321 111
Q ss_pred CCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCC-CcEEEEEcCceeEEEEeCCcccCceEEeEEEEC
Q 008109 188 GPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALN-DDLFFSIANHTLTVVEVDAVYVKPFETETLVIT 266 (577)
Q Consensus 188 ~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~ 266 (577)
...++.++|||+.+. ..|.+++++|++|||||+|++.. ..+.|||+||.|.+ || ..+|++.|.
T Consensus 198 -~~~~~~~~ING~~~~-------~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~l~ 261 (306)
T 1sdd_A 198 -QTSSLMYTVNGYVNG-------TMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAITLV 261 (306)
T ss_dssp -CCCCEEECSSSCCSS-------CCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCCEE
T ss_pred -cCCCcceeeCCEecC-------CCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEEEC
Confidence 123578999999752 24679999999999999999986 56779999999975 87 358999999
Q ss_pred CCceEEEEEEeCCCCCCceEEEEeeec
Q 008109 267 PGQTTNVLLETKPHYPSATFFMTARPY 293 (577)
Q Consensus 267 pgeR~dv~v~~~~~~~~g~y~l~~~~~ 293 (577)
||||++|+|+++++ |.|+++|+..
T Consensus 262 pger~~v~~~~~~p---G~~~~hch~~ 285 (306)
T 1sdd_A 262 SATSTTANMTVSPE---GRWTIASLIP 285 (306)
T ss_dssp TTCCBC-----------CCCCCBCCST
T ss_pred CCcEEEEEEEcCCC---eEEEEEeCCh
Confidence 99999999999987 9999999864
No 36
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=2.8e-38 Score=337.98 Aligned_cols=260 Identities=21% Similarity=0.295 Sum_probs=211.1
Q ss_pred eeeeEEEEEEEEEEEecc-CceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCC--CceeeeEcceeccCCCCCCCCCC
Q 008109 26 LAITRHYKFNVELKNVTR-LCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQ--HNISIHWHGIRQLRSGWADGPAY 102 (577)
Q Consensus 26 ~~~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~--~~~~iH~HG~~~~~~~~~DGv~~ 102 (577)
.+.++.|+|++++....+ +|....+|+|||++|||+|++++||+++|+|+|.+. ..++|||||+.. +||+|.
T Consensus 160 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~-----~DG~~~ 234 (447)
T 2dv6_A 160 QAKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAA 234 (447)
T ss_dssp CCCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGG
T ss_pred CCcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccccC-----CCCCCc
Confidence 356778899888777766 588899999999999999999999999999999985 689999999852 799886
Q ss_pred ccccccCCCCeEEEEEEECCCceeeEEecccc---ccc-ccceEeEEEeCCCCCCCCCCCCCCeeeEEeeccccccHHHH
Q 008109 103 ITQCPIQTGQSYIYNFTIVGQRGTLWWHAHIS---WLR-STLYGPIIILPKRGIPYPFAKPYKEVPIVFGEWFKSDTEAI 178 (577)
Q Consensus 103 ~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~---~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~ 178 (577)
.+| |.||++++|+|++ +++|+||||||.+ .+. .||+|+|+|+++.. ++..|+|++++++||++......
T Consensus 235 ~~~--i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~----~P~~d~~~~~~~~~~~~~~~~~~ 307 (447)
T 2dv6_A 235 FTQ--TDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG----LPQVDREFYVMQGEIYTVKSFGT 307 (447)
T ss_dssp GCC--BCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC----SCCCSEEEEEEEEEECBSSCTTC
T ss_pred cEE--eCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC----CCCCCeeEEEEecccccCCcccc
Confidence 554 9999999999997 7899999999974 233 89999999998753 22468899999999987532100
Q ss_pred -------HHHhhhCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEeC
Q 008109 179 -------INQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVD 251 (577)
Q Consensus 179 -------~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~D 251 (577)
... . .+ ..++.++|||+.+++.. ...+++++|++|||||+|++....+.|||+||+|+||+.|
T Consensus 308 ~g~~~~~~~~-~-~~---~~~~~~~iNG~~~~~~~-----~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~d 377 (447)
T 2dv6_A 308 SGEQEMDYEK-L-IN---EKPEYFLFNGSVGSLTR-----SHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSL 377 (447)
T ss_dssp CEECCBBHHH-H-HT---TCCSEEEETTSTTCCCC-----CCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGG
T ss_pred cccccCChHH-h-hc---cCCCEEEECCcccCCCC-----CcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcC
Confidence 001 1 11 23588999999875421 2469999999999999999988888999999999999999
Q ss_pred CcccCc-e-EEeEEEECCCceEEEEEEeCCCCCCceEEEEeeecccCCCCCCCCceEEEEEEecCC
Q 008109 252 AVYVKP-F-ETETLVITPGQTTNVLLETKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPL 315 (577)
Q Consensus 252 G~~v~P-~-~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~ 315 (577)
|.++.| . .+|++.|.||||++|+|+++++ |.|+|+|+..... .....++++|++..
T Consensus 378 G~~~~~p~~~~dtv~l~pg~r~~i~~~~~~p---G~~~~hch~~~h~-----~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 378 GSVVSPPLIGVQTVSVPPGGATIVDFKIDRA---GRYILVDHALSRL-----EHGLVGFLNVDGPK 435 (447)
T ss_dssp GCSSSCCEEEESEEEECTTEEEEEEEECCSC---EEEEEEESSGGGG-----GGTCCEEEEECSCS
T ss_pred CcccCCCcccccEEEECCCcEEEEEEECCCC---EEEEEEecCcCcc-----ccCCEEEEEEeCCC
Confidence 999854 4 5899999999999999999987 9999999865432 13457899997654
No 37
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=6.3e-40 Score=367.14 Aligned_cols=252 Identities=13% Similarity=0.103 Sum_probs=196.4
Q ss_pred eeeeeEEEEEEEEEEEe--ccCce----------------e-eEEEEE-----CC-----------CCCCCeEEEecCCE
Q 008109 25 VLAITRHYKFNVELKNV--TRLCH----------------T-KTLVSV-----NG-----------QFPGPRIVAREGDR 69 (577)
Q Consensus 25 ~~~~~~~~~l~~~~~~~--~~~g~----------------~-~~~~~~-----ng-----------~~pgP~i~v~~Gd~ 69 (577)
..+.+|+|.|.|++... ++++. . ..++.| ++ ++|||+||+++||+
T Consensus 129 ~~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~ 208 (770)
T 2r7e_B 129 FQKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDN 208 (770)
T ss_dssp CCCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSC
T ss_pred CCCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCE
Confidence 46889999999999874 45542 1 122333 33 68999999999999
Q ss_pred EEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccccccCCCCeEEEEEEECC---------CceeeEEecccccc--c-
Q 008109 70 LLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVG---------QRGTLWWHAHISWL--R- 137 (577)
Q Consensus 70 v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~---------~~Gt~wYH~H~~~~--~- 137 (577)
|+|+|+|.++++++|||||++++.... ||+++ +||+|+||++|+|+|++++ ++||||||||.+.+ .
T Consensus 209 v~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~ 286 (770)
T 2r7e_B 209 IMVTFRNQASRPYSFYSSLISYEEDQR-QGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVH 286 (770)
T ss_dssp EEEEEECCSSSCCCCCBTTCCCCCCSS-SCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHH
T ss_pred EEEEEEECCCCCcceeecccccccccC-CCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHh
Confidence 999999999999999999999998742 69998 9999999999999999854 89999999999874 3
Q ss_pred ccceEeEEEeCCCCCCC--CCCCCCCeeeEEeec------cccccHHHHHHHhh--hCCCC---CCCCCeEEEcCcCCCC
Q 008109 138 STLYGPIIILPKRGIPY--PFAKPYKEVPIVFGE------WFKSDTEAIINQAL--QTGGG---PNVSDAYTFNGLPGPL 204 (577)
Q Consensus 138 ~Gl~G~liV~~~~~~~~--~~~~~~~e~~l~~~d------~~~~~~~~~~~~~~--~~~~~---~~~~~~~liNG~~~~~ 204 (577)
+||+|+|||+++..... .....++|++|++++ |+++.....+.... ..... ....+.++|||+...
T Consensus 287 ~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~~~~~~p~~~~~~d~~~~~~~~~~~ING~~~~- 365 (770)
T 2r7e_B 287 SGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENMERNCRAPCNIQMEDPTFKENYRFHAINGYIMD- 365 (770)
T ss_dssp TSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGSSCSCCSSCCCSSSSSSTTTSCEECTTSCTTT-
T ss_pred CCceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccchhhcccCccccccCCccccccCCccccCCccCC-
Confidence 89999999999865321 112457899988754 54442211000000 00000 012356899999642
Q ss_pred CCCCCCceeEEEEecCCEEEEEEEecCCCC-cEEEEEcCceeEEEEeCCcccCceEEeEEEECCCceEEEEEEeCCCCCC
Q 008109 205 YNCSAKDTFKLKVKSGKTYLLRLVNSALND-DLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTNVLLETKPHYPS 283 (577)
Q Consensus 205 ~~~~~~~~~~l~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pgeR~dv~v~~~~~~~~ 283 (577)
..+.+++++|++|||||+|++... .+.||||||.|+|++.||. .+|++.|.||||++|+|+++++
T Consensus 366 ------~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad~p--- 431 (770)
T 2r7e_B 366 ------TLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPSKA--- 431 (770)
T ss_dssp ------TCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCSSC---
T ss_pred ------CCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeCCC---
Confidence 346789999999999999998653 7889999999999999974 8899999999999999999998
Q ss_pred ceEEEEeeec
Q 008109 284 ATFFMTARPY 293 (577)
Q Consensus 284 g~y~l~~~~~ 293 (577)
|.|.++|+..
T Consensus 432 G~w~~hcH~~ 441 (770)
T 2r7e_B 432 GIWRVECLIG 441 (770)
T ss_dssp BCCCBCCCSH
T ss_pred CceEEEeccc
Confidence 9999999864
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1.3e-36 Score=339.89 Aligned_cols=218 Identities=21% Similarity=0.267 Sum_probs=169.2
Q ss_pred CCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCC-----CCCCccccccCCCCeEEEEEEECCCce-----
Q 008109 56 QFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWAD-----GPAYITQCPIQTGQSYIYNFTIVGQRG----- 125 (577)
Q Consensus 56 ~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~D-----Gv~~~tq~~i~PG~~~~Y~~~~~~~~G----- 125 (577)
.+|||+||+++||+|+|+|+|.++++++|||||+++. ..|+| |+++++||+|.||++|+|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 6899999999999999999999999999999999985 45555 567788999999999999999976554
Q ss_pred ----eeEEeccccccc---ccceEeEEEeCCCCCC-CC-CCCCCCeeeEEeec------cccccHHHHHHHhhhCCC---
Q 008109 126 ----TLWWHAHISWLR---STLYGPIIILPKRGIP-YP-FAKPYKEVPIVFGE------WFKSDTEAIINQALQTGG--- 187 (577)
Q Consensus 126 ----t~wYH~H~~~~~---~Gl~G~liV~~~~~~~-~~-~~~~~~e~~l~~~d------~~~~~~~~~~~~~~~~~~--- 187 (577)
|||||||.+.+. +||+|+|||+++.... .. ....|+|++|++++ |++......+.. .....
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~~~~~~~~-~p~~v~~~ 605 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTENIQRFLP-NPAGVQLE 605 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHHHHHHHSS-SSSCSCCC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeeccccccccccccchhhccc-Cchhcccc
Confidence 999999998753 8999999999885421 11 12458999999965 544322211100 00000
Q ss_pred CC---CCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCC-CcEEEEEcCceeEEEEeCCcccCceEEeEE
Q 008109 188 GP---NVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALN-DDLFFSIANHTLTVVEVDAVYVKPFETETL 263 (577)
Q Consensus 188 ~~---~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~l 263 (577)
.+ .....++|||+... + .+ +.+++|++|||||+|+++. ..+.|||+||+|+|+ |..+|++
T Consensus 606 ~~~~~~~~~~~~ING~~~~----~---~~-l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~~Dtv 669 (742)
T 2r7e_A 606 DPEFQASNIMHSINGYVFD----S---LQ-LSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVYEDTL 669 (742)
T ss_dssp CHHHHGGGCCBCTTTTCSS----C---CC-CCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSSBCSS
T ss_pred cccccccCceeeecCcCCC----C---Cc-EEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------ccceeEE
Confidence 00 01134689999742 1 23 8999999999999998754 457899999999987 4678999
Q ss_pred EECCCceEEEEEEeCCCCCCceEEEEeeecc
Q 008109 264 VITPGQTTNVLLETKPHYPSATFFMTARPYV 294 (577)
Q Consensus 264 ~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~~ 294 (577)
.|.||||++|+|+++++ |.|+++|+...
T Consensus 670 ~l~Pg~~~~v~~~ad~p---G~w~~hcH~~~ 697 (742)
T 2r7e_A 670 TLFPFSGETVFMSMENP---GLWILGCHNSD 697 (742)
T ss_dssp CCCCCSSEECCEECCCC---CCSCCEECCCS
T ss_pred EECCCcEEEEEEEcCCC---eEEEEEeCCch
Confidence 99999999999999988 99999999643
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.96 E-value=2.5e-28 Score=244.70 Aligned_cols=233 Identities=16% Similarity=0.182 Sum_probs=163.0
Q ss_pred CeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEeCCcccCceEEeEEEECCCceEE
Q 008109 193 DAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTN 272 (577)
Q Consensus 193 ~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pgeR~d 272 (577)
..+++||+. +.|+|+++.|+++++|+.|..... +.+|+||.. ..+.||.+.. +...|.||++++
T Consensus 55 ~~~~~ng~~---------pgP~i~~~~Gd~v~v~~~N~~~~~-~~iH~HG~~--~~~~DG~p~~----~~~~i~PG~~~~ 118 (288)
T 3gdc_A 55 KGWSYNGRI---------PGPTLWAREGDALRIHFTNAGAHP-HTIHFHGVH--RATMDGTPGI----GAGSIAPGQSFT 118 (288)
T ss_dssp EEEEETTBS---------SCCEEEEETTCEEEEEEEECSSSC-BCCEESSCC--CGGGSCCTTS----TTCSBCTTCEEE
T ss_pred EEEEECCcc---------CCCcEEEeCCCEEEEEEEeCCCCc-ccEEecccc--ccccCCCCCc----cceeECCCCEEE
Confidence 678999985 458999999999999999998654 469999976 4578998541 345689999999
Q ss_pred EEEEeCCCCCCceEEEEeeecccCCCCCCCCceEEEEEEecCCCccccCCCCCCCCCcCCCCCCCCCccccccccccccc
Q 008109 273 VLLETKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSIKKLPLFKPILPPLNDTNFVTNFVNKLRS 352 (577)
Q Consensus 273 v~v~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~ 352 (577)
..++++++ |+||++++....... ......+.+.++.... .+.
T Consensus 119 y~f~~~~~---Gt~~yH~H~~~~~~~--~~~Gl~G~liV~~~~~-----------------~~~---------------- 160 (288)
T 3gdc_A 119 YEFDATPF---GTHLYHCHQSPLAPH--IAKGLYGGFIVEPKEG-----------------RPP---------------- 160 (288)
T ss_dssp EEEECCSC---EEEEEECCCSSHHHH--HHTTCEEEEEEECSSC-----------------CCC----------------
T ss_pred EEEEcCCC---ccEEEEecCcchHHH--HhCcCeEEEEEeCCcc-----------------CCC----------------
Confidence 99999776 999999986321000 0112344444442210 000
Q ss_pred cCCCCCCCCCCCCCcceEEEEec-cCccCCCCCCcccCCCCCeeEEEecceeccCCchhhhhhhhcCCCCCcccCCCCCC
Q 008109 353 LGSAQFPANVPQNVDKRFFFTVG-LGTSPCPRNQTCQGPNGTMFEASINNISFVMPTTALLQAHFTGQSNGVYVPDFPTS 431 (577)
Q Consensus 353 l~~~~~~~~~p~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~in~~s~~~p~~~~l~~~~~~~~~g~~~~~~~~~ 431 (577)
.++++.+.+. +.. ++ + . ..-.|+|||+.|...
T Consensus 161 -------------~d~e~~l~~~d~~~-----~~---g-~-~~~~~~iNG~~~~~~------------------------ 193 (288)
T 3gdc_A 161 -------------ADDEMVMVMNGYNT-----DG---G-D-DNEFYSVNGLPFHFM------------------------ 193 (288)
T ss_dssp -------------CSEEEEEEEEEECC-----SS---T-T-CCSEEEETTSTTHHH------------------------
T ss_pred -------------CcceEEEEEeeEec-----CC---C-C-CcceEEECccccccc------------------------
Confidence 1122222111 000 00 0 0 012477888655200
Q ss_pred CCccccCCCCCCCCccccCCceEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCC
Q 008109 432 PLIPFNYTGNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDP 511 (577)
Q Consensus 432 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p 511 (577)
...+.++.|++|+|++.|.+. ..+.||||||||.|+|++.+.. +..|
T Consensus 194 --------------------~~~l~v~~Ge~vr~~l~N~g~-~~~~H~fHlhG~~f~v~~~g~~------------~~~~ 240 (288)
T 3gdc_A 194 --------------------DFPVKVKQHELVRIHLINVLE-YDPINSFHIHGNFFHYYPTGTM------------LTPS 240 (288)
T ss_dssp --------------------HSCEEEETTCCEEEEEEECCC-SSSEEEEEETTCCEEEEETTCC------------SSCS
T ss_pred --------------------CcccccCCCCEEEEEEEeCCC-CCcceeEEEcCCEEEEEcCCCc------------cCCC
Confidence 112477889999999999752 1246999999999999875421 2345
Q ss_pred CeeeeEEeCCCcEEEEEEEecCceeEEEeeechhhhhcccEEEEEEec
Q 008109 512 IERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVLD 559 (577)
Q Consensus 512 ~~rDTv~vp~~~~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~ 559 (577)
.++||+.|+||+++.|+|++++||.|+||||+++|++.|||..|+|.+
T Consensus 241 ~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 241 EYTDTISQVQGQRGILELRFPYPGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp EEESEEEEETTCEEEEEECCCSCEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred ceeeEEEeCCCceEEEEEECCCCEEEEEEecChHHHhcCCCEEEEEeC
Confidence 899999999999999999999999999999999999999999999863
No 40
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.95 E-value=4.5e-28 Score=248.26 Aligned_cols=219 Identities=16% Similarity=0.179 Sum_probs=153.1
Q ss_pred ceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEeCCcccCceEEeEEEECCCceEEEEEEeCCCC---------
Q 008109 211 DTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTNVLLETKPHY--------- 281 (577)
Q Consensus 211 ~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pgeR~dv~v~~~~~~--------- 281 (577)
+.|+|++++|+++|+||+|.....+ .+|.||..+. .+.||.++ +...|.|||+++..++++++.
T Consensus 75 pGP~I~v~~Gd~v~v~~~N~l~~~~-sih~HG~~~~-~~~DG~~~-----t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~ 147 (343)
T 3cg8_A 75 PGPLIEVNEGDTLHIEFTNTMDVRA-SLHVHGLDYE-ISSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRP 147 (343)
T ss_dssp SCCCEEEETTCEEEEEEEECSSSCB-CCEESSSBCC-GGGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEEC
T ss_pred cCCEEEEECCCEEEEEEEECCCCCe-eEEecCcccC-CcCCCccc-----ccccccCCCEEEEEEEeCCCCcccccccCC
Confidence 4589999999999999999996554 5899998877 68999964 244689999999999987641
Q ss_pred -CCceEEEEeeecccCCC-CCCCCceEEEEEEecCCCccccCCCCCCCCCcCCCCCCCCCccccccccccccccCCCCCC
Q 008109 282 -PSATFFMTARPYVTGLG-TFDNSTVAGILEYEKPLNFIHSGNSIKKLPLFKPILPPLNDTNFVTNFVNKLRSLGSAQFP 359 (577)
Q Consensus 282 -~~g~y~l~~~~~~~~~~-~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~ 359 (577)
..|.||.+++....... ........+.+....... + .
T Consensus 148 ~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~---------------~-~------------------------- 186 (343)
T 3cg8_A 148 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD---------------V-L------------------------- 186 (343)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC---------------C-C-------------------------
T ss_pred CCceEEEEecCccccccchhhhhcCCeEEEEEecCCC---------------C-C-------------------------
Confidence 12788888874211000 000011122222221110 0 0
Q ss_pred CCCCCCCcceEEEEeccCccCCCCCCcccCCCCCeeEEEecceeccCCchhhhhhhhcCCCCCcccCCCCCCCCccccCC
Q 008109 360 ANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEASINNISFVMPTTALLQAHFTGQSNGVYVPDFPTSPLIPFNYT 439 (577)
Q Consensus 360 ~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~s~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~ 439 (577)
.|+++.+.++ .|.|||+.|.
T Consensus 187 ------pd~e~~l~~~--------------------d~~iNG~~~~---------------------------------- 206 (343)
T 3cg8_A 187 ------PDATHTIVFN--------------------DMTINNRKPH---------------------------------- 206 (343)
T ss_dssp ------CSEEEEEEEE--------------------TTEETTCCTT----------------------------------
T ss_pred ------CCceEEEEcc--------------------cceecccCCC----------------------------------
Confidence 1233333221 1567875430
Q ss_pred CCCCCCccccCCceEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEe
Q 008109 440 GNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGV 519 (577)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v 519 (577)
..+.+.++.|++|+|+|.|.+ .+.||||||||.|+|+.. |.+.. ....+.+|||+.|
T Consensus 207 -----------~~~~l~v~~Ge~vri~l~N~g---~~~HpfHlHGh~f~v~~~--G~~~~-------p~~~~~~~Dtv~v 263 (343)
T 3cg8_A 207 -----------TGPDFEATVGDRVEIVMITHG---EYYHTFHMHGHRWADNRT--GILTG-------PDDPSRVIDNKIT 263 (343)
T ss_dssp -----------CCCCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSSS--SSCCS-------TTCCCCEESEEEE
T ss_pred -----------CCccEEeCCCCEEEEEEEcCC---ccccccEecCcEEEEecc--CcccC-------CCCcccceeeEEe
Confidence 123468899999999999975 379999999999999743 32221 1123578999999
Q ss_pred CCCcEEEEEEEe---cCceeEEEeeechhhhhcccEEEEEEecC
Q 008109 520 PSGGWVAIRFLA---DNPGVWFMHCHLEVHTSWGLKTAWLVLDG 560 (577)
Q Consensus 520 p~~~~v~irf~a---dnpG~w~~HCHil~H~d~GM~~~~~V~~~ 560 (577)
+||+++.|+|++ ||||.|+||||+++|++.|||..|.|.+.
T Consensus 264 ~PG~~~~v~~~~~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~ 307 (343)
T 3cg8_A 264 GPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKP 307 (343)
T ss_dssp CTTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECT
T ss_pred CCCCEEEEEEEECCCCCCeeEEEeCCCHHHHhccCcEEEEEecC
Confidence 999999999995 89999999999999999999999999864
No 41
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.95 E-value=4.3e-27 Score=241.25 Aligned_cols=246 Identities=19% Similarity=0.177 Sum_probs=158.5
Q ss_pred CeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEe---CCcccCceEEeEEEECCCc
Q 008109 193 DAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEV---DAVYVKPFETETLVITPGQ 269 (577)
Q Consensus 193 ~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~---DG~~v~P~~~d~l~l~pge 269 (577)
..+++||+. +.|+|++++|+++|+|++|..... ..+|.|| +.+... ||.+. ++...|.|||
T Consensus 24 ~~~~~NG~~---------pGP~I~v~~Gd~v~v~v~N~l~~~-~siH~HG--~~~~~~~~~DGvp~----vtq~~I~PG~ 87 (339)
T 2zwn_A 24 KVFGFNGQV---------PGPLIHVQEGDDVIVNVTNNTSLP-HTIHWHG--VHQKGTWRSDGVPG----VTQQPIEAGD 87 (339)
T ss_dssp EEEEETTBS---------SCCEEEEETTCEEEEEEEEESSSC-BCCEEET--CCCTTCGGGSCCBT----TTBCCBCTTC
T ss_pred EEEEECCcc---------CCCeEEEECCCEEEEEEEECCCCC-ccEEeCC--CCcCCCcccCCCCc----cccCccCCCC
Confidence 678999994 458999999999999999998543 3455555 556654 99853 2345799999
Q ss_pred eEEEEEEeCCCCCCceEEEEeeecccCCCCCCCCceEEEEEEecCCCccccCCCCCCCCCcCCCCCCCCCcccccccccc
Q 008109 270 TTNVLLETKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSIKKLPLFKPILPPLNDTNFVTNFVNK 349 (577)
Q Consensus 270 R~dv~v~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~ 349 (577)
|+++.++++++ |+||++++...... .......+.+...... . . + ++...+. ++.-.
T Consensus 88 ~~~y~f~~~~~---Gt~wyH~H~~~~~q--~~~~Gl~G~liV~p~~---------~--~---~-~~~~~d~----e~~l~ 143 (339)
T 2zwn_A 88 SYTYKFKADRI---GTLWYHCHVNVNEH--VGVRGMWGPLIVDPKQ---------P--L---P-IEKRVTK----DVIMM 143 (339)
T ss_dssp EEEEEEECCSC---EEEEEECCSSHHHH--TTTSCCEEEEEEECSS---------C--C---T-TGGGCSE----EEEEE
T ss_pred eEEEEEECCCC---EEEEEEecCCchhh--hhcCCceEeEEecCCC---------c--c---c-ccccCCc----eEEEE
Confidence 99999999875 99999998532110 1101222333333211 0 0 0 0000000 00000
Q ss_pred ccccCCCCCCCCCCCCCcceEEEEeccCccCCCCCCcccCCCCCeeEEEecceeccCCchhhhhhhhcCCCCCcccCCCC
Q 008109 350 LRSLGSAQFPANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEASINNISFVMPTTALLQAHFTGQSNGVYVPDFP 429 (577)
Q Consensus 350 l~~l~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~s~~~p~~~~l~~~~~~~~~g~~~~~~~ 429 (577)
+....... . ..+ ... +. +....-.|.|||+.|.
T Consensus 144 l~d~~~~~-~-~~~-~~~-------g~-------------~~~~~~~~~ING~~~~------------------------ 176 (339)
T 2zwn_A 144 MSTWESAV-A-DKY-GEG-------GT-------------PMNVADYFSVNAKSFP------------------------ 176 (339)
T ss_dssp EEEECGGG-T-TCT-TCC-------CS-------------TTSCCCEEEETTBCTT------------------------
T ss_pred eeheeccc-c-ccc-CCC-------CC-------------CccccceEEEccccCC------------------------
Confidence 00000000 0 000 000 00 0000113567765431
Q ss_pred CCCCccccCCCCCCCCccccCCceEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCC
Q 008109 430 TSPLIPFNYTGNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLV 509 (577)
Q Consensus 430 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~ 509 (577)
....+.++.|++++|+|.|.+ ...||||||||.|+|++.+.. .+.
T Consensus 177 ---------------------~~~~~~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~DG~-----------~~~ 221 (339)
T 2zwn_A 177 ---------------------LTQPLRVKKGDVVKIRFFGAG---GGIHAMHSHGHDMLVTHKDGL-----------PLD 221 (339)
T ss_dssp ---------------------SSCCEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEETTE-----------EEE
T ss_pred ---------------------CcccEEECCCCEEEEEEEeCC---CceEEEEECCcEEEEEEeCCe-----------ecC
Confidence 122467889999999999975 369999999999999998522 122
Q ss_pred CCCeeeeEEeCCCcEEEEEEEecCceeEEEeeechhh------hhcccEEEEEEecC
Q 008109 510 DPIERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVH------TSWGLKTAWLVLDG 560 (577)
Q Consensus 510 ~p~~rDTv~vp~~~~v~irf~adnpG~w~~HCHil~H------~d~GM~~~~~V~~~ 560 (577)
+|.++||+.|+||+++.|+|++|+||.|++|||+++| ++.||+..|.|...
T Consensus 222 ~p~~~dtv~l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 222 SPYYADTVLVSPGERYDVIIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGV 278 (339)
T ss_dssp EEEEESEEEECTTCEEEEEEECCSCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTS
T ss_pred CCcEEEEEEECCCCEEEEEEEeCCCeeEEEEEechhhcccccccCCCcEEEEEECCC
Confidence 4778999999999999999999999999999999999 88999999998643
No 42
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.95 E-value=4.4e-27 Score=238.58 Aligned_cols=247 Identities=20% Similarity=0.211 Sum_probs=163.1
Q ss_pred CeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEE-EEeCCcccCceEEeEEEECCCceE
Q 008109 193 DAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTV-VEVDAVYVKPFETETLVITPGQTT 271 (577)
Q Consensus 193 ~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~v~P~~~d~l~l~pgeR~ 271 (577)
..+++||+. +.|+|+++.|+++++|+.|.... ...+|+||....- .+.||.+. +....|.||+++
T Consensus 23 ~~~~~ng~~---------pGP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~ 88 (318)
T 3g5w_A 23 HTFAFNGQV---------PAPLIHVMEGDDVTVNVTNMTTL-PHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTF 88 (318)
T ss_dssp EEEEETTBS---------SCCEEEEETTCEEEEEEEECSSS-CBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEE
T ss_pred EEEEECCcc---------CCceEEEeCCCEEEEEEEeCCCC-ceeEEecCcCCCCCcccCCCcc----cccccCCCCCEE
Confidence 578999985 45899999999999999999854 4579999986542 36899853 223578999999
Q ss_pred EEEEEeCCCCCCceEEEEeeecccCCCCCCCCceEEEEEEecCCCccccCCCCCCCCCcCCCCCCCCCcccccccccccc
Q 008109 272 NVLLETKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSIKKLPLFKPILPPLNDTNFVTNFVNKLR 351 (577)
Q Consensus 272 dv~v~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~ 351 (577)
+..++++++ |+||.+++......... ....+.|.++.... ... +..
T Consensus 89 ~y~f~~~~~---Gt~wYH~H~~~~~~~~~--~Gl~G~lIV~~~~~-----------~~~----~~~-------------- 134 (318)
T 3g5w_A 89 TYKFKAEPA---GTMWYHCHVNVNEHVTM--RGMWGPLIVEPKNP-----------LPI----EKT-------------- 134 (318)
T ss_dssp EEEEECCSC---EEEEEECCSSHHHHHHH--SCCEEEEEEECSSC-----------CHH----HHT--------------
T ss_pred EEEEEcCCC---EEEEEEccCChhhhhcc--CCCEEEEEEcCCCc-----------ccc----ccc--------------
Confidence 999999876 99999998621110000 12233344442210 000 000
Q ss_pred ccCCCCCCCCCCCCCcceEEEEec-cCccCCCCCCcccCCCCCeeEEEecceeccCCchhhhhhhhcCCCCCcccCCCCC
Q 008109 352 SLGSAQFPANVPQNVDKRFFFTVG-LGTSPCPRNQTCQGPNGTMFEASINNISFVMPTTALLQAHFTGQSNGVYVPDFPT 430 (577)
Q Consensus 352 ~l~~~~~~~~~p~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~in~~s~~~p~~~~l~~~~~~~~~g~~~~~~~~ 430 (577)
.++.+.+.++ ..............+....-.|.|||+.|.
T Consensus 135 --------------~d~e~~l~l~dw~~~~~~~~~~~~~~~~~~d~~~ING~~~~------------------------- 175 (318)
T 3g5w_A 135 --------------VTKDYILMLSDWVSSWANKPGEGGIPGDVFDYYTINAKSFP------------------------- 175 (318)
T ss_dssp --------------CCEEEEEEEEEECGGGTTCTTCCCCTTCCCCEEEETTBCBT-------------------------
T ss_pred --------------ccceeEEEEEeeccccccccccCCCCCCcCcEEEEcCcCCC-------------------------
Confidence 0111111000 000000000000000000113678876541
Q ss_pred CCCccccCCCCCCCCccccCCceEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCC
Q 008109 431 SPLIPFNYTGNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVD 510 (577)
Q Consensus 431 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~ 510 (577)
.+..+.++.|++++|+|.|.+ ...||||||||.|+|+++..+ .+.+
T Consensus 176 --------------------~~~~l~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~dG~-----------~~~~ 221 (318)
T 3g5w_A 176 --------------------ETQPIRVKKGDVIRLRLIGAG---DHVHAIHTHGHISQIAFKDGF-----------PLDK 221 (318)
T ss_dssp --------------------SSCCEEECTTCEEEEEEEECS---SSCEEEEETTSCEEEEEETTE-----------EEEE
T ss_pred --------------------CCccEEeCCCCEEEEEEEeCC---CceEEEEECCcEEEEEecCCc-----------ccCC
Confidence 112357889999999999975 368999999999999998532 1235
Q ss_pred CCeeeeEEeCCCcEEEEEEEecCceeEEEeeechhhhh------cccEEEEEEecC
Q 008109 511 PIERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTS------WGLKTAWLVLDG 560 (577)
Q Consensus 511 p~~rDTv~vp~~~~v~irf~adnpG~w~~HCHil~H~d------~GM~~~~~V~~~ 560 (577)
|.+|||+.|+||+++.|+|++||||.|+||||+++|++ .|||..|.|...
T Consensus 222 p~~~dtv~l~pger~~v~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~ 277 (318)
T 3g5w_A 222 PIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEV 277 (318)
T ss_dssp EEEESEEEECTTCEEEEEEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTT
T ss_pred CccccEEEECCCCEEEEEEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCC
Confidence 77999999999999999999999999999999999998 689999998653
No 43
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.94 E-value=1e-26 Score=233.80 Aligned_cols=220 Identities=20% Similarity=0.234 Sum_probs=149.8
Q ss_pred ceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEeCCcccCceEEeEEEECCCceEEEEEEeCCC----------
Q 008109 211 DTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTNVLLETKPH---------- 280 (577)
Q Consensus 211 ~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pgeR~dv~v~~~~~---------- 280 (577)
+.|+|++++|+++++++.|..... .++|.+|..+. -+.||.++. .-.|.|||.+...++++.+
T Consensus 56 PGP~i~~~~GD~v~v~~~N~l~~~-~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~ 128 (299)
T 3t9w_A 56 PGPVLEMWEGDTLEIDLVNTTDRV-LSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWAE 128 (299)
T ss_dssp SCCCEEEETTCEEEEEEEECSSSC-BCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEEC
T ss_pred cCceEEEECCeEEEEEEEECCCCC-ccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCCC
Confidence 568999999999999999998544 47899998655 357998652 1247899999998887632
Q ss_pred CCCceEEEEeeecccCCCC-CCCCceEEEEEEecCCCccccCCCCCCCCCcCCCCCCCCCccccccccccccccCCCCCC
Q 008109 281 YPSATFFMTARPYVTGLGT-FDNSTVAGILEYEKPLNFIHSGNSIKKLPLFKPILPPLNDTNFVTNFVNKLRSLGSAQFP 359 (577)
Q Consensus 281 ~~~g~y~l~~~~~~~~~~~-~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~ 359 (577)
...|+||.+++........ .-.....+.|....... +
T Consensus 129 ~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~---------------~--------------------------- 166 (299)
T 3t9w_A 129 GTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD---------------L--------------------------- 166 (299)
T ss_dssp CCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC---------------C---------------------------
T ss_pred CCceeEEEecCCcccccchhhhcccccceEEEecccc---------------c---------------------------
Confidence 1239999998753211100 00012233333321110 0
Q ss_pred CCCCCCCcceEEEEeccCccCCCCCCcccCCCCCeeEEEecceeccCCchhhhhhhhcCCCCCcccCCCCCCCCccccCC
Q 008109 360 ANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEASINNISFVMPTTALLQAHFTGQSNGVYVPDFPTSPLIPFNYT 439 (577)
Q Consensus 360 ~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~s~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~ 439 (577)
..|+++.+.++ .|.+|+..+ +
T Consensus 167 -----~~d~e~~l~~~--------------------~~~~Ng~~~------------------------~---------- 187 (299)
T 3t9w_A 167 -----LPKRQFTVVFN--------------------DMMINNRAH------------------------H---------- 187 (299)
T ss_dssp -----CCSEEEEEEEE--------------------TTEETTCCT------------------------T----------
T ss_pred -----Cccccceeeee--------------------eeeecCccc------------------------c----------
Confidence 11344444332 145665432 0
Q ss_pred CCCCCCccccCCceEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEe
Q 008109 440 GNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGV 519 (577)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v 519 (577)
....+.++.|++|+|++.|.+ ...||||||||.|+|+..+... .....+.++||+.|
T Consensus 188 -----------~~p~l~v~~Ge~Vr~~liN~~---~~~HpfHlHGh~F~v~~~g~~~---------~~~~~~~~~Dtv~v 244 (299)
T 3t9w_A 188 -----------DAPTFEANLGERVEWIAIGHG---SNFHTFHLHGHRWLDNRTGMRT---------SEYDPSPLIDIKDL 244 (299)
T ss_dssp -----------CCCEEEEETTCEEEEEEEEES---SCCCEEEETTCCEESSSSSSCC---------STTCCCCEESEEEC
T ss_pred -----------ccccceecCCCEEEEEEEecc---ccceeeeEecceEEEEeccccc---------CCcCCCCceeeEEe
Confidence 123467889999999999975 4789999999999998775322 22334568999999
Q ss_pred CCCcEEE---EEEEecCceeEEEeeechhhhhcccEEEEEEecCC
Q 008109 520 PSGGWVA---IRFLADNPGVWFMHCHLEVHTSWGLKTAWLVLDGK 561 (577)
Q Consensus 520 p~~~~v~---irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 561 (577)
.||+... |+|++||||.|+|||||++|++.|||++|+|++.+
T Consensus 245 ~PGe~~~~~via~~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~ 289 (299)
T 3t9w_A 245 NPGVSFGFQVIAGEGVGPGMWMYHCHVQNHSDMGMAGMFLVRNAD 289 (299)
T ss_dssp CTTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred CCceeEEEEEEEeeCCCCeeEEEEcCCHHHHhcCCeEEEEEECCC
Confidence 9997654 45567899999999999999999999999998653
No 44
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.94 E-value=1.4e-26 Score=230.63 Aligned_cols=220 Identities=15% Similarity=0.159 Sum_probs=155.5
Q ss_pred ceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEeCCcccCceEEeEEEECCCceEEEEEEeCCC----------
Q 008109 211 DTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTNVLLETKPH---------- 280 (577)
Q Consensus 211 ~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pgeR~dv~v~~~~~---------- 280 (577)
+.|+|+++.|+++++++.|... ...++|.+|..+.. +.||.++ ..-.|.||+++...++++++
T Consensus 34 pGP~i~~~~Gd~v~v~~~N~~~-~~~siH~HG~~~~~-~~DG~~~-----t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~ 106 (276)
T 3kw8_A 34 PGPLIEVNEGDTLHIEFTNTMD-VRASLHVHGLDYEI-SSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRP 106 (276)
T ss_dssp SCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCCG-GGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECCC-CCccEeecCcccCC-ccCCCcC-----CcCCCCCCCEEEEEEEcCCccccccCccCC
Confidence 5689999999999999999974 45579999987654 5899862 33568999999999999762
Q ss_pred CCCceEEEEeeecccCC-CCCCCCceEEEEEEecCCCccccCCCCCCCCCcCCCCCCCCCccccccccccccccCCCCCC
Q 008109 281 YPSATFFMTARPYVTGL-GTFDNSTVAGILEYEKPLNFIHSGNSIKKLPLFKPILPPLNDTNFVTNFVNKLRSLGSAQFP 359 (577)
Q Consensus 281 ~~~g~y~l~~~~~~~~~-~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~ 359 (577)
...|.||.+++...... .........+.|....... +
T Consensus 107 ~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~---------------~--------------------------- 144 (276)
T 3kw8_A 107 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD---------------V--------------------------- 144 (276)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC---------------C---------------------------
T ss_pred CCCEEEEEecCccccccchhhhhCccEEEEEEecCCC---------------c---------------------------
Confidence 11289999988532100 0000112233333332110 0
Q ss_pred CCCCCCCcceEEEEeccCccCCCCCCcccCCCCCeeEEEecceeccCCchhhhhhhhcCCCCCcccCCCCCCCCccccCC
Q 008109 360 ANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEASINNISFVMPTTALLQAHFTGQSNGVYVPDFPTSPLIPFNYT 439 (577)
Q Consensus 360 ~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~s~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~ 439 (577)
..|+++.+.++ .|+|||+.|.
T Consensus 145 -----~~drE~~l~l~--------------------~~~iNG~~~~---------------------------------- 165 (276)
T 3kw8_A 145 -----LPDATHTIVFN--------------------DMTINNRKPH---------------------------------- 165 (276)
T ss_dssp -----CCSEEEEEEEE--------------------TTEETTCCTT----------------------------------
T ss_pred -----ccccceEEEec--------------------ccccceeccc----------------------------------
Confidence 01344433221 1578876541
Q ss_pred CCCCCCccccCCceEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEe
Q 008109 440 GNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGV 519 (577)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v 519 (577)
..+.+.++.|++|+|+|.|.+ .+.||||||||.|+|++. |.++.. ...+.+|||+.|
T Consensus 166 -----------~~p~i~v~~G~~vri~l~N~~---~~~Hp~HlHG~~f~v~~~--G~~~~p-------~~~~~~~Dtv~v 222 (276)
T 3kw8_A 166 -----------TGPDFEATVGDRVEIVMITHG---EYYHTFHMHGHRWADNRT--GILTGP-------DDPSRVIDNKIT 222 (276)
T ss_dssp -----------CCCCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSSS--SSCCST-------TCCCCEESEEEE
T ss_pred -----------CCCCEEEecCCEEEEEEecCC---CcceeEEEccceeEEecc--CccCCC-------cccccCCccEEe
Confidence 123468899999999999975 379999999999999764 322211 123469999999
Q ss_pred CCCcEEEEEEEec---CceeEEEeeechhhhhcccEEEEEEecCC
Q 008109 520 PSGGWVAIRFLAD---NPGVWFMHCHLEVHTSWGLKTAWLVLDGK 561 (577)
Q Consensus 520 p~~~~v~irf~ad---npG~w~~HCHil~H~d~GM~~~~~V~~~~ 561 (577)
.||+++.++|+++ |||.|+||||+++|++.|||+.|.|.+..
T Consensus 223 ~pg~~~~~~~~~~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~ 267 (276)
T 3kw8_A 223 GPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD 267 (276)
T ss_dssp CTTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred CCCceEEEEEEeccCCCCCeEEEECCCchHhhCCCeEEEEEeCCC
Confidence 9999999999997 89999999999999999999999998764
No 45
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.94 E-value=1.6e-25 Score=226.96 Aligned_cols=220 Identities=16% Similarity=0.163 Sum_probs=150.3
Q ss_pred ceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEeCCcccCceEEeEEEECCCceEEEEEEeCCC----------
Q 008109 211 DTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTNVLLETKPH---------- 280 (577)
Q Consensus 211 ~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pgeR~dv~v~~~~~---------- 280 (577)
+.|+|+++.|++++++|.|..... .++|.||..+.- +.||.+.. .-.|.||+++...+++..+
T Consensus 40 PGP~i~~~~Gd~v~v~~~N~l~~~-~siH~HG~~~~~-~~dG~~~~-----~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~ 112 (313)
T 3tas_A 40 PGPLIELNEGDTLHIEFENTMDVP-VSLHVHGLDYEI-SSDGTKQS-----RSDVEPGGTRTYTWRTHVPGRRADGTWRA 112 (313)
T ss_dssp SCCCEEEETTCEEEEEEEECSSSC-BCCEESSSBCCG-GGSCSTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECCCCC-ccEeecCCcCCc-cCCCCccc-----cCCcCCCCEEEEEEEeccCCccccccccC
Confidence 568999999999999999998544 468999876543 57897641 1237899999988877532
Q ss_pred CCCceEEEEeeecccCCCCC-CCCceEEEEEEecCCCccccCCCCCCCCCcCCCCCCCCCccccccccccccccCCCCCC
Q 008109 281 YPSATFFMTARPYVTGLGTF-DNSTVAGILEYEKPLNFIHSGNSIKKLPLFKPILPPLNDTNFVTNFVNKLRSLGSAQFP 359 (577)
Q Consensus 281 ~~~g~y~l~~~~~~~~~~~~-~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~ 359 (577)
...|+||.+++......... -.....+.|....... +
T Consensus 113 ~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~---------------~--------------------------- 150 (313)
T 3tas_A 113 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD---------------V--------------------------- 150 (313)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC---------------B---------------------------
T ss_pred CCceEEEEeecCcccccchhhhhccccCceEeecccc---------------c---------------------------
Confidence 12389999987522110000 0012233333331110 0
Q ss_pred CCCCCCCcceEEEEeccCccCCCCCCcccCCCCCeeEEEecceeccCCchhhhhhhhcCCCCCcccCCCCCCCCccccCC
Q 008109 360 ANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEASINNISFVMPTTALLQAHFTGQSNGVYVPDFPTSPLIPFNYT 439 (577)
Q Consensus 360 ~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~s~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~ 439 (577)
..|+++.+.++ .|++|+..+.
T Consensus 151 -----~~d~e~~l~~~--------------------d~t~Ng~~~~---------------------------------- 171 (313)
T 3tas_A 151 -----LPDRTHTIVFN--------------------DMTINNRPAH---------------------------------- 171 (313)
T ss_dssp -----CCSEEEEEEEE--------------------TTEETTCCTT----------------------------------
T ss_pred -----cccccceeecc--------------------chhcccCCcc----------------------------------
Confidence 11344433321 1556653320
Q ss_pred CCCCCCccccCCceEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEe
Q 008109 440 GNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGV 519 (577)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v 519 (577)
..+.+.++.|++|+|++.|.+ .+.||||||||.|+|+..+... .....+.++||+.|
T Consensus 172 -----------~~~~l~v~~Ge~vr~~liN~g---~~~hpfHlHGh~F~v~~~~~~~---------~~~~~~~~~Dtv~l 228 (313)
T 3tas_A 172 -----------TGPDFEATVGDRVEFVMITHG---EYYHTFHLHGHRWADNRTGMLT---------GPDDPSQVIDNKIC 228 (313)
T ss_dssp -----------CCCCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSTTSSCC---------STTCCCCEESEEEE
T ss_pred -----------cccccccccCCEEEEEEeccc---ccceeeeecCCeeEEEEECCcc---------CCCCCCeeeeEEEe
Confidence 122357788999999999975 4789999999999998765221 12235789999999
Q ss_pred CCCcEEEEEEEe---cCceeEEEeeechhhhhcccEEEEEEecCC
Q 008109 520 PSGGWVAIRFLA---DNPGVWFMHCHLEVHTSWGLKTAWLVLDGK 561 (577)
Q Consensus 520 p~~~~v~irf~a---dnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 561 (577)
.|++...+++.+ +|||.|+|||||++|++.|||+.|+|++..
T Consensus 229 ~Pger~~v~v~a~~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d 273 (313)
T 3tas_A 229 GPADSFGFQVIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD 273 (313)
T ss_dssp CTTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred CCCcceEEEEEeccCCCCEeEEEEeCChHHHHCCCeEEEEEECCC
Confidence 999988877765 699999999999999999999999998654
No 46
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.87 E-value=8.5e-24 Score=213.65 Aligned_cols=239 Identities=13% Similarity=0.073 Sum_probs=134.4
Q ss_pred EEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEeCCcccC----ceEEeEEEECCCce
Q 008109 195 YTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVK----PFETETLVITPGQT 270 (577)
Q Consensus 195 ~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~----P~~~d~l~l~pgeR 270 (577)
.++||.++ |+|++++|+++|+|+.|... ..+++|.||..+.. +.||.+.. +...+...|.||||
T Consensus 52 ~~~n~~pG----------P~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~~-~~dG~~~~dg~~~~~~~~~~I~PG~~ 119 (306)
T 1sdd_A 52 SRTSGLLG----------PTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYSK-FSEGASYSDHTLPMEKMDDAVAPGQE 119 (306)
T ss_dssp CSSCCSCC----------CCEEEETTCEEEEEEEECSS-SCBCCEEESSCCCT-TTSCCCSCCCCCHHHHTTTCBCTTCE
T ss_pred cccCCccC----------CEEEEeCCCEEEEEEEECCC-CcccEeecceeccc-ccCCCccCCCCcccccCCCccCCCCe
Confidence 45787654 78999999999999999874 55578888877432 58898652 22333578999999
Q ss_pred EEEEEEeCCCC-------CCceEEEEeeecccCCCCCCCCceEEEEEEecCCCccccCCCCCCCCCcCCCCCCCCCcccc
Q 008109 271 TNVLLETKPHY-------PSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSIKKLPLFKPILPPLNDTNFV 343 (577)
Q Consensus 271 ~dv~v~~~~~~-------~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~ 343 (577)
++..+++++.. ..|+||++++...... ......+ ++|....... ... +..... +..
T Consensus 120 ~~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~~~~q-~~~GL~G-~liV~~~~~~--------~~~----~~~~~~-d~e-- 182 (306)
T 1sdd_A 120 YTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVED-FNSGLIG-PLLICKKGTL--------TED----GTQKMF-EKQ-- 182 (306)
T ss_dssp EEEEEECCGGGSCCSSSCSEEEEEEECCSSSHHH-HHTTCCE-EEEEECTTCB--------CTT----SSBSSS-CCC--
T ss_pred EEEEEEeCCccCCCCCCCCceEEEEeccCCchhh-hccCceE-EEEEccCCCC--------Ccc----CCcCcc-cce--
Confidence 99999997752 1279999998422100 0111222 3444422110 000 000000 000
Q ss_pred ccccccccccCCCCCCCCCCCCCcceEEEEeccCccCCCCCCcccCCCCCeeEEEecceeccCCchhhhhhhhcCCCCCc
Q 008109 344 TNFVNKLRSLGSAQFPANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEASINNISFVMPTTALLQAHFTGQSNGV 423 (577)
Q Consensus 344 ~~~~~~l~~l~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~s~~~p~~~~l~~~~~~~~~g~ 423 (577)
+..-+..+ ..... ... . ..-.+.|||..|..
T Consensus 183 --~~l~~~d~-------------------d~~~~---------~~~-~-~~~~~~ING~~~~~----------------- 213 (306)
T 1sdd_A 183 --HVLMFAVF-------------------DESKS---------WNQ-T-SSLMYTVNGYVNGT----------------- 213 (306)
T ss_dssp --CCCBCCEE-------------------ETTSS---------SSC-C-CCEEECSSSCCSSC-----------------
T ss_pred --EEEEEEec-------------------ccccc---------ccc-C-CCcceeeCCEecCC-----------------
Confidence 00000000 00000 000 0 01135677654310
Q ss_pred ccCCCCCCCCccccCCCCCCCCccccCCceEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCC
Q 008109 424 YVPDFPTSPLIPFNYTGNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDP 503 (577)
Q Consensus 424 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~ 503 (577)
.+.+.++.|++++|+|.|.+. ....||||+|||.|++ .|
T Consensus 214 ----------------------------~p~l~v~~G~~vrlrliN~g~-~~~~h~~hlhG~~~~~----dG-------- 252 (306)
T 1sdd_A 214 ----------------------------MPDITVCAHDHISWHLIGMSS-GPELFSIHFNGQVLEQ----NH-------- 252 (306)
T ss_dssp ----------------------------CCCCCCCCC------BBCCCS-SSCEECCBCSSTTCEE----TT--------
T ss_pred ----------------------------CcceEEcCCCEEEEEEEeCCC-CCccEEEEECCcEeee----CC--------
Confidence 112355679999999999753 2257999999999986 11
Q ss_pred CCCCCCCCCeeeeEEeCCCcEEEEEEEecCceeEEEeeechhhhhcccEEEEEEecC
Q 008109 504 AKFNLVDPIERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVLDG 560 (577)
Q Consensus 504 ~~~~~~~p~~rDTv~vp~~~~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~ 560 (577)
.++||+.|.||+.+.|+|++++||.|+||||+++|++.|||+.|.|++.
T Consensus 253 --------~~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 253 --------HKISAITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp --------EECSCCCEETTCCBC--------CCCCCBCCSTTTGGGTCBCCC-----
T ss_pred --------EEcceEEECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeEEEEEecC
Confidence 3699999999999999999999999999999999999999999999754
No 47
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.86 E-value=3.4e-21 Score=214.38 Aligned_cols=250 Identities=13% Similarity=0.133 Sum_probs=143.2
Q ss_pred ceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEeCCcccC---c-eEEeEEEECCCceEEEEEEeCCCC---CC
Q 008109 211 DTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVK---P-FETETLVITPGQTTNVLLETKPHY---PS 283 (577)
Q Consensus 211 ~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~---P-~~~d~l~l~pgeR~dv~v~~~~~~---~~ 283 (577)
+.|+|++++|+++++||.|.... ...+|.||.... .+.||.+.. | ..+....|.||++++..+++++.. +.
T Consensus 67 pGP~I~~~~Gd~v~v~~~N~l~~-~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~ 144 (647)
T 1sdd_B 67 LGPVIRAEVDDVIQVRFKNLASR-PYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENP 144 (647)
T ss_dssp SCCCEEEETTCEEEEEECCCSSS-CBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSS
T ss_pred cCceEEEeCCCEEEEEEEECCCC-ceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCC
Confidence 45899999999999999999854 456888887764 478998642 2 223467899999999999998742 12
Q ss_pred c----eEEEEeeecccCCCCCCCCceEEEEEEecCCCccccCCCCCCCCCcCCCCCCCCCccccccccccccccCCCCCC
Q 008109 284 A----TFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSIKKLPLFKPILPPLNDTNFVTNFVNKLRSLGSAQFP 359 (577)
Q Consensus 284 g----~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~ 359 (577)
| +||.+++...... ....+.+ ++|....... . .. +..+. .+..... +...+.......+.
T Consensus 145 G~~c~T~wYHsH~~~~~q-~~~GL~G-~lIV~~~~~~--------~--~~--~~~~~-~~~e~~l-~l~~~d~~~~w~~~ 208 (647)
T 1sdd_B 145 GSACRAWAYYSAVNPEKD-IHSGLIG-PLLICRKGTL--------D--KE--TNMPV-DMREFVL-LFMVFDEKKSWYYD 208 (647)
T ss_dssp SCSEEEEEEECCSSHHHH-HTTTCEE-EEEEECTTSS--------C--TT--SCCCS-SCCEEEE-EEEEEEGGGSSCCC
T ss_pred CCCceEEEEccCCCCccc-ccccCcc-CEEEeeCCCc--------c--cc--cCCCC-cceeEEE-EEEeecCccccccc
Confidence 7 9999998632110 0111222 3333321110 0 00 00111 0100000 00000000000000
Q ss_pred CCCCCCCcceEEEEeccCccCCCCCCcccCCCCCeeEEEecceeccCCchhhhhhhhcCCCCCcccCCCCCCCCccccCC
Q 008109 360 ANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEASINNISFVMPTTALLQAHFTGQSNGVYVPDFPTSPLIPFNYT 439 (577)
Q Consensus 360 ~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~s~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~ 439 (577)
. ..+..+.. ... ......-.+.|||..|.
T Consensus 209 ~------~~~~~~~~-~~~----------~~~~~~~~~~iNG~~~~---------------------------------- 237 (647)
T 1sdd_B 209 K------KPTRSWRR-ASS----------EVKNSHEFHAINGMIYN---------------------------------- 237 (647)
T ss_dssp --------------------------------CCCEEEEETTBSSC----------------------------------
T ss_pred c------Cccccccc-CCc----------chhhcCceeccCCEecC----------------------------------
Confidence 0 00000000 000 00000123456654330
Q ss_pred CCCCCCccccCCceEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEe
Q 008109 440 GNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGV 519 (577)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v 519 (577)
.+.+.++.|++++|+|.|.+. ..+.||||+|||.|+|++. ++.++||+.|
T Consensus 238 ------------~p~l~v~~G~~vrlrliN~~~-~~~~h~~hlhG~~f~vi~~-----------------d~~~~d~v~l 287 (647)
T 1sdd_B 238 ------------LPGLRMYEQEWVRLHLLNLGG-SRDIHVVHFHGQTLLENGT-----------------QQHQLGVWPL 287 (647)
T ss_dssp ------------CCCCEEETTCEEEEEEEECCC-TTCCEEEEETTCCEEECSS-----------------SCEEESSEEE
T ss_pred ------------CCCeEEcCCCEEEEEEEeCCC-CCcceeEEEcCcEEEEecC-----------------CCcccceEEE
Confidence 123467889999999999752 2358999999999999864 2458999999
Q ss_pred CCCcEEEEEEEecCceeEEEeeechhhhhcccEEEEEEec
Q 008109 520 PSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVLD 559 (577)
Q Consensus 520 p~~~~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~ 559 (577)
.||+.+.|+|++++||.|+||||+++|++.|||..|.|.+
T Consensus 288 ~pg~r~~v~~~~~~pG~w~~hch~~~h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 288 LPGSFKTLEMKASKPGWWLLDTEVGEIQRAGMQTPFLIVD 327 (647)
T ss_dssp CTTEEEEEEEECCSSEEEEEECCCHHHHTTTCEEEEEEEC
T ss_pred CCCeEEEEEEEeccceEeecccCcccccccccccceeeec
Confidence 9999999999999999999999999999999999999964
No 48
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.86 E-value=7.1e-20 Score=188.09 Aligned_cols=94 Identities=17% Similarity=0.205 Sum_probs=77.9
Q ss_pred eEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCC--eeeeEEeCCCcEEEEEEE
Q 008109 453 KLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPI--ERNTVGVPSGGWVAIRFL 530 (577)
Q Consensus 453 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~--~rDTv~vp~~~~v~irf~ 530 (577)
..+.++.|++++|++.|.+ ...|++|+|||.|+|+.. |. +.+++ ++||+.|.+|+.+.|.|+
T Consensus 231 ~~l~v~~G~r~Rl~n~~~~---~~~~~~~i~gh~~~Vi~d--G~-----------~~~~p~~~~dtv~l~pGer~~v~v~ 294 (340)
T 2bw4_A 231 HALTAAVGERVLVVHSQAN---RDTRPHLIGGHGDYVWAT--GK-----------FRNPPDLDQETWLIPGGTAGAAFYT 294 (340)
T ss_dssp GCEEEETTCEEEEEEEESS---SCBCEEEETCCEEEEETT--CC-----------TTSCCEEEESCCCBCTTEEEEEEEE
T ss_pred CceEcCCCCEEEEEECCCC---CccceEEecCcceEEeCC--Cc-----------ccCCccccceEEEeCCCceEEEEEE
Confidence 4568889999998887754 367899999999999863 32 12233 479999999999999999
Q ss_pred ecCceeEEEeeech-hhhhcccEEEEEEecCCC
Q 008109 531 ADNPGVWFMHCHLE-VHTSWGLKTAWLVLDGKL 562 (577)
Q Consensus 531 adnpG~w~~HCHil-~H~d~GM~~~~~V~~~~~ 562 (577)
+++||.|+||||++ +|++.|||++|+|+....
T Consensus 295 ~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 295 FRQPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp CCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred CCCCeeeEEEcCchHHHHhCCCEEEEEECCCCc
Confidence 99999999999999 599999999999986543
No 49
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.85 E-value=3.7e-20 Score=188.72 Aligned_cols=249 Identities=14% Similarity=0.116 Sum_probs=158.9
Q ss_pred CeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCC-CcEEEEEcCceeEEEEeCCcccCceEEeEEEECCCceE
Q 008109 193 DAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALN-DDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTT 271 (577)
Q Consensus 193 ~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pgeR~ 271 (577)
..+++||+. +.|+|++++|+++|||++|.... ..+.+|+||.. +.||... ...|.|||++
T Consensus 59 ~~~~~ng~~---------pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~ 119 (327)
T 1kbv_A 59 RYWTFDGDV---------PGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTS 119 (327)
T ss_dssp EEEEETTBS---------SCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEE
T ss_pred EEEEECCcc---------CCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEE
Confidence 578999984 45899999999999999999853 45678888863 5788743 1248999999
Q ss_pred EEEEEeCCCCCCceEEEEeeecccCCCCCCCCceEEEEEEecCCCccccCCCCCCCCCcCCCCCCCCCcccccccccccc
Q 008109 272 NVLLETKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSIKKLPLFKPILPPLNDTNFVTNFVNKLR 351 (577)
Q Consensus 272 dv~v~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~ 351 (577)
++.++++++ |+||++++.......... ...+.+.+.... . .|...... . --+.
T Consensus 120 ~y~f~~~~~---Gt~wyH~h~~~~~~~~~~--Gl~G~~iV~~~~-------------~----~p~~d~e~-~----l~~~ 172 (327)
T 1kbv_A 120 TFSFKALQP---GLYIYHCAVAPVGMHIAN--GMYGLILVEPKE-------------G----LPKVDKEF-Y----IVQG 172 (327)
T ss_dssp EEEEECCSC---EEEEEECCCSSHHHHHHT--TCEEEEEEECTT-------------C----CCCCSEEE-E----EEEE
T ss_pred EEEEECCCC---eEEEEEeCCCChhhhhhc--ceEEEEEEecCC-------------C----CCCCceEE-E----EEee
Confidence 999999886 999999985321000001 222333333211 0 11111000 0 0001
Q ss_pred ccCCCCCCCCCCCCCcceEEEEeccCccCCCCCCcccCCCCCeeEEEecceeccCCchhhhhhhhcCCCCCcccCCCCCC
Q 008109 352 SLGSAQFPANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEASINNISFVMPTTALLQAHFTGQSNGVYVPDFPTS 431 (577)
Q Consensus 352 ~l~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~s~~~p~~~~l~~~~~~~~~g~~~~~~~~~ 431 (577)
...... .. ...... ...+... .+..+ -.+.+||+.|..
T Consensus 173 d~~~~~----~~-~~~g~~--~~~~~~~--------~~~~~--~~~~iNG~~~~~------------------------- 210 (327)
T 1kbv_A 173 DFYTKG----KK-GAQGLQ--PFDMDKA--------VAEQP--EYVVFNGHVGAL------------------------- 210 (327)
T ss_dssp EECBSS----CT-TCCEEE--CBCHHHH--------HHTCC--SEEEETTSTTTT-------------------------
T ss_pred eeeccC----cc-cccccc--ccChhHh--------ccCCC--ceEEEcCcccCC-------------------------
Confidence 100000 00 000000 0000000 00011 124566543310
Q ss_pred CCccccCCCCCCCCccccCCceEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCC
Q 008109 432 PLIPFNYTGNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDP 511 (577)
Q Consensus 432 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p 511 (577)
. ....+.++.|++++|+|.|.+. ...|+||||||.|+|++...+. ..|
T Consensus 211 -----------------~-~~~~l~v~~G~~vRlRliN~~~--~~~~~~~l~Gh~f~vi~~DG~~------------~~p 258 (327)
T 1kbv_A 211 -----------------T-GDNALKAKAGETVRMYVGNGGP--NLVSSFHVIGEIFDKVYVEGGK------------LIN 258 (327)
T ss_dssp -----------------S-GGGCEEEETTEEEEEEEEEEES--SCCEEEEEETCCBSEEEGGGSS------------CEE
T ss_pred -----------------C-CceeEEeCCCCEEEEEEECCCC--CCceeEEEeCCEEEEEEcCCCc------------CCC
Confidence 0 0134688899999999999752 3689999999999999986431 236
Q ss_pred CeeeeEEeCCCcEEEEEEEecCceeEEEeeechhhh-hcccEEEEEEecCC
Q 008109 512 IERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHT-SWGLKTAWLVLDGK 561 (577)
Q Consensus 512 ~~rDTv~vp~~~~v~irf~adnpG~w~~HCHil~H~-d~GM~~~~~V~~~~ 561 (577)
.++|++.|.+|+.+.|.|++++||.|++|||+.+|. ..||++.|.|+...
T Consensus 259 ~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 259 ENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp CSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred CceeEEEECCCCEEEEEEEeCCCeEEEEEeccccccccCCcEEEEEECCCC
Confidence 789999999999999999999999999999999995 88999999997654
No 50
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.80 E-value=1.8e-18 Score=177.03 Aligned_cols=93 Identities=18% Similarity=0.169 Sum_probs=73.7
Q ss_pred EEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCC-eeeeEEeCCCcEEEEEEEec
Q 008109 454 LVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPI-ERNTVGVPSGGWVAIRFLAD 532 (577)
Q Consensus 454 ~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~-~rDTv~vp~~~~v~irf~ad 532 (577)
.+.++.|++++|++.|.+ ...|++++|+|.|+|++. |.+- ..|. ++||+.|.+|+.+.|.|.++
T Consensus 226 ~l~v~~Ger~Rl~n~~~~---~~~~~h~i~~h~~~Vi~d--G~~~----------~~p~~~~dtv~l~pGer~~v~v~a~ 290 (333)
T 1mzy_A 226 ALKAKVGDNVLFVHSQPN---RDSRPHLIGGHGDLVWET--GKFH----------NAPERDLETWFIRGGTAGAALYKFL 290 (333)
T ss_dssp CEEEETTCEEEEEEEESS---SCBCEEEETCCEEEEETT--CCTT----------SCCEEEESBCCBCTTEEEEEEEECC
T ss_pred ceEecCCCEEEEEECCCC---CccccEEECCCCeEEEeC--Cccc----------CCCccCcceEEECCCceEEEEEEcC
Confidence 468889999998877743 234455578888988872 3211 1122 58999999999999999999
Q ss_pred CceeEEEeeechhhh-hcccEEEEEEecCC
Q 008109 533 NPGVWFMHCHLEVHT-SWGLKTAWLVLDGK 561 (577)
Q Consensus 533 npG~w~~HCHil~H~-d~GM~~~~~V~~~~ 561 (577)
+||.|+||||++.|+ +.|||++|+|....
T Consensus 291 ~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 291 QPGVYAYVNHNLIEAVHKGATAHVLVEGEW 320 (333)
T ss_dssp SCEEEEEEESSHHHHHTTCCEEEEEEESCC
T ss_pred CCEEEEEecChhhhHhhCCCEEEEEEcCCC
Confidence 999999999999997 99999999998644
No 51
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.80 E-value=5.2e-21 Score=214.30 Aligned_cols=86 Identities=19% Similarity=0.388 Sum_probs=76.6
Q ss_pred EEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEecCc
Q 008109 455 VVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLADNP 534 (577)
Q Consensus 455 ~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~adnp 534 (577)
+.++.|++++|+|.|.+. ..+.||||||||.|+|++.+ +.++||+.|.||+++.|+|++|+|
T Consensus 370 l~v~~Ge~vr~rliN~g~-~~~~H~fHlhGh~f~Vv~~d-----------------g~~~Dtv~l~Pg~~~~v~~~ad~p 431 (770)
T 2r7e_B 370 LVMAQDQRIRWYLLSMGS-NENIHSIHFSGHVFTVRKKE-----------------EYKMALYNLYPGVFETVEMLPSKA 431 (770)
T ss_dssp CCCCSSSCEEEECCCCCS-SSCCCEEEBSSCCEECCSSS-----------------CCEESEEECCTTCCCEEEECCSSC
T ss_pred eEEeCCCEEEEEEEeCCC-CcceEEEEEcCCEEEEEecC-----------------CceeeEEEECCCeEEEEEEEeCCC
Confidence 466789999999999753 23589999999999998763 138999999999999999999999
Q ss_pred eeEEEeeechhhhhcccEEEEEEe
Q 008109 535 GVWFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 535 G~w~~HCHil~H~d~GM~~~~~V~ 558 (577)
|.|+||||+++|++.|||..|.|.
T Consensus 432 G~w~~hcH~~~H~~~GM~~~~~V~ 455 (770)
T 2r7e_B 432 GIWRVECLIGEHLHAGMSTLFLVY 455 (770)
T ss_dssp BCCCBCCCSHHHHTTBCCCCCCBC
T ss_pred CceEEEeccccccccccccccccc
Confidence 999999999999999999999884
No 52
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.77 E-value=5e-17 Score=166.54 Aligned_cols=107 Identities=20% Similarity=0.234 Sum_probs=80.1
Q ss_pred eEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCC--eeeeEEeCCCcEEEEEEE
Q 008109 453 KLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPI--ERNTVGVPSGGWVAIRFL 530 (577)
Q Consensus 453 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~--~rDTv~vp~~~~v~irf~ 530 (577)
+.+.++.|++++|+..+.+ ...+++++|||.|+|+. .|. +..|. +.||+.|++|+.+.|.+.
T Consensus 225 ~~l~v~~GervRlin~~~~---~~~~~~~i~gh~~~Vi~--DG~-----------~~~p~~~~~dtv~i~pGer~dvlv~ 288 (336)
T 1oe1_A 225 NALTAKVGETVLLIHSQAN---RDTRPHLIGGHGDWVWE--TGK-----------FANPPQRDLETWFIRGGSAGAALYT 288 (336)
T ss_dssp GCEEEETTCEEEEEEEESS---SCBCEEETTCCEEEEET--TCC-----------TTSCCEEEESBCCBCTTEEEEEEEE
T ss_pred cceEcCCCCEEEEEecCCC---CccceEEECCcCceEeC--CCc-----------CcCCccccceEEEECCCCcEEEEEE
Confidence 4578899999998666543 24566667999999985 332 12232 479999999999999999
Q ss_pred ecCceeEEEeeechhhh-hcccEEEEEEecCCCCCC-cCCCCCCCCC
Q 008109 531 ADNPGVWFMHCHLEVHT-SWGLKTAWLVLDGKLPNQ-KLLPPPADLP 575 (577)
Q Consensus 531 adnpG~w~~HCHil~H~-d~GM~~~~~V~~~~~~~~-~~~~~p~~~~ 575 (577)
+++||.|+||||.+.|. +.||++.|.|+....+.. .....|..+|
T Consensus 289 ~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~~~~~~~~~~~~~~~ 335 (336)
T 1oe1_A 289 FKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWNDDLMKQIKAPAPIP 335 (336)
T ss_dssp CCSCEEEEEEESSHHHHHTTSCEEEEEEESCCCTTTCCCSSCSCCCC
T ss_pred cCCCceEEEEechhhccccCCCeEEEEECCCCChHHhccCCCCCCCC
Confidence 99999999999999986 999999999986544322 3333344443
No 53
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.76 E-value=1.3e-17 Score=177.47 Aligned_cols=249 Identities=13% Similarity=0.118 Sum_probs=159.0
Q ss_pred CeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCC-CcEEEEEcCceeEEEEeCCcccCceEEeEEEECCCceE
Q 008109 193 DAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALN-DDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTT 271 (577)
Q Consensus 193 ~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pgeR~ 271 (577)
..+++||+. +.|+|+++.|++++||+.|.... ..+.+|+||+. ..||... ...|.||+++
T Consensus 49 ~~~~~ng~~---------pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~ 109 (442)
T 2zoo_A 49 VFWSFGETV---------PGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTS 109 (442)
T ss_dssp EEEEETTBS---------SCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEE
T ss_pred EEEEECCcC---------CCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEE
Confidence 678999985 45889999999999999999643 46679999975 3688642 2358999999
Q ss_pred EEEEEeCCCCCCceEEEEeeecccCCCCCCCCceEEEEEEecCCCccccCCCCCCCCCcCCCCCCCCCcccccccccccc
Q 008109 272 NVLLETKPHYPSATFFMTARPYVTGLGTFDNSTVAGILEYEKPLNFIHSGNSIKKLPLFKPILPPLNDTNFVTNFVNKLR 351 (577)
Q Consensus 272 dv~v~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~ 351 (577)
++.++++++ |+||++++....... ......+.+.+..... .+.. +.. +.--+.
T Consensus 110 ~y~f~~~~~---Gt~~yH~H~~~~~~~--~~~Gl~G~~iv~~~~~-----------------~~~~-d~e----~~l~l~ 162 (442)
T 2zoo_A 110 TFNFKALNP---GLYIYHCATAPVGMH--IANGMYGLILVEPKEG-----------------LAPV-DRE----YYLVQG 162 (442)
T ss_dssp EEEEECCSC---EEEEEECCCSSHHHH--HHTTCEEEEEEECTTC-----------------CCCC-SEE----EEEEEE
T ss_pred EEEEEcCCC---eEEEEecCCCChHHH--HhCccEEEEEEeCCCC-----------------CCCC-Cce----EEEEee
Confidence 999999886 999999964211000 0012344455542210 1111 000 000011
Q ss_pred ccCCCCCCCCCCCCCcceEEEEeccCccCCCCCCcccCCCCCeeEEEecceeccCCchhhhhhhhcCCCCCcccCCCCCC
Q 008109 352 SLGSAQFPANVPQNVDKRFFFTVGLGTSPCPRNQTCQGPNGTMFEASINNISFVMPTTALLQAHFTGQSNGVYVPDFPTS 431 (577)
Q Consensus 352 ~l~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~s~~~p~~~~l~~~~~~~~~g~~~~~~~~~ 431 (577)
...... ...........+.. ..+... -.+.|||+.+...
T Consensus 163 d~~~~~-------~~~~~~~~~~~~~~--------~~~~~~--~~~liNG~~~~~~------------------------ 201 (442)
T 2zoo_A 163 DFYTKG-------EFGEAGLQPFDMAK--------AIDEDA--DYVVFNGSVGSTT------------------------ 201 (442)
T ss_dssp EECBSS-------CTTCCEEECBCHHH--------HHTTCC--SEEEETTSTTTTS------------------------
T ss_pred eeeccC-------cccccccccCChhH--------hccCCC--CEEEECCCcCCCC------------------------
Confidence 110000 00000000000000 000000 1245665432100
Q ss_pred CCccccCCCCCCCCccccCCceEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCC
Q 008109 432 PLIPFNYTGNPPNNTMVSSGTKLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDP 511 (577)
Q Consensus 432 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p 511 (577)
....+.++.|++++|+|.|.+. ...|+||+|||.|+|++...+ ...|
T Consensus 202 -------------------~~~~l~v~~G~~vrlrliN~~~--~~~~~~~i~g~~~~vi~~DG~------------~~~p 248 (442)
T 2zoo_A 202 -------------------DENSLTAKVGETVRLYIGNGGP--NLVSSFHVIGEIFDTVYVEGG------------SLKN 248 (442)
T ss_dssp -------------------GGGCEEEETTCEEEEEEEEEES--SCCEEEEEETCCBSEEEGGGS------------SCEE
T ss_pred -------------------CCCceEeCCCCEEEEEEEeCCC--CCceeeEEcCCEEEEEecCCc------------cCCC
Confidence 0134678899999999999652 368999999999999998532 1236
Q ss_pred CeeeeEEeCCCcEEEEEEEecCceeEEEeeechhh-hhcccEEEEEEecCC
Q 008109 512 IERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVH-TSWGLKTAWLVLDGK 561 (577)
Q Consensus 512 ~~rDTv~vp~~~~v~irf~adnpG~w~~HCHil~H-~d~GM~~~~~V~~~~ 561 (577)
.+.|++.|.||+...|.|+++++|.|++|||...| .+.||+..|.|....
T Consensus 249 ~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 249 HNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPD 299 (442)
T ss_dssp CSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCC
T ss_pred ccceEEEECCCeeEEEEEEcCCCCeEEEEecccccccccCceEEEEecCCC
Confidence 78999999999999999999999999999999999 599999999997654
No 54
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.72 E-value=4.4e-16 Score=165.37 Aligned_cols=237 Identities=11% Similarity=0.123 Sum_probs=153.5
Q ss_pred eEEEEEEEEEEEeccC-----------ceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CceeeeE-cceeccCCC
Q 008109 29 TRHYKFNVELKNVTRL-----------CHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQ-HNISIHW-HGIRQLRSG 95 (577)
Q Consensus 29 ~~~~~l~~~~~~~~~~-----------g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~-HG~~~~~~~ 95 (577)
.+++.|.++.-....+ |.....+++||+. .|+|+|++| ++|+||.|... ....+|+ ||..+....
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~ 229 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVIS 229 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEE
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEE
Confidence 3466666665444332 3345789999995 699999999 99999999985 5688999 887655433
Q ss_pred CCCCCC-----CccccccCCCCeEEEEEEECCCceeeEEecccccccccc-e-----------EeEE-EeCCCCCCCCCC
Q 008109 96 WADGPA-----YITQCPIQTGQSYIYNFTIVGQRGTLWWHAHISWLRSTL-Y-----------GPII-ILPKRGIPYPFA 157 (577)
Q Consensus 96 ~~DGv~-----~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~Gl-~-----------G~li-V~~~~~~~~~~~ 157 (577)
.||.+ .+++..|.|||++++.+++ .+.|+||++++......|+ . .+++ .........+
T Consensus 230 -~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~-- 305 (451)
T 2uxt_A 230 -GDQGFLPAPVSVKQLSLAPGERREILVDM-SNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLV-- 305 (451)
T ss_dssp -CSSSEEEEEEEESSEEECTTCEEEEEEEC-TTCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred -eCCCccCCceEeceEEECceeEEEEEEEe-CCCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCc--
Confidence 89964 2567889999999999998 5789999999874432221 1 1111 1111100000
Q ss_pred CCCCeeeEEeeccccccHHHHHHHhhhCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEE
Q 008109 158 KPYKEVPIVFGEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLF 237 (577)
Q Consensus 158 ~~~~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~ 237 (577)
..+.+..+..+..............-. ..++|||+.++. ..+.+.++.|++++|+|+|. ..+.
T Consensus 306 --~~~~p~~L~~~~~~~~~~~~~~~~~l~------~~~~iNg~~f~~------~~~~~~~~~G~~~~~~l~N~---~~HP 368 (451)
T 2uxt_A 306 --TDSLPMRLLPTEIMAGSPIRSRDISLG------DDPGINGQLWDV------NRIDVTAQQGTWERWTVRAD---EPQA 368 (451)
T ss_dssp ----CCCSCSSSSCCCCCCCSEEEEEEEC------SSSSBTTBCCCT------TCCCEEEETTCEEEEEEEEE---EEEE
T ss_pred --cccCccccCCCCCCCCCCcceEEEEEe------eEEEECCEeCCC------CCCcEEcCCCCEEEEEEECC---CCcC
Confidence 000000010000000000000000000 036799998642 34568999999999999998 4678
Q ss_pred EEEcCceeEEEEeCCccc---CceEEeEEEECCCceEEEEEEeCCCCCCce----EEEEeeec
Q 008109 238 FSIANHTLTVVEVDAVYV---KPFETETLVITPGQTTNVLLETKPHYPSAT----FFMTARPY 293 (577)
Q Consensus 238 ~~i~gh~~~via~DG~~v---~P~~~d~l~l~pgeR~dv~v~~~~~~~~g~----y~l~~~~~ 293 (577)
||||||.|+|++.||.+. +|..+|++.| |+++.|.++++++ |. |.++|+-.
T Consensus 369 ~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~dnp---g~~~g~w~~HCHil 426 (451)
T 2uxt_A 369 FHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFGQP---SWAHFPFYFNSQTL 426 (451)
T ss_dssp EEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECCSC---CBTTBCEEEEESSH
T ss_pred eEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeCCC---CCCCCceEEeCCch
Confidence 999999999999999875 4788999999 9999999999987 55 99999964
No 55
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.70 E-value=8.7e-16 Score=162.83 Aligned_cols=214 Identities=14% Similarity=0.180 Sum_probs=154.9
Q ss_pred ceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CceeeeEcceeccCCCCCCCCCC-----ccccccCCCCeEEEEE
Q 008109 45 CHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQ-HNISIHWHGIRQLRSGWADGPAY-----ITQCPIQTGQSYIYNF 118 (577)
Q Consensus 45 g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-----~tq~~i~PG~~~~Y~~ 118 (577)
|.....+++||+. .|.|+|++| ++|+||.|... ....+|++|....... .||.+- +....|.|||+++..+
T Consensus 174 g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~-~DG~~~~~p~~~~~l~l~pgeR~dv~v 250 (439)
T 2xu9_A 174 GKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIA-ADGGFLEEPLEVSELLLAPGERAEVLV 250 (439)
T ss_dssp CCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEEESCEEECTTCEEEEEE
T ss_pred CCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEe-cCCCCCCCceEeceEEECCceeEEEEE
Confidence 3455789999997 699999999 99999999985 4688999998765433 788652 3456799999999999
Q ss_pred EECCCceeeEEeccccccc----ccc--------------eEeEEEeCCCC-CCCCCCCC------------CCeeeEEe
Q 008109 119 TIVGQRGTLWWHAHISWLR----STL--------------YGPIIILPKRG-IPYPFAKP------------YKEVPIVF 167 (577)
Q Consensus 119 ~~~~~~Gt~wYH~H~~~~~----~Gl--------------~G~liV~~~~~-~~~~~~~~------------~~e~~l~~ 167 (577)
++ +++|.||++++..... .|| ....+++.... ...+.+.. ++++.+.+
T Consensus 251 ~~-~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~l~~~~~l~~~~~~r~~~l~~ 329 (439)
T 2xu9_A 251 RL-RKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKPLPLPKALSPFPTLPAPVVTRRLVLTE 329 (439)
T ss_dssp EC-CSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCCCCCCSCCCCCCCCCCCSEEEEEEEEE
T ss_pred Ec-CCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCccccCcccCCCcccCCCCCcceEEEEEe
Confidence 97 6699999999853211 122 11222222111 11111100 01111111
Q ss_pred eccccccHHHHHHHhhhCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEE
Q 008109 168 GEWFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTV 247 (577)
Q Consensus 168 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v 247 (577)
.. .+..+.|||+.+.. ..+.+.++.|++++|+|.|.+. ..+.||||||.|+|
T Consensus 330 ~~---------------------~g~~~~iNg~~~~~------~~~~~~~~~g~~~~~~~~N~~~-~~HP~HLHG~~F~V 381 (439)
T 2xu9_A 330 DM---------------------MAARFFINGQVFDH------RRVDLKGQAQTVEVWEVENQGD-MDHPFHLHVHPFQV 381 (439)
T ss_dssp EG---------------------GGTEEEETTBCCCT------TCCCEEECTTCEEEEEEEECSS-SCEEEEESSCCBEE
T ss_pred ec---------------------cCceEeECCEECCC------CCCceecCCCCEEEEEEEcCCC-CCCCceeCCCcEEE
Confidence 00 11368899998642 2345899999999999999974 45679999999999
Q ss_pred EEeCCccc-CceEEeEEEECCCceEEEEEEeCCCCCCceEEEEeeec
Q 008109 248 VEVDAVYV-KPFETETLVITPGQTTNVLLETKPHYPSATFFMTARPY 293 (577)
Q Consensus 248 ia~DG~~v-~P~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~ 293 (577)
++.+|... .|..+|++.|.||+++.+.++++++ |.|.++|+-.
T Consensus 382 l~~~g~~~~~p~~rDTv~v~p~~~v~i~f~adnp---G~w~~HCHil 425 (439)
T 2xu9_A 382 LSVGGRPFPYRAWKDVVNLKAGEVARLLVPLREK---GRTVFHCHIV 425 (439)
T ss_dssp EEETTEECSSCCCBSEEEECTTCEEEEEEECCSC---EEEEEEESSH
T ss_pred EeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcCCC---CCEEEECCcc
Confidence 99999876 6889999999999999999999888 9999999954
No 56
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.61 E-value=5.9e-14 Score=151.18 Aligned_cols=240 Identities=14% Similarity=0.142 Sum_probs=155.2
Q ss_pred eEEEEECCCCC--------CCeEEEecCCEEEEEEEeCCC-CceeeeEcceeccCCCCCCCCCC----ccccccCCCCeE
Q 008109 48 KTLVSVNGQFP--------GPRIVAREGDRLLIKVVNHVQ-HNISIHWHGIRQLRSGWADGPAY----ITQCPIQTGQSY 114 (577)
Q Consensus 48 ~~~~~~ng~~p--------gP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~~----~tq~~i~PG~~~ 114 (577)
...+++||+.. .|+|+|++|+++|+||.|... ....+|++|..+.-.. .||.+- +....|.|||++
T Consensus 165 ~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgeR~ 243 (503)
T 1hfu_A 165 PDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIE-VDGELTEPHTVDRLQIFTGQRY 243 (503)
T ss_dssp CSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTCEE
T ss_pred CCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEe-ccCccccccccCeEEEcccceE
Confidence 46789999863 289999999999999999985 4678999888665432 788541 345678999999
Q ss_pred EEEEEECCCceeeEEecccccc-------c-ccceEeEEEeCCCCCCCCCCCCCCeeeEEeeccccccH--HHH----H-
Q 008109 115 IYNFTIVGQRGTLWWHAHISWL-------R-STLYGPIIILPKRGIPYPFAKPYKEVPIVFGEWFKSDT--EAI----I- 179 (577)
Q Consensus 115 ~Y~~~~~~~~Gt~wYH~H~~~~-------~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~--~~~----~- 179 (577)
+..+++.+.+|.||.+++.... . .++..+++.........|......+. ..+.+...... ... .
T Consensus 244 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~-~~l~~~~l~p~~~~~~p~~~~~ 322 (503)
T 1hfu_A 244 SFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP-AQLNEADLHALIDPAAPGIPTP 322 (503)
T ss_dssp EEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC-CBCCGGGCBBSSSCSCSSCSST
T ss_pred EEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc-CCCccccccccCccCCCCcccC
Confidence 9999985558999999985311 1 23433444332221111110000000 00000000000 000 0
Q ss_pred ---HHhhhCCCCCCCCCeEEEcCcCCCCCCC-------------C--CCceeEEEEecCCEEEEEEEecCCCCcEEEEEc
Q 008109 180 ---NQALQTGGGPNVSDAYTFNGLPGPLYNC-------------S--AKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIA 241 (577)
Q Consensus 180 ---~~~~~~~~~~~~~~~~liNG~~~~~~~~-------------~--~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~ 241 (577)
...+.-... ..+..+.|||+.+..-.. + ......+.++.|++++++++|......+.||||
T Consensus 323 ~~~~~~~~l~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLH 401 (503)
T 1hfu_A 323 GAADVNLRFQLG-FSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLH 401 (503)
T ss_dssp TCSSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEET
T ss_pred CcceEEEEEEee-ccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccCCCEEEEEEECCCCCCCCCEEEe
Confidence 000000000 011268899998642110 0 012357899999999999995444556789999
Q ss_pred CceeEEEEeCCccc----CceEEeEEEE-CCCceEEEEEEeCCCCCCceEEEEeeec
Q 008109 242 NHTLTVVEVDAVYV----KPFETETLVI-TPGQTTNVLLETKPHYPSATFFMTARPY 293 (577)
Q Consensus 242 gh~~~via~DG~~v----~P~~~d~l~l-~pgeR~dv~v~~~~~~~~g~y~l~~~~~ 293 (577)
||.|+|++.+|... .|..+|++.| .||+++.|.++++++ |.|.++|+..
T Consensus 402 Gh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~adnP---G~W~~HCHil 455 (503)
T 1hfu_A 402 GHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDNP---GPWFFHCHIE 455 (503)
T ss_dssp TCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECCSC---EEEEEEESSH
T ss_pred cceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcCCC---eeeeEecCch
Confidence 99999999999753 6889999999 799999999999998 9999999963
No 57
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.61 E-value=5.3e-14 Score=152.10 Aligned_cols=236 Identities=16% Similarity=0.189 Sum_probs=154.7
Q ss_pred eEEEEECCCCC---------CCeEEEecCCEEEEEEEeCCC-CceeeeEcceeccCCCCCCCCCC----ccccccCCCCe
Q 008109 48 KTLVSVNGQFP---------GPRIVAREGDRLLIKVVNHVQ-HNISIHWHGIRQLRSGWADGPAY----ITQCPIQTGQS 113 (577)
Q Consensus 48 ~~~~~~ng~~p---------gP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~~----~tq~~i~PG~~ 113 (577)
...+++||+.. -|+|+|++|+++|+||.|... ....+|++|..+.... .||.+- +....|.|||+
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIE-VDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEe-cCCccccceeeeeEEEcccce
Confidence 46789999853 189999999999999999985 4678999888765433 788542 34567999999
Q ss_pred EEEEEEECCCceeeEEecccccc---c-ccceEeEEEeCCCCCCCCCCCCCCeeeEEeeccccccH-----HH--H---H
Q 008109 114 YIYNFTIVGQRGTLWWHAHISWL---R-STLYGPIIILPKRGIPYPFAKPYKEVPIVFGEWFKSDT-----EA--I---I 179 (577)
Q Consensus 114 ~~Y~~~~~~~~Gt~wYH~H~~~~---~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~-----~~--~---~ 179 (577)
++..+++.+.+|.||.+++.... . .|+..+++.........+..... . ...+.+...... .. . .
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~-~~~~~~~~l~p~~~~~~p~~~~~~~~ 347 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-S-GTALNEANLIPLINPGAPGNPVPGGA 347 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-C-SCBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-c-ccccchhhcccCCcccCCCcccCCcc
Confidence 99999985557999999986421 1 34434444433221111110000 0 000000000000 00 0 0
Q ss_pred HH--hhhCCCCCCCCCeEEEcCcCCCCCCC-------------C--CCceeEEEEecCCEEEEEEEecCCCCcEEEEEcC
Q 008109 180 NQ--ALQTGGGPNVSDAYTFNGLPGPLYNC-------------S--AKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIAN 242 (577)
Q Consensus 180 ~~--~~~~~~~~~~~~~~liNG~~~~~~~~-------------~--~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~g 242 (577)
.. .+..+... ....+.|||+.+..-.. + ......+.++.|++++++++| ...+.|||||
T Consensus 348 ~~~~~l~~~~~~-~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N---~~~HP~HLHG 423 (521)
T 1v10_A 348 DINLNLRIGRNA-TTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG---GGNHPFHLHG 423 (521)
T ss_dssp SEEEECCEECCS-SSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC---CBSCEEEESS
T ss_pred eEEEEEEEecCC-ceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC---CCCCCEEEcc
Confidence 00 00000000 01257899998642110 0 012357899999999999999 3566899999
Q ss_pred ceeEEEEeCCcc----cCceEEeEEEE-CCCceEEEEEEeCCCCCCceEEEEeeec
Q 008109 243 HTLTVVEVDAVY----VKPFETETLVI-TPGQTTNVLLETKPHYPSATFFMTARPY 293 (577)
Q Consensus 243 h~~~via~DG~~----v~P~~~d~l~l-~pgeR~dv~v~~~~~~~~g~y~l~~~~~ 293 (577)
|.|+|++.+|.. ..|..+|++.| .||+++.|.++++++ |.|.++|+-.
T Consensus 424 h~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNP---G~W~~HCHi~ 476 (521)
T 1v10_A 424 HNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNP---GPWFLHCHID 476 (521)
T ss_dssp CCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCSC---EEEEEEESCH
T ss_pred ceEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeCCC---eeEEEeeChH
Confidence 999999999875 26889999999 799999999999998 9999999963
No 58
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.58 E-value=1.4e-13 Score=146.36 Aligned_cols=222 Identities=15% Similarity=0.194 Sum_probs=153.1
Q ss_pred eeEEEEECCCCCCCeEEEecCCEEEEEEEeCC-CCceeeeEcceeccCCCCCCCCC-----CccccccCCCCeEEEEEEE
Q 008109 47 TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHV-QHNISIHWHGIRQLRSGWADGPA-----YITQCPIQTGQSYIYNFTI 120 (577)
Q Consensus 47 ~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l-~~~~~iH~HG~~~~~~~~~DGv~-----~~tq~~i~PG~~~~Y~~~~ 120 (577)
....+++||+. .|+|.|++|+ |+||.|.. .....+|++|....... .||.. .++...|.|||+++..+++
T Consensus 210 ~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa-~DGg~~~~P~~~~~l~l~pgeR~dvlv~~ 285 (481)
T 3zx1_A 210 EGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVG-TDGGLIEKTIYKEELFLSPASRVEVLIDA 285 (481)
T ss_dssp CCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEE-ETTEEEEEEEEESSEEECTTCEEEEEEEC
T ss_pred cCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEE-cCCCccCCceEeCeEEECCccEEEEEEEc
Confidence 34678999996 5899999999 99999998 56788999998755433 78732 2345789999999999997
Q ss_pred CCCceeeEEeccccccc---------ccceEeEEEeCCCCCCCC--------CCCCCCeeeEEeeccccc------c-HH
Q 008109 121 VGQRGTLWWHAHISWLR---------STLYGPIIILPKRGIPYP--------FAKPYKEVPIVFGEWFKS------D-TE 176 (577)
Q Consensus 121 ~~~~Gt~wYH~H~~~~~---------~Gl~G~liV~~~~~~~~~--------~~~~~~e~~l~~~d~~~~------~-~~ 176 (577)
.+.|+|..-++..... .....-+-+.... ...| .+..+..+.+.++....+ . ..
T Consensus 286 -~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~lP~~l~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~ 363 (481)
T 3zx1_A 286 -PKDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKEN-VELPKNLKIFKPSEEPKEFKEIIMSEDHMQMHGMMGKSEG 363 (481)
T ss_dssp -SSCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCC-CCCCSCSCCCCCCCCCCEEEEEEEEECCSTTTTGGGCCHH
T ss_pred -CCCcEEEEEEecccccCccccCCCCceeEEEEecCCCC-ccCCccccCCCCCCCCCcEEEEEEeccchhcccccccccc
Confidence 6788888776542210 0011112222211 1111 111223334444321100 0 00
Q ss_pred HHHHHhhhCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEe--CCcc
Q 008109 177 AIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEV--DAVY 254 (577)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~--DG~~ 254 (577)
.. ...+ ...++|||+.+.. ..+.+.++.|++++|+|.|.+ ...+.||||||+|+|++. ||..
T Consensus 364 ~~-~~~~--------~~~~~iNG~~~~~------~~~~~~~~~G~~v~w~l~N~~-~~~Hp~HlHG~~F~vl~~~~~g~~ 427 (481)
T 3zx1_A 364 EL-KIAL--------ASMFLINRKSYDL------KRIDLSSKLGVVEDWIVINKS-HMDHPFHIHGTQFELISSKLNGKV 427 (481)
T ss_dssp HH-HHHH--------HTTEEETTBCCCT------TCCCEEEETTCCEEEEEEECS-SSCEEEEETTCCEEEEEEEETTEE
T ss_pred cc-cccc--------cceeEECCEeCCC------CCceEEeCCCCEEEEEEEcCC-CCceeEEEeccEEEEEEecccCCC
Confidence 00 0000 1348999997632 346799999999999999976 556789999999999999 9987
Q ss_pred c---CceEEeEEEECCCceEEEEEEeCCCCCCceEEEEeeec
Q 008109 255 V---KPFETETLVITPGQTTNVLLETKPHYPSATFFMTARPY 293 (577)
Q Consensus 255 v---~P~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~ 293 (577)
. ++..+|++.|.||+++.|.++++.+ |.|.++|+..
T Consensus 428 ~~~~~~~~kDTv~v~Pg~~~~i~~~~d~p---G~w~~HCHil 466 (481)
T 3zx1_A 428 QKAEFRALRDTINVRPNEELRLRMKQDFK---GLRMYHCHIL 466 (481)
T ss_dssp EECSSCCEESEEEECTTCEEEEEECCCSC---EEEEEEESSH
T ss_pred CCcccCcccceEEECCCCEEEEEEEcCCC---eeEEEEcCCh
Confidence 6 4678999999999999999999888 9999999864
No 59
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.58 E-value=7.2e-16 Score=129.95 Aligned_cols=90 Identities=20% Similarity=0.169 Sum_probs=70.9
Q ss_pred CCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCC--CCCCCCCCccccccCCCCeEEEEEEECCCceeeEEecc
Q 008109 55 GQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRS--GWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAH 132 (577)
Q Consensus 55 g~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~--~~~DGv~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H 132 (577)
-++++|+|++++||+|+ ++|.+..++++||||...+.. ..+||.+ .+++.|.||++++|+|++++++|+||||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~ 90 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYCA 90 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEECT
T ss_pred cEEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEeC
Confidence 36778999999999975 679998999999999876531 0123332 356789999999999986578999999999
Q ss_pred cccccccceEeEEEeC
Q 008109 133 ISWLRSTLYGPIIILP 148 (577)
Q Consensus 133 ~~~~~~Gl~G~liV~~ 148 (577)
.| ..+||.|.|+|++
T Consensus 91 ~H-~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 PH-RGAGMVGKITVEG 105 (105)
T ss_dssp TT-GGGTCEEEEEECC
T ss_pred Cc-hhcCCEEEEEEcC
Confidence 43 2479999999974
No 60
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.53 E-value=1e-12 Score=140.65 Aligned_cols=240 Identities=15% Similarity=0.137 Sum_probs=152.9
Q ss_pred eeEEEEECCCC---------CCCeEEEecCCEEEEEEEeCCC-CceeeeEcceeccCCCCCCCCCC----ccccccCCCC
Q 008109 47 TKTLVSVNGQF---------PGPRIVAREGDRLLIKVVNHVQ-HNISIHWHGIRQLRSGWADGPAY----ITQCPIQTGQ 112 (577)
Q Consensus 47 ~~~~~~~ng~~---------pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~~----~tq~~i~PG~ 112 (577)
....+++||+- +-|.|+|++|+++|+||.|... ....+|++|..+.... .||.+- +....|.|||
T Consensus 167 ~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGq 245 (495)
T 3t6v_A 167 TADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIE-TDGVDSQELTVDEIQIFAAQ 245 (495)
T ss_dssp CCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTC
T ss_pred CCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-eCCcccCCEEeeeEEEcCce
Confidence 35788999963 3479999999999999999874 5678888888755433 788641 3456799999
Q ss_pred eEEEEEEECCCceeeEEecccccc---c-ccceEeEEEeCCCCCCCCCCCCCC-eeeEEeeccccccHH-------HHH-
Q 008109 113 SYIYNFTIVGQRGTLWWHAHISWL---R-STLYGPIIILPKRGIPYPFAKPYK-EVPIVFGEWFKSDTE-------AII- 179 (577)
Q Consensus 113 ~~~Y~~~~~~~~Gt~wYH~H~~~~---~-~Gl~G~liV~~~~~~~~~~~~~~~-e~~l~~~d~~~~~~~-------~~~- 179 (577)
+++..+++.+.+|.||.++..... . .|..-+++.........|...... ... .+.+....... ...
T Consensus 246 R~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~ 324 (495)
T 3t6v_A 246 RYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTK-CLIETDLHPLSRNGVPGNPHQG 324 (495)
T ss_dssp EEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSS-BCCGGGCCBSSCCCCSSCSSTT
T ss_pred EEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCcc-ccccccccccccccCCCccCCC
Confidence 999999985567999999875321 1 233334444432211111100000 000 00000000000 000
Q ss_pred --HHhhhCCCCCCCCCeEEEcCcCCCCCCC-----------C----CCceeEEEEecCCEEEEEEEecCCCCcEEEEEcC
Q 008109 180 --NQALQTGGGPNVSDAYTFNGLPGPLYNC-----------S----AKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIAN 242 (577)
Q Consensus 180 --~~~~~~~~~~~~~~~~liNG~~~~~~~~-----------~----~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~g 242 (577)
.....-. ....+..+.|||+.+..-.. + .....++.++.|++++|.|.|......+.|||||
T Consensus 325 ~~d~~~~l~-~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHG 403 (495)
T 3t6v_A 325 GADCNLNLS-LGFACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHG 403 (495)
T ss_dssp CSSEEEECC-EEEETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETT
T ss_pred CCcEEEEEE-EEecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecC
Confidence 0000000 00011367899987632100 0 0123478999999999999843334566899999
Q ss_pred ceeEEEEeCCccc----CceEEeEEEECC-CceEEEEEEeCCCCCCceEEEEeee
Q 008109 243 HTLTVVEVDAVYV----KPFETETLVITP-GQTTNVLLETKPHYPSATFFMTARP 292 (577)
Q Consensus 243 h~~~via~DG~~v----~P~~~d~l~l~p-geR~dv~v~~~~~~~~g~y~l~~~~ 292 (577)
|.|+|++.+|... .|...|++.|.+ |+.+.+.++++++ |.|.++|+.
T Consensus 404 h~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~adnP---G~W~~HCHi 455 (495)
T 3t6v_A 404 HDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNP---GPWFLHCHI 455 (495)
T ss_dssp CCEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECCSC---EEEEEEESC
T ss_pred CcEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcCCC---eeEEEEecc
Confidence 9999999988654 688999999997 9999999999998 999999985
No 61
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.50 E-value=1.1e-12 Score=139.48 Aligned_cols=235 Identities=11% Similarity=0.102 Sum_probs=149.4
Q ss_pred eeEEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CceeeeE-cceeccCCCCCCCCC-----CccccccCCCCeEEEEEE
Q 008109 47 TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQ-HNISIHW-HGIRQLRSGWADGPA-----YITQCPIQTGQSYIYNFT 119 (577)
Q Consensus 47 ~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~-HG~~~~~~~~~DGv~-----~~tq~~i~PG~~~~Y~~~ 119 (577)
....+++||+. .|.+.+ +|+++|+||.|... ....+++ +|....-.. .||.+ .++...|.|||+++..++
T Consensus 182 ~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa-~DG~~l~~P~~~~~l~l~pGeR~dvlv~ 258 (488)
T 3od3_A 182 FGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIA-SDGGLLPEPVKVSELPVLMGERFEVLVE 258 (488)
T ss_dssp CCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEE-ETTEEEEEEEEESCEEECTTCEEEEEEE
T ss_pred CCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEE-eCCCcccCccEeceEEECCCCEEEEEEE
Confidence 34678999996 488876 67899999999984 5677877 676543322 78843 245678999999999999
Q ss_pred ECCCceeeEEecccccccccc-----e---EeEEEeC-----CCCCCC-----C-CCC----CCCeeeEEeecc-ccccH
Q 008109 120 IVGQRGTLWWHAHISWLRSTL-----Y---GPIIILP-----KRGIPY-----P-FAK----PYKEVPIVFGEW-FKSDT 175 (577)
Q Consensus 120 ~~~~~Gt~wYH~H~~~~~~Gl-----~---G~liV~~-----~~~~~~-----~-~~~----~~~e~~l~~~d~-~~~~~ 175 (577)
+ .+.++|+.-+..... .|+ . -.+-|.+ ....+. + .+. ..+++.+.+..- .....
T Consensus 259 ~-~~~~~~~l~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~ 336 (488)
T 3od3_A 259 V-NDNKPFDLVTLPVSQ-MGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLDMMGM 336 (488)
T ss_dssp E-CTTCCEEEEECCCSS-TTTTSTTTTSCEEEEEEEEEEEECCCCCCSCCCCCCCCCCCTTCCEEEEEEEECHHHHHHHH
T ss_pred e-CCCceEEEEEeccCC-CCcccccccCccceeEecccccCCCCCCCcccccCCCCcccccccceEEEEEeccccccccc
Confidence 8 567788776543221 111 0 0111221 111110 1 010 113334433210 00000
Q ss_pred HHHHHHhh---hCCC----------CC-C----------CCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecC
Q 008109 176 EAIINQAL---QTGG----------GP-N----------VSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSA 231 (577)
Q Consensus 176 ~~~~~~~~---~~~~----------~~-~----------~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~ 231 (577)
..+...+. ..+. .. . ....++|||+.++. ..+.++++.|+++||+|+|.+
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~~~------~~~~~~~~~G~~e~w~l~N~~ 410 (488)
T 3od3_A 337 QMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDM------NKPMFAAAKGQYERWVISGVG 410 (488)
T ss_dssp HHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCCCT------TCCSEECCBSSCEEEEEECTT
T ss_pred ccccccccccccccccccccccccccCccccccccccccccceeeECCeeCCC------CCCceEcCCCCEEEEEEEeCC
Confidence 01111000 0000 00 0 01247999998642 356789999999999999999
Q ss_pred CCCcEEEEEcCceeEEEEeCCcccC---ceEEeEEEECCCceEEEEEEeCCCC-CCceEEEEeeec
Q 008109 232 LNDDLFFSIANHTLTVVEVDAVYVK---PFETETLVITPGQTTNVLLETKPHY-PSATFFMTARPY 293 (577)
Q Consensus 232 ~~~~~~~~i~gh~~~via~DG~~v~---P~~~d~l~l~pgeR~dv~v~~~~~~-~~g~y~l~~~~~ 293 (577)
....+.|||||++|+|++.||.... +..+|++.|. |++++|+++++.+. ..|.|.++|+..
T Consensus 411 ~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l 475 (488)
T 3od3_A 411 DMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLL 475 (488)
T ss_dssp CCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSH
T ss_pred CCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCch
Confidence 6667889999999999999998774 3578999999 99999999998642 127999999864
No 62
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.49 E-value=3.5e-12 Score=138.05 Aligned_cols=240 Identities=12% Similarity=0.114 Sum_probs=151.0
Q ss_pred eEEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CceeeeEcceeccCCCCCCCCCC----ccccccCCCCeEEEEEEECC
Q 008109 48 KTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQ-HNISIHWHGIRQLRSGWADGPAY----ITQCPIQTGQSYIYNFTIVG 122 (577)
Q Consensus 48 ~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~~----~tq~~i~PG~~~~Y~~~~~~ 122 (577)
...+++||+. .|+|+|++|+++|+||.|... ....+|++|..+.... .||++- +....|.|||+++..+++.+
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVE-IDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEe-ccCcCccccEeceEEECccceEEEEEEcCC
Confidence 4678999996 599999999999999999984 5677888887655433 788542 34567999999999999853
Q ss_pred C-ceeeEEeccccccc-------ccceEeEEEeCCCCCCCCCCCCCCeeeEEeeccccccH--HHH----HHH-hh--hC
Q 008109 123 Q-RGTLWWHAHISWLR-------STLYGPIIILPKRGIPYPFAKPYKEVPIVFGEWFKSDT--EAI----INQ-AL--QT 185 (577)
Q Consensus 123 ~-~Gt~wYH~H~~~~~-------~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~--~~~----~~~-~~--~~ 185 (577)
+ .|.||......... ....+..+++-......+.+....+....+.|...... ... ... .+ ..
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~~ 324 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVVM 324 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEEE
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEEe
Confidence 3 57999998754321 11222233332221111100000000000000000000 000 000 00 00
Q ss_pred CCCCCCCCeEEEcCcCCCCCCC--------------CC----CceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEE
Q 008109 186 GGGPNVSDAYTFNGLPGPLYNC--------------SA----KDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTV 247 (577)
Q Consensus 186 ~~~~~~~~~~liNG~~~~~~~~--------------~~----~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v 247 (577)
.........++|||+.+..-.. +. .....+.++.|++++|.|.|.+. ..+.||||||.|+|
T Consensus 325 ~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~-~~HP~HLHGh~F~V 403 (534)
T 1zpu_A 325 DNLKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDT-GTHPFHLHGHAFQT 403 (534)
T ss_dssp EECTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECSS-SCEEEEETTCCEEE
T ss_pred eccCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCCC-CCCCeEecCCceEE
Confidence 0000112467899987532100 00 01346899999999999999874 45689999999999
Q ss_pred EEeCCc-----------c---------cCceEEeEEEECCCceEEEEEEeCCCCCCceEEEEeeec
Q 008109 248 VEVDAV-----------Y---------VKPFETETLVITPGQTTNVLLETKPHYPSATFFMTARPY 293 (577)
Q Consensus 248 ia~DG~-----------~---------v~P~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~ 293 (577)
++.++. + ..|...|++.|.||+.+.|.|+++++ |.|.++|+-.
T Consensus 404 l~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aDNP---G~W~~HCHi~ 466 (534)
T 1zpu_A 404 IQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADNP---GVWFFHCHIE 466 (534)
T ss_dssp EEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECCSC---EEEEEEECCH
T ss_pred EeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeCCC---eeEEEEeCch
Confidence 998853 1 24788999999999999999999998 9999999953
No 63
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.49 E-value=3e-12 Score=136.98 Aligned_cols=240 Identities=14% Similarity=0.120 Sum_probs=151.4
Q ss_pred eeEEEEECCCC--------CCCeEEEecCCEEEEEEEeCCC-CceeeeEcceeccCCCCCCCCCC----ccccccCCCCe
Q 008109 47 TKTLVSVNGQF--------PGPRIVAREGDRLLIKVVNHVQ-HNISIHWHGIRQLRSGWADGPAY----ITQCPIQTGQS 113 (577)
Q Consensus 47 ~~~~~~~ng~~--------pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~~----~tq~~i~PG~~ 113 (577)
....+++||+- +-|.|+|++|+++|+||.|... ....+|++|..+.... .||.+- +....|.|||+
T Consensus 165 ~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGqR 243 (499)
T 3pxl_A 165 GADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIE-VDSVNSQPLEVDSIQIFAAQR 243 (499)
T ss_dssp SCSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-ECCcccCceEeeeEEECCCcE
Confidence 35778999973 3479999999999999999884 5678899998765433 788641 34567999999
Q ss_pred EEEEEEECCCceeeEEecccccc---c-ccceEeEEEeCCCCCCCCCCCCCCeeeEEeeccccccHH-------HHH---
Q 008109 114 YIYNFTIVGQRGTLWWHAHISWL---R-STLYGPIIILPKRGIPYPFAKPYKEVPIVFGEWFKSDTE-------AII--- 179 (577)
Q Consensus 114 ~~Y~~~~~~~~Gt~wYH~H~~~~---~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~-------~~~--- 179 (577)
++..+++.+.+|.||..+..... . .+..-+++.........|......... .+.+....... ...
T Consensus 244 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~~~ 322 (499)
T 3pxl_A 244 YSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSVK-PLNEVDLHPLVSTPVPGAPSSGGV 322 (499)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCSS-BCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCCc-ccccccccccccccCCCcccCCCC
Confidence 99999985567999999865321 1 222223333322211111100000000 00010000000 000
Q ss_pred HHhhhCCCCCCCCCeEEEcCcCCCCCCC-----------C----CCceeEEEEecCCEEEEEEEecC--CCCcEEEEEcC
Q 008109 180 NQALQTGGGPNVSDAYTFNGLPGPLYNC-----------S----AKDTFKLKVKSGKTYLLRLVNSA--LNDDLFFSIAN 242 (577)
Q Consensus 180 ~~~~~~~~~~~~~~~~liNG~~~~~~~~-----------~----~~~~~~l~v~~G~~~rlRliN~~--~~~~~~~~i~g 242 (577)
.....-. ....+..+.|||+.+..-.. + ......+.++.|++++|.|.|.+ ....+.|||||
T Consensus 323 d~~~~l~-~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHG 401 (499)
T 3pxl_A 323 DKAINMA-FNFNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHG 401 (499)
T ss_dssp SEEEECC-EEECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETT
T ss_pred cEEEEEE-EEecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCccceecC
Confidence 0000000 00012357899987532100 0 01235789999999999999422 23456899999
Q ss_pred ceeEEEEeCCccc----CceEEeEEEECC---CceEEEEEEeCCCCCCceEEEEeee
Q 008109 243 HTLTVVEVDAVYV----KPFETETLVITP---GQTTNVLLETKPHYPSATFFMTARP 292 (577)
Q Consensus 243 h~~~via~DG~~v----~P~~~d~l~l~p---geR~dv~v~~~~~~~~g~y~l~~~~ 292 (577)
|.|+|++.+|... .|...|++.|.+ |+.+.+.++++++ |.|.++|+.
T Consensus 402 h~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnP---G~W~~HCHi 455 (499)
T 3pxl_A 402 HTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNP---GPWFLHCHI 455 (499)
T ss_dssp CCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECCSC---EEEEEEESS
T ss_pred CcEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcCCC---ceEEEEeCC
Confidence 9999999888643 688999999986 9999999999998 999999985
No 64
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.48 E-value=2.3e-12 Score=140.47 Aligned_cols=222 Identities=17% Similarity=0.203 Sum_probs=140.5
Q ss_pred eEEEecCCEEEEEEEeCCC-CceeeeEcceeccCCCCCCCCC----CccccccCCCCeEEEEEEE-CCCceeeEEecccc
Q 008109 61 RIVAREGDRLLIKVVNHVQ-HNISIHWHGIRQLRSGWADGPA----YITQCPIQTGQSYIYNFTI-VGQRGTLWWHAHIS 134 (577)
Q Consensus 61 ~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~PG~~~~Y~~~~-~~~~Gt~wYH~H~~ 134 (577)
+|+|++|+++|+||.|... ....+|++|..+.... .||.+ .+....|.|||+++..+++ .+.+|.||.+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVE-ADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEE-ECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 8999999999999999984 5678899888665432 78853 2345679999999999998 34589999999875
Q ss_pred ccc-ccc--eEeEEEeCCCCCCCCCCCCCCeeeEEeeccccccHHHHHHHhhh------CCCCC----------------
Q 008109 135 WLR-STL--YGPIIILPKRGIPYPFAKPYKEVPIVFGEWFKSDTEAIINQALQ------TGGGP---------------- 189 (577)
Q Consensus 135 ~~~-~Gl--~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~------~~~~~---------------- 189 (577)
... ... .+.|-.........+... ....+ .| ++........+. ....+
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~-~p~~p----~~--~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~ 356 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSP-PPQTP----AW--DDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVI 356 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSC-CCCCC----CT--TCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEEE
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCC-CCCCC----cc--ccccccccccccccccCCCCCCCCCCcEEEEEEEeeccC
Confidence 311 112 222223222210101000 00000 00 000000000000 00000
Q ss_pred CCCCeEEEcCcCCCC-----------------------------CCCCC--------CceeEEEEecCCEEEEEEEecCC
Q 008109 190 NVSDAYTFNGLPGPL-----------------------------YNCSA--------KDTFKLKVKSGKTYLLRLVNSAL 232 (577)
Q Consensus 190 ~~~~~~liNG~~~~~-----------------------------~~~~~--------~~~~~l~v~~G~~~rlRliN~~~ 232 (577)
.....+.|||+.+.. |+.+. .....+.++.|++++|.|.|.+.
T Consensus 357 ~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~ 436 (552)
T 1aoz_A 357 NGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANM 436 (552)
T ss_dssp TTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCC
T ss_pred CCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcc
Confidence 001246788875421 00000 01135889999999999999875
Q ss_pred -----CCcEEEEEcCceeEEEEe-CCcc----------cCceEEeEEEECCCceEEEEEEeCCCCCCceEEEEeeec
Q 008109 233 -----NDDLFFSIANHTLTVVEV-DAVY----------VKPFETETLVITPGQTTNVLLETKPHYPSATFFMTARPY 293 (577)
Q Consensus 233 -----~~~~~~~i~gh~~~via~-DG~~----------v~P~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~ 293 (577)
...+.||||||.|+|++. +|.+ ..|...|++.|.+|+.+.|.++++++ |.|.++|+-.
T Consensus 437 ~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNP---G~W~~HCHi~ 510 (552)
T 1aoz_A 437 MKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNP---GVWAFHCHIE 510 (552)
T ss_dssp SSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSC---EEEEEEESSH
T ss_pred cccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcCCC---eEEEEEeeeh
Confidence 346889999999999998 4553 25889999999999999999999998 9999999963
No 65
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.48 E-value=2.3e-13 Score=115.93 Aligned_cols=105 Identities=16% Similarity=0.149 Sum_probs=81.1
Q ss_pred EEEEEEEEEEEe-----ccCceeeEE-EEECCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCc
Q 008109 30 RHYKFNVELKNV-----TRLCHTKTL-VSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYI 103 (577)
Q Consensus 30 ~~~~l~~~~~~~-----~~~g~~~~~-~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 103 (577)
++|.+.+.+... ...|..... .+||++++++.|++++||+|+++++|.... +||+..+.. |+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~~----~~--- 69 (112)
T 1iby_A 2 HNFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDAF----GV--- 69 (112)
T ss_dssp CCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGGG----TE---
T ss_pred CceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcCC----Cc---
Confidence 345555555433 234555555 589999999999999999999999999865 566665422 22
Q ss_pred cccccCCCCeEEEEEEECCCceeeEEecccccccccceEeEEEeC
Q 008109 104 TQCPIQTGQSYIYNFTIVGQRGTLWWHAHISWLRSTLYGPIIILP 148 (577)
Q Consensus 104 tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 148 (577)
+..+.||++++|.|++ +++|+||||||.+....+|.|.|+|.+
T Consensus 70 -~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~~M~g~i~V~~ 112 (112)
T 1iby_A 70 -QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKNIHLPGTLNVVE 112 (112)
T ss_dssp -EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTTBCCEEEEEEC
T ss_pred -eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCchHHCEEEEEEeC
Confidence 3679999999999996 899999999998876666999999974
No 66
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.47 E-value=1.2e-12 Score=138.67 Aligned_cols=213 Identities=14% Similarity=0.093 Sum_probs=144.8
Q ss_pred eeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CceeeeE--cc---eeccCCCCCCCCCC-----ccccccCCCCeE
Q 008109 46 HTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQ-HNISIHW--HG---IRQLRSGWADGPAY-----ITQCPIQTGQSY 114 (577)
Q Consensus 46 ~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~--HG---~~~~~~~~~DGv~~-----~tq~~i~PG~~~ 114 (577)
.....+++||+. .|+|+|++| ++|+||.|... ....+|+ +| ..+.... .||.+- +....|.|||++
T Consensus 167 ~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via-~DG~~~~~P~~~~~l~l~pgeR~ 243 (448)
T 3aw5_A 167 FLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIA-VDQGFLARPIEVRALFLAPAERA 243 (448)
T ss_dssp CCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEE-ETTEEEEEEEEESCEEECTTCEE
T ss_pred ccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEE-eCCCccCCceEeceEEECCcceE
Confidence 345788999996 599999999 99999999985 5688999 77 4433222 788541 345678999999
Q ss_pred EEEEEECCCceeeEEeccccccccc----c----------eEeE--EEeCCCCCCCC--C---C----CCCCeeeEEeec
Q 008109 115 IYNFTIVGQRGTLWWHAHISWLRST----L----------YGPI--IILPKRGIPYP--F---A----KPYKEVPIVFGE 169 (577)
Q Consensus 115 ~Y~~~~~~~~Gt~wYH~H~~~~~~G----l----------~G~l--iV~~~~~~~~~--~---~----~~~~e~~l~~~d 169 (577)
+..+++ . .|.||..++......| + ...+ .+........| + + ....+..+.+..
T Consensus 244 dvlv~~-~-~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~L~~lp~~~~~~~~~~~~~l~~ 321 (448)
T 3aw5_A 244 EVVVEL-G-EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPPEPPKPTRTRRFALSL 321 (448)
T ss_dssp EEEEEE-C-SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCCCCCCSCCCCCCCCCSEEEEEEEEE
T ss_pred EEEEEC-C-CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCCccccCCCCCCCCCCCceEEEEEeC
Confidence 999998 4 5789998875321100 1 1112 22111110000 0 0 001111111110
Q ss_pred cccccHHHHHHHhhhCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEE-EecCCEEEEEEEecCCCCcEEEEEcCceeEEE
Q 008109 170 WFKSDTEAIINQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLK-VKSGKTYLLRLVNSALNDDLFFSIANHTLTVV 248 (577)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~-v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi 248 (577)
+ ...+.|||+.+.. ..+.+. ++.|++++|+|.|.+....+.||||||.|+|+
T Consensus 322 ----------------~-----~~~~~iNg~~~~~------~~p~~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl 374 (448)
T 3aw5_A 322 ----------------S-----GMQWTINGMFWNA------SNPLFEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWII 374 (448)
T ss_dssp ----------------E-----TTEEEETTBCCCT------TCTTCCCEEECEEEEEEEEECSSSCCEEEEESSSCBEEE
T ss_pred ----------------C-----CceeeECCCcCCC------CCCceeccCCCCeEEEEEEcCCCCCCcCEEECCceEEEE
Confidence 0 1258899998642 234567 89999999999999844567899999999999
Q ss_pred EeCCccc------------Cc---eEEeEEEECCCceEEEEEEeC---CCCCCceEEEEeeec
Q 008109 249 EVDAVYV------------KP---FETETLVITPGQTTNVLLETK---PHYPSATFFMTARPY 293 (577)
Q Consensus 249 a~DG~~v------------~P---~~~d~l~l~pgeR~dv~v~~~---~~~~~g~y~l~~~~~ 293 (577)
+.+|... .| ..+|++.|.||+++.+.+++. .. ..|.++|+-.
T Consensus 375 ~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~ad---npw~~HCHil 434 (448)
T 3aw5_A 375 ERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRG---QLFPFHCHNL 434 (448)
T ss_dssp EEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTT---CEEEEEESSH
T ss_pred EecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCC---CcEEEEcCCh
Confidence 9999764 23 589999999999999998887 54 2399999853
No 67
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.46 E-value=1e-11 Score=135.23 Aligned_cols=241 Identities=11% Similarity=0.064 Sum_probs=148.7
Q ss_pred eEEEEECCCCC--------CCeEEEecCCEEEEEEEeCCC-CceeeeEcceeccCCCCCCCCC----CccccccCCCCeE
Q 008109 48 KTLVSVNGQFP--------GPRIVAREGDRLLIKVVNHVQ-HNISIHWHGIRQLRSGWADGPA----YITQCPIQTGQSY 114 (577)
Q Consensus 48 ~~~~~~ng~~p--------gP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~PG~~~ 114 (577)
...+++||+.. -|+|.|++|+++|+||.|... ....+|++|..+.... .||.+ .+....|.|||++
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIA-ADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEe-cCCcccCceEeCeEEEccEEEE
Confidence 46789999973 379999999999999999985 4678999988665433 78865 2445679999999
Q ss_pred EEEEEECCCceeeEEeccc--cc---cc-ccc-eEeEEEeCCCCCCCCCCC----CC----Ce---eeEEeeccccccHH
Q 008109 115 IYNFTIVGQRGTLWWHAHI--SW---LR-STL-YGPIIILPKRGIPYPFAK----PY----KE---VPIVFGEWFKSDTE 176 (577)
Q Consensus 115 ~Y~~~~~~~~Gt~wYH~H~--~~---~~-~Gl-~G~liV~~~~~~~~~~~~----~~----~e---~~l~~~d~~~~~~~ 176 (577)
+..+++.+.+|.||..... .. .. ... .+.|-...... ..|... .+ .+ .++.-.+.-.....
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~-~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~ 352 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPG-GLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFV 352 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCC-SCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCC-CCCCCCCCcCCCcccccccccccCCCCCCCCcccc
Confidence 9999985568999998875 21 11 111 22222222211 111100 00 00 00000000000000
Q ss_pred -HHHHH-hhhCCCCCCCCCeEEEcCcCCCCCCCCC-------------CceeEEEEecCCEEEEEEEecCC----CCcEE
Q 008109 177 -AIINQ-ALQTGGGPNVSDAYTFNGLPGPLYNCSA-------------KDTFKLKVKSGKTYLLRLVNSAL----NDDLF 237 (577)
Q Consensus 177 -~~~~~-~~~~~~~~~~~~~~liNG~~~~~~~~~~-------------~~~~~l~v~~G~~~rlRliN~~~----~~~~~ 237 (577)
..... .+...........+.|||+.+....... .....+.++.++.+++.++|... ...+.
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP 432 (559)
T 2q9o_A 353 KRPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHP 432 (559)
T ss_dssp CCGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEE
T ss_pred cceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCc
Confidence 00000 0000000112246889999863210000 01235778777666666666643 56788
Q ss_pred EEEcCceeEEEEeCC---------cc------------cCceEEeEEEECCCceEEEEEEeCCCCCCceEEEEeeec
Q 008109 238 FSIANHTLTVVEVDA---------VY------------VKPFETETLVITPGQTTNVLLETKPHYPSATFFMTARPY 293 (577)
Q Consensus 238 ~~i~gh~~~via~DG---------~~------------v~P~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~ 293 (577)
||||||.|+|++.++ +. ..|..+|++.|.+|+++.|.|+++++ |.|.++|+-.
T Consensus 433 ~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNP---G~W~~HCHil 506 (559)
T 2q9o_A 433 MHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNP---GAWLFHCHIA 506 (559)
T ss_dssp EEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSC---EEEEEEECCH
T ss_pred EEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCC---eeEEEEecch
Confidence 999999999999986 32 14778999999999999999999998 9999999964
No 68
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.42 E-value=1e-11 Score=135.53 Aligned_cols=231 Identities=13% Similarity=0.093 Sum_probs=146.0
Q ss_pred eeEEEEECCCCCCCeEEEecCCEEEEEEEeCC-CCceeeeEcce---------eccCCCCCCCCCC-----cc------c
Q 008109 47 TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHV-QHNISIHWHGI---------RQLRSGWADGPAY-----IT------Q 105 (577)
Q Consensus 47 ~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l-~~~~~iH~HG~---------~~~~~~~~DGv~~-----~t------q 105 (577)
....+++||+. .|.|.|++| ++|+||.|.. .....+++.|. .+.. .||.+- ++ .
T Consensus 253 ~gd~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa---~DG~~l~~P~~~~~~~~~~~ 327 (612)
T 2g23_A 253 FGPYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIG---SDGGLLPRPVPVDFDDTLPV 327 (612)
T ss_dssp CCSEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEE---ETTEEEEEEEEECSSSSSSS
T ss_pred cCCEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEE---eCCeEccCCEEecccCcccE
Confidence 34678999996 599999999 9999999998 45677888664 2322 788531 33 5
Q ss_pred cccCCCCeEEEEEEECCCce-eeEEeccccccccc-----------ceEeEEEeCCCC-CCCCCCCC-------------
Q 008109 106 CPIQTGQSYIYNFTIVGQRG-TLWWHAHISWLRST-----------LYGPIIILPKRG-IPYPFAKP------------- 159 (577)
Q Consensus 106 ~~i~PG~~~~Y~~~~~~~~G-t~wYH~H~~~~~~G-----------l~G~liV~~~~~-~~~~~~~~------------- 159 (577)
..|.|||+++.-+++.+.+| +++..........| ..--|.|..+.. .....+..
T Consensus 328 l~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~ 407 (612)
T 2g23_A 328 LSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIP 407 (612)
T ss_dssp EEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSC
T ss_pred EEECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccc
Confidence 67999999999999865566 47766543211111 111244544321 11111100
Q ss_pred CCeeeEEee------------cccccc--HHHHHHHhhhCC-----CCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecC
Q 008109 160 YKEVPIVFG------------EWFKSD--TEAIINQALQTG-----GGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSG 220 (577)
Q Consensus 160 ~~e~~l~~~------------d~~~~~--~~~~~~~~~~~~-----~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G 220 (577)
.....+++. -|.... ..... .....+ ........+.|||+.+. ..+.++++.|
T Consensus 408 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~iNG~~~~-------~~~~~~v~~G 479 (612)
T 2g23_A 408 HGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADV-QVPAEGVIQVTGADGRTKTYRRTAATFN-------DGLGFTIGEG 479 (612)
T ss_dssp CEEEEEEECCTTCTTSTTCCCEEEEEEEC------CCSCTTEEEEECTTSCEEEEEEEECSTT-------SCCCEEEETT
T ss_pred cceeEEeeccccccccccccceeecccccccccc-ccccccceeeeccCCceeEEEECCccCC-------CCCceEecCC
Confidence 001122221 010000 00000 000000 00001135889999763 3567999999
Q ss_pred CEEEEEEEecCCCCcEEEEEcCceeEEEEeCCc------------------------cc---CceEEeEEEECCCceEEE
Q 008109 221 KTYLLRLVNSALNDDLFFSIANHTLTVVEVDAV------------------------YV---KPFETETLVITPGQTTNV 273 (577)
Q Consensus 221 ~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~------------------------~v---~P~~~d~l~l~pgeR~dv 273 (577)
++++|+|+|.+ ...+.||||||.|+|++.+|. .. ++..+|++.|.||+++.|
T Consensus 480 ~~v~w~l~N~~-~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i 558 (612)
T 2g23_A 480 THEQWTFLNLS-PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRV 558 (612)
T ss_dssp CEEEEEEEECS-SSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEE
T ss_pred CEEEEEEEeCC-CCCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEE
Confidence 99999999998 456789999999999987542 11 234789999999999999
Q ss_pred EEEeC-CCCCCceEEEEeeecc
Q 008109 274 LLETK-PHYPSATFFMTARPYV 294 (577)
Q Consensus 274 ~v~~~-~~~~~g~y~l~~~~~~ 294 (577)
.++++ .+ |.|.++|+...
T Consensus 559 ~~~~~~~p---G~w~~HCHil~ 577 (612)
T 2g23_A 559 MGKFDGAY---GRFMYHCHLLE 577 (612)
T ss_dssp EEECCSCC---EEEEEEESSHH
T ss_pred EEEeCCCC---ccEEEEeCchh
Confidence 99999 66 99999999643
No 69
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.40 E-value=1.1e-12 Score=117.68 Aligned_cols=99 Identities=14% Similarity=0.156 Sum_probs=72.0
Q ss_pred CceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCC------CCCcc-ccccCCCC--eE
Q 008109 44 LCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADG------PAYIT-QCPIQTGQ--SY 114 (577)
Q Consensus 44 ~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG------v~~~t-q~~i~PG~--~~ 114 (577)
.+.....+.++|. ++|+|+|++||+|+|+++|... ...|.+.+...+..+.+. .++.. ...|.||+ +.
T Consensus 46 ~~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~ 122 (154)
T 2cal_A 46 PGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYT 122 (154)
T ss_dssp TTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEE
T ss_pred cCCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEE
Confidence 3444445566766 6799999999999999999743 346777776554443221 00000 02689999 99
Q ss_pred EEEEEECCCceeeEEeccccccc-ccceEeEEEe
Q 008109 115 IYNFTIVGQRGTLWWHAHISWLR-STLYGPIIIL 147 (577)
Q Consensus 115 ~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~ 147 (577)
+|+|++ ++|+||||||..++. +||+|.|+|+
T Consensus 123 t~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 123 DFTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 999994 899999999987776 8999999985
No 70
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.33 E-value=4.7e-12 Score=136.67 Aligned_cols=218 Identities=10% Similarity=0.059 Sum_probs=139.2
Q ss_pred eeEEEEECCCCCCCeEEEecCCEEEEEEEeCCCC-ceeeeEcce-eccCCCCCCCCC----C-ccccccCCCCeEEEEEE
Q 008109 47 TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQH-NISIHWHGI-RQLRSGWADGPA----Y-ITQCPIQTGQSYIYNFT 119 (577)
Q Consensus 47 ~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~-~~~iH~HG~-~~~~~~~~DGv~----~-~tq~~i~PG~~~~Y~~~ 119 (577)
....+++||+. .|.|.++.| ++|+||.|.... ...+|+.|. .+.-.. .||.+ . +....|.|||+++..++
T Consensus 229 ~~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~via-~DG~~~~~P~~~~~l~l~pgeR~dvlv~ 305 (513)
T 2wsd_A 229 CGETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQIG-SDGGLLPRSVKLNSFSLAPAERYDIIID 305 (513)
T ss_dssp CCSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEEEE-ETTEEEEEEEEESEEEECTTCEEEEEEE
T ss_pred ccceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEEEc-cCCCcccCceEeCeEEECCeeeEEEEEE
Confidence 34778999996 599999885 999999999854 578998877 443322 78843 1 44567999999999999
Q ss_pred ECCCceeeEE-ecccc--ccc-ccc-eEeEEEeCCC--CCC--CCCCCCC------------CeeeEEeeccccccHHHH
Q 008109 120 IVGQRGTLWW-HAHIS--WLR-STL-YGPIIILPKR--GIP--YPFAKPY------------KEVPIVFGEWFKSDTEAI 178 (577)
Q Consensus 120 ~~~~~Gt~wY-H~H~~--~~~-~Gl-~G~liV~~~~--~~~--~~~~~~~------------~e~~l~~~d~~~~~~~~~ 178 (577)
+.+.+|.++. ..-.. +.. .+. ...+-..... ... ...+... .+..+.+...
T Consensus 306 ~~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~-------- 377 (513)
T 2wsd_A 306 FTAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGT-------- 377 (513)
T ss_dssp CGGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEE--------
T ss_pred CCCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEee--------
Confidence 8544676333 21111 000 011 1222222111 000 0000000 0111111100
Q ss_pred HHHhhhCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEeCCc-----
Q 008109 179 INQALQTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAV----- 253 (577)
Q Consensus 179 ~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~----- 253 (577)
........++|||+.+. ....+.++.|++++|+|.|.+. ..+.||||||.|+|++.+|.
T Consensus 378 --------~~~~g~~~~~iNg~~~~-------~~~~~~~~~g~~~~w~l~N~~~-~~HP~HlHG~~F~Vl~~~~~~~~~~ 441 (513)
T 2wsd_A 378 --------QDEYGRPVLLLNNKRWH-------DPVTETPKVGTTEIWSIINPTR-GTHPIHLHLVSFRVLDRRPFDIARY 441 (513)
T ss_dssp --------ECTTSCEEEEETTBCTT-------SCCCBCCBTTCEEEEEEEECSS-SCEEEEESSCCEEEEEEEEBCHHHH
T ss_pred --------cCCCCCceEeECCccCC-------CcccEecCCCCEEEEEEEcCCC-CCcCEeEeCceEEEEEecCcccccc
Confidence 00001135679999863 2245689999999999999884 46689999999999998762
Q ss_pred -----------cc-----CceEEeEEEECCCceEEEEEEeC-CCCCCceEEEEeeecc
Q 008109 254 -----------YV-----KPFETETLVITPGQTTNVLLETK-PHYPSATFFMTARPYV 294 (577)
Q Consensus 254 -----------~v-----~P~~~d~l~l~pgeR~dv~v~~~-~~~~~g~y~l~~~~~~ 294 (577)
+. ++..+|++.|.||+++.|.++++ .+ |.|.++|+-..
T Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnp---G~w~~HCHil~ 496 (513)
T 2wsd_A 442 QESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYS---GRYVWHCHALE 496 (513)
T ss_dssp HHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCC---EEEEEEESCHH
T ss_pred cccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCC---CCEEEEcCChh
Confidence 00 23579999999999999999995 45 99999999643
No 71
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.32 E-value=2.1e-11 Score=131.78 Aligned_cols=230 Identities=12% Similarity=0.070 Sum_probs=140.0
Q ss_pred eEEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CceeeeEcc-------eeccCCCCCCCCC-----CccccccCCCCeE
Q 008109 48 KTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQ-HNISIHWHG-------IRQLRSGWADGPA-----YITQCPIQTGQSY 114 (577)
Q Consensus 48 ~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG-------~~~~~~~~~DGv~-----~~tq~~i~PG~~~ 114 (577)
...+++||+. .|.|.|+.| ++|+||.|... ....++++| ..+... ..||.. .++...|.|||++
T Consensus 201 gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vI-a~DG~~~~~P~~~~~l~l~pgeR~ 277 (534)
T 3abg_A 201 GDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVI-ASDSGLLEHPADTSLLYISMAERY 277 (534)
T ss_dssp CSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEE-EETTEEEEEEEEESCEEECTTCEE
T ss_pred CceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccEEEE-EeCCCcccCceEeceEEECCccEE
Confidence 5678999985 699999985 99999999985 456888865 322221 178852 2456789999999
Q ss_pred EEEEEECCCce-eeEEecccccc--------cccceEeEEEeCCCCCCCCCCCCCCeeeEEeeccccccHHHHHHHhhhC
Q 008109 115 IYNFTIVGQRG-TLWWHAHISWL--------RSTLYGPIIILPKRGIPYPFAKPYKEVPIVFGEWFKSDTEAIINQALQT 185 (577)
Q Consensus 115 ~Y~~~~~~~~G-t~wYH~H~~~~--------~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~ 185 (577)
+..+++.+.+| +||........ .....+.+-.........+. ....+..+.................-
T Consensus 278 dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~---~~~~P~~L~~~~~p~~~~~~~~~~~~ 354 (534)
T 3abg_A 278 EVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD---TSVVPANLRDVPFPSPTTNTPRQFRF 354 (534)
T ss_dssp EEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSC---CCCCCCCCCCCSCCCCCCCCCEEEEC
T ss_pred EEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCC---CCCCccccccCCCCCCccccceEEEE
Confidence 99999855477 68876532110 00111222222111100000 00000000000000000000000000
Q ss_pred CCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEe-CCc---ccCc---e
Q 008109 186 GGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEV-DAV---YVKP---F 258 (577)
Q Consensus 186 ~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~-DG~---~v~P---~ 258 (577)
+. ....++|||+.+... .....+.++.|++++|.|.|.+....+.||||||.|+|++. +|. ...+ .
T Consensus 355 ~~---~~~~w~iNG~~f~~~----~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~~ 427 (534)
T 3abg_A 355 GR---TGPTWTINGVAFADV----QNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESG 427 (534)
T ss_dssp SC---CCSTTCCCCBTTBCT----TSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCSGGGS
T ss_pred ec---cCceeEECCcccCCC----CCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCccccC
Confidence 00 113467999976321 01234689999999999999986556789999999999998 663 1112 4
Q ss_pred EEeEEEECCCceEEEEEE-eCCCCCCceEEEEeeec
Q 008109 259 ETETLVITPGQTTNVLLE-TKPHYPSATFFMTARPY 293 (577)
Q Consensus 259 ~~d~l~l~pgeR~dv~v~-~~~~~~~g~y~l~~~~~ 293 (577)
.+|++.|.||+++.|.+. ++++ |.|.++|+-.
T Consensus 428 ~rDTV~v~pg~~v~I~~~~adnp---G~w~~HCHil 460 (534)
T 3abg_A 428 LKDVVWLGRRETVVVEAHYAPFP---GVYMFHCHNL 460 (534)
T ss_dssp CBSEECCCSSEEEEEEEECCSCC---EEEEEEESCH
T ss_pred CcCeEEcCCCCEEEEEEEECCCC---ccEEEecChH
Confidence 689999999999999998 6777 9999999964
No 72
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.30 E-value=5.9e-12 Score=135.31 Aligned_cols=96 Identities=19% Similarity=0.239 Sum_probs=77.0
Q ss_pred CceeeEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccccccCCCCeEEEEEEECCC
Q 008109 44 LCHTKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQ 123 (577)
Q Consensus 44 ~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~~ 123 (577)
+++...++++|+++++|.|++++||+|+++|+|.+...-. +||+.++. .|+ +..|.||++++|+|++ ++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv----~~~i~PG~t~t~~Fta-~~ 565 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV----AMEIGPQMTSSVTFVA-AN 565 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE----EEEECTTCEEEEEEEC-CS
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc----ceeeCCCCeEEEEEEC-CC
Confidence 4578889999999999999999999999999998753222 47776653 233 2679999999999997 89
Q ss_pred ceeeEEeccc-ccc-cccceEeEEEeCCC
Q 008109 124 RGTLWWHAHI-SWL-RSTLYGPIIILPKR 150 (577)
Q Consensus 124 ~Gt~wYH~H~-~~~-~~Gl~G~liV~~~~ 150 (577)
+|+||||||. .+. -.||.|.|+|++++
T Consensus 566 pGtY~yhC~e~Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC-
T ss_pred CEEEEEECCCCCCCCccCCEEEEEEEcCC
Confidence 9999999993 221 15999999999764
No 73
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.24 E-value=4.1e-11 Score=100.49 Aligned_cols=79 Identities=18% Similarity=0.286 Sum_probs=63.8
Q ss_pred CCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccccccCCCCeEEEEEEECCCceeeEEeccc
Q 008109 54 NGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHI 133 (577)
Q Consensus 54 ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~ 133 (577)
+..+..+.|++++||+|++ +|..+.++++|+++. +||.....+..|.||++++|+| +++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~~--~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVTW--INREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEEE--EECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 4455568999999999655 699888999998852 3565555556799999999888 579999999998
Q ss_pred ccccccceEeEEEe
Q 008109 134 SWLRSTLYGPIIIL 147 (577)
Q Consensus 134 ~~~~~Gl~G~liV~ 147 (577)
|. ||.|.|+|+
T Consensus 95 H~---gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP---FMRGKVVVE 105 (105)
T ss_dssp CT---TCEEEEEEC
T ss_pred CC---CCEEEEEEC
Confidence 75 999999985
No 74
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.20 E-value=2.7e-09 Score=115.67 Aligned_cols=238 Identities=9% Similarity=0.014 Sum_probs=145.8
Q ss_pred eEEEEECCCCC----------------CCeEEEecCCEEEEEEEeCCC-CceeeeEcceeccCCCCCCCCC----Ccccc
Q 008109 48 KTLVSVNGQFP----------------GPRIVAREGDRLLIKVVNHVQ-HNISIHWHGIRQLRSGWADGPA----YITQC 106 (577)
Q Consensus 48 ~~~~~~ng~~p----------------gP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~----~~tq~ 106 (577)
....++||+.. .++|.|++|+++|+||.|... ....+|++|..+.... .||++ .+...
T Consensus 225 ~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa-~DG~~v~P~~~~~l 303 (580)
T 3sqr_A 225 LENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIA-NDLVPIVPYTTDTL 303 (580)
T ss_dssp BSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESSE
T ss_pred CceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEE-eCCccCCceEeeEE
Confidence 35678999742 379999999999999999985 4568899888765433 78864 13456
Q ss_pred ccCCCCeEEEEEEECCCceeeEEecccccc-----cccceEeEEEeCCCCCCCCCCCCCCeee-EEeec--cccccH--H
Q 008109 107 PIQTGQSYIYNFTIVGQRGTLWWHAHISWL-----RSTLYGPIIILPKRGIPYPFAKPYKEVP-IVFGE--WFKSDT--E 176 (577)
Q Consensus 107 ~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~-----~~Gl~G~liV~~~~~~~~~~~~~~~e~~-l~~~d--~~~~~~--~ 176 (577)
.|.|||+++..+++.+.+|.||........ ..+..-+++.........|.... .+.. ..+.+ ...... .
T Consensus 304 ~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~~-~~~~~~~~~~~~~~L~P~~~~ 382 (580)
T 3sqr_A 304 LIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVG-TTPRGTCEDEPVASLVPHLAL 382 (580)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCCCCCC-CCCCCCSCCSCGGGCCBSSCC
T ss_pred EEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCCCCCC-CCccchhhcccccccccCCCC
Confidence 799999999999986678999999876421 11122233333222111111000 0000 00000 000000 0
Q ss_pred HHHHH-----hhhCCCCCCCCCeEEEcCcCCCCC-C---------CCC---CceeEEEE----ecCCEEEEEEEecCC-C
Q 008109 177 AIINQ-----ALQTGGGPNVSDAYTFNGLPGPLY-N---------CSA---KDTFKLKV----KSGKTYLLRLVNSAL-N 233 (577)
Q Consensus 177 ~~~~~-----~~~~~~~~~~~~~~liNG~~~~~~-~---------~~~---~~~~~l~v----~~G~~~rlRliN~~~-~ 233 (577)
..... .+..+ ....-.+.|||..+..- . .+. ...-.+.+ +.|+++.|.|-|.+. .
T Consensus 383 ~~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~~ 460 (580)
T 3sqr_A 383 DVGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGFG 460 (580)
T ss_dssp BCCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSSC
T ss_pred CCCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCccc
Confidence 00000 00000 00113467898875310 0 000 01112344 459999999999872 2
Q ss_pred CcEEEEEcCceeEEEEeCCc------------ccCceEEeEEEECCCceEEEEEEeCCCCCCceEEEEeee
Q 008109 234 DDLFFSIANHTLTVVEVDAV------------YVKPFETETLVITPGQTTNVLLETKPHYPSATFFMTARP 292 (577)
Q Consensus 234 ~~~~~~i~gh~~~via~DG~------------~v~P~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~ 292 (577)
..+.||||||.|+|++.+.+ +..|...|++.|.|++.+.+.+++++| |.|.++|+-
T Consensus 461 ~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNP---G~W~~HCHi 528 (580)
T 3sqr_A 461 IWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNP---GSWLLHCHI 528 (580)
T ss_dssp CCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSC---EEEEEEECS
T ss_pred cceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCC---eeeEEEECc
Confidence 46789999999999998432 225889999999999999999999999 999999985
No 75
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.16 E-value=5.1e-11 Score=105.43 Aligned_cols=95 Identities=17% Similarity=0.176 Sum_probs=71.8
Q ss_pred eEEEecCCCEEEEEEeeCCCCCCC-CCceeecCCceEEEE------eccC---cCCCCCCCCCCCCCCCCeeeeEEeCCC
Q 008109 453 KLVVLPFNTSVELIMQDTSILGAE-NHPLHLHGYNFFVVG------QGFG---NFDPNKDPAKFNLVDPIERNTVGVPSG 522 (577)
Q Consensus 453 ~~~~~~~g~~v~~~l~N~~~~~~~-~HP~HlHG~~F~Vl~------~g~g---~~~~~~~~~~~~~~~p~~rDTv~vp~~ 522 (577)
..+.++.|++|+|++.|.+ .. .|.||+|+....+.. ...+ .|.+.. ....++||..|.||
T Consensus 35 ~~i~v~~G~~V~~~~~N~~---~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~-------~~~~~~~t~~l~pG 104 (139)
T 2aan_A 35 TELTVSAGQTVTIRFKNNS---AVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPAD-------KSNIIAESPLANGN 104 (139)
T ss_dssp SEEEECTTCEEEEEEECCC---SSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSC-------CTTEEEECCCBCTT
T ss_pred CeEEECCCCEEEEEEEeCC---CCCCeeEEEeccccccchhhhhhhhcccccccccCcc-------cccccccccccCCC
Confidence 3568899999999999964 35 899999986431100 0000 111110 12357899999999
Q ss_pred cEEEEEEEecCceeEEEeeechhhhhcccEEEEEEe
Q 008109 523 GWVAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 523 ~~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 558 (577)
+...|.|.+++||.|.||||+..|.+ ||+..|.|+
T Consensus 105 et~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 105 ETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp CEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred CEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 99999999999999999999999999 999999884
No 76
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.11 E-value=1.8e-10 Score=96.59 Aligned_cols=85 Identities=14% Similarity=0.150 Sum_probs=65.5
Q ss_pred eEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEe-
Q 008109 453 KLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLA- 531 (577)
Q Consensus 453 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~a- 531 (577)
+.+.++.|++|+|+ |.. ...|++|+||..+... . |. + .+....++..|.||+...++|.+
T Consensus 19 ~~i~v~~Gd~V~~~--N~~---~~~H~v~~~~~~~~~~--~-g~-~----------~~~~~~~~~~i~pG~~~~~~f~~~ 79 (105)
T 3cvb_A 19 ANVTVHPGDTVKWV--NNK---LPPHNILFDDKQVPGA--S-KE-L----------ADKLSHSQLMFSPGESYEITFSSD 79 (105)
T ss_dssp SEEEECTTEEEEEE--ECS---SCCEEEEECTTSSGGG--C-HH-H----------HHHHCEEEEECSTTCEEEEEECTT
T ss_pred CEEEEcCCCEEEEE--ECC---CCCCeEEEeCCCCCcc--c-cc-c----------cccccccccccCCCCeEEEEEecC
Confidence 45789999999874 643 4789999999866321 0 00 0 00112578999999999999998
Q ss_pred cCceeEEEeeechhhhhcccEEEEEEe
Q 008109 532 DNPGVWFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 532 dnpG~w~~HCHil~H~d~GM~~~~~V~ 558 (577)
+.||.|.|||| .|...||+..|.|+
T Consensus 80 ~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 80 FPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp SCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 79999999999 79999999999985
No 77
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=99.03 E-value=5.6e-10 Score=93.75 Aligned_cols=83 Identities=13% Similarity=0.155 Sum_probs=61.2
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCC----CccccccCCCCeEEEEEEECCCceeeEEeccccc
Q 008109 60 PRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPA----YITQCPIQTGQSYIYNFTIVGQRGTLWWHAHISW 135 (577)
Q Consensus 60 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~ 135 (577)
+.|++++||+|++ +|....++++|+|+...+. .+|.. ..+...+.||++++|+|+++.++|+|||||| ..
T Consensus 20 ~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-~H 93 (106)
T 2gim_A 20 AKLTIKPGDTVEF--LNNKVPPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-PH 93 (106)
T ss_dssp SEEEECTTCEEEE--EECSSSCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT-TT
T ss_pred CEEEECCCCEEEE--EECCCCCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC-Ch
Confidence 7999999999755 5887778889888764421 12210 0122458999999999975478999999999 22
Q ss_pred ccccceEeEEEeC
Q 008109 136 LRSTLYGPIIILP 148 (577)
Q Consensus 136 ~~~Gl~G~liV~~ 148 (577)
..+||.|.|+|.+
T Consensus 94 ~~~GM~G~i~V~~ 106 (106)
T 2gim_A 94 RGAGMVGKITVAG 106 (106)
T ss_dssp GGGTCEEEEEECC
T ss_pred hhcCcEEEEEEcC
Confidence 3379999999964
No 78
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=99.00 E-value=2.1e-08 Score=110.90 Aligned_cols=233 Identities=12% Similarity=0.052 Sum_probs=133.6
Q ss_pred eeEEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CceeeeEcc---------eeccCCCCCCCCC-----------Cccc
Q 008109 47 TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQ-HNISIHWHG---------IRQLRSGWADGPA-----------YITQ 105 (577)
Q Consensus 47 ~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG---------~~~~~~~~~DGv~-----------~~tq 105 (577)
....+++||+. -|.+.++. .++|+||.|... ....+.+-| +.+.. .||.. .++.
T Consensus 253 ~gd~~~vNG~~-~p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa---~DG~~l~~Pv~v~~p~~~~~ 327 (612)
T 3gyr_A 253 FGPYTTVNGRI-WPYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIG---SDGGLLPRPVPVDFDDTLPV 327 (612)
T ss_dssp CCSEEEETTEE-SCEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEE---ETTEEEEEEEEECSSSSSSS
T ss_pred cCceeeecCCc-cceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEE---eCCCccccceeccCcccccE
Confidence 34678899986 59998865 589999999973 445555533 23332 68832 1234
Q ss_pred cccCCCCeEEEEEEECCCceeeEEeccccc-cc-------ccc----eEeEEEeCCCCC---CCCCC------C----CC
Q 008109 106 CPIQTGQSYIYNFTIVGQRGTLWWHAHISW-LR-------STL----YGPIIILPKRGI---PYPFA------K----PY 160 (577)
Q Consensus 106 ~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~-~~-------~Gl----~G~liV~~~~~~---~~~~~------~----~~ 160 (577)
..|.||||++..+++.+.+|.+|+-..... .. .+. .-.+.+...... ..+.. . ..
T Consensus 328 l~i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 407 (612)
T 3gyr_A 328 LSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIP 407 (612)
T ss_dssp EEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSC
T ss_pred EEeccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcccccccccccccccccccc
Confidence 679999999999998666666555432211 10 011 111222222110 00000 0 00
Q ss_pred C-eeeEEeeccccccH-------------HHHHHHhh-----hCCCCCCCCCeEEEcCcCCCCCCCCCCceeEEEEecCC
Q 008109 161 K-EVPIVFGEWFKSDT-------------EAIINQAL-----QTGGGPNVSDAYTFNGLPGPLYNCSAKDTFKLKVKSGK 221 (577)
Q Consensus 161 ~-e~~l~~~d~~~~~~-------------~~~~~~~~-----~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~ 221 (577)
. ...+.+..-..... ........ ...........+.+||+.+. ....+.++.|+
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-------~~~~~~~~~g~ 480 (612)
T 3gyr_A 408 HGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTFN-------DGLGFTIGEGT 480 (612)
T ss_dssp CEEEEEEEECTTCTTTTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECSTT-------SCCCEEEETTC
T ss_pred cccccccccccccccccccccccccccccccccccccccceeeeccCCCccccccccCccCC-------CCcceEeCCCC
Confidence 0 01111110000000 00000000 00001112235677877642 34568999999
Q ss_pred EEEEEEEecCCCCcEEEEEcCceeEEEEeCCccc---------------------------CceEEeEEEECCCceEEEE
Q 008109 222 TYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYV---------------------------KPFETETLVITPGQTTNVL 274 (577)
Q Consensus 222 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v---------------------------~P~~~d~l~l~pgeR~dv~ 274 (577)
+++|.|.|.+.. .+.||||||.|+|++.+|... ++..+|++.|.+|+.+.|.
T Consensus 481 ~~~w~i~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~ 559 (612)
T 3gyr_A 481 HEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVM 559 (612)
T ss_dssp EEEEEEEECSSS-CEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEE
T ss_pred EEEEEEEcCCCC-CcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEECCCCEEEEE
Confidence 999999999854 567999999999998876421 2235899999999999999
Q ss_pred EEeCCCCCCceEEEEeeecc
Q 008109 275 LETKPHYPSATFFMTARPYV 294 (577)
Q Consensus 275 v~~~~~~~~g~y~l~~~~~~ 294 (577)
+++...+ |.|.++|+-..
T Consensus 560 ~rfadnp--G~w~~HCHil~ 577 (612)
T 3gyr_A 560 GKFDGAY--GRFMYHCHLLE 577 (612)
T ss_dssp EECCSCC--EEEEEEESSHH
T ss_pred EEeCCCC--cceEEcCCChH
Confidence 9954333 99999999643
No 79
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.97 E-value=2.9e-09 Score=94.05 Aligned_cols=91 Identities=10% Similarity=0.112 Sum_probs=66.4
Q ss_pred CCCCCeEEEecCCEEEEEEEeCCCC-ceeeeEcceecc--------C------CCC-CCCCCC--ccccccCCCCeEEEE
Q 008109 56 QFPGPRIVAREGDRLLIKVVNHVQH-NISIHWHGIRQL--------R------SGW-ADGPAY--ITQCPIQTGQSYIYN 117 (577)
Q Consensus 56 ~~pgP~i~v~~Gd~v~v~l~N~l~~-~~~iH~HG~~~~--------~------~~~-~DGv~~--~tq~~i~PG~~~~Y~ 117 (577)
+|--+.|+|++||+|+++|+|.... +++++.|+.... . ..+ .++.+. -....|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 4434799999999999999999877 899998874310 0 000 001010 011348999999999
Q ss_pred EEECCCceeeEEecccccccccceEeEEEe
Q 008109 118 FTIVGQRGTLWWHAHISWLRSTLYGPIIIL 147 (577)
Q Consensus 118 ~~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~ 147 (577)
|++ +++|+|+||||..++..||.|.|+|.
T Consensus 111 f~~-~~pG~y~f~C~~~~H~~GM~G~i~V~ 139 (139)
T 2aan_A 111 FTA-PAAGTYLYICTVPGHYPLMQGKLVVN 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTSEEEEEEC
T ss_pred EEC-CCCeEEEEEcCCCChHHcCEEEEEEC
Confidence 996 79999999999876555999999984
No 80
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.81 E-value=1.5e-08 Score=83.89 Aligned_cols=79 Identities=10% Similarity=0.070 Sum_probs=62.5
Q ss_pred CCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccccccCCCCeEEEEEEECCCceeeEEeccc
Q 008109 54 NGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHI 133 (577)
Q Consensus 54 ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~ 133 (577)
|..+-...|++++||+|+++++|....++++...+.... ..+.||++.+|.|+. +++|+|.|+|..
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~-------------~~~~pg~~~~~~~t~-~~~G~Y~y~C~~ 87 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGID-------------VVVESGKEKNITVKP-KSAGTYELICRY 87 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTEE-------------EEECTTCEEEEEECC-CSCEEEEEECTT
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCcc-------------eeecCCcceeEEEec-ccCceEEEECcc
Confidence 334434689999999999999999877777666554322 347899999999995 899999999975
Q ss_pred ccccccceEeEEEe
Q 008109 134 SWLRSTLYGPIIIL 147 (577)
Q Consensus 134 ~~~~~Gl~G~liV~ 147 (577)
|. ..||.|.|+|+
T Consensus 88 H~-~~gM~G~i~Ve 100 (100)
T 4hci_A 88 HL-LKGMEGKVIVK 100 (100)
T ss_dssp TG-GGTCEEEEEEC
T ss_pred cc-CCCCEEEEEEC
Confidence 32 26999999995
No 81
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.81 E-value=9.8e-09 Score=86.03 Aligned_cols=85 Identities=13% Similarity=0.163 Sum_probs=62.9
Q ss_pred eEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEe-
Q 008109 453 KLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLA- 531 (577)
Q Consensus 453 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~a- 531 (577)
..+.++.|++|+|+ |.+ ...|+||+|+..+.. . .|. + . ....+|++.+.||+...+.|.+
T Consensus 20 ~~i~v~~Gd~V~~~--n~~---~~~H~~~~~~~~~~~-~--~g~-~------~----~~~~~~~~~~~pG~~~~~~f~~~ 80 (106)
T 2gim_A 20 AKLTIKPGDTVEFL--NNK---VPPHNVVFDAALNPA-K--SAD-L------A----KSLSHKQLLMSPGQSTSTTFPAD 80 (106)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCCCBEECSSSSTT-C--CHH-H------H----HHHCBCSCCCSTTCEEEEECCTT
T ss_pred CEEEECCCCEEEEE--ECC---CCCceEEEeCCCCcc-c--ccc-c------c----hhccccceeeCCCCEEEEEEecC
Confidence 35688999999986 543 368999999864310 0 000 0 0 0011467789999999998888
Q ss_pred cCceeEEEeeechhhhhcccEEEEEEe
Q 008109 532 DNPGVWFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 532 dnpG~w~~HCHil~H~d~GM~~~~~V~ 558 (577)
+.||.|.|||| .|.+.||...|.|+
T Consensus 81 ~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 81 APAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp CCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 89999999999 89999999999985
No 82
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.80 E-value=2.3e-08 Score=88.35 Aligned_cols=91 Identities=13% Similarity=0.137 Sum_probs=65.1
Q ss_pred CCCCeEEEecCCEEEEEEEe--CCCCceeeeEccee------------ccCC-CC---CCCCCC-ccccccCCCCeEEEE
Q 008109 57 FPGPRIVAREGDRLLIKVVN--HVQHNISIHWHGIR------------QLRS-GW---ADGPAY-ITQCPIQTGQSYIYN 117 (577)
Q Consensus 57 ~pgP~i~v~~Gd~v~v~l~N--~l~~~~~iH~HG~~------------~~~~-~~---~DGv~~-~tq~~i~PG~~~~Y~ 117 (577)
+-.+.|+|++||+|+++++| .....++++.+... .... .+ .|.... -.-..|.||++.++.
T Consensus 30 F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~ 109 (140)
T 1qhq_A 30 FAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVT 109 (140)
T ss_dssp BSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEE
T ss_pred EeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEE
Confidence 33479999999999999999 66788888887321 0000 00 010000 001358999999999
Q ss_pred EEECCCceeeEEeccccccc-ccceEeEEEeC
Q 008109 118 FTIVGQRGTLWWHAHISWLR-STLYGPIIILP 148 (577)
Q Consensus 118 ~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~ 148 (577)
|++ +.+|+|||||+..+.. .||.|.|+|.+
T Consensus 110 ~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 110 FRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 997 8899999999986665 79999999974
No 83
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.71 E-value=1.8e-08 Score=83.03 Aligned_cols=80 Identities=14% Similarity=0.184 Sum_probs=58.0
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCC-CCCccccccCCCCeEEEEEEECCCceeeEEecccccccc
Q 008109 60 PRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADG-PAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHISWLRS 138 (577)
Q Consensus 60 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG-v~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~ 138 (577)
+.|++++||+|+ ++|....++++|+|+...+.. .|. ....+...+.||++++++|+ ++|+|+|||+.| ..+
T Consensus 18 ~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p~~--~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~~H-~~~ 89 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNAGFPHNIVFDEDAIPSG--VNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCEPH-QGA 89 (98)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECGGGSCTT--CCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECGGG-GGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCCCc--cccccccccceecCCCCEEEEEeC---CCeEEEEEcCCc-ccc
Confidence 789999999865 589887899999998643211 110 00011245899999999874 799999999932 337
Q ss_pred cceEeEEEe
Q 008109 139 TLYGPIIIL 147 (577)
Q Consensus 139 Gl~G~liV~ 147 (577)
||.|.|+|+
T Consensus 90 gM~G~i~V~ 98 (98)
T 2plt_A 90 GMVGKIIVQ 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999984
No 84
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.71 E-value=4e-08 Score=86.74 Aligned_cols=98 Identities=20% Similarity=0.179 Sum_probs=71.1
Q ss_pred EEEecCCCEEEEEEeeCCCCCCCCCceeecCC--ceEEE-Eec--cC---cCCCCCCCCCCCCCCCCeeeeEEeCCCcEE
Q 008109 454 LVVLPFNTSVELIMQDTSILGAENHPLHLHGY--NFFVV-GQG--FG---NFDPNKDPAKFNLVDPIERNTVGVPSGGWV 525 (577)
Q Consensus 454 ~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~--~F~Vl-~~g--~g---~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v 525 (577)
.+.++.|++|+|++.|.+. +.+.|.||++.. .+.-+ ..+ .+ .|-+.. -....+++|..|.+|+..
T Consensus 34 ~i~v~~G~tV~~~~~N~~~-~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~t~~l~pG~~~ 106 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNN-LGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP------DTPNALAWTAMLNAGESG 106 (140)
T ss_dssp EEEEETTCEEEEEEEECCS-SCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT------TCTTEEEECCCBCTTEEE
T ss_pred eEEECCCCEEEEEEECCCC-CCCceeEEEeccCcchhhhhhhhhhhcccccccCcc------ccccccccceeeCCCcee
Confidence 5788999999999999321 347999999853 12100 000 00 011000 011347899999999999
Q ss_pred EEEEEecCceeEEEeeechhhhhcccEEEEEEe
Q 008109 526 AIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 526 ~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 558 (577)
.+.|.++.||.|.|||++..|...||...|.|.
T Consensus 107 ~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 107 SVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 999999999999999999999999999999986
No 85
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.66 E-value=5.8e-08 Score=79.98 Aligned_cols=80 Identities=14% Similarity=0.183 Sum_probs=56.1
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccccccCCCCeEEEEEEECCCceeeEEeccccccccc
Q 008109 60 PRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHISWLRST 139 (577)
Q Consensus 60 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 139 (577)
+.|++++||+|++ +|....+++++.++...++.. .++.. .+...+.||++++++| +++|+|+|||+.| ..+|
T Consensus 19 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg~~-~~~~~-~~~~~~~pG~~~~~tf---~~~G~y~~~C~~H-~~~g 90 (98)
T 1pcs_A 19 STVTIKAGEEVKW--VNNKLSPHNIVFDADGVPADT-AAKLS-HKGLLFAAGESFTSTF---TEPGTYTYYCEPH-RGAG 90 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECCSSSCHHH-HHHHC-EEEEECSTTCEEEEEC---CSCEEEEEECGGG-TTTT
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCCCCccc-ccccc-ccccccCCCCEEEEEc---CCCeEEEEEcCCc-cccC
Confidence 6899999998765 587777888888765322000 00000 1124689999999887 5799999999932 2379
Q ss_pred ceEeEEEe
Q 008109 140 LYGPIIIL 147 (577)
Q Consensus 140 l~G~liV~ 147 (577)
|.|.|+|+
T Consensus 91 M~G~i~V~ 98 (98)
T 1pcs_A 91 MVGKVVVE 98 (98)
T ss_dssp CEEEEEEC
T ss_pred CeEEEEEC
Confidence 99999984
No 86
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.62 E-value=1.1e-07 Score=82.86 Aligned_cols=79 Identities=14% Similarity=0.213 Sum_probs=57.7
Q ss_pred CCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccccccCCCCeEEEEEEECCCceeeEEeccc
Q 008109 54 NGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHI 133 (577)
Q Consensus 54 ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~ 133 (577)
+..+-.+.|++++||+|++ +|....++++++... .+|........+.||++++|+| +++|+|+|||-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~-------~~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCCCceEEEEeCC-------CCCcccccccccCCCCEEEEEc---CCCEEEEEEeCC
Confidence 4455447999999999765 588877777776432 1222222334589999999888 479999999987
Q ss_pred ccccccceEeEEEe
Q 008109 134 SWLRSTLYGPIIIL 147 (577)
Q Consensus 134 ~~~~~Gl~G~liV~ 147 (577)
|. ||.|.|+|+
T Consensus 122 H~---gM~G~I~V~ 132 (132)
T 3c75_A 122 HP---FMRGKVIVE 132 (132)
T ss_dssp CT---TCEEEEEEC
T ss_pred Cc---CCEEEEEEC
Confidence 64 999999985
No 87
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.62 E-value=1.1e-07 Score=77.18 Aligned_cols=74 Identities=16% Similarity=0.237 Sum_probs=55.1
Q ss_pred CCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccccccCCCCeEEEEEEECCCceeeEEecccccccc
Q 008109 59 GPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHISWLRS 138 (577)
Q Consensus 59 gP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~ 138 (577)
.+.|++++||+|++ +|....+++++.++.. .+. .....+.||+++++.| +++|+|||||+.|. .+
T Consensus 18 P~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~----~~~-----~~~~~~~~g~~~~~~f---~~~G~y~~~C~~H~-~~ 82 (91)
T 1bxv_A 18 PSTIEIQAGDTVQW--VNNKLAPHNVVVEGQP----ELS-----HKDLAFSPGETFEATF---SEPGTYTYYCEPHR-GA 82 (91)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEETTCG----GGC-----EEEEECSTTCEEEEEC---CSCEEEEEECTTTG-GG
T ss_pred CCEEEECCCCEEEE--EECCCCCcEEEEeCCC----ccC-----cccceeCCCCEEEEEe---CCCEEEEEEeCCCc-cC
Confidence 37899999999765 5877778888888721 000 1124689999988877 57999999999432 35
Q ss_pred cceEeEEEe
Q 008109 139 TLYGPIIIL 147 (577)
Q Consensus 139 Gl~G~liV~ 147 (577)
||.|.|+|+
T Consensus 83 gM~g~i~V~ 91 (91)
T 1bxv_A 83 GMVGKIVVQ 91 (91)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 999999984
No 88
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.60 E-value=6.3e-08 Score=79.77 Aligned_cols=79 Identities=14% Similarity=0.239 Sum_probs=59.4
Q ss_pred EEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEecC
Q 008109 454 LVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLADN 533 (577)
Q Consensus 454 ~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~adn 533 (577)
.+.++.|++|.|+ |.+ ...|.+|+|+..+- +.. .....+|++.+.+|+...+.| +.
T Consensus 20 ~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~p--g~~---------------~~~~~~~~~~~~pG~~~~~tf--~~ 75 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNK---LSPHNIVFDADGVP--ADT---------------AAKLSHKGLLFAAGESFTSTF--TE 75 (98)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEECCSSSC--HHH---------------HHHHCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCcEEEEeCCCCC--ccc---------------cccccccccccCCCCEEEEEc--CC
Confidence 5688999999987 543 36899999874321 000 000125788999999888866 89
Q ss_pred ceeEEEeeechhhhhcccEEEEEEe
Q 008109 534 PGVWFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 534 pG~w~~HCHil~H~d~GM~~~~~V~ 558 (577)
||.|.|||| .|...||...|.|+
T Consensus 76 ~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 76 PGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CeEEEEEcC--CccccCCeEEEEEC
Confidence 999999999 79999999999884
No 89
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.58 E-value=1.7e-07 Score=77.03 Aligned_cols=77 Identities=16% Similarity=0.204 Sum_probs=55.6
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCC--ccccccCCCCeEEEEEEECCCceeeEEeccccccc
Q 008109 60 PRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAY--ITQCPIQTGQSYIYNFTIVGQRGTLWWHAHISWLR 137 (577)
Q Consensus 60 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~--~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~ 137 (577)
+.|++++||+| +++|....+++++.++...+ +|..+ .....+.||+++++.| .++|+|+|||+.| ..
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H-~~ 87 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPAG-----ESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCTPH-RG 87 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCTT-----SCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECSST-TT
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCCc-----cccccccccceecCCCCEEEEEe---CCCeEEEEEccCh-hh
Confidence 68999999985 55687767888888765431 11110 0123589999999877 5799999999932 23
Q ss_pred ccceEeEEEe
Q 008109 138 STLYGPIIIL 147 (577)
Q Consensus 138 ~Gl~G~liV~ 147 (577)
+||.|.|+|+
T Consensus 88 ~gM~G~i~V~ 97 (97)
T 1b3i_A 88 AGMVGTITVE 97 (97)
T ss_dssp TTCEEEEEEC
T ss_pred cCCEEEEEEC
Confidence 6999999984
No 90
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.57 E-value=1.8e-07 Score=77.63 Aligned_cols=77 Identities=13% Similarity=0.140 Sum_probs=54.5
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCC-------CCCCc--cccccCCCCeEEEEEEECCCceeeEEe
Q 008109 60 PRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWAD-------GPAYI--TQCPIQTGQSYIYNFTIVGQRGTLWWH 130 (577)
Q Consensus 60 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~D-------Gv~~~--tq~~i~PG~~~~Y~~~~~~~~Gt~wYH 130 (577)
+.|++++||+|+ ++|....+++++++. +.. .+ ..+++ +...+.||+++++.| .++|+|+||
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~ 86 (102)
T 1kdj_A 17 DSITVSAGEAVE--FTLVGETGHNIVFDI----PAG-APGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFY 86 (102)
T ss_dssp SEEEECTTCCEE--EEECSSSCBCCEECC----CTT-CCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEE
T ss_pred CEEEECCCCEEE--EEECCCCCeEEEEeC----ccc-ccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEE
Confidence 789999999976 558876778887762 110 10 00111 224589999998877 579999999
Q ss_pred cccccccccceEeEEEe
Q 008109 131 AHISWLRSTLYGPIIIL 147 (577)
Q Consensus 131 ~H~~~~~~Gl~G~liV~ 147 (577)
|+ ....+||.|.|+|+
T Consensus 87 C~-~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 87 CT-PHKSANMKGTLTVK 102 (102)
T ss_dssp CS-TTGGGTCEEEEEEC
T ss_pred eC-CCcccCCeEEEEEC
Confidence 99 22337999999984
No 91
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.55 E-value=2.4e-07 Score=76.19 Aligned_cols=80 Identities=14% Similarity=0.224 Sum_probs=59.8
Q ss_pred EEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEecC
Q 008109 454 LVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLADN 533 (577)
Q Consensus 454 ~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~adn 533 (577)
.+.++.|++|+| .|.+ ...|.+|+|+..+- ..++. ...++|+..+.+|+...++| +.
T Consensus 19 ~i~v~~G~~V~~--~n~~---~~~H~~~~~~~~~p------~~~~~----------~~~~~~~~~~~pG~~~~~tf--~~ 75 (98)
T 2plt_A 19 TLTIKSGETVNF--VNNA---GFPHNIVFDEDAIP------SGVNA----------DAISRDDYLNAPGETYSVKL--TA 75 (98)
T ss_dssp EEEECTTCEEEE--EECS---SCCEEEEECGGGSC------TTCCH----------HHHCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEE--EECC---CCceEEEEeCCCCC------Ccccc----------ccccccceecCCCCEEEEEe--CC
Confidence 578899999998 4543 36899999975320 00000 01247889999999888865 68
Q ss_pred ceeEEEeeechhhhhcccEEEEEEe
Q 008109 534 PGVWFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 534 pG~w~~HCHil~H~d~GM~~~~~V~ 558 (577)
||.|.|||| .|.+.||...|.|+
T Consensus 76 ~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 76 AGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp CEEEEEECG--GGGGGTCEEEEEEC
T ss_pred CeEEEEEcC--CccccCCeEEEEEC
Confidence 999999999 79999999999884
No 92
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.52 E-value=3.4e-07 Score=78.37 Aligned_cols=75 Identities=12% Similarity=0.180 Sum_probs=52.9
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccccccCCCCeEEEEEEECCCceeeEEeccccccccc
Q 008109 60 PRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHISWLRST 139 (577)
Q Consensus 60 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 139 (577)
..|++++||+|++.++|. + |++......+.+|. ....+.||++++|.| +.+|+|||+|..|. .+|
T Consensus 21 ~~i~V~~GdtV~f~~~~~---~-----H~v~~~~~~~P~g~---~~f~~~pg~t~s~TF---~~pG~y~y~C~~H~-~~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK---S-----HNVEAIKEILPEGV---ESFKSKINESYTLTV---TEPGLYGVKCTPHF-GMG 85 (123)
T ss_dssp SEEEECTTEEEEEEESST---T-----CCCEECTTSSCTTC---CCCBCCTTCCEEEEE---CSCEEEEEECGGGT-TTT
T ss_pred CEEEECCCCEEEEEECCC---C-----ceEEEcCCcCCCCc---cceecCCCCEEEEEe---CCCeEEEEEeCCCC-cCC
Confidence 689999999988877762 3 44433221122342 123467999999888 47999999999432 379
Q ss_pred ceEeEEEeCC
Q 008109 140 LYGPIIILPK 149 (577)
Q Consensus 140 l~G~liV~~~ 149 (577)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 3erx_A 86 MVGLVQVGDA 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999999974
No 93
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.52 E-value=3.4e-07 Score=74.14 Aligned_cols=72 Identities=15% Similarity=0.338 Sum_probs=57.3
Q ss_pred EEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEecC
Q 008109 454 LVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLADN 533 (577)
Q Consensus 454 ~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~adn 533 (577)
.+.++.|++|.|+ |.+ ...|.+|+|+.. +...++..+.+|+...+.| +.
T Consensus 20 ~i~v~~Gd~V~~~--n~~---~~~H~v~~~~~~------------------------~~~~~~~~~~~g~~~~~~f--~~ 68 (91)
T 1bxv_A 20 TIEIQAGDTVQWV--NNK---LAPHNVVVEGQP------------------------ELSHKDLAFSPGETFEATF--SE 68 (91)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEETTCG------------------------GGCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCcEEEEeCCC------------------------ccCcccceeCCCCEEEEEe--CC
Confidence 5688999999987 532 368999988721 0125778899999877765 89
Q ss_pred ceeEEEeeechhhhhcccEEEEEEe
Q 008109 534 PGVWFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 534 pG~w~~HCHil~H~d~GM~~~~~V~ 558 (577)
||.|.|||| .|...||...+.|+
T Consensus 69 ~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 69 PGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CEEEEEEeC--CCccCCCEEEEEEC
Confidence 999999999 89999999999874
No 94
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.51 E-value=4e-07 Score=75.02 Aligned_cols=77 Identities=12% Similarity=0.170 Sum_probs=55.9
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCC------ccccccCCCCeEEEEEEECCCceeeEEeccc
Q 008109 60 PRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAY------ITQCPIQTGQSYIYNFTIVGQRGTLWWHAHI 133 (577)
Q Consensus 60 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~------~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~ 133 (577)
+.|++++||+| +++|....+++++.++... .+|... .....+.||++++++|+ ++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~~ 86 (99)
T 1byp_A 17 SDLSIASGEKI--TFKNNAGFPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCAP 86 (99)
T ss_dssp SEEEECTTEEE--EEEECSSCCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECGG
T ss_pred CEEEECCCCEE--EEEECCCCcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcCC
Confidence 68999999985 5589887788888876432 122210 11135799999988874 79999999993
Q ss_pred ccccccceEeEEEe
Q 008109 134 SWLRSTLYGPIIIL 147 (577)
Q Consensus 134 ~~~~~Gl~G~liV~ 147 (577)
...+||.|.|+|.
T Consensus 87 -H~~~gM~G~i~V~ 99 (99)
T 1byp_A 87 -HAGAGMVGKVTVN 99 (99)
T ss_dssp -GTTTTCEEEEEEC
T ss_pred -ccccCCEEEEEEC
Confidence 2337999999984
No 95
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.50 E-value=2.4e-07 Score=79.76 Aligned_cols=76 Identities=13% Similarity=0.242 Sum_probs=53.2
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccccccCCCCeEEEEEEECCCceeeEEeccccccccc
Q 008109 60 PRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHISWLRST 139 (577)
Q Consensus 60 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 139 (577)
+.|++++||+|++.++|. + |++......+-||.. ...+.||++++|.| +.+|+|||||..| ..+|
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~-----H~v~~~~~~~P~g~~---~f~s~pGet~s~TF---~~pG~y~y~C~~H-~~~G 87 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---G-----HNSALMKGGAPEGAE---TWKGKINEEITVTL---SKPGVYMYQCAPH-VGMG 87 (127)
T ss_dssp SEEEECTTCEEEEECSSS---S-----CCCEECTTCSCTTCC---CCBCCTTCCCEEEC---CSCEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEEEECCC---C-----ceEEEccCcCCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCC-CcCC
Confidence 799999999977766653 3 444332111123321 13457999988888 5799999999854 3479
Q ss_pred ceEeEEEeCCC
Q 008109 140 LYGPIIILPKR 150 (577)
Q Consensus 140 l~G~liV~~~~ 150 (577)
|.|.|+|.++.
T Consensus 88 M~G~I~V~~~~ 98 (127)
T 3tu6_A 88 MIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEESSCT
T ss_pred cEEEEEECcCC
Confidence 99999999864
No 96
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.47 E-value=4.4e-07 Score=74.83 Aligned_cols=77 Identities=9% Similarity=0.154 Sum_probs=55.1
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCC----C--ccccccCCCCeEEEEEEECCCceeeEEeccc
Q 008109 60 PRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPA----Y--ITQCPIQTGQSYIYNFTIVGQRGTLWWHAHI 133 (577)
Q Consensus 60 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~----~--~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~ 133 (577)
+.|++++||+|+ ++|....+++++.++...+ +|.. + .....+.||++++++|+ ++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~p-----~~~~~~~~~~~~~~~~~~~G~~~~~tf~---~~G~y~~~C~~ 86 (99)
T 1plc_A 17 SEFSISPGEKIV--FKNNAGFPHNIVFDEDSIP-----SGVDASKISMSEEDLLNAKGETFEVALS---NKGEYSFYCSP 86 (99)
T ss_dssp SEEEECTTCEEE--EEECSSCCBCCEECTTSSC-----TTCCHHHHCCCTTCCBCSTTCEEEEECC---SCEEEEEECGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCc-----ccccccccccccCccccCCCCEEEEEEC---CCceEEEEcCC
Confidence 689999999865 5888777888877754221 2211 0 01135799999988773 79999999993
Q ss_pred ccccccceEeEEEe
Q 008109 134 SWLRSTLYGPIIIL 147 (577)
Q Consensus 134 ~~~~~Gl~G~liV~ 147 (577)
| ..+||.|.|+|+
T Consensus 87 H-~~~gM~G~i~V~ 99 (99)
T 1plc_A 87 H-QGAGMVGKVTVN 99 (99)
T ss_dssp G-TTTTCEEEEEEC
T ss_pred C-cccCCEEEEEEC
Confidence 2 237999999984
No 97
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.43 E-value=1.8e-07 Score=76.80 Aligned_cols=78 Identities=13% Similarity=0.260 Sum_probs=58.5
Q ss_pred EEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEecC
Q 008109 454 LVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLADN 533 (577)
Q Consensus 454 ~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~adn 533 (577)
.+.++.|++|.|+ |.+ ...|.+++++..+. .+. ....+++..+.+|+...+.| +.
T Consensus 20 ~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~~-----~~~-------------~~~~~~~~~~~~g~~~~~tf--~~ 74 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNK---VGPHNVIFDKVPAG-----ESA-------------PALSNTKLAIAPGSFYSVTL--GT 74 (97)
T ss_dssp EEEECTTCEEEEE--ECS---SCCCCBEEEECCTT-----SCH-------------HHHCBCCCCCSCSCCEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCeEEEEeCCCCc-----ccc-------------ccccccceecCCCCEEEEEe--CC
Confidence 5688999999887 543 36899999875440 000 00114677888998887766 89
Q ss_pred ceeEEEeeechhhhhcccEEEEEEe
Q 008109 534 PGVWFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 534 pG~w~~HCHil~H~d~GM~~~~~V~ 558 (577)
||.|.|||+ .|.++||...|.|+
T Consensus 75 ~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 75 PGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp CSEEEEECS--STTTTTCEEEEEEC
T ss_pred CeEEEEEcc--ChhhcCCEEEEEEC
Confidence 999999999 89999999999884
No 98
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.43 E-value=5.2e-07 Score=77.10 Aligned_cols=76 Identities=8% Similarity=0.031 Sum_probs=53.0
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccccccCCCCeEEEEEEECCCceeeEEeccccccccc
Q 008109 60 PRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHISWLRST 139 (577)
Q Consensus 60 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 139 (577)
..|++++||+|++. |.. .++++..+... +.+|. ....+.||++++|.| +.+|+|+|||-.| ..+|
T Consensus 22 ~~i~V~~GDTV~f~--n~~-~~Hnv~~~~~~-----~p~g~---~~~~~~pg~t~s~TF---~~~G~y~Y~C~~H-~~~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTVKFV--PTD-KSHNAESVREV-----WPEGV---APVKGGFSKEVVFNA---EKEGLYVLKCAPH-YGMG 86 (124)
T ss_dssp SEEEECTTCEEEEE--CSS-SSCCCEECTTT-----SCTTS---CCCBCCTTCCEEEEC---CSSEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEEE--ECC-CCccEEEeCCc-----CCCCc---cccccCCCCEEEEEe---CCCeEEEEEcCCC-CcCC
Confidence 79999999997655 553 56666554221 12232 123467999999888 4799999999743 2379
Q ss_pred ceEeEEEeCCC
Q 008109 140 LYGPIIILPKR 150 (577)
Q Consensus 140 l~G~liV~~~~ 150 (577)
|.|.|+|.++.
T Consensus 87 M~G~I~V~~p~ 97 (124)
T 3ef4_A 87 MVVLVQVGKPV 97 (124)
T ss_dssp CEEEEEESSCT
T ss_pred CEEEEEECCCC
Confidence 99999998753
No 99
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.38 E-value=1.5e-06 Score=73.39 Aligned_cols=75 Identities=17% Similarity=0.320 Sum_probs=58.3
Q ss_pred eEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEec
Q 008109 453 KLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLAD 532 (577)
Q Consensus 453 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~ad 532 (577)
+.+.++.|+.|+|++.|... ..|-|++... .-+..+.||+...+.|.++
T Consensus 38 ~~i~v~~G~~V~~~~~n~d~---~~H~~~i~~~----------------------------~~~~~i~pG~~~~~~f~~~ 86 (112)
T 1iby_A 38 ETLVVKKGDAVKVVVENKSP---ISEGFSIDAF----------------------------GVQEVIKAGETKTISFTAD 86 (112)
T ss_dssp CEEEEETTCEEEEEEEECSS---SCEEEEEGGG----------------------------TEEEEECTTCEEEEEEECC
T ss_pred CEEEEeCCCEEEEEEEECCC---CeEEEEEcCC----------------------------CceeEeCCCCEEEEEEECC
Confidence 35789999999999999642 3444443321 0156799999999999999
Q ss_pred CceeEEEeeechhhhhcccEEEEEEec
Q 008109 533 NPGVWFMHCHLEVHTSWGLKTAWLVLD 559 (577)
Q Consensus 533 npG~w~~HCHil~H~d~GM~~~~~V~~ 559 (577)
.||.|.||||+..|... |...+.|++
T Consensus 87 ~~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 87 KAGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp SCEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred CCEEEEEECCCCCchHH-CEEEEEEeC
Confidence 99999999999887654 999998863
No 100
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.36 E-value=1.3e-06 Score=71.93 Aligned_cols=82 Identities=12% Similarity=0.170 Sum_probs=58.6
Q ss_pred EEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEecC
Q 008109 454 LVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLADN 533 (577)
Q Consensus 454 ~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~adn 533 (577)
.+.++.|++|+| .|.+ ...|.+|+++..|- . + ++. ... ...+|++.+.+|+...+.| +.
T Consensus 18 ~i~v~~G~tV~~--~n~~---~~~H~~~~~~~~~p---~--g-~~~----~~~----~~~~~~~~~~~G~~~~~~f--~~ 76 (99)
T 1byp_A 18 DLSIASGEKITF--KNNA---GFPHNDLFDKKEVP---A--G-VDV----TKI----SMPEEDLLNAPGEEYSVTL--TE 76 (99)
T ss_dssp EEEECTTEEEEE--EECS---SCCBCCEECTTSSC---T--T-CCH----HHH----SCCTTCCBCSTTCEEEEEE--CS
T ss_pred EEEECCCCEEEE--EECC---CCcceEEEeCCCCc---c--c-ccc----ccc----cccccceeeCCCCEEEEEe--CC
Confidence 568899999988 4543 36899999985430 0 0 000 000 1125667889999888766 69
Q ss_pred ceeEEEeeechhhhhcccEEEEEEe
Q 008109 534 PGVWFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 534 pG~w~~HCHil~H~d~GM~~~~~V~ 558 (577)
||.|.|||+ .|.+.||...|.|+
T Consensus 77 ~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 77 KGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CcEEEEEcC--CccccCCEEEEEEC
Confidence 999999999 79999999999884
No 101
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.34 E-value=1.3e-06 Score=75.29 Aligned_cols=89 Identities=9% Similarity=0.001 Sum_probs=59.8
Q ss_pred CeEEEecC-CEEEEEEEeCCCCc-----eeee--Ecceec-------cCCCCCC----CCCC-c-cccccCCCCeEEEEE
Q 008109 60 PRIVAREG-DRLLIKVVNHVQHN-----ISIH--WHGIRQ-------LRSGWAD----GPAY-I-TQCPIQTGQSYIYNF 118 (577)
Q Consensus 60 P~i~v~~G-d~v~v~l~N~l~~~-----~~iH--~HG~~~-------~~~~~~D----Gv~~-~-tq~~i~PG~~~~Y~~ 118 (577)
..|.|++| |+|+|+|+|....+ +++- -+|... .....++ +-+. + ....|.||++.++.|
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~svtf 97 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVKF 97 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEEEE
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEEEEE
Confidence 58999999 99999999987543 3332 222110 0000001 1010 0 113589999999999
Q ss_pred EEC--CCceeeEEecccccccccceEeEEEeC
Q 008109 119 TIV--GQRGTLWWHAHISWLRSTLYGPIIILP 148 (577)
Q Consensus 119 ~~~--~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 148 (577)
+++ .++|+|||.|-..+++.||.|.|+|.+
T Consensus 98 ~~~~~~~~G~Y~f~C~~pgH~~~M~G~i~V~~ 129 (129)
T 1cuo_A 98 KVSALSKDEAYTYFCSYPGHFSMMRGTLKLEE 129 (129)
T ss_dssp EGGGCCTTSCEEEECCSTTCTTTSEEEEEEEC
T ss_pred eccccCCCceEEEEeCCCCchHcCEEEEEEeC
Confidence 973 389999999988777779999999964
No 102
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.31 E-value=3.1e-06 Score=70.63 Aligned_cols=77 Identities=14% Similarity=0.223 Sum_probs=53.6
Q ss_pred CCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccccccCCCCeEEEEEEECCCceeeEEeccccc
Q 008109 56 QFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHISW 135 (577)
Q Consensus 56 ~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~ 135 (577)
.+--..|++++||+|++ .|....++++...... .|........+.||+++++.| +.+|+|+|+|-.|.
T Consensus 30 ~F~P~~i~V~~G~tV~~--~N~d~~~H~v~~~~~~-------~~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~H~ 97 (106)
T 1id2_A 30 KYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP 97 (106)
T ss_dssp EESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT
T ss_pred EEeCCEEEECCCCEEEE--EECCCCcEEEEEeCCC-------CCcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC
Confidence 44337999999999765 4887666665544321 111111113578999999888 47999999998864
Q ss_pred ccccceEeEEEe
Q 008109 136 LRSTLYGPIIIL 147 (577)
Q Consensus 136 ~~~Gl~G~liV~ 147 (577)
||.|.|+|+
T Consensus 98 ---~M~G~I~V~ 106 (106)
T 1id2_A 98 ---FMRGKVIVE 106 (106)
T ss_dssp ---TCEEEEEEC
T ss_pred ---CCEEEEEEC
Confidence 999999984
No 103
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.30 E-value=2.6e-06 Score=70.22 Aligned_cols=72 Identities=21% Similarity=0.392 Sum_probs=58.2
Q ss_pred EEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEecC
Q 008109 454 LVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLADN 533 (577)
Q Consensus 454 ~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~adn 533 (577)
.+.++.|++|+|++.|.+ ...|.|.+.+..+ ...+.||....+.|.++.
T Consensus 29 ~i~v~~G~tV~~~~~n~d---~~~H~~~~~~~~~----------------------------~~~~~pg~~~~~~~t~~~ 77 (100)
T 4hci_A 29 VITIPINESTTLLLKNKG---KSEHTFTIKKLGI----------------------------DVVVESGKEKNITVKPKS 77 (100)
T ss_dssp EEEECTTSCEEEEEEECS---SSCEEEEEGGGTE----------------------------EEEECTTCEEEEEECCCS
T ss_pred EEEECCCCEEEEEEEcCC---CceEEEEEecCCc----------------------------ceeecCCcceeEEEeccc
Confidence 478999999999999964 3567666544322 234788999999999999
Q ss_pred ceeEEEeeechhhhhcccEEEEEEe
Q 008109 534 PGVWFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 534 pG~w~~HCHil~H~d~GM~~~~~V~ 558 (577)
||.|.|+|. .|...||.+.+.|+
T Consensus 78 ~G~Y~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 78 AGTYELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CceEEEECc--cccCCCCEEEEEEC
Confidence 999999996 59999999999884
No 104
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.26 E-value=3.5e-06 Score=72.11 Aligned_cols=75 Identities=12% Similarity=0.156 Sum_probs=49.7
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccccccCCCCeEEEEEEECCCceeeEEeccccccccc
Q 008109 60 PRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHISWLRST 139 (577)
Q Consensus 60 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 139 (577)
+.|++++||+|++ +|... ++++..+ .....||... ....||++++|.| +.+|+|+|+|..|. .+|
T Consensus 21 ~~i~V~~GdtV~f--~~~~~-~H~v~~~-----~~~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H~-~~g 85 (123)
T 1paz_A 21 AYIKANPGDTVTF--IPVDK-GHNVESI-----KDMIPEGAEK---FKSKINENYVLTV---TQPGAYLVKCTPHY-AMG 85 (123)
T ss_dssp SEEEECTTCEEEE--EESSS-SCCCEEC-----TTCSCTTCCC---CBCCTTCCEEEEC---CSCEEEEEECTTTG-GGT
T ss_pred CEEEECCCCEEEE--EECCC-CeEEEEe-----cccCCCCccc---eecCCCCEEEEEe---CCCEEEEEEeCCcc-cCC
Confidence 7899999999765 45432 4443332 1111233211 2356999988877 47999999997422 379
Q ss_pred ceEeEEEeCC
Q 008109 140 LYGPIIILPK 149 (577)
Q Consensus 140 l~G~liV~~~ 149 (577)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1paz_A 86 MIALIAVGDS 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred CEEEEEEcCC
Confidence 9999999874
No 105
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.24 E-value=1.9e-06 Score=77.36 Aligned_cols=92 Identities=10% Similarity=0.069 Sum_probs=61.2
Q ss_pred CCCCCeEEE-ecCCEEEEEEEeCCCCc-----eeeeE--cceec------cCCCCCCCCC----C-c-cccccCCCCeEE
Q 008109 56 QFPGPRIVA-REGDRLLIKVVNHVQHN-----ISIHW--HGIRQ------LRSGWADGPA----Y-I-TQCPIQTGQSYI 115 (577)
Q Consensus 56 ~~pgP~i~v-~~Gd~v~v~l~N~l~~~-----~~iH~--HG~~~------~~~~~~DGv~----~-~-tq~~i~PG~~~~ 115 (577)
+|--..|.| ++||+|+|+|+|....+ +++-+ +|... .....++-++ . + ....|.||++.+
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~s 133 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESS 133 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred eEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEE
Confidence 443358999 99999999999997653 33322 22100 0000001011 0 0 113589999999
Q ss_pred EEEEECC--CceeeEEecccccccccceEeEEEeC
Q 008109 116 YNFTIVG--QRGTLWWHAHISWLRSTLYGPIIILP 148 (577)
Q Consensus 116 Y~~~~~~--~~Gt~wYH~H~~~~~~Gl~G~liV~~ 148 (577)
+.|++ . ++|+|||+|-..+++.||.|-|+|.+
T Consensus 134 vtf~~-~~lkpG~Y~f~Ct~PgH~~gM~G~i~V~~ 167 (167)
T 3ay2_A 134 LTLDP-AKLADGDYKFACTFPGHGALMNGKVTLVD 167 (167)
T ss_dssp EEECG-GGGTTSCEEEECCSTTGGGTSEEEEEEEC
T ss_pred EEEec-CCCCCcEEEEEcCCCCchhcCEEEEEEeC
Confidence 99986 4 79999999988777779999999963
No 106
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.24 E-value=5.5e-06 Score=68.00 Aligned_cols=77 Identities=12% Similarity=0.096 Sum_probs=53.6
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCC----ccccccCCCCeEEEEEEECCCceeeEEeccccc
Q 008109 60 PRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAY----ITQCPIQTGQSYIYNFTIVGQRGTLWWHAHISW 135 (577)
Q Consensus 60 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~----~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~ 135 (577)
+.|++++||+|++ +|....++++....-. +.+|.-. .+...+.||+++++.| +++|+|+|+|..|.
T Consensus 18 ~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~-----~p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H~ 87 (98)
T 1iuz_A 18 SKISVAAGEAIEF--VNNAGFPHNIVFDEDA-----VPAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEPHA 87 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECTTS-----SCTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTTTG
T ss_pred CEEEECCCCEEEE--EECCCCCEEEEEeCCC-----CccccccccccccccccCCCCEEEEEc---CCCEEEEEEchhhc
Confidence 7999999999655 5876667776655311 1223210 0113589999998887 57999999998632
Q ss_pred ccccceEeEEEe
Q 008109 136 LRSTLYGPIIIL 147 (577)
Q Consensus 136 ~~~Gl~G~liV~ 147 (577)
.+||.|.|+|+
T Consensus 88 -~~gM~G~I~V~ 98 (98)
T 1iuz_A 88 -GAGMKMTITVQ 98 (98)
T ss_dssp -GGTCEEEEEEC
T ss_pred -cCCCEEEEEEC
Confidence 36999999984
No 107
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.21 E-value=3.6e-06 Score=72.06 Aligned_cols=76 Identities=13% Similarity=0.215 Sum_probs=50.6
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccccccCCCCeEEEEEEECCCceeeEEeccccccccc
Q 008109 60 PRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHISWLRST 139 (577)
Q Consensus 60 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 139 (577)
+.|++++||+|++ +|... ++++..+ ...+.||.. ...+.||++++|.| +.+|+|+|+|..|. .+|
T Consensus 21 ~~i~V~~GdtV~f--~n~~~-~H~v~~~-----~~~~p~~~~---~~~~~pG~t~~~tF---~~~G~y~y~C~~H~-~~g 85 (123)
T 1pmy_A 21 ALVRLKPGDSIKF--LPTDK-GHNVETI-----KGMAPDGAD---YVKTTVGQEAVVKF---DKEGVYGFKCAPHY-MMG 85 (123)
T ss_dssp SEEEECTTCEEEE--ECSSS-SCCCEEC-----TTSSCTTCC---CCBCCTTSCEEEEC---CSCEEEEEECSTTT-TTT
T ss_pred CEEEECCCCEEEE--EECCC-CcEEEEe-----cccCCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCcc-ccC
Confidence 7899999999654 55533 4443332 111123321 12457999988887 47999999997422 379
Q ss_pred ceEeEEEeCCC
Q 008109 140 LYGPIIILPKR 150 (577)
Q Consensus 140 l~G~liV~~~~ 150 (577)
|.|.|+|.++.
T Consensus 86 M~G~I~V~~~~ 96 (123)
T 1pmy_A 86 MVALVVVGDKR 96 (123)
T ss_dssp CEEEEEESSCC
T ss_pred CEEEEEEcCCC
Confidence 99999998753
No 108
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.19 E-value=2.6e-06 Score=70.46 Aligned_cols=86 Identities=14% Similarity=0.149 Sum_probs=57.8
Q ss_pred eEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEec
Q 008109 453 KLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLAD 532 (577)
Q Consensus 453 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~ad 532 (577)
..+.++.|++|+|+ |.+ ...|.++++.-... .+.|... ........+++.+.+|+...+.| +
T Consensus 17 ~~i~v~~G~tV~~~--n~~---~~~H~~~~~~~~~~-----~~~~~~~------~~~~~~~~~~~~~~pG~~~~~tf--~ 78 (102)
T 1kdj_A 17 DSITVSAGEAVEFT--LVG---ETGHNIVFDIPAGA-----PGTVASE------LKAASMDENDLLSEDEPSFKAKV--S 78 (102)
T ss_dssp SEEEECTTCCEEEE--ECS---SSCBCCEECCCTTC-----CHHHHHH------HHHTSCCTTCCBBTTBCEEEECC--C
T ss_pred CEEEECCCCEEEEE--ECC---CCCeEEEEeCcccc-----cccccch------hhcccccccceecCCCCEEEEEe--C
Confidence 35788999999987 543 36899998731100 0000000 00001123667789999888766 8
Q ss_pred CceeEEEeeechhhhhcccEEEEEEe
Q 008109 533 NPGVWFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 533 npG~w~~HCHil~H~d~GM~~~~~V~ 558 (577)
.||.|.|||+ .|.+.||...|.|+
T Consensus 79 ~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 79 TPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp SCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred CCeEEEEEeC--CCcccCCeEEEEEC
Confidence 9999999999 99999999999884
No 109
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=98.13 E-value=1.1e-05 Score=84.96 Aligned_cols=91 Identities=18% Similarity=0.292 Sum_probs=65.1
Q ss_pred eEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccccccCCCCeEEEEEEECCCceee
Q 008109 48 KTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTL 127 (577)
Q Consensus 48 ~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~~~Gt~ 127 (577)
..+...+-.+-.+.|+|++||+|++.|+|.....-.+ ||..++. -|+ ..-+.||++.++.|++ +++|+|
T Consensus 546 V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDVi--HSF~IPs----lGI----K~DaiPGrtnsvtFta-dkPGvY 614 (638)
T 3sbq_A 546 VYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVS--HGFVVVN----HGV----SMEISPQQTSSITFVA-DKPGLH 614 (638)
T ss_dssp EEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCC--EEEEETT----TTE----EEEECTTCEEEEEEEC-CSCEEE
T ss_pred EEEEEEcccccCCEEEEecCceeEEEEecCCcCCCce--eeeEecC----CCc----eeeeCCCCeEEEEEEc-CCCEEE
Confidence 3445556666667999999999999999974221122 3444332 121 1358899999999996 999999
Q ss_pred EEeccccc-c-cccceEeEEEeCC
Q 008109 128 WWHAHISW-L-RSTLYGPIIILPK 149 (577)
Q Consensus 128 wYH~H~~~-~-~~Gl~G~liV~~~ 149 (577)
||+|.... . -.+|.|.|+|+++
T Consensus 615 ~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 615 WYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp EEECCSCCSTTCTTCEEEEEEECC
T ss_pred EEECCCcCCCCcccceEEEEEecC
Confidence 99998632 2 2789999999874
No 110
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.13 E-value=1.2e-05 Score=69.26 Aligned_cols=88 Identities=13% Similarity=0.077 Sum_probs=58.3
Q ss_pred CeEEE-ecCCEEEEEEEeCCCCc-----eeeeE--cceec-------cCCCCCCCCC----C-c-cccccCCCCeEEEEE
Q 008109 60 PRIVA-REGDRLLIKVVNHVQHN-----ISIHW--HGIRQ-------LRSGWADGPA----Y-I-TQCPIQTGQSYIYNF 118 (577)
Q Consensus 60 P~i~v-~~Gd~v~v~l~N~l~~~-----~~iH~--HG~~~-------~~~~~~DGv~----~-~-tq~~i~PG~~~~Y~~ 118 (577)
..|.| ++||+|+|+|+|....+ +++-+ +|... .....+|=++ . + ....|.||++.+..|
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~svtf 97 (129)
T 2ccw_A 18 KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVTF 97 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred ceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEEEEE
Confidence 58999 99999999999997543 44332 22100 0000011011 0 0 112579999999999
Q ss_pred EECC--Ccee-eEEecccccccccceEeEEEeC
Q 008109 119 TIVG--QRGT-LWWHAHISWLRSTLYGPIIILP 148 (577)
Q Consensus 119 ~~~~--~~Gt-~wYH~H~~~~~~Gl~G~liV~~ 148 (577)
+. . .+|+ |||.|...+++.||.|.|+|.+
T Consensus 98 ~~-~~l~~G~~Y~f~C~~pgH~~gM~G~i~V~~ 129 (129)
T 2ccw_A 98 DV-SKIAAGENYAYFCSFPGHWAMMKGTLKLGS 129 (129)
T ss_dssp EG-GGSCTTCCEEEECCSTTGGGTSEEEEEECC
T ss_pred ec-cccCCCceEEEEeCCCChhHcCEEEEEEeC
Confidence 97 4 5655 9999988777779999999963
No 111
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=98.12 E-value=1.4e-05 Score=68.69 Aligned_cols=92 Identities=14% Similarity=0.132 Sum_probs=60.8
Q ss_pred CCCCCeEEE-ecCCEEEEEEEeCCCCc-----eeeeEcc-----------eec----cCCCCCCCCCCccccccCCCCeE
Q 008109 56 QFPGPRIVA-REGDRLLIKVVNHVQHN-----ISIHWHG-----------IRQ----LRSGWADGPAYITQCPIQTGQSY 114 (577)
Q Consensus 56 ~~pgP~i~v-~~Gd~v~v~l~N~l~~~-----~~iH~HG-----------~~~----~~~~~~DGv~~~tq~~i~PG~~~ 114 (577)
+|--..|.| +.|++|+|+|+|....+ +++-+=. +.. ......|..--.....|.||++.
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~ 92 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETD 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEE
Confidence 343368999 99999999999997654 4443221 000 00000111000011257999999
Q ss_pred EEEEEECC--Ccee-eEEecccccccccceEeEEEeC
Q 008109 115 IYNFTIVG--QRGT-LWWHAHISWLRSTLYGPIIILP 148 (577)
Q Consensus 115 ~Y~~~~~~--~~Gt-~wYH~H~~~~~~Gl~G~liV~~ 148 (577)
++.|+. . ++|+ |+|.|...+++.||.|.|+|.+
T Consensus 93 ~vtf~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~~ 128 (128)
T 2iaa_C 93 SVTFDV-SKLKEGEDYAFFCSFPGHWSIMKGTIELGS 128 (128)
T ss_dssp EEEEES-SCCCTTCCEEEECCSTTCTTTSEEEEEECC
T ss_pred EEEEec-cccCCCceEEEEECCCChhHCCEEEEEEeC
Confidence 999996 4 6885 9999998887779999999963
No 112
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=98.07 E-value=1.7e-05 Score=68.12 Aligned_cols=91 Identities=11% Similarity=0.053 Sum_probs=59.7
Q ss_pred CCCCCeEEE-ecCCEEEEEEEeCCCCc-----eeeeE--cceec-------cCCCCCCCCC----C-c-cccccCCCCeE
Q 008109 56 QFPGPRIVA-REGDRLLIKVVNHVQHN-----ISIHW--HGIRQ-------LRSGWADGPA----Y-I-TQCPIQTGQSY 114 (577)
Q Consensus 56 ~~pgP~i~v-~~Gd~v~v~l~N~l~~~-----~~iH~--HG~~~-------~~~~~~DGv~----~-~-tq~~i~PG~~~ 114 (577)
+|--..|.| ++||+|+|+|+|....+ +++-+ .|... .....+|=++ . + ....|.||++.
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 343368999 99999999999997553 44433 22110 0000011011 0 0 01248999999
Q ss_pred EEEEEECC--Ccee-eEEecccccccccceEeEEEe
Q 008109 115 IYNFTIVG--QRGT-LWWHAHISWLRSTLYGPIIIL 147 (577)
Q Consensus 115 ~Y~~~~~~--~~Gt-~wYH~H~~~~~~Gl~G~liV~ 147 (577)
++.|+. . .+|+ |||.|...+++.||.|.|+|.
T Consensus 94 svtf~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 128 (128)
T 1nwp_A 94 SVTFDV-SKLAAGEKYGFFCSFPGHISMMKGTVTLK 128 (128)
T ss_dssp EEEEEG-GGSCTTSCEEEECCSTTCGGGSEEEEEEC
T ss_pred EEEEec-cccCCCceEEEEECCCChhHCCEEEEEEC
Confidence 999997 4 5776 999999877777999999984
No 113
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=98.07 E-value=1.2e-05 Score=68.75 Aligned_cols=74 Identities=11% Similarity=0.119 Sum_probs=50.9
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccccccCCCCeEEEEEEECCCceeeEEeccccccccc
Q 008109 60 PRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHISWLRST 139 (577)
Q Consensus 60 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 139 (577)
+.|++++||+|++ .|... .++++... ..+.+|.. ...+.||++++|.| +++|+|+|+|..|..
T Consensus 21 ~~i~V~~GdtV~f--~n~d~-~H~v~~~~-----~~~p~~~~---~~~~~~g~t~~~tF---~~~G~y~y~C~~H~~--- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVTF--IPTDK-GHNVETIK-----GMIPDGAE---AFKSKINENYKVTF---TAPGVYGVKCTPHPF--- 83 (122)
T ss_dssp SEEEECTTEEEEE--EESSS-SCCCEECT-----TCSCTTCC---CCBCCTTCCEEEEE---CSCEEEEEEETTEEE---
T ss_pred CEEEECCCCEEEE--EECCC-CcEEEEcc-----cccCCCcc---eeecCCCCEEEEEe---CCCEEEEEEeCCCcc---
Confidence 7899999998655 56543 44444332 11123321 13457999998888 479999999988654
Q ss_pred ceEeEEEeCCC
Q 008109 140 LYGPIIILPKR 150 (577)
Q Consensus 140 l~G~liV~~~~ 150 (577)
|.|.|+|.+..
T Consensus 84 M~G~I~V~~~p 94 (122)
T 2ux6_A 84 MVGVVQVGDAP 94 (122)
T ss_dssp EEEEEEESSSC
T ss_pred CEEEEEEeCCC
Confidence 99999998743
No 114
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.03 E-value=7.7e-06 Score=67.22 Aligned_cols=83 Identities=12% Similarity=0.161 Sum_probs=57.7
Q ss_pred eEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEec
Q 008109 453 KLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLAD 532 (577)
Q Consensus 453 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~ad 532 (577)
..+.++.|++|+| .|.+ ...|.++++...+- .+. + ... ....++.+.+.+|+...+.| +
T Consensus 17 ~~i~v~~G~tV~~--~n~~---~~~H~v~~~~~~~p---~~~---~------~~~--~~~~~~~~~~~~G~~~~~tf--~ 75 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNA---GFPHNIVFDEDSIP---SGV---D------ASK--ISMSEEDLLNAKGETFEVAL--S 75 (99)
T ss_dssp SEEEECTTCEEEE--EECS---SCCBCCEECTTSSC---TTC---C------HHH--HCCCTTCCBCSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEE--EECC---CCceEEEEeCCCCc---ccc---c------ccc--cccccCccccCCCCEEEEEE--C
Confidence 3578899999988 4543 36899998875320 000 0 000 00123556788999877765 6
Q ss_pred CceeEEEeeechhhhhcccEEEEEEe
Q 008109 533 NPGVWFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 533 npG~w~~HCHil~H~d~GM~~~~~V~ 558 (577)
.||.|.|||+ .|..+||...+.|+
T Consensus 76 ~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 76 NKGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCceEEEEcC--CCcccCCEEEEEEC
Confidence 9999999999 79999999999884
No 115
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.94 E-value=2.3e-05 Score=69.91 Aligned_cols=89 Identities=16% Similarity=0.334 Sum_probs=61.0
Q ss_pred eEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCee---eeEEeCCCc--EEEE
Q 008109 453 KLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIER---NTVGVPSGG--WVAI 527 (577)
Q Consensus 453 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~r---DTv~vp~~~--~v~i 527 (577)
+.+.++.|++|.+++.|.+ +...|-|-++.. + ..+... + ...+... -+..|.||+ ...+
T Consensus 61 p~i~V~~GD~V~~~~tN~~--~~~~H~~~i~~~-------~-~~~~~~--~----~~~~~~~~~~~~~~i~PG~sgt~t~ 124 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTN--KGFGHSFDITKK-------G-PPYAVM--P----VIDPIVAGTGFSPVPKDGKFGYTDF 124 (154)
T ss_dssp CEEEECTTCEEEEEEEECC--TTCCCCCEEESC-------C-SCCCSS--C----CCCSEEEEBCCCCCCBTTBEEEEEE
T ss_pred CEEEEeCCCEEEEEEEcCC--CCeeeEEEEeec-------C-cchhcc--c----cccccccccccccccCCCCceEEEE
Confidence 4689999999999999963 135566655532 1 011100 0 0000000 012578999 9999
Q ss_pred EEEecCceeEEEeeechhhhhcccEEEEEEe
Q 008109 528 RFLADNPGVWFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 528 rf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 558 (577)
.|.+ .||.+.||||+.-|...||-..+.|+
T Consensus 125 tft~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 125 TWHP-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EECC-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEE-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 9999 99999999999999999999999873
No 116
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.89 E-value=4.4e-05 Score=82.18 Aligned_cols=79 Identities=18% Similarity=0.331 Sum_probs=63.6
Q ss_pred ceEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEe
Q 008109 452 TKLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLA 531 (577)
Q Consensus 452 ~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~a 531 (577)
.+.+.++.|+.|+|++.|.....+..|.|+++++.+. ..+.||....++|.+
T Consensus 512 pp~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------------------~~i~PG~t~t~~Fta 563 (595)
T 1fwx_A 512 IESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------------------MEIGPQMTSSVTFVA 563 (595)
T ss_dssp CSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEEC
T ss_pred CCEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------------------eeeCCCCeEEEEEEC
Confidence 3467899999999999995422235799988875421 358899999999999
Q ss_pred cCceeEEEeee---chhhhhcccEEEEEEecC
Q 008109 532 DNPGVWFMHCH---LEVHTSWGLKTAWLVLDG 560 (577)
Q Consensus 532 dnpG~w~~HCH---il~H~d~GM~~~~~V~~~ 560 (577)
+.||.|.|||| ...|. ||...+.|++.
T Consensus 564 ~~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p~ 593 (595)
T 1fwx_A 564 ANPGVYWYYCQWFCHALHM--EMRGRMLVEPK 593 (595)
T ss_dssp CSCEEEEEECCSCCSTTCT--TCEEEEEEECC
T ss_pred CCCEEEEEECCCCCCCCcc--CCEEEEEEEcC
Confidence 99999999999 45675 99999999753
No 117
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.82 E-value=7.2e-05 Score=62.06 Aligned_cols=73 Identities=16% Similarity=0.220 Sum_probs=51.1
Q ss_pred eEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEec
Q 008109 453 KLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLAD 532 (577)
Q Consensus 453 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~ad 532 (577)
..+.++.|++|+|+ |.. ...|.+|+|... .|. ..+ ++-.+.+|+...+.| +
T Consensus 33 ~~i~v~~Gd~V~~~--N~d---~~~H~v~~~~~~-------~g~--------------~~~-~~~~~~pG~~~~~tf--~ 83 (105)
T 2ov0_A 33 PELHVKVGDTVTWI--NRE---AMPHNVHFVAGV-------LGE--------------AAL-KGPMMKKEQAYSLTF--T 83 (105)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS--------------SCE-ECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECC---CCCEEEEEcCCC-------CCc--------------ccc-cccccCCCCEEEEEe--C
Confidence 45789999999986 543 368999987521 010 001 122477888766655 8
Q ss_pred CceeEEEeeechhhhhcccEEEEEEe
Q 008109 533 NPGVWFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 533 npG~w~~HCHil~H~d~GM~~~~~V~ 558 (577)
.||.|.|||++ |. ||.+.|.|+
T Consensus 84 ~~G~y~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 84 EAGTYDYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--CC--CCEEEEEEC
Confidence 99999999998 65 999999873
No 118
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.43 E-value=0.00086 Score=56.70 Aligned_cols=86 Identities=9% Similarity=0.078 Sum_probs=54.8
Q ss_pred CCCCeEEEec-CCEEEEEEEeCCCCc-----eeeeE--------c---ceeccCCCCCCCCC----Cc--cccccCCCCe
Q 008109 57 FPGPRIVARE-GDRLLIKVVNHVQHN-----ISIHW--------H---GIRQLRSGWADGPA----YI--TQCPIQTGQS 113 (577)
Q Consensus 57 ~pgP~i~v~~-Gd~v~v~l~N~l~~~-----~~iH~--------H---G~~~~~~~~~DGv~----~~--tq~~i~PG~~ 113 (577)
|--..|.|++ |++|+|+|+|....+ +++=+ | |+..-+. +|=+| .+ ....|.||++
T Consensus 15 F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~--~~y~~~~d~~via~t~~l~pGes 92 (125)
T 3fsa_A 15 FNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLD--KDYLKPDDSRVIAHTKLIGSGEK 92 (125)
T ss_dssp BSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGG--GTTSCTTCTTCCEECCCBCTTCE
T ss_pred EecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChh--hccCCCCCccceeccceeCCCcE
Confidence 3347899986 999999999998542 33222 1 1111000 11121 10 1124799999
Q ss_pred EEEEEEEC--CCceeeEEecccccccccceEeEEEe
Q 008109 114 YIYNFTIV--GQRGTLWWHAHISWLRSTLYGPIIIL 147 (577)
Q Consensus 114 ~~Y~~~~~--~~~Gt~wYH~H~~~~~~Gl~G~liV~ 147 (577)
.+..|+.+ .++|+|.|.|. +++ ||.|.++|.
T Consensus 93 ~~vtf~~~~l~~~G~y~f~C~--gH~-~M~G~v~V~ 125 (125)
T 3fsa_A 93 DSVTFDVSKLKEGEQYMFFCA--AHA-AMKGTLTLK 125 (125)
T ss_dssp EEEEEEGGGC---CCEEEECS--SST-TCEEEEEEC
T ss_pred EEEEEeCcCcCCCccEEEEcC--CCC-CcEEEEEEC
Confidence 99999974 28999999999 444 999999984
No 119
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.27 E-value=0.00049 Score=58.92 Aligned_cols=76 Identities=18% Similarity=0.275 Sum_probs=50.8
Q ss_pred eEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEec
Q 008109 453 KLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLAD 532 (577)
Q Consensus 453 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~ad 532 (577)
..+.++.|++|.|++.| ..|-+..+... + +.. ...+.+.+|+...+. ++
T Consensus 23 ~~i~V~~GDtVtf~n~~------~~H~v~~~~~~----------~-P~g------------~~~f~s~pGet~s~T--F~ 71 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKD------KGHNSALMKGG----------A-PEG------------AETWKGKINEEITVT--LS 71 (127)
T ss_dssp SEEEECTTCEEEEECSS------SSCCCEECTTC----------S-CTT------------CCCCBCCTTCCCEEE--CC
T ss_pred CEEEECCCCEEEEEECC------CCceEEEccCc----------C-CCC------------ccceecCCCCEEEEE--eC
Confidence 35789999999998765 24555543210 0 000 001123467765444 48
Q ss_pred CceeEEEeeechhhhhcccEEEEEEecCC
Q 008109 533 NPGVWFMHCHLEVHTSWGLKTAWLVLDGK 561 (577)
Q Consensus 533 npG~w~~HCHil~H~d~GM~~~~~V~~~~ 561 (577)
.||.|.|||- .|...||...+.|.++.
T Consensus 72 ~pG~y~y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 72 KPGVYMYQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred CCeEEEEEeC--CCCcCCcEEEEEECcCC
Confidence 9999999999 69999999999998754
No 120
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.25 E-value=0.0007 Score=57.60 Aligned_cols=74 Identities=15% Similarity=0.170 Sum_probs=51.5
Q ss_pred EEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEecC
Q 008109 454 LVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLADN 533 (577)
Q Consensus 454 ~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~adn 533 (577)
.++++.|++|+|+..+ ..|-+..+.. .+... .+.+.+.+|+...+.| +.
T Consensus 23 ~i~V~~GDTV~f~n~~------~~Hnv~~~~~----------~~p~g-------------~~~~~~~pg~t~s~TF--~~ 71 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPTD------KSHNAESVRE----------VWPEG-------------VAPVKGGFSKEVVFNA--EK 71 (124)
T ss_dssp EEEECTTCEEEEECSS------SSCCCEECTT----------TSCTT-------------SCCCBCCTTCCEEEEC--CS
T ss_pred EEEECCCCEEEEEECC------CCccEEEeCC----------cCCCC-------------ccccccCCCCEEEEEe--CC
Confidence 5789999999998543 4676665421 11100 0122345777655555 89
Q ss_pred ceeEEEeeechhhhhcccEEEEEEecC
Q 008109 534 PGVWFMHCHLEVHTSWGLKTAWLVLDG 560 (577)
Q Consensus 534 pG~w~~HCHil~H~d~GM~~~~~V~~~ 560 (577)
||.|.|||- .|...||...+.|.++
T Consensus 72 ~G~y~Y~C~--~H~~~GM~G~I~V~~p 96 (124)
T 3ef4_A 72 EGLYVLKCA--PHYGMGMVVLVQVGKP 96 (124)
T ss_dssp SEEEEEECT--TTGGGTCEEEEEESSC
T ss_pred CeEEEEEcC--CCCcCCCEEEEEECCC
Confidence 999999995 8999999999999764
No 121
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.23 E-value=0.00092 Score=56.88 Aligned_cols=74 Identities=15% Similarity=0.219 Sum_probs=51.2
Q ss_pred EEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEecC
Q 008109 454 LVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLADN 533 (577)
Q Consensus 454 ~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~adn 533 (577)
.++++.|++|.|++.| ..|-+..+.. .+ +.. . +.+.+.+|+...+.| +.
T Consensus 22 ~i~V~~GdtV~f~~~~------~~H~v~~~~~----------~~-P~g-~-----------~~f~~~pg~t~s~TF--~~ 70 (123)
T 3erx_A 22 FVRAEPGDVINFVPTD------KSHNVEAIKE----------IL-PEG-V-----------ESFKSKINESYTLTV--TE 70 (123)
T ss_dssp EEEECTTEEEEEEESS------TTCCCEECTT----------SS-CTT-C-----------CCCBCCTTCCEEEEE--CS
T ss_pred EEEECCCCEEEEEECC------CCceEEEcCC----------cC-CCC-c-----------cceecCCCCEEEEEe--CC
Confidence 5789999999999876 2366555421 00 000 0 011245777666555 89
Q ss_pred ceeEEEeeechhhhhcccEEEEEEecC
Q 008109 534 PGVWFMHCHLEVHTSWGLKTAWLVLDG 560 (577)
Q Consensus 534 pG~w~~HCHil~H~d~GM~~~~~V~~~ 560 (577)
||.|.|+|- .|...||...+.|+++
T Consensus 71 pG~y~y~C~--~H~~~GM~G~I~V~~~ 95 (123)
T 3erx_A 71 PGLYGVKCT--PHFGMGMVGLVQVGDA 95 (123)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEESSS
T ss_pred CeEEEEEeC--CCCcCCcEEEEEECCC
Confidence 999999999 8999999999999863
No 122
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.08 E-value=0.002 Score=52.36 Aligned_cols=81 Identities=19% Similarity=0.292 Sum_probs=54.4
Q ss_pred eEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEec
Q 008109 453 KLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLAD 532 (577)
Q Consensus 453 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~ad 532 (577)
..+.++.|++|+|+ |.+ ...|-+.++... +. ...+. .....+...+.+|+...+.| +
T Consensus 18 ~~i~v~~GdtV~~~--n~~---~~~H~v~~~~~~----------~p-----~g~~~-~~~~~~~~~~~~g~~~~~tf--~ 74 (98)
T 1iuz_A 18 SKISVAAGEAIEFV--NNA---GFPHNIVFDEDA----------VP-----AGVDA-DAISYDDYLNSKGETVVRKL--S 74 (98)
T ss_dssp SEEEECTTCEEEEE--ECS---SCCEEEEECTTS----------SC-----TTCCH-HHHCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEEE--ECC---CCCEEEEEeCCC----------Cc-----ccccc-ccccccccccCCCCEEEEEc--C
Confidence 35788999999996 532 256766654311 00 00000 00123456788999877766 8
Q ss_pred CceeEEEeeechhhhhcccEEEEEEe
Q 008109 533 NPGVWFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 533 npG~w~~HCHil~H~d~GM~~~~~V~ 558 (577)
.||.|.|+|-+ |..+||...+.|+
T Consensus 75 ~~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 75 TPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp SCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred CCEEEEEEchh--hccCCCEEEEEEC
Confidence 99999999986 9999999999874
No 123
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.01 E-value=0.0029 Score=52.29 Aligned_cols=73 Identities=15% Similarity=0.143 Sum_probs=49.9
Q ss_pred eEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEec
Q 008109 453 KLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLAD 532 (577)
Q Consensus 453 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~ad 532 (577)
..+.++.|++|+|+ |.+ ...|.+++....- +. ..-++-.+.+|+...+.| +
T Consensus 34 ~~i~V~~G~tV~~~--N~d---~~~H~v~~~~~~~-------~~---------------~~~~s~~l~~g~~~~~tf--~ 84 (106)
T 1id2_A 34 PEVTIKAGETVYWV--NGE---VMPHNVAFKKGIV-------GE---------------DAFRGEMMTKDQAYAITF--N 84 (106)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTTS-------SS---------------SCEECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECC---CCcEEEEEeCCCC-------Cc---------------ccccccccCCCCEEEEEe--C
Confidence 35788999999997 543 2567766543210 00 011333567888777666 8
Q ss_pred CceeEEEeeechhhhhcccEEEEEEe
Q 008109 533 NPGVWFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 533 npG~w~~HCHil~H~d~GM~~~~~V~ 558 (577)
.||.|.|+|-+ |. ||.+.+.|+
T Consensus 85 ~~G~y~~~C~~--H~--~M~G~I~V~ 106 (106)
T 1id2_A 85 EAGSYDYFCTP--HP--FMRGKVIVE 106 (106)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--CC--CCEEEEEEC
Confidence 99999999987 76 999999874
No 124
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.90 E-value=0.0051 Score=53.17 Aligned_cols=74 Identities=14% Similarity=0.231 Sum_probs=54.5
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccccccCCCCeEEEEEEECCCceeeEEeccc-cc-cc
Q 008109 60 PRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHI-SW-LR 137 (577)
Q Consensus 60 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~-~~-~~ 137 (577)
..|.+..|++|++.++|.. . .|+..++.. |. ..-+.||+.-++.|+. +++|+|+|+|.. -+ .-
T Consensus 60 ~~l~Vp~G~~V~~~vts~D-V-----~Hsf~ip~~----~~----k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD-V-----IHGFHVEGT----NI----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS-S-----CEEEEETTS----SC----EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS
T ss_pred CEEEEcCCCEEEEEEEeCC-c-----cceEEecCC----Cc----eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc
Confidence 4799999999999999973 3 345554422 22 1346799999999986 899999999954 12 12
Q ss_pred ccceEeEEEeC
Q 008109 138 STLYGPIIILP 148 (577)
Q Consensus 138 ~Gl~G~liV~~ 148 (577)
++|.|.++|.+
T Consensus 125 ~~M~g~v~V~~ 135 (135)
T 2cua_A 125 QNMFGTIVVKE 135 (135)
T ss_dssp TTCEEEEEEEC
T ss_pred CCCEEEEEEEC
Confidence 68999998863
No 125
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.86 E-value=0.0041 Score=53.61 Aligned_cols=73 Identities=15% Similarity=0.143 Sum_probs=50.6
Q ss_pred eEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEec
Q 008109 453 KLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLAD 532 (577)
Q Consensus 453 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~ad 532 (577)
..+.++.|++|+|+ |.+ ...|-+++.... .|. ..-++-.+.+|+...+.| +
T Consensus 60 ~~i~V~~GdtV~~~--N~d---~~~H~v~~~~~~-------~g~---------------~~~~s~~l~pG~t~~~tF--~ 110 (132)
T 3c75_A 60 PEVTIKAGETVYWV--NGE---VMPHNVAFKKGI-------VGE---------------DAFRGEMMTKDQAYAITF--N 110 (132)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS---------------SCEECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECC---CCceEEEEeCCC-------CCc---------------ccccccccCCCCEEEEEc--C
Confidence 35789999999987 543 357877764321 000 011233567888777666 7
Q ss_pred CceeEEEeeechhhhhcccEEEEEEe
Q 008109 533 NPGVWFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 533 npG~w~~HCHil~H~d~GM~~~~~V~ 558 (577)
.||.|.|||-+ |. ||...+.|+
T Consensus 111 ~~G~y~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 111 EAGSYDYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--Cc--CCEEEEEEC
Confidence 99999999987 76 999999874
No 126
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.82 E-value=0.0081 Score=53.74 Aligned_cols=74 Identities=15% Similarity=0.274 Sum_probs=56.0
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccccccCCCCeEEEEEEECCCceeeEEeccc-cccc-
Q 008109 60 PRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHI-SWLR- 137 (577)
Q Consensus 60 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~-~~~~- 137 (577)
..|.+..|++|++.++|. +.. |+..++.. |+ +.-+.||+.-++.|+. +++|+|++.|.. .+..
T Consensus 93 n~l~VP~G~~Vr~~vTS~-DVi-----Hsf~IP~l----gi----k~da~PG~~n~~~~~~-~kpG~y~g~Cse~CG~~H 157 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP-DVI-----HGFHVEGT----NI----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 157 (168)
T ss_dssp SSEEEETTSEEEEEEECS-SSC-----EEEEETTS----SC----EEEECTTBCEEEEEEC-CSCEEEEEECCSCCSTTG
T ss_pred CEEEEeCCCeEEEEEecC-Cce-----EEEEECCC----Ce----EEEecCCceeEEEEEe-CCCEEEEEECCcCCCCCc
Confidence 689999999999999997 333 44444422 11 1346799999999996 999999999984 4444
Q ss_pred ccceEeEEEeC
Q 008109 138 STLYGPIIILP 148 (577)
Q Consensus 138 ~Gl~G~liV~~ 148 (577)
++|.|-++|++
T Consensus 158 s~M~g~V~V~e 168 (168)
T 3s8f_B 158 QNMFGTIVVKE 168 (168)
T ss_dssp GGCEEEEEEEC
T ss_pred CCCEEEEEEeC
Confidence 89999999974
No 127
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.56 E-value=0.008 Score=51.05 Aligned_cols=75 Identities=16% Similarity=0.218 Sum_probs=48.7
Q ss_pred eEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEec
Q 008109 453 KLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLAD 532 (577)
Q Consensus 453 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~ad 532 (577)
..+.++.|++|.|+..+ ..|-+.++- + . .+.. .. .+.+.+|+... +.++
T Consensus 21 ~~i~V~~GdtV~f~~~~------~~H~v~~~~--------~--~-~p~~-~~-----------~~~~~pG~t~~--~tF~ 69 (123)
T 1paz_A 21 AYIKANPGDTVTFIPVD------KGHNVESIK--------D--M-IPEG-AE-----------KFKSKINENYV--LTVT 69 (123)
T ss_dssp SEEEECTTCEEEEEESS------SSCCCEECT--------T--C-SCTT-CC-----------CCBCCTTCCEE--EECC
T ss_pred CEEEECCCCEEEEEECC------CCeEEEEec--------c--c-CCCC-cc-----------ceecCCCCEEE--EEeC
Confidence 35788999999987654 245555431 1 0 0000 00 01234677544 4558
Q ss_pred CceeEEEeeechhhhhcccEEEEEEecC
Q 008109 533 NPGVWFMHCHLEVHTSWGLKTAWLVLDG 560 (577)
Q Consensus 533 npG~w~~HCHil~H~d~GM~~~~~V~~~ 560 (577)
.||.|.|+|- .|...||...|.|.+.
T Consensus 70 ~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 70 QPGAYLVKCT--PHYAMGMIALIAVGDS 95 (123)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEESSS
T ss_pred CCEEEEEEeC--CcccCCCEEEEEEcCC
Confidence 9999999997 5999999999999763
No 128
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.37 E-value=0.0085 Score=50.88 Aligned_cols=38 Identities=24% Similarity=0.308 Sum_probs=30.7
Q ss_pred eCCCcEEEEEEEecCceeEEEeeechhhhhcccEEEEEEecC
Q 008109 519 VPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKTAWLVLDG 560 (577)
Q Consensus 519 vp~~~~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~ 560 (577)
+.+|+...+ .++.||.|.|+|- .|...||...|.|.+.
T Consensus 58 ~~pG~t~~~--tF~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 58 TTVGQEAVV--KFDKEGVYGFKCA--PHYMMGMVALVVVGDK 95 (123)
T ss_dssp CCTTSCEEE--ECCSCEEEEEECS--TTTTTTCEEEEEESSC
T ss_pred cCCCCEEEE--EeCCCeEEEEEeC--CccccCCEEEEEEcCC
Confidence 457776544 4589999999997 5999999999999764
No 129
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.35 E-value=0.018 Score=61.02 Aligned_cols=79 Identities=14% Similarity=0.232 Sum_probs=61.9
Q ss_pred eEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEec
Q 008109 453 KLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLAD 532 (577)
Q Consensus 453 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~ad 532 (577)
..+.++.|+.|+|++.|.....+..|.|.+.+.... +.+.||....+.|.++
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK----------------------------~DaiPGrtnsvtFtad 609 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVS----------------------------MEISPQQTSSITFVAD 609 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEECC
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCce----------------------------eeeCCCCeEEEEEEcC
Confidence 457899999999999996322246787777654321 2578899999999999
Q ss_pred CceeEEEeeechhhh-hcccEEEEEEec
Q 008109 533 NPGVWFMHCHLEVHT-SWGLKTAWLVLD 559 (577)
Q Consensus 533 npG~w~~HCHil~H~-d~GM~~~~~V~~ 559 (577)
.||.|.+||...-|. +.+|...+.|++
T Consensus 610 kPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 610 KPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp SCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CCEEEEEECCCcCCCCcccceEEEEEec
Confidence 999999999986654 468999999875
No 130
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=96.17 E-value=0.023 Score=50.81 Aligned_cols=90 Identities=8% Similarity=0.089 Sum_probs=61.3
Q ss_pred EEEe-cCCCEEEEEEeeCCCCC--CCCCceeecCCceEEEEecc-----------C--cCCCCCCCCCCCCCCCCeeeeE
Q 008109 454 LVVL-PFNTSVELIMQDTSILG--AENHPLHLHGYNFFVVGQGF-----------G--NFDPNKDPAKFNLVDPIERNTV 517 (577)
Q Consensus 454 ~~~~-~~g~~v~~~l~N~~~~~--~~~HP~HlHG~~F~Vl~~g~-----------g--~~~~~~~~~~~~~~~p~~rDTv 517 (577)
-+++ +.|+.|.|++.|.+... .+.|- |-+...+. + .|-+.. ..-....+.
T Consensus 59 ~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn-------~vi~~~~~~~~v~~~~m~~~~~~~v~~~-------d~~vl~~t~ 124 (167)
T 3ay2_A 59 DIQVSKACKEFTITLKHTGTQPKASMGHN-------LVIAKAEDMDGVFKDGVGAADTDYVKPD-------DARVVAHTK 124 (167)
T ss_dssp EEEEETTCSSEEEEEEECSCSCHHHHCBC-------CEEEEGGGHHHHHHHHGGGGGGTTSCTT-------CTTEEEECC
T ss_pred eEEEecCCCEEEEEEEECCCCccccccce-------EEeccCcchhhhHHHhhhcccccccccc-------ccchhccce
Confidence 4688 89999999999975310 11243 43333210 0 000000 011234566
Q ss_pred EeCCCcEEEEEEEec--CceeEEEeeechhhhhcccEEEEEEe
Q 008109 518 GVPSGGWVAIRFLAD--NPGVWFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 518 ~vp~~~~v~irf~ad--npG~w~~HCHil~H~d~GM~~~~~V~ 558 (577)
.|.+|+...|.|.++ .||.|-|+|-+--|.. ||-..|.|+
T Consensus 125 ~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 125 LIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp CBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred eeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 789999999999987 8999999999999998 999999986
No 131
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=95.95 E-value=0.051 Score=46.39 Aligned_cols=91 Identities=12% Similarity=0.183 Sum_probs=62.0
Q ss_pred eEEEecCC-CEEEEEEeeCCCCC--CCCCceeecCCceEEEEecc-----------C---cCCCCCCCCCCCCCCCCeee
Q 008109 453 KLVVLPFN-TSVELIMQDTSILG--AENHPLHLHGYNFFVVGQGF-----------G---NFDPNKDPAKFNLVDPIERN 515 (577)
Q Consensus 453 ~~~~~~~g-~~v~~~l~N~~~~~--~~~HP~HlHG~~F~Vl~~g~-----------g---~~~~~~~~~~~~~~~p~~rD 515 (577)
.-++++.| +.|.+++.|.+... .+.|- |-+...+. | .|-+.. ..-....
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~-------~vi~~~~~~~~~~~~~m~~~~~~~~v~~~-------~~~~~~~ 83 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHN-------WVLAKSADVGDVAKEGAHAGADNNFVTPG-------DKRVIAF 83 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBC-------CEEEEGGGHHHHHHHHHTTCGGGTTSCTT-------CTTCSEE
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccc-------eEEecCcchhhhHHHhhhccccccccccc-------cccceee
Confidence 35788999 99999999975311 12344 43333220 0 011000 0011235
Q ss_pred eEEeCCCcEEEEEEEec---CceeEEEeeechhhhhcccEEEEEEe
Q 008109 516 TVGVPSGGWVAIRFLAD---NPGVWFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 516 Tv~vp~~~~v~irf~ad---npG~w~~HCHil~H~d~GM~~~~~V~ 558 (577)
+..|.||+...|.|.++ .||.|-|.|-+--|.. ||-..+.|+
T Consensus 84 t~~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 84 TPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp CCCBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred eeEECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 66789999999999997 8999999999999998 899999986
No 132
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=95.58 E-value=0.032 Score=47.21 Aligned_cols=73 Identities=16% Similarity=0.180 Sum_probs=47.3
Q ss_pred eEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEec
Q 008109 453 KLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLAD 532 (577)
Q Consensus 453 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~ad 532 (577)
..+.++.|++|.|+..+ ..|-++++.. .+... .. .+.+.+|+...+.| +
T Consensus 21 ~~i~V~~GdtV~f~n~d------~~H~v~~~~~----------~~p~~--~~-----------~~~~~~g~t~~~tF--~ 69 (122)
T 2ux6_A 21 ASLKVAPGDTVTFIPTD------KGHNVETIKG----------MIPDG--AE-----------AFKSKINENYKVTF--T 69 (122)
T ss_dssp SEEEECTTEEEEEEESS------SSCCCEECTT----------CSCTT--CC-----------CCBCCTTCCEEEEE--C
T ss_pred CEEEECCCCEEEEEECC------CCcEEEEccc----------ccCCC--cc-----------eeecCCCCEEEEEe--C
Confidence 35788999999997442 2466665531 11100 00 11235677655555 8
Q ss_pred CceeEEEeeechhhhhcccEEEEEEecC
Q 008109 533 NPGVWFMHCHLEVHTSWGLKTAWLVLDG 560 (577)
Q Consensus 533 npG~w~~HCHil~H~d~GM~~~~~V~~~ 560 (577)
.||.|.|+|-+ |.. |.+.+.|.+.
T Consensus 70 ~~G~y~y~C~~--H~~--M~G~I~V~~~ 93 (122)
T 2ux6_A 70 APGVYGVKCTP--HPF--MVGVVQVGDA 93 (122)
T ss_dssp SCEEEEEEETT--EEE--EEEEEEESSS
T ss_pred CCEEEEEEeCC--Ccc--CEEEEEEeCC
Confidence 99999999987 766 9999999763
No 133
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.39 E-value=0.075 Score=45.74 Aligned_cols=70 Identities=21% Similarity=0.349 Sum_probs=51.7
Q ss_pred EEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEecCc
Q 008109 455 VVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLADNP 534 (577)
Q Consensus 455 ~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~adnp 534 (577)
+.++.|+.|+|++.|.. ..|. |++-+.+ . -+.+.||....+.|.++.|
T Consensus 62 l~Vp~G~~V~~~vts~D----V~Hs-------f~ip~~~------------------~---k~d~~PG~~~~~~~~~~~~ 109 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD----VIHG-------FHVEGTN------------------I---NVEVLPGEVSTVRYTFKRP 109 (135)
T ss_dssp EEEETTSEEEEEEEBSS----SCEE-------EEETTSS------------------C---EEEECBTBCEEEEEECCSC
T ss_pred EEEcCCCEEEEEEEeCC----ccce-------EEecCCC------------------c---eeEeCCCCcEEEEEEcCCC
Confidence 57899999999998842 3343 4431111 1 1346778888899999999
Q ss_pred eeEEEeeec---hhhhhcccEEEEEEe
Q 008109 535 GVWFMHCHL---EVHTSWGLKTAWLVL 558 (577)
Q Consensus 535 G~w~~HCHi---l~H~d~GM~~~~~V~ 558 (577)
|.|.++|.. ..| .+|-..+.|.
T Consensus 110 G~y~~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 110 GEYRIICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp EEEEEECCSCCSTTS--TTCEEEEEEE
T ss_pred EEEEEECcccCCCCc--CCCEEEEEEE
Confidence 999999987 566 5999998885
No 134
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=95.06 E-value=0.17 Score=43.14 Aligned_cols=44 Identities=16% Similarity=0.177 Sum_probs=38.5
Q ss_pred eeeEEeCCCcEEEEEEEec--Ccee-EEEeeechhhhhcccEEEEEEe
Q 008109 514 RNTVGVPSGGWVAIRFLAD--NPGV-WFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 514 rDTv~vp~~~~v~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~V~ 558 (577)
..+..|.||+...|.|.++ .+|. |-|.|-+--|.. ||-..+.|.
T Consensus 82 ~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 82 AHTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp EECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred eeeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 3566789999999999998 7866 999999999999 899999885
No 135
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=94.71 E-value=0.18 Score=42.85 Aligned_cols=44 Identities=18% Similarity=0.212 Sum_probs=38.4
Q ss_pred eeeEEeCCCcEEEEEEEec--Ccee-EEEeeechhhhhcccEEEEEEe
Q 008109 514 RNTVGVPSGGWVAIRFLAD--NPGV-WFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 514 rDTv~vp~~~~v~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~V~ 558 (577)
..|..|.||+...|.|.++ .||. |-|.|-+--|.. ||-..+.|+
T Consensus 82 ~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 82 AHTKVIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EECCCBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred eeeeeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 4556799999999999997 7876 999999999999 899999873
No 136
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=94.65 E-value=0.096 Score=44.58 Aligned_cols=44 Identities=18% Similarity=0.184 Sum_probs=39.1
Q ss_pred eeeEEeCCCcEEEEEEEec--Ccee-EEEeeechhhhhcccEEEEEEe
Q 008109 514 RNTVGVPSGGWVAIRFLAD--NPGV-WFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 514 rDTv~vp~~~~v~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~V~ 558 (577)
..|..|.||+...|.|.+. .+|. |-|.|-+--|.. ||-..+.|.
T Consensus 81 ~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 81 AHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp EECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred ccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 4566789999999999998 8995 999999999999 999999885
No 137
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=94.46 E-value=0.25 Score=41.53 Aligned_cols=97 Identities=13% Similarity=0.173 Sum_probs=59.2
Q ss_pred eEEEecC-CCEEEEEEeeCCCCCCCCCceeecCCceEEEEecc--CcC-CCCCCCCCCCC----CCCCeeeeEEeCCCcE
Q 008109 453 KLVVLPF-NTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGF--GNF-DPNKDPAKFNL----VDPIERNTVGVPSGGW 524 (577)
Q Consensus 453 ~~~~~~~-g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~--g~~-~~~~~~~~~~~----~~p~~rDTv~vp~~~~ 524 (577)
.-+.++. |+.|+++|.|.+.. |--.=||.|-+...+. +.. +.-.....-++ +....-.|..|.||+.
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~G~~-----p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes 92 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHPGNL-----PKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEK 92 (125)
T ss_dssp SEEEECTTCSEEEEEEECCSSC-----CHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCE
T ss_pred CEEEEecCCCEEEEEEEECCcc-----cccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcE
Confidence 4578875 99999999997631 1111144554443210 000 00000000011 1234567778999999
Q ss_pred EEEEEEec---CceeEEEeeechhhhhcccEEEEEEe
Q 008109 525 VAIRFLAD---NPGVWFMHCHLEVHTSWGLKTAWLVL 558 (577)
Q Consensus 525 v~irf~ad---npG~w~~HCHil~H~d~GM~~~~~V~ 558 (577)
..|.|.+. .+|.|-|-|- -|. ||-..+.|+
T Consensus 93 ~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 93 DSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 99999997 8999999999 888 999999873
No 138
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=93.11 E-value=0.47 Score=42.25 Aligned_cols=72 Identities=18% Similarity=0.296 Sum_probs=54.8
Q ss_pred EEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEecCc
Q 008109 455 VVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLADNP 534 (577)
Q Consensus 455 ~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~adnp 534 (577)
+.++.|+.|+|.+.|. +..|.|-+=.... . +.+.||..-.+.|.++.|
T Consensus 95 l~VP~G~~Vr~~vTS~----DViHsf~IP~lgi-------------------------k---~da~PG~~n~~~~~~~kp 142 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP----DVIHGFHVEGTNI-------------------------N---VEVLPGEVSTVRYTFKRP 142 (168)
T ss_dssp EEEETTSEEEEEEECS----SSCEEEEETTSSC-------------------------E---EEECTTBCEEEEEECCSC
T ss_pred EEEeCCCeEEEEEecC----CceEEEEECCCCe-------------------------E---EEecCCceeEEEEEeCCC
Confidence 5789999999999985 3566665432211 1 235678888899999999
Q ss_pred eeEEEeeec-hhhhhcccEEEEEEe
Q 008109 535 GVWFMHCHL-EVHTSWGLKTAWLVL 558 (577)
Q Consensus 535 G~w~~HCHi-l~H~d~GM~~~~~V~ 558 (577)
|.|.+.|.. --+-+.+|...+.|+
T Consensus 143 G~y~g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 143 GEYRIICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EEEEEECCSCCSTTGGGCEEEEEEE
T ss_pred EEEEEECCcCCCCCcCCCEEEEEEe
Confidence 999999985 446678999999886
No 139
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=90.13 E-value=2.9 Score=34.81 Aligned_cols=70 Identities=13% Similarity=0.095 Sum_probs=50.0
Q ss_pred EEEEEEEecCCCCcEEEEEc-CceeEEEEe--CCccc--------CceEEeEEEECCCceEEEEEEeCCCCCCceEEEEe
Q 008109 222 TYLLRLVNSALNDDLFFSIA-NHTLTVVEV--DAVYV--------KPFETETLVITPGQTTNVLLETKPHYPSATFFMTA 290 (577)
Q Consensus 222 ~~rlRliN~~~~~~~~~~i~-gh~~~via~--DG~~v--------~P~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~ 290 (577)
...|.+.|.+... ..+.+. |+.+.++-. +|..+ -.+......|.|||...+-...++....|.|.+++
T Consensus 21 ~~~ltv~N~s~~~-v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Ytl~a 99 (120)
T 3isy_A 21 KFNMSLKNQSERA-IEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTYEVKV 99 (120)
T ss_dssp EEEEEEEECSSSC-EEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEEEEEE
T ss_pred EEEEEEEcCCCCc-EEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccEEEEE
Confidence 4567888988544 457776 666555544 47655 13456799999999999999999643349999988
Q ss_pred ee
Q 008109 291 RP 292 (577)
Q Consensus 291 ~~ 292 (577)
..
T Consensus 100 ~l 101 (120)
T 3isy_A 100 TF 101 (120)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 140
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=82.40 E-value=17 Score=30.12 Aligned_cols=78 Identities=9% Similarity=0.134 Sum_probs=51.3
Q ss_pred eeEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCC---ccccccCCCCeEEEEEEECC-
Q 008109 47 TKTLVSVNGQFPGPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAY---ITQCPIQTGQSYIYNFTIVG- 122 (577)
Q Consensus 47 ~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~---~tq~~i~PG~~~~Y~~~~~~- 122 (577)
...+...|-+--.=+|+...|++..+.|.+...+ ..| .|+||-.. +....|+||++.+|+...++
T Consensus 21 ~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~---~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~ 89 (120)
T 3isy_A 21 KFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHK---ERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWKEV 89 (120)
T ss_dssp EEEEEEEECSSSCEEEEESSSCCEEEEEECTTCC---EEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEESSC
T ss_pred EEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCC---EEE--------EccccchhhhhhceEEECCCCEEEEEEEeCCC
Confidence 3333334443333578888888888888875332 111 35777443 33457999999999999963
Q ss_pred -CceeeEEeccccc
Q 008109 123 -QRGTLWWHAHISW 135 (577)
Q Consensus 123 -~~Gt~wYH~H~~~ 135 (577)
.+|+|..+.-.-+
T Consensus 90 ~~pG~Ytl~a~l~~ 103 (120)
T 3isy_A 90 PEPGTYEVKVTFKG 103 (120)
T ss_dssp CCSEEEEEEEEECC
T ss_pred CCCccEEEEEEEEe
Confidence 5899988865433
No 141
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=70.29 E-value=17 Score=33.09 Aligned_cols=76 Identities=16% Similarity=0.039 Sum_probs=54.5
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccccccCCCCeEEEEEEECCCceeeEEeccc-cccc-
Q 008109 60 PRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHI-SWLR- 137 (577)
Q Consensus 60 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~-~~~~- 137 (577)
..|.+..|+.|++.|++.. . | ||..++.. |+ +.-+-||..-...|.+ +++|+|+..|.- .|..
T Consensus 41 n~l~lP~g~~V~~~lTS~D-V---i--HSF~IP~l----gv----K~daiPGr~n~l~~~~-~~pG~y~g~CsE~CG~~H 105 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNS-V---M--HSFFIPRL----GS----QIYAMAGMQTRLHLIA-NEPGTYDGICAEICGPGH 105 (205)
T ss_dssp SEEEEETTSCEEEEEEESS-S---C--EEEEEGGG----TE----EEEECTTCCEEEEECC-SSSEEEEEEECSCCSTTS
T ss_pred ceEEEeCCCEEEEEEecCC-c---e--eeEEeccc----Cc----EEEecCCceEEEEEEe-CCCeEEEEEcccccccch
Confidence 4799999999999999873 2 2 45544422 11 2335689988889986 999999999974 3333
Q ss_pred ccceEeEEEe-CCC
Q 008109 138 STLYGPIIIL-PKR 150 (577)
Q Consensus 138 ~Gl~G~liV~-~~~ 150 (577)
+.|.+.++|. +++
T Consensus 106 s~M~~~v~vv~~~~ 119 (205)
T 1cyx_A 106 SGMKFKAIATPDRA 119 (205)
T ss_dssp TTCCEEEEEESSHH
T ss_pred hhceEEEEEECCHH
Confidence 7788888887 443
No 142
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=67.51 E-value=53 Score=31.76 Aligned_cols=76 Identities=13% Similarity=0.161 Sum_probs=53.7
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccccccCCCCeEEEEEEECCCceeeEEeccc-cccc-
Q 008109 60 PRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHI-SWLR- 137 (577)
Q Consensus 60 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~-~~~~- 137 (577)
..|.+..|+.|++.+++.. .| |+..++.- | + +.-+-||..-+..|.+ +++|+|+..|.. .|..
T Consensus 189 N~lvlP~g~~V~~~ltS~D----Vi--Hsf~iP~l----g---~-k~daiPG~~n~~~~~~-~~~G~y~g~CsE~CG~~H 253 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD----VI--HAWTIPAF----A---V-KQDAVPGRIAQLWFSV-DQEGVYFGQCSELCGINH 253 (298)
T ss_dssp SCEEEESSSEEEEEEEESS----SC--EEEEEGGG----T---E-EEEECTTCCEEEEEEC-SSSEEEEECCCSCCSTTT
T ss_pred ceEEEEcCCEEEEEEEeCC----cc--ceeeEccc----C---c-eEEecCCceEEEEEEe-CCCEEEEEEcccccCcCc
Confidence 5799999999999999963 22 34443321 1 1 1234579888888986 999999999984 3333
Q ss_pred ccceEeEEEeCCC
Q 008109 138 STLYGPIIILPKR 150 (577)
Q Consensus 138 ~Gl~G~liV~~~~ 150 (577)
+.|.+.+.|.+++
T Consensus 254 s~M~~~v~vvs~~ 266 (298)
T 3hb3_B 254 AYMPIVVKAVSQE 266 (298)
T ss_dssp TSCCEEEEEECHH
T ss_pred cCCeeEEEEEcHH
Confidence 6787777777654
No 143
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=60.83 E-value=20 Score=32.64 Aligned_cols=62 Identities=10% Similarity=0.065 Sum_probs=47.0
Q ss_pred EEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEeCCcccCceEEeEEEECCCceEEEEEEeCCCCCCceEEEEeeec
Q 008109 214 KLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTNVLLETKPHYPSATFFMTARPY 293 (577)
Q Consensus 214 ~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~ 293 (577)
.+.+..|+.+||+|.+.. -.+.|.|.....+ +...||..-.+.+.++++ |.|+.+|..+
T Consensus 42 ~l~lP~g~~V~~~lTS~D--ViHSF~IP~lgvK----------------~daiPGr~n~l~~~~~~p---G~y~g~CsE~ 100 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNS--VMHSFFIPRLGSQ----------------IYAMAGMQTRLHLIANEP---GTYDGICAEI 100 (205)
T ss_dssp EEEEETTSCEEEEEEESS--SCEEEEEGGGTEE----------------EEECTTCCEEEEECCSSS---EEEEEEECSC
T ss_pred eEEEeCCCEEEEEEecCC--ceeeEEecccCcE----------------EEecCCceEEEEEEeCCC---eEEEEEcccc
Confidence 589999999999999865 4556777654433 345578888888888888 9999999876
Q ss_pred ccC
Q 008109 294 VTG 296 (577)
Q Consensus 294 ~~~ 296 (577)
+..
T Consensus 101 CG~ 103 (205)
T 1cyx_A 101 CGP 103 (205)
T ss_dssp CST
T ss_pred ccc
Confidence 643
No 144
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=58.93 E-value=24 Score=29.54 Aligned_cols=69 Identities=17% Similarity=0.282 Sum_probs=39.5
Q ss_pred EECCCCCCCeEEEecCCEEEEEEE---eCCCCcee--ee--EcceeccCC-CCCCCCCCccccccCCCCeEEEEEEEC
Q 008109 52 SVNGQFPGPRIVAREGDRLLIKVV---NHVQHNIS--IH--WHGIRQLRS-GWADGPAYITQCPIQTGQSYIYNFTIV 121 (577)
Q Consensus 52 ~~ng~~pgP~i~v~~Gd~v~v~l~---N~l~~~~~--iH--~HG~~~~~~-~~~DGv~~~tq~~i~PG~~~~Y~~~~~ 121 (577)
.++|--..+.=.++.|+.+.|.+. |....... +| ..|+..+.. ...|+=- ...|||.+|+.++|.+.++
T Consensus 17 ~V~~C~~~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~-~~~CPl~~G~~~~y~~~~~ 93 (129)
T 1xwv_A 17 MVDGCHGSDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACH-FMKCPLVKGQQYDAKYTWN 93 (129)
T ss_dssp EETTCCBTSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGG-TSCSSBCTTCEEEEEEEEE
T ss_pred EECCCCCCCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccC-CccCcccCCEEEEEEEEeE
Confidence 444431345567888988887776 22222222 22 245555421 1134421 2569999999999998763
No 145
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=56.74 E-value=37 Score=32.20 Aligned_cols=76 Identities=9% Similarity=0.096 Sum_probs=53.3
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccccccCCCCeEEEEEEECCCceeeEEeccc-cccc-
Q 008109 60 PRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHI-SWLR- 137 (577)
Q Consensus 60 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~-~~~~- 137 (577)
..|.+..|+.|++.+++.. .- ||..++.. | +. .-+-||..-...|.+ +++|+|+..|.. -|..
T Consensus 171 n~l~lP~g~~v~~~~tS~D-Vi-----Hsf~ip~l----~---~k-~da~PG~~n~~~~~~-~~~G~y~g~Cse~CG~~H 235 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGAD-VI-----HSWTVPAF----G---VK-QDAVPGRLAQLWFRA-EREGIFFGQCSELCGISH 235 (262)
T ss_dssp SCEEEETTSEEEEEEEESS-SC-----EEEEEGGG----T---EE-EEECBTCCEEEEEEC-CSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEECc-cc-----ceeeeccc----C---ce-EEecCCceeEEEEec-CCcEEEEEEChHhcccCc
Confidence 4699999999999999873 22 44444422 1 11 234578888888986 999999999974 3333
Q ss_pred ccceEeEEEeCCC
Q 008109 138 STLYGPIIILPKR 150 (577)
Q Consensus 138 ~Gl~G~liV~~~~ 150 (577)
+.|.+.+.|.+++
T Consensus 236 ~~M~~~v~vv~~~ 248 (262)
T 2gsm_B 236 AYMPITVKVVSEE 248 (262)
T ss_dssp GGCCEEEEEECHH
T ss_pred ccCeEEEEEEcHH
Confidence 6787777776553
No 146
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=55.30 E-value=5.7 Score=39.58 Aligned_cols=26 Identities=19% Similarity=0.235 Sum_probs=18.8
Q ss_pred cccCCCCeEEEEEEECC-----CceeeEEec
Q 008109 106 CPIQTGQSYIYNFTIVG-----QRGTLWWHA 131 (577)
Q Consensus 106 ~~i~PG~~~~Y~~~~~~-----~~Gt~wYH~ 131 (577)
..|+||++.+.+|++.. ..|+|-+..
T Consensus 95 ~~L~pG~Sve~~~dla~~ydLs~gG~y~v~~ 125 (343)
T 2x3c_A 95 QLLKAGQSLTVQAEVSGLYDMSAQGQYSIRY 125 (343)
T ss_dssp EEECTTCEEEEEEECTTTBTCCSCEEEEEEE
T ss_pred EEeCCCCeEEEEEehhhccccCCCceEEEEE
Confidence 46899999999999842 345555543
No 147
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=51.31 E-value=42 Score=27.37 Aligned_cols=48 Identities=17% Similarity=0.353 Sum_probs=33.0
Q ss_pred CEEEEEEEecCCCC-cEEEEEcCc-eeEEEEeCCcccCceEEeEEEECCCceEEEEEEeC
Q 008109 221 KTYLLRLVNSALND-DLFFSIANH-TLTVVEVDAVYVKPFETETLVITPGQTTNVLLETK 278 (577)
Q Consensus 221 ~~~rlRliN~~~~~-~~~~~i~gh-~~~via~DG~~v~P~~~d~l~l~pgeR~dv~v~~~ 278 (577)
-.|+|+|+|.+... .+.|++.|. .+.++. + ..+.|.||+..++-|...
T Consensus 33 N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g-------~---~~i~v~~g~~~~~~v~v~ 82 (118)
T 2r39_A 33 NTYTLKVINKTQQVQEYNLDVKGLNDVSWYG-------K---QTIQVEPGEVLNLPMSLG 82 (118)
T ss_dssp EEEEEEEEECSSSCEEEEEEEESCSSCEEES-------C---CEEEECTTCEEEEEEEEE
T ss_pred EEEEEEEEECCCCCEEEEEEEeCCcccEEeC-------C---CcEEECCCCEEEEEEEEE
Confidence 37999999999666 566777764 233332 1 149999999877765543
No 148
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=50.77 E-value=29 Score=29.01 Aligned_cols=69 Identities=20% Similarity=0.229 Sum_probs=39.9
Q ss_pred EECCCCCCCeEEEecCCEEEEEEE---eCCCCceeeeE----cceeccC-CCCCCCCCCccccccCCCCeEEEEEEEC
Q 008109 52 SVNGQFPGPRIVAREGDRLLIKVV---NHVQHNISIHW----HGIRQLR-SGWADGPAYITQCPIQTGQSYIYNFTIV 121 (577)
Q Consensus 52 ~~ng~~pgP~i~v~~Gd~v~v~l~---N~l~~~~~iH~----HG~~~~~-~~~~DGv~~~tq~~i~PG~~~~Y~~~~~ 121 (577)
.++|- +.+.=.++.|+.+.|.+. |.......... .|+.++. ....|+=..-..|||.+|+.++|.+.++
T Consensus 19 ~V~~C-~~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 19 NVSPC-PTQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp EEESC-SSSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred EECCC-CCCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEeE
Confidence 44442 245667888988887776 23222222333 3444431 1113442112469999999999998874
No 149
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=49.34 E-value=35 Score=33.70 Aligned_cols=16 Identities=19% Similarity=0.447 Sum_probs=14.4
Q ss_pred ccccCCCCeEEEEEEE
Q 008109 105 QCPIQTGQSYIYNFTI 120 (577)
Q Consensus 105 q~~i~PG~~~~Y~~~~ 120 (577)
..||+|||+.+.+.++
T Consensus 319 ~~pI~PGETr~~~v~a 334 (382)
T 1yew_A 319 NSPLAPGETRTVDVTA 334 (382)
T ss_dssp CSCBCTTCEEEEEEEE
T ss_pred CCCcCCCceeEEEEEe
Confidence 3679999999999998
No 150
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=46.64 E-value=39 Score=31.35 Aligned_cols=75 Identities=12% Similarity=0.032 Sum_probs=50.4
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccccccCCCCeEEEEEEECCCceeeEEeccc-cccc-
Q 008109 60 PRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHI-SWLR- 137 (577)
Q Consensus 60 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~-~~~~- 137 (577)
..+.+..|+.|++.++... .- |+..++.- | +. .-.-||..-...|.+ +++|+|+..|.. -|..
T Consensus 140 n~lvlP~~~~Vr~~vtS~D-Vi-----Hsf~vP~l----g---~K-~DaiPGr~n~~~~~~-~~~G~y~g~Cse~CG~~H 204 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSED-VL-----HSWAVPSL----G---LK-TDAIPGRLNQTTLMS-SRPGLYYGQCSEICGSNH 204 (227)
T ss_dssp SCEEEETTSCEEEEEEESS-SC-----EEEEEGGG----T---EE-EEECTTCCEEEEECC-SSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEeCc-cc-----ceeeeccc----C---cE-EEecCCceEEEEEec-CCcEEEEEEehhhccccc
Confidence 6799999999999999863 22 34443321 1 11 123568888888886 999999999974 3332
Q ss_pred ccceEeEEEeCC
Q 008109 138 STLYGPIIILPK 149 (577)
Q Consensus 138 ~Gl~G~liV~~~ 149 (577)
+-|.+.+.|.++
T Consensus 205 s~M~~~v~vv~~ 216 (227)
T 1v54_B 205 SFMPIVLELVPL 216 (227)
T ss_dssp GGCCEEEEEECH
T ss_pred ccCeEEEEEEcH
Confidence 567666666554
No 151
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=41.03 E-value=53 Score=31.17 Aligned_cols=62 Identities=11% Similarity=0.179 Sum_probs=47.0
Q ss_pred EEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEeCCcccCceEEeEEEECCCceEEEEEEeCCCCCCceEEEEeeec
Q 008109 214 KLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTNVLLETKPHYPSATFFMTARPY 293 (577)
Q Consensus 214 ~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~ 293 (577)
.+.++.|+.+||++.+.. -.+.|.+.....+ +..-||..-.+.+.++++ |.|..+|..+
T Consensus 172 ~l~lP~g~~v~~~~tS~D--ViHsf~ip~l~~k----------------~da~PG~~n~~~~~~~~~---G~y~g~Cse~ 230 (262)
T 2gsm_B 172 AMVVPVNKTVVVQVTGAD--VIHSWTVPAFGVK----------------QDAVPGRLAQLWFRAERE---GIFFGQCSEL 230 (262)
T ss_dssp CEEEETTSEEEEEEEESS--SCEEEEEGGGTEE----------------EEECBTCCEEEEEECCSC---EEEEECCCSC
T ss_pred eEEEecCCEEEEEEEECc--ccceeeecccCce----------------EEecCCceeEEEEecCCc---EEEEEEChHh
Confidence 489999999999998764 4566777654433 334578888888888888 9999999876
Q ss_pred ccC
Q 008109 294 VTG 296 (577)
Q Consensus 294 ~~~ 296 (577)
++.
T Consensus 231 CG~ 233 (262)
T 2gsm_B 231 CGI 233 (262)
T ss_dssp CST
T ss_pred ccc
Confidence 553
No 152
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=39.47 E-value=1.1e+02 Score=29.47 Aligned_cols=76 Identities=17% Similarity=0.268 Sum_probs=54.3
Q ss_pred ceEEEecCCCEEEEEEeeCCCCCCCCCceeecCCceEEEEeccCcCCCCCCCCCCCCCCCCeeeeEEeCCCcEEEEEEEe
Q 008109 452 TKLVVLPFNTSVELIMQDTSILGAENHPLHLHGYNFFVVGQGFGNFDPNKDPAKFNLVDPIERNTVGVPSGGWVAIRFLA 531 (577)
Q Consensus 452 ~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~~~v~irf~a 531 (577)
.+-+.++.|+.|++.+.+.+ ..|.|.+=.... ..| +-||....+.|.+
T Consensus 188 dN~lvlP~g~~V~~~ltS~D----ViHsf~iP~lg~-------------------------k~d---aiPG~~n~~~~~~ 235 (298)
T 3hb3_B 188 DNPVVVPVGKKVLVQVTATD----VIHAWTIPAFAV-------------------------KQD---AVPGRIAQLWFSV 235 (298)
T ss_dssp SSCEEEESSSEEEEEEEESS----SCEEEEEGGGTE-------------------------EEE---ECTTCCEEEEEEC
T ss_pred cceEEEEcCCEEEEEEEeCC----ccceeeEcccCc-------------------------eEE---ecCCceEEEEEEe
Confidence 34578899999999999853 556655533211 223 4467778899999
Q ss_pred cCceeEEEeeechh-hhhcccEEEEEEec
Q 008109 532 DNPGVWFMHCHLEV-HTSWGLKTAWLVLD 559 (577)
Q Consensus 532 dnpG~w~~HCHil~-H~d~GM~~~~~V~~ 559 (577)
+.||.|...|.-.- .-+..|-..++|.+
T Consensus 236 ~~~G~y~g~CsE~CG~~Hs~M~~~v~vvs 264 (298)
T 3hb3_B 236 DQEGVYFGQCSELCGINHAYMPIVVKAVS 264 (298)
T ss_dssp SSSEEEEECCCSCCSTTTTSCCEEEEEEC
T ss_pred CCCEEEEEEcccccCcCccCCeeEEEEEc
Confidence 99999999998644 44567777777764
No 153
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=36.08 E-value=38 Score=28.29 Aligned_cols=48 Identities=17% Similarity=0.202 Sum_probs=26.8
Q ss_pred EEEEEeCCCCc---eeeeEcceeccCCC---CCCCCCCccccccCCCCeEEEEEE
Q 008109 71 LIKVVNHVQHN---ISIHWHGIRQLRSG---WADGPAYITQCPIQTGQSYIYNFT 119 (577)
Q Consensus 71 ~v~l~N~l~~~---~~iH~HG~~~~~~~---~~DGv~~~tq~~i~PG~~~~Y~~~ 119 (577)
+|++.|....+ .+=||.=....+.- ..+||-| .|..|.||++|+|.=-
T Consensus 34 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG-~qP~L~PGe~f~YtSg 87 (127)
T 2f1e_A 34 SIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVG-EQPWLRPGEAFHYTSG 87 (127)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTT-BCCEECTTCEEEEEEE
T ss_pred EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeec-CCCcCCCCCceEEeCC
Confidence 36667776543 34466543322210 1355543 4677899998877643
No 154
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=35.00 E-value=1.2e+02 Score=23.52 Aligned_cols=71 Identities=10% Similarity=0.061 Sum_probs=40.2
Q ss_pred EEecCCEEEEEEEecCCCCcEEEEEcCc--eeEEEEeCCcccCceEEeEEEECCCceEEEEEEeCCCCCCceEEEEeee
Q 008109 216 KVKSGKTYLLRLVNSALNDDLFFSIANH--TLTVVEVDAVYVKPFETETLVITPGQTTNVLLETKPHYPSATFFMTARP 292 (577)
Q Consensus 216 ~v~~G~~~rlRliN~~~~~~~~~~i~gh--~~~via~DG~~v~P~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~ 292 (577)
--+||+++++|++--..... -..+. .+++..-+|..+. .-.........++..+..++.+.-|.|.|++..
T Consensus 12 iYrPGetV~~~~~~~~~~~~---p~~~~~~~v~l~dp~g~~v~---~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 12 IYKPGQTVKFRVVSMDENFH---PLNELIPLVYIQDPKGNRIA---QWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp EECTTCEEEEEEEEECGGGC---BCCCEEEEEEEECTTSCEEE---EEEEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred ccCCCCEEEEEEEEECCCCc---CCCCCceEEEEECCCCCEEE---EEEeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 35799999999876542211 01111 3445555554221 111222345567777777765555999999864
No 155
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=34.82 E-value=1e+02 Score=25.05 Aligned_cols=63 Identities=11% Similarity=0.139 Sum_probs=36.8
Q ss_pred CCeEEEecCCEEEEEEEeCCCCceeeeEcc-----------eeccCCCCC-CCCCCccccccCCCCeEEEEEEECCCcee
Q 008109 59 GPRIVAREGDRLLIKVVNHVQHNISIHWHG-----------IRQLRSGWA-DGPAYITQCPIQTGQSYIYNFTIVGQRGT 126 (577)
Q Consensus 59 gP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG-----------~~~~~~~~~-DGv~~~tq~~i~PG~~~~Y~~~~~~~~Gt 126 (577)
|-+|.++.||++.|.|.-+-.....=.... +.+... +. |..+ ...+..|+...+.|++ ..+|+
T Consensus 14 ~~~i~~~~Ge~~~I~L~~NPtTGY~W~~~~~~~~~~l~~~gl~~~s~-y~~~~~~---~~~vG~gG~~~~~f~a-~~~G~ 88 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGNPTTGYMWTRVGFVGKDVLSDEILEVVCK-YTPTPSS---TPMVGVGGIYVVLVKP-RKRGH 88 (116)
T ss_dssp CCCEEECSSCCEEEEEECCTTSSCEEEETTCTTSSCCCCSSEEEEEE-EECCCCS---SSSSCCCCEEEEEEEE-CSSSS
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCcEEEEecCCCcccccccccEEEEe-EEeCCCC---CCCcCCCceEEEEEEE-eCCce
Confidence 458999999999999997765444333332 111000 00 1100 1135567888889987 66774
No 156
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=32.81 E-value=41 Score=26.81 Aligned_cols=52 Identities=12% Similarity=0.102 Sum_probs=32.6
Q ss_pred EEEEEEEeCCCCc---eeeeEcceeccCCCCCCCCCCccccccCCCCeEEEEEEEC-CCcee
Q 008109 69 RLLIKVVNHVQHN---ISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIV-GQRGT 126 (577)
Q Consensus 69 ~v~v~l~N~l~~~---~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~-~~~Gt 126 (577)
.++|.|+|-|+.+ ..++..|.-.. ++ --+....|.||++.++++... ..+|.
T Consensus 23 ~v~vsf~NPL~~~L~~c~~~vEG~GL~-----~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~ 78 (102)
T 2xzz_A 23 EVQIVFKNPLPVTLTNVVFRLEGSGLQ-----RP-KILNVGDIGGNETVTLRQSFVPVRPGP 78 (102)
T ss_dssp EEEEEEECCSSSCBCSEEEEEEETTTE-----EE-EEEEECCBCTTCEEEEEEEECCCSCSS
T ss_pred EEEEEEECCCCCcccCEEEEEECCCCC-----cc-eEEEcCcCCCCCEEEEEEEEecCcccc
Confidence 6789999999764 34555553221 11 011224699999999999883 55554
No 157
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=32.70 E-value=39 Score=28.18 Aligned_cols=48 Identities=23% Similarity=0.252 Sum_probs=26.2
Q ss_pred EEEEEeCCCCc---eeeeEcceeccCCC---CCCCCCCccccccCCCCeEEEEEE
Q 008109 71 LIKVVNHVQHN---ISIHWHGIRQLRSG---WADGPAYITQCPIQTGQSYIYNFT 119 (577)
Q Consensus 71 ~v~l~N~l~~~---~~iH~HG~~~~~~~---~~DGv~~~tq~~i~PG~~~~Y~~~ 119 (577)
+|++.|....+ .+=||.=....+.- ..+||-| .|..|.||++|+|.=-
T Consensus 33 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG-~qP~L~PGe~f~YtSg 86 (126)
T 1xvs_A 33 LITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVG-EQPRIKANDEYTYSSG 86 (126)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTCCEEEEEEESBTT-BCCEECTTCEEEEEEE
T ss_pred EEEEEECCCCCEEEEecEEEEEeCCCCEEEEECCceEc-CCCcCCCCCceEEeCC
Confidence 36667766543 34455533322110 0345543 4677899998777644
No 158
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=32.01 E-value=53 Score=27.03 Aligned_cols=67 Identities=22% Similarity=0.207 Sum_probs=41.0
Q ss_pred ECCCCCC------CeEEEecC-CEEEEEEEeCCCCcee--eeEcceeccCCCCCCC---------CCCccccccCCCCeE
Q 008109 53 VNGQFPG------PRIVAREG-DRLLIKVVNHVQHNIS--IHWHGIRQLRSGWADG---------PAYITQCPIQTGQSY 114 (577)
Q Consensus 53 ~ng~~pg------P~i~v~~G-d~v~v~l~N~l~~~~~--iH~HG~~~~~~~~~DG---------v~~~tq~~i~PG~~~ 114 (577)
++..+|| -.|++++| ++++|+|.|.-+.|.- -|+|=....+.-..|= .|.-|..-..||++.
T Consensus 4 ~~~miPGei~~~~g~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k 83 (126)
T 4ubp_B 4 NNYIVPGEYRVAEGEIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEM 83 (126)
T ss_dssp -CCCCTTCEECCSSEEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEE
T ss_pred CCCCCCCeEEeCCCCEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeE
Confidence 4445565 35888888 6899999999976654 5777666554432332 222233445667766
Q ss_pred EEEEE
Q 008109 115 IYNFT 119 (577)
Q Consensus 115 ~Y~~~ 119 (577)
+-+.-
T Consensus 84 ~V~LV 88 (126)
T 4ubp_B 84 EVELT 88 (126)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66654
No 159
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=32.01 E-value=53 Score=27.03 Aligned_cols=67 Identities=22% Similarity=0.207 Sum_probs=41.0
Q ss_pred ECCCCCC------CeEEEecC-CEEEEEEEeCCCCcee--eeEcceeccCCCCCCC---------CCCccccccCCCCeE
Q 008109 53 VNGQFPG------PRIVAREG-DRLLIKVVNHVQHNIS--IHWHGIRQLRSGWADG---------PAYITQCPIQTGQSY 114 (577)
Q Consensus 53 ~ng~~pg------P~i~v~~G-d~v~v~l~N~l~~~~~--iH~HG~~~~~~~~~DG---------v~~~tq~~i~PG~~~ 114 (577)
++..+|| -.|++++| ++++|+|.|.-+.|.- -|+|=....+.-..|= .|.-|..-..||++.
T Consensus 4 ~~~miPGei~~~~g~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k 83 (126)
T 4ac7_B 4 NNYIVPGEYRVAEGEIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEM 83 (126)
T ss_dssp -CCCCTTCEECCSSEEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEE
T ss_pred CCCCCCCeEEeCCCCEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeE
Confidence 4445565 35888888 6899999999976654 5777666554432332 222233445667766
Q ss_pred EEEEE
Q 008109 115 IYNFT 119 (577)
Q Consensus 115 ~Y~~~ 119 (577)
+-+.-
T Consensus 84 ~V~LV 88 (126)
T 4ac7_B 84 EVELT 88 (126)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66654
No 160
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=29.58 E-value=49 Score=28.05 Aligned_cols=46 Identities=20% Similarity=0.231 Sum_probs=0.0
Q ss_pred EEEEEeCCC---CceeeeEcceeccCCCC---CCCCCCccccccCCCCeEEEE
Q 008109 71 LIKVVNHVQ---HNISIHWHGIRQLRSGW---ADGPAYITQCPIQTGQSYIYN 117 (577)
Q Consensus 71 ~v~l~N~l~---~~~~iH~HG~~~~~~~~---~DGv~~~tq~~i~PG~~~~Y~ 117 (577)
+|++.|... +-.+=||.=....+.-. .+||-| .|..|.||++|+|.
T Consensus 38 ~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G~GVVG-eqPvL~PGe~F~Yt 89 (139)
T 1xq4_A 38 TVRITNTGSHPAQVISRHWIITDGEERVQEVRGLGVVG-QQPLLAPGETFEYT 89 (139)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTSCEEEEEEESSSS-CCCEECTTCEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEECCCeec-CCCcCCCCCceEEc
No 161
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=28.93 E-value=79 Score=26.72 Aligned_cols=35 Identities=6% Similarity=0.026 Sum_probs=26.5
Q ss_pred EEEECCCceeeEEeccccccc-ccceEeEEEeCCCC
Q 008109 117 NFTIVGQRGTLWWHAHISWLR-STLYGPIIILPKRG 151 (577)
Q Consensus 117 ~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~ 151 (577)
.|++-..+|++||-|-..++= .||...|.|.....
T Consensus 76 ~v~L~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~~ 111 (138)
T 1jer_A 76 VIERLDELGMHYFVCTVGTHCSNGQKLSINVVAANA 111 (138)
T ss_dssp EEEECCSSEEEEEECCSTTTGGGTCEEEEEEECCC-
T ss_pred EEEeccCCcCEEEEcCCCCccccCCEEEEEEcCCCC
Confidence 456525799999999876653 89999999987654
No 162
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=28.40 E-value=2.4e+02 Score=23.44 Aligned_cols=64 Identities=13% Similarity=0.199 Sum_probs=35.4
Q ss_pred CCeEEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCC--------CCccccccCCCCeEEEEEEECCCcee
Q 008109 59 GPRIVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGP--------AYITQCPIQTGQSYIYNFTIVGQRGT 126 (577)
Q Consensus 59 gP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv--------~~~tq~~i~PG~~~~Y~~~~~~~~Gt 126 (577)
|-+|.++.||++.|.|.-+-.....=...... .....|++ |. ....+..|++..+.|++ ..+|+
T Consensus 32 ~~~I~v~~Ge~~~I~L~~NPTTGY~W~~~~~~--~~~L~~~~~~v~~~y~p~-~~~~vGagG~~~w~f~A-~~~G~ 103 (131)
T 2h7w_A 32 GATLTVAVGELVEIQLPSNPTTGFAWYFEGGT--KESPNESMFTVENKYFPP-DSKLLGAGGTEHFHVTV-KAAGT 103 (131)
T ss_dssp TCEEEECTTCEEEEEEEECGGGSCEEEBTTTB--SSCSCTTTEEEEEEEECC-TTCCTTCCEEEEEEEEE-CSSEE
T ss_pred CCEEEEeCCCEEEEEeCCCCCCCeEEEEecCC--CccccccceeecceeeeC-CCCCcCCCcEEEEEEEE-ccCce
Confidence 56899999999999999765333222221110 00012221 10 01134556778888887 66664
No 163
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=27.88 E-value=43 Score=28.21 Aligned_cols=48 Identities=17% Similarity=0.176 Sum_probs=25.9
Q ss_pred EEEEEeCCCCc---eeeeEcceeccCCC---CCCCCCCccccccCCCCeEEEEEE
Q 008109 71 LIKVVNHVQHN---ISIHWHGIRQLRSG---WADGPAYITQCPIQTGQSYIYNFT 119 (577)
Q Consensus 71 ~v~l~N~l~~~---~~iH~HG~~~~~~~---~~DGv~~~tq~~i~PG~~~~Y~~~ 119 (577)
+|++.|....+ .+=||.=....+.- ..+||-| .|..|.||++|+|.=-
T Consensus 33 ~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG-eqP~L~PGe~F~YtSg 86 (134)
T 1tza_A 33 TITIINLGEQAAKLETRHWIITDANGKTSEVQGAGVVG-ETPTIPPNTAYQYTSG 86 (134)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEEESBTT-BCCEECTTEEEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEEcCceEc-CCCcCCCCCceEEcCC
Confidence 36667766533 33455433322110 0345543 4677899998877654
No 164
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=27.51 E-value=76 Score=29.43 Aligned_cols=49 Identities=24% Similarity=0.372 Sum_probs=33.9
Q ss_pred CeEEEecCCEEEEEEEeCCC------CceeeeEcceeccCCCCCCCCCCccccccCCCCeEE
Q 008109 60 PRIVAREGDRLLIKVVNHVQ------HNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYI 115 (577)
Q Consensus 60 P~i~v~~Gd~v~v~l~N~l~------~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~ 115 (577)
.+|+.+-|-+|.|.|.|..+ .+.++..-|...... .-++..+.|||++|
T Consensus 129 EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~-------aG~~i~L~PGESiT 183 (246)
T 3kmh_A 129 EDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHT-------AGSQLRLSPGESIC 183 (246)
T ss_dssp EEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEEC-------TTCEEEECTTCEEE
T ss_pred ccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeC-------CCCEEEECCCCeEe
Confidence 57888889899999999963 355666666554432 12346789999765
No 165
>2cio_B Inhibitor of cysteine peptidase; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Trypanosoma brucei}
Probab=27.34 E-value=1.7e+02 Score=23.89 Aligned_cols=25 Identities=12% Similarity=0.166 Sum_probs=18.5
Q ss_pred CCeEEEecCCEEEEEEEeCCCCcee
Q 008109 59 GPRIVAREGDRLLIKVVNHVQHNIS 83 (577)
Q Consensus 59 gP~i~v~~Gd~v~v~l~N~l~~~~~ 83 (577)
|-+|.++.||++.|.|.-+-.....
T Consensus 12 ~~ti~l~~Ge~~~I~L~~NPtTGY~ 36 (121)
T 2cio_B 12 NKTIRMVIGETFTIELESNPTTGYT 36 (121)
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCeE
Confidence 4569999999999999866544333
No 166
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=27.06 E-value=63 Score=26.39 Aligned_cols=33 Identities=21% Similarity=0.387 Sum_probs=28.2
Q ss_pred EEEecCceeEEEeeechhhhhcccEEEE-EEecC
Q 008109 528 RFLADNPGVWFMHCHLEVHTSWGLKTAW-LVLDG 560 (577)
Q Consensus 528 rf~adnpG~w~~HCHil~H~d~GM~~~~-~V~~~ 560 (577)
++..+.+|..-|=|=...|=..||-+.+ .|...
T Consensus 73 ~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~ 106 (116)
T 1x9u_A 73 KIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAG 106 (116)
T ss_dssp EEECCSCEEEEEECCSTTTTTTTCEEEEEEECC-
T ss_pred EEEECCCCCEEEECCCCCccccCCEEEEEEECCC
Confidence 4556889999999999999999999999 88654
No 167
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=24.58 E-value=1.1e+02 Score=28.27 Aligned_cols=62 Identities=8% Similarity=0.084 Sum_probs=45.4
Q ss_pred EEEEecCCEEEEEEEecCCCCcEEEEEcCceeEEEEeCCcccCceEEeEEEECCCceEEEEEEeCCCCCCceEEEEeeec
Q 008109 214 KLKVKSGKTYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYVKPFETETLVITPGQTTNVLLETKPHYPSATFFMTARPY 293 (577)
Q Consensus 214 ~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pgeR~dv~v~~~~~~~~g~y~l~~~~~ 293 (577)
.+.+..|+.+|+++-.+. -.|.|.+.....+ +..-||..-.+-+.++++ |.|..+|..+
T Consensus 141 ~lvlP~~~~Vr~~vtS~D--ViHsf~vP~lg~K----------------~DaiPGr~n~~~~~~~~~---G~y~g~Cse~ 199 (227)
T 1v54_B 141 RVVLPMEMTIRMLVSSED--VLHSWAVPSLGLK----------------TDAIPGRLNQTTLMSSRP---GLYYGQCSEI 199 (227)
T ss_dssp CEEEETTSCEEEEEEESS--SCEEEEEGGGTEE----------------EEECTTCCEEEEECCSSC---EEEEECCCSC
T ss_pred eEEEecCCEEEEEEEeCc--ccceeeecccCcE----------------EEecCCceEEEEEecCCc---EEEEEEehhh
Confidence 589999999999998754 4566777654433 234567777777788888 9999999876
Q ss_pred ccC
Q 008109 294 VTG 296 (577)
Q Consensus 294 ~~~ 296 (577)
++.
T Consensus 200 CG~ 202 (227)
T 1v54_B 200 CGS 202 (227)
T ss_dssp CST
T ss_pred ccc
Confidence 543
No 168
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=23.31 E-value=86 Score=25.57 Aligned_cols=35 Identities=6% Similarity=0.034 Sum_probs=26.5
Q ss_pred EEEEECCCceeeEEeccccccc-ccceEeE-EEeCCCC
Q 008109 116 YNFTIVGQRGTLWWHAHISWLR-STLYGPI-IILPKRG 151 (577)
Q Consensus 116 Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~l-iV~~~~~ 151 (577)
..+++ ..+|++||-|-..++= .||..+| .|.....
T Consensus 72 ~~v~l-~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~~ 108 (116)
T 1x9u_A 72 VKIML-NTTGPQYYICTVGDHCRVGQKLSINVVGAGGA 108 (116)
T ss_dssp EEEEC-CSCEEEEEECCSTTTTTTTCEEEEEEECC---
T ss_pred eEEEE-CCCCCEEEECCCCCccccCCEEEEEEECCCCC
Confidence 56777 7899999999876553 8999999 8886653
No 169
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=23.05 E-value=1.1e+02 Score=25.83 Aligned_cols=33 Identities=24% Similarity=0.392 Sum_probs=28.9
Q ss_pred EEe-cCceeEEEeeechhhhhcccEEEEEEecCC
Q 008109 529 FLA-DNPGVWFMHCHLEVHTSWGLKTAWLVLDGK 561 (577)
Q Consensus 529 f~a-dnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 561 (577)
|.. +.+|.+-|=|=+..|=..||-+.|.|....
T Consensus 77 v~L~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~ 110 (138)
T 1jer_A 77 IERLDELGMHYFVCTVGTHCSNGQKLSINVVAAN 110 (138)
T ss_dssp EEECCSSEEEEEECCSTTTGGGTCEEEEEEECCC
T ss_pred EEeccCCcCEEEEcCCCCccccCCEEEEEEcCCC
Confidence 555 789999999999999999999999997543
No 170
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=22.08 E-value=86 Score=26.06 Aligned_cols=49 Identities=12% Similarity=0.192 Sum_probs=30.9
Q ss_pred EEEEEEEecCCCCcEEEEEcCceeEEEEeCCccc----CceEEeEEEECCCceEEE
Q 008109 222 TYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYV----KPFETETLVITPGQTTNV 273 (577)
Q Consensus 222 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v----~P~~~d~l~l~pgeR~dv 273 (577)
.|++||-|.+... ..|-...|.|...||... ..+....=.|.|||.++.
T Consensus 32 aY~I~I~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~Y 84 (127)
T 2f1e_A 32 AYSIRIQNAGAVP---ARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHY 84 (127)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEE
T ss_pred EEEEEEEeCCCCC---EEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEE
Confidence 6889999998542 466666677776666532 112223446888887665
No 171
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=21.98 E-value=75 Score=26.41 Aligned_cols=49 Identities=12% Similarity=0.174 Sum_probs=31.3
Q ss_pred EEEEEEEecCCCCcEEEEEcCceeEEEEeCCccc----CceEEeEEEECCCceEEE
Q 008109 222 TYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYV----KPFETETLVITPGQTTNV 273 (577)
Q Consensus 222 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v----~P~~~d~l~l~pgeR~dv 273 (577)
.|++||-|.+... ..|-...|.|...||... +.+....=.|.|||.++.
T Consensus 31 aY~I~I~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~Y 83 (126)
T 1xvs_A 31 AYLITIKNLSSQT---VQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTY 83 (126)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEE
T ss_pred EEEEEEEECCCCC---EEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEE
Confidence 6889999998543 466667777777776532 111223447888887655
No 172
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=20.26 E-value=80 Score=26.55 Aligned_cols=49 Identities=12% Similarity=0.204 Sum_probs=31.2
Q ss_pred EEEEEEEecCCCCcEEEEEcCceeEEEEeCCccc----CceEEeEEEECCCceEEE
Q 008109 222 TYLLRLVNSALNDDLFFSIANHTLTVVEVDAVYV----KPFETETLVITPGQTTNV 273 (577)
Q Consensus 222 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v----~P~~~d~l~l~pgeR~dv 273 (577)
.|++||-|.+... ..|-...|.|...||... ..+....=.|.|||.+..
T Consensus 31 aY~ItI~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe~F~Y 83 (134)
T 1tza_A 31 SYTITIINLGEQA---AKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQY 83 (134)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTSCEEEEEEESBTTBCCEECTTEEEEE
T ss_pred EEEEEEEeCCCCC---EEEEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCCceEE
Confidence 6889999998542 466666677777776532 111223447888886655
No 173
>3es6_B Prolactin-inducible protein; major histocompatibility complex, protein-protein complex, P inducible protein, zinc 2-glycoprotein, ZAG-PIP complex; HET: NDG NAG BMA MAN P6G; 3.23A {Homo sapiens} SCOP: b.1.18.23
Probab=20.12 E-value=2.8e+02 Score=22.53 Aligned_cols=56 Identities=11% Similarity=0.065 Sum_probs=35.1
Q ss_pred EEEecCC--EEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccc-cccCCCCeEEEEEEE
Q 008109 62 IVAREGD--RLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQ-CPIQTGQSYIYNFTI 120 (577)
Q Consensus 62 i~v~~Gd--~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq-~~i~PG~~~~Y~~~~ 120 (577)
.-+.+|| .|.+++.|.|.+...+...=. .+...++.+...+ .-|.++++.+|.|.+
T Consensus 16 ysv~rgE~~~~~~~V~nyl~~~~~v~v~L~---~s~~~~~~~~~~~t~Clc~~~~~t~~W~i 74 (118)
T 3es6_B 16 KSVRPNDEVTAVLAVQTELKECMVVKTYLI---SSIPLQGAFNYKYTACLCDDNPKTFYWDF 74 (118)
T ss_dssp SEECSSCCEEEEEEEEECCSSCEEEEEEEE---ESSCCCSGGGCEEEEEECSSSCEEEEEEE
T ss_pred ceEecCCEEEEEEEEEecccceEEEEEEec---CCcCEEccCCCcccEEecCCCceEEEEEE
Confidence 3467787 456788999987766665422 1222555543222 127788888888887
No 174
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=20.07 E-value=69 Score=31.23 Aligned_cols=73 Identities=15% Similarity=-0.014 Sum_probs=0.0
Q ss_pred EEEecCCEEEEEEEeCCCCceeeeEcceeccCCCCCCCCCCccccccCCCCeEEEEEEECCCceeeEEeccc-cccc-cc
Q 008109 62 IVAREGDRLLIKVVNHVQHNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYIYNFTIVGQRGTLWWHAHI-SWLR-ST 139 (577)
Q Consensus 62 i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~-~~~~-~G 139 (577)
|.+..|..|++.++.. +.-++.....+... +|-+| |..-...|.+ +++|+|+..|.- .|.. +.
T Consensus 153 l~lP~g~~V~~~lTS~-DViHsf~IP~lg~k----~DaiP---------Gr~n~~~~~~-~~~G~y~g~CsE~CG~~Hs~ 217 (315)
T 1fft_B 153 IAFPANTPVYFKVTSN-SVMNSFFIPRLGSQ----IYAMA---------GMQTRLHLIA-NEPGTYDGISASYSGPGFSG 217 (315)
T ss_dssp CCCCSSSEEEEEECBS-SSCEEEEEGGGTEE----EEECB---------TSCEEEEEEC-CSCBCCEEBCCSCCSTTTTT
T ss_pred EEEeCCCEEEEEEEeC-CccceeeecccCcE----EeecC---------CcceeeEEec-CCCeEEEEeccccchhhHHh
Q ss_pred ceEeEEEe-CC
Q 008109 140 LYGPIIIL-PK 149 (577)
Q Consensus 140 l~G~liV~-~~ 149 (577)
|.+.++|. ++
T Consensus 218 M~~~v~vv~~~ 228 (315)
T 1fft_B 218 MKFKAIATPDR 228 (315)
T ss_dssp CCEECCBCSST
T ss_pred ccceEEEecCH
Done!