Query 008112
Match_columns 577
No_of_seqs 214 out of 1634
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 18:24:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008112.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008112hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gr4_A Pyruvate kinase isozyme 100.0 9E-137 3E-141 1122.4 48.4 486 80-577 42-549 (550)
2 3khd_A Pyruvate kinase; malari 100.0 1E-135 4E-140 1107.1 44.1 472 103-577 41-519 (520)
3 4drs_A Pyruvate kinase; glycol 100.0 9E-135 3E-139 1105.4 48.6 473 102-577 38-525 (526)
4 3hqn_D Pyruvate kinase, PK; TI 100.0 2E-134 6E-139 1096.3 43.4 470 103-577 15-498 (499)
5 3gg8_A Pyruvate kinase; malari 100.0 8E-134 3E-138 1092.6 45.9 470 105-577 33-510 (511)
6 1e0t_A Pyruvate kinase, PK; ph 100.0 1E-132 3E-137 1079.3 51.6 465 107-577 1-470 (470)
7 3t05_A Pyruvate kinase, PK; te 100.0 2E-133 7E-138 1109.8 44.4 472 103-577 18-493 (606)
8 2e28_A Pyruvate kinase, PK; al 100.0 7E-130 2E-134 1083.7 47.3 468 107-577 2-474 (587)
9 3qtg_A Pyruvate kinase, PK; TI 100.0 3E-129 1E-133 1044.2 45.9 444 106-575 13-460 (461)
10 1a3w_A Pyruvate kinase; allost 100.0 3E-128 1E-132 1051.4 38.7 484 82-577 2-500 (500)
11 1izc_A Macrophomate synthase i 99.7 1.6E-18 5.4E-23 181.7 7.4 149 279-442 107-302 (339)
12 2v5j_A 2,4-dihydroxyhept-2-ENE 99.7 1.3E-16 4.5E-21 163.6 9.6 129 276-418 98-261 (287)
13 2vws_A YFAU, 2-keto-3-deoxy su 99.7 1.5E-16 5E-21 161.5 9.6 127 278-418 79-240 (267)
14 3qz6_A HPCH/HPAI aldolase; str 99.6 4.8E-16 1.6E-20 157.4 11.7 129 278-419 77-240 (261)
15 1dxe_A 2-dehydro-3-deoxy-galac 99.6 8.6E-16 2.9E-20 154.9 11.6 129 276-418 78-240 (256)
16 1sgj_A Citrate lyase, beta sub 99.6 6.5E-15 2.2E-19 150.4 9.5 132 276-414 81-220 (284)
17 2xz9_A Phosphoenolpyruvate-pro 99.3 4.6E-12 1.6E-16 132.0 9.2 133 272-415 118-277 (324)
18 3qll_A Citrate lyase; beta bar 99.2 2.7E-11 9.4E-16 125.7 8.8 133 275-414 113-255 (316)
19 1u5h_A CITE; TIM barrel, struc 99.1 9.5E-11 3.3E-15 119.2 9.5 125 275-414 70-208 (273)
20 3qqw_A Putative citrate lyase; 99.1 2.2E-10 7.6E-15 119.6 10.1 133 275-414 94-254 (332)
21 2ols_A Phosphoenolpyruvate syn 99.1 2E-10 6.9E-15 132.3 9.3 134 274-417 622-779 (794)
22 3r4i_A Citrate lyase; TIM beta 99.0 1.3E-09 4.6E-14 114.1 11.6 133 275-414 93-253 (339)
23 2hwg_A Phosphoenolpyruvate-pro 98.9 1.1E-09 3.8E-14 121.8 8.0 130 275-415 370-526 (575)
24 2wqd_A Phosphoenolpyruvate-pro 98.9 1.2E-09 4.1E-14 121.5 8.1 126 279-415 376-528 (572)
25 3oyz_A Malate synthase; TIM ba 98.8 6.5E-09 2.2E-13 111.3 8.9 133 275-414 94-258 (433)
26 1vbg_A Pyruvate,orthophosphate 98.3 2.3E-06 7.8E-11 99.4 12.9 118 289-417 701-862 (876)
27 1kbl_A PPDK, pyruvate phosphat 98.2 6.5E-06 2.2E-10 95.6 12.6 117 289-416 695-855 (873)
28 3cuz_A MSA, malate synthase A; 97.8 7.4E-05 2.5E-09 82.2 11.5 135 277-414 193-365 (532)
29 3cux_A Malate synthase; TIM ba 97.7 0.0001 3.5E-09 81.1 9.5 127 281-415 194-364 (528)
30 1p7t_A MSG, malate synthase G; 97.5 8E-05 2.7E-09 83.6 5.9 132 279-415 372-536 (731)
31 1h6z_A Pyruvate phosphate diki 97.2 0.0025 8.6E-08 74.3 13.7 136 270-416 698-881 (913)
32 2x0s_A Pyruvate phosphate diki 96.2 0.032 1.1E-06 65.4 13.6 113 292-415 727-880 (913)
33 4af0_A Inosine-5'-monophosphat 95.2 0.23 7.8E-06 54.8 14.5 125 275-415 279-413 (556)
34 3ffs_A Inosine-5-monophosphate 94.6 0.18 6.3E-06 53.7 11.4 119 279-415 146-275 (400)
35 3f4w_A Putative hexulose 6 pho 94.4 0.23 7.8E-06 47.1 10.7 138 281-437 69-209 (211)
36 3odm_A Pepcase, PEPC, phosphoe 94.0 0.074 2.5E-06 58.4 6.8 107 288-394 138-274 (560)
37 3usb_A Inosine-5'-monophosphat 93.8 0.44 1.5E-05 52.2 12.8 123 277-415 256-388 (511)
38 1jqo_A Phosphoenolpyruvate car 93.6 0.14 4.8E-06 60.0 8.6 113 283-395 519-653 (970)
39 4fxs_A Inosine-5'-monophosphat 93.5 0.47 1.6E-05 51.7 12.3 123 276-415 230-363 (496)
40 4fo4_A Inosine 5'-monophosphat 93.4 1.8 6.1E-05 45.5 16.0 123 276-415 107-240 (366)
41 3khj_A Inosine-5-monophosphate 92.9 1.5 5E-05 45.9 14.4 119 279-415 107-236 (361)
42 3ovp_A Ribulose-phosphate 3-ep 92.6 0.71 2.4E-05 45.2 10.9 140 280-439 78-221 (228)
43 4avf_A Inosine-5'-monophosphat 92.4 0.85 2.9E-05 49.6 12.4 123 276-415 228-361 (490)
44 1jqn_A Pepcase, PEPC, phosphoe 92.4 0.15 5.1E-06 59.4 6.6 153 289-441 468-641 (883)
45 1h1y_A D-ribulose-5-phosphate 92.0 1.3 4.4E-05 42.8 12.0 138 280-436 78-222 (228)
46 3igs_A N-acetylmannosamine-6-p 92.0 2.3 7.7E-05 41.7 13.8 136 278-438 90-230 (232)
47 1t57_A Conserved protein MTH16 91.8 0.9 3.1E-05 43.9 10.1 45 460-505 36-81 (206)
48 2qjg_A Putative aldolase MJ040 91.8 1.1 3.8E-05 44.2 11.4 42 123-164 102-145 (273)
49 3inp_A D-ribulose-phosphate 3- 91.7 0.81 2.8E-05 45.5 10.2 141 280-436 100-244 (246)
50 1ydn_A Hydroxymethylglutaryl-C 91.6 0.74 2.5E-05 46.4 10.0 155 274-438 23-197 (295)
51 3q58_A N-acetylmannosamine-6-p 91.5 2 6.8E-05 42.0 12.7 132 278-434 90-226 (229)
52 1y0e_A Putative N-acetylmannos 91.4 2.6 9.1E-05 40.0 13.3 137 278-433 77-219 (223)
53 3r2g_A Inosine 5'-monophosphat 91.2 1.3 4.4E-05 46.5 11.6 120 276-415 99-228 (361)
54 1jcn_A Inosine monophosphate d 91.1 3.5 0.00012 44.7 15.5 119 277-415 255-387 (514)
55 1vp8_A Hypothetical protein AF 91.0 1.8 6E-05 41.7 11.2 98 460-559 28-167 (201)
56 2z6i_A Trans-2-enoyl-ACP reduc 90.8 1.4 4.9E-05 45.1 11.4 111 280-415 79-191 (332)
57 3cu2_A Ribulose-5-phosphate 3- 90.7 1.9 6.5E-05 42.5 11.7 135 279-434 82-235 (237)
58 2c6q_A GMP reductase 2; TIM ba 90.5 2.4 8.3E-05 44.0 12.9 122 278-415 119-252 (351)
59 2fli_A Ribulose-phosphate 3-ep 90.4 2.9 9.9E-05 39.5 12.4 137 281-434 76-217 (220)
60 3ctl_A D-allulose-6-phosphate 90.4 2.3 7.8E-05 41.7 11.9 139 281-436 72-218 (231)
61 3bo9_A Putative nitroalkan dio 89.7 2.7 9.4E-05 43.0 12.3 112 279-415 92-205 (326)
62 3ajx_A 3-hexulose-6-phosphate 89.4 2.7 9.3E-05 39.4 11.3 132 282-433 70-204 (207)
63 3ble_A Citramalate synthase fr 89.2 2.5 8.6E-05 43.6 11.7 158 274-438 38-211 (337)
64 1w8s_A FBP aldolase, fructose- 88.9 4.7 0.00016 40.1 13.1 68 283-353 166-238 (263)
65 1tqj_A Ribulose-phosphate 3-ep 88.9 1.1 3.8E-05 43.7 8.3 138 280-433 76-219 (230)
66 1eep_A Inosine 5'-monophosphat 88.7 2.2 7.6E-05 44.9 11.1 121 277-415 153-285 (404)
67 3bw2_A 2-nitropropane dioxygen 88.3 7.8 0.00027 40.1 14.8 112 279-415 112-237 (369)
68 1gte_A Dihydropyrimidine dehyd 88.2 3.2 0.00011 49.0 13.1 118 283-415 655-816 (1025)
69 2ftp_A Hydroxymethylglutaryl-C 87.7 4.1 0.00014 41.2 11.9 160 274-438 27-201 (302)
70 1vrd_A Inosine-5'-monophosphat 87.5 3.5 0.00012 44.4 12.0 121 278-415 238-369 (494)
71 2gjl_A Hypothetical protein PA 86.5 6.2 0.00021 40.1 12.5 113 279-415 86-201 (328)
72 1f76_A Dihydroorotate dehydrog 86.2 6.8 0.00023 39.9 12.7 116 288-415 164-318 (336)
73 1h1y_A D-ribulose-5-phosphate 86.2 6.9 0.00023 37.6 12.1 134 279-438 22-171 (228)
74 3eeg_A 2-isopropylmalate synth 86.2 20 0.00067 36.8 16.2 158 274-439 25-194 (325)
75 1tqx_A D-ribulose-5-phosphate 85.2 2.5 8.7E-05 41.3 8.5 131 290-436 86-222 (227)
76 2yw3_A 4-hydroxy-2-oxoglutarat 85.1 9.5 0.00032 36.4 12.4 102 279-414 28-130 (207)
77 1wbh_A KHG/KDPG aldolase; lyas 84.8 11 0.00038 36.2 12.8 104 279-414 31-135 (214)
78 1w8s_A FBP aldolase, fructose- 84.6 8.2 0.00028 38.3 12.1 127 275-415 39-179 (263)
79 4g9p_A 4-hydroxy-3-methylbut-2 84.4 6.3 0.00022 41.8 11.5 152 281-439 43-223 (406)
80 2qjg_A Putative aldolase MJ040 84.2 26 0.0009 34.1 15.6 137 279-437 102-259 (273)
81 1yad_A Regulatory protein TENI 84.2 13 0.00045 35.2 13.0 132 283-437 82-214 (221)
82 1ypf_A GMP reductase; GUAC, pu 84.1 4.4 0.00015 41.6 10.2 121 276-415 105-239 (336)
83 3qja_A IGPS, indole-3-glycerol 83.9 9.1 0.00031 38.3 12.1 132 278-433 124-260 (272)
84 1mxs_A KDPG aldolase; 2-keto-3 83.6 12 0.00042 36.3 12.6 116 279-434 41-160 (225)
85 1ydo_A HMG-COA lyase; TIM-barr 83.6 6.1 0.00021 40.2 10.8 160 274-438 25-199 (307)
86 1rpx_A Protein (ribulose-phosp 83.4 11 0.00037 36.0 12.1 137 280-433 82-225 (230)
87 3vnd_A TSA, tryptophan synthas 83.2 4.4 0.00015 40.6 9.4 91 278-378 34-152 (267)
88 1vhc_A Putative KHG/KDPG aldol 83.1 11 0.00038 36.6 12.0 104 279-414 32-136 (224)
89 2cw6_A Hydroxymethylglutaryl-C 82.9 2.8 9.7E-05 42.3 8.0 160 274-438 24-198 (298)
90 3tsm_A IGPS, indole-3-glycerol 82.7 15 0.00052 36.9 13.1 128 280-432 133-266 (272)
91 3nvt_A 3-deoxy-D-arabino-heptu 82.4 11 0.00038 39.8 12.5 112 280-415 160-283 (385)
92 2qr6_A IMP dehydrogenase/GMP r 82.1 8.1 0.00028 40.3 11.4 113 282-415 171-306 (393)
93 1geq_A Tryptophan synthase alp 81.9 23 0.0008 33.9 13.9 120 279-415 98-220 (248)
94 4e38_A Keto-hydroxyglutarate-a 81.6 4.6 0.00016 39.7 8.7 37 364-414 117-153 (232)
95 3jr2_A Hexulose-6-phosphate sy 81.5 3.1 0.00011 39.8 7.3 139 281-437 75-215 (218)
96 1n7k_A Deoxyribose-phosphate a 80.6 13 0.00045 36.5 11.6 141 272-436 31-192 (234)
97 1jub_A Dihydroorotate dehydrog 80.6 16 0.00055 36.5 12.6 122 280-415 110-271 (311)
98 3g8r_A Probable spore coat pol 80.4 13 0.00043 38.9 11.9 97 300-424 76-174 (350)
99 2cu0_A Inosine-5'-monophosphat 80.3 22 0.00075 38.2 14.3 118 279-415 230-357 (486)
100 1zco_A 2-dehydro-3-deoxyphosph 79.7 29 0.001 34.4 14.0 124 279-426 40-177 (262)
101 3ewb_X 2-isopropylmalate synth 79.6 48 0.0016 33.3 15.7 154 274-438 24-192 (293)
102 1me8_A Inosine-5'-monophosphat 79.5 25 0.00086 38.0 14.5 121 279-415 244-381 (503)
103 1p1x_A Deoxyribose-phosphate a 79.4 13 0.00046 37.0 11.3 149 272-438 23-193 (260)
104 2wqp_A Polysialic acid capsule 78.6 42 0.0014 34.9 15.1 119 279-425 38-188 (349)
105 1yxy_A Putative N-acetylmannos 77.9 17 0.00057 34.7 11.3 132 278-434 90-231 (234)
106 1ka9_F Imidazole glycerol phos 77.5 17 0.00058 34.9 11.3 134 278-431 86-242 (252)
107 1q6o_A Humps, 3-keto-L-gulonat 77.3 15 0.0005 34.9 10.6 137 284-437 75-213 (216)
108 3rmj_A 2-isopropylmalate synth 76.5 49 0.0017 34.5 15.2 159 273-439 30-200 (370)
109 2nv1_A Pyridoxal biosynthesis 76.3 18 0.00061 36.4 11.4 128 280-438 32-174 (305)
110 1zfj_A Inosine monophosphate d 76.0 43 0.0015 35.7 15.0 123 277-415 233-365 (491)
111 1vcv_A Probable deoxyribose-ph 75.7 2.7 9.4E-05 41.2 5.0 142 272-439 12-182 (226)
112 2tps_A Protein (thiamin phosph 74.4 25 0.00085 33.1 11.3 128 282-438 87-223 (227)
113 3i65_A Dihydroorotate dehydrog 74.4 41 0.0014 35.8 14.0 139 286-442 208-396 (415)
114 3m47_A Orotidine 5'-phosphate 74.2 16 0.00056 35.4 10.1 131 281-436 83-223 (228)
115 1thf_D HISF protein; thermophI 73.5 13 0.00044 35.8 9.2 135 277-431 84-241 (253)
116 1xi3_A Thiamine phosphate pyro 73.2 27 0.00092 32.4 11.2 132 281-437 78-212 (215)
117 3daq_A DHDPS, dihydrodipicolin 73.0 19 0.00066 36.1 10.7 96 281-380 28-134 (292)
118 3zwt_A Dihydroorotate dehydrog 72.9 42 0.0014 34.9 13.5 149 276-442 160-349 (367)
119 3ivs_A Homocitrate synthase, m 72.8 77 0.0026 33.7 15.7 164 259-438 48-222 (423)
120 3nav_A Tryptophan synthase alp 72.2 20 0.00068 35.9 10.4 118 280-415 116-237 (271)
121 3vnd_A TSA, tryptophan synthas 72.1 16 0.00056 36.4 9.7 119 279-415 113-235 (267)
122 3cqj_A L-ribulose-5-phosphate 71.6 59 0.002 31.4 13.6 132 280-418 34-197 (295)
123 3fkr_A L-2-keto-3-deoxyarabona 71.5 15 0.00052 37.2 9.5 98 281-381 34-144 (309)
124 2v82_A 2-dehydro-3-deoxy-6-pho 71.1 42 0.0014 31.3 12.0 111 272-414 11-127 (212)
125 1nvm_A HOA, 4-hydroxy-2-oxoval 71.0 66 0.0023 32.9 14.4 150 273-438 26-191 (345)
126 3qja_A IGPS, indole-3-glycerol 70.7 22 0.00077 35.5 10.4 109 277-416 72-190 (272)
127 1vzw_A Phosphoribosyl isomeras 70.6 7.3 0.00025 37.4 6.7 128 278-423 33-174 (244)
128 3glc_A Aldolase LSRF; TIM barr 70.3 49 0.0017 33.5 12.9 132 281-437 130-279 (295)
129 1wa3_A 2-keto-3-deoxy-6-phosph 69.8 39 0.0013 31.3 11.4 99 283-415 29-131 (205)
130 2v82_A 2-dehydro-3-deoxy-6-pho 69.6 49 0.0017 30.8 12.1 130 279-440 70-205 (212)
131 3b4u_A Dihydrodipicolinate syn 69.1 29 0.00098 34.8 10.9 98 280-380 28-139 (294)
132 2p4v_A Transcription elongatio 68.9 3.3 0.00011 38.3 3.5 129 70-242 4-154 (158)
133 3q58_A N-acetylmannosamine-6-p 68.3 36 0.0012 33.0 11.0 111 275-414 34-155 (229)
134 1grj_A GREA protein; transcrip 68.2 1.2 4.1E-05 41.3 0.3 129 70-242 4-156 (158)
135 3qze_A DHDPS, dihydrodipicolin 67.9 22 0.00075 36.2 9.8 96 281-380 49-155 (314)
136 3kws_A Putative sugar isomeras 67.7 44 0.0015 32.2 11.7 144 280-430 42-215 (287)
137 1ep3_A Dihydroorotate dehydrog 67.6 53 0.0018 32.4 12.5 113 288-416 124-271 (311)
138 3igs_A N-acetylmannosamine-6-p 67.2 48 0.0016 32.1 11.7 111 275-414 34-155 (232)
139 1ub3_A Aldolase protein; schif 67.1 4 0.00014 39.8 3.9 144 272-435 14-173 (220)
140 1o4u_A Type II quinolic acid p 66.4 6.9 0.00023 39.7 5.6 65 278-347 202-269 (285)
141 3nav_A Tryptophan synthase alp 66.3 35 0.0012 34.1 10.7 149 264-435 23-204 (271)
142 4fxs_A Inosine-5'-monophosphat 66.3 8.9 0.00031 41.6 6.9 50 109-158 219-268 (496)
143 3l21_A DHDPS, dihydrodipicolin 66.3 19 0.00065 36.4 8.9 96 281-380 41-147 (304)
144 1vs1_A 3-deoxy-7-phosphoheptul 66.2 98 0.0034 30.9 14.1 124 282-429 58-195 (276)
145 1f6k_A N-acetylneuraminate lya 65.9 47 0.0016 33.2 11.7 97 280-380 28-136 (293)
146 2k8i_A SLYD, peptidyl-prolyl C 65.8 20 0.00068 33.4 8.3 60 189-248 51-119 (171)
147 3dx5_A Uncharacterized protein 65.5 65 0.0022 30.8 12.4 121 280-405 19-162 (286)
148 1tv5_A Dhodehase, dihydroorota 65.5 66 0.0022 34.4 13.3 87 317-415 296-402 (443)
149 1vyr_A Pentaerythritol tetrani 65.3 57 0.0019 33.8 12.5 123 273-415 150-323 (364)
150 2wkj_A N-acetylneuraminate lya 65.2 43 0.0015 33.7 11.3 97 280-380 36-144 (303)
151 3m5v_A DHDPS, dihydrodipicolin 65.1 26 0.00088 35.3 9.6 96 281-380 33-140 (301)
152 1wa3_A 2-keto-3-deoxy-6-phosph 64.6 63 0.0021 29.8 11.7 126 278-437 72-202 (205)
153 3o63_A Probable thiamine-phosp 64.4 36 0.0012 33.4 10.3 126 284-437 107-241 (243)
154 1qpo_A Quinolinate acid phosph 64.2 16 0.00055 36.9 7.8 64 279-347 204-270 (284)
155 3s5o_A 4-hydroxy-2-oxoglutarat 64.1 30 0.001 35.0 9.9 98 281-381 40-149 (307)
156 1vzw_A Phosphoribosyl isomeras 63.8 31 0.0011 32.9 9.6 133 278-431 86-239 (244)
157 3hgj_A Chromate reductase; TIM 63.5 41 0.0014 34.5 11.0 129 273-415 141-318 (349)
158 3ngj_A Deoxyribose-phosphate a 63.4 30 0.001 34.1 9.4 145 272-435 38-197 (239)
159 1wv2_A Thiazole moeity, thiazo 63.4 1.2E+02 0.0041 30.4 13.7 131 288-439 101-240 (265)
160 2czd_A Orotidine 5'-phosphate 63.3 38 0.0013 31.8 9.9 127 280-435 69-205 (208)
161 2gou_A Oxidoreductase, FMN-bin 63.1 44 0.0015 34.6 11.2 120 273-415 150-322 (365)
162 1at0_A 17-hedgehog; developmen 62.9 20 0.00068 32.3 7.5 63 188-256 58-134 (145)
163 2r8w_A AGR_C_1641P; APC7498, d 62.9 42 0.0015 34.3 10.9 97 280-380 59-166 (332)
164 2v9d_A YAGE; dihydrodipicolini 62.9 23 0.00079 36.5 8.9 97 280-380 56-163 (343)
165 2yxg_A DHDPS, dihydrodipicolin 62.8 36 0.0012 34.0 10.2 97 280-380 25-132 (289)
166 3e96_A Dihydrodipicolinate syn 62.7 32 0.0011 34.9 9.8 97 281-381 38-144 (316)
167 2e6f_A Dihydroorotate dehydrog 62.7 34 0.0012 34.1 10.0 122 282-416 112-274 (314)
168 3f4w_A Putative hexulose 6 pho 61.9 19 0.00065 33.6 7.5 106 287-415 23-134 (211)
169 1h5y_A HISF; histidine biosynt 61.9 49 0.0017 31.1 10.5 134 278-431 88-244 (253)
170 1vc4_A Indole-3-glycerol phosp 61.7 32 0.0011 33.9 9.4 131 278-431 117-252 (254)
171 4fo4_A Inosine 5'-monophosphat 61.4 13 0.00045 38.8 6.8 48 111-158 98-145 (366)
172 1to3_A Putative aldolase YIHT; 61.3 57 0.002 33.0 11.4 76 282-357 183-265 (304)
173 2y88_A Phosphoribosyl isomeras 61.2 39 0.0013 32.1 9.8 118 278-415 85-225 (244)
174 2ehh_A DHDPS, dihydrodipicolin 61.1 39 0.0013 33.8 10.1 97 280-380 25-132 (294)
175 3oa3_A Aldolase; structural ge 61.0 14 0.00047 37.6 6.6 145 272-437 69-230 (288)
176 2h6r_A Triosephosphate isomera 60.8 53 0.0018 31.4 10.6 130 283-431 76-215 (219)
177 3cpr_A Dihydrodipicolinate syn 60.5 53 0.0018 33.1 11.0 97 280-380 41-148 (304)
178 2ekc_A AQ_1548, tryptophan syn 60.4 51 0.0017 32.4 10.6 118 279-415 112-234 (262)
179 1mzh_A Deoxyribose-phosphate a 60.2 59 0.002 31.2 10.8 144 272-433 15-170 (225)
180 2rfg_A Dihydrodipicolinate syn 60.1 35 0.0012 34.3 9.5 97 280-380 25-132 (297)
181 1x1o_A Nicotinate-nucleotide p 60.0 18 0.00063 36.5 7.4 65 277-347 204-269 (286)
182 3si9_A DHDPS, dihydrodipicolin 60.0 26 0.0009 35.6 8.7 96 281-380 48-154 (315)
183 2yr1_A 3-dehydroquinate dehydr 59.9 36 0.0012 33.6 9.4 121 280-415 36-176 (257)
184 1qop_A Tryptophan synthase alp 59.4 46 0.0016 32.7 10.1 119 279-415 112-234 (268)
185 1xky_A Dihydrodipicolinate syn 59.2 35 0.0012 34.4 9.3 96 281-380 38-144 (301)
186 2qr6_A IMP dehydrogenase/GMP r 59.1 18 0.00062 37.7 7.4 73 278-354 221-314 (393)
187 3lab_A Putative KDPG (2-keto-3 59.1 41 0.0014 32.7 9.4 100 284-415 33-139 (217)
188 1rpx_A Protein (ribulose-phosp 58.9 53 0.0018 31.1 10.2 111 279-414 26-146 (230)
189 2w6r_A Imidazole glycerol phos 58.9 50 0.0017 31.8 10.2 128 277-422 84-236 (266)
190 1rd5_A Tryptophan synthase alp 58.7 1.1E+02 0.0039 29.4 12.8 92 277-379 33-148 (262)
191 3dz1_A Dihydrodipicolinate syn 58.6 61 0.0021 32.7 11.1 95 280-380 33-140 (313)
192 1vr6_A Phospho-2-dehydro-3-deo 58.3 1.4E+02 0.0048 30.9 13.9 109 282-414 126-246 (350)
193 3khj_A Inosine-5-monophosphate 58.3 14 0.00047 38.5 6.3 45 112-158 98-142 (361)
194 1z41_A YQJM, probable NADH-dep 58.2 49 0.0017 33.7 10.4 128 273-415 133-307 (338)
195 3flu_A DHDPS, dihydrodipicolin 57.5 46 0.0016 33.4 9.9 96 281-380 33-139 (297)
196 2vc6_A MOSA, dihydrodipicolina 57.4 40 0.0014 33.7 9.4 97 280-380 25-132 (292)
197 1eep_A Inosine 5'-monophosphat 57.0 13 0.00044 39.0 5.9 50 109-158 141-190 (404)
198 2kfw_A FKBP-type peptidyl-prol 56.7 11 0.00036 36.2 4.7 60 189-248 51-119 (196)
199 3tak_A DHDPS, dihydrodipicolin 56.4 47 0.0016 33.2 9.7 97 280-380 26-133 (291)
200 3i65_A Dihydroorotate dehydrog 56.2 18 0.0006 38.6 6.7 100 272-376 278-402 (415)
201 1o5k_A DHDPS, dihydrodipicolin 56.0 45 0.0015 33.6 9.5 96 281-380 38-144 (306)
202 3na8_A Putative dihydrodipicol 56.0 35 0.0012 34.6 8.8 96 281-380 50-156 (315)
203 1kbi_A Cytochrome B2, L-LCR; f 55.6 39 0.0013 36.8 9.5 95 300-415 331-432 (511)
204 3d0c_A Dihydrodipicolinate syn 55.6 39 0.0013 34.2 9.1 96 281-380 38-143 (314)
205 3r12_A Deoxyribose-phosphate a 55.6 24 0.00084 35.2 7.3 146 272-435 54-213 (260)
206 3iwp_A Copper homeostasis prot 55.6 1.5E+02 0.0051 30.0 13.1 143 276-440 46-208 (287)
207 3kts_A Glycerol uptake operon 55.6 7.3 0.00025 37.3 3.3 127 276-417 16-181 (192)
208 2r14_A Morphinone reductase; H 55.0 1.1E+02 0.0038 31.8 12.6 124 273-415 155-328 (377)
209 2kr7_A FKBP-type peptidyl-prol 54.8 48 0.0017 29.9 8.7 61 189-249 56-125 (151)
210 3qfe_A Putative dihydrodipicol 54.7 53 0.0018 33.3 9.9 97 281-380 37-145 (318)
211 3usb_A Inosine-5'-monophosphat 54.4 16 0.00056 39.7 6.3 52 107-158 242-293 (511)
212 3cgm_A SLYD, peptidyl-prolyl C 54.4 46 0.0016 30.5 8.5 59 190-248 47-115 (158)
213 4ef8_A Dihydroorotate dehydrog 54.2 61 0.0021 33.6 10.3 116 287-415 153-306 (354)
214 3b0p_A TRNA-dihydrouridine syn 54.0 80 0.0027 32.4 11.2 117 280-415 74-225 (350)
215 3tha_A Tryptophan synthase alp 53.7 60 0.0021 32.1 9.8 117 280-415 107-227 (252)
216 3ndz_A Endoglucanase D; cellot 53.6 28 0.00096 35.5 7.6 58 120-177 42-106 (345)
217 2nli_A Lactate oxidase; flavoe 53.6 22 0.00075 37.0 6.9 63 278-347 239-314 (368)
218 1h5y_A HISF; histidine biosynt 53.4 33 0.0011 32.4 7.6 84 279-377 157-251 (253)
219 3l5l_A Xenobiotic reductase A; 52.9 45 0.0015 34.4 9.1 129 273-415 147-325 (363)
220 1jcn_A Inosine monophosphate d 52.8 16 0.00054 39.5 5.9 49 110-158 244-292 (514)
221 4dt4_A FKBP-type 16 kDa peptid 52.7 46 0.0016 30.9 8.3 61 189-249 74-144 (169)
222 2y88_A Phosphoribosyl isomeras 52.1 27 0.00092 33.3 6.8 64 281-350 36-107 (244)
223 2uva_G Fatty acid synthase bet 52.0 49 0.0017 42.2 10.7 120 279-414 656-794 (2060)
224 1tvn_A Cellulase, endoglucanas 51.4 26 0.0009 34.3 6.8 53 121-176 39-101 (293)
225 1ve1_A O-acetylserine sulfhydr 51.4 1.2E+02 0.0041 29.9 11.8 119 365-508 76-204 (304)
226 3dwg_A Cysteine synthase B; su 51.1 93 0.0032 31.3 11.0 124 363-507 85-214 (325)
227 4h3d_A 3-dehydroquinate dehydr 50.9 96 0.0033 30.5 10.8 136 282-434 38-192 (258)
228 3ngf_A AP endonuclease, family 50.7 1.2E+02 0.0041 28.8 11.4 123 276-405 22-175 (269)
229 3l6b_A Serine racemase; pyrido 50.6 1.6E+02 0.0055 29.8 12.9 119 364-507 89-213 (346)
230 2hmc_A AGR_L_411P, dihydrodipi 50.4 72 0.0025 32.8 10.2 95 281-380 52-157 (344)
231 4avf_A Inosine-5'-monophosphat 50.4 22 0.00074 38.5 6.5 50 109-158 217-266 (490)
232 2gn0_A Threonine dehydratase c 50.3 1.6E+02 0.0056 29.6 12.8 119 364-507 101-225 (342)
233 2ojp_A DHDPS, dihydrodipicolin 49.9 34 0.0012 34.2 7.5 97 280-380 26-133 (292)
234 3exr_A RMPD (hexulose-6-phosph 49.8 1.1E+02 0.0036 29.3 10.7 133 285-436 78-217 (221)
235 1xm3_A Thiazole biosynthesis p 49.6 1.3E+02 0.0044 29.5 11.5 95 332-442 139-234 (264)
236 2o55_A Putative glycerophospho 49.4 43 0.0015 32.4 7.9 112 291-436 143-258 (258)
237 3ks6_A Glycerophosphoryl diest 49.1 47 0.0016 32.1 8.1 107 291-436 134-246 (250)
238 2aam_A Hypothetical protein TM 49.0 95 0.0032 31.6 10.6 92 282-380 128-246 (309)
239 1o66_A 3-methyl-2-oxobutanoate 49.0 2.2E+02 0.0075 28.5 13.8 147 272-439 20-196 (275)
240 3gr7_A NADPH dehydrogenase; fl 49.0 1.6E+02 0.0053 30.1 12.4 128 273-415 133-307 (340)
241 3icg_A Endoglucanase D; cellul 48.6 34 0.0012 36.8 7.7 57 121-177 46-109 (515)
242 3inp_A D-ribulose-phosphate 3- 48.6 81 0.0028 31.0 9.8 131 280-436 44-190 (246)
243 1rd5_A Tryptophan synthase alp 48.2 1.2E+02 0.0042 29.2 11.0 114 285-415 114-230 (262)
244 2d73_A Alpha-glucosidase SUSB; 48.0 1.1E+02 0.0036 35.1 11.7 102 275-379 370-506 (738)
245 1yad_A Regulatory protein TENI 47.9 72 0.0024 29.9 9.0 86 278-373 119-215 (221)
246 3ctl_A D-allulose-6-phosphate 47.8 1.1E+02 0.0037 29.6 10.5 130 281-438 18-161 (231)
247 1vc4_A Indole-3-glycerol phosp 47.8 39 0.0013 33.3 7.3 67 277-347 162-237 (254)
248 1vli_A Spore coat polysacchari 47.7 58 0.002 34.3 9.0 55 340-414 135-191 (385)
249 1ujp_A Tryptophan synthase alp 47.7 36 0.0012 33.9 7.2 116 280-415 110-229 (271)
250 2r91_A 2-keto-3-deoxy-(6-phosp 47.7 1.2E+02 0.0041 30.0 11.1 96 280-380 23-128 (286)
251 2nzl_A Hydroxyacid oxidase 1; 47.5 29 0.00098 36.5 6.7 62 279-347 263-337 (392)
252 3bdk_A D-mannonate dehydratase 47.3 1.1E+02 0.0037 32.1 11.0 65 275-339 29-112 (386)
253 2kct_A Cytochrome C-type bioge 47.1 75 0.0026 26.8 7.9 55 175-229 7-65 (94)
254 1p0k_A Isopentenyl-diphosphate 47.1 90 0.0031 31.7 10.2 30 374-415 251-280 (349)
255 3vav_A 3-methyl-2-oxobutanoate 47.1 2.3E+02 0.008 28.3 14.4 132 271-415 31-193 (275)
256 1y0e_A Putative N-acetylmannos 47.0 1.8E+02 0.0061 27.0 15.1 127 283-437 30-173 (223)
257 2b7n_A Probable nicotinate-nuc 46.9 43 0.0015 33.3 7.6 65 278-347 191-258 (273)
258 3q94_A Fructose-bisphosphate a 46.6 52 0.0018 33.3 8.1 103 315-424 78-188 (288)
259 3tsm_A IGPS, indole-3-glycerol 46.5 1.7E+02 0.0059 29.1 11.9 108 277-415 79-196 (272)
260 2ztj_A Homocitrate synthase; ( 46.4 2.7E+02 0.0092 28.8 16.3 155 273-437 21-185 (382)
261 2zbt_A Pyridoxal biosynthesis 46.0 67 0.0023 31.7 8.9 126 279-437 31-173 (297)
262 1egz_A Endoglucanase Z, EGZ, C 46.0 30 0.001 33.8 6.2 53 121-176 39-99 (291)
263 1p5j_A L-serine dehydratase; l 46.0 1.5E+02 0.0052 30.4 11.9 119 365-507 107-233 (372)
264 2nuw_A 2-keto-3-deoxygluconate 45.7 1.1E+02 0.0039 30.2 10.6 96 280-380 24-129 (288)
265 1yx1_A Hypothetical protein PA 45.6 94 0.0032 29.5 9.6 37 280-317 27-66 (264)
266 3sz8_A 2-dehydro-3-deoxyphosph 45.5 1.6E+02 0.0053 29.8 11.4 108 287-418 49-171 (285)
267 1to3_A Putative aldolase YIHT; 45.5 2.3E+02 0.0077 28.5 12.8 59 373-440 220-291 (304)
268 3pc3_A CG1753, isoform A; CBS, 45.2 1E+02 0.0035 33.2 10.8 127 364-508 126-259 (527)
269 4adt_A Pyridoxine biosynthetic 45.2 1.1E+02 0.0039 30.8 10.5 124 280-438 32-174 (297)
270 3iwp_A Copper homeostasis prot 45.0 1.8E+02 0.006 29.5 11.7 119 280-417 115-240 (287)
271 2gjl_A Hypothetical protein PA 44.9 2.5E+02 0.0085 28.0 15.8 114 278-418 28-148 (328)
272 1gox_A (S)-2-hydroxy-acid oxid 44.5 30 0.001 35.9 6.2 65 279-347 236-310 (370)
273 3fs2_A 2-dehydro-3-deoxyphosph 44.3 1.8E+02 0.0062 29.5 11.7 106 287-416 70-190 (298)
274 1vhk_A Hypothetical protein YQ 44.3 64 0.0022 32.0 8.4 120 220-346 36-175 (268)
275 3a5f_A Dihydrodipicolinate syn 44.2 42 0.0014 33.5 7.1 97 280-380 26-133 (291)
276 4e8b_A Ribosomal RNA small sub 44.1 64 0.0022 31.7 8.2 70 221-294 34-108 (251)
277 1edg_A Endoglucanase A; family 44.0 20 0.00068 36.8 4.7 58 120-177 61-124 (380)
278 1qop_A Tryptophan synthase alp 43.8 2.4E+02 0.0081 27.5 13.1 91 279-379 34-152 (268)
279 1y7l_A O-acetylserine sulfhydr 43.6 2E+02 0.0069 28.4 12.1 121 365-508 76-207 (316)
280 3lmz_A Putative sugar isomeras 43.6 1.6E+02 0.0055 27.7 10.9 89 279-379 33-131 (257)
281 3o1n_A 3-dehydroquinate dehydr 43.6 1.4E+02 0.0047 29.7 10.7 142 278-437 121-275 (276)
282 3l55_A B-1,4-endoglucanase/cel 43.2 37 0.0013 35.0 6.6 55 120-177 52-114 (353)
283 2nli_A Lactate oxidase; flavoe 43.2 72 0.0025 33.1 8.9 95 300-415 217-313 (368)
284 3m5v_A DHDPS, dihydrodipicolin 43.1 1.3E+02 0.0045 30.0 10.6 148 340-506 42-196 (301)
285 3sgz_A Hydroxyacid oxidase 2; 43.0 40 0.0014 35.0 6.8 67 279-349 228-304 (352)
286 1w3i_A EDA, 2-keto-3-deoxy glu 42.9 1.3E+02 0.0045 29.9 10.5 96 280-380 24-129 (293)
287 3eb2_A Putative dihydrodipicol 42.6 43 0.0015 33.7 6.8 96 281-380 30-136 (300)
288 3o1n_A 3-dehydroquinate dehydr 42.5 1.5E+02 0.0051 29.5 10.7 119 283-415 59-196 (276)
289 2oog_A Glycerophosphoryl diest 42.4 2E+02 0.007 28.0 11.8 104 291-432 172-279 (287)
290 1tdj_A Biosynthetic threonine 42.2 3.5E+02 0.012 29.4 14.4 118 365-507 93-216 (514)
291 3tva_A Xylose isomerase domain 42.1 2.3E+02 0.008 26.9 14.0 100 280-379 25-157 (290)
292 3h5d_A DHDPS, dihydrodipicolin 41.9 67 0.0023 32.5 8.2 97 280-380 32-140 (311)
293 3tml_A 2-dehydro-3-deoxyphosph 41.7 2.4E+02 0.0082 28.4 12.1 108 287-418 46-174 (288)
294 3noy_A 4-hydroxy-3-methylbut-2 41.7 3.3E+02 0.011 28.5 15.8 138 280-437 50-202 (366)
295 1sfl_A 3-dehydroquinate dehydr 41.7 1.4E+02 0.0049 28.8 10.3 124 280-415 21-162 (238)
296 3ndo_A Deoxyribose-phosphate a 41.5 48 0.0016 32.5 6.7 147 272-435 24-187 (231)
297 1mdl_A Mandelate racemase; iso 41.3 51 0.0018 33.5 7.3 60 109-174 133-196 (359)
298 3kru_A NADH:flavin oxidoreduct 41.3 1.3E+02 0.0043 30.9 10.3 129 273-415 132-307 (343)
299 3ayr_A Endoglucanase; TIM barr 41.3 27 0.00094 35.8 5.3 57 120-176 62-125 (376)
300 2q3b_A Cysteine synthase A; py 41.1 2.3E+02 0.0078 28.0 12.0 122 365-508 81-210 (313)
301 2a4a_A Deoxyribose-phosphate a 40.4 89 0.003 31.5 8.7 150 272-438 43-215 (281)
302 1h1n_A Endo type cellulase ENG 40.3 22 0.00074 35.3 4.2 21 122-142 33-53 (305)
303 3sgz_A Hydroxyacid oxidase 2; 40.1 1.5E+02 0.0052 30.6 10.7 94 300-415 205-301 (352)
304 1i60_A IOLI protein; beta barr 40.0 1.8E+02 0.0062 27.2 10.7 39 280-318 18-62 (278)
305 3tbh_A O-acetyl serine sulfhyd 40.0 1.9E+02 0.0064 29.2 11.3 124 363-507 84-214 (334)
306 2pqm_A Cysteine synthase; OASS 39.5 1.6E+02 0.0054 29.8 10.7 122 365-508 92-221 (343)
307 4af0_A Inosine-5'-monophosphat 39.0 26 0.0009 38.6 4.8 51 108-158 268-318 (556)
308 2nzl_A Hydroxyacid oxidase 1; 38.9 41 0.0014 35.3 6.2 96 300-416 240-337 (392)
309 1m3u_A 3-methyl-2-oxobutanoate 38.7 3.1E+02 0.01 27.3 13.4 146 272-439 20-196 (264)
310 4djd_D C/Fe-SP, corrinoid/iron 38.7 1.6E+02 0.0056 30.1 10.5 150 276-438 141-317 (323)
311 3bo9_A Putative nitroalkan dio 38.6 3.2E+02 0.011 27.4 17.1 133 277-437 38-174 (326)
312 3zwt_A Dihydroorotate dehydrog 38.4 62 0.0021 33.6 7.4 99 272-375 229-354 (367)
313 3ovp_A Ribulose-phosphate 3-ep 38.0 64 0.0022 31.1 7.0 116 280-422 21-149 (228)
314 2zbt_A Pyridoxal biosynthesis 37.9 24 0.00084 35.0 4.1 140 279-436 90-259 (297)
315 1vrd_A Inosine-5'-monophosphat 37.8 40 0.0014 36.0 6.1 48 111-158 227-274 (494)
316 2z6i_A Trans-2-enoyl-ACP reduc 37.7 3.2E+02 0.011 27.3 15.4 110 278-416 25-138 (332)
317 1jub_A Dihydroorotate dehydrog 37.7 2.2E+02 0.0077 28.0 11.3 133 276-418 23-195 (311)
318 1tqj_A Ribulose-phosphate 3-ep 37.6 72 0.0025 30.6 7.3 143 272-439 9-168 (230)
319 4eiv_A Deoxyribose-phosphate a 37.5 69 0.0023 32.6 7.3 153 272-438 37-209 (297)
320 2yci_X 5-methyltetrahydrofolat 37.4 38 0.0013 33.8 5.4 52 125-179 39-90 (271)
321 3nl6_A Thiamine biosynthetic b 36.8 3.2E+02 0.011 29.8 13.1 138 280-436 76-230 (540)
322 3a24_A Alpha-galactosidase; gl 36.8 1.2E+02 0.0042 34.0 9.9 99 275-379 308-423 (641)
323 2jbm_A Nicotinate-nucleotide p 36.7 67 0.0023 32.5 7.2 64 279-347 207-273 (299)
324 1ece_A Endocellulase E1; glyco 36.6 34 0.0011 34.4 5.0 20 123-142 47-66 (358)
325 3l12_A Putative glycerophospho 36.5 1.6E+02 0.0054 29.3 10.0 105 291-433 182-307 (313)
326 1thf_D HISF protein; thermophI 36.5 1.5E+02 0.0052 28.0 9.5 68 278-350 31-107 (253)
327 2q02_A Putative cytoplasmic pr 36.5 2.7E+02 0.0092 26.0 13.2 40 279-318 22-67 (272)
328 3ih1_A Methylisocitrate lyase; 36.5 1.9E+02 0.0065 29.3 10.5 111 282-414 110-242 (305)
329 3oix_A Putative dihydroorotate 36.5 2.4E+02 0.0083 28.9 11.5 137 287-441 152-325 (345)
330 1jw9_B Molybdopterin biosynthe 36.4 1.1E+02 0.0039 29.5 8.6 66 304-380 87-152 (249)
331 4dpp_A DHDPS 2, dihydrodipicol 36.3 92 0.0031 32.4 8.3 94 281-380 85-189 (360)
332 2yw3_A 4-hydroxy-2-oxoglutarat 36.3 2.5E+02 0.0085 26.3 10.8 104 279-418 73-182 (207)
333 2g0w_A LMO2234 protein; putati 36.1 1.7E+02 0.0057 28.3 9.9 38 280-317 40-83 (296)
334 2rkb_A Serine dehydratase-like 35.9 3.1E+02 0.011 27.0 12.1 118 365-507 68-193 (318)
335 1v71_A Serine racemase, hypoth 35.6 2.2E+02 0.0074 28.4 10.8 119 364-507 87-211 (323)
336 1aj0_A DHPS, dihydropteroate s 35.5 64 0.0022 32.4 6.7 68 109-179 14-102 (282)
337 2gdq_A YITF; mandelate racemas 35.4 90 0.0031 32.1 8.1 46 125-174 146-191 (382)
338 1z7w_A Cysteine synthase; tran 35.2 2.5E+02 0.0084 27.9 11.2 123 365-508 81-210 (322)
339 1pii_A N-(5'phosphoribosyl)ant 35.2 52 0.0018 35.3 6.4 120 270-415 157-282 (452)
340 2ovl_A Putative racemase; stru 34.9 55 0.0019 33.5 6.4 67 301-380 231-299 (371)
341 4h27_A L-serine dehydratase/L- 34.6 1.8E+02 0.0062 29.7 10.2 119 364-506 106-232 (364)
342 1ep3_A Dihydroorotate dehydrog 34.6 65 0.0022 31.7 6.7 88 280-375 180-296 (311)
343 3ffs_A Inosine-5-monophosphate 34.6 34 0.0012 36.2 4.8 43 114-158 139-181 (400)
344 3sr7_A Isopentenyl-diphosphate 34.6 1E+02 0.0035 32.0 8.4 55 374-442 278-337 (365)
345 1vcf_A Isopentenyl-diphosphate 34.6 66 0.0023 32.5 6.8 57 374-442 256-314 (332)
346 1zcc_A Glycerophosphodiester p 34.5 1.5E+02 0.0053 28.3 9.2 104 291-435 129-236 (248)
347 3vkj_A Isopentenyl-diphosphate 34.4 1.4E+02 0.0049 30.9 9.5 57 374-442 267-325 (368)
348 4dbe_A Orotidine 5'-phosphate 34.2 54 0.0018 31.6 5.8 83 279-368 125-209 (222)
349 3p6l_A Sugar phosphate isomera 34.1 3E+02 0.01 25.8 11.7 89 279-379 25-133 (262)
350 1xg4_A Probable methylisocitra 34.0 94 0.0032 31.4 7.7 65 279-348 170-237 (295)
351 1nu5_A Chloromuconate cycloiso 34.0 64 0.0022 32.9 6.7 45 126-174 150-195 (370)
352 3apt_A Methylenetetrahydrofola 33.8 50 0.0017 33.5 5.7 62 277-338 161-222 (310)
353 1vhy_A Hypothetical protein HI 33.8 91 0.0031 30.7 7.5 71 220-294 35-110 (257)
354 1yxy_A Putative N-acetylmannos 33.8 3E+02 0.01 25.7 11.2 111 272-412 29-157 (234)
355 3qvq_A Phosphodiesterase OLEI0 33.8 73 0.0025 30.8 6.7 102 291-432 145-248 (252)
356 4aec_A Cysteine synthase, mito 33.4 2E+02 0.0069 30.5 10.6 124 364-508 188-318 (430)
357 2cks_A Endoglucanase E-5; carb 33.3 75 0.0026 31.3 6.9 52 122-176 44-102 (306)
358 2dpr_A CON-T(K7GLA); conantoxi 33.2 30 0.001 22.0 2.4 17 146-162 2-18 (26)
359 3h8v_A Ubiquitin-like modifier 33.2 1.3E+02 0.0044 30.2 8.6 67 304-380 91-168 (292)
360 3nco_A Endoglucanase fncel5A; 33.0 84 0.0029 31.1 7.2 52 121-176 42-104 (320)
361 3tfx_A Orotidine 5'-phosphate 33.0 2.7E+02 0.0092 27.5 10.7 131 283-436 77-237 (259)
362 3flu_A DHDPS, dihydrodipicolin 32.9 2.8E+02 0.0096 27.5 11.1 146 340-505 42-194 (297)
363 1rvk_A Isomerase/lactonizing e 32.9 86 0.0029 32.1 7.4 60 317-386 251-313 (382)
364 3glc_A Aldolase LSRF; TIM barr 32.8 57 0.002 33.0 5.9 66 281-353 194-264 (295)
365 1zud_1 Adenylyltransferase THI 32.7 1.5E+02 0.0052 28.6 8.9 66 304-380 84-149 (251)
366 2qkf_A 3-deoxy-D-manno-octulos 32.7 3.4E+02 0.012 26.9 11.6 89 302-414 73-162 (280)
367 4a29_A Engineered retro-aldol 32.7 63 0.0022 32.2 6.0 63 277-346 161-233 (258)
368 1tkk_A Similar to chloromucona 32.6 82 0.0028 32.1 7.2 45 126-174 148-192 (366)
369 3fst_A 5,10-methylenetetrahydr 32.5 66 0.0023 32.6 6.3 61 277-337 164-224 (304)
370 3nbm_A PTS system, lactose-spe 32.4 33 0.0011 29.6 3.5 63 303-380 22-84 (108)
371 1j0a_A 1-aminocyclopropane-1-c 32.3 1.7E+02 0.0059 29.1 9.5 124 364-506 85-217 (325)
372 3s1x_A Probable transaldolase; 32.2 59 0.002 31.7 5.7 58 283-346 119-188 (223)
373 2fli_A Ribulose-phosphate 3-ep 32.0 1.6E+02 0.0055 27.2 8.6 109 279-414 19-137 (220)
374 4adt_A Pyridoxine biosynthetic 32.0 99 0.0034 31.2 7.5 140 279-438 90-261 (297)
375 2zds_A Putative DNA-binding pr 32.0 1.9E+02 0.0065 28.2 9.6 148 277-430 15-227 (340)
376 1kbi_A Cytochrome B2, L-LCR; f 31.9 62 0.0021 35.2 6.4 66 279-348 354-434 (511)
377 2wkj_A N-acetylneuraminate lya 31.9 3.4E+02 0.012 27.0 11.5 95 334-439 39-137 (303)
378 1o66_A 3-methyl-2-oxobutanoate 31.7 1.1E+02 0.0037 30.8 7.7 178 340-538 38-244 (275)
379 1ve5_A Threonine deaminase; ri 31.7 2.4E+02 0.0083 27.7 10.4 118 365-507 79-206 (311)
380 3iau_A Threonine deaminase; py 31.6 4.2E+02 0.015 26.8 13.1 120 364-508 121-246 (366)
381 1jbq_A B, cystathionine beta-s 31.6 1.8E+02 0.0063 30.7 9.9 126 365-508 175-307 (435)
382 2egu_A Cysteine synthase; O-ac 31.5 2.4E+02 0.0083 27.7 10.4 122 365-508 79-207 (308)
383 1p0k_A Isopentenyl-diphosphate 31.2 80 0.0027 32.0 6.8 19 278-296 191-209 (349)
384 2v03_A Cysteine synthase B; py 31.1 3.6E+02 0.012 26.5 11.5 120 365-508 75-203 (303)
385 2jep_A Xyloglucanase; family 5 31.1 48 0.0016 33.9 5.1 57 121-177 70-133 (395)
386 3pm6_A Putative fructose-bisph 31.0 3.1E+02 0.011 27.8 11.0 149 272-424 8-200 (306)
387 1p4c_A L(+)-mandelate dehydrog 31.0 1.9E+02 0.0063 30.0 9.7 94 300-416 213-308 (380)
388 1ko7_A HPR kinase/phosphatase; 30.9 61 0.0021 33.1 5.7 84 317-422 49-157 (314)
389 3qze_A DHDPS, dihydrodipicolin 30.8 2.6E+02 0.0089 28.1 10.5 89 340-439 58-149 (314)
390 2whl_A Beta-mannanase, baman5; 30.8 57 0.0019 31.9 5.4 52 122-177 33-87 (294)
391 3r2g_A Inosine 5'-monophosphat 30.8 43 0.0015 35.0 4.7 46 114-159 93-138 (361)
392 2r8w_A AGR_C_1641P; APC7498, d 30.7 3.1E+02 0.011 27.7 11.2 95 334-439 62-160 (332)
393 1oy0_A Ketopantoate hydroxymet 30.7 3E+02 0.01 27.6 10.7 133 271-415 36-199 (281)
394 1pii_A N-(5'phosphoribosyl)ant 30.7 5.2E+02 0.018 27.5 14.2 112 277-416 68-185 (452)
395 1ceo_A Cellulase CELC; glycosy 30.7 73 0.0025 31.7 6.3 22 121-142 29-50 (343)
396 2htm_A Thiazole biosynthesis p 30.6 79 0.0027 31.7 6.3 84 340-438 146-230 (268)
397 3ldv_A Orotidine 5'-phosphate 30.6 58 0.002 32.2 5.4 75 283-365 169-253 (255)
398 1k77_A EC1530, hypothetical pr 30.6 2.8E+02 0.0096 25.7 10.2 37 280-317 19-55 (260)
399 3kw2_A Probable R-RNA methyltr 30.5 83 0.0028 31.0 6.5 71 221-294 33-108 (257)
400 3rcm_A TATD family hydrolase; 30.4 2.2E+02 0.0075 28.2 9.7 103 277-382 17-135 (287)
401 1tzz_A Hypothetical protein L1 30.3 88 0.003 32.3 7.0 45 126-174 173-217 (392)
402 3o07_A Pyridoxine biosynthesis 30.3 1.9E+02 0.0064 29.4 9.0 129 282-442 24-168 (291)
403 3pr9_A FKBP-type peptidyl-prol 30.1 85 0.0029 28.7 6.1 58 189-248 63-128 (157)
404 2oz8_A MLL7089 protein; struct 30.0 81 0.0028 32.6 6.7 62 109-174 132-197 (389)
405 2qdd_A Mandelate racemase/muco 29.9 93 0.0032 31.9 7.1 60 109-174 134-197 (378)
406 1y8q_A Ubiquitin-like 1 activa 29.9 1.7E+02 0.0057 29.9 9.0 66 303-380 91-156 (346)
407 1ydn_A Hydroxymethylglutaryl-C 29.9 1.8E+02 0.0061 28.7 9.0 29 109-141 72-100 (295)
408 1vhn_A Putative flavin oxidore 29.5 1.3E+02 0.0046 30.0 8.1 100 297-415 107-213 (318)
409 2ehh_A DHDPS, dihydrodipicolin 29.4 3.2E+02 0.011 27.0 10.8 95 334-439 28-126 (294)
410 3cny_A Inositol catabolism pro 29.3 1.2E+02 0.0039 29.1 7.3 98 280-379 35-159 (301)
411 1o94_A Tmadh, trimethylamine d 29.2 1.9E+02 0.0066 32.3 10.1 131 273-415 138-321 (729)
412 3ceu_A Thiamine phosphate pyro 29.2 1.3E+02 0.0044 28.2 7.4 72 276-350 95-176 (210)
413 3b0p_A TRNA-dihydrouridine syn 29.0 75 0.0026 32.6 6.1 64 280-350 148-229 (350)
414 1qo2_A Molecule: N-((5-phospho 29.0 1.6E+02 0.0055 27.8 8.2 130 277-427 83-235 (241)
415 1ka9_F Imidazole glycerol phos 28.9 2.1E+02 0.0071 27.0 9.0 66 280-350 35-108 (252)
416 3r8r_A Transaldolase; pentose 28.9 51 0.0017 31.9 4.5 57 283-345 117-185 (212)
417 1zzm_A Putative deoxyribonucle 28.7 2.3E+02 0.0079 26.6 9.3 100 280-382 23-135 (259)
418 3l0g_A Nicotinate-nucleotide p 28.6 58 0.002 33.2 5.1 69 278-354 216-294 (300)
419 1g01_A Endoglucanase; alpha/be 28.6 73 0.0025 32.4 6.0 52 122-177 55-113 (364)
420 2isw_A Putative fructose-1,6-b 28.5 3.6E+02 0.012 27.6 11.1 114 302-424 60-182 (323)
421 2yxg_A DHDPS, dihydrodipicolin 28.3 3.7E+02 0.013 26.4 11.0 95 334-439 28-126 (289)
422 3tqv_A Nicotinate-nucleotide p 28.3 64 0.0022 32.6 5.3 62 277-346 206-270 (287)
423 3ve9_A Orotidine-5'-phosphate 28.2 48 0.0016 31.9 4.2 81 279-366 118-200 (215)
424 3w01_A Heptaprenylglyceryl pho 27.9 4.3E+02 0.015 25.7 12.0 84 279-375 26-111 (235)
425 1ix5_A FKBP; ppiase, isomerase 27.7 40 0.0014 30.5 3.4 58 189-248 64-129 (151)
426 1h4p_A Glucan 1,3-beta-glucosi 27.7 78 0.0027 33.0 6.1 52 122-176 75-136 (408)
427 3stp_A Galactonate dehydratase 27.6 86 0.003 32.9 6.4 55 317-379 281-337 (412)
428 1kzl_A Riboflavin synthase; bi 27.6 1.2E+02 0.0042 29.1 7.0 54 210-265 25-85 (208)
429 1geq_A Tryptophan synthase alp 27.5 3.9E+02 0.013 25.1 13.6 100 317-438 80-190 (248)
430 1xky_A Dihydrodipicolinate syn 27.5 3.4E+02 0.012 26.9 10.7 95 334-439 40-138 (301)
431 1o60_A 2-dehydro-3-deoxyphosph 27.5 4.3E+02 0.015 26.4 11.3 89 302-414 76-165 (292)
432 1tv5_A Dhodehase, dihydroorota 27.4 76 0.0026 34.0 6.0 97 274-375 308-429 (443)
433 3n9k_A Glucan 1,3-beta-glucosi 27.4 63 0.0021 33.9 5.3 51 121-175 74-134 (399)
434 1ofd_A Ferredoxin-dependent gl 27.4 3.5E+02 0.012 33.5 12.2 118 285-415 993-1128(1520)
435 1z85_A Hypothetical protein TM 27.4 97 0.0033 30.2 6.3 71 220-294 40-115 (234)
436 1bqc_A Protein (beta-mannanase 27.2 81 0.0028 30.9 5.9 46 124-176 36-87 (302)
437 1i4n_A Indole-3-glycerol phosp 27.2 3.4E+02 0.012 26.5 10.3 128 281-432 115-247 (251)
438 2p10_A MLL9387 protein; putati 27.1 5E+02 0.017 26.2 12.8 72 334-415 177-259 (286)
439 3aof_A Endoglucanase; glycosyl 27.0 97 0.0033 30.3 6.4 51 122-176 35-96 (317)
440 2qul_A D-tagatose 3-epimerase; 27.0 2.8E+02 0.0096 26.1 9.6 121 280-405 21-175 (290)
441 3oru_A DUF1989 family protein; 27.0 91 0.0031 30.6 6.0 55 187-241 46-114 (234)
442 7a3h_A Endoglucanase; hydrolas 26.8 78 0.0027 31.3 5.7 53 120-176 43-102 (303)
443 3daq_A DHDPS, dihydrodipicolin 26.8 4.5E+02 0.015 25.9 11.4 96 334-440 30-129 (292)
444 1o58_A O-acetylserine sulfhydr 26.8 3.2E+02 0.011 26.8 10.3 119 365-508 79-208 (303)
445 2osx_A Endoglycoceramidase II; 26.7 1.3E+02 0.0045 31.7 7.8 53 120-176 65-127 (481)
446 3vup_A Beta-1,4-mannanase; TIM 26.7 78 0.0027 30.2 5.5 49 123-174 45-110 (351)
447 3cpr_A Dihydrodipicolinate syn 26.7 4.4E+02 0.015 26.2 11.3 95 334-439 44-142 (304)
448 4dwd_A Mandelate racemase/muco 26.7 1.7E+02 0.0058 30.4 8.5 64 108-175 124-199 (393)
449 3dz1_A Dihydrodipicolinate syn 26.5 3.3E+02 0.011 27.2 10.4 156 335-508 37-204 (313)
450 3n9r_A Fructose-bisphosphate a 26.5 3.7E+02 0.013 27.3 10.6 117 302-424 59-184 (307)
451 1nsj_A PRAI, phosphoribosyl an 26.4 1.6E+02 0.0055 27.9 7.6 69 277-346 10-83 (205)
452 1i8d_A Riboflavin synthase; ri 26.4 1.5E+02 0.0052 28.6 7.4 49 216-266 31-86 (213)
453 1ypf_A GMP reductase; GUAC, pu 26.3 58 0.002 33.1 4.7 43 116-158 101-145 (336)
454 3ble_A Citramalate synthase fr 26.2 5.2E+02 0.018 26.1 14.2 133 281-431 101-264 (337)
455 2nv1_A Pyridoxal biosynthesis 26.1 80 0.0027 31.5 5.6 37 400-436 223-259 (305)
456 2v9d_A YAGE; dihydrodipicolini 26.0 3E+02 0.01 28.0 10.1 95 334-439 59-157 (343)
457 2pn0_A Prokaryotic transcripti 25.9 1.1E+02 0.0037 27.4 5.9 64 176-242 54-128 (141)
458 1bxb_A Xylose isomerase; xylos 25.8 5.1E+02 0.017 26.2 11.9 145 280-431 37-234 (387)
459 1v5x_A PRA isomerase, phosphor 25.8 1.7E+02 0.0058 27.7 7.6 69 277-346 9-82 (203)
460 3l21_A DHDPS, dihydrodipicolin 25.7 3E+02 0.01 27.4 9.9 89 340-439 50-141 (304)
461 3gka_A N-ethylmaleimide reduct 25.7 5.6E+02 0.019 26.3 15.2 114 273-415 150-316 (361)
462 2xio_A Putative deoxyribonucle 25.7 1.5E+02 0.0053 29.0 7.6 103 277-381 27-147 (301)
463 1f6k_A N-acetylneuraminate lya 25.7 4E+02 0.014 26.2 10.7 97 332-439 29-130 (293)
464 3hgj_A Chromate reductase; TIM 25.7 1.7E+02 0.0058 29.8 8.1 64 282-351 245-323 (349)
465 2jpp_A Translational repressor 25.5 91 0.0031 25.1 4.6 29 221-250 6-34 (70)
466 1oy0_A Ketopantoate hydroxymet 25.5 1.1E+02 0.0037 30.9 6.3 71 472-543 189-268 (281)
467 3knb_A Titin; IG-like, titin, 25.4 1.9E+02 0.0064 23.1 6.9 71 185-256 12-89 (100)
468 2bti_A Carbon storage regulato 25.4 94 0.0032 24.5 4.6 30 220-250 7-36 (63)
469 2nx9_A Oxaloacetate decarboxyl 25.3 6.4E+02 0.022 26.9 14.6 152 273-438 26-200 (464)
470 1qap_A Quinolinic acid phospho 25.3 1.3E+02 0.0045 30.3 7.0 61 279-347 218-281 (296)
471 3tak_A DHDPS, dihydrodipicolin 25.3 4.6E+02 0.016 25.7 11.1 89 340-439 36-127 (291)
472 2ojp_A DHDPS, dihydrodipicolin 25.0 2.7E+02 0.0093 27.5 9.3 95 334-439 29-127 (292)
473 2v5j_A 2,4-dihydroxyhept-2-ENE 25.0 2.8E+02 0.0097 27.5 9.4 87 307-415 30-118 (287)
474 3qy7_A Tyrosine-protein phosph 25.0 4.5E+02 0.015 25.5 10.8 126 280-424 24-172 (262)
475 1ydy_A Glycerophosphoryl diest 25.0 2.6E+02 0.009 28.3 9.4 125 291-431 204-355 (356)
476 1vpz_A Carbon storage regulato 24.9 93 0.0032 25.2 4.6 32 217-249 14-45 (73)
477 3fok_A Uncharacterized protein 24.8 3.7E+02 0.013 27.3 10.2 139 400-541 133-295 (307)
478 3cwo_X Beta/alpha-barrel prote 24.8 3.8E+02 0.013 24.0 10.0 126 279-425 65-213 (237)
479 8abp_A L-arabinose-binding pro 24.6 2E+02 0.0067 27.3 8.0 67 304-381 21-89 (306)
480 1xi3_A Thiamine phosphate pyro 24.5 2.2E+02 0.0076 25.9 8.1 48 122-172 28-75 (215)
481 3pzt_A Endoglucanase; alpha/be 24.3 1E+02 0.0034 31.0 6.0 53 120-176 68-127 (327)
482 3no3_A Glycerophosphodiester p 24.2 1E+02 0.0035 29.5 5.8 103 291-433 132-235 (238)
483 3ijd_A Uncharacterized protein 24.2 1.1E+02 0.0038 31.3 6.2 101 276-379 165-279 (315)
484 3ajx_A 3-hexulose-6-phosphate 24.1 4E+02 0.014 24.1 11.3 121 288-436 24-156 (207)
485 3qc0_A Sugar isomerase; TIM ba 24.1 1.1E+02 0.0038 28.8 6.0 122 280-406 22-169 (275)
486 3paj_A Nicotinate-nucleotide p 23.9 78 0.0027 32.5 5.0 62 278-347 240-304 (320)
487 1vjz_A Endoglucanase; TM1752, 23.8 1.1E+02 0.0037 30.5 6.1 23 120-142 36-58 (341)
488 3f2b_A DNA-directed DNA polyme 23.7 3.5E+02 0.012 32.1 11.1 125 279-408 135-350 (1041)
489 3m9b_A Proteasome-associated A 23.6 2.3E+02 0.008 28.0 8.2 83 147-230 78-223 (251)
490 2rfg_A Dihydrodipicolinate syn 23.6 3.4E+02 0.012 26.9 9.7 95 334-439 28-126 (297)
491 1i4n_A Indole-3-glycerol phosp 23.6 5.2E+02 0.018 25.2 10.9 112 277-416 61-179 (251)
492 4a3u_A NCR, NADH\:flavin oxido 23.5 2.2E+02 0.0076 29.1 8.6 23 273-295 141-171 (358)
493 3ceu_A Thiamine phosphate pyro 23.4 2.1E+02 0.0072 26.6 7.7 98 279-416 16-115 (210)
494 3u3x_A Oxidoreductase; structu 23.2 1.3E+02 0.0046 30.4 6.8 86 329-437 76-164 (361)
495 3g0t_A Putative aminotransfera 23.2 1.1E+02 0.0036 31.1 6.0 42 120-161 381-435 (437)
496 3jy6_A Transcriptional regulat 23.2 3.7E+02 0.013 25.0 9.6 66 304-382 26-93 (276)
497 3fij_A LIN1909 protein; 11172J 23.2 1.7E+02 0.0057 28.3 7.2 46 333-379 55-113 (254)
498 1vyr_A Pentaerythritol tetrani 23.1 1.5E+02 0.0052 30.5 7.2 63 282-351 257-328 (364)
499 2og9_A Mandelate racemase/muco 23.1 1.2E+02 0.0041 31.4 6.4 62 109-174 148-214 (393)
500 2vef_A Dihydropteroate synthas 23.0 1.2E+02 0.0043 30.7 6.4 52 125-179 38-97 (314)
No 1
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=100.00 E-value=8.8e-137 Score=1122.39 Aligned_cols=486 Identities=37% Similarity=0.579 Sum_probs=458.5
Q ss_pred ccccccccccccccccccccccCCCCCCCCcEEEEecCCCCCCHHHHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHHH
Q 008112 80 RDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEY 159 (577)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~ 159 (577)
-+++|+|+|.|+. +++|..+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++|+++|++
T Consensus 42 ~~~~l~~~~~l~~--------~~~~~~~rkTKIV~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~a 113 (550)
T 3gr4_A 42 ADTFLEHMCRLDI--------DSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTA 113 (550)
T ss_dssp CSSHHHHHHTCCT--------TSCCCSCCCSEEEEECSTTTCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHH
T ss_pred cccHHHHhhccCC--------CCCCccCCCceEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4678999999987 67788899999999999999999999999999999999999999999999999999999
Q ss_pred HHh------cCCCeeEEEeecCCCeeEEeecCC----cEEEcCCCEEEEEEecC---CCCceEEeccccccccccCCCCE
Q 008112 160 NAQ------SKDNVIAIMLDTKGPEVRSGDLPQ----PITLTSGQEFTFTIQRG---VGSAECVSVNYDDFVNDVEVGDM 226 (577)
Q Consensus 160 ~~~------~~~~~i~I~~Dl~GpkiR~g~~~~----~i~L~~G~~v~lt~~~~---~~~~~~i~v~~~~~~~~v~~Gd~ 226 (577)
.++ ++ +||+||+||||||||+|.+.+ +++|++|+.|+|+.++. .++.+.|++||++|+++|++||+
T Consensus 114 ~~~~~~~~~~~-~~vaIllDlkGPkIR~G~~~~~~~~~v~L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~Gd~ 192 (550)
T 3gr4_A 114 TESFASDPILY-RPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSK 192 (550)
T ss_dssp HHTTTTCTTTC-CCCEEEEECCCSCCBBCCBTTBTTCCEEECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCE
T ss_pred HHhhccccccC-ceEEEEEeCCCCEEEEEecCCCCCCCeEEcCCCEEEEEeCCcccCCCCccEEecchHHHHhhcCCCCE
Confidence 998 77 999999999999999999963 79999999999998753 57888999999999999999999
Q ss_pred EEEeCCeEEEEEEEEeCCeEEEEEeeCcEeccCceeeeCCCCCCCCCCCccCHHHHHHHHhcCCCEEEEcCCCCHHHHHH
Q 008112 227 LLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHE 306 (577)
Q Consensus 227 I~idDG~i~l~V~~v~~~~v~~~v~~gG~l~s~Kginlp~~~~~lp~ltekD~~dI~~al~~gvD~I~~SfV~sa~dv~~ 306 (577)
||+|||+|.|+|++++++.+.|+|++||.|+++||||+||..+++|+|||||++||+|++++|+|||++|||++++|+.+
T Consensus 193 IlidDG~i~l~V~~v~~~~v~~~V~~gG~L~s~KgvNlPg~~l~lpalTekD~~dl~f~~~~~vD~ia~SfVr~a~Dv~~ 272 (550)
T 3gr4_A 193 IYVDDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHE 272 (550)
T ss_dssp EEETTTTEEEEEEEECSSEEEEEEEECEEECSSCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHH
T ss_pred EEEeCCEEEEEEEEEeCCEEEEEEEeCcEEcCCceeecCCCccCCCCCCHHHHHHHHHHHHcCCCEEEecCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHh
Q 008112 307 LKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLES 386 (577)
Q Consensus 307 lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeS 386 (577)
+|+++.+.|.++.|||||||++||+|+|+|++++|||||||||||+|+|+++|+.+||+|+++|+++|||||+|||||||
T Consensus 273 ~r~~L~~~g~~i~IIAKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~vp~~Qk~iI~~c~~agkpVi~ATQMLeS 352 (550)
T 3gr4_A 273 VRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLES 352 (550)
T ss_dssp HHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSTTGG
T ss_pred HHHHHHhcCCCceEEEEeCCHHHHHHHHHHHHhCCEEEEccchhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEehhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhccccCCCCCCCCCc--ccCCChhHHHH
Q 008112 387 MIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQ--AFKNHMSEMFA 464 (577)
Q Consensus 387 M~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~l~~--~~~~~~~~~ia 464 (577)
|+++|+|||||++||||||+||+||+|||+|||.|+||+|||++|++||+++|+..++...+..+.. ....+..+++|
T Consensus 353 Mi~~p~PTRAEvsDVanAvldG~DavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia 432 (550)
T 3gr4_A 353 MIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATA 432 (550)
T ss_dssp GGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHSCCCCCHHHHHH
T ss_pred hhcCCCccHHHHHHHHHHHHcCCcEEEEecCccCCCCHHHHHHHHHHHHHHHhhcchhHHHHHhhhhccCCCCChHHHHH
Confidence 9999999999999999999999999999999999999999999999999999988655332221111 12346889999
Q ss_pred HHHHHHHhhcCc-eEEEEcCChHHHHHHHhhCCCCeEEEEcCcHHHhhhhcccCCeeEEEeccC------CCHHHHHHHH
Q 008112 465 YHATMMSNTLGT-SIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFS------DDAEETFDNA 537 (577)
Q Consensus 465 ~~a~~~a~~~~a-aIiV~T~sG~tA~~is~~RP~~PIIAvT~~~~taR~L~L~~GV~Pvl~~~~------~d~d~~i~~a 537 (577)
.+|+++|+++++ +||+||+||+||+++|||||+|||||+|++++++|||+|+|||+|++++.. .+.+++++.|
T Consensus 433 ~aa~~~A~~l~a~aIv~~T~SG~TA~~iSr~RP~~PIia~T~~~~~aR~l~L~~GV~P~~~~~~~~~~~~~~~d~~~~~a 512 (550)
T 3gr4_A 433 VGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFA 512 (550)
T ss_dssp HHHHHHHHHTTCSCEEEECSSSHHHHHHHTTCCSSCEEEEESCHHHHHHGGGSTTEEEEECCSCCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEECCCcHHHHHHHhhCCCCCEEEEcCCHHHHHHHhccCCeEEEEecccccccccCCHHHHHHHH
Confidence 999999999999 999999999999999999999999999999999999999999999998653 4678899999
Q ss_pred HHHHHHcCCCCCCCEEEEEecCCCCCCCCCCcceEEEEEC
Q 008112 538 LGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVRKV 577 (577)
Q Consensus 538 l~~l~e~Gllk~GD~VVvv~G~~~p~~~~G~tn~irv~~V 577 (577)
+++++++|++++||.||+++|. |.+ +|.||++||..|
T Consensus 513 ~~~~~~~g~~~~GD~vVv~~G~--~~g-~G~TN~lrv~~v 549 (550)
T 3gr4_A 513 MNVGKARGFFKKGDVVIVLTGW--RPG-SGFTNTMRVVPV 549 (550)
T ss_dssp HHHHHHTTSCCTTCEEEEEEES--SSS-TTCEEEEEEEEC
T ss_pred HHHHHHcCCCCCcCEEEEEeCC--CCC-CCCCeEEEEEEc
Confidence 9999999999999999999996 655 899999999876
No 2
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.3e-135 Score=1107.13 Aligned_cols=472 Identities=34% Similarity=0.550 Sum_probs=436.8
Q ss_pred CCCCCCCcEEEEecCCCCCCHHHHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHHHHH-hcCCCeeEEEeecCCCeeEE
Q 008112 103 KPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNA-QSKDNVIAIMLDTKGPEVRS 181 (577)
Q Consensus 103 ~~~~~r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~-~~~~~~i~I~~Dl~GpkiR~ 181 (577)
++..+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++ +.+ +|++||+||||||||+
T Consensus 41 ~~~~~rkTKIV~TiGPas~s~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~~~-~~vaIllDl~GPkIR~ 119 (520)
T 3khd_A 41 VNLRSKKTHIVCTLGPACKSVETLVKLIDAGMDICRFNFSHGSHEDHKEMFNNVLKAQELRPN-CLLGMLLDTKGPEIRT 119 (520)
T ss_dssp CCGGGCSSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCSS-CCCEEEEECCCCCEEB
T ss_pred CcccCCCcEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhcC-CceEEEEeCCCCeEEe
Confidence 45678999999999999999999999999999999999999999999999999999998 777 9999999999999999
Q ss_pred eecCC-cEEEcCCCEEEEEEe-cCCCCceEEeccccccccccCCCCEEEEeCCeEEEEEEEEeCCeEEEEEeeCcEeccC
Q 008112 182 GDLPQ-PITLTSGQEFTFTIQ-RGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSR 259 (577)
Q Consensus 182 g~~~~-~i~L~~G~~v~lt~~-~~~~~~~~i~v~~~~~~~~v~~Gd~I~idDG~i~l~V~~v~~~~v~~~v~~gG~l~s~ 259 (577)
|.+.+ +++|++|+.|+|+.+ +..++.+.|++||++|+++|++||+||+|||+|.|+|++++++.+.|+|++||.|+++
T Consensus 120 G~~~~~~~~L~~G~~~~lt~~~~~~g~~~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~~~~~v~~~V~~gG~L~~~ 199 (520)
T 3khd_A 120 GFLKNKEVHLKEGSKLKLVTDYEFLGDETCIACSYKKLPQSVKPGNIILIADGSVSCKVLETHEDHVITEVLNSAVIGER 199 (520)
T ss_dssp CEEC-----------CEEESCTTCEECTTEEEBSCTTHHHHCCC-CEEEETTTTEEEEEEEECSSCEEEEECC-CCCCSS
T ss_pred eccCCCCeEecCCCEEEEecCCCcCCCccEEecccHHHHhhcCcCcEEEEeCCEEEEEEEEEECCEEEEEEEeCeEEeCC
Confidence 99974 579999999999988 4567888999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeCCCCCCCCCCCccCHHHH-HHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHH
Q 008112 260 RHLNVRGKSATLPSITEKDWDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT 338 (577)
Q Consensus 260 Kginlp~~~~~lp~ltekD~~dI-~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~ 338 (577)
||||+||..+++|+|||||++|| +|++++|+|||++|||++++||.++|+++.+.|.++.|||||||++||+|+|+|++
T Consensus 200 KgvNlPg~~~~lp~lTekD~~dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~g~~i~IIAKIE~~eav~nldeIl~ 279 (520)
T 3khd_A 200 KNMNLPNVKVDLPIISEKDKNDILNFAIPMGCNFIAASFIQSADDVRLIRNLLGPRGRHIKIIPKIENIEGIIHFDKILA 279 (520)
T ss_dssp CEEECTTSCCCSCSSCHHHHHHHHHTHHHHTCCEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHH
T ss_pred ceeecCCCcCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCcEEEEECCHHHHHhHHHHHH
Confidence 99999999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred hcCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEecccc
Q 008112 339 ASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGET 418 (577)
Q Consensus 339 ~sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ET 418 (577)
++|||||||||||+|+|+++||.+||+|+++|+++|||||+||||||||+++|+|||||++||||||+||+||+|||+||
T Consensus 280 ~sDGIMVARGDLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~ATQMLeSMi~~p~PTRAEvsDVanAVldGaDavMLSgET 359 (520)
T 3khd_A 280 ESDGIMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIITATQMLESMTKNPRPTRAEVTDVANAVLDGTDCVMLSGET 359 (520)
T ss_dssp HSSCEEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEECCCCCGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHH
T ss_pred hCCcEEEccccccccCCHHHHHHHHHHHHHHHHHcCCCeEEeehhhHHHhcCCCccHHHHHHHHHHHHhCCCEEEecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhccccCCCCCCCCC--cccCCChhHHHHHHHHHHHhhcCc-eEEEEcCChHHHHHHHhhC
Q 008112 419 AHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLG--QAFKNHMSEMFAYHATMMSNTLGT-SIVVFTRTGFMAILLSHYR 495 (577)
Q Consensus 419 a~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~l~--~~~~~~~~~~ia~~a~~~a~~~~a-aIiV~T~sG~tA~~is~~R 495 (577)
|.|+||+|||++|++||+++|+.+++...+..+. .....+..+++|.+|+++|+++++ +||+||+||+||+++||||
T Consensus 360 A~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~TA~~vSr~R 439 (520)
T 3khd_A 360 AGGKFPVEAVTIMSKICLEAEACIDYKLLYQSLVNAIETPISVQEAVARSAVETAESIQASLIIALTETGYTARLIAKYK 439 (520)
T ss_dssp HSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTC
T ss_pred cCCcCHHHHHHHHHHHHHHHHhhhhhhhhHhhhhhccCCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHhcC
Confidence 9999999999999999999998865432221110 012336889999999999999999 9999999999999999999
Q ss_pred CCCeEEEEcCcHHHhhhhcccCCeeEEEeccCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCCCCCCCCCcceEEEE
Q 008112 496 PSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVR 575 (577)
Q Consensus 496 P~~PIIAvT~~~~taR~L~L~~GV~Pvl~~~~~d~d~~i~~al~~l~e~Gllk~GD~VVvv~G~~~p~~~~G~tn~irv~ 575 (577)
|.|||||+|++++++|||+|+|||+|++++...+.+++++.+++++++.|++++||.||+++|. |.+.+|+||++||.
T Consensus 440 P~~PIia~T~~~~~~r~l~L~~GV~p~~~~~~~~~d~~~~~a~~~~~~~g~~~~GD~vVv~~G~--~~g~~G~TN~lrv~ 517 (520)
T 3khd_A 440 PSCTILALSASDSTVKCLNVHRGVTCIKVGSFQGTDIVIRNAIEIAKQRNMAKVGDSVIAIHGI--KEEVSGGTNLMKVV 517 (520)
T ss_dssp CSSEEEEEESCHHHHHHGGGSTTEEEEECCSCCCHHHHHHHHHHHHHHTTSSCTTCEEEEEEC---CCSSTTCEEEEEEE
T ss_pred CCCCEEEEcCCHHHHHHHhccCCeEEEEeCCCCCHHHHHHHHHHHHHHCCCCCCcCEEEEEeCc--cCCCCCCCeEEEEE
Confidence 9999999999999999999999999999988889999999999999999999999999999996 77789999999999
Q ss_pred EC
Q 008112 576 KV 577 (577)
Q Consensus 576 ~V 577 (577)
.|
T Consensus 518 ~v 519 (520)
T 3khd_A 518 QI 519 (520)
T ss_dssp EC
T ss_pred Ee
Confidence 86
No 3
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=100.00 E-value=9.4e-135 Score=1105.39 Aligned_cols=473 Identities=36% Similarity=0.566 Sum_probs=436.4
Q ss_pred CCCCCCCCcEEEEecCCCCCCHHHHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHHHHH-hcCCCeeEEEeecCCCeeE
Q 008112 102 TKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNA-QSKDNVIAIMLDTKGPEVR 180 (577)
Q Consensus 102 ~~~~~~r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~-~~~~~~i~I~~Dl~GpkiR 180 (577)
.+...+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++ +.+ +|++|++||+|||||
T Consensus 38 ~~~~~~RrTKIv~TlGPas~~~e~l~~Li~aGmnv~RlNfSHg~~e~h~~~i~~iR~~~~~~~~-~~vaIl~Dl~GPkIR 116 (526)
T 4drs_A 38 DNDVTQRKTQIICTIGPSCNNVESLIGLIDKGMSVARLNFSHGDHESHFKTLQNIREAAKARPH-STVGIMLDTKGPEIR 116 (526)
T ss_dssp ----CCCCSEEEEECCGGGCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTCTT-CCCEEEEECCCSCCB
T ss_pred cCCcccCCceEEEeeCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcCC-CceEEEEECCCCeeE
Confidence 344568999999999999999999999999999999999999999999999999999987 456 999999999999999
Q ss_pred EeecCC--cEEEcCCCEEEEEEec-CCCCceEEeccccccccccCCCCEEEEeCCeEEEEEEEEeCCeEEEEEeeCcEec
Q 008112 181 SGDLPQ--PITLTSGQEFTFTIQR-GVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELK 257 (577)
Q Consensus 181 ~g~~~~--~i~L~~G~~v~lt~~~-~~~~~~~i~v~~~~~~~~v~~Gd~I~idDG~i~l~V~~v~~~~v~~~v~~gG~l~ 257 (577)
||.+++ +++|++||.|+|+.+. ..++.+.|+++|++++++|++||.||+|||+|.|+|++++++.+.|+|++||.|+
T Consensus 117 ~g~~~~~~~i~L~~G~~v~lt~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~i~~~V~~gG~L~ 196 (526)
T 4drs_A 117 TGMLEGGKPIELKAGQTLKITTDYSMLGNSECISCSYSLLPKSVQIGSTVLIADGSLSTQVLEIGDDFIVCKVLNSVTIG 196 (526)
T ss_dssp BCCBSTTCCEECCTTSEEEEESCCSSCBCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEECSSEEEEECCSCCEEC
T ss_pred EEecCCCCeEEecCCCEEEEEeCCccCCCcceeeecchhhHHHhcCCCEEEEeCCCceEEEEEEeCCeEEEEeccCcccc
Confidence 999974 6999999999999874 4578889999999999999999999999999999999999999999999999999
Q ss_pred cCceeeeCCCCCCCCCCCccCHHH-HHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcC-------CCceEEEeecChhh
Q 008112 258 SRRHLNVRGKSATLPSITEKDWDD-IKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCG-------ADIHVIVKIESADS 329 (577)
Q Consensus 258 s~Kginlp~~~~~lp~ltekD~~d-I~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~-------~~i~IiaKIEt~~g 329 (577)
++||||+||..+++|.||+||.+| |+||+++|+|||++|||++++||.++|+++.+.| .+++||||||+++|
T Consensus 197 ~~KgvNlP~~~l~lp~lTekD~~D~l~fa~~~~vD~ialSFVr~~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE~~~a 276 (526)
T 4drs_A 197 ERKNMNLPGCKVHLPIIGDKDRHDIVDFALKYNLDFIALSFVQNGADVQLCRQIISENTQYSNGIPSSIKIISKIENLEG 276 (526)
T ss_dssp SSCBEECTTCCCCCCSSCHHHHHHHHHTTTTTTCSEEEETTCCSHHHHHHHHHHHHTCCTTTTTCCCCCEEEEEECSHHH
T ss_pred ccccccCCCcccCcccccchhHHHHHHHHHHhccCeeeecccCchhhHHHHHHHHHhhCcccccccccceeeeehhccHH
Confidence 999999999999999999999998 6899999999999999999999999999999876 36899999999999
Q ss_pred HhhHHHHHHhcCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhcc
Q 008112 330 IPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGA 409 (577)
Q Consensus 330 v~NldeIl~~sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~ 409 (577)
++|+|+|++++|||||||||||+|+|+|+||.+||+||++|+++|||||+||||||||+++|+|||||++||||||+||+
T Consensus 277 v~NldeIi~~sDgIMVARGDLgvEip~e~vp~~QK~II~~c~~~gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~DGa 356 (526)
T 4drs_A 277 VINFDSICSESDGIMVARGDLGMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVLDGS 356 (526)
T ss_dssp HHTHHHHHHHSSEEEEECTTHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhhccEEEEECCcccccCCHHHHHHHHHHHHHHHHHcCCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEeccccCCCCCHHHHHHHHHHHHHHHhccccCCCCCCCCC--cccCCChhHHHHHHHHHHHhhcCc-eEEEEcCChH
Q 008112 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLG--QAFKNHMSEMFAYHATMMSNTLGT-SIVVFTRTGF 486 (577)
Q Consensus 410 D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~l~--~~~~~~~~~~ia~~a~~~a~~~~a-aIiV~T~sG~ 486 (577)
||+|||+|||.|+||+|||++|++||+++|+.+++...+..+. .....+..+++|.+|+++|+++++ +||+||+||+
T Consensus 357 DavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~sG~ 436 (526)
T 4drs_A 357 DCVMLSGETANGAFPFDAVNVMSRVCAQAETCIDYPVLYHAIHSSVPKPVAVPEAIACSAVESAHDVNAKLIITITETGN 436 (526)
T ss_dssp SEEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHTTCSEEEEECSSSH
T ss_pred ceEEEcchhhcccCHHHHHHHHHHHHHHHhhcccchhhhhhhhhccCCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCcH
Confidence 9999999999999999999999999999999876543322111 112346899999999999999999 9999999999
Q ss_pred HHHHHHhhCCCCeEEEEcCcHHHhhhhcccCCeeEEEeccCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCCCCCCC
Q 008112 487 MAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRF 566 (577)
Q Consensus 487 tA~~is~~RP~~PIIAvT~~~~taR~L~L~~GV~Pvl~~~~~d~d~~i~~al~~l~e~Gllk~GD~VVvv~G~~~p~~~~ 566 (577)
||+++|||||.|||||+|++++++|+|+|+|||+|+++++..+.+++++.|+++++++|++++||.||+++|. |.+.+
T Consensus 437 tA~~iSr~RP~~pI~a~T~~~~~~r~l~L~wGV~p~~~~~~~~~d~~i~~a~~~~~~~g~~~~GD~vVi~~G~--p~g~~ 514 (526)
T 4drs_A 437 TARLISKYRPSQTIIACTAKPEVARGLKIARGVKTYVLNSIHHSEVVISNALALAKEESLIESGDFAIAVHGV--KESCP 514 (526)
T ss_dssp HHHHHHHTCCSSEEEEEESCHHHHHHGGGSTTEEEEECSCCCCHHHHHHHHHHHHHHTTSCCTTCEEEEEC---------
T ss_pred HHHHHHhhCCCCCEEEECCCHHHHHhhhccCCeEEEEeCCCCCHHHHHHHHHHHHHHCCCCCCcCEEEEEecc--CCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999996 77889
Q ss_pred CCcceEEEEEC
Q 008112 567 QSTHNIQVRKV 577 (577)
Q Consensus 567 G~tn~irv~~V 577 (577)
|+||++||++|
T Consensus 515 G~TN~lrv~~V 525 (526)
T 4drs_A 515 GSCNLMKIVRC 525 (526)
T ss_dssp ---CCEEEEEC
T ss_pred CcceEEEEEEC
Confidence 99999999987
No 4
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=100.00 E-value=1.7e-134 Score=1096.34 Aligned_cols=470 Identities=35% Similarity=0.559 Sum_probs=439.6
Q ss_pred CCCCCCCcEEEEecCCCCCCHHHHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHHHHHhcCCCeeEEEeecCCCeeEEe
Q 008112 103 KPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSG 182 (577)
Q Consensus 103 ~~~~~r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~GpkiR~g 182 (577)
++..+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++|+++|+++++++ +|++||+||||||||+|
T Consensus 15 ~~~~~rkTKIv~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~g-~~vaIl~Dl~GPkIR~g 93 (499)
T 3hqn_D 15 PVANYRAARIICTIGPSTQSVEALKGLIQSGMSVARMNFSHGSHEYHQTTINNVRQAAAELG-VNIAIALDTKGPEIRTG 93 (499)
T ss_dssp CCCSSCCSEEEEECSTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHT-CCCEEEEECCCCCCBBC
T ss_pred CcccCCCeEEEEEECCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhC-CcEEEEEeCCCCEEeee
Confidence 67789999999999999999999999999999999999999999999999999999999998 99999999999999999
Q ss_pred ecCC--cEEEcCCCEEEEEEec---CCCCceEEeccccccccccCCCCEEEEeCCeEEEEEEEEe-CCeEEEEEeeCcEe
Q 008112 183 DLPQ--PITLTSGQEFTFTIQR---GVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKT-EDSVKCEVVDGGEL 256 (577)
Q Consensus 183 ~~~~--~i~L~~G~~v~lt~~~---~~~~~~~i~v~~~~~~~~v~~Gd~I~idDG~i~l~V~~v~-~~~v~~~v~~gG~l 256 (577)
.+.+ ++ |++|++|+|+.+. ..++.+.+++||++|+++|++||.||+|||+|.|+|++++ ++.+.|+|++||.|
T Consensus 94 ~~~~~~~v-L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~i~~~v~~gG~L 172 (499)
T 3hqn_D 94 QFVGGDAV-MERGATCYVTTDPAFADKGTKDKFYIDYQNLSKVVRPGNYIYIDDGILILQVQSHEDEQTLECTVTNSHTI 172 (499)
T ss_dssp CBGGGEEE-ECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEEETTEEEEEECSCEEE
T ss_pred ccCCCCeE-EcCCCEEEEEecCcccCCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEcCCCeEEEEEEeCcEe
Confidence 9975 57 9999999999873 4678889999999999999999999999999999999998 67899999999999
Q ss_pred ccCceeeeCCCCCCCCCCCccCHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHH
Q 008112 257 KSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSI 336 (577)
Q Consensus 257 ~s~Kginlp~~~~~lp~ltekD~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeI 336 (577)
+++||||+||..+++|+|||||++||+|++++|+|||++|||++++|+.++|+++.+.|.++.|||||||++||+|+|+|
T Consensus 173 ~~~KgvNlPg~~~~lp~ltekD~~dl~~~~~~~vD~i~~sfVr~a~dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeI 252 (499)
T 3hqn_D 173 SDRRGVNLPGCDVDLPAVSAKDRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKALGPKGRDIMIICKIENHQGVQNIDSI 252 (499)
T ss_dssp ETTCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHCGGGTTSEEEEEECSHHHHHTHHHH
T ss_pred eCCCceecCCCCCCCCCCCHHHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888999999999999999999999
Q ss_pred HHhcCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEecc
Q 008112 337 ITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG 416 (577)
Q Consensus 337 l~~sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ 416 (577)
++++|||||||||||+|+|+++||.+||+|+++|+++|||||+||||||||+++|+|||||++||||||+||+||+|||+
T Consensus 253 l~~sDgImVaRGDLgvEi~~e~vp~~Qk~iI~~c~~agkpVi~ATQmLeSMi~~p~PTRAEvsDVanaV~dG~DavMLSg 332 (499)
T 3hqn_D 253 IEESDGIMVARGDLGVEIPAEKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLSG 332 (499)
T ss_dssp HHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTSSSCCHHHHHHHHHHHHHTCSEEEESH
T ss_pred HHhCCcEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEeehhHHHhccCCCccHHHHHHHHHHHHcCCcEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHhccccCCCCCCCCC--cccCCChhHHHHHHHHHHHhhcCc-eEEEEcCChHHHHHHHh
Q 008112 417 ETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLG--QAFKNHMSEMFAYHATMMSNTLGT-SIVVFTRTGFMAILLSH 493 (577)
Q Consensus 417 ETa~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~l~--~~~~~~~~~~ia~~a~~~a~~~~a-aIiV~T~sG~tA~~is~ 493 (577)
|||.|+||+|||++|++||+++|+.+++...+..+. .....+..+++|.+|+++|+++++ +||+||+||+||+++||
T Consensus 333 ETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~tA~~isr 412 (499)
T 3hqn_D 333 ETAKGKYPNEVVQYMARICLEAQSALNEYVFFNSIKKLQHIPMSADEAVCSSAVNSVYETKAKAMVVLSNTGRSARLVAK 412 (499)
T ss_dssp HHHTCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHhcchhHHHHhhhhhccCCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHh
Confidence 999999999999999999999998765432221110 011346889999999999999999 99999999999999999
Q ss_pred hCCCCeEEEEcCcHHHhhhhcccCCeeEEEeccC-----CCHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCCCCCCCCC
Q 008112 494 YRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFS-----DDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQS 568 (577)
Q Consensus 494 ~RP~~PIIAvT~~~~taR~L~L~~GV~Pvl~~~~-----~d~d~~i~~al~~l~e~Gllk~GD~VVvv~G~~~p~~~~G~ 568 (577)
|||.|||||+|++++++|||+|+|||+|++++.. .+.+++++.+++++++.|++++||.||+++|. | ..+|.
T Consensus 413 ~RP~~pIia~T~~~~~~r~l~L~~GV~p~~~~~~~~~~~~~~d~~~~~a~~~~~~~g~~~~GD~vVv~~G~--~-~~~G~ 489 (499)
T 3hqn_D 413 YRPNCPIVCVTTRLQTCRQLNITQGVESVFFDADKLGHDEGKEHRVAAGVEFAKSKGYVQTGDYCVVIHAD--H-KVKGY 489 (499)
T ss_dssp TCCSSCEEEEESCHHHHHHGGGSTTEEEEECCHHHHCCCTTCHHHHHHHHHHHHHTTSCCTTCEEEEEEEC--C------
T ss_pred hCCCCCEEEEcCCHHHHHHhhccCCeEEEEeccccccccCCHHHHHHHHHHHHHHcCCCCCcCEEEEEeCC--C-CCCCC
Confidence 9999999999999999999999999999998653 37899999999999999999999999999995 5 36899
Q ss_pred cceEEEEEC
Q 008112 569 THNIQVRKV 577 (577)
Q Consensus 569 tn~irv~~V 577 (577)
||++||+.|
T Consensus 490 TN~~rv~~v 498 (499)
T 3hqn_D 490 ANQTRILLV 498 (499)
T ss_dssp CEEEEEEEC
T ss_pred CeEEEEEEc
Confidence 999999976
No 5
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=100.00 E-value=7.8e-134 Score=1092.60 Aligned_cols=470 Identities=34% Similarity=0.542 Sum_probs=438.7
Q ss_pred CCCCCcEEEEecCCCCCCHHHHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHHHHHhc-CCCeeEEEeecCCCeeEEee
Q 008112 105 TVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQS-KDNVIAIMLDTKGPEVRSGD 183 (577)
Q Consensus 105 ~~~r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~-~~~~i~I~~Dl~GpkiR~g~ 183 (577)
..+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++++ + +|++|++||||||||+|.
T Consensus 33 ~~~rkTKIV~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~~-~~vaIl~Dl~GPkIR~g~ 111 (511)
T 3gg8_A 33 WTAHRTRIVCTMGPACWNVDTLVKMIDAGMNVCRLNFSHGDHETHARTVQNIQEAMKQRPE-ARLAILLDTKGPEIRTGF 111 (511)
T ss_dssp HTTCSSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCTT-CCCEEEEECCCCCCBBCC
T ss_pred cccCccEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCC-CceEEEEECCCCEEeccc
Confidence 35799999999999999999999999999999999999999999999999999999998 7 999999999999999999
Q ss_pred cCC--cEEEcCCCEEEEEEe-cCCCCceEEeccccccccccCCCCEEEEeCCeEEEEEEEEeCCeEEEEEeeCcEeccCc
Q 008112 184 LPQ--PITLTSGQEFTFTIQ-RGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRR 260 (577)
Q Consensus 184 ~~~--~i~L~~G~~v~lt~~-~~~~~~~~i~v~~~~~~~~v~~Gd~I~idDG~i~l~V~~v~~~~v~~~v~~gG~l~s~K 260 (577)
+.+ +++|++|++|+|+.+ ...++.+.|++||++|+++|++||.||+|||+|.|+|.+++++.+.|+|++||.|+++|
T Consensus 112 ~~~~~~v~L~~G~~~~lt~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~i~~~V~~gG~L~~~K 191 (511)
T 3gg8_A 112 LKDHKPITLQQGATLKIVTDYNLIGDETTIACSYGALPQSVKPGNTILIADGSLSVKVVEVGSDYVITQAQNTATIGERK 191 (511)
T ss_dssp -----CEEECTTCEEEEESCTTCCCCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEECSSEEEEEESSCEEECSSC
T ss_pred CCCCCCEEEccCCEEEEEECCCCCCCCCEEEcchHHHHhhcCCCCEEEEECCEEEEEEEEEeCCEEEEEEEeCeEEcCCc
Confidence 974 799999999999988 55688899999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCCCCCCCccCHHHH-HHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh
Q 008112 261 HLNVRGKSATLPSITEKDWDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA 339 (577)
Q Consensus 261 ginlp~~~~~lp~ltekD~~dI-~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~ 339 (577)
|||+||..+++|+|||||++|| +|++++|+|||++|||++++||.++|+++.+.|.++.|||||||++|++|+|+|+++
T Consensus 192 gvNlPg~~~~lp~lTekD~~Dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~~~iiaKIE~~eav~nldeIl~~ 271 (511)
T 3gg8_A 192 NMNLPNVKVQLPVIGEKDKHDILNFGIPMGCNFIAASFVQSADDVRYIRGLLGPRGRHIRIIPKIENVEGLVNFDEILAE 271 (511)
T ss_dssp BEECTTCCCCSCSSCHHHHHHHHHTTTTTTCCEEEETTCCSHHHHHHHHHHHTGGGTTCEEEEEECSHHHHHTHHHHHHH
T ss_pred ceecCCCccCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHh
Confidence 9999999999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccC
Q 008112 340 SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETA 419 (577)
Q Consensus 340 sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa 419 (577)
+|||||||||||+|+|+++||.+||+|+++|+++|||||+||||||||+++|+|||||++||||||+||+||+|||+|||
T Consensus 272 sDgimVaRGDLgvei~~e~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAEvsDVAnAV~dGaDavMLSgETA 351 (511)
T 3gg8_A 272 ADGIMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVANAVLDGTDCVMLSGETA 351 (511)
T ss_dssp CSCEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHH
T ss_pred CCeEEEecchhcCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHhCCCEEEeccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhccccCCCCCCCCC--cccCCChhHHHHHHHHHHHhhcCc-eEEEEcCChHHHHHHHhhCC
Q 008112 420 HGKFPLKAVKVMHTVSLRTEATITGGAMPPNLG--QAFKNHMSEMFAYHATMMSNTLGT-SIVVFTRTGFMAILLSHYRP 496 (577)
Q Consensus 420 ~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~l~--~~~~~~~~~~ia~~a~~~a~~~~a-aIiV~T~sG~tA~~is~~RP 496 (577)
.|+||+|||++|++||+++|+.+++...+..+. .....+..+++|.+|+++|+++++ +||+||.||+||+++|||||
T Consensus 352 ~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~tA~~iSr~RP 431 (511)
T 3gg8_A 352 NGEFPVITVETMARICYEAETCVDYPALYRAMCLAVPPPISTQEAVARAAVETAECVNAAIILALTETGQTARLIAKYRP 431 (511)
T ss_dssp TCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHTCC
T ss_pred CCCCHHHHHHHHHHHHHHHHhchhHHHHHhhhhhcccCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCchHHHHHHhhCC
Confidence 999999999999999999998765432221110 012346889999999999999999 99999999999999999999
Q ss_pred CCeEEEEcCcHHHhhhhcccCCeeEEEeccCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCCCCCCCCCcceEEEEE
Q 008112 497 SGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVRK 576 (577)
Q Consensus 497 ~~PIIAvT~~~~taR~L~L~~GV~Pvl~~~~~d~d~~i~~al~~l~e~Gllk~GD~VVvv~G~~~p~~~~G~tn~irv~~ 576 (577)
.|||||+|++++++|||+|+|||+|++++...+.+++++.|+++++++|++++||.||+++|. |.+.+|+||++||..
T Consensus 432 ~~PIia~T~~~~~~r~l~L~~GV~p~~~~~~~~~d~~~~~a~~~~~~~g~~~~GD~vVi~~G~--~~g~~G~TN~lrv~~ 509 (511)
T 3gg8_A 432 MQPILALSASESTIKHLQVIRGVTTMQVPSFQGTDHVIRNAIVVAKERELVTEGESIVAVHGM--KEEVAGSSNLLKVLT 509 (511)
T ss_dssp SSCEEEEESCHHHHHHGGGSTTEEEEECCC--CHHHHHHHHHHHHHHTTSCCTTCEEEEEEEC--------CCEEEEEEE
T ss_pred CCCEEEEcCCHHHHHHhhccCCeEEEEeCCCCCHHHHHHHHHHHHHHCCCCCCcCEEEEEeCc--cCCCCCCCeEEEEEE
Confidence 999999999999999999999999999988889999999999999999999999999999996 767889999999987
Q ss_pred C
Q 008112 577 V 577 (577)
Q Consensus 577 V 577 (577)
|
T Consensus 510 v 510 (511)
T 3gg8_A 510 V 510 (511)
T ss_dssp C
T ss_pred c
Confidence 6
No 6
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=100.00 E-value=9.7e-133 Score=1079.26 Aligned_cols=465 Identities=39% Similarity=0.628 Sum_probs=427.7
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHHHHHhcCCCeeEEEeecCCCeeEEeecC-
Q 008112 107 RRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLP- 185 (577)
Q Consensus 107 ~r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~GpkiR~g~~~- 185 (577)
+|||||||||||+|+++|+|++|+++||||||||||||++++|+++++++|+++++++ +|++|++||||||||+|.+.
T Consensus 1 ~r~tkIv~TiGPas~~~e~l~~li~aGm~v~RlNfsHg~~e~h~~~i~~iR~~~~~~~-~~v~il~Dl~GPkiR~g~~~~ 79 (470)
T 1e0t_A 1 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTG-KTAAILLDTKGPEIRTMKLEG 79 (470)
T ss_dssp CCCSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHT-CCCEEEEECCCCCEEBCCBGG
T ss_pred CCcceEEEECCCccCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcC-CceEEEEeCCCCEEEEEecCC
Confidence 5899999999999999999999999999999999999999999999999999999999 99999999999999999997
Q ss_pred -CcEEEcCCCEEEEEEe-cCCCCceEEeccccccccccCCCCEEEEeCCeEEEEEEEEeCCeEEEEEeeCcEeccCceee
Q 008112 186 -QPITLTSGQEFTFTIQ-RGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLN 263 (577)
Q Consensus 186 -~~i~L~~G~~v~lt~~-~~~~~~~~i~v~~~~~~~~v~~Gd~I~idDG~i~l~V~~v~~~~v~~~v~~gG~l~s~Kgin 263 (577)
++++|++|++|+|+.+ ...++++.+++||++|+++|++||.||+|||+|.|+|++++++.+.|+|++||.|+++||||
T Consensus 80 ~~~v~L~~G~~~~lt~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l~V~~~~~~~i~~~v~~gG~L~~~KgvN 159 (470)
T 1e0t_A 80 GNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVN 159 (470)
T ss_dssp GCCEEECTTCEEEEESCTTCCBBTTEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEETTEEEEEECSCEEECSSCEEE
T ss_pred CCceEEecCCEEEEEeCCccCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEeCCeEEEEEecCcEEeCCceee
Confidence 4799999999999987 34578889999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCCCCCccCHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhc-CCCceEEEeecChhhHhhHHHHHHhcCE
Q 008112 264 VRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSC-GADIHVIVKIESADSIPNLHSIITASDG 342 (577)
Q Consensus 264 lp~~~~~lp~ltekD~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~-~~~i~IiaKIEt~~gv~NldeIl~~sDG 342 (577)
+||..+++|+||++|.+||+|++++|+|+|++|||++++|++++++++.+. |.++.||+||||++|++|+|+|++++||
T Consensus 160 lPg~~~~lp~ltekD~~Di~~~l~~gvD~I~lsfV~saeDv~~~~~~l~~~~~~~i~IiakIEt~eav~nldeI~~~sDg 239 (470)
T 1e0t_A 160 LPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDG 239 (470)
T ss_dssp CSSCCCCCCSSCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHTTTCTTCEEEEEECSHHHHHTHHHHHHHSSE
T ss_pred cCCCcCCCCCCCcCCHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHHCCE
Confidence 999999999999999999999999999999999999999999999999998 8899999999999999999999999999
Q ss_pred EEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCC
Q 008112 343 AMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGK 422 (577)
Q Consensus 343 ImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~ 422 (577)
|||||||||+|+|.++|+.+||+|+.+|+++|||+|+||||||||++||+|||||++||+|||+||+||+|||+|||.|+
T Consensus 240 ImVargDLgveig~e~v~~~qk~ii~~araaGkpvI~ATQMLeSMi~~p~PTRAEvsDVanAV~dG~DavMLSgETA~G~ 319 (470)
T 1e0t_A 240 IMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLDSMIKNPRPTDAEAGDVANAILDGTDAVMLSGESAKGK 319 (470)
T ss_dssp EEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCEEEEECC---------CCCHHHHHHHHHHHHHTCSEEEECCC-----
T ss_pred EEECchHhhhhcCHHHHHHHHHHHHHHHHHcCCCEEEechhhHhhccCCCccHHHHhhhhHhhhcCccEEEecccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhccccCCCCCCCCCcccCCChhHHHHHHHHHHHhhcCc-eEEEEcCChHHHHHHHhhCCCCeEE
Q 008112 423 FPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGT-SIVVFTRTGFMAILLSHYRPSGTIF 501 (577)
Q Consensus 423 yP~eaV~~m~~I~~~aE~~~~~~~~~~~l~~~~~~~~~~~ia~~a~~~a~~~~a-aIiV~T~sG~tA~~is~~RP~~PII 501 (577)
||+|||++|++||+++|+++++...+..... ..+..+++|.+++++|+++++ +||+||+||+||+++|||||.||||
T Consensus 320 yPveaV~~m~~I~~~~E~~~~~~~~~~~~~~--~~~~~~aia~aa~~~a~~l~a~aIv~~T~sG~ta~~isr~RP~~pI~ 397 (470)
T 1e0t_A 320 YPLEAVSIMATICERTDRVMNSRLEFNNDNR--KLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATIL 397 (470)
T ss_dssp -CHHHHHHHHHHHHHHHTTCCCCCC-----------CHHHHHHHHHHHHHHTTCSBEEEECSSSHHHHHHHTTCCSSBEE
T ss_pred CHHHHHHHHHHHHHHHHhhhhhhHHHhhhcc--ccchHHHHHHHHHHHHHhcCCCEEEEECCChhHHHHHHhhCCCCCEE
Confidence 9999999999999999998665433332111 135689999999999999999 9999999999999999999999999
Q ss_pred EEcCcHHHhhhhcccCCeeEEEeccCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCCCCCCCCCcceEEEEEC
Q 008112 502 AFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVRKV 577 (577)
Q Consensus 502 AvT~~~~taR~L~L~~GV~Pvl~~~~~d~d~~i~~al~~l~e~Gllk~GD~VVvv~G~~~p~~~~G~tn~irv~~V 577 (577)
|+|++++++|||+|+|||+|+++++..+.+++++.++++++++|++++||.||+++|. | +.+|+||++||+.|
T Consensus 398 a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vvv~~g~--~-~~~g~tn~~~v~~v 470 (470)
T 1e0t_A 398 ALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGA--L-VPSGTTNTASVHVL 470 (470)
T ss_dssp EEESCHHHHHHGGGSTTEEEEECSCCCSHHHHHHHHHHHHHHTSSSCTTCEEEEEECS--S-SCTTCCCEEEEEEC
T ss_pred EECCCHHHHHHhhhhccceEEEecCCCCHHHHHHHHHHHHHHCCCCCCcCEEEEEeCC--C-CCCCccceEEEEEC
Confidence 9999999999999999999999998899999999999999999999999999999995 6 78899999999976
No 7
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=100.00 E-value=2.1e-133 Score=1109.81 Aligned_cols=472 Identities=39% Similarity=0.634 Sum_probs=447.5
Q ss_pred CCCCCCCcEEEEecCCCCCCHHHHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHHHHHhcCCCeeEEEeecCCCeeEEe
Q 008112 103 KPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSG 182 (577)
Q Consensus 103 ~~~~~r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~GpkiR~g 182 (577)
.|..+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++|+++|+++++++ +|++|++||||||||+|
T Consensus 18 ~~~~~r~TKIv~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~-~~vail~Dl~GPkiR~g 96 (606)
T 3t05_A 18 GSHMMRKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLD-KIVAILLDTKGPEIRTH 96 (606)
T ss_dssp ----CCCSEEEEECCGGGCSHHHHHHHHHTTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTT-CCCEEEEECCCCCCBBC
T ss_pred CcccccCceEEEEcCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhC-CCEEEEEeCCCCEEEee
Confidence 45568999999999999999999999999999999999999999999999999999999998 99999999999999999
Q ss_pred ecC-CcEEEcCCCEEEEEEecCCCCceEEeccccccccccCCCCEEEEeCCeEEEEE--EEEeCCeEEEEEeeCcEeccC
Q 008112 183 DLP-QPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLV--KSKTEDSVKCEVVDGGELKSR 259 (577)
Q Consensus 183 ~~~-~~i~L~~G~~v~lt~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~idDG~i~l~V--~~v~~~~v~~~v~~gG~l~s~ 259 (577)
.+. ++++|++||+|+|+.++..++.+.+++||++|+++|++||+||+|||+|.|+| ++++++.+.|+|++||.|+++
T Consensus 97 ~~~~~~i~L~~G~~~~lt~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~~v~~~V~~gG~L~~~ 176 (606)
T 3t05_A 97 NMKDGIIELERGNEVIVSMNEVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGELKNK 176 (606)
T ss_dssp CBTTSEEECCSSCEEEEESSCCCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEETTTTEEEEEECSCCEEETT
T ss_pred cCCCCCEEEcCCCEEEEEecCcCCCCCEEEeccHHHHHhcCCCCEEEEeCCeEEEEEEEEEecCCEEEEEEEECeEEeCC
Confidence 997 57999999999999987778889999999999999999999999999999999 778899999999999999999
Q ss_pred ceeeeCCCCCCCCCCCccCHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh
Q 008112 260 RHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA 339 (577)
Q Consensus 260 Kginlp~~~~~lp~ltekD~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~ 339 (577)
||||+||..+++|+|||||++||+|++++|+|||++||||+++|+.++|+++.+.|.++.|||||||++|++|+|||+++
T Consensus 177 KgvNlPg~~~~lp~ltekD~~dl~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~ 256 (606)
T 3t05_A 177 KGVNLPGVRVSLPGITEKDAEDIRFGIKENVDFIAASFVRRPSDVLEIREILEEQKANISVFPKIENQEGIDNIEEILEV 256 (606)
T ss_dssp CBEECSSSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHHHTTCCCEEEECCCSHHHHHTHHHHHHH
T ss_pred ceEECCCCccCCCCCChhHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHhHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccC
Q 008112 340 SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETA 419 (577)
Q Consensus 340 sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa 419 (577)
+|||||||||||+|+|+++||.+||+|+++|+++|||||+||||||||++||+|||||++||||||+||+||+|||+|||
T Consensus 257 sDGImVARGDLgvei~~e~vp~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAv~dGaDavMLSgETA 336 (606)
T 3t05_A 257 SDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETA 336 (606)
T ss_dssp CSCEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGTTCSSCCHHHHHHHHHHHHHTCSEEEECHHHH
T ss_pred CCEEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHcCCCEEEeccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhccccCCCCCCCCCcccCCChhHHHHHHHHHHHhhcCc-eEEEEcCChHHHHHHHhhCCCC
Q 008112 420 HGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGT-SIVVFTRTGFMAILLSHYRPSG 498 (577)
Q Consensus 420 ~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~l~~~~~~~~~~~ia~~a~~~a~~~~a-aIiV~T~sG~tA~~is~~RP~~ 498 (577)
.|+||+|||++|++||+++|+++++...+.........+..+++|.+++++|+++++ +||+||+||+||+++|||||.|
T Consensus 337 ~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~l~a~aIv~~T~sG~ta~~isr~RP~~ 416 (606)
T 3t05_A 337 AGLYPEEAVKTMRNIAVSAEAAQDYKKLLSDRTKLVETSLVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHS 416 (606)
T ss_dssp SCSCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHTCCSS
T ss_pred CCCCHHHHHHHHHHHHHHHHhhhhhHhhhhhhccccCCCHHHHHHHHHHHHHHhcCCCEEEEEcCCchHHHHHHhhCCCC
Confidence 999999999999999999998875533221111111346889999999999999999 9999999999999999999999
Q ss_pred eEEEEcCcHHHhhhhcccCCeeEEEeccCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCCCCCCCCCcceEEEEEC
Q 008112 499 TIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVRKV 577 (577)
Q Consensus 499 PIIAvT~~~~taR~L~L~~GV~Pvl~~~~~d~d~~i~~al~~l~e~Gllk~GD~VVvv~G~~~p~~~~G~tn~irv~~V 577 (577)
||||+|++++++|||+|+|||+|++++...+.+++++.++++++++|++++||.||+++|. |.+.+|+||++||+.|
T Consensus 417 pIia~t~~~~~~r~l~L~~GV~p~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vVi~~G~--p~g~~g~tN~~~v~~v 493 (606)
T 3t05_A 417 DIIAVTPSEETARQCSIVWGVQPVVKKGRKSTDALLNNAVATAVETGRVTNGDLIIITAGV--PTGETGTTNMMKIHLV 493 (606)
T ss_dssp EEEEEESCHHHHHHHHTSSSEEEEECCCCSSHHHHHHHHHHHHHHTTSCCTTCEEEEEECS--STTTCSSCCEEEEEEC
T ss_pred CEEEEcCCHHHHHhhhccCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEeCc--cCCCCCCccceEEEEe
Confidence 9999999999999999999999999988889999999999999999999999999999996 7778999999999876
No 8
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=100.00 E-value=7.1e-130 Score=1083.66 Aligned_cols=468 Identities=39% Similarity=0.644 Sum_probs=443.7
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHHHHHhcCCCeeEEEeecCCCeeEEeecCC
Q 008112 107 RRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQ 186 (577)
Q Consensus 107 ~r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~GpkiR~g~~~~ 186 (577)
+|||||||||||+|+++|+|++|+++||||||||||||++++|+++++++|+++++++ +|++|++||||||||+|.+.+
T Consensus 2 ~r~tkIv~TiGPas~~~~~l~~l~~aGm~v~RlNfsHg~~~~h~~~i~~ir~~~~~~~-~~v~il~Dl~GPkiR~g~~~~ 80 (587)
T 2e28_A 2 KRKTKIVSTIGPASESVDKLVQLMEAGMNVARLNFSHGDHEEHGRRIANIREAAKRTG-RTVAILLDTKGPEIRTHNMEN 80 (587)
T ss_dssp CCCSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTT-CCCEEEEECCCCCCBBCCCTT
T ss_pred CCCceEEEECCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhC-CceEEEEeCCCCEEEEeccCC
Confidence 6899999999999999999999999999999999999999999999999999999999 999999999999999999984
Q ss_pred -cEEEcCCCEEEEEEecCCCCceEEeccccccccccCCCCEEEEeCCeEEEEEEEE--eCCeEEEEEeeCcEeccCceee
Q 008112 187 -PITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSK--TEDSVKCEVVDGGELKSRRHLN 263 (577)
Q Consensus 187 -~i~L~~G~~v~lt~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~idDG~i~l~V~~v--~~~~v~~~v~~gG~l~s~Kgin 263 (577)
+++|++|++|+|+.++..++++.+++||++|+++|++||+||+|||+|.|+|+++ +++.+.|+|++||.|++|||||
T Consensus 81 ~~i~l~~G~~~~l~~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~~i~~~v~~gg~l~~~Kgvn 160 (587)
T 2e28_A 81 GAIELKEGSKLVISMSEVLGTPEKISVTYPSLIDDVSVGAKILLDDGLISLEVNAVDKQAGEIVTTVLNGGVLKNKKGVN 160 (587)
T ss_dssp SCBCCCSSCEEEEESSCCCCCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEEETTTTEEEEECCSCCCBCSSCBEE
T ss_pred CcEEEecCCEEEEEecCcCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEecCCCeEEEEEecCCEEcCCceee
Confidence 7999999999999886668889999999999999999999999999999999999 8999999999999999999999
Q ss_pred eCCCCCCCCCCCccCHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCC-CceEEEeecChhhHhhHHHHHHhcCE
Q 008112 264 VRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGA-DIHVIVKIESADSIPNLHSIITASDG 342 (577)
Q Consensus 264 lp~~~~~lp~ltekD~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~-~i~IiaKIEt~~gv~NldeIl~~sDG 342 (577)
+||..+++|+||+||.+||+|++++|+|||++|||++++|++++++++.+.|. ++.||+|||+++|++|+|||++++||
T Consensus 161 lPg~~~~lp~ltekD~~di~~~l~~g~d~v~~sfV~~a~dv~~~~~~l~~~~~~~~~iiakIE~~eav~nldeIl~~~Dg 240 (587)
T 2e28_A 161 VPGVKVNLPGITEKDRADILFGIRQGIDFIAASFVRRASDVLEIRELLEAHDALHIQIIAKIENEEGVANIDEILEAADG 240 (587)
T ss_dssp CTTSCCCCCSCCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHHTTCTTSEEEEEECSHHHHHTHHHHHHHSSE
T ss_pred cCCCcCCCCCCCcccHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHcCCCCceEEEEECCHHHHHhHHHHHHhCCE
Confidence 99999999999999999999999999999999999999999999999999885 89999999999999999999999999
Q ss_pred EEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCC
Q 008112 343 AMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGK 422 (577)
Q Consensus 343 ImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~ 422 (577)
|||||||||+|+|+++||.+||+|+++|+++|||||+||||||||++||+|||||++||||||+||+||+|||+|||.|+
T Consensus 241 ImVargDLgvei~~~~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAE~sDvanav~dG~DavMLSgETA~G~ 320 (587)
T 2e28_A 241 LMVARGDLGVEIPAEEVPLIQKLLIKKSNMLGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAVMLSGETAAGQ 320 (587)
T ss_dssp EEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCS
T ss_pred EEEcCchhhhhcCHHHHHHHHHHHHHHHHHcCCCeEEechhhHhhccCCCccHHHHhccchhhhhCcceeeecccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhccccCCCCCCCCCcccCCChhHHHHHHHHHHHhhcCc-eEEEEcCChHHHHHHHhhCCCCeEE
Q 008112 423 FPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGT-SIVVFTRTGFMAILLSHYRPSGTIF 501 (577)
Q Consensus 423 yP~eaV~~m~~I~~~aE~~~~~~~~~~~l~~~~~~~~~~~ia~~a~~~a~~~~a-aIiV~T~sG~tA~~is~~RP~~PII 501 (577)
||+|||++|++||+++|+++++...+.........+..+++|.+++++|+++++ +||+||+||+||+++|||||+||||
T Consensus 321 yPveaV~~m~~I~~~~E~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~~~a~aIv~~T~sG~ta~~isr~Rp~~pI~ 400 (587)
T 2e28_A 321 YPVEAVKTMHQIALRTEQALEHRDILSQRTKESQTTITDAIGQSVAHTALNLDVAAIVTPTVSGKTPQMVAKYRPKAPII 400 (587)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTCCSSCEE
T ss_pred CHHHHHHHHHHHHHHHhhhhhhhhHhhhhhcccccchHHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHhcCCCCCEE
Confidence 999999999999999999754311111100111135789999999999999999 9999999999999999999999999
Q ss_pred EEcCcHHHhhhhcccCCeeEEEeccCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCCCCCCCCCcceEEEEEC
Q 008112 502 AFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVRKV 577 (577)
Q Consensus 502 AvT~~~~taR~L~L~~GV~Pvl~~~~~d~d~~i~~al~~l~e~Gllk~GD~VVvv~G~~~p~~~~G~tn~irv~~V 577 (577)
|+|++++++|||+|+|||+|+++++..+.+++++.+++++++.|++++||.|++++|. |.+..|.||.+|+..+
T Consensus 401 a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~a~~~~~~~G~~k~GD~VVItqG~--P~g~~G~TN~LkI~~V 474 (587)
T 2e28_A 401 AVTSNEAVSRRLALVWGVYTKEAPHVNTTDEMLDVAVDAAVRSGLVKHGDLVVITAGV--PVGETGSTNLMKVHVI 474 (587)
T ss_dssp EEESSHHHHHHGGGSTTEEEEECCCCCSHHHHHHHHHHHHHHHTCCCTTCEEEEEECS--SCSSCCCCCEEEEEEC
T ss_pred EECCCHHHHHHHHHhcCceEEeccccCCHHHHHHHHHHHHHhCCcccccceEEEecCc--ccCcCCCCceEEEEEE
Confidence 9999999999999999999999998889999999999999999999999999999995 7677899999999764
No 9
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=100.00 E-value=3.3e-129 Score=1044.16 Aligned_cols=444 Identities=28% Similarity=0.487 Sum_probs=426.2
Q ss_pred CCCCcEEEEecCCCCCCHH--HHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHHHHHhcCCCeeEEEeecCCCeeEEee
Q 008112 106 VRRKTKIVCTIGPSTNTRE--MIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGD 183 (577)
Q Consensus 106 ~~r~tKIi~TiGPs~~~~e--~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~GpkiR~g~ 183 (577)
.+|||||||||||+|+++| +|++|+++ |||||||||||++|+|+++++++|+++++++ +|++|++||||||||+|.
T Consensus 13 ~~r~TKIv~TiGPas~~~e~~~l~~li~a-mnv~RlNfSHg~~e~h~~~i~~iR~~~~~~g-~~vaIl~Dl~GPkIR~g~ 90 (461)
T 3qtg_A 13 ARNLTKRVATLGPSTDVLRPDELIKFLDL-VDGVRINLAHASPNEVKFRIEAVRSYEKAKN-RPLAVIVDLKGPSIRVGS 90 (461)
T ss_dssp CSCSSEEEEECSHHHHTCCHHHHHHHHTT-CSEEEEETTTCCHHHHHHHHHHHHHHHHHHT-CCCEEEEECCCCCCBCCB
T ss_pred ccCCceEEEeeCCCccCchHHHHHHHHHh-CCEEEEECCCCCHHHHHHHHHHHHHHHHHcC-CceEEEEeCCCCEEEECC
Confidence 5799999999999999999 99999999 9999999999999999999999999999998 999999999999999999
Q ss_pred cCCcEEEcCCCEEEEEEecCCCCceEEeccccccccccCCCCEEEEeCCeEEEEEEEEeCCeEEEEEeeCcEeccCceee
Q 008112 184 LPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLN 263 (577)
Q Consensus 184 ~~~~i~L~~G~~v~lt~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~idDG~i~l~V~~v~~~~v~~~v~~gG~l~s~Kgin 263 (577)
+. +++|++|++|+|+.++..++ +.++++|++|+++|++||.||+|||+|.|+|++++++.+.|+|++||.|+++||||
T Consensus 91 ~~-~v~L~~G~~~~lt~~~~~~~-~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~~~~~v~~~V~~gG~L~~~KgvN 168 (461)
T 3qtg_A 91 TS-PINVQEGEVVKFKLSDKSDG-TYIPVPNKAFFSAVEQNDVILMLDGRLRLKVTNTGSDWIEAVAESSGVITGGKAIV 168 (461)
T ss_dssp CS-CEEECTTCEEEEEECSBCCS-SSEEECCHHHHHHCCTTCEEEEGGGTEEEEEEEECSSEEEEEESSCEEECTTCBEE
T ss_pred CC-CEEEeCCCEEEEEecCCCCC-cEEEcchHHHHhhcCCCCEEEEeCCEEEEEEEEEECCEEEEEEEECCEecCCCcee
Confidence 95 69999999999999876666 88999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCCCCCccCHHHHH--HHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcC
Q 008112 264 VRGKSATLPSITEKDWDDIK--FGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASD 341 (577)
Q Consensus 264 lp~~~~~lp~ltekD~~dI~--~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sD 341 (577)
+||+.+++|.|||||++||+ |++++|+|||++|||++++|+.++|+++.+.|.++.|||||||++|++|+|+|++++|
T Consensus 169 lPg~~~~lp~lTekD~~dl~~~~~~~~~vD~Ia~SfVr~a~Dv~~~r~~l~~~g~~~~iiaKIE~~eav~nldeIl~~sD 248 (461)
T 3qtg_A 169 VEGKDYDISTPAEEDVEALKAISPIRDNIDYVAISLAKSCKDVDSVRSLLTELGFQSQVAVKIETKGAVNNLEELVQCSD 248 (461)
T ss_dssp ETTCCCCCCSSCHHHHHHHHHHGGGGGGCCEEEECSCCSHHHHHHHHHHHHHTTCCCEEEEEECSHHHHHTHHHHHHTCS
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHhcc
Confidence 99999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCC
Q 008112 342 GAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHG 421 (577)
Q Consensus 342 GImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G 421 (577)
||||||||||+|+|+++|+.+||+|+++|+++|||||+||||||||+++|+|||||++||||||+||+||+|||+|||.|
T Consensus 249 gImVaRGDLgvei~~e~v~~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAV~dGaDavMLSgETA~G 328 (461)
T 3qtg_A 249 YVVVARGDLGLHYGLDALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPTRAEINDVFTTASMGVDSLWLTNETASG 328 (461)
T ss_dssp EEEEEHHHHTTTSCTTTHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHTTCSEEEECHHHHTS
T ss_pred cEEEccccccccCCHHHHHHHHHHHHHHHHHhCCCEEEeccchHhhccCCCccHHHHHHHHHHHHhCCcEEEEcccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhccccCCCCCCCCCcccCCChhHHHHHHHHHHHhhcCceEEEEcCChHHHHHHHhhCCCCeEE
Q 008112 422 KFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTIF 501 (577)
Q Consensus 422 ~yP~eaV~~m~~I~~~aE~~~~~~~~~~~l~~~~~~~~~~~ia~~a~~~a~~~~aaIiV~T~sG~tA~~is~~RP~~PII 501 (577)
+||+|||++|++||+++|+++.+. ....+..+++|.+++++|+++++.||+||+||+||+++|||||.||||
T Consensus 329 ~yPveaV~~m~~I~~~aE~~~~~~--------~~~~~~~~aia~aa~~~a~~~~a~Iv~~T~SG~tA~~vsr~RP~~pIi 400 (461)
T 3qtg_A 329 KYPLAAVSWLSRILMNVEYQIPQS--------PLLQNSRDRFAKGLVELAQDLGANILVFSMSGTLARRIAKFRPRGVVY 400 (461)
T ss_dssp SCHHHHHHHHHHHHHTCCCCCCCC--------CCCCSHHHHHHHHHHHHHHHHTCEEEEECSSSHHHHHHHTTCCSSCEE
T ss_pred CCHHHHHHHHHHHHHHHHhhhhhc--------cCCCCHHHHHHHHHHHHHHhcCCCEEEECCCcHHHHHHHhhCCCCCEE
Confidence 999999999999999999886542 123468899999999999999988888999999999999999999999
Q ss_pred EEcCcHHHhhhhcccCCeeEEEeccCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCCCCCCCCCcceEEEE
Q 008112 502 AFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVR 575 (577)
Q Consensus 502 AvT~~~~taR~L~L~~GV~Pvl~~~~~d~d~~i~~al~~l~e~Gllk~GD~VVvv~G~~~p~~~~G~tn~irv~ 575 (577)
|+|++++++|||+|+|||+|++++ ..+.|++++.++++++++| ||+++|. +|+||++||+
T Consensus 401 a~T~~~~~~r~l~l~~GV~p~~~~-~~~~d~~~~~a~~~~~~~g-------vvit~g~------p~~TN~~~v~ 460 (461)
T 3qtg_A 401 VGTPNVRVARSLSIVWALEPLYIP-AENYEEGLEKLISLKGTTP-------FVATYGI------RGGVHSVKVK 460 (461)
T ss_dssp EEESCHHHHHHHTTSTTEEEEECC-CSSHHHHHHHHHHHHCCSS-------EEEEECC------TTSCCEEEEE
T ss_pred EeCCCHHHHhhceeccceEEEEeC-CCCHHHHHHHHHHHHHHCC-------EEEEecc------CCCCeEEEEE
Confidence 999999999999999999999998 7889999999999998877 7777774 4799999996
No 10
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=100.00 E-value=3.4e-128 Score=1051.41 Aligned_cols=484 Identities=33% Similarity=0.529 Sum_probs=447.6
Q ss_pred ccccccccccccccccccccCCCCCCCCcEEEEecCCCCCCHHHHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHHHHH
Q 008112 82 GEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNA 161 (577)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~ 161 (577)
++++|++.++. .+. ..+|||||||||||+|+++|+|++|+++||||||||||||++++|+++++++|++++
T Consensus 2 ~~~~~~~~~~~--------~~~-~~~r~tkIv~TlGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~ir~~~~ 72 (500)
T 1a3w_A 2 SRLERLTSLNV--------VAG-SDLRRTSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEE 72 (500)
T ss_dssp CHHHHHHCC--------------CCCCCSBCCEECCGGGCSHHHHHHHHHHTCCSEECBTTSCCHHHHHHHHHHHHHHHH
T ss_pred chhhhhhhcCc--------ccc-ccCCCcEEEEEcCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 35778877754 221 457999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCeeEEEeecCCCeeEEeecCC--cEEEcCCCEEEEEEec---CCCCceEEeccccccccccCCCCEEEEeCCeEEE
Q 008112 162 QSKDNVIAIMLDTKGPEVRSGDLPQ--PITLTSGQEFTFTIQR---GVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSL 236 (577)
Q Consensus 162 ~~~~~~i~I~~Dl~GpkiR~g~~~~--~i~L~~G~~v~lt~~~---~~~~~~~i~v~~~~~~~~v~~Gd~I~idDG~i~l 236 (577)
+++++|++|++||||||||+|.+.+ +++|++|++|+|+.+. ..++++.+++||++|+++|++||.||+|||+|.|
T Consensus 73 ~~~~~~v~il~Dl~GPkiR~g~~~~~~~v~l~~G~~~~lt~~~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l 152 (500)
T 1a3w_A 73 LYPGRPLAIALDTKGPEIRTGTTTNDVDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVISAGRIIYVDDGVLSF 152 (500)
T ss_dssp HCCSSCCCCEEECCCSCCBBCCCSSSSCCCCCSSCEEEEECSSTTTTTCCSSCEEBSCTTHHHHCCTTCEEEETTTTEEE
T ss_pred HcCCcceEEEEeCCCCEEEEeecCCCCceEeecCCEEEEEeCCcccCCCCCcEEEechHHHHhhcCCCCEEEEeCCEEEE
Confidence 9876899999999999999999974 6999999999999875 3578889999999999999999999999999999
Q ss_pred EEEEE-eCCeEEEEEeeCcEeccCceeeeCCCCCCCCCCCccCHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcC
Q 008112 237 LVKSK-TEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCG 315 (577)
Q Consensus 237 ~V~~v-~~~~v~~~v~~gG~l~s~Kginlp~~~~~lp~ltekD~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~ 315 (577)
+|+++ +++.+.|+|++||.|++|||||+||..+++|.||++|.+||+|+++.|+|+|++|||++++|++++++++.+.|
T Consensus 153 ~V~~~~~~~~v~~~v~~gG~L~~~KgvNlPg~~~~lp~lt~~D~~DI~~~l~~g~d~I~lpfV~saeDv~~~~~~l~~~~ 232 (500)
T 1a3w_A 153 QVLEVVDDKTLKVKALNAGKICSHKGVNLPGTDVDLPALSEKDKEDLRFGVKNGVHMVFASFIRTANDVLTIREVLGEQG 232 (500)
T ss_dssp ECCBCCC--CEEEEBCSCCCCCSSCBEECTTCCCCCCSSCHHHHHHHHHHHHHTCSEEEECSCCSHHHHHHHHHHHHHHH
T ss_pred EEEEEccCCeEEEEEecCCEEeCCCCCcCCCCccCCCCCChhHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcC
Confidence 99999 89999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CCceEEEeecChhhHhhHHHHHHhcCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCCh
Q 008112 316 ADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTR 395 (577)
Q Consensus 316 ~~i~IiaKIEt~~gv~NldeIl~~sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~Ptr 395 (577)
.++.||+||||++|++|+|+|++++|||||||||||+|+|.++++.+|++|+.+|+++|||+|+||||||||+.+|.|||
T Consensus 233 ~~i~IiakIEt~eav~nldeI~~~~DgImvgrgDLgvelg~~~v~~aqk~ii~aaraaGkpvi~ATQMLeSMi~~~~ptr 312 (500)
T 1a3w_A 233 KDVKIIVKIENQQGVNNFDEILKVTDGVMVARGDLGIEIPAPEVLAVQKKLIAKSNLAGKPVICATQMLESMTYNPRPTR 312 (500)
T ss_dssp TTSEEEEEECSSHHHHSHHHHHHHSSEEEECHHHHHHHTTGGGHHHHHHHHHHHHHHHTCCEEECSSTTGGGGSCSSCCH
T ss_pred CCcEEEEEECChHHHHhHHHHHHhCCEEEECchHhhhhcCcHHHHHHHHHHHHHHHhcCCCEEEEeehhhhhccCCCchH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhccccCCCCCCCCCc--ccCCChhHHHHHHHHHHHhh
Q 008112 396 AEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQ--AFKNHMSEMFAYHATMMSNT 473 (577)
Q Consensus 396 AEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~l~~--~~~~~~~~~ia~~a~~~a~~ 473 (577)
||++|++|++.+|+|++|||+||+.|+||+|||++|++||+++|+.+++...+..+.. ....+..+++|.+|+++|++
T Consensus 313 aEvsdva~av~~G~d~vmLs~eta~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~ 392 (500)
T 1a3w_A 313 AEVSDVGNAILDGADCVMLSGETAKGNYPINAVTTMAETAVIAEQAIAYLPNYDDMRNCTPKPTSTTETVAASAVAAVFE 392 (500)
T ss_dssp HHHHHHHHHHHHTCSEECBSTTTTTCSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTSCCSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEecchhhcchhHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhccccccchHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999997543221111111 11235789999999999999
Q ss_pred cCc-eEEEEcCChHHHHHHHhhCCCCeEEEEcCcHHHhhhhcccCCeeEEEecc------CCCHHHHHHHHHHHHHHcCC
Q 008112 474 LGT-SIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEF------SDDAEETFDNALGLLQKQGM 546 (577)
Q Consensus 474 ~~a-aIiV~T~sG~tA~~is~~RP~~PIIAvT~~~~taR~L~L~~GV~Pvl~~~------~~d~d~~i~~al~~l~e~Gl 546 (577)
+++ +||+||+||+||+++|||||.|||||+|++++++|||+|+|||+|++++. ..+.+++++.++++++++|+
T Consensus 393 ~~a~aIv~~T~sG~ta~~isr~RP~~pI~a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~ 472 (500)
T 1a3w_A 393 QKAKAIIVLSTSGTTPRLVSKYRPNCPIILVTRCPRAARFSHLYRGVFPFVFEKEPVSDWTDDVEARINFGIEKAKEFGI 472 (500)
T ss_dssp HTCSCEEEECSSSHHHHHHHHTCCSSCEEEEESCTTHHHHGGGSTTEEEEECCSCCCSCTTTHHHHHHHHHHHHHHHTTC
T ss_pred cCCCEEEEECCCchHHHHHHhhCCCCCEEEEcCCHHHHHhhhhhCCeEEEEecccccccccCCHHHHHHHHHHHHHHCCC
Confidence 999 99999999999999999999999999999999999999999999999875 67789999999999999999
Q ss_pred CCCCCEEEEEecCCCCCCCCCCcceEEEEEC
Q 008112 547 VKEGEEVALLQSGRQPIWRFQSTHNIQVRKV 577 (577)
Q Consensus 547 lk~GD~VVvv~G~~~p~~~~G~tn~irv~~V 577 (577)
+++||.||+++|. |.+ +|+||++||+.|
T Consensus 473 ~~~GD~vvv~~g~--~~~-~g~tn~~~v~~v 500 (500)
T 1a3w_A 473 LKKGDTYVSIQGF--KAG-AGHSNTLQVSTV 500 (500)
T ss_dssp SCTTCEEEEEECC--CTT-TCCCCEEEEEEC
T ss_pred CCCcCEEEEEecc--cCC-CCCCceEEEEEC
Confidence 9999999999995 656 899999999976
No 11
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=99.74 E-value=1.6e-18 Score=181.66 Aligned_cols=149 Identities=12% Similarity=0.107 Sum_probs=128.9
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhc--------------------------------CCCceEEEeecC
Q 008112 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSC--------------------------------GADIHVIVKIES 326 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~--------------------------------~~~i~IiaKIEt 326 (577)
..||+++++.|+++|++|||++++|++++++++... +.++.|+++|||
T Consensus 107 ~~di~~~LdaGa~gImlP~V~saee~~~~~~~~~~~p~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~~~i~vi~mIEt 186 (339)
T 1izc_A 107 EVSLSTALDAGAAGIVIPHVETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQIES 186 (339)
T ss_dssp HHHHHHHHHHTCSEEEETTCCCHHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHHHHCEEEEEECS
T ss_pred HHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCcccccchhhcccccccccccchhhhhhhcCcCceEEEEECh
Confidence 379999999999999999999999999999988531 124789999999
Q ss_pred hhhHhhHHHHHHh--cCEEEEcCCCccCC--------CCC---CcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCC
Q 008112 327 ADSIPNLHSIITA--SDGAMVARGDLGAE--------LPI---EEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTP 393 (577)
Q Consensus 327 ~~gv~NldeIl~~--sDGImIaRGDLg~e--------lg~---e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~P 393 (577)
++|++|+++|+++ +|++|||++||+.+ +|. +.+..++++++.+|+++|||++..+. .|
T Consensus 187 ~~av~nldeIaa~~~vD~l~iG~~DLs~~~~~~~~~~lG~~~~p~v~~a~~~iv~aaraaGk~~g~~~~---------d~ 257 (339)
T 1izc_A 187 VKGVENVDAIAAMPEIHGLMFGPGDYMIDAGLDLNGALSGVPHPTFVEAMTKFSTAAQRNGVPIFGGAL---------SV 257 (339)
T ss_dssp HHHHHTHHHHHTCTTCCCEEECHHHHHHHTTCCTTCCTTSCCCHHHHHHHHHHHHHHHHTTCCEEEECS---------SG
T ss_pred HHHHHHHHHHhcCCCCCEEEECHHHHHhhhhcccchhhCCCCCHHHHHHHHHHHHHHHHhCCceeEecC---------CH
Confidence 9999999999975 99999999999999 886 57899999999999999999976441 22
Q ss_pred ChHhHHHHHHHHHhccceEEeccccCC--CCCHHHHHHHHHHHHHHHhccc
Q 008112 394 TRAEVSDIAIAVREGADAVMLSGETAH--GKFPLKAVKVMHTVSLRTEATI 442 (577)
Q Consensus 394 trAEv~Dv~nav~~G~D~imLs~ETa~--G~yP~eaV~~m~~I~~~aE~~~ 442 (577)
.++.+++.+|+|+++++.++.. ..| .+.|+++++|+.++|...
T Consensus 258 -----~~a~~~~~~Gf~~l~~~~di~~l~~~~-~~~v~~a~~iv~a~e~~~ 302 (339)
T 1izc_A 258 -----DMVPSLIEQGYRAIAVQFDVWGLSRLV-HGSLAQARASAKQFAGQG 302 (339)
T ss_dssp -----GGHHHHHHTTEEEEEEEEHHHHHHHHH-HHHHHHHHHHHGGGCC--
T ss_pred -----HHHHHHHHhCCCEEEecHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 5678999999999999998876 666 789999999999998764
No 12
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=99.66 E-value=1.3e-16 Score=163.60 Aligned_cols=129 Identities=25% Similarity=0.259 Sum_probs=108.3
Q ss_pred ccCHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHH---------------------------hcCCCceEEEeecChh
Q 008112 276 EKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLK---------------------------SCGADIHVIVKIESAD 328 (577)
Q Consensus 276 ekD~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~---------------------------~~~~~i~IiaKIEt~~ 328 (577)
+.|..||+++++.|+++|++|||++++|++++++.+. ..+.++.++++|||++
T Consensus 98 ~~d~~di~~~ld~ga~~ImlP~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~ 177 (287)
T 2v5j_A 98 WNDPVQIKQLLDVGTQTLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETRE 177 (287)
T ss_dssp SSCHHHHHHHHHTTCCEEEESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHH
T ss_pred CCCHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHH
Confidence 4566799999999999999999999999999988653 1223488999999999
Q ss_pred hHhhHHHHHHh--cCEEEEcCCCccCCCCC------CcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHH
Q 008112 329 SIPNLHSIITA--SDGAMVARGDLGAELPI------EEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSD 400 (577)
Q Consensus 329 gv~NldeIl~~--sDGImIaRGDLg~elg~------e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~D 400 (577)
|++|+++|+++ +|+++||++||+.++|. +.+..++++++.+|+++|||+++.+ ..| ..
T Consensus 178 av~n~deIaa~~~vD~l~iG~~DLs~~lg~~~~~~~p~v~~a~~~iv~aaraaG~~~gv~~---------~d~-----~~ 243 (287)
T 2v5j_A 178 AMKNLPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILI---------ANE-----QL 243 (287)
T ss_dssp HHHTHHHHHTSTTEEEEEECHHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHHTTSEEEEEC---------CCH-----HH
T ss_pred HHHHHHHHhCcCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHcCCeeEEec---------CCH-----HH
Confidence 99999999985 99999999999999986 3588999999999999999998632 122 24
Q ss_pred HHHHHHhccceEEecccc
Q 008112 401 IAIAVREGADAVMLSGET 418 (577)
Q Consensus 401 v~nav~~G~D~imLs~ET 418 (577)
...++.+|++.+.++.++
T Consensus 244 a~~~~~~G~~~~s~~~d~ 261 (287)
T 2v5j_A 244 AKRYLELGALFVAVGVDT 261 (287)
T ss_dssp HHHHHHTTCSEEEEEEHH
T ss_pred HHHHHHhCCCEEEECcHH
Confidence 556788999999988664
No 13
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=99.66 E-value=1.5e-16 Score=161.51 Aligned_cols=127 Identities=24% Similarity=0.297 Sum_probs=107.7
Q ss_pred CHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHh---------------------------cCCCceEEEeecChhhH
Q 008112 278 DWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKS---------------------------CGADIHVIVKIESADSI 330 (577)
Q Consensus 278 D~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~---------------------------~~~~i~IiaKIEt~~gv 330 (577)
|..+|+++++.|+|+|++|||++++|++++++.+.. .+.++.++++|||++|+
T Consensus 79 ~~~~i~~~l~~g~~~I~~P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~av 158 (267)
T 2vws_A 79 SKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTAL 158 (267)
T ss_dssp CHHHHHHHHHTTCCEEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHHH
T ss_pred CHHHHHHHHHhCCCEEEeCCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHHH
Confidence 568999999999999999999999999999887631 12347899999999999
Q ss_pred hhHHHHHHh--cCEEEEcCCCccCCCCC------CcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHH
Q 008112 331 PNLHSIITA--SDGAMVARGDLGAELPI------EEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIA 402 (577)
Q Consensus 331 ~NldeIl~~--sDGImIaRGDLg~elg~------e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~ 402 (577)
+|+++|+++ +|+++||++||+.++|. +.+..++++++.+|+++|||+++.+. .| ....
T Consensus 159 ~~~~eIa~~~gvd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~~v~~~---------d~-----~~a~ 224 (267)
T 2vws_A 159 DNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAV---------AP-----DMAQ 224 (267)
T ss_dssp HTHHHHHTSTTCCEEEECHHHHHHHTTCSSSCCTHHHHHHHHHHHHHHHHTTCEEEEECS---------SH-----HHHH
T ss_pred HHHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEecC---------CH-----HHHH
Confidence 999999987 99999999999999986 35888999999999999999987321 11 2455
Q ss_pred HHHHhccceEEecccc
Q 008112 403 IAVREGADAVMLSGET 418 (577)
Q Consensus 403 nav~~G~D~imLs~ET 418 (577)
.++.+|++.+.++.++
T Consensus 225 ~~~~~G~~~~s~~~d~ 240 (267)
T 2vws_A 225 QCLAWGANFVAVGVDT 240 (267)
T ss_dssp HHHHTTCCEEEEEEHH
T ss_pred HHHHCCCCEEEEchHH
Confidence 7888999999988654
No 14
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=99.64 E-value=4.8e-16 Score=157.40 Aligned_cols=129 Identities=22% Similarity=0.293 Sum_probs=110.2
Q ss_pred CHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHH---------------------------hcCCCceEEEeecChhhH
Q 008112 278 DWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLK---------------------------SCGADIHVIVKIESADSI 330 (577)
Q Consensus 278 D~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~---------------------------~~~~~i~IiaKIEt~~gv 330 (577)
|..||+++++.|+|+|++|||++++|++++.+.++ ..+.++.++++|||++|+
T Consensus 77 ~~~di~~~ld~G~~gI~lP~v~saed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v~~mIEt~~av 156 (261)
T 3qz6_A 77 DRAHVQRLLDIGAEGFMIPGVQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKAV 156 (261)
T ss_dssp CHHHHHHHHHHTCCEEEETTCCSHHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEEEEEECCHHHH
T ss_pred CHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEEEEEECCHHHH
Confidence 33699999999999999999999999999988763 224578999999999999
Q ss_pred hhHHHHHHh--cCEEEEcCCCccCCCCCC------cHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHH
Q 008112 331 PNLHSIITA--SDGAMVARGDLGAELPIE------EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIA 402 (577)
Q Consensus 331 ~NldeIl~~--sDGImIaRGDLg~elg~e------~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~ 402 (577)
.|+++|+++ +|+++||++||+.++|.. .+..++++++.+|+++|||+++.+. .|..++ .
T Consensus 157 ~~~~eIaa~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~g~~~~---------~~~~~~----~ 223 (261)
T 3qz6_A 157 EDIDSILAVQGVDAVIFGPRDLSNDLGIIGQTEHPKVYECYEKVYRAADRQGVVKGFFTA---------ADAAKM----G 223 (261)
T ss_dssp HTHHHHHTSTTCCEEEECHHHHHHHTTCTTCTTCHHHHHHHHHHHHHHHHHTCEEEEEES---------SCGGGG----H
T ss_pred HHHHHHhCCCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeC---------CHHHHH----H
Confidence 999999964 999999999999999874 6889999999999999999987542 344431 3
Q ss_pred HHHHhccceEEeccccC
Q 008112 403 IAVREGADAVMLSGETA 419 (577)
Q Consensus 403 nav~~G~D~imLs~ETa 419 (577)
..+..|++.+.++.|+.
T Consensus 224 ~~~~~G~~~~s~~~D~~ 240 (261)
T 3qz6_A 224 WAVERGAQMLLWSGDVA 240 (261)
T ss_dssp HHHHTTCCEEEEEEHHH
T ss_pred HHHHCCCCEEEEhhHHH
Confidence 56889999999998754
No 15
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=99.63 E-value=8.6e-16 Score=154.87 Aligned_cols=129 Identities=21% Similarity=0.232 Sum_probs=109.9
Q ss_pred ccCHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHH--------------------------hcCCCceEEEeecChhh
Q 008112 276 EKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLK--------------------------SCGADIHVIVKIESADS 329 (577)
Q Consensus 276 ekD~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~--------------------------~~~~~i~IiaKIEt~~g 329 (577)
+.|..+|+++++.|+++|++|||++++|++++++.+. ..+.++.++++|||++|
T Consensus 78 ~~~~~~i~~~l~~g~~gI~~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~a 157 (256)
T 1dxe_A 78 TNEPVIIKRLLDIGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQG 157 (256)
T ss_dssp SSCHHHHHHHHHTTCCEEEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHH
T ss_pred CCCHHHHHHHHhcCCceeeecCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHH
Confidence 4566779999999999999999999999999988774 12457899999999999
Q ss_pred HhhHHHHHHh--cCEEEEcCCCccCCCCCC------cHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHH
Q 008112 330 IPNLHSIITA--SDGAMVARGDLGAELPIE------EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDI 401 (577)
Q Consensus 330 v~NldeIl~~--sDGImIaRGDLg~elg~e------~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv 401 (577)
++|+++|+++ +|+++||++||+.++|.. .+..++++++.+|+++|||+++.+. + -.+.
T Consensus 158 v~~~~eIa~~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~a~G~~~~v~~~-----------d---~~~~ 223 (256)
T 1dxe_A 158 VDNVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILAP-----------V---EADA 223 (256)
T ss_dssp HHTHHHHHTSTTCCEEEECHHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCEEEECC-----------S---HHHH
T ss_pred HHhHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCceEEecC-----------C---HHHH
Confidence 9999999984 999999999999999863 5889999999999999999986321 1 2245
Q ss_pred HHHHHhccceEEecccc
Q 008112 402 AIAVREGADAVMLSGET 418 (577)
Q Consensus 402 ~nav~~G~D~imLs~ET 418 (577)
..++..|++.+.++.++
T Consensus 224 ~~~~~~G~~~~s~~~d~ 240 (256)
T 1dxe_A 224 RRYLEWGATFVAVGSDL 240 (256)
T ss_dssp HHHHHTTCCEEEEEEHH
T ss_pred HHHHHcCCCEEEechHH
Confidence 67889999999988664
No 16
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=99.55 E-value=6.5e-15 Score=150.42 Aligned_cols=132 Identities=13% Similarity=0.107 Sum_probs=109.5
Q ss_pred ccCHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHH--hcCEEEEcCCCccCC
Q 008112 276 EKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT--ASDGAMVARGDLGAE 353 (577)
Q Consensus 276 ekD~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~--~sDGImIaRGDLg~e 353 (577)
+++.+||+++++ |+|+|++|||++++|++++++++...|.++.++++|||++|+.|+++|++ .+|+++||++||+.+
T Consensus 81 ~~~~~dl~~~l~-g~~~i~lPkv~s~~~v~~~~~~l~~~g~~~~i~~~IEt~~av~~~~eIa~~~~vd~l~iG~~DL~~~ 159 (284)
T 1sgj_A 81 PYFEDDLSVLTP-ELSGVVVPKLEMGAEARQVAQMLQERSLPLPILAGLETGAGVWNAREIMEVPEVAWAYFGAEDYTTD 159 (284)
T ss_dssp TTHHHHGGGCCT-TSSEEEECSCCSHHHHHHHHHHHHHTTCCCCEEEEECSHHHHHTHHHHHTSTTEEEEEECHHHHHHH
T ss_pred HhHHHHHHHHhc-cCCEEEeCCCCCHHHHHHHHHHHHhcCCCeEEEEEecCHHHHHHHHHHHcCCCCcEEEECHHHHHHH
Confidence 678899999999 99999999999999999999999877778999999999999999999997 489999999999999
Q ss_pred CCC------CcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEe
Q 008112 354 LPI------EEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML 414 (577)
Q Consensus 354 lg~------e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imL 414 (577)
++. +.+..++++++.+|+++|||+|.. +...+ .-...-..+...+...|+|+-+.
T Consensus 160 lg~~~~~~~~~~~~a~~~iv~aa~a~G~~~i~~--v~~~~----~d~~~l~~~~~~~~~~Gf~Gk~~ 220 (284)
T 1sgj_A 160 LGGKRTPGGLEVLYARSQVALAARLTGVAALDI--VVTAL----NDPETFRADAEQGRALGYSGKLC 220 (284)
T ss_dssp HTCCCCSSCGGGHHHHHHHHHHHHHHTCEEEEC--CCCCC----SCHHHHHHHHHHHHHTTCSEEEE
T ss_pred hCCCCCCChHHHHHHHHHHHHHHHHcCCCeeeC--CcCCC----CCHHHHHHHHHHHHhCCCCcccc
Confidence 987 579999999999999999998632 11000 00111114566788999986555
No 17
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=99.29 E-value=4.6e-12 Score=131.97 Aligned_cols=133 Identities=17% Similarity=0.173 Sum_probs=108.5
Q ss_pred CCCCccCHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHh-------c----CCCceEEEeecChhhHhhHHHHHHhc
Q 008112 272 PSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKS-------C----GADIHVIVKIESADSIPNLHSIITAS 340 (577)
Q Consensus 272 p~ltekD~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~-------~----~~~i~IiaKIEt~~gv~NldeIl~~s 340 (577)
|.+.+.|.+.|..+++.|.+.|++|+|+++++++++++.+.. . +.++.++++|||+.|+.|+|+|++++
T Consensus 118 p~~~~~ql~Ai~ra~~~G~~~ImvPmV~s~~E~~~a~~~v~~~~~~~r~~G~~~~~~~~vg~mIEtp~av~~~d~Ia~~v 197 (324)
T 2xz9_A 118 PDIFKTQLRAILRASAYGNVQIMYPMISSVEEVRKANSILEEVKAELDREGVKYDKEIKVGIMVEIPSAAVTADILAKEV 197 (324)
T ss_dssp HHHHHHHHHHHHHHGGGSCEEEEECSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCTTCEEEEEECSHHHHHTHHHHTTTC
T ss_pred hhhHHHHHHHHHHHHhCCCCEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHhC
Confidence 455566777888999999999999999999998888887742 1 23689999999999999999999999
Q ss_pred CEEEEcCCCccC-CCCC---------------CcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHH
Q 008112 341 DGAMVARGDLGA-ELPI---------------EEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIA 404 (577)
Q Consensus 341 DGImIaRGDLg~-elg~---------------e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~na 404 (577)
|+++||..||+. .++. +.|..+.++++.+|+++|||+.++.++- . .| ..+..+
T Consensus 198 D~~siGtnDLtq~~lg~dR~~~~~~~~~~~~~p~v~~ai~~vv~aar~aG~~vgvcge~~----~--dp-----~~~~~l 266 (324)
T 2xz9_A 198 DFFSIGTNDLTQYTLAVDRMNEHVKEYYQPFHPAILRLVKMVIDAAHKEGKFAAMCGEMA----G--DP-----LAAVIL 266 (324)
T ss_dssp SEEEECHHHHHHHHTTCCTTCGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGGG----G--CH-----HHHHHH
T ss_pred cEEEECHHHHHHHHhCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHCCceeecCccC----C--CH-----HHHHHH
Confidence 999999999984 3341 2477888999999999999999887642 1 12 345678
Q ss_pred HHhccceEEec
Q 008112 405 VREGADAVMLS 415 (577)
Q Consensus 405 v~~G~D~imLs 415 (577)
+..|+|.+..+
T Consensus 267 ~~lG~~~~si~ 277 (324)
T 2xz9_A 267 LGLGLDEFSMS 277 (324)
T ss_dssp HHHTCCEEEEC
T ss_pred HHCCCCEEEEC
Confidence 89999997665
No 18
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=99.19 E-value=2.7e-11 Score=125.75 Aligned_cols=133 Identities=20% Similarity=0.244 Sum_probs=106.4
Q ss_pred CccCHHHHHHHHhcCC--CEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh---cCEEEEcCCC
Q 008112 275 TEKDWDDIKFGVDNKV--DFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA---SDGAMVARGD 349 (577)
Q Consensus 275 tekD~~dI~~al~~gv--D~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~---sDGImIaRGD 349 (577)
|++..+||+..++.|. |+|.+|+|++++|++.+.+++...+.++.++++|||++|+.|+++|++. .|++++|..|
T Consensus 113 t~~~~~Dl~~~l~~g~~~~gIvlPKvesa~~v~~~~~~l~~~~~~~~l~~~IET~~gv~~~~eIa~a~~~v~~l~~G~~D 192 (316)
T 3qll_A 113 TRAGIEDIHALLECGSLPDYLVLPKTESAAHLQILDRLMMFAGSDTRLIGIIESVRGLNAVESIAAATPKLAGLIFGAAD 192 (316)
T ss_dssp SHHHHHHHHHHHHSCCCCSEEEETTCCSHHHHHHHHHHTSCC--CCEEEEEECSHHHHHTHHHHHTSCTTEEEEEECHHH
T ss_pred CchhHHHHHHHHhCCCCCCEEEeCCCCCHHHHHHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHHHhcCCCceEEEECHHH
Confidence 5666789999999885 9999999999999999999987777789999999999999999999983 7899999999
Q ss_pred ccCCCCCC----cHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCCh-HhHHHHHHHHHhccceEEe
Q 008112 350 LGAELPIE----EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTR-AEVSDIAIAVREGADAVML 414 (577)
Q Consensus 350 Lg~elg~e----~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~Ptr-AEv~Dv~nav~~G~D~imL 414 (577)
|+.++|.. .+..+..+++.+|+++|++++.. - ... .-.. .-..++..+...|+++=+.
T Consensus 193 L~~~lG~~~~~~~l~~ar~~iv~AaraaGi~~id~-v-~~~-----~~D~~gl~~e~~~~r~lGf~Gk~~ 255 (316)
T 3qll_A 193 MAADIGAASTWEPLALARARLVSACAMNGIPAIDA-P-FFD-----VHDVSGLQSETLRASDFGFSAKAA 255 (316)
T ss_dssp HHHHHTCCSSHHHHHHHHHHHHHHHHHHTCCEEEC-C-CSC-----SSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHhCCCCCcHHHHHHHHHHHHHHHHcCCceeec-c-ccC-----cCCHHHHHHHHHHHHHCCCCeEEe
Confidence 99999875 47788889999999999998542 1 110 1110 1134677788899987655
No 19
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=99.13 E-value=9.5e-11 Score=119.19 Aligned_cols=125 Identities=19% Similarity=0.113 Sum_probs=99.9
Q ss_pred CccCHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh--cCEEEEcCCCccC
Q 008112 275 TEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGAMVARGDLGA 352 (577)
Q Consensus 275 tekD~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~--sDGImIaRGDLg~ 352 (577)
|++-.+||+..++.|+|+|.+|+|++++|++.+. ++.++++|||++|+.|+++|+.. .|++++|+.||+.
T Consensus 70 ~~~~~~dl~~~~~~g~~gi~lPKv~s~~~v~~~~--------~~~i~~~IET~~~v~~~~eIaa~~~v~~l~~G~~Dl~~ 141 (273)
T 1u5h_A 70 TADQARDLEALAGTAYTTVMLPKAESAAQVIELA--------PRDVIALVETARGAVCAAEIAAADPTVGMMWGAEDLIA 141 (273)
T ss_dssp CHHHHHHHHHHHTSCCCEEEETTCCCHHHHHTTT--------TSEEEEEECSHHHHHTHHHHHHSTTEEEEEECHHHHHH
T ss_pred chHHHHHHHHHHhcCCCEEEeCCCCCHHHHHHHh--------hCCEEEEEeCHHHHHhHHHHhcCCCCcEEEecHHHHHH
Confidence 3455688999999999999999999999998774 68899999999999999999964 7899999999999
Q ss_pred CCCCC-----------cHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCCh-HhHHHHHHHHHhccceEEe
Q 008112 353 ELPIE-----------EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTR-AEVSDIAIAVREGADAVML 414 (577)
Q Consensus 353 elg~e-----------~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~Ptr-AEv~Dv~nav~~G~D~imL 414 (577)
++|.. .+..+..+++.+|+++|++++... . ...... .-..+...+...|+|+-++
T Consensus 142 ~lG~~~~~~~~~~~~~~~~~a~~~iv~aaraaG~~aid~v--~-----~~~~d~~gl~~~~~~~~~~Gf~Gk~~ 208 (273)
T 1u5h_A 142 TLGGSSSRRADGAYRDVARHVRSTILLAASAFGRLALDAV--H-----LDILDVEGLQEEARDAAAVGFDVTVC 208 (273)
T ss_dssp HHTCSCSBCTTSCBCHHHHHHHHHHHHHHHHTTCEEEECC--C-----SCTTCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HhCCCCCCCccccccHHHHHHHHHHHHHHHHcCCCcccCC--c-----CCCCCHHHHHHHHHHHHhCCCCceee
Confidence 88753 267788899999999999986421 0 001111 1124577788999998777
No 20
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha}
Probab=99.09 E-value=2.2e-10 Score=119.64 Aligned_cols=133 Identities=14% Similarity=0.081 Sum_probs=102.6
Q ss_pred CccCHHHHHHHHhc---CCCEEEEcCCCCHHHHHHHHHHHHhc----C--CCceEEEeecChhhHhhHHHHHHh--cCEE
Q 008112 275 TEKDWDDIKFGVDN---KVDFYAVSFVKDAQVVHELKNYLKSC----G--ADIHVIVKIESADSIPNLHSIITA--SDGA 343 (577)
Q Consensus 275 tekD~~dI~~al~~---gvD~I~~SfV~sa~dv~~lr~~l~~~----~--~~i~IiaKIEt~~gv~NldeIl~~--sDGI 343 (577)
|++-.+||...++. |+|+|.+|+|++++|++.+.+++... | ..+.++++|||++|+.|+++|++. .|++
T Consensus 94 t~~~~~DL~av~~~~~~g~dgI~LPKvesa~dv~~~~~~l~~~e~~~G~~~~i~l~~~IET~~gv~~~~eIaa~~rv~~L 173 (332)
T 3qqw_A 94 HPAWRQDVDIIVNGAGGRLAYITVPKATNSGQVAEVIRYIGDVAKRAGLDKPVPVHVLIETHGALRDVFQIAELPNIEVL 173 (332)
T ss_dssp STTHHHHHHHHHHHSTTCCCCEEECCCCSHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHTTSTTEEEE
T ss_pred ChHHHHHHHHHHhhcccCCCEEEeCCCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEecCHHHHHHHHHHhcCcCCCEE
Confidence 55667788887776 99999999999999999999888643 2 468899999999999999999954 7899
Q ss_pred EEcCCCccCCCCCC---------------cHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChH-hHHHHHHHH-H
Q 008112 344 MVARGDLGAELPIE---------------EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRA-EVSDIAIAV-R 406 (577)
Q Consensus 344 mIaRGDLg~elg~e---------------~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrA-Ev~Dv~nav-~ 406 (577)
++|..||..+++.. .+..++.+++.+|+++|+++|.. -. ...-... --.+...+. .
T Consensus 174 ~~G~~DL~~~lg~~~~~~~~~~~g~~~~p~l~~ar~~vv~AAraaGi~~id~-v~------~d~~D~~gl~~~~~~~~~~ 246 (332)
T 3qqw_A 174 DFGLMDFVSGHHGAIPAAAMRSPGQFEHALLVRAKADMVAAALANGIVPAHN-VC------LNLKDAEVIASDACRARNE 246 (332)
T ss_dssp EECHHHHHHTTTTCSCGGGGSTTGGGTSHHHHHHHHHHHHHHHHTTCEEEEC-CC------SCSSCHHHHHHHHHHHHHH
T ss_pred EEcHHHHHHHhCCCccccccCCCCcccCHHHHHHHHHHHHHHHHhCCCcccC-Cc------ccccCHHHHHHHHHHHHHh
Confidence 99999999888752 15678889999999999998642 10 0011111 114466677 7
Q ss_pred hccceEEe
Q 008112 407 EGADAVML 414 (577)
Q Consensus 407 ~G~D~imL 414 (577)
.|+|+-+.
T Consensus 247 lGf~Gk~~ 254 (332)
T 3qqw_A 247 FGFLRMWS 254 (332)
T ss_dssp HCCCEEEE
T ss_pred CCCCcccc
Confidence 89997665
No 21
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=99.06 E-value=2e-10 Score=132.32 Aligned_cols=134 Identities=19% Similarity=0.205 Sum_probs=111.2
Q ss_pred CCccCHHHHHHHHh-cC--CCEEEEcCCCCHHHHHHHHHHHHhcCC----C-ceEEEeecChhhHhhHHHHHHhcCEEEE
Q 008112 274 ITEKDWDDIKFGVD-NK--VDFYAVSFVKDAQVVHELKNYLKSCGA----D-IHVIVKIESADSIPNLHSIITASDGAMV 345 (577)
Q Consensus 274 ltekD~~dI~~al~-~g--vD~I~~SfV~sa~dv~~lr~~l~~~~~----~-i~IiaKIEt~~gv~NldeIl~~sDGImI 345 (577)
+.+.+.+.|..+.+ .| .+.|++|||+++++++++++.+...|. + +.++++||++.|+.|+|+|++++|+++|
T Consensus 622 ~~~~ql~Ai~ra~~~~G~~~~~ImvP~V~t~~E~~~~~~~l~~~g~~~~~~~~~vg~MIEtp~a~~~ad~ia~~vD~~si 701 (794)
T 2ols_A 622 CFALECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCELPSNAVLAEQFLQYFDGFSI 701 (794)
T ss_dssp HHHHHHHHHHHHHHTSCCTTEEEEECCCCSHHHHHHHHHHHHHTTCCTTGGGCCEEEEECSHHHHHTHHHHHTTSSEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCCCCHHHHHHHHHHHHhcCcccCccCCEEEEEECcHHHHHHHHHHHHhCCEEEE
Confidence 33446667778888 68 799999999999999999999987653 3 8899999999999999999999999999
Q ss_pred cCCCccCC-CCCC---------------cHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhcc
Q 008112 346 ARGDLGAE-LPIE---------------EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGA 409 (577)
Q Consensus 346 aRGDLg~e-lg~e---------------~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~ 409 (577)
|..||+.. ++.. .|..+.++++.+|+++|||+.++.++--. .| ..+..++..|+
T Consensus 702 GtnDLtq~tlg~~R~~~~~~~~~~~~~p~v~~~i~~~v~aar~~g~~vgicGe~~~~-----dp-----~~~~~~~~~G~ 771 (794)
T 2ols_A 702 GSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAISACRKQNKYVGICGQGPSD-----HP-----DFAKWLVEEGI 771 (794)
T ss_dssp EHHHHHHHHHTCCTTCTTTGGGCCTTSHHHHHHHHHHHHHHHTTTCEEEEESSHHHH-----CH-----HHHHHHHHHTC
T ss_pred CHHHHHHHHhCCCCCcchhccccCCCCHHHHHHHHHHHHHHHHhCCEEEEecccCCC-----CH-----HHHHHHHHCCC
Confidence 99999887 7753 47788899999999999999998876420 11 22556889999
Q ss_pred ceEEeccc
Q 008112 410 DAVMLSGE 417 (577)
Q Consensus 410 D~imLs~E 417 (577)
|.+.++.+
T Consensus 772 ~~~s~~p~ 779 (794)
T 2ols_A 772 ESVSLNPD 779 (794)
T ss_dssp CEEEECGG
T ss_pred CEEEECHh
Confidence 99988733
No 22
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=99.00 E-value=1.3e-09 Score=114.06 Aligned_cols=133 Identities=13% Similarity=0.153 Sum_probs=99.0
Q ss_pred CccCHHHHHHHHhc---CCCEEEEcCCCCHHHHHHHHHHHHhc----C--CCceEEEeecChhhHhhHHHHHHh--cCEE
Q 008112 275 TEKDWDDIKFGVDN---KVDFYAVSFVKDAQVVHELKNYLKSC----G--ADIHVIVKIESADSIPNLHSIITA--SDGA 343 (577)
Q Consensus 275 tekD~~dI~~al~~---gvD~I~~SfV~sa~dv~~lr~~l~~~----~--~~i~IiaKIEt~~gv~NldeIl~~--sDGI 343 (577)
|++..+||...++. |+|+|.+|+|++++|++.+.+++... | ..+.++++|||++|+.|+++|++. .|++
T Consensus 93 t~~~~~DL~al~~~~~~g~~~I~LPKves~~dv~~~~~~l~~~e~~~G~~~~~~l~~~IET~~gv~~~~eIAa~~rv~~L 172 (339)
T 3r4i_A 93 HAHWRDDVRLILRAAKRAPAYITLPKIRHVHDAAEMVAFIEATRRELGIAQPVPVQLLVETHGALTRVFDLAALPGVEAL 172 (339)
T ss_dssp STTHHHHHHHHHHHCSSCCSCEEECC-CCHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHHTCTTEEEE
T ss_pred ccHHHHHHHHhhhhccCCCCEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeccHHHHHhHHHHHcCcCCCEE
Confidence 44566788877765 79999999999999999998888542 2 358899999999999999999953 8899
Q ss_pred EEcCCCccCCCCCC---------------cHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChH-hHHHHHHHH-H
Q 008112 344 MVARGDLGAELPIE---------------EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRA-EVSDIAIAV-R 406 (577)
Q Consensus 344 mIaRGDLg~elg~e---------------~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrA-Ev~Dv~nav-~ 406 (577)
++|..||..+++.. .+..++.+++.+|+++|++++.. +. ...-..+ --.+...+. .
T Consensus 173 ~~G~~DL~~~lg~~~~~~~~~~~~~~~~p~~~~a~~~iv~AAraaGi~~id~--v~-----~d~~D~~gl~~~~~~~~~~ 245 (339)
T 3r4i_A 173 SFGLMDFVSAHDGAIPDTAMRSPGQFDHPLVRRAKLEISAACHAYGKVPSHN--VS-----TEVRDMSVVANDAARARNE 245 (339)
T ss_dssp EECHHHHHHTTTTSSCGGGGSTTHHHHSHHHHHHHHHHHHHHHHTTCEEEEC--CC-----CCSSCHHHHHHHHHHHHHT
T ss_pred EECHHHHHHHhCCCcCccccCCCccccCHHHHHHHHHHHHHHHHcCCCCccC--CC-----cCCCChHHHHHHHHHHHHh
Confidence 99999999988752 15667789999999999998642 11 0010111 112445565 6
Q ss_pred hccceEEe
Q 008112 407 EGADAVML 414 (577)
Q Consensus 407 ~G~D~imL 414 (577)
.|+|+-+.
T Consensus 246 lGf~Gk~~ 253 (339)
T 3r4i_A 246 FGYTRMWS 253 (339)
T ss_dssp TCCSEEEE
T ss_pred CCCCccee
Confidence 89997654
No 23
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=98.92 E-value=1.1e-09 Score=121.83 Aligned_cols=130 Identities=14% Similarity=0.112 Sum_probs=105.2
Q ss_pred CccCHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHh-------cC----CCceEEEeecChhhHhhHHHHHHhcCEE
Q 008112 275 TEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKS-------CG----ADIHVIVKIESADSIPNLHSIITASDGA 343 (577)
Q Consensus 275 tekD~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~-------~~----~~i~IiaKIEt~~gv~NldeIl~~sDGI 343 (577)
.+.+.+.|..+.+.|...|++|||.++++++++++.+.+ .| .++.+.++||++.|+.++|+|++.+|++
T Consensus 370 f~~QlrAi~rA~~~G~~~Im~PmV~t~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~vDf~ 449 (575)
T 2hwg_A 370 LRDQLRAILRASAFGKLRIMFPMIISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEVDFF 449 (575)
T ss_dssp HHHHHHHHHHHTTSSCEEEEESSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCTTCEEEEEECSHHHHHTHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHhCCEE
Confidence 334446688888899999999999999998888887742 23 3688999999999999999999999999
Q ss_pred EEcCCCccC----------CCCC------CcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHh
Q 008112 344 MVARGDLGA----------ELPI------EEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVRE 407 (577)
Q Consensus 344 mIaRGDLg~----------elg~------e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~ 407 (577)
.||..||.. .++. +.|..+.++++.+|+++|||++++.++- ..|.- +..++..
T Consensus 450 siGtNDLtqy~la~dR~~~~l~~~~dp~~paVl~li~~vv~aa~~~g~~vgvCGe~a------gdp~~-----~~~l~~l 518 (575)
T 2hwg_A 450 SIGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGELA------GDERA-----TLLLLGM 518 (575)
T ss_dssp EECHHHHHHHHHTCCTTCGGGGGGCCSSSHHHHHHHHHHHHHHHHTTCEEEECSTTT------TCTTT-----HHHHHHT
T ss_pred EECHHHHHHHHhCcCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCCCC------CCHHH-----HHHHHHC
Confidence 999999987 4432 2577888999999999999999977622 23433 4467889
Q ss_pred ccceEEec
Q 008112 408 GADAVMLS 415 (577)
Q Consensus 408 G~D~imLs 415 (577)
|+|.+..+
T Consensus 519 G~~~~S~~ 526 (575)
T 2hwg_A 519 GLDEFSMS 526 (575)
T ss_dssp TCCEEEEC
T ss_pred CCCEEEEC
Confidence 99997776
No 24
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=98.92 E-value=1.2e-09 Score=121.50 Aligned_cols=126 Identities=17% Similarity=0.103 Sum_probs=102.7
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHh-----------cCCCceEEEeecChhhHhhHHHHHHhcCEEEEcC
Q 008112 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKS-----------CGADIHVIVKIESADSIPNLHSIITASDGAMVAR 347 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~-----------~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIaR 347 (577)
.+.|..+.+.|...|++|||.++++++++++.+.. .+.++.+.++||++.|+.++|+|++++|++.||.
T Consensus 376 lrAi~rA~~~G~~~Im~PmV~s~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~vDf~siGt 455 (572)
T 2wqd_A 376 LRALLRASVYGKLNIMFPMVATINEFREAKAILLEEKENLKNEGHDISDDIELGIMVEIPATAALADVFAKEVDFFSIGT 455 (572)
T ss_dssp HHHHHHHTTTSCEEEEESCCCSHHHHHHHHHHHHHHHHHHHHHTCCCCSCCEEEEEECCHHHHHTHHHHHHHCSEEEECH
T ss_pred HHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEEccHHHHHHHHHHHHhCCEEEECH
Confidence 35578888899999999999999999988887631 1246889999999999999999999999999999
Q ss_pred CCccC-CCC---------------CCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccce
Q 008112 348 GDLGA-ELP---------------IEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADA 411 (577)
Q Consensus 348 GDLg~-elg---------------~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~ 411 (577)
.||+- .++ .+.|..+.++++.+|+++|||++++.++- ..|.- +..++..|+|.
T Consensus 456 NDLtQ~~lg~dR~~~~v~~~~dp~~paVl~li~~vv~aa~~~g~~vgiCGe~a------gdp~~-----~~~l~~lG~~~ 524 (572)
T 2wqd_A 456 NDLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTGMCGEMA------GDETA-----IPLLLGLGLDE 524 (572)
T ss_dssp HHHHHHHHTCCSSSGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGGG------GCTTT-----HHHHHHHTCCE
T ss_pred HHHHHHHhccCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCCcc------CCHHH-----HHHHHHCCCCE
Confidence 99982 122 12477888999999999999999987633 23444 44778899999
Q ss_pred EEec
Q 008112 412 VMLS 415 (577)
Q Consensus 412 imLs 415 (577)
+..+
T Consensus 525 ~S~~ 528 (572)
T 2wqd_A 525 FSMS 528 (572)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9876
No 25
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A
Probab=98.81 E-value=6.5e-09 Score=111.30 Aligned_cols=133 Identities=11% Similarity=0.098 Sum_probs=104.9
Q ss_pred Ccc-CHHHHHHHHh------cCCCEEEEcCCCCHHHHHHHHHHHHhc----C---CCceEEEeecChhh---HhhHHHHH
Q 008112 275 TEK-DWDDIKFGVD------NKVDFYAVSFVKDAQVVHELKNYLKSC----G---ADIHVIVKIESADS---IPNLHSII 337 (577)
Q Consensus 275 tek-D~~dI~~al~------~gvD~I~~SfV~sa~dv~~lr~~l~~~----~---~~i~IiaKIEt~~g---v~NldeIl 337 (577)
|++ ..+||...+. .++|+|.+|+|++++|+..+.+.+... | ..+.++++|||++| +.|+++|+
T Consensus 94 T~~~~~~DL~al~~~~~~a~~~~dgIvLPKvesa~dV~~l~~~L~~~E~~~Gl~~G~i~lialIETa~g~~~L~na~eIA 173 (433)
T 3oyz_A 94 TRYQGFQHMLDITDPERGAVEHIHGFVIPEVGGIDDWKKADEFFTIVEHEHGLDEGSLAMSVIIESGEAELAMGDLRDEM 173 (433)
T ss_dssp HHHHHHHHHHHHTCGGGSCGGGCCEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCSEEEEEECSHHHHHHGGGHHHHH
T ss_pred ChhccHHHHHHHhccccccccCCCEEEeCCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEEEeChhHHHHHHHHHHHH
Confidence 556 6788988877 789999999999999999998887532 2 25889999999999 99999999
Q ss_pred Hh-------cCEEEEcCCCccCCCCCC-------cHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCCh-HhHHHHH
Q 008112 338 TA-------SDGAMVARGDLGAELPIE-------EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTR-AEVSDIA 402 (577)
Q Consensus 338 ~~-------sDGImIaRGDLg~elg~e-------~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~Ptr-AEv~Dv~ 402 (577)
.+ ++|+++|+.||+.++|.. .+..+..+++.+|+++|+++|..- ....-.. .-..++.
T Consensus 174 aasr~~~pRV~gL~~G~~DLsasLG~~~~~~~~~el~~ARs~IVlAARAaGi~aIDgV-------~~di~D~egL~~ea~ 246 (433)
T 3oyz_A 174 GKPTNNLERLFLLVDGEVDYTKDMRAMTPTGELPAWPELRHNTSRGASAAGCVAVDGP-------YDDIRDVEGYRERMT 246 (433)
T ss_dssp HCTTCCGGGEEEEEECHHHHHHHHTCCCTTCCCCCCHHHHHHHHHHHHHHTCEEEECC-------CCCTTCHHHHHHHHH
T ss_pred hhhccCCCCeEEEEECHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhCCCccccc-------ccCCCCHHHHHHHHH
Confidence 76 469999999998888754 477888999999999999986421 0011111 1124677
Q ss_pred HHHHhccceEEe
Q 008112 403 IAVREGADAVML 414 (577)
Q Consensus 403 nav~~G~D~imL 414 (577)
.+...|+++-+.
T Consensus 247 ~ar~lGF~GK~~ 258 (433)
T 3oyz_A 247 DNQAKGMLGIWS 258 (433)
T ss_dssp HHHTTTCCEEEE
T ss_pred HHHhCCCCceEe
Confidence 788999999776
No 26
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=98.33 E-value=2.3e-06 Score=99.40 Aligned_cols=118 Identities=18% Similarity=0.099 Sum_probs=95.1
Q ss_pred CCC---EEEEcCCCCHHHHHHHHHHHHh--------cC--CCceEEEeecChhhHhhHHHHHHhcCEEEEcCCCcc-CCC
Q 008112 289 KVD---FYAVSFVKDAQVVHELKNYLKS--------CG--ADIHVIVKIESADSIPNLHSIITASDGAMVARGDLG-AEL 354 (577)
Q Consensus 289 gvD---~I~~SfV~sa~dv~~lr~~l~~--------~~--~~i~IiaKIEt~~gv~NldeIl~~sDGImIaRGDLg-~el 354 (577)
|.+ .|++|||+++++++.+++.+.. .| .++.+.++||++.|+.|+++|++.+|++.||..||. ..+
T Consensus 701 G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~G~~~~~~vg~MIEtP~a~l~adeIA~~vDf~siGtNDLtQ~~l 780 (876)
T 1vbg_A 701 GVQVFPEIMVPLVGTPQELGHQVTLIRQVAEKVFANVGKTIGYKVGTMIEIPRAALVADEIAEQAEFFSFGTNDLTQMTF 780 (876)
T ss_dssp TCCCEEEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHH
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHHHHHh
Confidence 765 6999999999999999987642 23 358899999999999999999999999999999987 333
Q ss_pred CC----------------------------CcHHHHHHHHHHHHHHc--CCceEEEehhhHhhhcCCCCChHhHHHHHHH
Q 008112 355 PI----------------------------EEVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIA 404 (577)
Q Consensus 355 g~----------------------------e~v~~~qk~Ii~~c~~a--GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~na 404 (577)
+. +.|..+.+.++++|+++ |||+.++.++-- -|.- +.-.
T Consensus 781 g~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe~~g------dP~~-----~~~l 849 (876)
T 1vbg_A 781 GYSRDDVGKFIPVYLAQGILQHDPFEVLDQRGVGELVKFATERGRKARPNLKVGICGEHGG------EPSS-----VAFF 849 (876)
T ss_dssp TCCTTTGGGTHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEEESGGGG------SHHH-----HHHH
T ss_pred CCCCCchhhhHHHHhhcccccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEcCCcCC------CHHH-----HHHH
Confidence 32 34677788899999998 999999987541 2322 4568
Q ss_pred HHhccceEEeccc
Q 008112 405 VREGADAVMLSGE 417 (577)
Q Consensus 405 v~~G~D~imLs~E 417 (577)
+..|.|.+-+|..
T Consensus 850 ~~~Gl~~vS~sp~ 862 (876)
T 1vbg_A 850 AKAGLDYVSCSPF 862 (876)
T ss_dssp HHTTCSEEEECGG
T ss_pred HHcCCCEEEECcc
Confidence 8999999988843
No 27
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=98.19 E-value=6.5e-06 Score=95.61 Aligned_cols=117 Identities=16% Similarity=0.173 Sum_probs=94.8
Q ss_pred CCC---EEEEcCCCCHHHHHHHHHHHHh--------cC--CCceEEEeecChhhHhhHHHHHHhcCEEEEcCCCcc-CCC
Q 008112 289 KVD---FYAVSFVKDAQVVHELKNYLKS--------CG--ADIHVIVKIESADSIPNLHSIITASDGAMVARGDLG-AEL 354 (577)
Q Consensus 289 gvD---~I~~SfV~sa~dv~~lr~~l~~--------~~--~~i~IiaKIEt~~gv~NldeIl~~sDGImIaRGDLg-~el 354 (577)
|.+ .|++|||+++++++.+++.+.+ .| .++.+.++||++.|+.++++|++.+|++.||-.||. ..+
T Consensus 695 G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~g~~~~~~vg~MIEtP~a~l~ad~iA~~vdf~siGtNDLtQ~~l 774 (873)
T 1kbl_A 695 GIDIVPEIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRAALTADAIAEEAEFFSFGTNDLTQMTF 774 (873)
T ss_dssp CCCCCCEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHH
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHHHHHh
Confidence 765 6999999999999999987742 23 358899999999999999999999999999999988 444
Q ss_pred CC----------------------------CcHHHHHHHHHHHHHHc--CCceEEEehhhHhhhcCCCCChHhHHHHHHH
Q 008112 355 PI----------------------------EEVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIA 404 (577)
Q Consensus 355 g~----------------------------e~v~~~qk~Ii~~c~~a--GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~na 404 (577)
+. +-|..+.+.++++|+++ |+||.++.++-- .|.- +.-.
T Consensus 775 g~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe~~g------dP~~-----~~~l 843 (873)
T 1kbl_A 775 GFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGICGEHGG------DPSS-----VEFC 843 (873)
T ss_dssp TCCHHHHHHHHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHCTTCEEEECSGGGG------SHHH-----HHHH
T ss_pred CCCCCchhhhHHHHHhccccccCchhhhchHHHHHHHHHHHHHHHHhCCCCeEEECCCCCC------CHHH-----HHHH
Confidence 43 24667778899999997 999999888541 2322 4567
Q ss_pred HHhccceEEecc
Q 008112 405 VREGADAVMLSG 416 (577)
Q Consensus 405 v~~G~D~imLs~ 416 (577)
+..|.|.+-+|.
T Consensus 844 ~~~Gl~~vS~sp 855 (873)
T 1kbl_A 844 HKVGLNYVSCSP 855 (873)
T ss_dssp HHTTCSEEEECG
T ss_pred HHcCCCEEEECh
Confidence 899999998873
No 28
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A*
Probab=97.82 E-value=7.4e-05 Score=82.21 Aligned_cols=135 Identities=13% Similarity=0.118 Sum_probs=93.7
Q ss_pred cCHHHHHHHHhcC-CCEEEEcCCCCHHHHHHHHHHHHh----cC---CCceEEEeecChhhHhhHHHHHHh----cCEEE
Q 008112 277 KDWDDIKFGVDNK-VDFYAVSFVKDAQVVHELKNYLKS----CG---ADIHVIVKIESADSIPNLHSIITA----SDGAM 344 (577)
Q Consensus 277 kD~~dI~~al~~g-vD~I~~SfV~sa~dv~~lr~~l~~----~~---~~i~IiaKIEt~~gv~NldeIl~~----sDGIm 344 (577)
.-..|++..+..| .++|.+|++++++|+..+.+.+.. .| ..+++++.|||+.|+.|+++|+.. +.|+.
T Consensus 193 ~~~~Dl~~l~~~g~g~~i~LPK~es~~Ev~~~~~~f~~~E~~lGlp~gtiki~vlIET~~a~~n~~eIa~al~~rv~gLn 272 (532)
T 3cuz_A 193 YFFHNYQALLAKGSGPYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLN 272 (532)
T ss_dssp HHHHHHHHHHHTTCCCEEEECCCCCHHHHHHHHHHHHHHHHHTTCCTTCSEEEEECCSHHHHTSHHHHHHHTTTTEEEEE
T ss_pred HHHHHHHHHHcCCCCCeEEccCCCCHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeccHHHHHhHHHHHHhccCCceEEE
Confidence 3445666555543 499999999999999999887742 22 247899999999999999999975 44999
Q ss_pred EcCCCccCCCCC-------------------CcHHHHHHHHH-HHHHHcCCceEE--EehhhHhhhcCCCCChH----hH
Q 008112 345 VARGDLGAELPI-------------------EEVPLLQEEII-RTCRSMGKAVIV--ATNMLESMIVHPTPTRA----EV 398 (577)
Q Consensus 345 IaRGDLg~elg~-------------------e~v~~~qk~Ii-~~c~~aGKPvi~--ATq~LeSM~~~~~PtrA----Ev 398 (577)
.|+.|+..++.. ..+..+..+++ .+|+++|++.|. +.+ +.. +.+.-..+ =.
T Consensus 273 ~G~~Dy~~s~i~~~~~~~~~~lpdr~~~~~~~~~l~Ay~~llv~ac~a~G~~aIdGm~a~-~p~--kD~e~~~~~~~~l~ 349 (532)
T 3cuz_A 273 CGRWDYIFSYIKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAAF-IPS--KDEEHNNQVLNKVK 349 (532)
T ss_dssp CCSHHHHHHHHHHTTTCGGGCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEECB-CCC--SSGGGCHHHHHHHH
T ss_pred cCHHHHHHHHHhhcccCCCccCccccccccchHHHHHHHHHHHHHHHHcCCCCccCcccc-CCC--CChhHHHHHHHHHH
Confidence 999998766510 11445555555 999999999876 321 100 00000000 22
Q ss_pred HHHHHHHHhccceEEe
Q 008112 399 SDIAIAVREGADAVML 414 (577)
Q Consensus 399 ~Dv~nav~~G~D~imL 414 (577)
.|......+|+|+-+.
T Consensus 350 ~dk~~~~~~GfdGkwv 365 (532)
T 3cuz_A 350 ADKSLEANNGHDGTWI 365 (532)
T ss_dssp HHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHCCCCcccc
Confidence 4566788999999888
No 29
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis}
Probab=97.66 E-value=0.0001 Score=81.05 Aligned_cols=127 Identities=16% Similarity=0.184 Sum_probs=90.6
Q ss_pred HHHHHH--hcCCCEEEEcCCCCHHHHHHHHHHHHhc----C---CCceEEEeecChhhHhhHHHHHHh----cCEEEEcC
Q 008112 281 DIKFGV--DNKVDFYAVSFVKDAQVVHELKNYLKSC----G---ADIHVIVKIESADSIPNLHSIITA----SDGAMVAR 347 (577)
Q Consensus 281 dI~~al--~~gvD~I~~SfV~sa~dv~~lr~~l~~~----~---~~i~IiaKIEt~~gv~NldeIl~~----sDGImIaR 347 (577)
|++..+ ..|+ +|.+|++++++|+..+.+.+... | ..+++.+.|||..|+-|++||+.. +.|+..||
T Consensus 194 dl~~l~~~~~gp-yi~LPK~es~~Ev~~~~~lf~~~E~~lGlp~gtIki~vlIET~~a~~n~~eI~~a~~~rv~gLn~G~ 272 (528)
T 3cux_A 194 NAKALLEKGSGP-YFYLPKMESYLEARLWNDVFVFAQKYIGIPNGTIKATVLLETIHASFEMDEILYELKDHSAGLNCGR 272 (528)
T ss_dssp HHHHHHHTTCCC-EEEECCCCSHHHHHHHHHHHHHHHHHHTCCTTCCEEEEEECSHHHHTSHHHHHHHTGGGEEEEEECS
T ss_pred HHHHHHhcCCCC-EEEccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEEeCCHHHHHhHHHHHHhccCceeEEecCH
Confidence 344444 3576 99999999999999998877432 2 258999999999999999999965 44999999
Q ss_pred CCccCCCCC------C--------------cHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCCh-----------H
Q 008112 348 GDLGAELPI------E--------------EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTR-----------A 396 (577)
Q Consensus 348 GDLg~elg~------e--------------~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~Ptr-----------A 396 (577)
.|+..++.. + -+....+.++.+|+++|++.|. .|. .+ .|.+ .
T Consensus 273 ~Dy~~s~i~t~~~~~~~vlpdR~~v~~~~p~~~ay~~~lV~ac~a~G~~aIg--Gm~-a~----ip~~~D~~~n~~~~~~ 345 (528)
T 3cux_A 273 WDYIFSFLKAFRNHNEFLLPDRAQVTMTAPFMRAYSLKVIQTCHRRNAPAIG--GMA-AQ----IPIKNNPEANEAAFEK 345 (528)
T ss_dssp HHHHHHHHHHTTTCTTCCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCCEEC--------------------------CH
T ss_pred HHHHHHhhhhccCCccccchhhhhcccccHHHHHHHHHHHHHHHHcCCCCcc--ccc-cc----CcCcCChHHHHHHHHH
Confidence 998776531 0 1445556688999999999875 121 11 2322 2
Q ss_pred hHHHHHHHHHhccceEEec
Q 008112 397 EVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 397 Ev~Dv~nav~~G~D~imLs 415 (577)
=..|......+|+||-++-
T Consensus 346 ~~~dk~~~~~~GfdGkwvi 364 (528)
T 3cux_A 346 VRADKEREALDGHDGTWVA 364 (528)
T ss_dssp HHHHHHHHHHHTCSBEEES
T ss_pred HHHHHHHHHhCCCCccccc
Confidence 2356677899999999983
No 30
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A
Probab=97.50 E-value=8e-05 Score=83.65 Aligned_cols=132 Identities=17% Similarity=0.119 Sum_probs=92.2
Q ss_pred HHHHHHHHhc--CCCEEEEcCCCCHHHHHHHHHHHHh----cC---CCceEEEeecChhhHhhHHHHHH-h---cCEEEE
Q 008112 279 WDDIKFGVDN--KVDFYAVSFVKDAQVVHELKNYLKS----CG---ADIHVIVKIESADSIPNLHSIIT-A---SDGAMV 345 (577)
Q Consensus 279 ~~dI~~al~~--gvD~I~~SfV~sa~dv~~lr~~l~~----~~---~~i~IiaKIEt~~gv~NldeIl~-~---sDGImI 345 (577)
..|++..+.. |.++|.+|++++++|+..+.+.+.. .| ..+++.+.|||+.|+-|++||+. . +.|+..
T Consensus 372 ~hDl~al~~sg~G~~yIvLPKmespeEV~~~~~lf~~~E~~lGlp~gTIKi~vLIET~ra~~nl~EI~~aa~~Rv~gLn~ 451 (731)
T 1p7t_A 372 LYDLKVQKNSRTGSVYIVKPKMHGPQEVAFANKLFTRIETMLGMAPNTLKMGIMDEERRTSLNLRSCIAQARNRVAFINT 451 (731)
T ss_dssp HHHHHHCSSCSSSCEEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEECSHHHHTTHHHHHHTTTTTEEEEEE
T ss_pred HhhHHHHhhCCCCCcEEEeCCCCCHHHHHHHHHHHHHHHHhhCCCCCceEEEEEECCHHHHHhHHHHHHhhccceEEEEc
Confidence 4566655543 4799999999999999999887742 23 25889999999999999999985 3 459999
Q ss_pred cCCCccCCC-CC---------------Cc-HHHHHHHHHH---HHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHH
Q 008112 346 ARGDLGAEL-PI---------------EE-VPLLQEEIIR---TCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAV 405 (577)
Q Consensus 346 aRGDLg~el-g~---------------e~-v~~~qk~Ii~---~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav 405 (577)
|+.|+..++ .. .. +....+..+. +|+++|++.|.- .|-..|.-...=..|.....
T Consensus 452 G~~Dyt~d~I~t~~~~~~~vR~~~t~~~~~~~AY~r~~V~~gLAcraaG~~aIgk-----Gm~a~p~dmeg~~~dk~~~~ 526 (731)
T 1p7t_A 452 GFLDRTGDEMHSVMEAGPMLRKNQMKSTPWIKAYERNNVLSGLFCGLRGKAQIGK-----GMWAMPDLMADMYSQKGDQL 526 (731)
T ss_dssp CHHHHHHHHHHHTGGGSCBCCGGGSTTCHHHHHHHHHHHHHHHHTTCTTTSEEEE-----CCCCCTTCHHHHHHHTHHHH
T ss_pred CHHHHhhhhhcccccCCcccccccccchHHHHHHHHHhhhhHHHHHHcCCCCccc-----ccccChhhHHHHHHHHHHHH
Confidence 999987774 21 11 2223355554 899999998751 12222222222335566688
Q ss_pred HhccceEEec
Q 008112 406 REGADAVMLS 415 (577)
Q Consensus 406 ~~G~D~imLs 415 (577)
.+|+|+-++-
T Consensus 527 ~~GfdGkwVi 536 (731)
T 1p7t_A 527 RAGANTAWVP 536 (731)
T ss_dssp HTTCSEEEES
T ss_pred hCCCCCcccC
Confidence 9999999983
No 31
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=97.18 E-value=0.0025 Score=74.25 Aligned_cols=136 Identities=18% Similarity=0.130 Sum_probs=102.4
Q ss_pred CCCCCCccCHHHHHHHH----hcCCC---EEEEcCCCCHHHHHHHHHHHH--------hcCC--CceEEEeecChhhHhh
Q 008112 270 TLPSITEKDWDDIKFGV----DNKVD---FYAVSFVKDAQVVHELKNYLK--------SCGA--DIHVIVKIESADSIPN 332 (577)
Q Consensus 270 ~lp~ltekD~~dI~~al----~~gvD---~I~~SfV~sa~dv~~lr~~l~--------~~~~--~i~IiaKIEt~~gv~N 332 (577)
..|.+.+-..+.|..|. +.|.+ .|++|||.+.++++.+++.+. +.|. ++++-.+||++.+.-.
T Consensus 698 ~~peif~~QlrAi~rAa~~~~~~G~~~~~~IMiPmV~t~~E~~~~~~~i~~~~~el~~e~g~~~~~~vG~MiEvPsaal~ 777 (913)
T 1h6z_A 698 TYPEIYNMQVRAIIEAAIAVSEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVT 777 (913)
T ss_dssp HSTTHHHHHHHHHHHHHHHHHTTTCCCCEEEEECCCCSHHHHHHHHHHHHHHHHHHHHHSCSCCCCEEEEEECSHHHHHT
T ss_pred CChHHHHHHHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecchHHHHH
Confidence 44555555556665542 23754 799999999999999998763 2232 5789999999999999
Q ss_pred HHHHHHhcCEEEEcCCCcc-----CCC-------------------CC-----CcHHHHHHHHHHHHHH--cCCceEEEe
Q 008112 333 LHSIITASDGAMVARGDLG-----AEL-------------------PI-----EEVPLLQEEIIRTCRS--MGKAVIVAT 381 (577)
Q Consensus 333 ldeIl~~sDGImIaRGDLg-----~el-------------------g~-----e~v~~~qk~Ii~~c~~--aGKPvi~AT 381 (577)
+|+|++.+|++-||--||. ++= |+ +-|..+.+.++++|++ +|+||.++-
T Consensus 778 ad~ia~~~DFfSiGTNDLTQ~tlg~dRd~~~~~l~~y~~~~i~~~dPf~~ld~paV~~lI~~ai~~a~~~~~g~~vgICG 857 (913)
T 1h6z_A 778 ADSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICG 857 (913)
T ss_dssp HHHHTTTCSEEEECTTHHHHHHHTCCGGGCHHHHTTTTTTCSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECS
T ss_pred HHHHHHhCCEEEEChHHHHHHHhccCCCchHHHHHHHHhccccccCcccccChHHHHHHHHHHHHHHHhcCCCCEEEEcC
Confidence 9999999999999987763 211 11 3567778889999997 699999998
Q ss_pred hhhHhhhcCCCCChHhHHHHHHHHHhccceEEecc
Q 008112 382 NMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG 416 (577)
Q Consensus 382 q~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ 416 (577)
++-- -|.- +.-++..|.|.+-+|.
T Consensus 858 E~~g------dP~~-----~~~l~~~Gid~vS~sp 881 (913)
T 1h6z_A 858 EHGG------DPAT-----IGFCHKVGLDYVSCSP 881 (913)
T ss_dssp GGGG------CHHH-----HHHHHHHTCSEEEECG
T ss_pred CCCC------CHHH-----HHHHHHcCCCEEEECc
Confidence 8651 2333 5568889999999983
No 32
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=96.21 E-value=0.032 Score=65.36 Aligned_cols=113 Identities=19% Similarity=0.148 Sum_probs=84.7
Q ss_pred EEEEcCCCCHHHHHHHHHHHH--------hcCC--CceEEEeecChhhHhhHHHHHHhcCEEEEcCCCc-----cCCCC-
Q 008112 292 FYAVSFVKDAQVVHELKNYLK--------SCGA--DIHVIVKIESADSIPNLHSIITASDGAMVARGDL-----GAELP- 355 (577)
Q Consensus 292 ~I~~SfV~sa~dv~~lr~~l~--------~~~~--~i~IiaKIEt~~gv~NldeIl~~sDGImIaRGDL-----g~elg- 355 (577)
.|++|||++.++++.+++.+. +.|. +++|-.+||+|.++-.+|+|++.+|++=||--|| |++=.
T Consensus 727 ~IMiPmV~~~~E~~~~~~~v~~~~~~~~~~~g~~~~~~vG~MiEvPsaal~ad~~a~~~DFfSiGTNDLTQ~tlg~DRd~ 806 (913)
T 2x0s_A 727 EIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVTADSIAQKADFFSFGTNDLTQMGCGFSRDD 806 (913)
T ss_dssp EEEETTCCSHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECSHHHHHTHHHHGGGCSEEEECTTHHHHHHHTCCGGG
T ss_pred EEEeeecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeHHHHHHHHHHHHHHCCEEEECHhHHHHHHHHHhcCC
Confidence 589999999999998887652 2233 5789999999999999999999999999998876 22211
Q ss_pred ------------------C-----CcHHHHHHHHHHHHHHcC--CceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccc
Q 008112 356 ------------------I-----EEVPLLQEEIIRTCRSMG--KAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGAD 410 (577)
Q Consensus 356 ------------------~-----e~v~~~qk~Ii~~c~~aG--KPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D 410 (577)
+ +-|..+.+..++++++++ +||.++-|+-- -|. -+.-.+..|.|
T Consensus 807 ~~~~~~~y~~~~~~~~dp~~~~~~~~v~~li~~a~~~gr~~~~~i~vgICGE~~g------dP~-----~~~~L~~~Gid 875 (913)
T 2x0s_A 807 AGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICGEHGG------DPA-----TIGFCHKVGLD 875 (913)
T ss_dssp CHHHHHHHHHHTSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECSGGGG------CHH-----HHHHHHHHTCS
T ss_pred chhhhhhhhhccccccCCCchhHHHHHHHHHHHHHHHhhhcCCCCeEEEeCCccc------CHH-----HHHHHHHcCCC
Confidence 1 134555566666676665 68999988541 232 24578899999
Q ss_pred eEEec
Q 008112 411 AVMLS 415 (577)
Q Consensus 411 ~imLs 415 (577)
.+-+|
T Consensus 876 ~~S~s 880 (913)
T 2x0s_A 876 YVSCS 880 (913)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99998
No 33
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=95.24 E-value=0.23 Score=54.77 Aligned_cols=125 Identities=19% Similarity=0.218 Sum_probs=84.5
Q ss_pred CccCHHHHHHHHhcCCCEEEE--cCCCCHHHHHHHHHHHHhcCCCceEEE-eecChhhHhhHHHHHHhcCEEEEcCCCcc
Q 008112 275 TEKDWDDIKFGVDNKVDFYAV--SFVKDAQVVHELKNYLKSCGADIHVIV-KIESADSIPNLHSIITASDGAMVARGDLG 351 (577)
Q Consensus 275 tekD~~dI~~al~~gvD~I~~--SfV~sa~dv~~lr~~l~~~~~~i~Iia-KIEt~~gv~NldeIl~~sDGImIaRGDLg 351 (577)
++.+.+-+...++.|+|+|++ +.-.+.. +.+..+++++...++.||+ -+-|.++.++|-+ +=+|+|-||-|-=+
T Consensus 279 ~~d~~eR~~aLv~AGvD~iviD~ahGhs~~-v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~--aGAD~vkVGiGpGS 355 (556)
T 4af0_A 279 RPGDKDRLKLLAEAGLDVVVLDSSQGNSVY-QIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIA--AGADGLRIGMGSGS 355 (556)
T ss_dssp SHHHHHHHHHHHHTTCCEEEECCSCCCSHH-HHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHH--HTCSEEEECSSCST
T ss_pred CccHHHHHHHHHhcCCcEEEEeccccccHH-HHHHHHHHHhhCCcceEEeccccCHHHHHHHHH--cCCCEEeecCCCCc
Confidence 344566677778999999876 3333333 4444556666667888888 8999998776633 34999999866422
Q ss_pred CCC-------CCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 352 AEL-------PIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 352 ~el-------g~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
+-. |.. -..+..+..+.|+..|+|+|---. .- --.|++.|+..|+|++||.
T Consensus 356 iCtTr~v~GvG~P-Q~tAi~~~a~~a~~~~vpvIADGG---------I~---~sGDi~KAlaaGAd~VMlG 413 (556)
T 4af0_A 356 ICITQEVMAVGRP-QGTAVYAVAEFASRFGIPCIADGG---------IG---NIGHIAKALALGASAVMMG 413 (556)
T ss_dssp TBCCTTTCCSCCC-HHHHHHHHHHHHGGGTCCEEEESC---------CC---SHHHHHHHHHTTCSEEEES
T ss_pred ccccccccCCCCc-HHHHHHHHHHHHHHcCCCEEecCC---------cC---cchHHHHHhhcCCCEEEEc
Confidence 211 211 233445667788899999885332 21 2378999999999999984
No 34
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=94.59 E-value=0.18 Score=53.66 Aligned_cols=119 Identities=23% Similarity=0.336 Sum_probs=73.4
Q ss_pred HHHHHHHHhcCCCEEEE--cCCCCHHHHHHHHHHHHhcCCCceEEE-eecChhhHhhHHHHHHh-cCEEEEcCC--CccC
Q 008112 279 WDDIKFGVDNKVDFYAV--SFVKDAQVVHELKNYLKSCGADIHVIV-KIESADSIPNLHSIITA-SDGAMVARG--DLGA 352 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~--SfV~sa~dv~~lr~~l~~~~~~i~Iia-KIEt~~gv~NldeIl~~-sDGImIaRG--DLg~ 352 (577)
.+.++..++.|+|+|.+ ++-.+....+.++. +.+. .+++|++ .+=|.+. ...+.+. +|+|.++-| ..+.
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~-ik~~-~~i~Vi~g~V~t~e~---A~~a~~aGAD~I~vG~g~Gs~~~ 220 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKE-IKSK-MNIDVIVGNVVTEEA---TKELIENGADGIKVGIGPGSICT 220 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHH-HHTT-CCCEEEEEEECSHHH---HHHHHHTTCSEEEECC-------
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHH-HHhc-CCCeEEEeecCCHHH---HHHHHHcCCCEEEEeCCCCcCcc
Confidence 57788889999999987 66555433333433 3332 1577886 5655444 4444445 999999632 2111
Q ss_pred C-----CCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 353 E-----LPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 353 e-----lg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
. .+.. -..+-.++.+.+++.++|+|-+-.+. ...|++.++..|+|++|+.
T Consensus 221 tr~~~g~g~p-~~~al~~v~~~~~~~~IPVIA~GGI~------------~~~di~kalalGAd~V~vG 275 (400)
T 3ffs_A 221 TRIVAGVGVP-QITAIEKCSSVASKFGIPIIADGGIR------------YSGDIGKALAVGASSVMIG 275 (400)
T ss_dssp --CCSCBCCC-HHHHHHHHHHHHTTTTCCEEEESCCC------------SHHHHHHHHTTTCSEEEEC
T ss_pred cccccccchh-HHHHHHHHHHHHHhcCCCEEecCCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 0 1111 22344566666667799998765543 2367999999999999984
No 35
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=94.44 E-value=0.23 Score=47.15 Aligned_cols=138 Identities=17% Similarity=0.173 Sum_probs=86.7
Q ss_pred HHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecCh-hhHhhHHHHHHh-cCEEEEcCCCccCCCCCCc
Q 008112 281 DIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESA-DSIPNLHSIITA-SDGAMVARGDLGAELPIEE 358 (577)
Q Consensus 281 dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~-~gv~NldeIl~~-sDGImIaRGDLg~elg~e~ 358 (577)
.++.+.+.|+|+|.++-....+++.++.+.+++.|. .++.-+-++ +-.+.+..+.+. +|.|.+.+|-=|...+...
T Consensus 69 ~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~--~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g~~g~~~~~~~ 146 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGK--QVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQAAGRKP 146 (211)
T ss_dssp HHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTC--EEEEECTTCSSHHHHHHHHHHHTCCEEEEECCHHHHHTTCCS
T ss_pred HHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCC--eEEEEecCCCCHHHHHHHHHHcCCCEEEEcCCCcccccCCCC
Confidence 378889999999999876666788888888877654 344322122 224556777777 9998887652222222222
Q ss_pred HHHHHHHHHHHHHHc-CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHH
Q 008112 359 VPLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLR 437 (577)
Q Consensus 359 v~~~qk~Ii~~c~~a-GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~ 437 (577)
+. .-+++ .+.. +.|+++.-.+ + ..++..+...|+|++....--..+..|.++++.+.+..+.
T Consensus 147 ~~-~i~~l---~~~~~~~~i~~~gGI----------~---~~~~~~~~~~Gad~vvvGsai~~~~d~~~~~~~l~~~~~~ 209 (211)
T 3f4w_A 147 ID-DLITM---LKVRRKARIAVAGGI----------S---SQTVKDYALLGPDVVIVGSAITHAADPAGEARKISQVLLQ 209 (211)
T ss_dssp HH-HHHHH---HHHCSSCEEEEESSC----------C---TTTHHHHHTTCCSEEEECHHHHTCSSHHHHHHHHHHHHHH
T ss_pred HH-HHHHH---HHHcCCCcEEEECCC----------C---HHHHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHHHHhh
Confidence 21 11222 2222 6777654321 1 1357778889999999875444567899999888776543
No 36
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens}
Probab=93.97 E-value=0.074 Score=58.40 Aligned_cols=107 Identities=12% Similarity=0.158 Sum_probs=81.6
Q ss_pred cCCCEEEEcCCCCHHHHHHHHHHHHh--------cC-----CCceEEEeecChhhHhhHHHHHHh--c-----------C
Q 008112 288 NKVDFYAVSFVKDAQVVHELKNYLKS--------CG-----ADIHVIVKIESADSIPNLHSIITA--S-----------D 341 (577)
Q Consensus 288 ~gvD~I~~SfV~sa~dv~~lr~~l~~--------~~-----~~i~IiaKIEt~~gv~NldeIl~~--s-----------D 341 (577)
..+..+++||.++++|+.++..++++ .| ..+.||..+||.+.+.|.++|+.. . -
T Consensus 138 ~aI~~yIISMT~sasDlL~V~~L~k~~aGL~~~e~g~~~~~~~i~VVPLFETieDL~~a~~Il~~ll~~~r~l~~~~~~Q 217 (560)
T 3odm_A 138 PAISEVVVPMIETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSVRIIPLVEDVPALANIDRILDEHYEIEKSKGHILKDL 217 (560)
T ss_dssp CSCCEEEESSCCSHHHHHHHHHHHHHHHHHHHHHCSSCCCTTSSEEEEEECCHHHHHTTHHHHHHHHHHHHHTTCCCSEE
T ss_pred cccCeEEecCCCCHHHHHHHHHHHHHHhcccccccCCCCCCCCCCeECCcCCHHHHHhhHHHHHHHHHHHHHhcccCCeE
Confidence 34567899999999999999877732 12 257899999999999999999985 2 2
Q ss_pred EEEEcCCCccCCCCCC----cHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCC
Q 008112 342 GAMVARGDLGAELPIE----EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPT 394 (577)
Q Consensus 342 GImIaRGDLg~elg~e----~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~Pt 394 (577)
-||+|+-|=+.+-|+- .+..+|.++.+.|+++|+++...=..=-+.-....|+
T Consensus 218 eVMLGYSDSaKDgG~laS~waly~Aq~~L~~~~~e~gI~l~lFHGRGGtvgRGGgp~ 274 (560)
T 3odm_A 218 RIMIARSDTAMSYGLISGVLSVLMAVDGAYKWGEKHGVTISPILGCGSLPFRGHFSE 274 (560)
T ss_dssp EEEEESHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEECCSSGGGTCCCT
T ss_pred EEEEeeccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeeCCCCCcCCCCCH
Confidence 7999998877777754 6888999999999999999765433223333444454
No 37
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=93.84 E-value=0.44 Score=52.17 Aligned_cols=123 Identities=19% Similarity=0.200 Sum_probs=77.0
Q ss_pred cCHHHHHHHHhcCCCEEEEcCCC-CHHHHHHHHHHHHhcCCCceEEE-eecChhhHhhHHHHHHh-cCEEEEcCCCccC-
Q 008112 277 KDWDDIKFGVDNKVDFYAVSFVK-DAQVVHELKNYLKSCGADIHVIV-KIESADSIPNLHSIITA-SDGAMVARGDLGA- 352 (577)
Q Consensus 277 kD~~dI~~al~~gvD~I~~SfV~-sa~dv~~lr~~l~~~~~~i~Iia-KIEt~~gv~NldeIl~~-sDGImIaRGDLg~- 352 (577)
.+.+.+...++.|+|.|.+.... ..+.+.++.+.+.+.-.++.+++ .+-|.+... ...+. +|+|.+|-|-=+.
T Consensus 256 d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~---~~~~aGad~i~vg~g~gsi~ 332 (511)
T 3usb_A 256 DAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATK---ALIEAGANVVKVGIGPGSIC 332 (511)
T ss_dssp THHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHH---HHHHHTCSEEEECSSCSTTC
T ss_pred chHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeeccHHHHH---HHHHhCCCEEEECCCCcccc
Confidence 44677788899999999885432 22333333333444334566666 566655533 33334 9999986443111
Q ss_pred ------CCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 353 ------ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 353 ------elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
..+.. -..+-.++.+.|++.++|+|.+..+- -..|++.|+..|+|++|+.
T Consensus 333 ~~~~~~g~g~p-~~~~l~~v~~~~~~~~iPVIa~GGI~------------~~~di~kala~GA~~V~vG 388 (511)
T 3usb_A 333 TTRVVAGVGVP-QLTAVYDCATEARKHGIPVIADGGIK------------YSGDMVKALAAGAHVVMLG 388 (511)
T ss_dssp CHHHHHCCCCC-HHHHHHHHHHHHHTTTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred ccccccCCCCC-cHHHHHHHHHHHHhCCCcEEEeCCCC------------CHHHHHHHHHhCchhheec
Confidence 11111 23344567778888899999765533 2467999999999999985
No 38
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3
Probab=93.55 E-value=0.14 Score=60.03 Aligned_cols=113 Identities=15% Similarity=0.167 Sum_probs=93.5
Q ss_pred HHHHhcCC---CEEEEcCCCCHHHHHHHHHHHHhcCC--CceEEEeecChhhHhhHHHHHHh---c----------CEEE
Q 008112 283 KFGVDNKV---DFYAVSFVKDAQVVHELKNYLKSCGA--DIHVIVKIESADSIPNLHSIITA---S----------DGAM 344 (577)
Q Consensus 283 ~~al~~gv---D~I~~SfV~sa~dv~~lr~~l~~~~~--~i~IiaKIEt~~gv~NldeIl~~---s----------DGIm 344 (577)
+.+.+.|. ..+++|+.++++||.++--+.++.|- .+.|+...||.+.++|.++|+.. . --||
T Consensus 519 ~~i~~~g~~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VVPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~QeVM 598 (970)
T 1jqo_A 519 HVLAELPPDSFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERLADLQSAPASVERLFSVDWYMDRIKGKQQVM 598 (970)
T ss_dssp HHHHHSCSTTEEEEEETTCCSTHHHHHHHHHHHHTCCSSCCCEEEEECSHHHHHTHHHHHHHHHTCHHHHHHHTSEEEEE
T ss_pred HHHHHhChhhhCeEEeCCCCCHHHHHHHHHHHHHcCCCCCCCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEE
Confidence 44445554 46789999999999999999988874 58899999999999999999985 1 1699
Q ss_pred EcCCCccCCCCCC----cHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCCh
Q 008112 345 VARGDLGAELPIE----EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTR 395 (577)
Q Consensus 345 IaRGDLg~elg~e----~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~Ptr 395 (577)
+|.-|=+.+-|+- .+..+|+++.+.|+++|+++.+.=..=.|.-....|+.
T Consensus 599 LGYSDS~KD~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFHGRGGsvgRGGgp~~ 653 (970)
T 1jqo_A 599 VGYSDSGKDAGRLSAAWQLYRAQEEMAQVAKRYGVKLTLFHGRGGTVGRGGGPTH 653 (970)
T ss_dssp EESTTHHHHSCHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCSSGGGTCCCHH
T ss_pred EecccccccccHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCCCCCCCCChH
Confidence 9999988888865 68899999999999999999876655666666667776
No 39
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=93.52 E-value=0.47 Score=51.72 Aligned_cols=123 Identities=17% Similarity=0.225 Sum_probs=78.0
Q ss_pred ccCHHHHHHHHhcCCCEEEEcCC--CCHHHHHHHHHHHHhcCCCceEEE-eecChhhHhhHHHHHHh-cCEEEEcCCCcc
Q 008112 276 EKDWDDIKFGVDNKVDFYAVSFV--KDAQVVHELKNYLKSCGADIHVIV-KIESADSIPNLHSIITA-SDGAMVARGDLG 351 (577)
Q Consensus 276 ekD~~dI~~al~~gvD~I~~SfV--~sa~dv~~lr~~l~~~~~~i~Iia-KIEt~~gv~NldeIl~~-sDGImIaRGDLg 351 (577)
+.+.+.++..++.|+|+|.+-.. .+...++.+++ +.+.-.++.|++ .+-|.+..+ .+.+. +|+|.++-|.=+
T Consensus 230 ~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~-ir~~~p~~~Vi~g~v~t~e~a~---~l~~aGaD~I~Vg~g~Gs 305 (496)
T 4fxs_A 230 PGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRE-TRAAYPHLEIIGGNVATAEGAR---ALIEAGVSAVKVGIGPGS 305 (496)
T ss_dssp SCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHH-HHHHCTTCCEEEEEECSHHHHH---HHHHHTCSEEEECSSCCT
T ss_pred cchHHHHHHHHhccCceEEeccccccchHHHHHHHH-HHHHCCCceEEEcccCcHHHHH---HHHHhCCCEEEECCCCCc
Confidence 46688888889999999987543 23322333333 333334566766 477766543 33444 999998644322
Q ss_pred CC-------CCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 352 AE-------LPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 352 ~e-------lg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
.. .+. .-..+-.++.+.|++.++|+|.+..+- -..|++.++..|+|++|+.
T Consensus 306 ~~~tr~~~g~g~-p~~~~i~~v~~~~~~~~iPVIa~GGI~------------~~~di~kala~GAd~V~iG 363 (496)
T 4fxs_A 306 ICTTRIVTGVGV-PQITAIADAAGVANEYGIPVIADGGIR------------FSGDISKAIAAGASCVMVG 363 (496)
T ss_dssp TBCHHHHHCCCC-CHHHHHHHHHHHHGGGTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred CcccccccCCCc-cHHHHHHHHHHHhccCCCeEEEeCCCC------------CHHHHHHHHHcCCCeEEec
Confidence 11 111 133444677778888899999765433 2367889999999999984
No 40
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=93.41 E-value=1.8 Score=45.50 Aligned_cols=123 Identities=19% Similarity=0.269 Sum_probs=77.6
Q ss_pred ccCHHHHHHHHhcCCCEEEE--cCCCCHHHHHHHHHHHHhcCCCceEEE-eecChhhHhhHHHHHHh-cCEEEEc--CCC
Q 008112 276 EKDWDDIKFGVDNKVDFYAV--SFVKDAQVVHELKNYLKSCGADIHVIV-KIESADSIPNLHSIITA-SDGAMVA--RGD 349 (577)
Q Consensus 276 ekD~~dI~~al~~gvD~I~~--SfV~sa~dv~~lr~~l~~~~~~i~Iia-KIEt~~gv~NldeIl~~-sDGImIa--RGD 349 (577)
+.+.+.++.+++.|+|+|.+ ++-.+...++.++. +.+...++.+++ .+-|.+....+ .+. +|+|.+| +|-
T Consensus 107 ~~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~-ik~~~p~v~Vi~G~v~t~e~A~~a---~~aGAD~I~vG~gpGs 182 (366)
T 4fo4_A 107 PGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRE-TRAAYPHLEIIGGNVATAEGARAL---IEAGVSAVKVGIGPGS 182 (366)
T ss_dssp TTCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHH-HHHHCTTCEEEEEEECSHHHHHHH---HHHTCSEEEECSSCST
T ss_pred hhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHH-HHHhcCCCceEeeeeCCHHHHHHH---HHcCCCEEEEecCCCC
Confidence 35678888899999999987 55555544444444 333334677766 47776655443 334 9999995 221
Q ss_pred ccC-----CCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 350 LGA-----ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 350 Lg~-----elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
-.. ..+... ..+-.++.+.|+..++|+|-+-.+- .-.|++.++..|+|++|+.
T Consensus 183 ~~~tr~~~g~g~p~-~~~l~~v~~~~~~~~iPVIA~GGI~------------~~~di~kala~GAd~V~vG 240 (366)
T 4fo4_A 183 ICTTRIVTGVGVPQ-ITAIADAAGVANEYGIPVIADGGIR------------FSGDISKAIAAGASCVMVG 240 (366)
T ss_dssp TBCHHHHHCCCCCH-HHHHHHHHHHHGGGTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred CCCcccccCcccch-HHHHHHHHHHHhhcCCeEEEeCCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 100 012222 2334456666777899998754432 2357889999999999985
No 41
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=92.87 E-value=1.5 Score=45.95 Aligned_cols=119 Identities=21% Similarity=0.320 Sum_probs=72.8
Q ss_pred HHHHHHHHhcCCCEEEE--cCCCCHHHHHHHHHHHHhcCCCceEEE-eecChhhHhhHHHHHHh-cCEEEEc--CCCccC
Q 008112 279 WDDIKFGVDNKVDFYAV--SFVKDAQVVHELKNYLKSCGADIHVIV-KIESADSIPNLHSIITA-SDGAMVA--RGDLGA 352 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~--SfV~sa~dv~~lr~~l~~~~~~i~Iia-KIEt~~gv~NldeIl~~-sDGImIa--RGDLg~ 352 (577)
.+.++.+++.|+|+|.+ ++-.+...++.+++.-+.. ++.+++ .+-|.+.. ....+. +|+|.++ +|....
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~--~~~Vivg~v~t~e~A---~~l~~aGaD~I~VG~~~Gs~~~ 181 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM--NIDVIVGNVVTEEAT---KELIENGADGIKVGIGPGSICT 181 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHC--CCEEEEEEECSHHHH---HHHHHTTCSEEEECSSCCTTCC
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhc--CCcEEEccCCCHHHH---HHHHHcCcCEEEEecCCCcCCC
Confidence 67788889999999987 4433333333333332222 577776 67666554 344444 9999996 332110
Q ss_pred -----CCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 353 -----ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 353 -----elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
..+.. -...-.++.+.++..++|+|.+-.+- + ..|++.++..|+|++|+.
T Consensus 182 tr~~~g~g~p-~~~~i~~v~~~~~~~~iPVIA~GGI~---------~---~~di~kala~GAd~V~vG 236 (361)
T 3khj_A 182 TRIVAGVGVP-QITAIEKCSSVASKFGIPIIADGGIR---------Y---SGDIGKALAVGASSVMIG 236 (361)
T ss_dssp HHHHTCBCCC-HHHHHHHHHHHHHHHTCCEEEESCCC---------S---HHHHHHHHHHTCSEEEES
T ss_pred cccccCCCCC-cHHHHHHHHHHHhhcCCeEEEECCCC---------C---HHHHHHHHHcCCCEEEEC
Confidence 01111 22344556666777799998754432 2 257889999999999985
No 42
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=92.58 E-value=0.71 Score=45.22 Aligned_cols=140 Identities=12% Similarity=0.140 Sum_probs=86.2
Q ss_pred HHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEcCCCccCCCCCC--
Q 008112 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIE-- 357 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIaRGDLg~elg~e-- 357 (577)
..++.+.+.|+|+|.+.. +..+++.+..+.+++.|....+...-.| .++.+++++...|.|++- +++-|+.
T Consensus 78 ~~i~~~~~aGad~itvH~-Ea~~~~~~~i~~i~~~G~k~gval~p~t--~~e~l~~~l~~~D~Vl~m----sv~pGf~Gq 150 (228)
T 3ovp_A 78 QWVKPMAVAGANQYTFHL-EATENPGALIKDIRENGMKVGLAIKPGT--SVEYLAPWANQIDMALVM----TVEPGFGGQ 150 (228)
T ss_dssp GGHHHHHHHTCSEEEEEG-GGCSCHHHHHHHHHHTTCEEEEEECTTS--CGGGTGGGGGGCSEEEEE----SSCTTTCSC
T ss_pred HHHHHHHHcCCCEEEEcc-CCchhHHHHHHHHHHcCCCEEEEEcCCC--CHHHHHHHhccCCeEEEe----eecCCCCCc
Confidence 346677889999999975 5445677777777777776655544444 468888999889998872 3333222
Q ss_pred -cHHHHHHHHHHHHHHc-CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHH
Q 008112 358 -EVPLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVS 435 (577)
Q Consensus 358 -~v~~~qk~Ii~~c~~a-GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~ 435 (577)
-.+...++|-+..+.. +.|+.+.-. + .|. .+..++..|+|.+....--...+-|.++++.+++.+
T Consensus 151 ~f~~~~l~ki~~lr~~~~~~~I~VdGG-I-------~~~-----t~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~~~ 217 (228)
T 3ovp_A 151 KFMEDMMPKVHWLRTQFPSLDIEVDGG-V-------GPD-----TVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVC 217 (228)
T ss_dssp CCCGGGHHHHHHHHHHCTTCEEEEESS-C-------STT-----THHHHHHHTCCEEEESHHHHTCSCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHhcCCCCEEEeCC-c-------CHH-----HHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHH
Confidence 1122222222222222 345544332 2 232 366788999999998633223457999999888766
Q ss_pred HHHh
Q 008112 436 LRTE 439 (577)
Q Consensus 436 ~~aE 439 (577)
.++-
T Consensus 218 ~~~~ 221 (228)
T 3ovp_A 218 SEAA 221 (228)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 43
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=92.44 E-value=0.85 Score=49.60 Aligned_cols=123 Identities=20% Similarity=0.228 Sum_probs=76.3
Q ss_pred ccCHHHHHHHHhcCCCEEEEc--CCCCHHHHHHHHHHHHhcCCCceEEEe-ecChhhHhhHHHHHHh-cCEEEEcCCCcc
Q 008112 276 EKDWDDIKFGVDNKVDFYAVS--FVKDAQVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITA-SDGAMVARGDLG 351 (577)
Q Consensus 276 ekD~~dI~~al~~gvD~I~~S--fV~sa~dv~~lr~~l~~~~~~i~IiaK-IEt~~gv~NldeIl~~-sDGImIaRGDLg 351 (577)
+.+.+.++..++.|+|+|.+- .-.+....+.+ +.+.+.-.++.|++. +-|.+.. ....+. +|+|.+|-|.=+
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v-~~i~~~~p~~~Vi~g~v~t~e~a---~~l~~aGaD~I~vg~g~Gs 303 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTAHGHSKGVIERV-RWVKQTFPDVQVIGGNIATAEAA---KALAEAGADAVKVGIGPGS 303 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHH-HHHHHHCTTSEEEEEEECSHHHH---HHHHHTTCSEEEECSSCST
T ss_pred cchHHHHHHHhhcccceEEecccCCcchhHHHHH-HHHHHHCCCceEEEeeeCcHHHH---HHHHHcCCCEEEECCCCCc
Confidence 345777888889999999863 33343223333 333333346777775 6666554 334444 999999643311
Q ss_pred C-------CCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 352 A-------ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 352 ~-------elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
. ..+.. -..+-.++.+.|++.++|+|.+..+- + ..|++.++..|+|++|+.
T Consensus 304 ~~~t~~~~g~g~p-~~~~l~~v~~~~~~~~iPVIa~GGI~---------~---~~di~kal~~GAd~V~vG 361 (490)
T 4avf_A 304 ICTTRIVAGVGVP-QISAIANVAAALEGTGVPLIADGGIR---------F---SGDLAKAMVAGAYCVMMG 361 (490)
T ss_dssp TCHHHHHTCBCCC-HHHHHHHHHHHHTTTTCCEEEESCCC---------S---HHHHHHHHHHTCSEEEEC
T ss_pred CCCccccCCCCcc-HHHHHHHHHHHhccCCCcEEEeCCCC---------C---HHHHHHHHHcCCCeeeec
Confidence 1 11222 23344566777777899999765543 2 367889999999999995
No 44
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A
Probab=92.43 E-value=0.15 Score=59.36 Aligned_cols=153 Identities=18% Similarity=0.197 Sum_probs=106.2
Q ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhcCC--CceEEEeecChhhHhhHHHHHHh---c----------CEEEEcCCCccCC
Q 008112 289 KVDFYAVSFVKDAQVVHELKNYLKSCGA--DIHVIVKIESADSIPNLHSIITA---S----------DGAMVARGDLGAE 353 (577)
Q Consensus 289 gvD~I~~SfV~sa~dv~~lr~~l~~~~~--~i~IiaKIEt~~gv~NldeIl~~---s----------DGImIaRGDLg~e 353 (577)
.+..+++|+.++++||.++--+.++.|. .+.|+...||.+.++|.++|++. . --||+|.-|=+.+
T Consensus 468 a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~qeVMlGYSDS~KD 547 (883)
T 1jqn_A 468 SIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAKD 547 (883)
T ss_dssp SEEEEEEETCCSHHHHHHHHHHHHTTTCCSCCCEEEEECSHHHHHHHHHHHHHHHHSHHHHHHTTTEEEEEECHHHHHHH
T ss_pred hcCeEEeCCCCCHHHHHHHHHHHHHhCCCCCcCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEEEeecccccc
Confidence 4567889999999999999999888875 58899999999999999999985 1 2699998887777
Q ss_pred CCCC----cHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCC--CCHHHH
Q 008112 354 LPIE----EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHG--KFPLKA 427 (577)
Q Consensus 354 lg~e----~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G--~yP~ea 427 (577)
-|+- .+..+|+++.+.|+++|+++.+.=..=.|+-....|+..-+..-..-..+|.=-+---||+-.- .+|..|
T Consensus 548 ~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFhGRGGsvgRGGgp~~~ailaqp~gsv~g~~r~TeQGEvI~~kY~~p~~a 627 (883)
T 1jqn_A 548 AGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKYGLPEIT 627 (883)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECSSTGGGSCHHHHHHHHHTSCTTTTTTCEEEEECGGGHHHHHSSHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCchHHHHHhCCCCCcCCceEEEecchHHHHhcCChHHH
Confidence 7754 6888999999999999999877555444544444554311100000111122223333443222 458888
Q ss_pred HHHHHHHHHHHhcc
Q 008112 428 VKVMHTVSLRTEAT 441 (577)
Q Consensus 428 V~~m~~I~~~aE~~ 441 (577)
++.|..+...+-..
T Consensus 628 ~~nLe~~~~A~l~~ 641 (883)
T 1jqn_A 628 VSSLSLYTGAILEA 641 (883)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 88777766665543
No 45
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=92.05 E-value=1.3 Score=42.82 Aligned_cols=138 Identities=12% Similarity=0.174 Sum_probs=82.0
Q ss_pred HHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHH---hcCEEEEcCCCc---cCC
Q 008112 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT---ASDGAMVARGDL---GAE 353 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~---~sDGImIaRGDL---g~e 353 (577)
+.++.+.+.|+|+|.+..-.+.+.+.++.+.+.+.| ..++.-+....-++.+.+++. .+|.+.+..-.- |-.
T Consensus 78 ~~i~~~~~agad~v~vH~~~~~~~~~~~~~~i~~~g--~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~ 155 (228)
T 1h1y_A 78 DYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKG--MRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQK 155 (228)
T ss_dssp GGHHHHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTT--CEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCC
T ss_pred HHHHHHHHcCCCEEEECCCCcccHHHHHHHHHHHcC--CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCccc
Confidence 457777889999998887666554234444444444 445556643334667888888 799998853221 222
Q ss_pred CCCCcHHHHHHHHHHHHHHc-CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHH
Q 008112 354 LPIEEVPLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 432 (577)
Q Consensus 354 lg~e~v~~~qk~Ii~~c~~a-GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~ 432 (577)
.+...+ +++-+..+.. +.|+.++-.+ .|. .+..++..|+|++...+---..+-|.++++.|+
T Consensus 156 ~~~~~l----~~i~~~~~~~~~~pi~v~GGI--------~~~-----ni~~~~~aGaD~vvvGsai~~~~d~~~~~~~l~ 218 (228)
T 1h1y_A 156 FMPEMM----EKVRALRKKYPSLDIEVDGGL--------GPS-----TIDVAASAGANCIVAGSSIFGAAEPGEVISALR 218 (228)
T ss_dssp CCGGGH----HHHHHHHHHCTTSEEEEESSC--------STT-----THHHHHHHTCCEEEESHHHHTSSCHHHHHHHHH
T ss_pred CCHHHH----HHHHHHHHhcCCCCEEEECCc--------CHH-----HHHHHHHcCCCEEEECHHHHCCCCHHHHHHHHH
Confidence 222222 2222222233 7888765432 222 244555669999998644333446999999988
Q ss_pred HHHH
Q 008112 433 TVSL 436 (577)
Q Consensus 433 ~I~~ 436 (577)
+.++
T Consensus 219 ~~~~ 222 (228)
T 1h1y_A 219 KSVE 222 (228)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 46
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=92.04 E-value=2.3 Score=41.67 Aligned_cols=136 Identities=16% Similarity=0.083 Sum_probs=82.7
Q ss_pred CHHHHHHHHhcCCCEEEEcC--CCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCCCccCC-
Q 008112 278 DWDDIKFGVDNKVDFYAVSF--VKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAE- 353 (577)
Q Consensus 278 D~~dI~~al~~gvD~I~~Sf--V~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGDLg~e- 353 (577)
+.+++..+++.|+|+|.+-- ..+++.+.++.+.+++. .+.+++.+-|.+ .+....+. +|.|.+.-..+...
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t~e---ea~~a~~~Gad~Ig~~~~g~t~~~ 164 (232)
T 3igs_A 90 FLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHH--HLLTMADCSSVD---DGLACQRLGADIIGTTMSGYTTPD 164 (232)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEEECCSHH---HHHHHHHTTCSEEECTTTTSSSSS
T ss_pred cHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHC--CCEEEEeCCCHH---HHHHHHhCCCCEEEEcCccCCCCC
Confidence 45678888999999987643 34667788887777664 566777665543 23333333 88886532112111
Q ss_pred -CCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHH
Q 008112 354 -LPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 432 (577)
Q Consensus 354 -lg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~ 432 (577)
.....+..+ ++ .++.++|+|.... .-|. .|+..+...|+|++++. |++.+ |.+..+.+.
T Consensus 165 ~~~~~~~~~i-~~----l~~~~ipvIA~GG---------I~t~---~d~~~~~~~GadgV~VG--sal~~-p~~~~~~~~ 224 (232)
T 3igs_A 165 TPEEPDLPLV-KA----LHDAGCRVIAEGR---------YNSP---ALAAEAIRYGAWAVTVG--SAITR-LEHICGWYN 224 (232)
T ss_dssp CCSSCCHHHH-HH----HHHTTCCEEEESC---------CCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHHHH
T ss_pred CCCCCCHHHH-HH----HHhcCCcEEEECC---------CCCH---HHHHHHHHcCCCEEEEe--hHhcC-HHHHHHHHH
Confidence 111233222 22 2233899886543 2233 45777788899999995 66665 888888877
Q ss_pred HHHHHH
Q 008112 433 TVSLRT 438 (577)
Q Consensus 433 ~I~~~a 438 (577)
...+++
T Consensus 225 ~~i~~~ 230 (232)
T 3igs_A 225 DALKKA 230 (232)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 766543
No 47
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=91.83 E-value=0.9 Score=43.86 Aligned_cols=45 Identities=24% Similarity=0.243 Sum_probs=38.5
Q ss_pred hHHHHHHHHHHHhhcCc-eEEEEcCChHHHHHHHhhCCCCeEEEEcC
Q 008112 460 SEMFAYHATMMSNTLGT-SIVVFTRTGFMAILLSHYRPSGTIFAFTN 505 (577)
Q Consensus 460 ~~~ia~~a~~~a~~~~a-aIiV~T~sG~tA~~is~~RP~~PIIAvT~ 505 (577)
++.....|++-|.+++. .|||.|.+|.||..+...-.. .|++||+
T Consensus 36 T~~tl~la~era~e~~Ik~iVVASssG~TA~k~~e~~~~-~lVvVTh 81 (206)
T 1t57_A 36 TERVLELVGERADQLGIRNFVVASVSGETALRLSEMVEG-NIVSVTH 81 (206)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTCCS-EEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHccC-CEEEEeC
Confidence 45666678888899998 999999999999999997655 9999994
No 48
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=91.83 E-value=1.1 Score=44.18 Aligned_cols=42 Identities=7% Similarity=0.086 Sum_probs=34.3
Q ss_pred HHHHHHHHHhCCcEE--EEeccCCChHHHHHHHHHHHHHHHhcC
Q 008112 123 REMIWKLAEAGMNVA--RLNMSHGDHASHQKVIDLVKEYNAQSK 164 (577)
Q Consensus 123 ~e~l~~li~~Gm~v~--RiN~sHg~~e~~~~~i~~ir~~~~~~~ 164 (577)
.+.+++.+++|++.. .+|....+.++..+.++.+.++.++++
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g 145 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWG 145 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcC
Confidence 567899999999999 899888877777777777777766666
No 49
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=91.72 E-value=0.81 Score=45.53 Aligned_cols=141 Identities=13% Similarity=0.077 Sum_probs=86.9
Q ss_pred HHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEcCCC--ccCCCCCC
Q 008112 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGD--LGAELPIE 357 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIaRGD--Lg~elg~e 357 (577)
..++.+.+.|+|+|.+.. +..+++.+..+.+++.|.+..+...=.| -++.+++++...|.|++-.-+ +|-.-=.+
T Consensus 100 ~~i~~~~~aGAd~itvH~-Ea~~~~~~~i~~ir~~G~k~Gvalnp~T--p~e~l~~~l~~vD~VlvMsV~PGfgGQ~fi~ 176 (246)
T 3inp_A 100 ALIESFAKAGATSIVFHP-EASEHIDRSLQLIKSFGIQAGLALNPAT--GIDCLKYVESNIDRVLIMSVNPGFGGQKFIP 176 (246)
T ss_dssp HHHHHHHHHTCSEEEECG-GGCSCHHHHHHHHHTTTSEEEEEECTTC--CSGGGTTTGGGCSEEEEECSCTTC--CCCCT
T ss_pred HHHHHHHHcCCCEEEEcc-ccchhHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHhcCCEEEEeeecCCCCCcccch
Confidence 457777899999999875 3345777777888877776666544455 557888999899988873211 22211112
Q ss_pred cHHHHHHHHHHHHHHcC--CceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHH
Q 008112 358 EVPLLQEEIIRTCRSMG--KAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVS 435 (577)
Q Consensus 358 ~v~~~qk~Ii~~c~~aG--KPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~ 435 (577)
....--+++-+.+.+.| .++-+.-. + .|.. +..++..|+|.+...+--...+-|.++++.|++.+
T Consensus 177 ~~l~KI~~lr~~~~~~~~~~~I~VDGG-I-------~~~t-----i~~~~~aGAD~~V~GSaIf~a~dp~~~i~~l~~~i 243 (246)
T 3inp_A 177 AMLDKAKEISKWISSTDRDILLEIDGG-V-------NPYN-----IAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRDEL 243 (246)
T ss_dssp THHHHHHHHHHHHHHHTSCCEEEEESS-C-------CTTT-----HHHHHTTTCCEEEESHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCeeEEEECC-c-------CHHH-----HHHHHHcCCCEEEEehHHhCCCCHHHHHHHHHHHH
Confidence 22222334444444445 44433322 1 2333 66788999999998633223457889998888755
Q ss_pred H
Q 008112 436 L 436 (577)
Q Consensus 436 ~ 436 (577)
.
T Consensus 244 ~ 244 (246)
T 3inp_A 244 N 244 (246)
T ss_dssp H
T ss_pred h
Confidence 3
No 50
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=91.58 E-value=0.74 Score=46.42 Aligned_cols=155 Identities=14% Similarity=0.087 Sum_probs=94.7
Q ss_pred CCccCHHHH-HHHHhcCCCEEEEcCCCCHH------HHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEE
Q 008112 274 ITEKDWDDI-KFGVDNKVDFYAVSFVKDAQ------VVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMV 345 (577)
Q Consensus 274 ltekD~~dI-~~al~~gvD~I~~SfV~sa~------dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImI 345 (577)
++..++..| +...+.|++.|-+.+-.+.+ |..++.+.+.+. .++++.+.+-+ .+.++..++. .|.|+|
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~-~~~~v~~l~~n---~~~i~~a~~~G~~~V~i 98 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRA-DGVRYSVLVPN---MKGYEAAAAAHADEIAV 98 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-SSSEEEEECSS---HHHHHHHHHTTCSEEEE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhC-CCCEEEEEeCC---HHHHHHHHHCCCCEEEE
Confidence 455555554 45556899998775422333 344444444332 46677666633 3444444444 788888
Q ss_pred cCCCccCC---------CCCCcHHHHHHHHHHHHHHcCCceE--EEehhhHhhhcCCCCChHhHHHHHH-HHHhccceEE
Q 008112 346 ARGDLGAE---------LPIEEVPLLQEEIIRTCRSMGKAVI--VATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVM 413 (577)
Q Consensus 346 aRGDLg~e---------lg~e~v~~~qk~Ii~~c~~aGKPvi--~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~D~im 413 (577)
. ++.+ .+.++....-+++++.|+++|+.|- +.+-. +......-+..++.+++. +...|+|.+.
T Consensus 99 ~---~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~--~~e~~~~~~~~~~~~~~~~~~~~G~d~i~ 173 (295)
T 1ydn_A 99 F---ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVV--ECPYDGPVTPQAVASVTEQLFSLGCHEVS 173 (295)
T ss_dssp E---EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSS--EETTTEECCHHHHHHHHHHHHHHTCSEEE
T ss_pred E---EecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEe--cCCcCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 3 3333 5666777777889999999999985 32210 000011234566666665 5578999999
Q ss_pred eccccCCCCCHHHHHHHHHHHHHHH
Q 008112 414 LSGETAHGKFPLKAVKVMHTVSLRT 438 (577)
Q Consensus 414 Ls~ETa~G~yP~eaV~~m~~I~~~a 438 (577)
|. +|.=.-.|.+.-+.+..+.+..
T Consensus 174 l~-Dt~G~~~P~~~~~lv~~l~~~~ 197 (295)
T 1ydn_A 174 LG-DTIGRGTPDTVAAMLDAVLAIA 197 (295)
T ss_dssp EE-ETTSCCCHHHHHHHHHHHHTTS
T ss_pred ec-CCCCCcCHHHHHHHHHHHHHhC
Confidence 98 5555567998888888876544
No 51
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=91.52 E-value=2 Score=42.00 Aligned_cols=132 Identities=12% Similarity=0.038 Sum_probs=78.4
Q ss_pred CHHHHHHHHhcCCCEEEEcC--CCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCCCccC--
Q 008112 278 DWDDIKFGVDNKVDFYAVSF--VKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGA-- 352 (577)
Q Consensus 278 D~~dI~~al~~gvD~I~~Sf--V~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGDLg~-- 352 (577)
+.+++..+.+.|+|+|.+-- ..+++.+.++.+.+++. .+.+++.+-|.+ .+....+. +|.|-+.-.++..
T Consensus 90 ~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t~e---ea~~a~~~Gad~Ig~~~~g~t~~~ 164 (229)
T 3q58_A 90 YLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLH--GLLAMADCSTVN---EGISCHQKGIEFIGTTLSGYTGPI 164 (229)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEEECSSHH---HHHHHHHTTCSEEECTTTTSSSSC
T ss_pred cHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHC--CCEEEEecCCHH---HHHHHHhCCCCEEEecCccCCCCC
Confidence 56678888999999987643 34667777777777664 566777665433 23333333 8888653222211
Q ss_pred CCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHH
Q 008112 353 ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 432 (577)
Q Consensus 353 elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~ 432 (577)
......+ ..++..++.++|+|..-. .-|. .|+..+...|+|++++. |++.+ |....+.+.
T Consensus 165 ~~~~~~~-----~li~~l~~~~ipvIA~GG---------I~t~---~d~~~~~~~GadgV~VG--sai~~-p~~~~~~f~ 224 (229)
T 3q58_A 165 TPVEPDL-----AMVTQLSHAGCRVIAEGR---------YNTP---ALAANAIEHGAWAVTVG--SAITR-IEHICQWFS 224 (229)
T ss_dssp CCSSCCH-----HHHHHHHTTTCCEEEESS---------CCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHHHH
T ss_pred cCCCCCH-----HHHHHHHHcCCCEEEECC---------CCCH---HHHHHHHHcCCCEEEEc--hHhcC-hHHHHHHHH
Confidence 1111233 222222233899886433 3344 45777788899999995 56665 766666655
Q ss_pred HH
Q 008112 433 TV 434 (577)
Q Consensus 433 ~I 434 (577)
+.
T Consensus 225 ~~ 226 (229)
T 3q58_A 225 HA 226 (229)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 52
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=91.45 E-value=2.6 Score=39.98 Aligned_cols=137 Identities=11% Similarity=0.104 Sum_probs=76.4
Q ss_pred CHHHHHHHHhcCCCEEEEcCCC--CH-HHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCCCccC-
Q 008112 278 DWDDIKFGVDNKVDFYAVSFVK--DA-QVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGA- 352 (577)
Q Consensus 278 D~~dI~~al~~gvD~I~~SfV~--sa-~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGDLg~- 352 (577)
+.+.+..+++.|+|+|.+.... ++ +.+.++.+.+.+.-.+..++..+-|.+- +....+. +|.|+++.....-
T Consensus 77 ~~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t~~e---~~~~~~~G~d~i~~~~~g~t~~ 153 (223)
T 1y0e_A 77 TSKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIATVEE---AKNAARLGFDYIGTTLHGYTSY 153 (223)
T ss_dssp SHHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSSHHH---HHHHHHTTCSEEECTTTTSSTT
T ss_pred cHHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCCCHHH---HHHHHHcCCCEEEeCCCcCcCC
Confidence 3567888899999998876543 22 2344444444443235666666655432 2222223 8999886433221
Q ss_pred CCCCC-cHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHH
Q 008112 353 ELPIE-EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVM 431 (577)
Q Consensus 353 elg~e-~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m 431 (577)
..+.. ..+ -.+.+-+.+...+.|++..-.+ -+. .|+..++..|+|++++. |++-+ |.++.+.+
T Consensus 154 ~~~~~~~~~-~~~~~~~~~~~~~ipvia~GGI---------~~~---~~~~~~~~~Gad~v~vG--~al~~-p~~~~~~~ 217 (223)
T 1y0e_A 154 TQGQLLYQN-DFQFLKDVLQSVDAKVIAEGNV---------ITP---DMYKRVMDLGVHCSVVG--GAITR-PKEITKRF 217 (223)
T ss_dssp STTCCTTHH-HHHHHHHHHHHCCSEEEEESSC---------CSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHHH
T ss_pred CCCCCCCcc-cHHHHHHHHhhCCCCEEEecCC---------CCH---HHHHHHHHcCCCEEEEC--hHHcC-cHHHHHHH
Confidence 11111 122 1223333344568998875432 233 45667778899999996 44444 77777666
Q ss_pred HH
Q 008112 432 HT 433 (577)
Q Consensus 432 ~~ 433 (577)
.+
T Consensus 218 ~~ 219 (223)
T 1y0e_A 218 VQ 219 (223)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 53
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=91.19 E-value=1.3 Score=46.53 Aligned_cols=120 Identities=18% Similarity=0.271 Sum_probs=70.5
Q ss_pred ccCHHHHHHHHhcCCCEEEE--cCCCCHHHHHHHHHHHHhcCCCceEEEe-ecChhhHhhHHHHHHh-cCEEEEcCCCcc
Q 008112 276 EKDWDDIKFGVDNKVDFYAV--SFVKDAQVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITA-SDGAMVARGDLG 351 (577)
Q Consensus 276 ekD~~dI~~al~~gvD~I~~--SfV~sa~dv~~lr~~l~~~~~~i~IiaK-IEt~~gv~NldeIl~~-sDGImIaRGDLg 351 (577)
+.+.+.++.+++.|+|+|.+ ++-.+ +.+.+..+.+++...+++|+++ +-|++.. ....+. +|+|.++-+- |
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G~~-~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A---~~a~~aGaD~I~Vg~g~-G 173 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHAHA-KYVGKTLKSLRQLLGSRCIMAGNVATYAGA---DYLASCGADIIKAGIGG-G 173 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCCSS-HHHHHHHHHHHHHHTTCEEEEEEECSHHHH---HHHHHTTCSEEEECCSS-S
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCCc-HhHHHHHHHHHHhcCCCeEEEcCcCCHHHH---HHHHHcCCCEEEEcCCC-C
Confidence 34567788899999999987 33223 3222233333333246889996 7776553 333444 9999995221 1
Q ss_pred CCC------CCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 352 AEL------PIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 352 ~el------g~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
-.+ +. .+| |-..+..|.++.+|+|..-.+- .-.|+..++..|+|++|+.
T Consensus 174 ~~~~tr~~~g~-g~p--~l~aI~~~~~~~~PVIAdGGI~------------~~~di~kALa~GAd~V~iG 228 (361)
T 3r2g_A 174 SVCSTRIKTGF-GVP--MLTCIQDCSRADRSIVADGGIK------------TSGDIVKALAFGADFVMIG 228 (361)
T ss_dssp SCHHHHHHHCC-CCC--HHHHHHHHTTSSSEEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred cCccccccCCc-cHH--HHHHHHHHHHhCCCEEEECCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 000 00 112 3344444554445888654432 2367999999999999984
No 54
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=91.12 E-value=3.5 Score=44.71 Aligned_cols=119 Identities=23% Similarity=0.262 Sum_probs=74.2
Q ss_pred cCHHHHHHHHhcCCCEEEE--cCCCCH---HHHHHHHHHHHhcCCCceEEEe-ecChhhHhhHHHHHHh-cCEEEEcC--
Q 008112 277 KDWDDIKFGVDNKVDFYAV--SFVKDA---QVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITA-SDGAMVAR-- 347 (577)
Q Consensus 277 kD~~dI~~al~~gvD~I~~--SfV~sa---~dv~~lr~~l~~~~~~i~IiaK-IEt~~gv~NldeIl~~-sDGImIaR-- 347 (577)
...+.++.+++.|+|+|.+ ++-... +.++++++.+ .++.|+++ +.|.+....+ .+. +|+|.++.
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~----~~~pvi~~~v~t~~~a~~l---~~aGad~I~vg~~~ 327 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKY----PHLQVIGGNVVTAAQAKNL---IDAGVDGLRVGMGC 327 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHC----TTCEEEEEEECSHHHHHHH---HHHTCSEEEECSSC
T ss_pred hhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhC----CCCceEecccchHHHHHHH---HHcCCCEEEECCCC
Confidence 3467778889999999998 433332 3344444332 36788885 7776554433 334 99999964
Q ss_pred CCccCC-----CCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 348 GDLGAE-----LPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 348 GDLg~e-----lg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
|--... .+.. .+.....+-+.++..++|+|.+..+- ...|+..++..|+|++++.
T Consensus 328 G~~~~t~~~~~~g~~-~~~~~~~~~~~~~~~~ipVia~GGI~------------~~~di~kala~GAd~V~iG 387 (514)
T 1jcn_A 328 GSICITQEVMACGRP-QGTAVYKVAEYARRFGVPIIADGGIQ------------TVGHVVKALALGASTVMMG 387 (514)
T ss_dssp SCCBTTBCCCSCCCC-HHHHHHHHHHHHGGGTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred CcccccccccCCCcc-chhHHHHHHHHHhhCCCCEEEECCCC------------CHHHHHHHHHcCCCeeeEC
Confidence 311000 1111 23444556666677799998754432 2467889999999999985
No 55
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=90.98 E-value=1.8 Score=41.74 Aligned_cols=98 Identities=18% Similarity=0.155 Sum_probs=67.0
Q ss_pred hHHHHHHHHHHHhhcCc-eEEEEcCChHHHHHHHhhCCCCeEEEEcC------------cHHHhhhhcccCCeeEEEec-
Q 008112 460 SEMFAYHATMMSNTLGT-SIVVFTRTGFMAILLSHYRPSGTIFAFTN------------EKRIQQRLSLYQGVCPIYME- 525 (577)
Q Consensus 460 ~~~ia~~a~~~a~~~~a-aIiV~T~sG~tA~~is~~RP~~PIIAvT~------------~~~taR~L~L~~GV~Pvl~~- 525 (577)
++.....|++-|.+++. .|||.|.||.||..+...-....|++||+ ++++.+.|. -.|+.-+...
T Consensus 28 T~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~-~~G~~V~t~tH 106 (201)
T 1vp8_A 28 TEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPPEVEEELR-KRGAKIVRQSH 106 (201)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHHHHHHHH-HTTCEEEECCC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcCCHHHHHHHH-hCCCEEEEEec
Confidence 45666678888899998 99999999999999999887789999994 355555442 2333322110
Q ss_pred -----------cC--CCHHHHHHHHHH---------------HHHHcCCCCCCCEEEEEecC
Q 008112 526 -----------FS--DDAEETFDNALG---------------LLQKQGMVKEGEEVALLQSG 559 (577)
Q Consensus 526 -----------~~--~d~d~~i~~al~---------------~l~e~Gllk~GD~VVvv~G~ 559 (577)
.+ ...-+.+..++. .+.+.|++.. +.||.+.|.
T Consensus 107 ~lsgveR~is~kfGG~~p~eiiA~tLR~~fgqG~KV~vEi~lMAaDAGlIp~-eeVIAiGGT 167 (201)
T 1vp8_A 107 ILSGLERSISRKLGGVSRTEAIAEALRSLFGHGLKVCVEITIMAADSGAIPI-EEVVAVGGR 167 (201)
T ss_dssp TTTTTHHHHHHHTCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTSSCS-SCEEEEECS
T ss_pred cccchhHHHHHhcCCCCHHHHHHHHHHHHhcCCceEEEEEeeeecccCCCCc-ceEEEEccc
Confidence 01 123344444444 4568899999 899988774
No 56
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=90.81 E-value=1.4 Score=45.06 Aligned_cols=111 Identities=15% Similarity=0.203 Sum_probs=68.7
Q ss_pred HHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEE-cCCCccCCCCCC
Q 008112 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMV-ARGDLGAELPIE 357 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImI-aRGDLg~elg~e 357 (577)
+.++.+.+.|+|+|.+++=...+.++.+++ . .++++.++.+.+-. ..+.+. +|+|.+ ++ +-|-..+..
T Consensus 79 ~~~~~a~~~g~d~V~~~~g~p~~~i~~l~~----~--g~~v~~~v~~~~~a---~~~~~~GaD~i~v~g~-~~GG~~g~~ 148 (332)
T 2z6i_A 79 DIVDLVIEEGVKVVTTGAGNPSKYMERFHE----A--GIIVIPVVPSVALA---KRMEKIGADAVIAEGM-EAGGHIGKL 148 (332)
T ss_dssp HHHHHHHHTTCSEEEECSSCGGGTHHHHHH----T--TCEEEEEESSHHHH---HHHHHTTCSCEEEECT-TSSEECCSS
T ss_pred HHHHHHHHCCCCEEEECCCChHHHHHHHHH----c--CCeEEEEeCCHHHH---HHHHHcCCCEEEEECC-CCCCCCCCc
Confidence 557788899999999988544444444443 2 58899999876543 334444 899998 43 222222211
Q ss_pred cHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 358 EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 358 ~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
.-...-+++ ....++|+|.+..+- +. .|+..++..|+|++++.
T Consensus 149 ~~~~ll~~i---~~~~~iPViaaGGI~---------~~---~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 149 TTMTLVRQV---ATAISIPVIAAGGIA---------DG---EGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp CHHHHHHHH---HHHCSSCEEEESSCC---------SH---HHHHHHHHTTCSEEEEC
T ss_pred cHHHHHHHH---HHhcCCCEEEECCCC---------CH---HHHHHHHHcCCCEEEec
Confidence 111222222 234589999876533 22 46778888999999984
No 57
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=90.69 E-value=1.9 Score=42.54 Aligned_cols=135 Identities=14% Similarity=0.092 Sum_probs=84.2
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhc---------CCCceEEEeecChhhHhhHHHHHHhcCEEEE---c
Q 008112 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSC---------GADIHVIVKIESADSIPNLHSIITASDGAMV---A 346 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~---------~~~i~IiaKIEt~~gv~NldeIl~~sDGImI---a 346 (577)
...++.+.+.|+|+|.+..-.+ +++.++.+.+.+. |..+.+...-+|+ ++.+++++..+|.|.+ .
T Consensus 82 ~~~i~~~~~aGAd~itvH~ea~-~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp--~~~l~~~l~~~D~vlvMsv~ 158 (237)
T 3cu2_A 82 LEVAKAVVANGANLVTLQLEQY-HDFALTIEWLAKQKTTYANQVYPVLIGACLCPETP--ISELEPYLDQIDVIQLLTLD 158 (237)
T ss_dssp HHHHHHHHHTTCSEEEEETTCT-TSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSC--GGGGTTTTTTCSEEEEESEE
T ss_pred HHHHHHHHHcCCCEEEEecCCc-ccHHHHHHHHHhcccccccccCCceEEEEEeCCCh--HHHHHHHhhcCceeeeeeec
Confidence 4567778899999998876555 6677777777766 5555555544665 6778888888998877 4
Q ss_pred CCCccCCCCCCcHHHHHHHHHHHHHHc-----CCceEEEehhhHhhhcCCCCChHhHHHHHHHHH--hccceEEeccccC
Q 008112 347 RGDLGAELPIEEVPLLQEEIIRTCRSM-----GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVR--EGADAVMLSGETA 419 (577)
Q Consensus 347 RGDLg~elg~e~v~~~qk~Ii~~c~~a-----GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~--~G~D~imLs~ETa 419 (577)
+| +|-. ...+...++|-+..+.. +.|+.+.-.+ +. ..+..++. .|+|++...+--.
T Consensus 159 pg-fggq---~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI----------~~---~~~~~~~~~~aGad~~VvGSaIf 221 (237)
T 3cu2_A 159 PR-NGTK---YPSELILDRVIQVEKRLGNRRVEKLINIDGSM----------TL---ELAKYFKQGTHQIDWLVSGSALF 221 (237)
T ss_dssp TT-TTEE---CCHHHHHHHHHHHHHHHGGGGGGCEEEEESSC----------CH---HHHHHHHHSSSCCCCEEECGGGG
T ss_pred cC-cCCe---ecChhHHHHHHHHHHHHHhcCCCceEEEECCc----------CH---HHHHHHHHhCCCCcEEEEeeHHh
Confidence 43 2211 12444444333333222 5676554321 12 23556778 8999999864332
Q ss_pred CCCCHHHHHHHHHHH
Q 008112 420 HGKFPLKAVKVMHTV 434 (577)
Q Consensus 420 ~G~yP~eaV~~m~~I 434 (577)
.. -|.++++.+++.
T Consensus 222 ~~-d~~~~~~~l~~~ 235 (237)
T 3cu2_A 222 SG-ELKTNLKVWKSS 235 (237)
T ss_dssp SS-CHHHHHHHHHHH
T ss_pred CC-CHHHHHHHHHHh
Confidence 33 688999888653
No 58
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=90.53 E-value=2.4 Score=44.05 Aligned_cols=122 Identities=15% Similarity=0.152 Sum_probs=71.5
Q ss_pred CHHHHHHHHhc--CCCEEEEcCC-CCHHHHHHHHHHHHhcCCCceEEEe-ecChhhHhhHHHHHHh-cCEEEEcCCCccC
Q 008112 278 DWDDIKFGVDN--KVDFYAVSFV-KDAQVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITA-SDGAMVARGDLGA 352 (577)
Q Consensus 278 D~~dI~~al~~--gvD~I~~SfV-~sa~dv~~lr~~l~~~~~~i~IiaK-IEt~~gv~NldeIl~~-sDGImIaRGDLg~ 352 (577)
+.+.+...++. |+|++.+.+- .+..++.+..+.+.+...++.++++ +-|. +......+. +|+|.++-|-=+.
T Consensus 119 ~~~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~---e~A~~a~~aGaD~I~v~~g~G~~ 195 (351)
T 2c6q_A 119 DFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTG---EMVEELILSGADIIKVGIGPGSV 195 (351)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEEECSH---HHHHHHHHTTCSEEEECSSCSTT
T ss_pred HHHHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEeCCCH---HHHHHHHHhCCCEEEECCCCCcC
Confidence 34556666666 8998876532 1233333333334333335777764 5543 334444444 9999986331000
Q ss_pred C-------CCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 353 E-------LPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 353 e-------lg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
+ .+.. ....-.++.+.+...++|+|.+..+. .-.|++.|+..|+|++++.
T Consensus 196 ~~~r~~~g~~~p-~~~~l~~v~~~~~~~~ipvIa~GGI~------------~g~di~kAlalGA~~V~vG 252 (351)
T 2c6q_A 196 CTTRKKTGVGYP-QLSAVMECADAAHGLKGHIISDGGCS------------CPGDVAKAFGAGADFVMLG 252 (351)
T ss_dssp BCHHHHHCBCCC-HHHHHHHHHHHHHHTTCEEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred cCccccCCCCcc-HHHHHHHHHHHHhhcCCcEEEeCCCC------------CHHHHHHHHHcCCCceecc
Confidence 1 0111 23344566677777899999766544 2467999999999999985
No 59
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=90.42 E-value=2.9 Score=39.55 Aligned_cols=137 Identities=12% Similarity=0.133 Sum_probs=78.5
Q ss_pred HHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEE-cCC-Cc-cCCCCCC
Q 008112 281 DIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMV-ARG-DL-GAELPIE 357 (577)
Q Consensus 281 dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImI-aRG-DL-g~elg~e 357 (577)
.++.+.+.|+|+|.+.--.. ++..++.+.+.+.| ..++.-+.+....+.+.++...+|.|++ +.+ -+ |...+..
T Consensus 76 ~i~~~~~~gad~v~vh~~~~-~~~~~~~~~~~~~g--~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~~~~~~ 152 (220)
T 2fli_A 76 YVEAFAQAGADIMTIHTEST-RHIHGALQKIKAAG--MKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFIPE 152 (220)
T ss_dssp GHHHHHHHTCSEEEEEGGGC-SCHHHHHHHHHHTT--SEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSCCCCGG
T ss_pred HHHHHHHcCCCEEEEccCcc-ccHHHHHHHHHHcC--CcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCcccccCHH
Confidence 46778889999998865544 55666666666554 4455555333334455555666898865 321 11 2222222
Q ss_pred cHHHHHHHHHHHHHHc--CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHH
Q 008112 358 EVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTV 434 (577)
Q Consensus 358 ~v~~~qk~Ii~~c~~a--GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I 434 (577)
.+ .--+++-+.+... +.|++++-. + .| .++..+...|+|++..+.---.+..|.++++.+.+.
T Consensus 153 ~~-~~i~~~~~~~~~~~~~~~i~v~GG-I-------~~-----~~~~~~~~~Gad~vvvGsai~~~~d~~~a~~~~~~~ 217 (220)
T 2fli_A 153 CL-EKVATVAKWRDEKGLSFDIEVDGG-V-------DN-----KTIRACYEAGANVFVAGSYLFKASDLVSQVQTLRTA 217 (220)
T ss_dssp GH-HHHHHHHHHHHHTTCCCEEEEESS-C-------CT-----TTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHHhcCCCceEEEECc-C-------CH-----HHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHH
Confidence 11 1122333333333 567665432 2 22 245566667999999875544556799999888654
No 60
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=90.39 E-value=2.3 Score=41.73 Aligned_cols=139 Identities=14% Similarity=0.098 Sum_probs=86.4
Q ss_pred HHHHHHhcCCCEEEEcCCC-CHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEE---cCCCccCCCCC
Q 008112 281 DIKFGVDNKVDFYAVSFVK-DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMV---ARGDLGAELPI 356 (577)
Q Consensus 281 dI~~al~~gvD~I~~SfV~-sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImI---aRGDLg~elg~ 356 (577)
.++.+.+.|+|+|.+..-. + .++.++.+.+++.|....+...-.|+ ++.+++++..+|.|++ -+|==|-...
T Consensus 72 ~i~~~~~aGAd~itvh~Ea~~-~~~~~~i~~i~~~G~k~gv~lnp~tp--~~~~~~~l~~~D~VlvmsV~pGfggQ~f~- 147 (231)
T 3ctl_A 72 YIAQLARAGADFITLHPETIN-GQAFRLIDEIRRHDMKVGLILNPETP--VEAMKYYIHKADKITVMTVDPGFAGQPFI- 147 (231)
T ss_dssp THHHHHHHTCSEEEECGGGCT-TTHHHHHHHHHHTTCEEEEEECTTCC--GGGGTTTGGGCSEEEEESSCTTCSSCCCC-
T ss_pred HHHHHHHcCCCEEEECcccCC-ccHHHHHHHHHHcCCeEEEEEECCCc--HHHHHHHHhcCCEEEEeeeccCcCCcccc-
Confidence 4677789999999988644 3 46788888888888777766655565 7788888889998875 2221121221
Q ss_pred CcHHHHHHHHHHHHHHc--CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec-cccCCCCC-HHHHHHHHH
Q 008112 357 EEVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS-GETAHGKF-PLKAVKVMH 432 (577)
Q Consensus 357 e~v~~~qk~Ii~~c~~a--GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs-~ETa~G~y-P~eaV~~m~ 432 (577)
+....--+++-+..... +.++.+.-.+ .|.. +..++..|+|.+... +---..+- |.++++.++
T Consensus 148 ~~~l~kI~~lr~~~~~~~~~~~I~VdGGI--------~~~~-----~~~~~~aGAd~~V~G~saif~~~d~~~~~~~~l~ 214 (231)
T 3ctl_A 148 PEMLDKLAELKAWREREGLEYEIEVDGSC--------NQAT-----YEKLMAAGADVFIVGTSGLFNHAENIDEAWRIMT 214 (231)
T ss_dssp TTHHHHHHHHHHHHHHHTCCCEEEEESCC--------STTT-----HHHHHHHTCCEEEECTTTTGGGCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCceEEEECCc--------CHHH-----HHHHHHcCCCEEEEccHHHhCCCCcHHHHHHHHH
Confidence 12222223333334333 4565543221 2222 556778899999986 43322334 899999998
Q ss_pred HHHH
Q 008112 433 TVSL 436 (577)
Q Consensus 433 ~I~~ 436 (577)
+...
T Consensus 215 ~~~~ 218 (231)
T 3ctl_A 215 AQIL 218 (231)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7554
No 61
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=89.69 E-value=2.7 Score=42.99 Aligned_cols=112 Identities=22% Similarity=0.268 Sum_probs=69.8
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCCCccCCCC-C
Q 008112 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELP-I 356 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGDLg~elg-~ 356 (577)
.+.++.+++.|+|+|.+.+=...+.++.+++ ..++++.++-+.+-.. ...+. +|+|.+--.+.|-..| .
T Consensus 92 ~~~~~~~~~~g~d~V~l~~g~p~~~~~~l~~------~g~~v~~~v~s~~~a~---~a~~~GaD~i~v~g~~~GG~~G~~ 162 (326)
T 3bo9_A 92 DDLVKVCIEEKVPVVTFGAGNPTKYIRELKE------NGTKVIPVVASDSLAR---MVERAGADAVIAEGMESGGHIGEV 162 (326)
T ss_dssp HHHHHHHHHTTCSEEEEESSCCHHHHHHHHH------TTCEEEEEESSHHHHH---HHHHTTCSCEEEECTTSSEECCSS
T ss_pred HHHHHHHHHCCCCEEEECCCCcHHHHHHHHH------cCCcEEEEcCCHHHHH---HHHHcCCCEEEEECCCCCccCCCc
Confidence 4667778899999999988766555544443 2578888887655433 33344 8999983222322222 1
Q ss_pred CcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 357 EEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 357 e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
..+.. -++ ..+..++|+|.+..+- ...|+..++..|+|++++.
T Consensus 163 ~~~~l-l~~---i~~~~~iPviaaGGI~------------~~~dv~~al~~GA~gV~vG 205 (326)
T 3bo9_A 163 TTFVL-VNK---VSRSVNIPVIAAGGIA------------DGRGMAAAFALGAEAVQMG 205 (326)
T ss_dssp CHHHH-HHH---HHHHCSSCEEEESSCC------------SHHHHHHHHHHTCSEEEES
T ss_pred cHHHH-HHH---HHHHcCCCEEEECCCC------------CHHHHHHHHHhCCCEEEec
Confidence 12211 122 2334589999876532 2356888888999999974
No 62
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=89.44 E-value=2.7 Score=39.40 Aligned_cols=132 Identities=12% Similarity=0.087 Sum_probs=75.0
Q ss_pred HHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEee--cChhhHhhHHHHHHh-cCEEEEcCCCccCCCCCCc
Q 008112 282 IKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKI--ESADSIPNLHSIITA-SDGAMVARGDLGAELPIEE 358 (577)
Q Consensus 282 I~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKI--Et~~gv~NldeIl~~-sDGImIaRGDLg~elg~e~ 358 (577)
++.+.+.|+|+|.++.-...+.+.++++.+++.|..+. ++.. .|++. .+.++.+. .|.+-+.++-.+...+..-
T Consensus 70 ~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~g-v~~~s~~~p~~--~~~~~~~~g~d~v~~~~~~~~~~~g~~~ 146 (207)
T 3ajx_A 70 ADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVV-VDLIGIEDKAT--RAQEVRALGAKFVEMHAGLDEQAKPGFD 146 (207)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEE-EECTTCSSHHH--HHHHHHHTTCSEEEEECCHHHHTSTTCC
T ss_pred HHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCceE-EEEecCCChHH--HHHHHHHhCCCEEEEEecccccccCCCc
Confidence 56778899999998776666788889888877655432 2222 12222 12233222 7888333333222222221
Q ss_pred HHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHH
Q 008112 359 VPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 433 (577)
Q Consensus 359 v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~ 433 (577)
.. +++-+.+.. ..|+++.-.+ .|. .+..++..|+|++....--..-..|.++++.+.+
T Consensus 147 ~~---~~i~~~~~~-~~pi~v~GGI--------~~~-----~~~~~~~aGad~vvvGsaI~~~~dp~~~~~~~~~ 204 (207)
T 3ajx_A 147 LN---GLLAAGEKA-RVPFSVAGGV--------KVA-----TIPAVQKAGAEVAVAGGAIYGAADPAAAAKELRA 204 (207)
T ss_dssp TH---HHHHHHHHH-TSCEEEESSC--------CGG-----GHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHH
T ss_pred hH---HHHHHhhCC-CCCEEEECCc--------CHH-----HHHHHHHcCCCEEEEeeeccCCCCHHHHHHHHHH
Confidence 11 333333333 6777653221 121 4667789999999986443334468888887754
No 63
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=89.17 E-value=2.5 Score=43.61 Aligned_cols=158 Identities=9% Similarity=-0.008 Sum_probs=99.1
Q ss_pred CCccCHHHHHH-H-HhcCCCEEEE-cCCCCHHHHHHHHHHHHh-----cCCCceEEEeecChhhHhhHHHHHHh-cCEE-
Q 008112 274 ITEKDWDDIKF-G-VDNKVDFYAV-SFVKDAQVVHELKNYLKS-----CGADIHVIVKIESADSIPNLHSIITA-SDGA- 343 (577)
Q Consensus 274 ltekD~~dI~~-a-l~~gvD~I~~-SfV~sa~dv~~lr~~l~~-----~~~~i~IiaKIEt~~gv~NldeIl~~-sDGI- 343 (577)
++..|+..|.. . .+.|+|.|=+ +|+.++++.+.+++.... .-++..+.+-+=+.. .++..++. .|.|
T Consensus 38 ~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~~~---~i~~a~~~g~~~v~ 114 (337)
T 3ble_A 38 FSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTERIEILGFVDGNK---TVDWIKDSGAKVLN 114 (337)
T ss_dssp CCHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEESSTTH---HHHHHHHHTCCEEE
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEEccchh---hHHHHHHCCCCEEE
Confidence 55566555543 4 4589999877 678788666666654432 223456666665544 55555544 6644
Q ss_pred -EEcCCCcc----CCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhccceEEeccc
Q 008112 344 -MVARGDLG----AELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSGE 417 (577)
Q Consensus 344 -mIaRGDLg----~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~D~imLs~E 417 (577)
+++--|+- .....++.....+++++.|+++|+.|.+....+ -..+.-+...+.+++. +...|+|.|.|. +
T Consensus 115 i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~-D 190 (337)
T 3ble_A 115 LLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDW---SNGFRNSPDYVKSLVEHLSKEHIERIFLP-D 190 (337)
T ss_dssp EEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETH---HHHHHHCHHHHHHHHHHHHTSCCSEEEEE-C
T ss_pred EEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEC---CCCCcCCHHHHHHHHHHHHHcCCCEEEEe-c
Confidence 44333321 122344555667788999999999987653320 0011223455556665 556799999995 8
Q ss_pred cCCCCCHHHHHHHHHHHHHHH
Q 008112 418 TAHGKFPLKAVKVMHTVSLRT 438 (577)
Q Consensus 418 Ta~G~yP~eaV~~m~~I~~~a 438 (577)
|.=.-.|.++-+.+..+.++.
T Consensus 191 T~G~~~P~~v~~lv~~l~~~~ 211 (337)
T 3ble_A 191 TLGVLSPEETFQGVDSLIQKY 211 (337)
T ss_dssp TTCCCCHHHHHHHHHHHHHHC
T ss_pred CCCCcCHHHHHHHHHHHHHhc
Confidence 888889999999888887765
No 64
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=88.92 E-value=4.7 Score=40.09 Aligned_cols=68 Identities=12% Similarity=0.177 Sum_probs=49.1
Q ss_pred HHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCC-CceEEEeec--C-hhhHhhHHHHHHh-cCEEEEcCCCccCC
Q 008112 283 KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGA-DIHVIVKIE--S-ADSIPNLHSIITA-SDGAMVARGDLGAE 353 (577)
Q Consensus 283 ~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~-~i~IiaKIE--t-~~gv~NldeIl~~-sDGImIaRGDLg~e 353 (577)
+.+.+.|+|||-+||-.+.++++++++.. +. .+..+.-|- | .++++|+.+.++. +||+.++|.=+..+
T Consensus 166 ~~a~~~GAD~vkt~~~~~~e~~~~~~~~~---~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~~ 238 (263)
T 1w8s_A 166 RIALELGADAMKIKYTGDPKTFSWAVKVA---GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQRR 238 (263)
T ss_dssp HHHHHHTCSEEEEECCSSHHHHHHHHHHT---TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTST
T ss_pred HHHHHcCCCEEEEcCCCCHHHHHHHHHhC---CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCCc
Confidence 56788999999999976788888887654 22 244444453 3 4567788888877 89999998755443
No 65
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=88.91 E-value=1.1 Score=43.69 Aligned_cols=138 Identities=12% Similarity=0.135 Sum_probs=79.7
Q ss_pred HHHHHHHhcCCCEEEEcCC--CCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEcCCCccCC--CC
Q 008112 280 DDIKFGVDNKVDFYAVSFV--KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAE--LP 355 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV--~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIaRGDLg~e--lg 355 (577)
+.++.+.+.|+|+|.+..- .. ++..++.+.+.+.|..+.+...-.|+ .+.+.+++..+|.|.+..-.-|.. --
T Consensus 76 ~~i~~~~~aGadgv~vh~e~~~~-~~~~~~~~~i~~~g~~~gv~~~p~t~--~e~~~~~~~~~D~v~~msv~pg~ggq~~ 152 (230)
T 1tqj_A 76 KYVEDFAKAGADIISVHVEHNAS-PHLHRTLCQIRELGKKAGAVLNPSTP--LDFLEYVLPVCDLILIMSVNPGFGGQSF 152 (230)
T ss_dssp GTHHHHHHHTCSEEEEECSTTTC-TTHHHHHHHHHHTTCEEEEEECTTCC--GGGGTTTGGGCSEEEEESSCC----CCC
T ss_pred HHHHHHHHcCCCEEEECcccccc-hhHHHHHHHHHHcCCcEEEEEeCCCc--HHHHHHHHhcCCEEEEEEeccccCCccC
Confidence 3567778899999998865 33 45556666666666555544444554 556778888899887764333211 11
Q ss_pred CCcHHHHHHHHHHHHHHc--CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHH
Q 008112 356 IEEVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 433 (577)
Q Consensus 356 ~e~v~~~qk~Ii~~c~~a--GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~ 433 (577)
.+.....-+++-+.+.+. +.|+.+.-.+ .+. .+..+...|+|++...+---..+-|.++++.+++
T Consensus 153 ~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI--------~~~-----~~~~~~~aGad~vvvGSai~~a~d~~~~~~~l~~ 219 (230)
T 1tqj_A 153 IPEVLPKIRALRQMCDERGLDPWIEVDGGL--------KPN-----NTWQVLEAGANAIVAGSAVFNAPNYAEAIAGVRN 219 (230)
T ss_dssp CGGGHHHHHHHHHHHHHHTCCCEEEEESSC--------CTT-----TTHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHhcCCCCcEEEECCc--------CHH-----HHHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHH
Confidence 112222233333333322 6776653321 122 2445566799999986443334468888888764
No 66
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=88.66 E-value=2.2 Score=44.88 Aligned_cols=121 Identities=18% Similarity=0.295 Sum_probs=70.8
Q ss_pred cCHHHHHHHHhcCCCEEEE--cCCCCHHHHHHHHHHHHhcCCCceEEE-eecChhhHhhHHHHHHh-cCEEEEcCCCccC
Q 008112 277 KDWDDIKFGVDNKVDFYAV--SFVKDAQVVHELKNYLKSCGADIHVIV-KIESADSIPNLHSIITA-SDGAMVARGDLGA 352 (577)
Q Consensus 277 kD~~dI~~al~~gvD~I~~--SfV~sa~dv~~lr~~l~~~~~~i~Iia-KIEt~~gv~NldeIl~~-sDGImIaRGDLg~ 352 (577)
.+.+.++.+++.|+|+|.+ ++ .+++.+.++.+.+.+.-.+++|++ .+-+.+ .+....+. +|+|.++-+ -|.
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~~~-g~~~~~~e~i~~ir~~~~~~pviv~~v~~~~---~a~~a~~~Gad~I~vg~~-~G~ 227 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDSAH-GHSTRIIELIKKIKTKYPNLDLIAGNIVTKE---AALDLISVGADCLKVGIG-PGS 227 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECCSC-CSSHHHHHHHHHHHHHCTTCEEEEEEECSHH---HHHHHHTTTCSEEEECSS-CST
T ss_pred hHHHHHHHHHHCCCCEEEEeCCC-CChHHHHHHHHHHHHHCCCCeEEEcCCCcHH---HHHHHHhcCCCEEEECCC-CCc
Confidence 3466777788999999987 44 233444444444443322567775 455543 33333344 899999521 111
Q ss_pred --------CCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 353 --------ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 353 --------elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
..+... ......+.+.+...++|+|.+..+- ...|+..++..|+|++++.
T Consensus 228 ~~~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipVia~GGI~------------~~~d~~~ala~GAd~V~iG 285 (404)
T 1eep_A 228 ICTTRIVAGVGVPQ-ITAICDVYEACNNTNICIIADGGIR------------FSGDVVKAIAAGADSVMIG 285 (404)
T ss_dssp TSHHHHHHCCCCCH-HHHHHHHHHHHTTSSCEEEEESCCC------------SHHHHHHHHHHTCSEEEEC
T ss_pred CcCccccCCCCcch-HHHHHHHHHHHhhcCceEEEECCCC------------CHHHHHHHHHcCCCHHhhC
Confidence 012111 2333445555555689998755433 2367889999999999984
No 67
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=88.33 E-value=7.8 Score=40.09 Aligned_cols=112 Identities=20% Similarity=0.280 Sum_probs=67.7
Q ss_pred HHHHHHHHhcCCCEEEEcCCC-CHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEE-cCC---CccC
Q 008112 279 WDDIKFGVDNKVDFYAVSFVK-DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMV-ARG---DLGA 352 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~-sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImI-aRG---DLg~ 352 (577)
.+.++.+++.|+|+|.+++=. +.+.++++++ .++.++.++-|.+- +....+. +|+|.+ ++. -.|.
T Consensus 112 ~~~~~~~~~~g~~~V~~~~g~~~~~~i~~~~~------~g~~v~~~v~t~~~---a~~a~~~GaD~i~v~g~~~GGh~g~ 182 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFHFGVPDREVIARLRR------AGTLTLVTATTPEE---ARAVEAAGADAVIAQGVEAGGHQGT 182 (369)
T ss_dssp HHHHHHHHHSCCSEEEEESSCCCHHHHHHHHH------TTCEEEEEESSHHH---HHHHHHTTCSEEEEECTTCSEECCC
T ss_pred HHHHHHHHhcCCCEEEEeCCCCcHHHHHHHHH------CCCeEEEECCCHHH---HHHHHHcCCCEEEEeCCCcCCcCCC
Confidence 456778889999999998754 3455655553 24678888876543 3233333 899999 542 1122
Q ss_pred CCC--------CCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 353 ELP--------IEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 353 elg--------~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
..+ ...+ ..-+++ .....+|+|.+-.+- + -.++..++..|+|+|++.
T Consensus 183 ~~~~~~~~~~~~~~~-~~l~~i---~~~~~iPViaaGGI~---------~---~~~~~~~l~~GAd~V~vG 237 (369)
T 3bw2_A 183 HRDSSEDDGAGIGLL-SLLAQV---REAVDIPVVAAGGIM---------R---GGQIAAVLAAGADAAQLG 237 (369)
T ss_dssp SSCCGGGTTCCCCHH-HHHHHH---HHHCSSCEEEESSCC---------S---HHHHHHHHHTTCSEEEES
T ss_pred cccccccccccccHH-HHHHHH---HHhcCceEEEECCCC---------C---HHHHHHHHHcCCCEEEEC
Confidence 111 1112 112222 234589999876542 2 245778888999999985
No 68
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=88.18 E-value=3.2 Score=48.96 Aligned_cols=118 Identities=14% Similarity=0.284 Sum_probs=70.9
Q ss_pred HHHHhcCCCEEEEcC----C-----------CCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-----cCE
Q 008112 283 KFGVDNKVDFYAVSF----V-----------KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-----SDG 342 (577)
Q Consensus 283 ~~al~~gvD~I~~Sf----V-----------~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-----sDG 342 (577)
+.+.+.|+|+|.+.+ . ++++.+.++.+.+.+. .+++|++|+ ++ .+.++.+++.. +|+
T Consensus 655 ~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~-~~~Pv~vK~-~~-~~~~~~~~a~~~~~~G~d~ 731 (1025)
T 1gte_A 655 RKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQA-VQIPFFAKL-TP-NVTDIVSIARAAKEGGADG 731 (1025)
T ss_dssp HHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHH-CSSCEEEEE-CS-CSSCHHHHHHHHHHHTCSE
T ss_pred HHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHh-hCCceEEEe-CC-ChHHHHHHHHHHHHcCCCE
Confidence 344568999998854 2 4555566666666543 258899998 33 44455665553 899
Q ss_pred EEEc-----------------------CCCccCCCCCCcHHHHHHHHHHHHHHc-CCceEEEehhhHhhhcCCCCChHhH
Q 008112 343 AMVA-----------------------RGDLGAELPIEEVPLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEV 398 (577)
Q Consensus 343 ImIa-----------------------RGDLg~elg~e~v~~~qk~Ii~~c~~a-GKPvi~ATq~LeSM~~~~~PtrAEv 398 (577)
|.+. |...+---+....+.....+-+..++. +.|+|....+- | .
T Consensus 732 i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~GGI~---------s---~ 799 (1025)
T 1gte_A 732 VTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGGID---------S---A 799 (1025)
T ss_dssp EEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEESSCC---------S---H
T ss_pred EEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCEEEecCcC---------C---H
Confidence 9982 111111112223343333343444455 78988754433 2 4
Q ss_pred HHHHHHHHhccceEEec
Q 008112 399 SDIAIAVREGADAVMLS 415 (577)
Q Consensus 399 ~Dv~nav~~G~D~imLs 415 (577)
.|+..++..|+|++|+.
T Consensus 800 ~da~~~l~~Ga~~v~vg 816 (1025)
T 1gte_A 800 ESGLQFLHSGASVLQVC 816 (1025)
T ss_dssp HHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHcCCCEEEEe
Confidence 67888888999999995
No 69
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=87.66 E-value=4.1 Score=41.18 Aligned_cols=160 Identities=11% Similarity=0.015 Sum_probs=94.2
Q ss_pred CCccCHHHH-HHHHhcCCCEEEEcC-CCCH-----HHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEE
Q 008112 274 ITEKDWDDI-KFGVDNKVDFYAVSF-VKDA-----QVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMV 345 (577)
Q Consensus 274 ltekD~~dI-~~al~~gvD~I~~Sf-V~sa-----~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImI 345 (577)
++..++..| +...+.|++.|-+.| +... .|..++.+.+.+ ..++.+.+.+.+. ++++.-++. .|.|+|
T Consensus 27 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~~l~~~~---~~i~~a~~aG~~~v~i 102 (302)
T 2ftp_A 27 IEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQ-RPGVTYAALAPNL---KGFEAALESGVKEVAV 102 (302)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCC-CTTSEEEEECCSH---HHHHHHHHTTCCEEEE
T ss_pred CCHHHHHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhh-cCCCEEEEEeCCH---HHHHHHHhCCcCEEEE
Confidence 455555554 455568999987754 3221 344444444432 2456676666443 333333433 788776
Q ss_pred c--CCCc----cCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhccceEEecccc
Q 008112 346 A--RGDL----GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSGET 418 (577)
Q Consensus 346 a--RGDL----g~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~D~imLs~ET 418 (577)
- --|+ -+.++.++....-+++++.|+++|+.|-..--+.-+-.....-+..++.+++. +...|+|.+.|. +|
T Consensus 103 ~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~-DT 181 (302)
T 2ftp_A 103 FAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLG-DT 181 (302)
T ss_dssp EEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEE-ES
T ss_pred EEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEe-CC
Confidence 2 1132 12256677777888999999999999842100000000011234456666555 457899999998 77
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q 008112 419 AHGKFPLKAVKVMHTVSLRT 438 (577)
Q Consensus 419 a~G~yP~eaV~~m~~I~~~a 438 (577)
.=.-.|.+.-+.+..+.+..
T Consensus 182 ~G~~~P~~~~~lv~~l~~~~ 201 (302)
T 2ftp_A 182 IGVGTAGATRRLIEAVASEV 201 (302)
T ss_dssp SSCCCHHHHHHHHHHHTTTS
T ss_pred CCCcCHHHHHHHHHHHHHhC
Confidence 66678998888888776544
No 70
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=87.53 E-value=3.5 Score=44.42 Aligned_cols=121 Identities=19% Similarity=0.261 Sum_probs=70.4
Q ss_pred CHHHHHHHHhcCCCEEEEcCCC--CHHHHHHHHHHHHhcCCCceEEEe-ecChhhHhhHHHHHHh-cCEEEEcCCCccC-
Q 008112 278 DWDDIKFGVDNKVDFYAVSFVK--DAQVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITA-SDGAMVARGDLGA- 352 (577)
Q Consensus 278 D~~dI~~al~~gvD~I~~SfV~--sa~dv~~lr~~l~~~~~~i~IiaK-IEt~~gv~NldeIl~~-sDGImIaRGDLg~- 352 (577)
..+.+.+.++.|+|.|.+.+.. .....+.++ .+.+.-.++.++++ +-|.+. .....+. +|+|.++-+-=+.
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~-~i~~~~p~~pvi~g~~~t~e~---a~~l~~~G~d~I~v~~~~G~~~ 313 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAHGHSRRVIETLE-MIKADYPDLPVVAGNVATPEG---TEALIKAGADAVKVGVGPGSIC 313 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHH-HHHHHCTTSCEEEEEECSHHH---HHHHHHTTCSEEEECSSCSTTC
T ss_pred HHHHHHHHHHhCCCEEEEEecCCchHHHHHHHH-HHHHHCCCceEEeCCcCCHHH---HHHHHHcCCCEEEEcCCCCccc
Confidence 3567788899999999986543 222222222 23222124666653 444333 3333344 9999995331010
Q ss_pred ------CCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 353 ------ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 353 ------elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
..+.. -......+.+.++..+.|+|.+..+- ...|+..++..|+|++++.
T Consensus 314 ~~~~~~~~g~p-~~~~l~~v~~~~~~~~ipvia~GGI~------------~~~di~kala~GAd~V~iG 369 (494)
T 1vrd_A 314 TTRVVAGVGVP-QLTAVMECSEVARKYDVPIIADGGIR------------YSGDIVKALAAGAESVMVG 369 (494)
T ss_dssp HHHHHHCCCCC-HHHHHHHHHHHHHTTTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred cccccCCCCcc-HHHHHHHHHHHHhhcCCCEEEECCcC------------CHHHHHHHHHcCCCEEEEC
Confidence 01111 23344555666666799999765533 2367899999999999985
No 71
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=86.50 E-value=6.2 Score=40.10 Aligned_cols=113 Identities=12% Similarity=0.135 Sum_probs=66.8
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHH-hcCEEEE-cCCCccCCCCC
Q 008112 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT-ASDGAMV-ARGDLGAELPI 356 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~-~sDGImI-aRGDLg~elg~ 356 (577)
.+.++.+++.|+|+|.+.+=...+.++.++ +. .++++.++-|.+-.. ...+ -+|+|.+ ++. -|-..+.
T Consensus 86 ~~~~~~~~~~g~d~V~~~~g~p~~~~~~l~----~~--gi~vi~~v~t~~~a~---~~~~~GaD~i~v~g~~-~GG~~G~ 155 (328)
T 2gjl_A 86 AEYRAAIIEAGIRVVETAGNDPGEHIAEFR----RH--GVKVIHKCTAVRHAL---KAERLGVDAVSIDGFE-CAGHPGE 155 (328)
T ss_dssp HHHHHHHHHTTCCEEEEEESCCHHHHHHHH----HT--TCEEEEEESSHHHHH---HHHHTTCSEEEEECTT-CSBCCCS
T ss_pred HHHHHHHHhcCCCEEEEcCCCcHHHHHHHH----Hc--CCCEEeeCCCHHHHH---HHHHcCCCEEEEECCC-CCcCCCC
Confidence 466778889999999998765544444443 33 578888886654322 2222 3899998 431 1212121
Q ss_pred CcHHHHHHHHHHHH-HHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 357 EEVPLLQEEIIRTC-RSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 357 e~v~~~qk~Ii~~c-~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
...+.. ..+... ...++|++.+..+- + -.|+..++..|+|++++.
T Consensus 156 ~~~~~~--~~l~~v~~~~~iPviaaGGI~---------~---~~~v~~al~~GAdgV~vG 201 (328)
T 2gjl_A 156 DDIPGL--VLLPAAANRLRVPIIASGGFA---------D---GRGLVAALALGADAINMG 201 (328)
T ss_dssp SCCCHH--HHHHHHHTTCCSCEEEESSCC---------S---HHHHHHHHHHTCSEEEES
T ss_pred ccccHH--HHHHHHHHhcCCCEEEECCCC---------C---HHHHHHHHHcCCCEEEEC
Confidence 101111 222222 23489999876542 2 246778888899999984
No 72
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=86.23 E-value=6.8 Score=39.88 Aligned_cols=116 Identities=17% Similarity=0.191 Sum_probs=62.1
Q ss_pred cCCCEEEEcCC----------CCH----HHHHHHHHHHHhc----CCCceEEEeecChhhHhhHHHHHH----h-cCEEE
Q 008112 288 NKVDFYAVSFV----------KDA----QVVHELKNYLKSC----GADIHVIVKIESADSIPNLHSIIT----A-SDGAM 344 (577)
Q Consensus 288 ~gvD~I~~SfV----------~sa----~dv~~lr~~l~~~----~~~i~IiaKIEt~~gv~NldeIl~----~-sDGIm 344 (577)
.|+|+|-+.|- +++ +.++.+|+...+. |.+.+|+.||=.-...+++.++++ . +|+|.
T Consensus 164 ~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~ 243 (336)
T 1f76_A 164 AYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVI 243 (336)
T ss_dssp GGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEE
T ss_pred ccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEE
Confidence 48999877651 122 3344444443211 457899999742212223333333 2 89999
Q ss_pred EcCC-----Ccc-----CCCC-CCc--HHHHHHHHHHHHHH-c--CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhc
Q 008112 345 VARG-----DLG-----AELP-IEE--VPLLQEEIIRTCRS-M--GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREG 408 (577)
Q Consensus 345 IaRG-----DLg-----~elg-~e~--v~~~qk~Ii~~c~~-a--GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G 408 (577)
+.-+ |+. .+.+ +.. +....-..+...++ . ++|+|....+- ...|+..++..|
T Consensus 244 vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~------------~~~da~~~l~~G 311 (336)
T 1f76_A 244 ATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGID------------SVIAAREKIAAG 311 (336)
T ss_dssp ECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCC------------SHHHHHHHHHHT
T ss_pred EeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCC------------CHHHHHHHHHCC
Confidence 8532 210 0110 111 11122233444333 4 78998765433 245688888999
Q ss_pred cceEEec
Q 008112 409 ADAVMLS 415 (577)
Q Consensus 409 ~D~imLs 415 (577)
+|+|++.
T Consensus 312 Ad~V~ig 318 (336)
T 1f76_A 312 ASLVQIY 318 (336)
T ss_dssp CSEEEES
T ss_pred CCEEEee
Confidence 9999996
No 73
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=86.17 E-value=6.9 Score=37.64 Aligned_cols=134 Identities=16% Similarity=0.185 Sum_probs=79.4
Q ss_pred HHHHHHHHhcCCCEEEEc-----CCCC----HHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCC
Q 008112 279 WDDIKFGVDNKVDFYAVS-----FVKD----AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARG 348 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~S-----fV~s----a~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRG 348 (577)
.++++.+.+.|+|++-+= |+.+ .+.++++++.+ +....+-.++.+++ +.++..+++ +||+.+--+
T Consensus 22 ~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~---~~~~~v~lmv~d~~--~~i~~~~~agad~v~vH~~ 96 (228)
T 1h1y_A 22 AAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHT---KAYLDCHLMVTNPS--DYVEPLAKAGASGFTFHIE 96 (228)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTC---CSEEEEEEESSCGG--GGHHHHHHHTCSEEEEEGG
T ss_pred HHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhc---CCcEEEEEEecCHH--HHHHHHHHcCCCEEEECCC
Confidence 345667788899997665 7776 66777776543 22234456777763 357777776 899987511
Q ss_pred CccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHh---ccceEEecc-c-c-CCCC
Q 008112 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVRE---GADAVMLSG-E-T-AHGK 422 (577)
Q Consensus 349 DLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~---G~D~imLs~-E-T-a~G~ 422 (577)
. .+ ....+.++.++++|+.++++.. | .|..| ....+.. ++|.+.+.+ + + .--+
T Consensus 97 ~-------~~--~~~~~~~~~i~~~g~~igv~~~--------p-~t~~e---~~~~~~~~~~~~d~vl~~sv~pg~~g~~ 155 (228)
T 1h1y_A 97 V-------SR--DNWQELIQSIKAKGMRPGVSLR--------P-GTPVE---EVFPLVEAENPVELVLVMTVEPGFGGQK 155 (228)
T ss_dssp G-------CT--TTHHHHHHHHHHTTCEEEEEEC--------T-TSCGG---GGHHHHHSSSCCSEEEEESSCTTCSSCC
T ss_pred C-------cc--cHHHHHHHHHHHcCCCEEEEEe--------C-CCCHH---HHHHHHhcCCCCCEEEEEeecCCCCccc
Confidence 1 11 1114667777889999998652 1 12222 1234446 999998732 1 1 1124
Q ss_pred CHHHHHHHHHHHHHHH
Q 008112 423 FPLKAVKVMHTVSLRT 438 (577)
Q Consensus 423 yP~eaV~~m~~I~~~a 438 (577)
|+...++.++++.+..
T Consensus 156 ~~~~~l~~i~~~~~~~ 171 (228)
T 1h1y_A 156 FMPEMMEKVRALRKKY 171 (228)
T ss_dssp CCGGGHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhc
Confidence 6656666666555444
No 74
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=86.16 E-value=20 Score=36.75 Aligned_cols=158 Identities=11% Similarity=0.049 Sum_probs=101.0
Q ss_pred CCccCHHHHH-HHHhcCCCEEEEc-CCCCHHHHHHHHHHHHhcCCCceEEEee-cChhhHhhHHHHHHh--cC--EEEEc
Q 008112 274 ITEKDWDDIK-FGVDNKVDFYAVS-FVKDAQVVHELKNYLKSCGADIHVIVKI-ESADSIPNLHSIITA--SD--GAMVA 346 (577)
Q Consensus 274 ltekD~~dI~-~al~~gvD~I~~S-fV~sa~dv~~lr~~l~~~~~~i~IiaKI-Et~~gv~NldeIl~~--sD--GImIa 346 (577)
++..|+..|. ...+.|+|.|=+. ++-+++|.+.++..... ..+..+.+-. =+.++++..-+-+.- .| .++++
T Consensus 25 ~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~r~~~~~i~~a~~al~~ag~~~v~i~~s 103 (325)
T 3eeg_A 25 LNTEEKIIVAKALDELGVDVIEAGFPVSSPGDFNSVVEITKA-VTRPTICALTRAKEADINIAGEALRFAKRSRIHTGIG 103 (325)
T ss_dssp CCTTHHHHHHHHHHHHTCSEEEEECTTSCHHHHHHHHHHHHH-CCSSEEEEECCSCHHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHh-CCCCEEEEeecCCHHHHHHHHHhhcccCCCEEEEEec
Confidence 3445555554 4456899999764 45688888888765543 3566666654 234455433222211 33 35555
Q ss_pred CCCcc----CCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHH-HhccceEEeccccCCC
Q 008112 347 RGDLG----AELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAV-REGADAVMLSGETAHG 421 (577)
Q Consensus 347 RGDLg----~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav-~~G~D~imLs~ETa~G 421 (577)
--|+- .....++.....+.+++.|+++|+.|.+.... + ..-+...+.+++..+ ..|+|.|.|. +|.=.
T Consensus 104 ~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d-~-----~~~~~~~~~~~~~~~~~~G~~~i~l~-DT~G~ 176 (325)
T 3eeg_A 104 SSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCED-A-----GRADQAFLARMVEAVIEAGADVVNIP-DTTGY 176 (325)
T ss_dssp CSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEET-G-----GGSCHHHHHHHHHHHHHHTCSEEECC-BSSSC
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccc-c-----ccchHHHHHHHHHHHHhcCCCEEEec-CccCC
Confidence 55542 23455566677788999999999998764431 1 223455566677654 5599999995 89888
Q ss_pred CCHHHHHHHHHHHHHHHh
Q 008112 422 KFPLKAVKVMHTVSLRTE 439 (577)
Q Consensus 422 ~yP~eaV~~m~~I~~~aE 439 (577)
-.|.+.-+.+..+.++..
T Consensus 177 ~~P~~v~~lv~~l~~~~~ 194 (325)
T 3eeg_A 177 MLPWQYGERIKYLMDNVS 194 (325)
T ss_dssp CCHHHHHHHHHHHHHHCS
T ss_pred cCHHHHHHHHHHHHHhCC
Confidence 999999888888876654
No 75
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=85.21 E-value=2.5 Score=41.33 Aligned_cols=131 Identities=9% Similarity=0.071 Sum_probs=78.1
Q ss_pred CCEEEEcCCCCHHHHHHHHH---HHHhcCCCceEEEeecChhhHhhHHHHHH--hcCEEEEcCCCccCCCCCCcHHHHHH
Q 008112 290 VDFYAVSFVKDAQVVHELKN---YLKSCGADIHVIVKIESADSIPNLHSIIT--ASDGAMVARGDLGAELPIEEVPLLQE 364 (577)
Q Consensus 290 vD~I~~SfV~sa~dv~~lr~---~l~~~~~~i~IiaKIEt~~gv~NldeIl~--~sDGImIaRGDLg~elg~e~v~~~qk 364 (577)
+|++.+-.-.+.+++.++.+ .+++.|..+.+-.+-.|+ ++.+++++. ..|.|++-.-+-|.. |..-.+..-+
T Consensus 86 Ad~itvH~ea~~~~~~~~i~~~~~i~~~G~k~gvalnp~tp--~~~~~~~l~~g~~D~VlvmsV~pGf~-gq~f~~~~l~ 162 (227)
T 1tqx_A 86 SNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKTD--VQKLVPILDTNLINTVLVMTVEPGFG-GQSFMHDMMG 162 (227)
T ss_dssp SSEEEEEGGGGTTCHHHHHHHHHHHHTTTCEEEEEECTTSC--GGGGHHHHTTTCCSEEEEESSCTTCS-SCCCCGGGHH
T ss_pred CCEEEEeecCCccCHHHHHHHHHHHHHcCCeEEEEeCCCCc--HHHHHHHhhcCCcCEEEEeeeccCCC-CcccchHHHH
Confidence 99987765544336777777 787777777666555665 778999999 799998753332222 1111222222
Q ss_pred HHHHHHHHc-CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHH
Q 008112 365 EIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSL 436 (577)
Q Consensus 365 ~Ii~~c~~a-GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~ 436 (577)
+|-+..+.. +.++.+.-.+ +. ..+..++..|+|.+...+--...+-|.++++.+++.+.
T Consensus 163 ki~~lr~~~~~~~I~VdGGI----------~~---~ti~~~~~aGAd~~V~GsaIf~~~d~~~~i~~l~~~~~ 222 (227)
T 1tqx_A 163 KVSFLRKKYKNLNIQVDGGL----------NI---ETTEISASHGANIIVAGTSIFNAEDPKYVIDTMRVSVQ 222 (227)
T ss_dssp HHHHHHHHCTTCEEEEESSC----------CH---HHHHHHHHHTCCEEEESHHHHTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCeEEEECCC----------CH---HHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHH
Confidence 222222222 5565544332 11 24667788999999985332233469999999877543
No 76
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=85.08 E-value=9.5 Score=36.43 Aligned_cols=102 Identities=13% Similarity=0.116 Sum_probs=65.8
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCCCccCCCCCC
Q 008112 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIE 357 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGDLg~elg~e 357 (577)
.+.++.+++.|+++|-+.+ +++...+.++. +.+ .+..+-+-. .---+.++.-++. +|++..+-.|
T Consensus 28 ~~~~~~l~~gGv~~iel~~-k~~~~~~~i~~-~~~--~~~~~gag~--vl~~d~~~~A~~~GAd~v~~~~~d-------- 93 (207)
T 2yw3_A 28 LGLARVLEEEGVGALEITL-RTEKGLEALKA-LRK--SGLLLGAGT--VRSPKEAEAALEAGAAFLVSPGLL-------- 93 (207)
T ss_dssp HHHHHHHHHTTCCEEEEEC-SSTHHHHHHHH-HTT--SSCEEEEES--CCSHHHHHHHHHHTCSEEEESSCC--------
T ss_pred HHHHHHHHHcCCCEEEEeC-CChHHHHHHHH-HhC--CCCEEEeCe--EeeHHHHHHHHHcCCCEEEcCCCC--------
Confidence 4456677889999999986 45555544443 333 455544443 2222555555555 8999865322
Q ss_pred cHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEe
Q 008112 358 EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML 414 (577)
Q Consensus 358 ~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imL 414 (577)
..+++.|+..|.|.+.-+. |.. ++..|...|+|.+.+
T Consensus 94 ------~~v~~~~~~~g~~~i~G~~-----------t~~---e~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 94 ------EEVAALAQARGVPYLPGVL-----------TPT---EVERALALGLSALKF 130 (207)
T ss_dssp ------HHHHHHHHHHTCCEEEEEC-----------SHH---HHHHHHHTTCCEEEE
T ss_pred ------HHHHHHHHHhCCCEEecCC-----------CHH---HHHHHHHCCCCEEEE
Confidence 2678889999999875321 333 366788899999988
No 77
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=84.76 E-value=11 Score=36.24 Aligned_cols=104 Identities=13% Similarity=0.112 Sum_probs=68.2
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCCCccCCCCCC
Q 008112 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIE 357 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGDLg~elg~e 357 (577)
.+.++.+++.|++.|-+.+ +++...+.+++...+. .+..+-+-. .---+.++.-+++ +|++..+--|
T Consensus 31 ~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~~~vgagt--vi~~d~~~~A~~aGAd~v~~p~~d-------- 98 (214)
T 1wbh_A 31 VPMAKALVAGGVRVLNVTL-RTECAVDAIRAIAKEV-PEAIVGAGT--VLNPQQLAEVTEAGAQFAISPGLT-------- 98 (214)
T ss_dssp HHHHHHHHHTTCCEEEEES-CSTTHHHHHHHHHHHC-TTSEEEEES--CCSHHHHHHHHHHTCSCEEESSCC--------
T ss_pred HHHHHHHHHcCCCEEEEeC-CChhHHHHHHHHHHHC-cCCEEeeCE--EEEHHHHHHHHHcCCCEEEcCCCC--------
Confidence 4456777899999999996 4555555555444443 345554432 2122455555555 9999866322
Q ss_pred cHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEe
Q 008112 358 EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML 414 (577)
Q Consensus 358 ~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imL 414 (577)
..+++.|+..|.|.+.-+. |.. ++..|...|+|.+.+
T Consensus 99 ------~~v~~~~~~~g~~~i~G~~-----------t~~---e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 99 ------EPLLKAATEGTIPLIPGIS-----------TVS---ELMLGMDYGLKEFKF 135 (214)
T ss_dssp ------HHHHHHHHHSSSCEEEEES-----------SHH---HHHHHHHTTCCEEEE
T ss_pred ------HHHHHHHHHhCCCEEEecC-----------CHH---HHHHHHHCCCCEEEE
Confidence 3688999999999875322 333 367888999999998
No 78
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=84.56 E-value=8.2 Score=38.31 Aligned_cols=127 Identities=13% Similarity=0.112 Sum_probs=77.7
Q ss_pred CccCHHH-HHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhH----------hhHHHHHHh-cCE
Q 008112 275 TEKDWDD-IKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSI----------PNLHSIITA-SDG 342 (577)
Q Consensus 275 tekD~~d-I~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv----------~NldeIl~~-sDG 342 (577)
+..|.+. ++.+++.|++.|+++ +.-+.... ..+..++.++++..++ ...++.++. +|+
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~----~~~v~~~~------~~~~~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~~Ga~~ 108 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQ----RGIAEKYY------DGSVPLILKLNGKTTLYNGEPVSVANCSVEEAVSLGASA 108 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEEC----HHHHHHHC------CSSSCEEEECEECCTTCCSSCCCEESSCHHHHHHTTCSE
T ss_pred chhhHHHHHHHHHhhCCCEEEEC----HHHHHHhh------cCCCcEEEEEeCCCCcCCCCccchHHHHHHHHHHCCCCE
Confidence 5566444 467889999999987 33333332 3457788888776655 456666665 777
Q ss_pred EEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhh-hcCCCCChHhHHHH-HHHHHhccceEEec
Q 008112 343 AMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESM-IVHPTPTRAEVSDI-AIAVREGADAVMLS 415 (577)
Q Consensus 343 ImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM-~~~~~PtrAEv~Dv-~nav~~G~D~imLs 415 (577)
|-+ |-+++ +-....+...-+++...|+++|.|+|+=+. +..- ..+ ..+..++... .-+...|+|.+=.+
T Consensus 109 v~~-~~nig-~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~-~~G~~~~~-~~s~~~i~~a~~~a~~~GAD~vkt~ 179 (263)
T 1w8s_A 109 VGY-TIYPG-SGFEWKMFEELARIKRDAVKFDLPLVVESF-PRGGKVVN-ETAPEIVAYAARIALELGADAMKIK 179 (263)
T ss_dssp EEE-EECTT-STTHHHHHHHHHHHHHHHHHHTCCEEEEEC-CCSTTCCC-TTCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred EEE-EEecC-CcCHHHHHHHHHHHHHHHHHcCCeEEEEee-CCCCcccc-CCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 654 33333 222335556667888999999999886211 1000 000 0055566654 44788999998887
No 79
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=84.39 E-value=6.3 Score=41.84 Aligned_cols=152 Identities=19% Similarity=0.255 Sum_probs=97.7
Q ss_pred HHHHHHhcCCCEEEEcCCCCHHHHHHHHH---HHHhcCCCceEEEeecC--hhhHhhHHHHHHhcCEEEEcCCCccCCCC
Q 008112 281 DIKFGVDNKVDFYAVSFVKDAQVVHELKN---YLKSCGADIHVIVKIES--ADSIPNLHSIITASDGAMVARGDLGAELP 355 (577)
Q Consensus 281 dI~~al~~gvD~I~~SfV~sa~dv~~lr~---~l~~~~~~i~IiaKIEt--~~gv~NldeIl~~sDGImIaRGDLg~elg 355 (577)
.|....+.|+|.|-++ |.+.++.+.+.+ .|...+.+++++|-|=- +.++..+++..+..|.+=|-||.+|-.
T Consensus 43 QI~~L~~aG~eiVRva-Vp~~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al~a~~~~a~~~dkiRINPGNig~~-- 119 (406)
T 4g9p_A 43 QVLELHRAGSEIVRLT-VNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGRG-- 119 (406)
T ss_dssp HHHHHHHHTCSEEEEE-CCSHHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHHHHCHHHHHHCSEEEECTTSSCST--
T ss_pred HHHHHHHcCCCEEEEe-cCCHHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHHHHHHHHHhHHhhcccCccccCcc--
Confidence 3455567899998887 677777766654 45567789999997743 447777788888899999999987631
Q ss_pred CCcHHHHHHHHHHHHHHcCCceEEEe-------hhhHhhh----cCCCCCh-------HhHHHH----HHHHHhcc--ce
Q 008112 356 IEEVPLLQEEIIRTCRSMGKAVIVAT-------NMLESMI----VHPTPTR-------AEVSDI----AIAVREGA--DA 411 (577)
Q Consensus 356 ~e~v~~~qk~Ii~~c~~aGKPvi~AT-------q~LeSM~----~~~~Ptr-------AEv~Dv----~nav~~G~--D~ 411 (577)
.+...--+.++++|+++|+|+=+-+ .+|+.+- ..|.|.- +-+.-. .-+...|+ |=
T Consensus 120 -~k~~e~~~~vv~~ak~~~~pIRIGVN~GSL~~~ll~k~~d~~~~~~~p~~~~~v~~eamVeSAl~~~~~~~~~~f~~~~ 198 (406)
T 4g9p_A 120 -RHKDEHFAEMIRIAMDLGKPVRIGANWGSLDPALLTELMDRNASRPEPKSAHEVVLEALVESAVRAYEAALEMGLGEDK 198 (406)
T ss_dssp -HHHHHHHHHHHHHHHHHTCCEEEEEEGGGCCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred -ccHHHHHHHHHHHHHHccCCceeccccccccHHHHHHhhcccccCCCccchhhhHHHHHHHHHHHHHHHHHHcCCChhh
Confidence 1233445689999999999974333 2333332 2345532 111111 11223455 56
Q ss_pred EEeccccCCCCCHHHHHHHHHHHHHHHh
Q 008112 412 VMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (577)
Q Consensus 412 imLs~ETa~G~yP~eaV~~m~~I~~~aE 439 (577)
+++|--.+ -+...|+.-+.++++.+
T Consensus 199 iviS~KaS---dv~~~i~aYr~la~~~d 223 (406)
T 4g9p_A 199 LVLSAKVS---KARDLVWVYRELARRTQ 223 (406)
T ss_dssp EEEEEECS---SHHHHHHHHHHHHHHCC
T ss_pred eEEEeecC---CHHHHHHHHHHHHHhCC
Confidence 88875444 47777777777766543
No 80
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=84.24 E-value=26 Score=34.12 Aligned_cols=137 Identities=12% Similarity=0.046 Sum_probs=78.8
Q ss_pred HHHHHHHHhcCCCEE--EE-cCCCCH----HHHHHHHHHHHhcCCCceEEEeecChhh--------HhhHHHHHHh----
Q 008112 279 WDDIKFGVDNKVDFY--AV-SFVKDA----QVVHELKNYLKSCGADIHVIVKIESADS--------IPNLHSIITA---- 339 (577)
Q Consensus 279 ~~dI~~al~~gvD~I--~~-SfV~sa----~dv~~lr~~l~~~~~~i~IiaKIEt~~g--------v~NldeIl~~---- 339 (577)
.+.++.+++.|+|+| .+ ....+. +++.++.+.+++.| ++++..+- +.| .+++++.+..
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g--~~viv~~~-~~G~~l~~~~~~~~~~~~a~~a~~~ 178 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWG--MPLIAMMY-PRGKHIQNERDPELVAHAARLGAEL 178 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHT--CCEEEEEE-ECSTTCSCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcC--CCEEEEeC-CCCcccCCCCCHhHHHHHHHHHHHc
Confidence 456778899999999 32 222222 24556666665544 44555440 111 1344443222
Q ss_pred -cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHH-HHHHHHhccceEEeccc
Q 008112 340 -SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSD-IAIAVREGADAVMLSGE 417 (577)
Q Consensus 340 -sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~D-v~nav~~G~D~imLs~E 417 (577)
+|.|-++.+ .+ +. .+-+.+...+.|++..-.+= .++..+... +..++..|+|+++....
T Consensus 179 Gad~i~~~~~-----~~---~~----~l~~i~~~~~ipvva~GGi~-------~~~~~~~~~~~~~~~~~Ga~gv~vg~~ 239 (273)
T 2qjg_A 179 GADIVKTSYT-----GD---ID----SFRDVVKGCPAPVVVAGGPK-------TNTDEEFLQMIKDAMEAGAAGVAVGRN 239 (273)
T ss_dssp TCSEEEECCC-----SS---HH----HHHHHHHHCSSCEEEECCSC-------CSSHHHHHHHHHHHHHHTCSEEECCHH
T ss_pred CCCEEEECCC-----CC---HH----HHHHHHHhCCCCEEEEeCCC-------CCCHHHHHHHHHHHHHcCCcEEEeeHH
Confidence 898888731 12 21 12223344578988653321 112333322 66677899999998766
Q ss_pred cCCCCCHHHHHHHHHHHHHH
Q 008112 418 TAHGKFPLKAVKVMHTVSLR 437 (577)
Q Consensus 418 Ta~G~yP~eaV~~m~~I~~~ 437 (577)
-.....|.++++.+..+.++
T Consensus 240 i~~~~~~~~~~~~l~~~~~~ 259 (273)
T 2qjg_A 240 IFQHDDVVGITRAVCKIVHE 259 (273)
T ss_dssp HHTSSSHHHHHHHHHHHHHH
T ss_pred hhCCCCHHHHHHHHHHHHhc
Confidence 66667899999888887764
No 81
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=84.23 E-value=13 Score=35.16 Aligned_cols=132 Identities=10% Similarity=0.000 Sum_probs=72.8
Q ss_pred HHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHH-hcCEEEEcCCCccCCCCCCcHHH
Q 008112 283 KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT-ASDGAMVARGDLGAELPIEEVPL 361 (577)
Q Consensus 283 ~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~-~sDGImIaRGDLg~elg~e~v~~ 361 (577)
..+.+.|+|+|-+..-. ..+..+++.. . ...+.+-+.|.+- +.+... -+|.|+++..--+...+- ..+.
T Consensus 82 ~~a~~~gad~v~l~~~~--~~~~~~~~~~---~-~~~ig~sv~t~~~---~~~a~~~gaD~i~~~~~f~~~~~~g-~~~~ 151 (221)
T 1yad_A 82 DIALFSTIHRVQLPSGS--FSPKQIRARF---P-HLHIGRSVHSLEE---AVQAEKEDADYVLFGHVFETDCKKG-LEGR 151 (221)
T ss_dssp HHHHTTTCCEEEECTTS--CCHHHHHHHC---T-TCEEEEEECSHHH---HHHHHHTTCSEEEEECCC-----------C
T ss_pred HHHHHcCCCEEEeCCCc--cCHHHHHHHC---C-CCEEEEEcCCHHH---HHHHHhCCCCEEEECCccccCCCCC-CCCC
Confidence 55778999999887532 2345555543 1 4445555544332 222222 389999986311111100 0011
Q ss_pred HHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHH
Q 008112 362 LQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLR 437 (577)
Q Consensus 362 ~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~ 437 (577)
-.+.+-+.++..++|++.+-.+ +. .++..++..|+|++.+++--...+-|.++++.+.+.+++
T Consensus 152 ~~~~l~~~~~~~~~pvia~GGI----------~~---~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~ 214 (221)
T 1yad_A 152 GVSLLSDIKQRISIPVIAIGGM----------TP---DRLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSRKLKE 214 (221)
T ss_dssp HHHHHHHHHHHCCSCEEEESSC----------CG---GGHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCEEEECCC----------CH---HHHHHHHHcCCCEEEEhHHhhCCCCHHHHHHHHHHHHHH
Confidence 1223333344558998876442 33 346677778999999875443345588888887766554
No 82
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=84.14 E-value=4.4 Score=41.61 Aligned_cols=121 Identities=16% Similarity=0.247 Sum_probs=67.1
Q ss_pred ccCHHHHHHHHhcC--CCEEEEcCCC-CHHHHHHHHHHHHhcCCCceEEEe-ecChhhHhhHHHHHHh-cCEEEEcC--C
Q 008112 276 EKDWDDIKFGVDNK--VDFYAVSFVK-DAQVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITA-SDGAMVAR--G 348 (577)
Q Consensus 276 ekD~~dI~~al~~g--vD~I~~SfV~-sa~dv~~lr~~l~~~~~~i~IiaK-IEt~~gv~NldeIl~~-sDGImIaR--G 348 (577)
+.+.+.++...+.| +|+|.+..-. +.....+..+.+.+.-..+.++.. +-+. +......+. +|+|.++- |
T Consensus 105 ~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~---e~A~~a~~aGad~Ivvs~hgG 181 (336)
T 1ypf_A 105 EDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGNVGTP---EAVRELENAGADATKVGIGPG 181 (336)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEEEECSH---HHHHHHHHHTCSEEEECSSCS
T ss_pred HHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEECCcCCH---HHHHHHHHcCCCEEEEecCCC
Confidence 34556677778888 9998764321 222222222223222234566654 5443 445555555 99999941 1
Q ss_pred C-------ccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 349 D-------LGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 349 D-------Lg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
= .+...| .+ ....+.+.+++.++|+|.+..+- .-.|+..++..|+|++|+.
T Consensus 182 ~~~~~~~~~~~g~~--g~--~~~~l~~v~~~~~ipVIa~GGI~------------~g~Dv~kalalGAdaV~iG 239 (336)
T 1ypf_A 182 KVCITKIKTGFGTG--GW--QLAALRWCAKAASKPIIADGGIR------------TNGDVAKSIRFGATMVMIG 239 (336)
T ss_dssp TTCHHHHHHSCSST--TC--HHHHHHHHHHTCSSCEEEESCCC------------STHHHHHHHHTTCSEEEES
T ss_pred ceeecccccCcCCc--hh--HHHHHHHHHHHcCCcEEEeCCCC------------CHHHHHHHHHcCCCEEEeC
Confidence 0 111111 00 12234444555589999765543 2367999999999999984
No 83
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=83.85 E-value=9.1 Score=38.34 Aligned_cols=132 Identities=17% Similarity=0.160 Sum_probs=80.9
Q ss_pred CHHHHHHHHhcCCCEEEE-cCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCCCccC-CC
Q 008112 278 DWDDIKFGVDNKVDFYAV-SFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGA-EL 354 (577)
Q Consensus 278 D~~dI~~al~~gvD~I~~-SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGDLg~-el 354 (577)
|...+..+...|+|+|.+ .-.-+.+++.++.++..+.|. .+++-+-|.+-++ ..++. +|.|-+..-||.. +.
T Consensus 124 d~~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl--~~lvev~t~ee~~---~A~~~Gad~IGv~~r~l~~~~~ 198 (272)
T 3qja_A 124 QPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGM--TALVEVHTEQEAD---RALKAGAKVIGVNARDLMTLDV 198 (272)
T ss_dssp SHHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTTC--EEEEEESSHHHHH---HHHHHTCSEEEEESBCTTTCCB
T ss_pred CHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCCC--cEEEEcCCHHHHH---HHHHCCCCEEEECCCccccccc
Confidence 334577888999999988 233456778888888776544 4555554543333 22333 8999998767633 23
Q ss_pred CCCcHHHHHHHHHHHHHHc--CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHH
Q 008112 355 PIEEVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 432 (577)
Q Consensus 355 g~e~v~~~qk~Ii~~c~~a--GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~ 432 (577)
+++.+. ++ +... ++|++... ..-|. .|+..+...|+|++....---....|-++++.+.
T Consensus 199 dl~~~~----~l---~~~v~~~~pvVaeg---------GI~t~---edv~~l~~~GadgvlVGsal~~a~dp~~~~~~l~ 259 (272)
T 3qja_A 199 DRDCFA----RI---APGLPSSVIRIAES---------GVRGT---ADLLAYAGAGADAVLVGEGLVTSGDPRAAVADLV 259 (272)
T ss_dssp CTTHHH----HH---GGGSCTTSEEEEES---------CCCSH---HHHHHHHHTTCSEEEECHHHHTCSCHHHHHHHHH
T ss_pred CHHHHH----HH---HHhCcccCEEEEEC---------CCCCH---HHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHH
Confidence 333322 22 2222 67877533 23344 4577778889999998543334457888887765
Q ss_pred H
Q 008112 433 T 433 (577)
Q Consensus 433 ~ 433 (577)
.
T Consensus 260 ~ 260 (272)
T 3qja_A 260 T 260 (272)
T ss_dssp T
T ss_pred h
Confidence 3
No 84
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=83.61 E-value=12 Score=36.30 Aligned_cols=116 Identities=9% Similarity=0.086 Sum_probs=73.5
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCCCccCCCCCC
Q 008112 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIE 357 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGDLg~elg~e 357 (577)
.+.++.+++.|++.|=+.+ ++....+.++....+. .++.+-+-. .---+.++.-+++ +|++..+--|
T Consensus 41 ~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~~~igagt--vl~~d~~~~A~~aGAd~v~~p~~d-------- 108 (225)
T 1mxs_A 41 LPLADALAAGGIRTLEVTL-RSQHGLKAIQVLREQR-PELCVGAGT--VLDRSMFAAVEAAGAQFVVTPGIT-------- 108 (225)
T ss_dssp HHHHHHHHHTTCCEEEEES-SSTHHHHHHHHHHHHC-TTSEEEEEC--CCSHHHHHHHHHHTCSSEECSSCC--------
T ss_pred HHHHHHHHHCCCCEEEEec-CCccHHHHHHHHHHhC-cccEEeeCe--EeeHHHHHHHHHCCCCEEEeCCCC--------
Confidence 4456677889999999996 4555555555444443 355555542 2222445544444 8999855222
Q ss_pred cHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHH---HHHHHH
Q 008112 358 EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAV---KVMHTV 434 (577)
Q Consensus 358 ~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV---~~m~~I 434 (577)
..+++.|+..|.|.+.-+ -|.. ++..|...|+|.+.+ ||.+.+ ++++.+
T Consensus 109 ------~~v~~~~~~~g~~~i~G~-----------~t~~---e~~~A~~~Gad~vk~--------FPa~~~~G~~~lk~i 160 (225)
T 1mxs_A 109 ------EDILEAGVDSEIPLLPGI-----------STPS---EIMMGYALGYRRFKL--------FPAEISGGVAAIKAF 160 (225)
T ss_dssp ------HHHHHHHHHCSSCEECEE-----------CSHH---HHHHHHTTTCCEEEE--------TTHHHHTHHHHHHHH
T ss_pred ------HHHHHHHHHhCCCEEEee-----------CCHH---HHHHHHHCCCCEEEE--------ccCccccCHHHHHHH
Confidence 368899999999987432 1333 367888999999998 885543 444444
No 85
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=83.58 E-value=6.1 Score=40.23 Aligned_cols=160 Identities=9% Similarity=0.075 Sum_probs=94.9
Q ss_pred CCccCHHHHHH-HHhcCCCEEEEc-CCCC-----HHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEE
Q 008112 274 ITEKDWDDIKF-GVDNKVDFYAVS-FVKD-----AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMV 345 (577)
Q Consensus 274 ltekD~~dI~~-al~~gvD~I~~S-fV~s-----a~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImI 345 (577)
++..|+..|.. ..+.|+|.|=+. |+.. ..|..++.+.+... .++.+.+.+.+.. +++..++. .|.|.|
T Consensus 25 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~l~~~~~---~i~~a~~~g~~~v~i 100 (307)
T 1ydo_A 25 IATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDRE-KGVTYAALVPNQR---GLENALEGGINEACV 100 (307)
T ss_dssp CCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-TTCEEEEECCSHH---HHHHHHHHTCSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhc-CCCeEEEEeCCHH---hHHHHHhCCcCEEEE
Confidence 45566655544 456899998775 4332 13444554444332 4566666664443 44444443 675443
Q ss_pred --cCCCc----cCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhccceEEecccc
Q 008112 346 --ARGDL----GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSGET 418 (577)
Q Consensus 346 --aRGDL----g~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~D~imLs~ET 418 (577)
+--|+ -.....++.....+++++.++++|+.|-..--+--+......-+...+.+++. +...|+|.|.|. +|
T Consensus 101 ~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~-DT 179 (307)
T 1ydo_A 101 FMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLG-DT 179 (307)
T ss_dssp EEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEEEE-CS
T ss_pred EeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEEc-CC
Confidence 33332 12234445666778899999999999853211100000111335566666666 567899999996 88
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q 008112 419 AHGKFPLKAVKVMHTVSLRT 438 (577)
Q Consensus 419 a~G~yP~eaV~~m~~I~~~a 438 (577)
.=.-.|.+.-+.+..+.+..
T Consensus 180 ~G~~~P~~v~~lv~~l~~~~ 199 (307)
T 1ydo_A 180 IGAANPAQVETVLEALLARF 199 (307)
T ss_dssp SCCCCHHHHHHHHHHHHTTS
T ss_pred CCCcCHHHHHHHHHHHHHhC
Confidence 88889999888888876544
No 86
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=83.41 E-value=11 Score=35.96 Aligned_cols=137 Identities=16% Similarity=0.186 Sum_probs=75.8
Q ss_pred HHHHHHHhcCCCEEEEcCC--CCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEc---CCCccCCC
Q 008112 280 DDIKFGVDNKVDFYAVSFV--KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVA---RGDLGAEL 354 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV--~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIa---RGDLg~el 354 (577)
+.++.+.+.|+|+|.+..- .+ ++..++.+.+.+.| ..++.-+-+..-.+.+.++...+|.|++. +|--|...
T Consensus 82 ~~v~~~~~~Gad~v~vh~~~~~~-~~~~~~~~~~~~~g--~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~pg~~g~~~ 158 (230)
T 1rpx_A 82 QRVPDFIKAGADIVSVHCEQSST-IHLHRTINQIKSLG--AKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFGGQSF 158 (230)
T ss_dssp HHHHHHHHTTCSEEEEECSTTTC-SCHHHHHHHHHHTT--SEEEEEECTTCCGGGGTTTTTTCSEEEEESSCTTCSSCCC
T ss_pred HHHHHHHHcCCCEEEEEecCccc-hhHHHHHHHHHHcC--CcEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcCCCCCccc
Confidence 4677778899999987765 44 44455556665544 33444442222334555556668977433 34223333
Q ss_pred CCCcHHHHHHHHHHHHHHc--CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHH
Q 008112 355 PIEEVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 432 (577)
Q Consensus 355 g~e~v~~~qk~Ii~~c~~a--GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~ 432 (577)
....+ .-.+++-+.+... ..|+++.-. + .|. .+..++..|+|++.+++--...+-|.++++.+.
T Consensus 159 ~~~~~-~~i~~l~~~~~~~~~~~pi~v~GG-I-------~~~-----n~~~~~~aGad~vvvgSaI~~a~dp~~a~~~l~ 224 (230)
T 1rpx_A 159 IESQV-KKISDLRKICAERGLNPWIEVDGG-V-------GPK-----NAYKVIEAGANALVAGSAVFGAPDYAEAIKGIK 224 (230)
T ss_dssp CTTHH-HHHHHHHHHHHHHTCCCEEEEESS-C-------CTT-----THHHHHHHTCCEEEESHHHHTSSCHHHHHHHHH
T ss_pred cHHHH-HHHHHHHHHHHhcCCCceEEEECC-C-------CHH-----HHHHHHHcCCCEEEEChhhhCCCCHHHHHHHHH
Confidence 32222 2222333333222 577665432 2 232 355566779999998755444556888888775
Q ss_pred H
Q 008112 433 T 433 (577)
Q Consensus 433 ~ 433 (577)
+
T Consensus 225 ~ 225 (230)
T 1rpx_A 225 T 225 (230)
T ss_dssp T
T ss_pred H
Confidence 3
No 87
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=83.16 E-value=4.4 Score=40.62 Aligned_cols=91 Identities=21% Similarity=0.328 Sum_probs=55.6
Q ss_pred CHHHHHHHHhcCCCEE--EEcC---------CCCHH-----------HHHHHHHHHHhcCCCceEEEeec-Ch---hhHh
Q 008112 278 DWDDIKFGVDNKVDFY--AVSF---------VKDAQ-----------VVHELKNYLKSCGADIHVIVKIE-SA---DSIP 331 (577)
Q Consensus 278 D~~dI~~al~~gvD~I--~~Sf---------V~sa~-----------dv~~lr~~l~~~~~~i~IiaKIE-t~---~gv~ 331 (577)
-.+.++...+.|+|+| .+|| ++++. ++-++.+.+++.+.+++++.+.- ++ -|++
T Consensus 34 ~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e 113 (267)
T 3vnd_A 34 SLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGID 113 (267)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHH
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHH
Confidence 3455566667899985 5666 44433 33333333444345677888754 43 3556
Q ss_pred hHHH-HHHh-cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceE
Q 008112 332 NLHS-IITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVI 378 (577)
Q Consensus 332 Nlde-Il~~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi 378 (577)
++-+ ..++ +||+++. | +|+++ ..+.+..|+++|...+
T Consensus 114 ~f~~~~~~aGvdgvii~--D----lp~ee----~~~~~~~~~~~gl~~i 152 (267)
T 3vnd_A 114 EFYTKAQAAGVDSVLIA--D----VPVEE----SAPFSKAAKAHGIAPI 152 (267)
T ss_dssp HHHHHHHHHTCCEEEET--T----SCGGG----CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHcCCCEEEeC--C----CCHhh----HHHHHHHHHHcCCeEE
Confidence 5533 3344 9999995 4 45554 4668889999998765
No 88
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=83.08 E-value=11 Score=36.57 Aligned_cols=104 Identities=12% Similarity=0.159 Sum_probs=68.6
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCCCccCCCCCC
Q 008112 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIE 357 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGDLg~elg~e 357 (577)
.+.++.+++.|++.|-+.+ ++....+.++++..+. .++.+-+-. .---+.++.-+++ +|+++.+-.|
T Consensus 32 ~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~l~vgaGt--vl~~d~~~~A~~aGAd~v~~p~~d-------- 99 (224)
T 1vhc_A 32 LPLADTLAKNGLSVAEITF-RSEAAADAIRLLRANR-PDFLIAAGT--VLTAEQVVLAKSSGADFVVTPGLN-------- 99 (224)
T ss_dssp HHHHHHHHHTTCCEEEEET-TSTTHHHHHHHHHHHC-TTCEEEEES--CCSHHHHHHHHHHTCSEEECSSCC--------
T ss_pred HHHHHHHHHcCCCEEEEec-cCchHHHHHHHHHHhC-cCcEEeeCc--EeeHHHHHHHHHCCCCEEEECCCC--------
Confidence 4455777899999999996 5555666665555444 345554432 2222455555555 9999765333
Q ss_pred cHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEe
Q 008112 358 EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML 414 (577)
Q Consensus 358 ~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imL 414 (577)
..+++.|++.|+|++.-+ -|..| +..|...|+|.+.+
T Consensus 100 ------~~v~~~ar~~g~~~i~Gv-----------~t~~e---~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 100 ------PKIVKLCQDLNFPITPGV-----------NNPMA---IEIALEMGISAVKF 136 (224)
T ss_dssp ------HHHHHHHHHTTCCEECEE-----------CSHHH---HHHHHHTTCCEEEE
T ss_pred ------HHHHHHHHHhCCCEEecc-----------CCHHH---HHHHHHCCCCEEEE
Confidence 457789999999987532 23333 66788999999998
No 89
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=82.87 E-value=2.8 Score=42.27 Aligned_cols=160 Identities=13% Similarity=0.101 Sum_probs=93.4
Q ss_pred CCccCHHHH-HHHHhcCCCEEEEc-CCCC-----HHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEE
Q 008112 274 ITEKDWDDI-KFGVDNKVDFYAVS-FVKD-----AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMV 345 (577)
Q Consensus 274 ltekD~~dI-~~al~~gvD~I~~S-fV~s-----a~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImI 345 (577)
++..++..| +...+.|+|.|=+. |+.. ..|..++.+.+... .++.+.+.+.+. +.++..++. .|.|.|
T Consensus 24 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~l~~~~---~~i~~a~~ag~~~v~i 99 (298)
T 2cw6_A 24 VSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKF-PGINYPVLTPNL---KGFEAAVAAGAKEVVI 99 (298)
T ss_dssp CCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCC-TTCBCCEECCSH---HHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhC-CCCEEEEEcCCH---HhHHHHHHCCCCEEEE
Confidence 445555444 45567899998664 3332 13555555555432 234444444443 344444444 675544
Q ss_pred --cCCCc----cCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhccceEEecccc
Q 008112 346 --ARGDL----GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSGET 418 (577)
Q Consensus 346 --aRGDL----g~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~D~imLs~ET 418 (577)
+--|. -.....++....-++.++.|+++|+++-+..-+--+......-+..++.+++. +...|+|.+.|. +|
T Consensus 100 ~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~-DT 178 (298)
T 2cw6_A 100 FGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLG-DT 178 (298)
T ss_dssp EEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEE-ET
T ss_pred EecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEec-CC
Confidence 32222 01233445566667889999999999864321110100111234556666665 567899999996 78
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q 008112 419 AHGKFPLKAVKVMHTVSLRT 438 (577)
Q Consensus 419 a~G~yP~eaV~~m~~I~~~a 438 (577)
.=.-.|.+.-+.+..+.+..
T Consensus 179 ~G~~~P~~~~~lv~~l~~~~ 198 (298)
T 2cw6_A 179 IGVGTPGIMKDMLSAVMQEV 198 (298)
T ss_dssp TSCCCHHHHHHHHHHHHHHS
T ss_pred CCCcCHHHHHHHHHHHHHhC
Confidence 77788999999988887765
No 90
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=82.68 E-value=15 Score=36.85 Aligned_cols=128 Identities=11% Similarity=0.108 Sum_probs=77.9
Q ss_pred HHHHHHHhcCCCEEEEcC-CCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh----cCEEEEcCCCccC-C
Q 008112 280 DDIKFGVDNKVDFYAVSF-VKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA----SDGAMVARGDLGA-E 353 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~Sf-V~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~----sDGImIaRGDLg~-e 353 (577)
..+..+...|+|.|.+-- ..+.+++.++.++..+.| +.+++-+- |.+|+..+ +|.|-+..-||.. +
T Consensus 133 ~qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lG--l~~lvevh------~~eEl~~A~~~ga~iIGinnr~l~t~~ 204 (272)
T 3tsm_A 133 YQVYEARSWGADCILIIMASVDDDLAKELEDTAFALG--MDALIEVH------DEAEMERALKLSSRLLGVNNRNLRSFE 204 (272)
T ss_dssp HHHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTT--CEEEEEEC------SHHHHHHHTTSCCSEEEEECBCTTTCC
T ss_pred HHHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcC--CeEEEEeC------CHHHHHHHHhcCCCEEEECCCCCccCC
Confidence 357788899999976653 446778888888887764 44555443 44444332 7888777556632 2
Q ss_pred CCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHH
Q 008112 354 LPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 432 (577)
Q Consensus 354 lg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~ 432 (577)
..++... +++... ..++|++. ....-|++ |+..+...|+|+++...---....|.++++-|.
T Consensus 205 ~dl~~~~----~L~~~i-p~~~~vIa---------esGI~t~e---dv~~l~~~Ga~gvLVG~almr~~d~~~~~~~l~ 266 (272)
T 3tsm_A 205 VNLAVSE----RLAKMA-PSDRLLVG---------ESGIFTHE---DCLRLEKSGIGTFLIGESLMRQHDVAAATRALL 266 (272)
T ss_dssp BCTHHHH----HHHHHS-CTTSEEEE---------ESSCCSHH---HHHHHHTTTCCEEEECHHHHTSSCHHHHHHHHH
T ss_pred CChHHHH----HHHHhC-CCCCcEEE---------ECCCCCHH---HHHHHHHcCCCEEEEcHHHcCCcCHHHHHHHHH
Confidence 2222222 222221 12677775 33444554 466778899999998544445567888777654
No 91
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=82.43 E-value=11 Score=39.76 Aligned_cols=112 Identities=13% Similarity=0.110 Sum_probs=80.0
Q ss_pred HHHHHHHhcCCCEEEEcCC-----------CCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEcCC
Q 008112 280 DDIKFGVDNKVDFYAVSFV-----------KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARG 348 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV-----------~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIaRG 348 (577)
+.++.+.+.|+|+|...-- -..+.+..++++..+. .+.+++-+-..+.++-+. +.+|.+-||-+
T Consensus 160 ~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~--Gl~~~te~~d~~~~~~l~---~~vd~lkIgs~ 234 (385)
T 3nvt_A 160 AVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEY--GLGVISEIVTPADIEVAL---DYVDVIQIGAR 234 (385)
T ss_dssp HHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECCSGGGHHHHT---TTCSEEEECGG
T ss_pred HHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHc--CCEEEEecCCHHHHHHHH---hhCCEEEECcc
Confidence 3445566789998855421 1257888888887664 578888887777666554 45999999977
Q ss_pred CccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHh-ccceEEec
Q 008112 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVRE-GADAVMLS 415 (577)
Q Consensus 349 DLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~-G~D~imLs 415 (577)
++.- ..+++++.+.||||++.|.|. .|..|+..++..+.. |.+-++|.
T Consensus 235 ~~~n-----------~~LL~~~a~~gkPVilk~G~~--------~t~~e~~~Ave~i~~~Gn~~i~L~ 283 (385)
T 3nvt_A 235 NMQN-----------FELLKAAGRVDKPILLKRGLS--------ATIEEFIGAAEYIMSQGNGKIILC 283 (385)
T ss_dssp GTTC-----------HHHHHHHHTSSSCEEEECCTT--------CCHHHHHHHHHHHHTTTCCCEEEE
T ss_pred cccC-----------HHHHHHHHccCCcEEEecCCC--------CCHHHHHHHHHHHHHcCCCeEEEE
Confidence 6632 256677788999999987763 578899888888764 77656664
No 92
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=82.08 E-value=8.1 Score=40.35 Aligned_cols=113 Identities=19% Similarity=0.306 Sum_probs=62.2
Q ss_pred HHHHHhcCCCEEEEc-------CCC---CHHHHHHHHHHHHhcCCCceEEEe-ecChhhHhhHHHHHHh-cCEEEEcCCC
Q 008112 282 IKFGVDNKVDFYAVS-------FVK---DAQVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITA-SDGAMVARGD 349 (577)
Q Consensus 282 I~~al~~gvD~I~~S-------fV~---sa~dv~~lr~~l~~~~~~i~IiaK-IEt~~gv~NldeIl~~-sDGImIaRGD 349 (577)
.+...+.|+|++.+. ++. +.+++.++++.. +++++++ |-|++ ......+. +|+|++++|-
T Consensus 171 a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~-----~~pvi~ggi~t~e---~a~~~~~~Gad~i~vg~Gg 242 (393)
T 2qr6_A 171 APIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSL-----DVPVIAGGVNDYT---TALHMMRTGAVGIIVGGGE 242 (393)
T ss_dssp HHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHC-----SSCEEEECCCSHH---HHHHHHTTTCSEEEESCCS
T ss_pred HHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhc-----CCCEEECCcCCHH---HHHHHHHcCCCEEEECCCc
Confidence 344457899998764 222 335555555432 5777775 33333 33333334 9999998753
Q ss_pred ccC----CCCCCcHHHHHHHHHHHH----HHcC---CceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 350 LGA----ELPIEEVPLLQEEIIRTC----RSMG---KAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 350 Lg~----elg~e~v~~~qk~Ii~~c----~~aG---KPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
-+. ..+.. ......++.+.+ .+.+ +|+|.+..+- .-.|+..++..|+|++++.
T Consensus 243 ~~~~~~~~~g~~-~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~------------~~~dv~kalalGA~~V~iG 306 (393)
T 2qr6_A 243 NTNSLALGMEVS-MATAIADVAAARRDYLDETGGRYVHIIADGSIE------------NSGDVVKAIACGADAVVLG 306 (393)
T ss_dssp CCHHHHTSCCCC-HHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCC------------SHHHHHHHHHHTCSEEEEC
T ss_pred ccccccCCCCCC-hHHHHHHHHHHHHHhHhhcCCcceEEEEECCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 211 11121 122222333332 2244 8888754432 2368999999999999985
No 93
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=81.94 E-value=23 Score=33.91 Aligned_cols=120 Identities=17% Similarity=0.151 Sum_probs=70.0
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCE-EEE-cC-CCccCCCC
Q 008112 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDG-AMV-AR-GDLGAELP 355 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDG-ImI-aR-GDLg~elg 355 (577)
.++++.+++.|+|+|.++.. ..++..++.+++++.|.+. +.-+......+.+..+...+|+ +.+ .+ |-.|..-+
T Consensus 98 ~~~~~~~~~~Gad~v~~~~~-~~~~~~~~~~~~~~~g~~~--~~~i~~~t~~e~~~~~~~~~d~~i~~~~~~G~~g~~~~ 174 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVDL-PVFHAKEFTEIAREEGIKT--VFLAAPNTPDERLKVIDDMTTGFVYLVSLYGTTGAREE 174 (248)
T ss_dssp HHHHHHHHHHTCCEEEETTC-CGGGHHHHHHHHHHHTCEE--EEEECTTCCHHHHHHHHHHCSSEEEEECCC-------C
T ss_pred HHHHHHHHHCCCCEEEECCC-ChhhHHHHHHHHHHhCCCe--EEEECCCCHHHHHHHHHhcCCCeEEEEECCccCCCCCC
Confidence 35778889999999999854 4567888888887776543 4444433345667777777884 322 22 22222211
Q ss_pred CCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 356 IEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 356 ~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
. -+...+.+-+.++..+.|++....+ -+ ..++..+...|+|++.+.
T Consensus 175 ~--~~~~~~~i~~l~~~~~~pi~~~GGI---------~~---~e~i~~~~~~Gad~vivG 220 (248)
T 1geq_A 175 I--PKTAYDLLRRAKRICRNKVAVGFGV---------SK---REHVVSLLKEGANGVVVG 220 (248)
T ss_dssp C--CHHHHHHHHHHHHHCSSCEEEESCC---------CS---HHHHHHHHHTTCSEEEEC
T ss_pred C--ChhHHHHHHHHHhhcCCCEEEEeec---------CC---HHHHHHHHHcCCCEEEEc
Confidence 1 1222333333334447898765432 12 245666777899999975
No 94
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=81.58 E-value=4.6 Score=39.74 Aligned_cols=37 Identities=16% Similarity=0.426 Sum_probs=28.0
Q ss_pred HHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEe
Q 008112 364 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML 414 (577)
Q Consensus 364 k~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imL 414 (577)
..+++.|+++|.|++--. -|. +++..|...|+|.+-+
T Consensus 117 ~~vi~~~~~~gi~~ipGv-----------~Tp---tEi~~A~~~Gad~vK~ 153 (232)
T 4e38_A 117 PNTVRACQEIGIDIVPGV-----------NNP---STVEAALEMGLTTLKF 153 (232)
T ss_dssp HHHHHHHHHHTCEEECEE-----------CSH---HHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHcCCCEEcCC-----------CCH---HHHHHHHHcCCCEEEE
Confidence 578889999999985211 133 4477899999999987
No 95
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=81.50 E-value=3.1 Score=39.81 Aligned_cols=139 Identities=11% Similarity=0.076 Sum_probs=76.7
Q ss_pred HHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceE-EEeecChhhHhhHHHHHH-hcCEEEEcCCCccCCCCCCc
Q 008112 281 DIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHV-IVKIESADSIPNLHSIIT-ASDGAMVARGDLGAELPIEE 358 (577)
Q Consensus 281 dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~I-iaKIEt~~gv~NldeIl~-~sDGImIaRGDLg~elg~e~ 358 (577)
.++.+.+.|+|+|.++-....+.++++.+.+++.|....+ +...-|. +.+.++.+ -.|.+.+..|-.+-.-|..-
T Consensus 75 ~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~d~l~~~T~---~~~~~~~~~g~d~v~~~~~~~~~~~g~~~ 151 (218)
T 3jr2_A 75 LSRMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIYGNWTM---QDAKAWVDLGITQAIYHRSRDAELAGIGW 151 (218)
T ss_dssp HHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECCSSCCH---HHHHHHHHTTCCEEEEECCHHHHHHTCCS
T ss_pred HHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccceeeeecCCH---HHHHHHHHcCccceeeeeccccccCCCcC
Confidence 4466788999999998776666788888888776654443 3334464 34444544 37876654332111001111
Q ss_pred HHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHH
Q 008112 359 VPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLR 437 (577)
Q Consensus 359 v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~ 437 (577)
.+..-++|-+ .+....|+.+.-. . .|.. +..++..|+|++...+--....-|.+++ .+.+..++
T Consensus 152 ~~~~l~~i~~-~~~~~~pi~v~GG-I-------~~~~-----~~~~~~aGAd~vvvGsaI~~a~dp~~a~-~l~~~~~~ 215 (218)
T 3jr2_A 152 TTDDLDKMRQ-LSALGIELSITGG-I-------VPED-----IYLFEGIKTKTFIAGRALAGAEGQQTAA-ALREQIDR 215 (218)
T ss_dssp CHHHHHHHHH-HHHTTCEEEEESS-C-------CGGG-----GGGGTTSCEEEEEESGGGSHHHHHHHHH-HHHHHHHH
T ss_pred CHHHHHHHHH-HhCCCCCEEEECC-C-------CHHH-----HHHHHHcCCCEEEEchhhcCCCCHHHHH-HHHHHHHh
Confidence 1222222222 2234677665322 1 1222 3357888999999864333334578877 66665543
No 96
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=80.62 E-value=13 Score=36.54 Aligned_cols=141 Identities=17% Similarity=0.116 Sum_probs=87.3
Q ss_pred CCCCccCHHHH-HHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHH-------HHh-cCE
Q 008112 272 PSITEKDWDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSI-------ITA-SDG 342 (577)
Q Consensus 272 p~ltekD~~dI-~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeI-------l~~-sDG 342 (577)
|.-|..|.+.+ ..+.+.|++.|+++ +..+ ..++++.... .+++.+-+=-+.|-.+.+.. ++. +|.
T Consensus 31 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v-~a~~~l~~~~-~v~v~tvigFP~G~~~~~~k~~e~~~Av~~GAdE 104 (234)
T 1n7k_A 31 PRATEEDVRNLVREASDYGFRCAVLT----PVYT-VKISGLAEKL-GVKLCSVIGFPLGQAPLEVKLVEAQTVLEAGATE 104 (234)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----HHHH-HHHHHHHHHH-TCCEEEEESTTTCCSCHHHHHHHHHHHHHHTCCE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEc----hHHh-eeehHhCCCC-CceEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 45566665443 56788999999875 5566 6677775431 46677766334433333222 222 665
Q ss_pred EEE--cCCCccCCCCCCcHHHHHHHHHHHHHHcCCce--EEEehhhHhhhcCCCCChHhHHHHHH-HHHhccceEEeccc
Q 008112 343 AMV--ARGDLGAELPIEEVPLLQEEIIRTCRSMGKAV--IVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSGE 417 (577)
Q Consensus 343 ImI--aRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPv--i~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~D~imLs~E 417 (577)
|=+ ..|.|- . .+..-.+.+.++|...|+|+ |+.|-.| +..|+..... +...|+|.|=-|
T Consensus 105 ID~vinig~~~---~--~v~~ei~~v~~a~~~~g~~lKvIlEt~~L---------~~e~i~~a~ria~eaGADfVKTs-- 168 (234)
T 1n7k_A 105 LDVVPHLSLGP---E--AVYREVSGIVKLAKSYGAVVKVILEAPLW---------DDKTLSLLVDSSRRAGADIVKTS-- 168 (234)
T ss_dssp EEECCCGGGCH---H--HHHHHHHHHHHHHHHTTCEEEEECCGGGS---------CHHHHHHHHHHHHHTTCSEEESC--
T ss_pred EEEeccchHHH---H--HHHHHHHHHHHHHhhcCCeEEEEEeccCC---------CHHHHHHHHHHHHHhCCCEEEeC--
Confidence 532 233321 1 45555567888898888997 6655433 5677766666 678899998765
Q ss_pred cCCCCCH-----HHHHHH--HHHHHH
Q 008112 418 TAHGKFP-----LKAVKV--MHTVSL 436 (577)
Q Consensus 418 Ta~G~yP-----~eaV~~--m~~I~~ 436 (577)
.|..| .+.|+. |++++.
T Consensus 169 --TG~~~~~gAt~~dv~l~~m~~~v~ 192 (234)
T 1n7k_A 169 --TGVYTKGGDPVTVFRLASLAKPLG 192 (234)
T ss_dssp --CSSSCCCCSHHHHHHHHHHHGGGT
T ss_pred --CCCCCCCCCCHHHHHHHHHHHHHC
Confidence 66665 788888 876654
No 97
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=80.57 E-value=16 Score=36.50 Aligned_cols=122 Identities=11% Similarity=0.007 Sum_probs=68.3
Q ss_pred HHHHHHHhcCCC-EEEEcCC-----------CCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-----cCE
Q 008112 280 DDIKFGVDNKVD-FYAVSFV-----------KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-----SDG 342 (577)
Q Consensus 280 ~dI~~al~~gvD-~I~~SfV-----------~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-----sDG 342 (577)
+..+.+.+.|+| +|-+.|- .+.+.+.++.+.+.+. .+++++.||=.--..+++.++++. +|+
T Consensus 110 ~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~-~~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~ 188 (311)
T 1jub_A 110 AMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTF-FTKPLGVKLPPYFDLVHFDIMAEILNQFPLTY 188 (311)
T ss_dssp HHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTT-CCSCEEEEECCCCSHHHHHHHHHHHTTSCCCE
T ss_pred HHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHh-cCCCEEEEECCCCCHHHHHHHHHHHHHcCCcE
Confidence 334555678999 9888652 2566666665555432 257899998422122344444433 788
Q ss_pred EEEcCCC---ccCC-------C----------CCCcHHHHHHHHHHHHHH-c--CCceEEEehhhHhhhcCCCCChHhHH
Q 008112 343 AMVARGD---LGAE-------L----------PIEEVPLLQEEIIRTCRS-M--GKAVIVATNMLESMIVHPTPTRAEVS 399 (577)
Q Consensus 343 ImIaRGD---Lg~e-------l----------g~e~v~~~qk~Ii~~c~~-a--GKPvi~ATq~LeSM~~~~~PtrAEv~ 399 (577)
|.+.-.- +.++ + +....+... +.++..++ . .+|+|....+- + ..
T Consensus 189 i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~-~~i~~v~~~~~~~ipvi~~GGI~---------~---~~ 255 (311)
T 1jub_A 189 VNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTAL-ANVRAFYTRLKPEIQIIGTGGIE---------T---GQ 255 (311)
T ss_dssp EEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHH-HHHHHHHTTSCTTSEEEEESSCC---------S---HH
T ss_pred EEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHH-HHHHHHHHhcCCCCCEEEECCCC---------C---HH
Confidence 8774210 0011 0 111123333 34444444 4 68888755432 2 35
Q ss_pred HHHHHHHhccceEEec
Q 008112 400 DIAIAVREGADAVMLS 415 (577)
Q Consensus 400 Dv~nav~~G~D~imLs 415 (577)
|+..++..|+|+|++.
T Consensus 256 da~~~l~~GAd~V~vg 271 (311)
T 1jub_A 256 DAFEHLLCGATMLQIG 271 (311)
T ss_dssp HHHHHHHHTCSEEEEC
T ss_pred HHHHHHHcCCCEEEEc
Confidence 6778888999999996
No 98
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=80.37 E-value=13 Score=38.87 Aligned_cols=97 Identities=14% Similarity=0.240 Sum_probs=65.8
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceE
Q 008112 300 DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVI 378 (577)
Q Consensus 300 sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi 378 (577)
+.++.++++++.++. .+.+++-.=..++ +|.+.+. +|.+=||-+|+ ..++ +++.+.+.|||+|
T Consensus 76 ~~e~~~~L~~~~~~~--Gi~~~st~fD~~s---vd~l~~~~v~~~KI~S~~~------~N~p-----LL~~va~~gKPvi 139 (350)
T 3g8r_A 76 QPEQMQKLVAEMKAN--GFKAICTPFDEES---VDLIEAHGIEIIKIASCSF------TDWP-----LLERIARSDKPVV 139 (350)
T ss_dssp CHHHHHHHHHHHHHT--TCEEEEEECSHHH---HHHHHHTTCCEEEECSSST------TCHH-----HHHHHHTSCSCEE
T ss_pred CHHHHHHHHHHHHHc--CCcEEeccCCHHH---HHHHHHcCCCEEEECcccc------cCHH-----HHHHHHhhCCcEE
Confidence 346677777777654 3556664444444 4444455 89999998776 3444 4455667899999
Q ss_pred EEehhhHhhhcCCCCChHhHHHHHHHHHh-ccceEEeccccCCCCCH
Q 008112 379 VATNMLESMIVHPTPTRAEVSDIAIAVRE-GADAVMLSGETAHGKFP 424 (577)
Q Consensus 379 ~ATq~LeSM~~~~~PtrAEv~Dv~nav~~-G~D~imLs~ETa~G~yP 424 (577)
+.|.|- |-.|+...++++.. |.+.++|-.++. ||
T Consensus 140 LstGms---------tl~Ei~~Ave~i~~~g~~viLlhC~s~---YP 174 (350)
T 3g8r_A 140 ASTAGA---------RREDIDKVVSFMLHRGKDLTIMHCVAE---YP 174 (350)
T ss_dssp EECTTC---------CHHHHHHHHHHHHTTTCCEEEEECCCC---SS
T ss_pred EECCCC---------CHHHHHHHHHHHHHcCCCEEEEecCCC---CC
Confidence 999863 78999999998875 677666655543 66
No 99
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=80.32 E-value=22 Score=38.21 Aligned_cols=118 Identities=21% Similarity=0.234 Sum_probs=72.2
Q ss_pred HHHHHHHHhcCCCEEEEcCC--CCHHHHHHHHHHHHhcCCCceEEEe-ecChhhHhhHHHHHHhcCEEEEcCCCccC---
Q 008112 279 WDDIKFGVDNKVDFYAVSFV--KDAQVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITASDGAMVARGDLGA--- 352 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV--~sa~dv~~lr~~l~~~~~~i~IiaK-IEt~~gv~NldeIl~~sDGImIaRGDLg~--- 352 (577)
.+.+.+.++.|+|.+.+.-. .+..-+..++. +... .++++++| +-++++...+. -+|+|.+|.|-=+.
T Consensus 230 ~~~a~~l~~~gvd~lvvdta~G~~~~~L~~I~~-l~~~-~~vpvi~k~v~~~~~a~~l~----G~d~v~vg~g~g~~~~~ 303 (486)
T 2cu0_A 230 IKRAIELDKAGVDVIVVDTAHAHNLKAIKSMKE-MRQK-VDADFIVGNIANPKAVDDLT----FADAVKVGIGPGSICTT 303 (486)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCCCHHHHHHHHH-HHHT-CCSEEEEEEECCHHHHTTCT----TSSEEEECSSCSTTBCH
T ss_pred HHHHHHHHHhcCCceEEEecCCcEeehhhHHHH-HHHH-hCCccccCCcCCHHHHHHhh----CCCeEEEeeeeccceee
Confidence 56677788999998876532 23333444433 3332 26777774 77777665544 68999996433111
Q ss_pred ----CCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 353 ----ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 353 ----elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
..+.. ....-..+.+.+.+.+.|||.+..+. --.|++.|+..|||++|+.
T Consensus 304 r~~~~~g~~-~~~~l~~~~~~~~~~~vpVia~GGi~------------~~~di~kalalGA~~v~~g 357 (486)
T 2cu0_A 304 RIVAGVGVP-QITAVAMVADRAQEYGLYVIADGGIR------------YSGDIVKAIAAGADAVMLG 357 (486)
T ss_dssp HHHTCCCCC-HHHHHHHHHHHHHHHTCEEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred eEEeecCcc-hHHHHHHHHHHHHHcCCcEEecCCCC------------CHHHHHHHHHcCCCceeeC
Confidence 11111 22333344455566689998765443 2367999999999999985
No 100
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=79.71 E-value=29 Score=34.45 Aligned_cols=124 Identities=11% Similarity=0.105 Sum_probs=81.2
Q ss_pred HHHHHHHHhcCCCEEEEcCCC--C---------HHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEcC
Q 008112 279 WDDIKFGVDNKVDFYAVSFVK--D---------AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVAR 347 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~--s---------a~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIaR 347 (577)
.+.++.+.+.|+|.|....-. + .+.++.+++++.+. .+.+++-+-....++-+.+ .+|.+-||.
T Consensus 40 ~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~---~vd~~kIga 114 (262)
T 1zco_A 40 MKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEY--GLVTVTEVMDTRHVELVAK---YSDILQIGA 114 (262)
T ss_dssp HHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECCCGGGHHHHHH---HCSEEEECG
T ss_pred HHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHc--CCcEEEeeCCHHhHHHHHh---hCCEEEECc
Confidence 344556677889888665322 1 78899999998764 5788998888777665555 479999997
Q ss_pred CCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHh-ccceEEe--ccccCCCCCH
Q 008112 348 GDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVRE-GADAVML--SGETAHGKFP 424 (577)
Q Consensus 348 GDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~-G~D~imL--s~ETa~G~yP 424 (577)
+++. . ..+++.+.+.||||++.|.|- +|-.|+.+.+..+.. |.+-++| .|=+..-+||
T Consensus 115 ~~~~------n-----~~ll~~~a~~~kPV~lk~G~~--------~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~ 175 (262)
T 1zco_A 115 RNSQ------N-----FELLKEVGKVENPVLLKRGMG--------NTIQELLYSAEYIMAQGNENVILCERGIRTFETAT 175 (262)
T ss_dssp GGTT------C-----HHHHHHHTTSSSCEEEECCTT--------CCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSS
T ss_pred cccc------C-----HHHHHHHHhcCCcEEEecCCC--------CCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcC
Confidence 7652 2 223444555899999966543 577888888776654 5543444 2222233666
Q ss_pred HH
Q 008112 425 LK 426 (577)
Q Consensus 425 ~e 426 (577)
.+
T Consensus 176 ~~ 177 (262)
T 1zco_A 176 RF 177 (262)
T ss_dssp SS
T ss_pred hh
Confidence 55
No 101
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=79.56 E-value=48 Score=33.28 Aligned_cols=154 Identities=15% Similarity=0.069 Sum_probs=100.4
Q ss_pred CCccCHHHHH-HHHhcCCCEEEEc-CCCCHHHHHHHHHHHHhcCCCceEEEeecCh-hhHhhHHHHHHh-----cC--EE
Q 008112 274 ITEKDWDDIK-FGVDNKVDFYAVS-FVKDAQVVHELKNYLKSCGADIHVIVKIESA-DSIPNLHSIITA-----SD--GA 343 (577)
Q Consensus 274 ltekD~~dI~-~al~~gvD~I~~S-fV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~-~gv~NldeIl~~-----sD--GI 343 (577)
++..|+..|. ...+.|+|.|=+. +..++.|.+.++..... .++..+.+..-+. .++ +..++. .| .+
T Consensus 24 ~~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~~~~~~di---~~a~~~~~~ag~~~v~i 99 (293)
T 3ewb_X 24 FDVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKA-IKHCSVTGLARCVEGDI---DRAEEALKDAVSPQIHI 99 (293)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHH-CCSSEEEEEEESSHHHH---HHHHHHHTTCSSEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHh-cCCCEEEEEecCCHHHH---HHHHHHHhhcCCCEEEE
Confidence 4455655554 4456899998664 45577788887776543 4567776666432 333 333332 33 45
Q ss_pred EEcCCCcc----CCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhccceEEecccc
Q 008112 344 MVARGDLG----AELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSGET 418 (577)
Q Consensus 344 mIaRGDLg----~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~D~imLs~ET 418 (577)
+++--|+- .....++.....+++++.|+++|..|.+.... .+.-+...+.+++. +...|+|.|.|. +|
T Consensus 100 ~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d------~~~~~~~~~~~~~~~~~~~G~~~i~l~-DT 172 (293)
T 3ewb_X 100 FLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPED------ATRSDRAFLIEAVQTAIDAGATVINIP-DT 172 (293)
T ss_dssp EEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEET------GGGSCHHHHHHHHHHHHHTTCCEEEEE-CS
T ss_pred EecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEecc------CCCCCHHHHHHHHHHHHHcCCCEEEec-CC
Confidence 55555542 23444566677788999999999998775431 12334455666666 566899999995 88
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q 008112 419 AHGKFPLKAVKVMHTVSLRT 438 (577)
Q Consensus 419 a~G~yP~eaV~~m~~I~~~a 438 (577)
.=.-.|.+.-+.+..+..+.
T Consensus 173 ~G~~~P~~v~~lv~~l~~~~ 192 (293)
T 3ewb_X 173 VGYTNPTEFGQLFQDLRREI 192 (293)
T ss_dssp SSCCCHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHhc
Confidence 88889999888888877665
No 102
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=79.54 E-value=25 Score=38.01 Aligned_cols=121 Identities=12% Similarity=0.100 Sum_probs=73.0
Q ss_pred HHHHHHHHhcCCCEEEEcCC--CCHHHHHHHHHHHHhcCCC-ceEE-EeecChhhHhhHHHHHHhcCEEEEcCCCccC--
Q 008112 279 WDDIKFGVDNKVDFYAVSFV--KDAQVVHELKNYLKSCGAD-IHVI-VKIESADSIPNLHSIITASDGAMVARGDLGA-- 352 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV--~sa~dv~~lr~~l~~~~~~-i~Ii-aKIEt~~gv~NldeIl~~sDGImIaRGDLg~-- 352 (577)
.+.++...+.|++.+.+..- .+...+..+ +.+.+...+ +.++ ..+.|.+..+.+.+. -+|++.+|.|-=+.
T Consensus 244 ~e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i-~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~a--Gad~I~Vg~~~g~~~~ 320 (503)
T 1me8_A 244 RERVPALVEAGADVLCIDSSDGFSEWQKITI-GWIREKYGDKVKVGAGNIVDGEGFRYLADA--GADFIKIGIGGGSICI 320 (503)
T ss_dssp HHHHHHHHHHTCSEEEECCSCCCSHHHHHHH-HHHHHHHGGGSCEEEEEECSHHHHHHHHHH--TCSEEEECSSCSTTCC
T ss_pred HHHHHHHHhhhccceEEecccCcccchhhHH-HHHHHhCCCCceEeeccccCHHHHHHHHHh--CCCeEEecccCCcCcc
Confidence 45566777889999877321 222222222 333332223 5555 468887766554332 38999987532111
Q ss_pred -----CCCCCcHHHHHHHHHHHHHHc------CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 353 -----ELPIEEVPLLQEEIIRTCRSM------GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 353 -----elg~e~v~~~qk~Ii~~c~~a------GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
..+.. -..+..++.++|+.. ++|+|.+..+. + -.|++.|+..|||++|+.
T Consensus 321 ~r~~~~~g~p-~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~---------~---~~di~kAlalGA~~V~iG 381 (503)
T 1me8_A 321 TREQKGIGRG-QATAVIDVVAERNKYFEETGIYIPVCSDGGIV---------Y---DYHMTLALAMGADFIMLG 381 (503)
T ss_dssp STTTTCCCCC-HHHHHHHHHHHHHHHHHHHSEECCEEEESCCC---------S---HHHHHHHHHTTCSEEEES
T ss_pred cccccCCCCc-hHHHHHHHHHHHHHHhhhcCCCceEEEeCCCC---------C---HHHHHHHHHcCCCEEEEC
Confidence 11222 334556777777777 89999766544 2 367999999999999995
No 103
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=79.42 E-value=13 Score=37.04 Aligned_cols=149 Identities=13% Similarity=0.145 Sum_probs=92.2
Q ss_pred CCCCccCHHHH-HHHHhc--CCCEEEEcCCCCHHHHHHHHHHHHhcCC-CceEEEeecChhhHhhHHHHHH--------h
Q 008112 272 PSITEKDWDDI-KFGVDN--KVDFYAVSFVKDAQVVHELKNYLKSCGA-DIHVIVKIESADSIPNLHSIIT--------A 339 (577)
Q Consensus 272 p~ltekD~~dI-~~al~~--gvD~I~~SfV~sa~dv~~lr~~l~~~~~-~i~IiaKIEt~~gv~NldeIl~--------~ 339 (577)
|..|+.|.+.+ +.+.+. |++.|+++ +..+..+++.+...+. .++|.+-|=-|.|-.+.+..+. =
T Consensus 23 p~~t~~~i~~lc~eA~~~~~~~~aVcV~----p~~v~~a~~~L~~~g~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~G 98 (260)
T 1p1x_A 23 DDDTDEKVIALCHQAKTPVGNTAAICIY----PRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIDIALAETRAAIAYG 98 (260)
T ss_dssp TTCCHHHHHHHHHHTEETTEECSEEECC----GGGHHHHHHHHHHTTCTTSEEEEEESTTTCCSCHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHhccCCceEEEEC----HHHHHHHHHHhhhcCCCCceEEEEeCCCCCCCcHHHHHHHHHHHHHcC
Confidence 44466665444 455666 78888754 5678888888864344 6888888755555444443222 1
Q ss_pred cCEEE--EcCCCccCCCCCCcHHHHHHHHHHHHHHcCCce--EEEehhhHhhhcCCCCChHh-HHHHHH-HHHhccceEE
Q 008112 340 SDGAM--VARGDLGAELPIEEVPLLQEEIIRTCRSMGKAV--IVATNMLESMIVHPTPTRAE-VSDIAI-AVREGADAVM 413 (577)
Q Consensus 340 sDGIm--IaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPv--i~ATq~LeSM~~~~~PtrAE-v~Dv~n-av~~G~D~im 413 (577)
+|.|- +..|-| .+=.++.+..-.+.+.++|..+|+|+ |+.|-.| +..| +..... ++..|+|.|=
T Consensus 99 AdEIDmVinig~l-~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L---------~d~e~i~~a~~ia~eaGADfVK 168 (260)
T 1p1x_A 99 ADEVDVVFPYRAL-MAGNEQVGFDLVKACKEACAAANVLLKVIIETGEL---------KDEALIRKASEISIKAGADFIK 168 (260)
T ss_dssp CSEEEEECCHHHH-HTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHH---------CSHHHHHHHHHHHHHTTCSEEE
T ss_pred CCEEEEeccHHhh-hCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccC---------CcHHHHHHHHHHHHHhCCCEEE
Confidence 55442 122221 01112345666667788888778884 8777766 5566 433333 7889999987
Q ss_pred eccccCCCCC----HHHHHHHHHHHHHHH
Q 008112 414 LSGETAHGKF----PLKAVKVMHTVSLRT 438 (577)
Q Consensus 414 Ls~ETa~G~y----P~eaV~~m~~I~~~a 438 (577)
-| .|.. -.+.|+.|++.++..
T Consensus 169 TS----TGf~~~gAt~e~v~lm~~~I~~~ 193 (260)
T 1p1x_A 169 TS----TGKVAVNATPESARIMMEVIRDM 193 (260)
T ss_dssp CC----CSCSSCCCCHHHHHHHHHHHHHH
T ss_pred eC----CCCCCCCCCHHHHHHHHHHHHHh
Confidence 65 4554 469999999988765
No 104
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=78.58 E-value=42 Score=34.93 Aligned_cols=119 Identities=17% Similarity=0.284 Sum_probs=83.0
Q ss_pred HHHHHHHHhcCCCEEEEc--------------CC----------------CCHHHHHHHHHHHHhcCCCceEEEeecChh
Q 008112 279 WDDIKFGVDNKVDFYAVS--------------FV----------------KDAQVVHELKNYLKSCGADIHVIVKIESAD 328 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~S--------------fV----------------~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~ 328 (577)
.+.++.+.+.|+|.|=.- |- -+.++.++++++.++. .+.+++-+=..+
T Consensus 38 ~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~--Gi~~~st~~d~~ 115 (349)
T 2wqp_A 38 FEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESK--GMIFISTLFSRA 115 (349)
T ss_dssp HHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHT--TCEEEEEECSHH
T ss_pred HHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHh--CCeEEEeeCCHH
Confidence 444567778899988642 32 2457778888888764 477888776666
Q ss_pred hHhhHHHHHHh-cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHH-
Q 008112 329 SIPNLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVR- 406 (577)
Q Consensus 329 gv~NldeIl~~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~- 406 (577)
+++-+++ . +|.+=||-+|+- .++ +++.+.+.|||+|+.|.|- |-+|+...++.+.
T Consensus 116 svd~l~~---~~v~~~KI~S~~~~------n~~-----LL~~va~~gkPviLstGma---------t~~Ei~~Ave~i~~ 172 (349)
T 2wqp_A 116 AALRLQR---MDIPAYKIGSGECN------NYP-----LIKLVASFGKPIILSTGMN---------SIESIKKSVEIIRE 172 (349)
T ss_dssp HHHHHHH---HTCSCEEECGGGTT------CHH-----HHHHHHTTCSCEEEECTTC---------CHHHHHHHHHHHHH
T ss_pred HHHHHHh---cCCCEEEECccccc------CHH-----HHHHHHhcCCeEEEECCCC---------CHHHHHHHHHHHHH
Confidence 6655544 4 799999977763 333 3566677899999999863 7799999998876
Q ss_pred hccceEEeccccCCCCCHH
Q 008112 407 EGADAVMLSGETAHGKFPL 425 (577)
Q Consensus 407 ~G~D~imLs~ETa~G~yP~ 425 (577)
.|.+.++|-. +-.||.
T Consensus 173 ~G~~iiLlhc---~s~Yp~ 188 (349)
T 2wqp_A 173 AGVPYALLHC---TNIYPT 188 (349)
T ss_dssp HTCCEEEEEC---CCCSSC
T ss_pred cCCCEEEEec---cCCCCC
Confidence 4667777732 334765
No 105
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=77.85 E-value=17 Score=34.69 Aligned_cols=132 Identities=14% Similarity=0.152 Sum_probs=72.2
Q ss_pred CHHHHHHHHhcCCCEEEEcCCCC--H--HHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEE---EEcC--
Q 008112 278 DWDDIKFGVDNKVDFYAVSFVKD--A--QVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGA---MVAR-- 347 (577)
Q Consensus 278 D~~dI~~al~~gvD~I~~SfV~s--a--~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGI---mIaR-- 347 (577)
+.+.++.+++.|+|+|.+..... + +.+.++.+.+.+...+..++..+.|.+- +....+. +|.| +.+.
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t~~e---a~~a~~~Gad~i~~~v~g~~~ 166 (234)
T 1yxy_A 90 TMTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADISTFDE---GLVAHQAGIDFVGTTLSGYTP 166 (234)
T ss_dssp SHHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSSHHH---HHHHHHTTCSEEECTTTTSST
T ss_pred hHHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeCCCHHH---HHHHHHcCCCEEeeeccccCC
Confidence 56778889999999998755422 1 1233333333333335678887776543 2222222 8887 2332
Q ss_pred CCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHH
Q 008112 348 GDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKA 427 (577)
Q Consensus 348 GDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~ea 427 (577)
+..+. .+ ..+..+ +++ +.. +.|++..-. .-|. .|+..++..|+|++++.. +.=+ |.++
T Consensus 167 ~~~~~-~~-~~~~~i-~~~---~~~-~ipvia~GG---------I~s~---~~~~~~~~~Gad~v~vGs--al~~-p~~~ 224 (234)
T 1yxy_A 167 YSRQE-AG-PDVALI-EAL---CKA-GIAVIAEGK---------IHSP---EEAKKINDLGVAGIVVGG--AITR-PKEI 224 (234)
T ss_dssp TSCCS-SS-CCHHHH-HHH---HHT-TCCEEEESC---------CCSH---HHHHHHHTTCCSEEEECH--HHHC-HHHH
T ss_pred CCcCC-CC-CCHHHH-HHH---HhC-CCCEEEECC---------CCCH---HHHHHHHHCCCCEEEEch--HHhC-hHHH
Confidence 22111 11 233222 222 223 789886543 2233 346667778999999863 3323 8777
Q ss_pred HHHHHHH
Q 008112 428 VKVMHTV 434 (577)
Q Consensus 428 V~~m~~I 434 (577)
++.+.+.
T Consensus 225 ~~~l~~~ 231 (234)
T 1yxy_A 225 AERFIEA 231 (234)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776654
No 106
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=77.46 E-value=17 Score=34.88 Aligned_cols=134 Identities=14% Similarity=0.180 Sum_probs=72.6
Q ss_pred CHHHHHHHHhcCCCEEEEcC--CCCHHHHHHHHHHHHhcCCC-ceEEE---------eecCh--------hhHhhHHHHH
Q 008112 278 DWDDIKFGVDNKVDFYAVSF--VKDAQVVHELKNYLKSCGAD-IHVIV---------KIESA--------DSIPNLHSII 337 (577)
Q Consensus 278 D~~dI~~al~~gvD~I~~Sf--V~sa~dv~~lr~~l~~~~~~-i~Iia---------KIEt~--------~gv~NldeIl 337 (577)
+.++++.+++.|+|+|.+.- .++++.+.++.+.+ +.+ +.+-. ++++. ...+.+..+.
T Consensus 86 ~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~---~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~ 162 (252)
T 1ka9_F 86 SLEDARKLLLSGADKVSVNSAAVRRPELIRELADHF---GAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGV 162 (252)
T ss_dssp SHHHHHHHHHHTCSEEEECHHHHHCTHHHHHHHHHH---CGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEChHHHhCcHHHHHHHHHc---CCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHH
Confidence 45788888999999998864 44555555555544 322 21111 12221 1244455555
Q ss_pred Hh-cCEEEEc-CCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 338 TA-SDGAMVA-RGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 338 ~~-sDGImIa-RGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
+. +++|++. ++-=+...+. .+ ..+-+.++..++|++.... .-+. .|+..+...|+|++++.
T Consensus 163 ~~G~~~i~~~~~~~~g~~~g~-~~----~~i~~l~~~~~ipvia~GG---------I~~~---~d~~~~~~~Gadgv~vg 225 (252)
T 1ka9_F 163 ELGAGEILLTSMDRDGTKEGY-DL----RLTRMVAEAVGVPVIASGG---------AGRM---EHFLEAFQAGAEAALAA 225 (252)
T ss_dssp HHTCCEEEEEETTTTTTCSCC-CH----HHHHHHHHHCSSCEEEESC---------CCSH---HHHHHHHHTTCSEEEES
T ss_pred HcCCCEEEEecccCCCCcCCC-CH----HHHHHHHHHcCCCEEEeCC---------CCCH---HHHHHHHHCCCHHHHHH
Confidence 55 8888875 2111222232 22 2222233455899987543 3344 34555566799999986
Q ss_pred cccCCCC-CHHHHHHHH
Q 008112 416 GETAHGK-FPLKAVKVM 431 (577)
Q Consensus 416 ~ETa~G~-yP~eaV~~m 431 (577)
.---.+. -|.++.+.+
T Consensus 226 sal~~~~~~~~~~~~~l 242 (252)
T 1ka9_F 226 SVFHFGEIPIPKLKRYL 242 (252)
T ss_dssp HHHHTTSSCHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHH
Confidence 4434455 455555553
No 107
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=77.30 E-value=15 Score=34.93 Aligned_cols=137 Identities=10% Similarity=0.092 Sum_probs=76.3
Q ss_pred HHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceE-EE-eecChhhHhhHHHHHHhcCEEEEcCCCccCCCCCCcHHH
Q 008112 284 FGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHV-IV-KIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPL 361 (577)
Q Consensus 284 ~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~I-ia-KIEt~~gv~NldeIl~~sDGImIaRGDLg~elg~e~v~~ 361 (577)
.+.+.|+|+|.+..--..+.++.+.+.+++.|....+ +. -+ |..-.+.+.++ -.+-+.+.++-++.+.|+...+.
T Consensus 75 ~~~~~Gad~itvh~~~g~~~l~~~~~~~~~~g~~~~~~ll~~~-t~~~~~~l~~~--~~~~~vl~~a~~~~~~G~~g~~~ 151 (216)
T 1q6o_A 75 MCFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYW-TWEQAQQWRDA--GIGQVVYHRSRDAQAAGVAWGEA 151 (216)
T ss_dssp HHHHTTCSEEEEETTSCHHHHHHHHHHHHHTTCEEEEEECSCC-CHHHHHHHHHT--TCCEEEEECCHHHHHTTCCCCHH
T ss_pred HHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCceeeeeeCC-ChhhHHHHHhc--CcHHHHHHHHHHHHhcCCCCCHH
Confidence 5668999999988766666688888888776554322 11 11 12233444433 14445555555555555543122
Q ss_pred HHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHH
Q 008112 362 LQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLR 437 (577)
Q Consensus 362 ~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~ 437 (577)
-.+.+-+.+ ..+.|+++.-.+ .|.. +..++..|+|.+....--....-|.++++.+.+.+++
T Consensus 152 ~i~~lr~~~-~~~~~i~v~GGI--------~~~~-----~~~~~~aGad~ivvG~~I~~a~dp~~~~~~~~~~i~~ 213 (216)
T 1q6o_A 152 DITAIKRLS-DMGFKVTVTGGL--------ALED-----LPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIAE 213 (216)
T ss_dssp HHHHHHHHH-HTTCEEEEESSC--------CGGG-----GGGGTTSCCSEEEESHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhc-CCCCcEEEECCc--------Chhh-----HHHHHHcCCCEEEEeehhcCCCCHHHHHHHHHHHHHh
Confidence 222333333 235556653221 1211 3467788999999853333334599999888776543
No 108
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=76.51 E-value=49 Score=34.46 Aligned_cols=159 Identities=11% Similarity=0.099 Sum_probs=102.9
Q ss_pred CCCccCHHHHHHHH-hcCCCEEEE-cCCCCHHHHHHHHHHHHhcCCCceEEEeec-ChhhHhhHHHHHH-h-cC--EEEE
Q 008112 273 SITEKDWDDIKFGV-DNKVDFYAV-SFVKDAQVVHELKNYLKSCGADIHVIVKIE-SADSIPNLHSIIT-A-SD--GAMV 345 (577)
Q Consensus 273 ~ltekD~~dI~~al-~~gvD~I~~-SfV~sa~dv~~lr~~l~~~~~~i~IiaKIE-t~~gv~NldeIl~-~-sD--GImI 345 (577)
.++..|+-.|...+ +.|+|.|=+ +|+-++.|.+.++.... ...+..+.+-.= +...++..-+-+. . .| .+++
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~-~~~~~~i~~l~r~~~~di~~a~~al~~ag~~~v~if~ 108 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAK-TITKSTVCSLSRAIERDIRQAGEAVAPAPKKRIHTFI 108 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHT-TCSSSEEEEEEESSHHHHHHHHHHHTTSSSEEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHH-hCCCCeEEEEecCCHHHHHHHHHHHhhCCCCEEEEEe
Confidence 45667766665554 589999855 56778899999988664 345555554431 4444443222211 2 34 4566
Q ss_pred cCCCcc----CCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhccceEEeccccCC
Q 008112 346 ARGDLG----AELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSGETAH 420 (577)
Q Consensus 346 aRGDLg----~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~D~imLs~ETa~ 420 (577)
+--|+- ..+..+++.....++++.|+.+|..|.+..+. ...-+...+.+++. +...|+|.|.|. +|.=
T Consensus 109 ~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed------~~r~~~~~~~~~~~~~~~~Ga~~i~l~-DT~G 181 (370)
T 3rmj_A 109 ATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCED------ALRSEIDFLAEICGAVIEAGATTINIP-DTVG 181 (370)
T ss_dssp ECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEET------GGGSCHHHHHHHHHHHHHHTCCEEEEE-CSSS
T ss_pred cCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecCC------CCccCHHHHHHHHHHHHHcCCCEEEec-CccC
Confidence 655652 23444566666677899999999988765431 12233344555555 567899999995 9998
Q ss_pred CCCHHHHHHHHHHHHHHHh
Q 008112 421 GKFPLKAVKVMHTVSLRTE 439 (577)
Q Consensus 421 G~yP~eaV~~m~~I~~~aE 439 (577)
.-.|.+.-+.+..+.++.-
T Consensus 182 ~~~P~~~~~lv~~l~~~~~ 200 (370)
T 3rmj_A 182 YSIPYKTEEFFRELIAKTP 200 (370)
T ss_dssp CCCHHHHHHHHHHHHHHST
T ss_pred CcCHHHHHHHHHHHHHhCC
Confidence 9999999998888877653
No 109
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=76.30 E-value=18 Score=36.36 Aligned_cols=128 Identities=18% Similarity=0.177 Sum_probs=76.9
Q ss_pred HHHHHHHhcCCCEE-EEc-------------CCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEE
Q 008112 280 DDIKFGVDNKVDFY-AVS-------------FVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAM 344 (577)
Q Consensus 280 ~dI~~al~~gvD~I-~~S-------------fV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGIm 344 (577)
+.++.+.+.|+|+| .+- ..++++.+.++++. .+++++.|+=.- .++..+...+. +|+|.
T Consensus 32 ~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~-----~~iPv~~k~r~g-~~~~~~~~~a~GAd~V~ 105 (305)
T 2nv1_A 32 EQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNA-----VSIPVMAKARIG-HIVEARVLEAMGVDYID 105 (305)
T ss_dssp HHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHH-----CSSCEEEEECTT-CHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHh-----CCCCEEeccccc-chHHHHHHHHCCCCEEE
Confidence 55667788999999 442 23366777776543 257788876431 12333334444 99996
Q ss_pred EcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCH
Q 008112 345 VARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFP 424 (577)
Q Consensus 345 IaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP 424 (577)
+-.++. .+.+ .+++. |+..|.++++.+. +. .+...++..|+|.|.++||+..| -.
T Consensus 106 -~~~~l~----~~~~----~~~i~-~~~~g~~v~~~~~-----------~~---~e~~~a~~~Gad~V~~~G~~g~g-~~ 160 (305)
T 2nv1_A 106 -ESEVLT----PADE----EFHLN-KNEYTVPFVCGCR-----------DL---GEATRRIAEGASMLRTKGEPGTG-NI 160 (305)
T ss_dssp -ECTTSC----CSCS----SCCCC-GGGCSSCEEEEES-----------SH---HHHHHHHHTTCSEEEECCCTTSC-CT
T ss_pred -EeccCC----HHHH----HHHHH-HhccCCcEEEEeC-----------CH---HHHHHHHHCCCCEEEeccccCcc-ch
Confidence 444442 2221 11222 4567899887553 22 24566778999999999988777 45
Q ss_pred HHHHHHHHHHHHHH
Q 008112 425 LKAVKVMHTVSLRT 438 (577)
Q Consensus 425 ~eaV~~m~~I~~~a 438 (577)
.+++...+.+....
T Consensus 161 ~~~~~h~rt~~~~i 174 (305)
T 2nv1_A 161 VEAVRHMRKVNAQV 174 (305)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHhhhhhhhccc
Confidence 56666655543333
No 110
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=75.98 E-value=43 Score=35.67 Aligned_cols=123 Identities=17% Similarity=0.199 Sum_probs=73.8
Q ss_pred cCHHHHHHHHhcCCCEEEEcCCC-CHHHHHHHHHHHHhcCCCceEEE-eecChhhHhhHHHHHHh-cCEEEEcCCC--cc
Q 008112 277 KDWDDIKFGVDNKVDFYAVSFVK-DAQVVHELKNYLKSCGADIHVIV-KIESADSIPNLHSIITA-SDGAMVARGD--LG 351 (577)
Q Consensus 277 kD~~dI~~al~~gvD~I~~SfV~-sa~dv~~lr~~l~~~~~~i~Iia-KIEt~~gv~NldeIl~~-sDGImIaRGD--Lg 351 (577)
...+.++++++.|+|.|.+.... ..+...+..+.+.+.-.++.+++ .+-+.+... ..++. +|+|.++-|- ..
T Consensus 233 ~~~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~~p~~pvi~G~v~t~~~a~---~~~~~Gad~I~vg~g~g~~~ 309 (491)
T 1zfj_A 233 DTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNIATAEGAR---ALYDAGVDVVKVGIGPGSIC 309 (491)
T ss_dssp THHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHCSSSCEEEEEECSHHHHH---HHHHTTCSEEEECSSCCTTB
T ss_pred hHHHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHHCCCCcEeCCCccCHHHHH---HHHHcCCCEEEECccCCcce
Confidence 44678889999999999887532 11222222222222212444443 565654443 33333 9999997431 00
Q ss_pred C-----CCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 352 A-----ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 352 ~-----elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
. ..+. ......+++...++..+.|+|....+- -..|+..++..|+|++++.
T Consensus 310 ~tr~~~~~~~-p~~~~l~~~~~~~~~~~ipvia~GGi~------------~~~di~kal~~GA~~v~vG 365 (491)
T 1zfj_A 310 TTRVVAGVGV-PQVTAIYDAAAVAREYGKTIIADGGIK------------YSGDIVKALAAGGNAVMLG 365 (491)
T ss_dssp CHHHHTCCCC-CHHHHHHHHHHHHHHTTCEEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred EEeeecCCCC-CcHHHHHHHHHHHhhcCCCEEeeCCCC------------CHHHHHHHHHcCCcceeeC
Confidence 0 1111 234455777778888899998755433 2467899999999999984
No 111
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=75.67 E-value=2.7 Score=41.21 Aligned_cols=142 Identities=13% Similarity=0.051 Sum_probs=86.5
Q ss_pred CCCCccCHHHH-HHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHH------HHh-cCEE
Q 008112 272 PSITEKDWDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSI------ITA-SDGA 343 (577)
Q Consensus 272 p~ltekD~~dI-~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeI------l~~-sDGI 343 (577)
|..|+.|.+.+ +.+.+.|++.|+++ +..+...++++. + +++.+-|=-|.|-.+.+.. ++. +|.|
T Consensus 12 p~~t~~~i~~l~~~A~~~~~~aVcv~----p~~v~~a~~~l~--g--v~v~tvigFP~G~~~~~~k~~E~~~i~~GAdEI 83 (226)
T 1vcv_A 12 PYLTVDEAVAGARKAEELGVAAYCVN----PIYAPVVRPLLR--K--VKLCVVADFPFGALPTASRIALVSRLAEVADEI 83 (226)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHGGGCS--S--SEEEEEESTTTCCSCHHHHHHHHHHHTTTCSEE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhC--C--CeEEEEeCCCCCCCchHHHHHHHHHHHCCCCEE
Confidence 55577775554 57888999999875 445666666653 2 7777777554543333322 322 4433
Q ss_pred EEcCCCccCCCC---CCcHHHHH---HHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhccceEEecc
Q 008112 344 MVARGDLGAELP---IEEVPLLQ---EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSG 416 (577)
Q Consensus 344 mIaRGDLg~elg---~e~v~~~q---k~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~D~imLs~ 416 (577)
-+ -+.++ -.+...+. +.+.++|...+.+||+.|-.| |..|+..... ++..|+|.|=-|
T Consensus 84 D~-----Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~L---------t~eei~~a~~ia~eaGADfVKTS- 148 (226)
T 1vcv_A 84 DV-----VAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPYL---------RDEERYTLYDIIAEAGAHFIKSS- 148 (226)
T ss_dssp EE-----ECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC---------CHHHHHHHHHHHHHHTCSEEECC-
T ss_pred EE-----ecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccCC---------CHHHHHHHHHHHHHcCCCEEEeC-
Confidence 21 11222 12334444 445555654566788877655 6777766666 777899998765
Q ss_pred ccCCCCC--------------HHHHHHHHHHHHHHHh
Q 008112 417 ETAHGKF--------------PLKAVKVMHTVSLRTE 439 (577)
Q Consensus 417 ETa~G~y--------------P~eaV~~m~~I~~~aE 439 (577)
.|.. -++.|+.|++.++.+.
T Consensus 149 ---TGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g 182 (226)
T 1vcv_A 149 ---TGFAEEAYAARQGNPVHSTPERAAAIARYIKEKG 182 (226)
T ss_dssp ---CSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHT
T ss_pred ---CCCCccccccccCCCCCCCHHHHHHHHHHHHHhC
Confidence 4443 3578999998877665
No 112
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=74.43 E-value=25 Score=33.06 Aligned_cols=128 Identities=13% Similarity=0.100 Sum_probs=69.4
Q ss_pred HHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHH-hcCEEEEcCC-C--c----cCC
Q 008112 282 IKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT-ASDGAMVARG-D--L----GAE 353 (577)
Q Consensus 282 I~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~-~sDGImIaRG-D--L----g~e 353 (577)
++.+.+.|+|+|.++... .++.++++.+ +. ..+-.-..|.+- +....+ -+|++.+++- + - +..
T Consensus 87 ~~~a~~~gad~v~l~~~~--~~~~~~~~~~---g~-~~~~~s~~t~~e---~~~a~~~g~d~v~~~~v~~t~~~~~~~~~ 157 (227)
T 2tps_A 87 VELALNLKADGIHIGQED--ANAKEVRAAI---GD-MILGVSAHTMSE---VKQAEEDGADYVGLGPIYPTETKKDTRAV 157 (227)
T ss_dssp HHHHHHHTCSEEEECTTS--SCHHHHHHHH---TT-SEEEEEECSHHH---HHHHHHHTCSEEEECCSSCCCSSSSCCCC
T ss_pred HHHHHHcCCCEEEECCCc--cCHHHHHHhc---CC-cEEEEecCCHHH---HHHHHhCCCCEEEECCCcCCCCCCCCCCc
Confidence 456778899999886533 2355555543 33 222222344432 222222 2899998531 1 1 122
Q ss_pred CCCCcHHHHHHHHHHHHHHcC-CceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHH
Q 008112 354 LPIEEVPLLQEEIIRTCRSMG-KAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 432 (577)
Q Consensus 354 lg~e~v~~~qk~Ii~~c~~aG-KPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~ 432 (577)
.+++.+.. .++... +|++.+..+ +. .++..+...|+|++.+++--...+.|.+.++.+.
T Consensus 158 ~~~~~l~~-------~~~~~~~~pvia~GGI----------~~---~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~ 217 (227)
T 2tps_A 158 QGVSLIEA-------VRRQGISIPIVGIGGI----------TI---DNAAPVIQAGADGVSMISAISQAEDPESAARKFR 217 (227)
T ss_dssp CTTHHHHH-------HHHTTCCCCEEEESSC----------CT---TTSHHHHHTTCSEEEESHHHHTSSCHHHHHHHHH
T ss_pred cCHHHHHH-------HHHhCCCCCEEEEcCC----------CH---HHHHHHHHcCCCEEEEhHHhhcCCCHHHHHHHHH
Confidence 23222222 223335 898875432 21 2355566789999998764444467878887776
Q ss_pred HHHHHH
Q 008112 433 TVSLRT 438 (577)
Q Consensus 433 ~I~~~a 438 (577)
+.+++.
T Consensus 218 ~~~~~~ 223 (227)
T 2tps_A 218 EEIQTY 223 (227)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 665543
No 113
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=74.42 E-value=41 Score=35.83 Aligned_cols=139 Identities=13% Similarity=0.113 Sum_probs=75.0
Q ss_pred HhcCCCEEEEcC----------CCCHHHHHHHHHHHHhc-------------------CCCce-EEEeecChhhHhhHHH
Q 008112 286 VDNKVDFYAVSF----------VKDAQVVHELKNYLKSC-------------------GADIH-VIVKIESADSIPNLHS 335 (577)
Q Consensus 286 l~~gvD~I~~Sf----------V~sa~dv~~lr~~l~~~-------------------~~~i~-IiaKIEt~~gv~Nlde 335 (577)
+...+|+|-+.+ -++++.+.++.+.+.+. ..+.+ |++||=--..-+++.+
T Consensus 208 l~~~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~~~~~i~~ 287 (415)
T 3i65_A 208 IGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKE 287 (415)
T ss_dssp HGGGCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCCCHHHHHH
T ss_pred HHhhCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCCCCHHHHHH
Confidence 334489887653 24555555554444332 13567 8999943222235666
Q ss_pred HHHh-----cCEEEEcCC-----Cc---cCCCC----CCcHHHHHHHHHHHHHHc--CCceEEEehhhHhhhcCCCCChH
Q 008112 336 IITA-----SDGAMVARG-----DL---GAELP----IEEVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRA 396 (577)
Q Consensus 336 Il~~-----sDGImIaRG-----DL---g~elg----~e~v~~~qk~Ii~~c~~a--GKPvi~ATq~LeSM~~~~~PtrA 396 (577)
|++. +|||.+--. |+ ..+.+ ....+...+.|-+..++. .+|+|....+. |
T Consensus 288 iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~---------s-- 356 (415)
T 3i65_A 288 IADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIF---------S-- 356 (415)
T ss_dssp HHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCC---------S--
T ss_pred HHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCC---------C--
Confidence 6654 899987621 21 11111 112344444444444454 48988754433 2
Q ss_pred hHHHHHHHHHhccceEEeccccCCCCC-HHHHHHHHHHHHHHHhccc
Q 008112 397 EVSDIAIAVREGADAVMLSGETAHGKF-PLKAVKVMHTVSLRTEATI 442 (577)
Q Consensus 397 Ev~Dv~nav~~G~D~imLs~ETa~G~y-P~eaV~~m~~I~~~aE~~~ 442 (577)
..|+..++..|+|+|++.. +.-.. | .++.+|.++.+..+
T Consensus 357 -~eDa~e~l~aGAd~VqIgr--a~l~~GP----~~~~~i~~~L~~~l 396 (415)
T 3i65_A 357 -GLDALEKIEAGASVCQLYS--CLVFNGM----KSAVQIKRELNHLL 396 (415)
T ss_dssp -HHHHHHHHHHTEEEEEESH--HHHHHGG----GHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHcCCCEEEEcH--HHHhcCH----HHHHHHHHHHHHHH
Confidence 4678899999999999852 21111 3 24555666655543
No 114
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=74.17 E-value=16 Score=35.36 Aligned_cols=131 Identities=12% Similarity=0.076 Sum_probs=72.1
Q ss_pred HHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHH----HHHHh-----cCEEEEcCCCcc
Q 008112 281 DIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLH----SIITA-----SDGAMVARGDLG 351 (577)
Q Consensus 281 dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~Nld----eIl~~-----sDGImIaRGDLg 351 (577)
.++...+.|+|+|.+.-.-..+.++.+.+.+++.|..+.+++..-++.+.+.++ .++.. .||++++.
T Consensus 83 ~~~~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~g~~v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~a---- 158 (228)
T 3m47_A 83 ICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPS---- 158 (228)
T ss_dssp HHHHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHTCEEEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEECCS----
T ss_pred HHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEECC----
Confidence 445556789999988665566778888888877776666666776665433322 22221 57766531
Q ss_pred CCCCCCcHHHHHHHHHHHHHHcCC-ceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHH
Q 008112 352 AELPIEEVPLLQEEIIRTCRSMGK-AVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKV 430 (577)
Q Consensus 352 ~elg~e~v~~~qk~Ii~~c~~aGK-Pvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~ 430 (577)
.+ +..-+.|-+. .|. ..++ |+-. +++-.+. .++..|+|.+....--....-|.++++.
T Consensus 159 -----t~-~~e~~~ir~~---~~~~~~iv-~PGI----------~~~g~~p-~~~~aGad~iVvGr~I~~a~dp~~a~~~ 217 (228)
T 3m47_A 159 -----TR-PERLSRLREI---IGQDSFLI-SPGV----------GAQGGDP-GETLRFADAIIVGRSIYLADNPAAAAAG 217 (228)
T ss_dssp -----SC-HHHHHHHHHH---HCSSSEEE-ECC--------------------CGGGTCSEEEECHHHHTSSCHHHHHHH
T ss_pred -----CC-hHHHHHHHHh---cCCCCEEE-ecCc----------CcCCCCH-hHHHcCCCEEEECHHHhCCCCHHHHHHH
Confidence 11 1111222222 233 2233 2211 2233356 7788999998886554455689888887
Q ss_pred HHHHHH
Q 008112 431 MHTVSL 436 (577)
Q Consensus 431 m~~I~~ 436 (577)
+.+..+
T Consensus 218 ~~~~~~ 223 (228)
T 3m47_A 218 AIESIK 223 (228)
T ss_dssp HHHHC-
T ss_pred HHHHHH
Confidence 766543
No 115
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=73.53 E-value=13 Score=35.75 Aligned_cols=135 Identities=9% Similarity=0.062 Sum_probs=70.3
Q ss_pred cCHHHHHHHHhcCCCEEEEcC--CCCHHHHHHHHHHHHhcCCC-ceEE--E-------eecCh--------hhHhhHHHH
Q 008112 277 KDWDDIKFGVDNKVDFYAVSF--VKDAQVVHELKNYLKSCGAD-IHVI--V-------KIESA--------DSIPNLHSI 336 (577)
Q Consensus 277 kD~~dI~~al~~gvD~I~~Sf--V~sa~dv~~lr~~l~~~~~~-i~Ii--a-------KIEt~--------~gv~NldeI 336 (577)
.+.++++.+++.|+|+|.+.- .++++.+.++.+.+ +.+ +.+- + ++++. ..++.+..+
T Consensus 84 ~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~---g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~ 160 (253)
T 1thf_D 84 HDFETASELILRGADKVSINTAAVENPSLITQIAQTF---GSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEV 160 (253)
T ss_dssp CSHHHHHHHHHTTCSEEEESHHHHHCTHHHHHHHHHH---CGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEChHHHhChHHHHHHHHHc---CCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHH
Confidence 456788888899999998764 23333444444433 422 2111 1 12221 123444555
Q ss_pred HHh-cCEEEEc-CCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEe
Q 008112 337 ITA-SDGAMVA-RGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML 414 (577)
Q Consensus 337 l~~-sDGImIa-RGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imL 414 (577)
.+. +|.|++- +.-=+...++ .+. ..+++ ++..+.|++.... .-+. .|+..+...|+|++++
T Consensus 161 ~~~G~~~i~~~~~~~~g~~~g~-~~~-~~~~l---~~~~~ipvia~GG---------I~~~---~d~~~~~~~Gadgv~v 223 (253)
T 1thf_D 161 EKRGAGEILLTSIDRDGTKSGY-DTE-MIRFV---RPLTTLPIIASGG---------AGKM---EHFLEAFLAGADAALA 223 (253)
T ss_dssp HHTTCSEEEEEETTTTTSCSCC-CHH-HHHHH---GGGCCSCEEEESC---------CCSH---HHHHHHHHTTCSEEEE
T ss_pred HHCCCCEEEEEeccCCCCCCCC-CHH-HHHHH---HHhcCCCEEEECC---------CCCH---HHHHHHHHcCChHHHH
Confidence 555 7888874 1100112222 222 22222 2345899887543 3344 3455566789999998
Q ss_pred ccccCCCC-CHHHHHHHH
Q 008112 415 SGETAHGK-FPLKAVKVM 431 (577)
Q Consensus 415 s~ETa~G~-yP~eaV~~m 431 (577)
..---.+. -|.++++.+
T Consensus 224 Gsal~~~~~~~~~~~~~l 241 (253)
T 1thf_D 224 ASVFHFREIDVRELKEYL 241 (253)
T ss_dssp SHHHHTTCSCHHHHHHHH
T ss_pred HHHHHcCCCCHHHHHHHH
Confidence 53222343 466666664
No 116
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=73.25 E-value=27 Score=32.38 Aligned_cols=132 Identities=8% Similarity=0.045 Sum_probs=69.9
Q ss_pred HHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEcCC-C--ccCCCCCC
Q 008112 281 DIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARG-D--LGAELPIE 357 (577)
Q Consensus 281 dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIaRG-D--Lg~elg~e 357 (577)
+++.+.+.|+|+|.++.-.- ++.+++++. ....+..-+.|.+-+... ...-+|.+++... + -.-.....
T Consensus 78 ~~~~a~~~gad~v~l~~~~~--~~~~~~~~~----~~~~~~v~~~t~~e~~~~--~~~g~d~i~~~~~~~~~~~~~~~~~ 149 (215)
T 1xi3_A 78 RVDVALAVDADGVQLGPEDM--PIEVAKEIA----PNLIIGASVYSLEEALEA--EKKGADYLGAGSVFPTKTKEDARVI 149 (215)
T ss_dssp CHHHHHHHTCSEEEECTTSC--CHHHHHHHC----TTSEEEEEESSHHHHHHH--HHHTCSEEEEECSSCC----CCCCC
T ss_pred hHHHHHHcCCCEEEECCccC--CHHHHHHhC----CCCEEEEecCCHHHHHHH--HhcCCCEEEEcCCccCCCCCCCCCc
Confidence 34567789999998874321 233444432 234444455665433221 1123899998531 1 00000111
Q ss_pred cHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHH
Q 008112 358 EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLR 437 (577)
Q Consensus 358 ~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~ 437 (577)
.+.. -+++ ++...+|++.+-.+ +. .++..+...|+|++.+++--...+-|.+.++.+.+.+++
T Consensus 150 ~~~~-l~~l---~~~~~~pvia~GGI----------~~---~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~ 212 (215)
T 1xi3_A 150 GLEG-LRKI---VESVKIPVVAIGGI----------NK---DNAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIVEE 212 (215)
T ss_dssp HHHH-HHHH---HHHCSSCEEEESSC----------CT---TTHHHHHTTTCSEEEESHHHHTSSSHHHHHHHHHHHHHH
T ss_pred CHHH-HHHH---HHhCCCCEEEECCc----------CH---HHHHHHHHcCCCEEEEhHHHhCCCCHHHHHHHHHHHHhh
Confidence 1211 1222 33448898875432 22 245566778999999875433445687787777666554
No 117
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=72.99 E-value=19 Score=36.06 Aligned_cols=96 Identities=13% Similarity=0.093 Sum_probs=59.1
Q ss_pred HHHHHHhcCCCEEEEc------CCCCHHHHHHHHH-HHHhcCCCceEEEee---cChhhHhhHHHHHHh-cCEEEEcCCC
Q 008112 281 DIKFGVDNKVDFYAVS------FVKDAQVVHELKN-YLKSCGADIHVIVKI---ESADSIPNLHSIITA-SDGAMVARGD 349 (577)
Q Consensus 281 dI~~al~~gvD~I~~S------fV~sa~dv~~lr~-~l~~~~~~i~IiaKI---Et~~gv~NldeIl~~-sDGImIaRGD 349 (577)
.+++-++.|+|+|++. +--|.++=.++.+ ..+..+.+++||+-+ -|.++++......+. +|++|+-+-.
T Consensus 28 lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 107 (292)
T 3daq_A 28 HVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPY 107 (292)
T ss_dssp HHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 4567789999999763 2334444444443 344556789999987 355666655555555 9999997554
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 350 Lg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
+.- ...+.+...-+.|.+ +.+.|+++.
T Consensus 108 y~~-~~~~~l~~~f~~ia~---a~~lPiilY 134 (292)
T 3daq_A 108 YNK-TNQRGLVKHFEAIAD---AVKLPVVLY 134 (292)
T ss_dssp SSC-CCHHHHHHHHHHHHH---HHCSCEEEE
T ss_pred CCC-CCHHHHHHHHHHHHH---hCCCCEEEE
Confidence 422 122344444455544 448999975
No 118
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=72.95 E-value=42 Score=34.92 Aligned_cols=149 Identities=20% Similarity=0.185 Sum_probs=82.3
Q ss_pred ccCHHHHHHH---HhcCCCEEEEcC----------CCCHHHHHHHHHHHHhc------CCCceEEEeecChhhHhhHHHH
Q 008112 276 EKDWDDIKFG---VDNKVDFYAVSF----------VKDAQVVHELKNYLKSC------GADIHVIVKIESADSIPNLHSI 336 (577)
Q Consensus 276 ekD~~dI~~a---l~~gvD~I~~Sf----------V~sa~dv~~lr~~l~~~------~~~i~IiaKIEt~~gv~NldeI 336 (577)
+.+.+|...+ +..++|+|-+.+ .++++.+.++.+.+.+. ..+.+|++||=--...+++.+|
T Consensus 160 ~~~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~i 239 (367)
T 3zwt_A 160 VDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDI 239 (367)
T ss_dssp SCHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHH
T ss_pred CcCHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHH
Confidence 4556665443 334689887642 34566666666555432 2468999999432222356666
Q ss_pred HHh-----cCEEEEc-----CCCc-----cCCCC-C---CcHHHHHHHHHHHHHHc--CCceEEEehhhHhhhcCCCCCh
Q 008112 337 ITA-----SDGAMVA-----RGDL-----GAELP-I---EEVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTR 395 (577)
Q Consensus 337 l~~-----sDGImIa-----RGDL-----g~elg-~---e~v~~~qk~Ii~~c~~a--GKPvi~ATq~LeSM~~~~~Ptr 395 (577)
++. +|||.+- |-++ +.+.+ + ...+...+.+-...+.. .+|+|....+. |
T Consensus 240 a~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~---------s- 309 (367)
T 3zwt_A 240 ASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVS---------S- 309 (367)
T ss_dssp HHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCC---------S-
T ss_pred HHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCC---------C-
Confidence 653 8999874 2111 11111 1 12233334444444455 68988765533 2
Q ss_pred HhHHHHHHHHHhccceEEeccccC-CCCCHHHHHHHHHHHHHHHhccc
Q 008112 396 AEVSDIAIAVREGADAVMLSGETA-HGKFPLKAVKVMHTVSLRTEATI 442 (577)
Q Consensus 396 AEv~Dv~nav~~G~D~imLs~ETa-~G~yP~eaV~~m~~I~~~aE~~~ 442 (577)
..|+..++..|+|+||+..--- .| | .++.+|.+..+..+
T Consensus 310 --~~da~~~l~~GAd~V~vgra~l~~g--P----~~~~~i~~~l~~~m 349 (367)
T 3zwt_A 310 --GQDALEKIRAGASLVQLYTALTFWG--P----PVVGKVKRELEALL 349 (367)
T ss_dssp --HHHHHHHHHHTCSEEEESHHHHHHC--T----HHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHcCCCEEEECHHHHhcC--c----HHHHHHHHHHHHHH
Confidence 3578888889999999963211 12 4 24555555555443
No 119
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=72.84 E-value=77 Score=33.74 Aligned_cols=164 Identities=13% Similarity=0.112 Sum_probs=97.7
Q ss_pred CceeeeCCCCCCCCCCCccCHHHHHH-HHhcCCCEEEEc-CCCCHHHHHHHHHHHHhcCCCceEEEee-cChhhHhhHHH
Q 008112 259 RRHLNVRGKSATLPSITEKDWDDIKF-GVDNKVDFYAVS-FVKDAQVVHELKNYLKSCGADIHVIVKI-ESADSIPNLHS 335 (577)
Q Consensus 259 ~Kginlp~~~~~lp~ltekD~~dI~~-al~~gvD~I~~S-fV~sa~dv~~lr~~l~~~~~~i~IiaKI-Et~~gv~Nlde 335 (577)
|-|-.-|+.. ++..++-.|.. -.+.|+|.|=+. ...++.|...++... +.+.+..+++.+ .+.++ ++.
T Consensus 48 RDG~Q~~~~~-----~s~eeKl~Ia~~L~~~Gv~~IEvG~P~asp~d~~~~~~i~-~~~~~~~v~~~~r~~~~d---i~~ 118 (423)
T 3ivs_A 48 REGEQFANAF-----FDTEKKIQIAKALDNFGVDYIELTSPVASEQSRQDCEAIC-KLGLKCKILTHIRCHMDD---ARV 118 (423)
T ss_dssp TGGGGSTTCC-----CCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHH-TSCCSSEEEEEEESCHHH---HHH
T ss_pred CCCCCCCCCC-----cCHHHHHHHHHHHHHcCCCEEEEeecccCHHHHHHHHHHH-hcCCCCEEEEeeccChhh---HHH
Confidence 4444444443 45556555544 456899999874 466777777776544 445556665532 23333 233
Q ss_pred HHHh-cC--EEEEcCCCccC----CCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHh
Q 008112 336 IITA-SD--GAMVARGDLGA----ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVRE 407 (577)
Q Consensus 336 Il~~-sD--GImIaRGDLg~----elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~ 407 (577)
.++. .| .++++-.|+-. ....+++...-.+.++.|+++|..|.+... +. ..-+...+.+++. +...
T Consensus 119 A~~aG~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~e--da----~r~d~~~~~~v~~~~~~~ 192 (423)
T 3ivs_A 119 AVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSE--DS----FRSDLVDLLSLYKAVDKI 192 (423)
T ss_dssp HHHTTCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEEEEEE--SG----GGSCHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEc--cC----cCCCHHHHHHHHHHHHHh
Confidence 3332 55 44555445322 234456666677899999999999987532 11 1234455566665 4568
Q ss_pred ccceEEeccccCCCCCHHHHHHHHHHHHHHH
Q 008112 408 GADAVMLSGETAHGKFPLKAVKVMHTVSLRT 438 (577)
Q Consensus 408 G~D~imLs~ETa~G~yP~eaV~~m~~I~~~a 438 (577)
|+|.|.|. +|.=.-.|.+.-+.+..+..+.
T Consensus 193 Ga~~i~l~-DTvG~~~P~~v~~lv~~l~~~~ 222 (423)
T 3ivs_A 193 GVNRVGIA-DTVGCATPRQVYDLIRTLRGVV 222 (423)
T ss_dssp CCSEEEEE-ETTSCCCHHHHHHHHHHHHHHC
T ss_pred CCCccccC-CccCcCCHHHHHHHHHHHHhhc
Confidence 99999995 8888889998888887776543
No 120
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=72.20 E-value=20 Score=35.93 Aligned_cols=118 Identities=14% Similarity=0.166 Sum_probs=71.4
Q ss_pred HHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEE-E-cC-CCccCCCCC
Q 008112 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAM-V-AR-GDLGAELPI 356 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGIm-I-aR-GDLg~elg~ 356 (577)
+.++.+.+.|+|++.+|=.-- ++..++++++++.|-+. |-.+=.....+.+..|.+.++|.+ . .+ |==|..-.
T Consensus 116 ~f~~~~~~aGvdGvIipDlp~-ee~~~~~~~~~~~gl~~--I~lvap~t~~eri~~i~~~~~gfiY~vs~~GvTG~~~~- 191 (271)
T 3nav_A 116 DFYQRCQKAGVDSVLIADVPT-NESQPFVAAAEKFGIQP--IFIAPPTASDETLRAVAQLGKGYTYLLSRAGVTGAETK- 191 (271)
T ss_dssp HHHHHHHHHTCCEEEETTSCG-GGCHHHHHHHHHTTCEE--EEEECTTCCHHHHHHHHHHCCSCEEECCCC---------
T ss_pred HHHHHHHHCCCCEEEECCCCH-HHHHHHHHHHHHcCCeE--EEEECCCCCHHHHHHHHHHCCCeEEEEeccCCCCcccC-
Confidence 456777889999999886543 66788888888766552 322322223578899998876543 2 22 11122211
Q ss_pred CcHHHHHHHHHHHHHHc-CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 357 EEVPLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 357 e~v~~~qk~Ii~~c~~a-GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
++.-....++..+++ ..|+++... .=|. .++..++..|+|++...
T Consensus 192 --~~~~~~~~v~~vr~~~~~Pv~vGfG---------Ist~---e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 192 --ANMPVHALLERLQQFDAPPALLGFG---------ISEP---AQVKQAIEAGAAGAISG 237 (271)
T ss_dssp --CCHHHHHHHHHHHHTTCCCEEECSS---------CCSH---HHHHHHHHTTCSEEEES
T ss_pred --CchhHHHHHHHHHHhcCCCEEEECC---------CCCH---HHHHHHHHcCCCEEEEC
Confidence 223345566666665 679987543 2233 34666888999999984
No 121
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=72.11 E-value=16 Score=36.43 Aligned_cols=119 Identities=14% Similarity=0.142 Sum_probs=71.2
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEE-E-cC-CCccCCCC
Q 008112 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAM-V-AR-GDLGAELP 355 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGIm-I-aR-GDLg~elg 355 (577)
.+.++.+.+.|+|++.+|=.- .++..++++++++.|-+...++-=.| ..+.+..|++.++|.+ . .+ |=-|..-
T Consensus 113 e~f~~~~~~aGvdgvii~Dlp-~ee~~~~~~~~~~~gl~~i~liaP~t--~~eri~~i~~~~~gfvY~vS~~GvTG~~~- 188 (267)
T 3vnd_A 113 DEFYTKAQAAGVDSVLIADVP-VEESAPFSKAAKAHGIAPIFIAPPNA--DADTLKMVSEQGEGYTYLLSRAGVTGTES- 188 (267)
T ss_dssp HHHHHHHHHHTCCEEEETTSC-GGGCHHHHHHHHHTTCEEECEECTTC--CHHHHHHHHHHCCSCEEESCCCCCC-----
T ss_pred HHHHHHHHHcCCCEEEeCCCC-HhhHHHHHHHHHHcCCeEEEEECCCC--CHHHHHHHHHhCCCcEEEEecCCCCCCcc-
Confidence 345667788999999998654 46788888888877655322222222 3578999999887443 3 11 2222221
Q ss_pred CCcHHHHHHHHHHHHHHc-CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 356 IEEVPLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 356 ~e~v~~~qk~Ii~~c~~a-GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
.++.-....++..+++ ..|+++-.. .=|. .++..++..|+|++...
T Consensus 189 --~~~~~~~~~v~~vr~~~~~pv~vGfG---------I~~~---e~~~~~~~~gADgvVVG 235 (267)
T 3vnd_A 189 --KAGEPIENILTQLAEFNAPPPLLGFG---------IAEP---EQVRAAIKAGAAGAISG 235 (267)
T ss_dssp ------CHHHHHHHHHTTTCCCEEECSS---------CCSH---HHHHHHHHTTCSEEEEC
T ss_pred --CCcHHHHHHHHHHHHhcCCCEEEECC---------cCCH---HHHHHHHHcCCCEEEEC
Confidence 1222234555665654 679887443 2233 34566888999999984
No 122
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=71.60 E-value=59 Score=31.44 Aligned_cols=132 Identities=12% Similarity=0.038 Sum_probs=69.0
Q ss_pred HHHHHHHhcCCCEEEEcCCC----------CHHHHHHHHHHHHhcCCCceEEEe-------ecC------hhhHhhHHHH
Q 008112 280 DDIKFGVDNKVDFYAVSFVK----------DAQVVHELKNYLKSCGADIHVIVK-------IES------ADSIPNLHSI 336 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV~----------sa~dv~~lr~~l~~~~~~i~IiaK-------IEt------~~gv~NldeI 336 (577)
+.++.+.+.|+|+|-+.+-. +.+++.++++.+++.|-.+..+.- +-+ .++++.+...
T Consensus 34 ~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~ 113 (295)
T 3cqj_A 34 ERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKA 113 (295)
T ss_dssp HHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEEEEEGGGGTSCTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEEEecCcccCCCCCCCCHHHHHHHHHHHHHH
Confidence 45677888999999887654 567889999999887665443321 111 1123444444
Q ss_pred HHh-----cCEEEEcCCCccCCCC----CCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHh
Q 008112 337 ITA-----SDGAMVARGDLGAELP----IEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVRE 407 (577)
Q Consensus 337 l~~-----sDGImIaRGDLg~elg----~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~ 407 (577)
++. ++.|.+..++-..+.. ++.+....+++...|.++|..+.+ |.+-.+...|..++.++...+
T Consensus 114 i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l-----En~~~~~~~~~~~~~~l~~~v-- 186 (295)
T 3cqj_A 114 IQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAM-----EIMDYPLMNSISKALGYAHYL-- 186 (295)
T ss_dssp HHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEE-----ECCSSGGGCSHHHHHHHHHHH--
T ss_pred HHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEE-----eeCCCcccCCHHHHHHHHHhc--
Confidence 433 5566554333211111 112334445566666677765543 333222334555555555544
Q ss_pred ccceEEecccc
Q 008112 408 GADAVMLSGET 418 (577)
Q Consensus 408 G~D~imLs~ET 418 (577)
|.+.+-+.-+|
T Consensus 187 ~~~~vg~~~D~ 197 (295)
T 3cqj_A 187 NNPWFQLYPDI 197 (295)
T ss_dssp CCTTEEEECBH
T ss_pred CCCCeEEEecc
Confidence 23334444343
No 123
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=71.52 E-value=15 Score=37.23 Aligned_cols=98 Identities=13% Similarity=0.140 Sum_probs=59.2
Q ss_pred HHHHHHhcCCCEEEEc------CCCCHHHHHHHHH-HHHhcCCCceEEEeec---ChhhHhhHHHHHHh-cCEEEEcCCC
Q 008112 281 DIKFGVDNKVDFYAVS------FVKDAQVVHELKN-YLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGD 349 (577)
Q Consensus 281 dI~~al~~gvD~I~~S------fV~sa~dv~~lr~-~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDGImIaRGD 349 (577)
.+++-++.|+|+|.+. +--|.++=.++.+ ..+..+.+++||+-+= |.++++....-.+. +|++|+-+-.
T Consensus 34 lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Py 113 (309)
T 3fkr_A 34 AVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPY 113 (309)
T ss_dssp HHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSC
T ss_pred HHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 3467788999999873 2234444444433 4445567899999863 55566555555444 8999997654
Q ss_pred cc--CCCCCCcHHHHHHHHHHHHHHcCCceEEEe
Q 008112 350 LG--AELPIEEVPLLQEEIIRTCRSMGKAVIVAT 381 (577)
Q Consensus 350 Lg--~elg~e~v~~~qk~Ii~~c~~aGKPvi~AT 381 (577)
.. ...+.+.+...-+. .|.+.+.|+++.-
T Consensus 114 y~~~~~~s~~~l~~~f~~---va~a~~lPiilYn 144 (309)
T 3fkr_A 114 HGATFRVPEAQIFEFYAR---VSDAIAIPIMVQD 144 (309)
T ss_dssp BTTTBCCCHHHHHHHHHH---HHHHCSSCEEEEE
T ss_pred CccCCCCCHHHHHHHHHH---HHHhcCCCEEEEe
Confidence 42 12233344444444 4555689998753
No 124
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=71.15 E-value=42 Score=31.31 Aligned_cols=111 Identities=14% Similarity=0.191 Sum_probs=66.5
Q ss_pred CCCCccCHHH----HHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceE-EEeecChhhHhhHHHHHHh-cCEEEE
Q 008112 272 PSITEKDWDD----IKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHV-IVKIESADSIPNLHSIITA-SDGAMV 345 (577)
Q Consensus 272 p~ltekD~~d----I~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~I-iaKIEt~~gv~NldeIl~~-sDGImI 345 (577)
|.+...|.++ ++.+.+.|+++|-+-. .+++.++.++++....+.++.| ...+.+. +.++..++. +|+|.+
T Consensus 11 ~~i~~~d~~~~~~~~~~~~~~G~~~i~l~~-~~~~~~~~i~~i~~~~~~~l~vg~g~~~~~---~~i~~a~~~Gad~V~~ 86 (212)
T 2v82_A 11 AILRGITPDEALAHVGAVIDAGFDAVEIPL-NSPQWEQSIPAIVDAYGDKALIGAGTVLKP---EQVDALARMGCQLIVT 86 (212)
T ss_dssp EECTTCCHHHHHHHHHHHHHHTCCEEEEET-TSTTHHHHHHHHHHHHTTTSEEEEECCCSH---HHHHHHHHTTCCEEEC
T ss_pred EEEeCCCHHHHHHHHHHHHHCCCCEEEEeC-CChhHHHHHHHHHHhCCCCeEEEeccccCH---HHHHHHHHcCCCEEEe
Confidence 3444444444 4556678999998743 4555666666665544433332 0233333 356666665 899974
Q ss_pred cCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEe
Q 008112 346 ARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML 414 (577)
Q Consensus 346 aRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imL 414 (577)
+- .. ..+++.+++.|.++++.+ .|..| +..+...|+|.+.+
T Consensus 87 ~~---------~~-----~~~~~~~~~~g~~~~~g~-----------~t~~e---~~~a~~~G~d~v~v 127 (212)
T 2v82_A 87 PN---------IH-----SEVIRRAVGYGMTVCPGC-----------ATATE---AFTALEAGAQALKI 127 (212)
T ss_dssp SS---------CC-----HHHHHHHHHTTCEEECEE-----------CSHHH---HHHHHHTTCSEEEE
T ss_pred CC---------CC-----HHHHHHHHHcCCCEEeec-----------CCHHH---HHHHHHCCCCEEEE
Confidence 32 11 345778899999876531 24444 45677899999987
No 125
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=70.99 E-value=66 Score=32.88 Aligned_cols=150 Identities=13% Similarity=0.043 Sum_probs=91.4
Q ss_pred CCCccCHHHHHH-HHhcCCCEEEE-----cCCCC-------HHHHHHHHHHHHhcCCCceEEEee-cChhhHhhHHHHHH
Q 008112 273 SITEKDWDDIKF-GVDNKVDFYAV-----SFVKD-------AQVVHELKNYLKSCGADIHVIVKI-ESADSIPNLHSIIT 338 (577)
Q Consensus 273 ~ltekD~~dI~~-al~~gvD~I~~-----SfV~s-------a~dv~~lr~~l~~~~~~i~IiaKI-Et~~gv~NldeIl~ 338 (577)
.++..+...|.. ..+.|+|.|=+ ++..| +.+.+.++... +...++++.+.. -+..-.+.++...+
T Consensus 26 ~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~-~~~~~~~i~~l~~p~~~~~~~i~~a~~ 104 (345)
T 1nvm_A 26 QYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVA-GEISHAQIATLLLPGIGSVHDLKNAYQ 104 (345)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHH-TTCSSSEEEEEECBTTBCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHH-hhCCCCEEEEEecCCcccHHHHHHHHh
Confidence 345556555544 45689999988 34322 33444454443 334567777662 21111334555454
Q ss_pred h-cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhccceEEecc
Q 008112 339 A-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSG 416 (577)
Q Consensus 339 ~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~D~imLs~ 416 (577)
. +|++.|. ++..++ ...+..++.|+++|+.+++.-. ..+.-+...+.+++. +...|+|.|.|.
T Consensus 105 aGvd~v~I~-------~~~s~~-~~~~~~i~~ak~~G~~v~~~~~------~a~~~~~e~~~~ia~~~~~~Ga~~i~l~- 169 (345)
T 1nvm_A 105 AGARVVRVA-------THCTEA-DVSKQHIEYARNLGMDTVGFLM------MSHMIPAEKLAEQGKLMESYGATCIYMA- 169 (345)
T ss_dssp HTCCEEEEE-------EETTCG-GGGHHHHHHHHHHTCEEEEEEE------STTSSCHHHHHHHHHHHHHHTCSEEEEE-
T ss_pred CCcCEEEEE-------EeccHH-HHHHHHHHHHHHCCCEEEEEEE------eCCCCCHHHHHHHHHHHHHCCCCEEEEC-
Confidence 4 8888874 222222 2346788899999999877521 223445566777777 555679999996
Q ss_pred ccCCCCCHHHHHHHHHHHHHHH
Q 008112 417 ETAHGKFPLKAVKVMHTVSLRT 438 (577)
Q Consensus 417 ETa~G~yP~eaV~~m~~I~~~a 438 (577)
+|.=...|.++-+.+..+.+..
T Consensus 170 DT~G~~~P~~v~~lv~~l~~~~ 191 (345)
T 1nvm_A 170 DSGGAMSMNDIRDRMRAFKAVL 191 (345)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHS
T ss_pred CCcCccCHHHHHHHHHHHHHhc
Confidence 5555556999888888887766
No 126
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=70.71 E-value=22 Score=35.46 Aligned_cols=109 Identities=17% Similarity=0.251 Sum_probs=71.5
Q ss_pred cCHHHHHHH-HhcCCCEEEEc-----CCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhh---HHHHHHh-cCEEEEc
Q 008112 277 KDWDDIKFG-VDNKVDFYAVS-----FVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPN---LHSIITA-SDGAMVA 346 (577)
Q Consensus 277 kD~~dI~~a-l~~gvD~I~~S-----fV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~N---ldeIl~~-sDGImIa 346 (577)
.|...+..+ .+.|+++|.+- |=-+.+++.++++.. +++|+.| +.+-| +++-.+. +|+|.++
T Consensus 72 ~~p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v-----~lPvl~k----dfiid~~qv~~A~~~GAD~VlLi 142 (272)
T 3qja_A 72 ADPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASV-----SIPVLRK----DFVVQPYQIHEARAHGADMLLLI 142 (272)
T ss_dssp -CHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHC-----SSCEEEE----SCCCSHHHHHHHHHTTCSEEEEE
T ss_pred CCHHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhC-----CCCEEEC----ccccCHHHHHHHHHcCCCEEEEe
Confidence 455666554 45799999763 223567888887643 5777766 23333 3444444 9999997
Q ss_pred CCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEecc
Q 008112 347 RGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG 416 (577)
Q Consensus 347 RGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ 416 (577)
-.||. +.-.++++..|+..|..+++.++ |..| +..+...|+|.+-.++
T Consensus 143 ~a~l~--------~~~l~~l~~~a~~lGl~~lvev~-----------t~ee---~~~A~~~Gad~IGv~~ 190 (272)
T 3qja_A 143 VAALE--------QSVLVSMLDRTESLGMTALVEVH-----------TEQE---ADRALKAGAKVIGVNA 190 (272)
T ss_dssp GGGSC--------HHHHHHHHHHHHHTTCEEEEEES-----------SHHH---HHHHHHHTCSEEEEES
T ss_pred cccCC--------HHHHHHHHHHHHHCCCcEEEEcC-----------CHHH---HHHHHHCCCCEEEECC
Confidence 66664 23356778999999999987553 3444 4456678999998874
No 127
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=70.65 E-value=7.3 Score=37.44 Aligned_cols=128 Identities=11% Similarity=0.121 Sum_probs=64.2
Q ss_pred CHHH-HHHHHhcCCCEEEE-----cCCCCHHHHHHHHHHHHhcCCCceEEEe--ecChhhHhhHHHHHHh-cCEEEEcCC
Q 008112 278 DWDD-IKFGVDNKVDFYAV-----SFVKDAQVVHELKNYLKSCGADIHVIVK--IESADSIPNLHSIITA-SDGAMVARG 348 (577)
Q Consensus 278 D~~d-I~~al~~gvD~I~~-----SfV~sa~dv~~lr~~l~~~~~~i~IiaK--IEt~~gv~NldeIl~~-sDGImIaRG 348 (577)
|... .+...+.|+|+|-+ .|+.+... ..+++..+. .++++++. |.+++ .+++.++. +|+|.+++.
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~--~~ipv~v~ggI~~~~---~~~~~l~~Gad~V~lg~~ 106 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQA--MDIKVELSGGIRDDD---TLAAALATGCTRVNLGTA 106 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHH--CSSEEEEESSCCSHH---HHHHHHHTTCSEEEECHH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHh--cCCcEEEECCcCCHH---HHHHHHHcCCCEEEECch
Confidence 5444 45567899999977 34444444 444443333 25667664 66654 46666666 999999866
Q ss_pred CccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhH-hh-hcCC---CCChHhHHHHHHHHHhccceEEeccccCCCCC
Q 008112 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLE-SM-IVHP---TPTRAEVSDIAIAVREGADAVMLSGETAHGKF 423 (577)
Q Consensus 349 DLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~Le-SM-~~~~---~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~y 423 (577)
.|.- |. .+.+..+..|..++++-.... .. ++.- .++. +..+..+...|+|.+.+++-+..|.+
T Consensus 107 ~l~~-------p~---~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~--~e~~~~~~~~G~~~i~~~~~~~~~~~ 174 (244)
T 1vzw_A 107 ALET-------PE---WVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDL--YETLDRLNKEGCARYVVTDIAKDGTL 174 (244)
T ss_dssp HHHC-------HH---HHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBH--HHHHHHHHHTTCCCEEEEEC------
T ss_pred HhhC-------HH---HHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCH--HHHHHHHHhCCCCEEEEeccCccccc
Confidence 5421 22 233333444544443322110 00 0000 1122 22244566789999998765555543
No 128
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=70.28 E-value=49 Score=33.47 Aligned_cols=132 Identities=14% Similarity=0.145 Sum_probs=77.6
Q ss_pred HHHHHHhcCCCEEEEc-CCCCH---HH---HHHHHHHHHhcCCCceEEEeecChhh---------HhhHHHHHHh--cCE
Q 008112 281 DIKFGVDNKVDFYAVS-FVKDA---QV---VHELKNYLKSCGADIHVIVKIESADS---------IPNLHSIITA--SDG 342 (577)
Q Consensus 281 dI~~al~~gvD~I~~S-fV~sa---~d---v~~lr~~l~~~~~~i~IiaKIEt~~g---------v~NldeIl~~--sDG 342 (577)
.++.+++.|+|.|.+- |+.+. +. +.++++.+.+. .+++|+ |++.| +...-.+... +|.
T Consensus 130 ~ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~--GlpvIi--e~~~G~~~~~d~e~i~~aariA~elGAD~ 205 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKV--GMPTMA--VTGVGKDMVRDQRYFSLATRIAAEMGAQI 205 (295)
T ss_dssp CHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTT--TCCEEE--EECC----CCSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHc--CCEEEE--ECCCCCccCCCHHHHHHHHHHHHHhCCCE
Confidence 4567889999987653 44443 22 33344444333 356654 55432 2222233333 787
Q ss_pred EEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCC
Q 008112 343 AMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGK 422 (577)
Q Consensus 343 ImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~ 422 (577)
|=... +.+. .+++.+.| ..||+++-..- .+++.=...+..++..|++++...-....-.
T Consensus 206 VKt~~-------t~e~----~~~vv~~~---~vPVv~~GG~~-------~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~ 264 (295)
T 3glc_A 206 IKTYY-------VEKG----FERIVAGC---PVPIVIAGGKK-------LPEREALEMCWQAIDQGASGVDMGRNIFQSD 264 (295)
T ss_dssp EEEEC-------CTTT----HHHHHHTC---SSCEEEECCSC-------CCHHHHHHHHHHHHHTTCSEEEESHHHHTSS
T ss_pred EEeCC-------CHHH----HHHHHHhC---CCcEEEEECCC-------CCHHHHHHHHHHHHHhCCeEEEeHHHHhcCc
Confidence 77651 1122 24444433 68988654311 1233334556788999999999876666667
Q ss_pred CHHHHHHHHHHHHHH
Q 008112 423 FPLKAVKVMHTVSLR 437 (577)
Q Consensus 423 yP~eaV~~m~~I~~~ 437 (577)
.|.+.++.+..+.++
T Consensus 265 dp~~~~~al~~ivh~ 279 (295)
T 3glc_A 265 HPVAMMKAVQAVVHH 279 (295)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhC
Confidence 899999999998775
No 129
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=69.81 E-value=39 Score=31.30 Aligned_cols=99 Identities=18% Similarity=0.229 Sum_probs=60.6
Q ss_pred HHHHhcCCCEEEEcCCC-CH-HHHHHHHHHHHhcCCCceEEE-eecChhhHhhHHHHHHh-cCEEEEcCCCccCCCCCCc
Q 008112 283 KFGVDNKVDFYAVSFVK-DA-QVVHELKNYLKSCGADIHVIV-KIESADSIPNLHSIITA-SDGAMVARGDLGAELPIEE 358 (577)
Q Consensus 283 ~~al~~gvD~I~~SfV~-sa-~dv~~lr~~l~~~~~~i~Iia-KIEt~~gv~NldeIl~~-sDGImIaRGDLg~elg~e~ 358 (577)
+...+.|+++|-+.+-. .+ +.++++|+.+. .+..|-+ .+.|++ .+++..+. +|+| ++++- +
T Consensus 29 ~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~---~~~~ig~~~v~~~~---~~~~a~~~Gad~i-v~~~~-----~--- 93 (205)
T 1wa3_A 29 LAVFEGGVHLIEITFTVPDADTVIKELSFLKE---KGAIIGAGTVTSVE---QCRKAVESGAEFI-VSPHL-----D--- 93 (205)
T ss_dssp HHHHHTTCCEEEEETTSTTHHHHHHHTHHHHH---TTCEEEEESCCSHH---HHHHHHHHTCSEE-ECSSC-----C---
T ss_pred HHHHHCCCCEEEEeCCChhHHHHHHHHHHHCC---CCcEEEecccCCHH---HHHHHHHcCCCEE-EcCCC-----C---
Confidence 34456799999775422 22 23666666553 2344433 344443 33333333 8999 77651 1
Q ss_pred HHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 359 VPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 359 v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
..+++.|++.|+|++.-. .|.. ++..++..|+|.+-+.
T Consensus 94 -----~~~~~~~~~~g~~vi~g~-----------~t~~---e~~~a~~~Gad~vk~~ 131 (205)
T 1wa3_A 94 -----EEISQFCKEKGVFYMPGV-----------MTPT---ELVKAMKLGHTILKLF 131 (205)
T ss_dssp -----HHHHHHHHHHTCEEECEE-----------CSHH---HHHHHHHTTCCEEEET
T ss_pred -----HHHHHHHHHcCCcEECCc-----------CCHH---HHHHHHHcCCCEEEEc
Confidence 468889999999998521 2433 4668899999998774
No 130
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=69.57 E-value=49 Score=30.83 Aligned_cols=130 Identities=8% Similarity=0.015 Sum_probs=69.9
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEcCCCccCCCCCCc
Q 008112 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEE 358 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIaRGDLg~elg~e~ 358 (577)
.++++.+++.|+|+|.++. .+.+- .+.....|. .++.-+.|++-+. .....-+|.|.+-+++ ..++
T Consensus 70 ~~~i~~a~~~Gad~V~~~~-~~~~~----~~~~~~~g~--~~~~g~~t~~e~~--~a~~~G~d~v~v~~t~---~~g~-- 135 (212)
T 2v82_A 70 PEQVDALARMGCQLIVTPN-IHSEV----IRRAVGYGM--TVCPGCATATEAF--TALEAGAQALKIFPSS---AFGP-- 135 (212)
T ss_dssp HHHHHHHHHTTCCEEECSS-CCHHH----HHHHHHTTC--EEECEECSHHHHH--HHHHTTCSEEEETTHH---HHCH--
T ss_pred HHHHHHHHHcCCCEEEeCC-CCHHH----HHHHHHcCC--CEEeecCCHHHHH--HHHHCCCCEEEEecCC---CCCH--
Confidence 3578889999999998664 23322 233444443 3333344433221 1111128999874432 1121
Q ss_pred HHHHHHHHHHHHHHc--CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCC----CCHHHHHHHHH
Q 008112 359 VPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHG----KFPLKAVKVMH 432 (577)
Q Consensus 359 v~~~qk~Ii~~c~~a--GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G----~yP~eaV~~m~ 432 (577)
+.+-+.++.. +.|++....+ +. .++..+...|+|++.+..--..+ .-|.++++.+.
T Consensus 136 -----~~~~~l~~~~~~~ipvia~GGI----------~~---~~i~~~~~~Ga~gv~vGsai~~~~~~~~d~~~~~~~l~ 197 (212)
T 2v82_A 136 -----QYIKALKAVLPSDIAVFAVGGV----------TP---ENLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAAFV 197 (212)
T ss_dssp -----HHHHHHHTTSCTTCEEEEESSC----------CT---TTHHHHHHHTCSEEEECTTTCCTTCCHHHHHHHHHHHH
T ss_pred -----HHHHHHHHhccCCCeEEEeCCC----------CH---HHHHHHHHcCCCEEEEChHHhCCCCCHHHHHHHHHHHH
Confidence 1222222333 3787764332 21 34667777899999986432222 35778888887
Q ss_pred HHHHHHhc
Q 008112 433 TVSLRTEA 440 (577)
Q Consensus 433 ~I~~~aE~ 440 (577)
+.++++-+
T Consensus 198 ~~~~~~~~ 205 (212)
T 2v82_A 198 KAYREAVQ 205 (212)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77766543
No 131
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=69.05 E-value=29 Score=34.83 Aligned_cols=98 Identities=7% Similarity=0.068 Sum_probs=61.2
Q ss_pred HHHHHHHhcCCCEEEE------cCCCCHHHHHHHHHHH-HhcCCCceEEEeecC---hhhHhhHHHHHHh-cCEEEEcCC
Q 008112 280 DDIKFGVDNKVDFYAV------SFVKDAQVVHELKNYL-KSCGADIHVIVKIES---ADSIPNLHSIITA-SDGAMVARG 348 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~------SfV~sa~dv~~lr~~l-~~~~~~i~IiaKIEt---~~gv~NldeIl~~-sDGImIaRG 348 (577)
+.+++-++.|+|+|.+ .+.-|.++=.++.+.. +..+.+++||+-+=+ .++++......+. +|++|+-+-
T Consensus 28 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 107 (294)
T 3b4u_A 28 AHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPP 107 (294)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 4456778899999986 3445555555555544 444567889998744 6666666655555 999999765
Q ss_pred CccCCCCCCcHHHHHHHHHHHHHHc---CCceEEE
Q 008112 349 DLGAELPIEEVPLLQEEIIRTCRSM---GKAVIVA 380 (577)
Q Consensus 349 DLg~elg~e~v~~~qk~Ii~~c~~a---GKPvi~A 380 (577)
.+.-..+.+.+...-+.| |.+. +.|+++.
T Consensus 108 ~y~~~~s~~~l~~~f~~v---a~a~p~~~lPiilY 139 (294)
T 3b4u_A 108 SYFKNVSDDGLFAWFSAV---FSKIGKDARDILVY 139 (294)
T ss_dssp CSSCSCCHHHHHHHHHHH---HHHHCTTCCCEEEE
T ss_pred cCCCCCCHHHHHHHHHHH---HHhcCCCCCcEEEE
Confidence 543212223344444444 4555 7999875
No 132
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=68.86 E-value=3.3 Score=38.31 Aligned_cols=129 Identities=21% Similarity=0.212 Sum_probs=74.6
Q ss_pred eecCCCCcccccccccccccccccccccccccCCCCCCCCcEEEEecCCCCCCHHHHHHHHHhCCcEEEEeccCCCh---
Q 008112 70 VPVSPEDVPKRDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDH--- 146 (577)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~--- 146 (577)
.|++|+.-+.|+++|++|..... ++..+.+-.| -+||+.
T Consensus 4 ~~lT~~g~~~L~~EL~~L~~~~R------------------------------~~i~~~i~~A--------r~~GDlsEN 45 (158)
T 2p4v_A 4 PLVTREGYEKLKQELNYLWREER------------------------------PEVTKKVTWA--------ASLGDRSEN 45 (158)
T ss_dssp CEECHHHHHHHHHHHHHHHHTHH------------------------------HHHHHHHHHH--------HHHSCTTTC
T ss_pred ccccHHHHHHHHHHHHHHHhcch------------------------------HHHHHHHHHH--------HhCCCcccc
Confidence 35788888888888888866544 2233333333 344442
Q ss_pred -------HHHHHHHHHHHHHHHhcCCCeeEEEeecC---CCeeEEeecCCcEEE--cCCCEEEEEEe---cCCCCceEEe
Q 008112 147 -------ASHQKVIDLVKEYNAQSKDNVIAIMLDTK---GPEVRSGDLPQPITL--TSGQEFTFTIQ---RGVGSAECVS 211 (577)
Q Consensus 147 -------e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~---GpkiR~g~~~~~i~L--~~G~~v~lt~~---~~~~~~~~i~ 211 (577)
+....+=..|+++.+.+. -+-++|.. +-++..|.. +.| ..|+..++++- ......+.|+
T Consensus 46 aeY~aak~~q~~~e~rI~~L~~~L~---~A~vid~~~~~~~~V~~Gs~---V~l~~~~g~~~~y~iVg~~ead~~~~~IS 119 (158)
T 2p4v_A 46 ADYQYNKKRLREIDRRVRYLTKCME---NLKIVDYSPQQEGKVFFGAW---VEIENDDGVTHRFRIVGYDEIFGRKDYIS 119 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH---HCEECCCCSSSCSSCSSSCE---EEEECTTCCCEEEEBCCSTTCCSSSCCBC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHh---hCeecCCccCCCCEEeccEE---EEEEECCCCEEEEEEECHHHcCccCCeec
Confidence 222333334555555553 23444442 345555543 556 35777776652 1223345677
Q ss_pred ccccc--cccccCCCCEEEEe--CCeEEEEEEEEe
Q 008112 212 VNYDD--FVNDVEVGDMLLVD--GGMMSLLVKSKT 242 (577)
Q Consensus 212 v~~~~--~~~~v~~Gd~I~id--DG~i~l~V~~v~ 242 (577)
+..|- -+-.-++||.|-+. +|...++|.++.
T Consensus 120 ~~SPlg~ALlGk~vGD~v~v~~P~G~~~~~I~~I~ 154 (158)
T 2p4v_A 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 (158)
T ss_dssp TTSHHHHHSTTCCTTCEEEEECSSCEEEEEEEEEE
T ss_pred CCCHHHHHhcCCCCCCEEEEEcCCCcEEEEEEEEE
Confidence 77661 22346899999998 889999999886
No 133
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=68.26 E-value=36 Score=32.97 Aligned_cols=111 Identities=9% Similarity=0.035 Sum_probs=71.3
Q ss_pred CccCHHHHHHH-HhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecC-h--------hhHhhHHHHHHh-cCEE
Q 008112 275 TEKDWDDIKFG-VDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIES-A--------DSIPNLHSIITA-SDGA 343 (577)
Q Consensus 275 tekD~~dI~~a-l~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt-~--------~gv~NldeIl~~-sDGI 343 (577)
++.+...+..+ .+.|+.+|.+ .+.++++++|+.. +++|+..+-. . .-++.+++..+. +|.|
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-----~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I 105 (229)
T 3q58_A 34 KPEIVAAMAQAAASAGAVAVRI---EGIENLRTVRPHL-----SVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADII 105 (229)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHGGGC-----CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEE
T ss_pred CcchHHHHHHHHHHCCCcEEEE---CCHHHHHHHHHhc-----CCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEE
Confidence 44555666554 4579999876 5889998888754 5677653211 0 123456676666 9998
Q ss_pred EEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEe
Q 008112 344 MVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML 414 (577)
Q Consensus 344 mIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imL 414 (577)
.+.-..+ ...+ ..+++++.+++.|.+++.-.. |..| ...+...|+|.|-.
T Consensus 106 ~l~~~~~---~~p~----~l~~~i~~~~~~g~~v~~~v~-----------t~ee---a~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 106 AFDASFR---SRPV----DIDSLLTRIRLHGLLAMADCS-----------TVNE---GISCHQKGIEFIGT 155 (229)
T ss_dssp EEECCSS---CCSS----CHHHHHHHHHHTTCEEEEECS-----------SHHH---HHHHHHTTCSEEEC
T ss_pred EECcccc---CChH----HHHHHHHHHHHCCCEEEEecC-----------CHHH---HHHHHhCCCCEEEe
Confidence 8753321 1222 346778888889999887432 4444 45778899999963
No 134
>1grj_A GREA protein; transcript elongation factor, transcript cleavage factor, transcription regulation; 2.20A {Escherichia coli} SCOP: a.2.1.1 d.26.1.2
Probab=68.17 E-value=1.2 Score=41.29 Aligned_cols=129 Identities=23% Similarity=0.282 Sum_probs=73.3
Q ss_pred eecCCCCcccccccccccccccccccccccccCCCCCCCCcEEEEecCCCCCCHHHHHHHHHhCCcEEEEeccCCChHHH
Q 008112 70 VPVSPEDVPKRDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASH 149 (577)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~ 149 (577)
+|++|+.-+.|+++|+||..... ++.++..-.| -+||+..+.
T Consensus 4 ~~~T~~g~~~L~~El~~L~~~~r------------------------------p~i~~~i~~A--------~~~gDlsEN 45 (158)
T 1grj_A 4 IPMTLRGAEKLREELDFLKSVRR------------------------------PEIIAAIAEA--------REHGDLKEN 45 (158)
T ss_dssp EEEEHHHHHHHHHHHHHHHHTHH------------------------------HHHHHHHHHH--------HTTCCGGGC
T ss_pred cccCHHHHHHHHHHHHHHHhccc------------------------------hhhHhhHHHH--------Hhccccccc
Confidence 46788888888888888876544 3445555444 456664222
Q ss_pred HH----------HHHHHHHHHHhcCCCeeEEEeecC----CCeeEEeecCCcEEEc---CCCEEEEEEe--cC-CCCceE
Q 008112 150 QK----------VIDLVKEYNAQSKDNVIAIMLDTK----GPEVRSGDLPQPITLT---SGQEFTFTIQ--RG-VGSAEC 209 (577)
Q Consensus 150 ~~----------~i~~ir~~~~~~~~~~i~I~~Dl~----GpkiR~g~~~~~i~L~---~G~~v~lt~~--~~-~~~~~~ 209 (577)
.+ +=..|+++.+.+. -+-.+|.. ..++..|.. +.++ .|+..++++- .. ....+.
T Consensus 46 aeY~aak~~q~~~e~ri~~Le~~L~---~a~vid~~~~~~~~~V~~Gs~---V~l~~~~~~~~~~y~iVg~~ead~~~~~ 119 (158)
T 1grj_A 46 AEYHAAREQQGFCEGRIKDIEAKLS---NAQVIDVTKMPNNGRVIFGAT---VTVLNLDSDEEQTYRIVGDDEADFKQNL 119 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH---HEEEECGGGSCCCSBCCTTCE---EEEEETTTTEEEEEEEECTTTCBGGGTE
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHh---hCeecCccccCCCCEEEeCcE---EEEEECCCCCEEEEEEECHHHhCCcCCE
Confidence 21 2234666666654 24445543 234554433 5553 5666665543 11 123457
Q ss_pred Eeccccc--cccccCCCCEEEEe--CCeEEEEEEEEe
Q 008112 210 VSVNYDD--FVNDVEVGDMLLVD--GGMMSLLVKSKT 242 (577)
Q Consensus 210 i~v~~~~--~~~~v~~Gd~I~id--DG~i~l~V~~v~ 242 (577)
|++..|- -+-.-++||.|.+. +|...++|.++.
T Consensus 120 IS~~SPlG~ALlGk~~GD~v~v~~p~G~~~~~I~~I~ 156 (158)
T 1grj_A 120 ISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 (158)
T ss_dssp EESSSHHHHHHTTCBTTCEECC------CCEEEEEEE
T ss_pred EcCCCHHHHHHcCCCCCCEEEEEcCCCcEEEEEEEEE
Confidence 8887762 22356899999887 888888888875
No 135
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=67.87 E-value=22 Score=36.18 Aligned_cols=96 Identities=9% Similarity=0.085 Sum_probs=59.4
Q ss_pred HHHHHHhcCCCEEEEc------CCCCHHHHHHHHH-HHHhcCCCceEEEeec---ChhhHhhHHHHHHh-cCEEEEcCCC
Q 008112 281 DIKFGVDNKVDFYAVS------FVKDAQVVHELKN-YLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGD 349 (577)
Q Consensus 281 dI~~al~~gvD~I~~S------fV~sa~dv~~lr~-~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDGImIaRGD 349 (577)
.+++-++.|+|+|.+. +--|.++=.++.+ ..+..+.+++||+-+= |.++++......+. +|++|+-+-.
T Consensus 49 lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~ 128 (314)
T 3qze_A 49 LVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPY 128 (314)
T ss_dssp HHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 3467788999999873 3334555444444 3455567799999764 46666666555555 9999987544
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 350 Lg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
+.- ...+.+...-+.| |.+.+.|+++.
T Consensus 129 y~~-~s~~~l~~~f~~v---a~a~~lPiilY 155 (314)
T 3qze_A 129 YNK-PTQEGMYQHFRHI---AEAVAIPQILY 155 (314)
T ss_dssp SSC-CCHHHHHHHHHHH---HHHSCSCEEEE
T ss_pred CCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 421 1223344444444 45569999985
No 136
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=67.69 E-value=44 Score=32.24 Aligned_cols=144 Identities=17% Similarity=0.145 Sum_probs=83.2
Q ss_pred HHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEee-c------C----hhhHhhHHHHHHh-----cCEE
Q 008112 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKI-E------S----ADSIPNLHSIITA-----SDGA 343 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKI-E------t----~~gv~NldeIl~~-----sDGI 343 (577)
+.++++.+.|+|+|=+....-.+++.++++.+.+.|-.+..+.-- . . .++++.+...++. ++.|
T Consensus 42 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v 121 (287)
T 3kws_A 42 EKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGV 121 (287)
T ss_dssp HHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 557788899999999988767889999999997766544322210 0 1 1344555555543 6677
Q ss_pred EEcCCCccC--CCC-----CCcHHHHHHHHHHHHHHcCCceEEEehhhHhh---hcCCCCChHhHHHHHHHHHhccceEE
Q 008112 344 MVARGDLGA--ELP-----IEEVPLLQEEIIRTCRSMGKAVIVATNMLESM---IVHPTPTRAEVSDIAIAVREGADAVM 413 (577)
Q Consensus 344 mIaRGDLg~--elg-----~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM---~~~~~PtrAEv~Dv~nav~~G~D~im 413 (577)
.+..|.-.. ..| ++.+....+++...|+++|..+.+ |.+ ..+...|..++.++...+. .+.+-
T Consensus 122 ~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l-----E~~~~~~~~~~~~~~~~~~ll~~v~--~~~vg 194 (287)
T 3kws_A 122 IIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIF-----EPLNRKECFYLRQVADAASLCRDIN--NPGVR 194 (287)
T ss_dssp EECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEE-----CCCCTTTCSSCCCHHHHHHHHHHHC--CTTEE
T ss_pred EEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEE-----EecCcccCcccCCHHHHHHHHHHcC--CCCee
Confidence 776552211 121 123455556778888888987664 322 1223456666666666542 34444
Q ss_pred eccccC----CCCCHHHHHHH
Q 008112 414 LSGETA----HGKFPLKAVKV 430 (577)
Q Consensus 414 Ls~ETa----~G~yP~eaV~~ 430 (577)
+.-+|. .|.-|.+.++.
T Consensus 195 ~~~D~~h~~~~g~d~~~~l~~ 215 (287)
T 3kws_A 195 CMGDFWHMTWEETSDMGAFIS 215 (287)
T ss_dssp EEEEHHHHHHHCSCHHHHHHH
T ss_pred EEeehHHHHhcCCCHHHHHHH
Confidence 433432 25555555443
No 137
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=67.58 E-value=53 Score=32.38 Aligned_cols=113 Identities=18% Similarity=0.252 Sum_probs=62.6
Q ss_pred cCCCEEEEcCC------------CCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHH----Hh-cCEEEEcCCCc
Q 008112 288 NKVDFYAVSFV------------KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSII----TA-SDGAMVARGDL 350 (577)
Q Consensus 288 ~gvD~I~~SfV------------~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl----~~-sDGImIaRGDL 350 (577)
.|+|+|-+.|- .+++.+.++.+.+.+. -+.+++.|+= + ++.++.+++ +. +|+|.+.-+..
T Consensus 124 ~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~-~~~pv~vk~~-~-~~~~~~~~a~~l~~~G~d~i~v~~~~~ 200 (311)
T 1ep3_A 124 ANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAV-SKVPLYVKLS-P-NVTDIVPIAKAVEAAGADGLTMINTLM 200 (311)
T ss_dssp TTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHH-CSSCEEEEEC-S-CSSCSHHHHHHHHHTTCSEEEECCCEE
T ss_pred CCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHh-cCCCEEEEEC-C-ChHHHHHHHHHHHHcCCCEEEEeCCCc
Confidence 79999876442 3555556665555543 1577888874 1 223333433 23 89999832111
Q ss_pred cCC-----------------CCCCcHHHHHHHHHHHHH-HcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceE
Q 008112 351 GAE-----------------LPIEEVPLLQEEIIRTCR-SMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAV 412 (577)
Q Consensus 351 g~e-----------------lg~e~v~~~qk~Ii~~c~-~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~i 412 (577)
+.. .+....+.. -..+..++ ...+|+|.+..+- + ..|+..++..|+|++
T Consensus 201 g~~i~~~~~~~~~~~~~~g~~g~~~~~~~-~~~i~~i~~~~~ipvia~GGI~---------~---~~d~~~~l~~GAd~V 267 (311)
T 1ep3_A 201 GVRFDLKTRQPILANITGGLSGPAIKPVA-LKLIHQVAQDVDIPIIGMGGVA---------N---AQDVLEMYMAGASAV 267 (311)
T ss_dssp ECCBCTTTCSBSSTTSCEEEESGGGHHHH-HHHHHHHHTTCSSCEEECSSCC---------S---HHHHHHHHHHTCSEE
T ss_pred ccccCcccCCccccCCCCcccCccchHHH-HHHHHHHHHhcCCCEEEECCcC---------C---HHHHHHHHHcCCCEE
Confidence 110 011122222 23343333 4488988754432 2 346778888999999
Q ss_pred Eecc
Q 008112 413 MLSG 416 (577)
Q Consensus 413 mLs~ 416 (577)
++..
T Consensus 268 ~vg~ 271 (311)
T 1ep3_A 268 AVGT 271 (311)
T ss_dssp EECT
T ss_pred EECH
Confidence 9863
No 138
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=67.23 E-value=48 Score=32.07 Aligned_cols=111 Identities=8% Similarity=0.036 Sum_probs=71.1
Q ss_pred CccCHHHHHHH-HhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEE--eecCh-------hhHhhHHHHHHh-cCEE
Q 008112 275 TEKDWDDIKFG-VDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIV--KIESA-------DSIPNLHSIITA-SDGA 343 (577)
Q Consensus 275 tekD~~dI~~a-l~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~Iia--KIEt~-------~gv~NldeIl~~-sDGI 343 (577)
++.+...+..+ .+.|+.+|.+ .+.++++++|+.. +++|+. |.+-. .-++.+++.++. +|.|
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-----~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V 105 (232)
T 3igs_A 34 KPEIVAAMALAAEQAGAVAVRI---EGIDNLRMTRSLV-----SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAII 105 (232)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHHTTC-----CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEE
T ss_pred CcchHHHHHHHHHHCCCeEEEE---CCHHHHHHHHHhc-----CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEE
Confidence 45555666554 4579998876 5889998888643 566765 32210 123456666666 9999
Q ss_pred EEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEe
Q 008112 344 MVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML 414 (577)
Q Consensus 344 mIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imL 414 (577)
.+.-..+ ... ...+++++.++++|.+++.-.. |..| ...+...|+|.+..
T Consensus 106 ~l~~~~~---~~p----~~l~~~i~~~~~~g~~v~~~v~-----------t~ee---a~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 106 AVDGTAR---QRP----VAVEALLARIHHHHLLTMADCS-----------SVDD---GLACQRLGADIIGT 155 (232)
T ss_dssp EEECCSS---CCS----SCHHHHHHHHHHTTCEEEEECC-----------SHHH---HHHHHHTTCSEEEC
T ss_pred EECcccc---CCH----HHHHHHHHHHHHCCCEEEEeCC-----------CHHH---HHHHHhCCCCEEEE
Confidence 8753321 111 2456778888889999887432 4444 45778899999963
No 139
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=67.12 E-value=4 Score=39.78 Aligned_cols=144 Identities=15% Similarity=0.106 Sum_probs=84.9
Q ss_pred CCCCccCHHHH-HHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHH-------h-cCE
Q 008112 272 PSITEKDWDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT-------A-SDG 342 (577)
Q Consensus 272 p~ltekD~~dI-~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~-------~-sDG 342 (577)
|..|..|.+.+ +.+.+.|++.|+++ +..+...++.+. +.++.+.+-+=.+.|-.+.+..+. . +|.
T Consensus 14 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v~~~~~~l~--~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GAde 87 (220)
T 1ub3_A 14 PTATLEEVAKAAEEALEYGFYGLCIP----PSYVAWVRARYP--HAPFRLVTVVGFPLGYQEKEVKALEAALACARGADE 87 (220)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEECC----GGGHHHHHHHCT--TCSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhC--CCCceEEEEecCCCCCCchHHHHHHHHHHHHcCCCE
Confidence 55566665544 56788999999865 445666666663 446888888866665444433222 1 565
Q ss_pred EEE--cCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhccceEEeccccC
Q 008112 343 AMV--ARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSGETA 419 (577)
Q Consensus 343 ImI--aRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~D~imLs~ETa 419 (577)
|-+ ..|.|- +=.++.+..-.+.+.++|...+.|+|+.|-. +|..|+..... +...|+|.|=-|
T Consensus 88 vd~vinig~~~-~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~---------l~~e~i~~a~~ia~eaGADfVKTs---- 153 (220)
T 1ub3_A 88 VDMVLHLGRAK-AGDLDYLEAEVRAVREAVPQAVLKVILETGY---------FSPEEIARLAEAAIRGGADFLKTS---- 153 (220)
T ss_dssp EEEECCHHHHH-TTCHHHHHHHHHHHHHHSTTSEEEEECCGGG---------SCHHHHHHHHHHHHHHTCSEEECC----
T ss_pred EEecccchhhh-CCCHHHHHHHHHHHHHHHcCCCceEEEecCC---------CCHHHHHHHHHHHHHhCCCEEEeC----
Confidence 422 112110 0011223333344555555556677776554 36777776666 778899998765
Q ss_pred CCCC----HHHHHHHHHHHH
Q 008112 420 HGKF----PLKAVKVMHTVS 435 (577)
Q Consensus 420 ~G~y----P~eaV~~m~~I~ 435 (577)
.|.. -.+.|+.|+++.
T Consensus 154 TGf~~~gat~~dv~~m~~~v 173 (220)
T 1ub3_A 154 TGFGPRGASLEDVALLVRVA 173 (220)
T ss_dssp CSSSSCCCCHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHhh
Confidence 4444 458899998764
No 140
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=66.40 E-value=6.9 Score=39.69 Aligned_cols=65 Identities=15% Similarity=0.171 Sum_probs=50.1
Q ss_pred CHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhh--HhhHHHHHHh-cCEEEEcC
Q 008112 278 DWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADS--IPNLHSIITA-SDGAMVAR 347 (577)
Q Consensus 278 D~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~g--v~NldeIl~~-sDGImIaR 347 (577)
+.+.++.+++.|+|+|.+... ++++++++++.+...+.++++.+ --| .+|+.++++. +|+|-+|.
T Consensus 202 tleea~eA~~aGaD~I~LDn~-~~e~l~~av~~l~~~~~~v~ieA----SGGIt~eni~~~a~tGVD~IsvGs 269 (285)
T 1o4u_A 202 NLEDALRAVEAGADIVMLDNL-SPEEVKDISRRIKDINPNVIVEV----SGGITEENVSLYDFETVDVISSSR 269 (285)
T ss_dssp SHHHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHHHHCTTSEEEE----EECCCTTTGGGGCCTTCCEEEEGG
T ss_pred CHHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCceEEE----ECCCCHHHHHHHHHcCCCEEEEeH
Confidence 578888999999999999984 88999999998876444554433 223 3577777777 99999985
No 141
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=66.29 E-value=35 Score=34.11 Aligned_cols=149 Identities=17% Similarity=0.270 Sum_probs=76.7
Q ss_pred eCCCCCCCCCCCccCHHHHHHHHhcCCCEE--EEcC---------CCCHH-----------HHHHHHHHHHhcCCCceEE
Q 008112 264 VRGKSATLPSITEKDWDDIKFGVDNKVDFY--AVSF---------VKDAQ-----------VVHELKNYLKSCGADIHVI 321 (577)
Q Consensus 264 lp~~~~~lp~ltekD~~dI~~al~~gvD~I--~~Sf---------V~sa~-----------dv~~lr~~l~~~~~~i~Ii 321 (577)
+|-.....|.+. .-.+.++...+.|+|+| .+|| ++.+. ++-++.+.+++.+.+++++
T Consensus 23 i~yi~aGdP~~~-~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Piv 101 (271)
T 3nav_A 23 VPFVTIGDPNPE-QSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIG 101 (271)
T ss_dssp EEEEETTSSCHH-HHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEE
T ss_pred EEEEeCCCCCHH-HHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 443334445432 23455555567899984 7778 44322 2222223334434567777
Q ss_pred Eee-cC---hhhHhhHHHHHH-h-cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceE-EEehhhHhhhcCCCCC
Q 008112 322 VKI-ES---ADSIPNLHSIIT-A-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVI-VATNMLESMIVHPTPT 394 (577)
Q Consensus 322 aKI-Et---~~gv~NldeIl~-~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi-~ATq~LeSM~~~~~Pt 394 (577)
.+. .+ .-|++++-+-+. + +||+++. ++|+++ ..+....|+++|...+ +. .|..+
T Consensus 102 lm~Y~n~v~~~g~~~f~~~~~~aGvdGvIip------Dlp~ee----~~~~~~~~~~~gl~~I~lv---------ap~t~ 162 (271)
T 3nav_A 102 LLMYANLVYARGIDDFYQRCQKAGVDSVLIA------DVPTNE----SQPFVAAAEKFGIQPIFIA---------PPTAS 162 (271)
T ss_dssp EEECHHHHHHTCHHHHHHHHHHHTCCEEEET------TSCGGG----CHHHHHHHHHTTCEEEEEE---------CTTCC
T ss_pred EEecCcHHHHHhHHHHHHHHHHCCCCEEEEC------CCCHHH----HHHHHHHHHHcCCeEEEEE---------CCCCC
Confidence 652 22 135665544443 3 9999994 455554 4668889999998754 33 23333
Q ss_pred hHhHHHHHHHHHhccceEEe---ccccCC-CCCHHHHHHHHHHHH
Q 008112 395 RAEVSDIAIAVREGADAVML---SGETAH-GKFPLKAVKVMHTVS 435 (577)
Q Consensus 395 rAEv~Dv~nav~~G~D~imL---s~ETa~-G~yP~eaV~~m~~I~ 435 (577)
.+ .+......+.+.+.+ .|=|-. ...|.+.-+.+.++-
T Consensus 163 ~e---ri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr 204 (271)
T 3nav_A 163 DE---TLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQ 204 (271)
T ss_dssp HH---HHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHH
T ss_pred HH---HHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHH
Confidence 33 344455556666665 222211 124544445555553
No 142
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=66.27 E-value=8.9 Score=41.61 Aligned_cols=50 Identities=22% Similarity=0.385 Sum_probs=42.8
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHH
Q 008112 109 KTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKE 158 (577)
Q Consensus 109 ~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~ 158 (577)
+-.+-+.+|....+.+.++.|+++|+++.=||++|+..+.+.++++.+|+
T Consensus 219 rL~v~aavG~~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~ 268 (496)
T 4fxs_A 219 RLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRA 268 (496)
T ss_dssp CBCCEEECCSSSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred ceeeeeeeccccchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHH
Confidence 45667788988889999999999999999999999988777777776664
No 143
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=66.27 E-value=19 Score=36.43 Aligned_cols=96 Identities=20% Similarity=0.131 Sum_probs=57.9
Q ss_pred HHHHHHhcCCCEEEEc------CCCCHHHHHHHHH-HHHhcCCCceEEEeec---ChhhHhhHHHHHHh-cCEEEEcCCC
Q 008112 281 DIKFGVDNKVDFYAVS------FVKDAQVVHELKN-YLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGD 349 (577)
Q Consensus 281 dI~~al~~gvD~I~~S------fV~sa~dv~~lr~-~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDGImIaRGD 349 (577)
.+++-++.|+|+|.+. +--|.++=.++.+ ..+..+.+++||+-+= |.++++......+. +|++|+-+-.
T Consensus 41 lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 120 (304)
T 3l21_A 41 LANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPY 120 (304)
T ss_dssp HHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 3567788999998763 2234444444444 3445567899999873 45555555555444 9999987544
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 350 Lg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
+.- .. -..+.+..-..|.+.+.|+++.
T Consensus 121 y~~-~s---~~~l~~~f~~va~a~~lPiilY 147 (304)
T 3l21_A 121 YSK-PP---QRGLQAHFTAVADATELPMLLY 147 (304)
T ss_dssp SSC-CC---HHHHHHHHHHHHTSCSSCEEEE
T ss_pred CCC-CC---HHHHHHHHHHHHHhcCCCEEEE
Confidence 322 12 2233334444455569999975
No 144
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=66.22 E-value=98 Score=30.92 Aligned_cols=124 Identities=12% Similarity=0.102 Sum_probs=77.8
Q ss_pred HHHHHhcCCCEEEEcCC----------C-CHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEcCCCc
Q 008112 282 IKFGVDNKVDFYAVSFV----------K-DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDL 350 (577)
Q Consensus 282 I~~al~~gvD~I~~SfV----------~-sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIaRGDL 350 (577)
++.+.+.|+|.+-+-+- . ..+.++.++++..+. .+.+++-+-..+.++-+.+. +|.+-||-+++
T Consensus 58 a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~~---vd~~kIgs~~~ 132 (276)
T 1vs1_A 58 ALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEA--GLPVVTEVLDPRHVETVSRY---ADMLQIGARNM 132 (276)
T ss_dssp HHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCCEEEECCCGGGHHHHHHH---CSEEEECGGGT
T ss_pred HHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHc--CCcEEEecCCHHHHHHHHHh---CCeEEECcccc
Confidence 34455677776533111 1 267888888888765 46788888787777666654 79999996654
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHH-hccceEEec--cccCCCCCHHHH
Q 008112 351 GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVR-EGADAVMLS--GETAHGKFPLKA 427 (577)
Q Consensus 351 g~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~-~G~D~imLs--~ETa~G~yP~ea 427 (577)
+. ..+++.+.+.||||++.|.|. .|..|+...++++. .|.+-++|- +=+..-.||.+.
T Consensus 133 ------~n-----~~ll~~~a~~~kPV~lk~G~~--------~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~ 193 (276)
T 1vs1_A 133 ------QN-----FPLLREVGRSGKPVLLKRGFG--------NTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFT 193 (276)
T ss_dssp ------TC-----HHHHHHHHHHTCCEEEECCTT--------CCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSB
T ss_pred ------cC-----HHHHHHHHccCCeEEEcCCCC--------CCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcch
Confidence 22 234555557899999976643 47788888888665 466444442 332332455444
Q ss_pred HH
Q 008112 428 VK 429 (577)
Q Consensus 428 V~ 429 (577)
+.
T Consensus 194 vd 195 (276)
T 1vs1_A 194 LD 195 (276)
T ss_dssp CB
T ss_pred hC
Confidence 33
No 145
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=65.90 E-value=47 Score=33.16 Aligned_cols=97 Identities=18% Similarity=0.160 Sum_probs=60.0
Q ss_pred HHHHHHHh-cCCCEEEE------cCCCCHHHHHHHHHH-HHhcCCCceEEEeecC---hhhHhhHHHHHHh-cCEEEEcC
Q 008112 280 DDIKFGVD-NKVDFYAV------SFVKDAQVVHELKNY-LKSCGADIHVIVKIES---ADSIPNLHSIITA-SDGAMVAR 347 (577)
Q Consensus 280 ~dI~~al~-~gvD~I~~------SfV~sa~dv~~lr~~-l~~~~~~i~IiaKIEt---~~gv~NldeIl~~-sDGImIaR 347 (577)
+.+++-++ .|+|+|.+ ++--|.++=.++.+. .+..+.+++||+-+=+ .++++.....-+. +|++|+-+
T Consensus 28 ~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 107 (293)
T 1f6k_A 28 QIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVT 107 (293)
T ss_dssp HHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 44567788 99999976 244455555554443 4455678999998744 6666666555554 99999875
Q ss_pred CCccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 348 GDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 348 GDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
-.+-- .+.+.+...-+.| |.+.+.|+++.
T Consensus 108 P~y~~-~~~~~l~~~f~~v---a~a~~lPiilY 136 (293)
T 1f6k_A 108 PFYYK-FSFPEIKHYYDTI---IAETGSNMIVY 136 (293)
T ss_dssp CCSSC-CCHHHHHHHHHHH---HHHHCCCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 44311 1223344444444 45557899875
No 146
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=65.80 E-value=20 Score=33.43 Aligned_cols=60 Identities=18% Similarity=0.311 Sum_probs=44.3
Q ss_pred EEcCCCEEEEEEecC--C---CCceEEecccccccc--ccCCCCEEEEe--CCeEEEEEEEEeCCeEEE
Q 008112 189 TLTSGQEFTFTIQRG--V---GSAECVSVNYDDFVN--DVEVGDMLLVD--GGMMSLLVKSKTEDSVKC 248 (577)
Q Consensus 189 ~L~~G~~v~lt~~~~--~---~~~~~i~v~~~~~~~--~v~~Gd~I~id--DG~i~l~V~~v~~~~v~~ 248 (577)
-.+.|++++|+.... . +.+....++-..|.. .+++|+.+.+. +|.+..+|++++++.|+.
T Consensus 51 Gm~~Ge~~~v~ippe~aYG~~~~~~v~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~~~~V~v 119 (171)
T 2k8i_A 51 GHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVVV 119 (171)
T ss_dssp TCCTTCEEEEEEETTTSSCCCCTTSEEEEEGGGGTTSSCCCTTCEEEEEETTEEEEEEEEEECSSEEEE
T ss_pred CCCCCCEEEEEECcHHhcCCCChhhEEEeeHHHCCcccCccCCcEEEEECCCCcEEEEEEEEcCCEEEE
Confidence 368999999998732 2 233455666666654 58999999997 677778899999887764
No 147
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=65.51 E-value=65 Score=30.82 Aligned_cols=121 Identities=15% Similarity=0.088 Sum_probs=68.9
Q ss_pred HHHHHHHhcCCCEEEEcCC-------CCHHHHHHHHHHHHhcCCCceEEEe-ec------ChhhHhhHHHHHHh-----c
Q 008112 280 DDIKFGVDNKVDFYAVSFV-------KDAQVVHELKNYLKSCGADIHVIVK-IE------SADSIPNLHSIITA-----S 340 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV-------~sa~dv~~lr~~l~~~~~~i~IiaK-IE------t~~gv~NldeIl~~-----s 340 (577)
+.++.+.+.|+|+|=+... .+.+++.++++.+.+.|-.+..++- .. ..+.++.+...++. +
T Consensus 19 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~ 98 (286)
T 3dx5_A 19 DIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMISDYLDISLSADFEKTIEKCEQLAILANWFKT 98 (286)
T ss_dssp HHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHHhCC
Confidence 4567888999999987432 2357888889988877766544421 10 02334445444443 5
Q ss_pred CEEEEcCCCccCCCC----CCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHH
Q 008112 341 DGAMVARGDLGAELP----IEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAV 405 (577)
Q Consensus 341 DGImIaRGDLg~elg----~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav 405 (577)
+.|.+-.|...-... ++.+....+++...|+++|..+.+ |.+-.....|..++.++...+
T Consensus 99 ~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l-----E~~~~~~~~~~~~~~~l~~~~ 162 (286)
T 3dx5_A 99 NKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLL-----ETHPNTLTDTLPSTLELLGEV 162 (286)
T ss_dssp CEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEE-----ECCTTSTTSSHHHHHHHHHHH
T ss_pred CEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEE-----ecCCCcCcCCHHHHHHHHHhc
Confidence 677666554332111 123344445677777777876554 333333345556665555554
No 148
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=65.49 E-value=66 Score=34.43 Aligned_cols=87 Identities=15% Similarity=0.190 Sum_probs=49.9
Q ss_pred Cce-EEEeecChhhHhhHHHHHHh-----cCEEEEcCC-----Cc---cCCCC-CCc--HHHHHHHHHHHHHH-c--CCc
Q 008112 317 DIH-VIVKIESADSIPNLHSIITA-----SDGAMVARG-----DL---GAELP-IEE--VPLLQEEIIRTCRS-M--GKA 376 (577)
Q Consensus 317 ~i~-IiaKIEt~~gv~NldeIl~~-----sDGImIaRG-----DL---g~elg-~e~--v~~~qk~Ii~~c~~-a--GKP 376 (577)
+.+ |+.||=--...+++.+|++. +|||.+.-+ |+ +.+.+ +.. +....-+++...++ . .+|
T Consensus 296 ~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iP 375 (443)
T 1tv5_A 296 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 375 (443)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCc
Confidence 566 89998432222355556553 899987643 21 01111 111 11122344555444 4 789
Q ss_pred eEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 377 VIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 377 vi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
+|....+. ...|+..++..|+|+|++.
T Consensus 376 VIg~GGI~------------s~~DA~e~l~aGAd~Vqig 402 (443)
T 1tv5_A 376 IIASGGIF------------SGLDALEKIEAGASVCQLY 402 (443)
T ss_dssp EEEESSCC------------SHHHHHHHHHTTEEEEEES
T ss_pred EEEECCCC------------CHHHHHHHHHcCCCEEEEc
Confidence 88765533 2467889999999999996
No 149
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=65.33 E-value=57 Score=33.75 Aligned_cols=123 Identities=13% Similarity=0.100 Sum_probs=67.1
Q ss_pred CCCccCHHHH--------HHHHhcCCCEEEE-------------cCCCCHHH------------HHHHHHHHHh-cCCCc
Q 008112 273 SITEKDWDDI--------KFGVDNKVDFYAV-------------SFVKDAQV------------VHELKNYLKS-CGADI 318 (577)
Q Consensus 273 ~ltekD~~dI--------~~al~~gvD~I~~-------------SfV~sa~d------------v~~lr~~l~~-~~~~i 318 (577)
.||..|++.+ +.+.+.|+|+|=+ |..+...| +.++.+.+.+ .+.+
T Consensus 150 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~- 228 (364)
T 1vyr_A 150 ALELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSAD- 228 (364)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGG-
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCC-
Confidence 6788887666 3457889999987 33333222 3333333322 3545
Q ss_pred eEEEeecCh---h-------hHhhHHHHHHh-----cCEEEEcCCCccCCCCCCcHHHHHHHHHH-HHHHcCCceEEEeh
Q 008112 319 HVIVKIESA---D-------SIPNLHSIITA-----SDGAMVARGDLGAELPIEEVPLLQEEIIR-TCRSMGKAVIVATN 382 (577)
Q Consensus 319 ~IiaKIEt~---~-------gv~NldeIl~~-----sDGImIaRGDLg~elg~e~v~~~qk~Ii~-~c~~aGKPvi~ATq 382 (577)
.|..||-.. . .++..-++++. +|.|-+..+...- .+...+ ..++ ..+..++|++....
T Consensus 229 ~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~-~~~~~~-----~~~~~v~~~~~iPvi~~Gg 302 (364)
T 1vyr_A 229 RIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAG-GKPYSE-----AFRQKVRERFHGVIIGAGA 302 (364)
T ss_dssp GEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTB-CCCCCH-----HHHHHHHHHCCSEEEEESS
T ss_pred cEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccC-CCcccH-----HHHHHHHHHCCCCEEEECC
Confidence 788887432 2 22233333332 7888887543311 111122 2222 33456889886533
Q ss_pred hhHhhhcCCCCChHhHHHHHHHHHhc-cceEEec
Q 008112 383 MLESMIVHPTPTRAEVSDIAIAVREG-ADAVMLS 415 (577)
Q Consensus 383 ~LeSM~~~~~PtrAEv~Dv~nav~~G-~D~imLs 415 (577)
. |+ .++..++..| +|+|++.
T Consensus 303 ---------i-t~---~~a~~~l~~g~aD~V~~g 323 (364)
T 1vyr_A 303 ---------Y-TA---EKAEDLIGKGLIDAVAFG 323 (364)
T ss_dssp ---------C-CH---HHHHHHHHTTSCSEEEES
T ss_pred ---------c-CH---HHHHHHHHCCCccEEEEC
Confidence 2 33 3456788888 9999985
No 150
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=65.20 E-value=43 Score=33.71 Aligned_cols=97 Identities=18% Similarity=0.139 Sum_probs=60.4
Q ss_pred HHHHHHHhcCCCEEEE------cCCCCHHHHHHHHHH-HHhcCCCceEEEeecC---hhhHhhHHHHHHh-cCEEEEcCC
Q 008112 280 DDIKFGVDNKVDFYAV------SFVKDAQVVHELKNY-LKSCGADIHVIVKIES---ADSIPNLHSIITA-SDGAMVARG 348 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~------SfV~sa~dv~~lr~~-l~~~~~~i~IiaKIEt---~~gv~NldeIl~~-sDGImIaRG 348 (577)
+.+++-++.|+|+|.+ ++.-|.++=.++.+. .+..+.+++||+-+=+ .++++.....-+. +|++|+-+-
T Consensus 36 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 115 (303)
T 2wkj_A 36 RLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTP 115 (303)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCC
Confidence 3456778899999976 334455555555444 4455678999998743 6666666655555 999998654
Q ss_pred CccCCCCCCcHHHHHHHHHHHHHHcC-CceEEE
Q 008112 349 DLGAELPIEEVPLLQEEIIRTCRSMG-KAVIVA 380 (577)
Q Consensus 349 DLg~elg~e~v~~~qk~Ii~~c~~aG-KPvi~A 380 (577)
.+.- .+.+.+...-+.|. .+.. .|+++.
T Consensus 116 ~y~~-~s~~~l~~~f~~va---~a~~~lPiilY 144 (303)
T 2wkj_A 116 FYYP-FSFEEHCDHYRAII---DSADGLPMVVY 144 (303)
T ss_dssp CSSC-CCHHHHHHHHHHHH---HHHTTCCEEEE
T ss_pred CCCC-CCHHHHHHHHHHHH---HhCCCCCEEEE
Confidence 4421 13334444445554 4445 999875
No 151
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=65.08 E-value=26 Score=35.30 Aligned_cols=96 Identities=11% Similarity=0.112 Sum_probs=57.9
Q ss_pred HHHHHHhcCCCEEEEc------CCCCHHHHHHHHH-HHHhcCC-CceEEEeec---ChhhHhhHHHHHHh-cCEEEEcCC
Q 008112 281 DIKFGVDNKVDFYAVS------FVKDAQVVHELKN-YLKSCGA-DIHVIVKIE---SADSIPNLHSIITA-SDGAMVARG 348 (577)
Q Consensus 281 dI~~al~~gvD~I~~S------fV~sa~dv~~lr~-~l~~~~~-~i~IiaKIE---t~~gv~NldeIl~~-sDGImIaRG 348 (577)
.+++-++.|+|+|.+. +--|.++=.++.+ ..+..+. ++++|+-+= |.++++.....-+. +|++|+-+-
T Consensus 33 lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 112 (301)
T 3m5v_A 33 LIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAP 112 (301)
T ss_dssp HHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 3567788999999763 2234444444433 3445566 799999874 45555555555544 899998755
Q ss_pred CccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 349 DLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
.+.- ...+.+ .+..-..|.+.+.|+++.
T Consensus 113 ~y~~-~s~~~l---~~~f~~va~a~~lPiilY 140 (301)
T 3m5v_A 113 YYNK-PTQQGL---YEHYKAIAQSVDIPVLLY 140 (301)
T ss_dssp CSSC-CCHHHH---HHHHHHHHHHCSSCEEEE
T ss_pred CCCC-CCHHHH---HHHHHHHHHhCCCCEEEE
Confidence 4421 122233 334444455569999975
No 152
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=64.55 E-value=63 Score=29.83 Aligned_cols=126 Identities=10% Similarity=0.067 Sum_probs=70.8
Q ss_pred CHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCCCccCCCCC
Q 008112 278 DWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPI 356 (577)
Q Consensus 278 D~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGDLg~elg~ 356 (577)
+.+.++.+.+.|+|+| ++-.-..+-+ +++.+. ++.+++.+-|.+- +..-++. +|.+-+-++++. +
T Consensus 72 ~~~~~~~a~~~Gad~i-v~~~~~~~~~----~~~~~~--g~~vi~g~~t~~e---~~~a~~~Gad~vk~~~~~~~---g- 137 (205)
T 1wa3_A 72 SVEQCRKAVESGAEFI-VSPHLDEEIS----QFCKEK--GVFYMPGVMTPTE---LVKAMKLGHTILKLFPGEVV---G- 137 (205)
T ss_dssp SHHHHHHHHHHTCSEE-ECSSCCHHHH----HHHHHH--TCEEECEECSHHH---HHHHHHTTCCEEEETTHHHH---H-
T ss_pred CHHHHHHHHHcCCCEE-EcCCCCHHHH----HHHHHc--CCcEECCcCCHHH---HHHHHHcCCCEEEEcCcccc---C-
Confidence 4556788899999999 5544454333 333332 5677776555432 2222222 788776432210 1
Q ss_pred CcHHHHHHHHHHHHHHc-CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCC---HHHHHHHHH
Q 008112 357 EEVPLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKF---PLKAVKVMH 432 (577)
Q Consensus 357 e~v~~~qk~Ii~~c~~a-GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~y---P~eaV~~m~ 432 (577)
+ +.+-+.+... +.|++.+..+ +. .++..+...|+|++.+.+-... .. |.+.++.+.
T Consensus 138 --~----~~~~~l~~~~~~~pvia~GGI----------~~---~~~~~~~~~Ga~~v~vGs~i~~-~d~~~~~~~~~~~~ 197 (205)
T 1wa3_A 138 --P----QFVKAMKGPFPNVKFVPTGGV----------NL---DNVCEWFKAGVLAVGVGSALVK-GTPDEVREKAKAFV 197 (205)
T ss_dssp --H----HHHHHHHTTCTTCEEEEBSSC----------CT---TTHHHHHHHTCSCEEECHHHHC-SCHHHHHHHHHHHH
T ss_pred --H----HHHHHHHHhCCCCcEEEcCCC----------CH---HHHHHHHHCCCCEEEECccccC-CCHHHHHHHHHHHH
Confidence 1 1121222233 6787764332 21 2577888999999998644333 45 777777776
Q ss_pred HHHHH
Q 008112 433 TVSLR 437 (577)
Q Consensus 433 ~I~~~ 437 (577)
.++++
T Consensus 198 ~~~~~ 202 (205)
T 1wa3_A 198 EKIRG 202 (205)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66543
No 153
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=64.42 E-value=36 Score=33.36 Aligned_cols=126 Identities=10% Similarity=0.068 Sum_probs=71.4
Q ss_pred HHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh----cCEEEEcCC---CccCCCCC
Q 008112 284 FGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA----SDGAMVARG---DLGAELPI 356 (577)
Q Consensus 284 ~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~----sDGImIaRG---DLg~elg~ 356 (577)
.+.+.|+|+|-+.- +.-.+.++|+++ +.+..|-+-+ .+.+|+..+ +|.|.+++- +.--..+.
T Consensus 107 lA~~~gAdGVHLg~--~dl~~~~~r~~~---~~~~~iG~S~------ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~ 175 (243)
T 3o63_A 107 IARAAGADVLHLGQ--RDLPVNVARQIL---APDTLIGRST------HDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAA 175 (243)
T ss_dssp HHHHHTCSEEEECT--TSSCHHHHHHHS---CTTCEEEEEE------CSHHHHHHHHHSSCSEEEECCSSCCCC-----C
T ss_pred HHHHhCCCEEEecC--CcCCHHHHHHhh---CCCCEEEEeC------CCHHHHHHHhhCCCCEEEEcCccCCCCCCCcch
Confidence 36778999998873 323356666654 3343444433 444454432 899999862 21111111
Q ss_pred CcHHHHHHHHHHHHHH--cCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHH
Q 008112 357 EEVPLLQEEIIRTCRS--MGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTV 434 (577)
Q Consensus 357 e~v~~~qk~Ii~~c~~--aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I 434 (577)
..+.. +-+.+.. ..+|++..-.+ +. .++..+...|+|++.+.+.-..-.-|.++++.+...
T Consensus 176 ~gl~~----l~~~~~~~~~~iPvvAiGGI----------~~---~ni~~~~~aGa~gvav~sai~~a~dp~~a~~~l~~~ 238 (243)
T 3o63_A 176 PGLGL----VRVAAELGGDDKPWFAIGGI----------NA---QRLPAVLDAGARRIVVVRAITSADDPRAAAEQLRSA 238 (243)
T ss_dssp CCHHH----HHHHHTC---CCCEEEESSC----------CT---TTHHHHHHTTCCCEEESHHHHTCSSHHHHHHHHHHH
T ss_pred hhHHH----HHHHHHhccCCCCEEEecCC----------CH---HHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHH
Confidence 11211 1112222 37888764332 22 246677889999999865555557799999998877
Q ss_pred HHH
Q 008112 435 SLR 437 (577)
Q Consensus 435 ~~~ 437 (577)
..+
T Consensus 239 ~~~ 241 (243)
T 3o63_A 239 LTA 241 (243)
T ss_dssp HHT
T ss_pred HHh
Confidence 654
No 154
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=64.20 E-value=16 Score=36.89 Aligned_cols=64 Identities=9% Similarity=0.067 Sum_probs=50.7
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhH--hhHHHHHHh-cCEEEEcC
Q 008112 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSI--PNLHSIITA-SDGAMVAR 347 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv--~NldeIl~~-sDGImIaR 347 (577)
.+.++.+++.|+|+|.+-.. ++++++++++.+...+.++ +||=--|| +|+.++.+. +|+|.+|.
T Consensus 204 ~eea~eal~aGaD~I~LDn~-~~~~~~~~v~~l~~~~~~v----~ieaSGGIt~~~i~~~a~tGVD~isvG~ 270 (284)
T 1qpo_A 204 LEQLDAVLPEKPELILLDNF-AVWQTQTAVQRRDSRAPTV----MLESSGGLSLQTAATYAETGVDYLAVGA 270 (284)
T ss_dssp HHHHHHHGGGCCSEEEEETC-CHHHHHHHHHHHHHHCTTC----EEEEESSCCTTTHHHHHHTTCSEEECGG
T ss_pred HHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCe----EEEEECCCCHHHHHHHHhcCCCEEEECH
Confidence 67888899999999999884 8899999999887654454 44444444 699999988 99999985
No 155
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=64.12 E-value=30 Score=34.95 Aligned_cols=98 Identities=8% Similarity=0.000 Sum_probs=59.4
Q ss_pred HHHHHHhcCCCEEEEc------CCCCHHHHHHHHHH-HHhcCCCceEEEee---cChhhHhhHHHHHHh-cCEEEEcCCC
Q 008112 281 DIKFGVDNKVDFYAVS------FVKDAQVVHELKNY-LKSCGADIHVIVKI---ESADSIPNLHSIITA-SDGAMVARGD 349 (577)
Q Consensus 281 dI~~al~~gvD~I~~S------fV~sa~dv~~lr~~-l~~~~~~i~IiaKI---Et~~gv~NldeIl~~-sDGImIaRGD 349 (577)
.+++-++.|+|+|.+. +.-|.++=.++.+. .+..+.++.||+-+ -|.++++......+. +|++|+-+-.
T Consensus 40 lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 119 (307)
T 3s5o_A 40 NLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPC 119 (307)
T ss_dssp HHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 4567788999999753 33445555555444 44556789999976 445556555555554 9999985333
Q ss_pred c-cCCCCCCcHHHHHHHHHHHHHHcCCceEEEe
Q 008112 350 L-GAELPIEEVPLLQEEIIRTCRSMGKAVIVAT 381 (577)
Q Consensus 350 L-g~elg~e~v~~~qk~Ii~~c~~aGKPvi~AT 381 (577)
. ......+.+...-+.| |.+.+.|+++.-
T Consensus 120 y~~~~~s~~~l~~~f~~i---a~a~~lPiilYn 149 (307)
T 3s5o_A 120 YYRGRMSSAALIHHYTKV---ADLSPIPVVLYS 149 (307)
T ss_dssp TTGGGCCHHHHHHHHHHH---HHHCSSCEEEEE
T ss_pred cCCCCCCHHHHHHHHHHH---HhhcCCCEEEEe
Confidence 2 2122333444444444 556689999753
No 156
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=63.79 E-value=31 Score=32.91 Aligned_cols=133 Identities=13% Similarity=0.164 Sum_probs=67.6
Q ss_pred CHHHHHHHHhcCCCEEEEcC--CCCHHHHHHHHHHHHhcCCCceEEEe-----ecCh-------hhHhhHHHHHHh-cCE
Q 008112 278 DWDDIKFGVDNKVDFYAVSF--VKDAQVVHELKNYLKSCGADIHVIVK-----IESA-------DSIPNLHSIITA-SDG 342 (577)
Q Consensus 278 D~~dI~~al~~gvD~I~~Sf--V~sa~dv~~lr~~l~~~~~~i~IiaK-----IEt~-------~gv~NldeIl~~-sDG 342 (577)
+.++++.+++.|+|.|.+.. ..+++.+.++.+ ..|.++.+-.. +++. ..++.+....+. +|.
T Consensus 86 ~~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~---~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~~~ 162 (244)
T 1vzw_A 86 DDDTLAAALATGCTRVNLGTAALETPEWVAKVIA---EHGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCAR 162 (244)
T ss_dssp SHHHHHHHHHTTCSEEEECHHHHHCHHHHHHHHH---HHGGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHcCCCEEEECchHhhCHHHHHHHHH---HcCCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCCCE
Confidence 46778888999999988753 233444444444 33433322222 3322 234444555555 787
Q ss_pred EEEcCC--CccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHh---ccceEEeccc
Q 008112 343 AMVARG--DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVRE---GADAVMLSGE 417 (577)
Q Consensus 343 ImIaRG--DLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~---G~D~imLs~E 417 (577)
|++--. |.. ..++ .+. .-+++ +...++|++....+ -+. .|+..+... |+|++++..-
T Consensus 163 i~~~~~~~~~~-~~g~-~~~-~~~~i---~~~~~ipvia~GGI---------~~~---~d~~~~~~~~~~Gadgv~vG~a 224 (244)
T 1vzw_A 163 YVVTDIAKDGT-LQGP-NLE-LLKNV---CAATDRPVVASGGV---------SSL---DDLRAIAGLVPAGVEGAIVGKA 224 (244)
T ss_dssp EEEEEC--------CC-CHH-HHHHH---HHTCSSCEEEESCC---------CSH---HHHHHHHTTGGGTEEEEEECHH
T ss_pred EEEeccCcccc-cCCC-CHH-HHHHH---HHhcCCCEEEECCC---------CCH---HHHHHHHhhccCCCceeeeeHH
Confidence 776421 111 1122 222 22222 24458999875442 233 456666666 9999998633
Q ss_pred cCCCCC-HHHHHHHH
Q 008112 418 TAHGKF-PLKAVKVM 431 (577)
Q Consensus 418 Ta~G~y-P~eaV~~m 431 (577)
--.+++ +.++++.+
T Consensus 225 l~~~~~~~~~~~~~~ 239 (244)
T 1vzw_A 225 LYAKAFTLEEALEAT 239 (244)
T ss_dssp HHTTSSCHHHHHHHH
T ss_pred HHcCCCCHHHHHHHh
Confidence 223443 33444543
No 157
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=63.52 E-value=41 Score=34.52 Aligned_cols=129 Identities=13% Similarity=0.222 Sum_probs=68.8
Q ss_pred CCCccCHHHH--------HHHHhcCCCEEEEcC-------------CCCH------------HHHHHHHHHHH-hcCCCc
Q 008112 273 SITEKDWDDI--------KFGVDNKVDFYAVSF-------------VKDA------------QVVHELKNYLK-SCGADI 318 (577)
Q Consensus 273 ~ltekD~~dI--------~~al~~gvD~I~~Sf-------------V~sa------------~dv~~lr~~l~-~~~~~i 318 (577)
.||..|++.+ +.+.+.|+|+|=+-. .+.. .-+.++.+.+. ..|.+.
T Consensus 141 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~ 220 (349)
T 3hgj_A 141 PLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPREL 220 (349)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 6788888776 456789999986633 2221 11233333332 347778
Q ss_pred eEEEeecChh------hHhhHHHHHH----h-cCEEEEcCCCccCC--CCCCcHHHHHHHHHHHHH-HcCCceEEEehhh
Q 008112 319 HVIVKIESAD------SIPNLHSIIT----A-SDGAMVARGDLGAE--LPIEEVPLLQEEIIRTCR-SMGKAVIVATNML 384 (577)
Q Consensus 319 ~IiaKIEt~~------gv~NldeIl~----~-sDGImIaRGDLg~e--lg~e~v~~~qk~Ii~~c~-~aGKPvi~ATq~L 384 (577)
.|..||---+ -+++.-++++ . +|.|-+.-|...-. ++... ..+-..++..+ ..++|++....+
T Consensus 221 pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~--~~~~~~~~~ir~~~~iPVi~~Ggi- 297 (349)
T 3hgj_A 221 PLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAP--GFQVPFADAVRKRVGLRTGAVGLI- 297 (349)
T ss_dssp CEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCT--TTTHHHHHHHHHHHCCEEEECSSC-
T ss_pred eEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCc--cccHHHHHHHHHHcCceEEEECCC-
Confidence 8888885321 1223223332 2 78888875443222 11111 11222233323 348898864322
Q ss_pred HhhhcCCCCChHhHHHHHHHHHhc-cceEEec
Q 008112 385 ESMIVHPTPTRAEVSDIAIAVREG-ADAVMLS 415 (577)
Q Consensus 385 eSM~~~~~PtrAEv~Dv~nav~~G-~D~imLs 415 (577)
-|. .++..++..| +|+|++.
T Consensus 298 --------~t~---e~a~~~l~~G~aD~V~iG 318 (349)
T 3hgj_A 298 --------TTP---EQAETLLQAGSADLVLLG 318 (349)
T ss_dssp --------CCH---HHHHHHHHTTSCSEEEES
T ss_pred --------CCH---HHHHHHHHCCCceEEEec
Confidence 233 3355778888 9999985
No 158
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=63.45 E-value=30 Score=34.10 Aligned_cols=145 Identities=17% Similarity=0.147 Sum_probs=84.0
Q ss_pred CCCCccCHHHH-HHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHH----h----cCE
Q 008112 272 PSITEKDWDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT----A----SDG 342 (577)
Q Consensus 272 p~ltekD~~dI-~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~----~----sDG 342 (577)
|.-|+.|.+.+ ..+.+.|++.|+++ +..+..+++.++ +.+++|.+=|=-|.|-...+.-+. + +|.
T Consensus 38 p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~~a~~~L~--~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 111 (239)
T 3ngj_A 38 ADATEEQIRKLCSEAAEYKFASVCVN----PTWVPLCAELLK--GTGVKVCTVIGFPLGATPSEVKAYETKVAVEQGAEE 111 (239)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHHT--TSSCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhC--CCCCeEEEEeccCCCCCchHHHHHHHHHHHHcCCCE
Confidence 45577776553 67888999999885 567888888884 456777777766555543332221 1 443
Q ss_pred EE--EcCCCccCCCCCCcHHHHHHH---HHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhccceEEecc
Q 008112 343 AM--VARGDLGAELPIEEVPLLQEE---IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSG 416 (577)
Q Consensus 343 Im--IaRGDLg~elg~e~v~~~qk~---Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~D~imLs~ 416 (577)
|= |..|.|- -.+...+.++ +.++|...-.+||+-|-.| |..|+..... +...|+|.|=-|.
T Consensus 112 IDmViNig~lk----~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L---------t~eei~~a~~ia~~aGADfVKTST 178 (239)
T 3ngj_A 112 VDMVINIGMVK----AKKYDDVEKDVKAVVDASGKALTKVIIECCYL---------TNEEKVEVCKRCVAAGAEYVKTST 178 (239)
T ss_dssp EEEECCHHHHH----TTCHHHHHHHHHHHHHHHTTSEEEEECCGGGS---------CHHHHHHHHHHHHHHTCSEEECCC
T ss_pred EEEEeehHHhc----cccHHHHHHHHHHHHHHhcCCceEEEEecCCC---------CHHHHHHHHHHHHHHCcCEEECCC
Confidence 32 1222110 0234445544 4445532224556555433 6777766655 5678999998761
Q ss_pred ccCCCCCHHHHHHHHHHHH
Q 008112 417 ETAHGKFPLKAVKVMHTVS 435 (577)
Q Consensus 417 ETa~G~yP~eaV~~m~~I~ 435 (577)
==..|.--++.|+.|++.+
T Consensus 179 Gf~~ggAt~~dv~lmr~~v 197 (239)
T 3ngj_A 179 GFGTHGATPEDVKLMKDTV 197 (239)
T ss_dssp SSSSCCCCHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHhh
Confidence 1112223458999999875
No 159
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=63.43 E-value=1.2e+02 Score=30.37 Aligned_cols=131 Identities=20% Similarity=0.244 Sum_probs=78.0
Q ss_pred cCCCEEEEcCC-------CCHHHHHHHHHHHHhcCCCceEEE-eecChhhHhhHHHHHHh-cCEEEEcCCCccCCCCCCc
Q 008112 288 NKVDFYAVSFV-------KDAQVVHELKNYLKSCGADIHVIV-KIESADSIPNLHSIITA-SDGAMVARGDLGAELPIEE 358 (577)
Q Consensus 288 ~gvD~I~~SfV-------~sa~dv~~lr~~l~~~~~~i~Iia-KIEt~~gv~NldeIl~~-sDGImIaRGDLg~elg~e~ 358 (577)
.|-+||=+--+ .+.....+.-+.+.+ ..+.++. -..++.--. .+.+. +|.+|.-....|...|+..
T Consensus 101 ~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~--~Gf~Vlpy~~dd~~~ak---rl~~~G~~aVmPlg~pIGsG~Gi~~ 175 (265)
T 1wv2_A 101 DGHNLVKLEVLADQKTLFPNVVETLKAAEQLVK--DGFDVMVYTSDDPIIAR---QLAEIGCIAVMPLAGLIGSGLGICN 175 (265)
T ss_dssp TSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHT--TTCEEEEEECSCHHHHH---HHHHSCCSEEEECSSSTTCCCCCSC
T ss_pred CCCCeEEEEeecCccccCcCHHHHHHHHHHHHH--CCCEEEEEeCCCHHHHH---HHHHhCCCEEEeCCccCCCCCCcCC
Confidence 47778877666 233333333233322 3455553 444443322 22233 7888873334455556655
Q ss_pred HHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHH
Q 008112 359 VPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRT 438 (577)
Q Consensus 359 v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~a 438 (577)
+...+.|.+ ..+.|||++..+ -|. +|++.++..|+|+|++..=-+.++.|.+-.+.+..-++.-
T Consensus 176 -~~lI~~I~e---~~~vPVI~eGGI---------~TP---sDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~af~~Av~aG 239 (265)
T 1wv2_A 176 -PYNLRIILE---EAKVPVLVDAGV---------GTA---SDAAIAMELGCEAVLMNTAIAHAKDPVMMAEAMKHAIVAG 239 (265)
T ss_dssp -HHHHHHHHH---HCSSCBEEESCC---------CSH---HHHHHHHHHTCSEEEESHHHHTSSSHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHh---cCCCCEEEeCCC---------CCH---HHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHHHH
Confidence 344455544 468999986543 344 5688999999999999865566889988877777655443
Q ss_pred h
Q 008112 439 E 439 (577)
Q Consensus 439 E 439 (577)
-
T Consensus 240 r 240 (265)
T 1wv2_A 240 R 240 (265)
T ss_dssp H
T ss_pred H
Confidence 3
No 160
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=63.34 E-value=38 Score=31.82 Aligned_cols=127 Identities=17% Similarity=0.158 Sum_probs=69.4
Q ss_pred HHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhh----HhhHHHHHHh-----cCEEEEcCCCc
Q 008112 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADS----IPNLHSIITA-----SDGAMVARGDL 350 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~g----v~NldeIl~~-----sDGImIaRGDL 350 (577)
..++...+.|+|+|.+..--..+-++.+++ .+ .+.+.+..-+... .+.++.++.. .||+.+.+.
T Consensus 69 ~~v~~~~~~Gad~vtvh~~~g~~~i~~~~~----~~-gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~-- 141 (208)
T 2czd_A 69 LIARKVFGAGADYVIVHTFVGRDSVMAVKE----LG-EIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPGT-- 141 (208)
T ss_dssp HHHHHHHHTTCSEEEEESTTCHHHHHHHHT----TS-EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCS--
T ss_pred HHHHHHHhcCCCEEEEeccCCHHHHHHHHH----hC-CcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCC--
Confidence 456677789999998877666555444433 33 4444444422211 3344555442 677765421
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcC-CceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHH
Q 008112 351 GAELPIEEVPLLQEEIIRTCRSMG-KAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVK 429 (577)
Q Consensus 351 g~elg~e~v~~~qk~Ii~~c~~aG-KPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~ 429 (577)
.++++.. +-+.+ + .++++ +.-. .+ +-.++..++..|+|.+....--....-|.++++
T Consensus 142 ----~~~~i~~----lr~~~---~~~~~iv-~gGI-------~~---~g~~~~~~~~aGad~vvvGr~I~~a~dp~~~~~ 199 (208)
T 2czd_A 142 ----RPERIGY----IRDRL---KEGIKIL-APGI-------GA---QGGKAKDAVKAGADYIIVGRAIYNAPNPREAAK 199 (208)
T ss_dssp ----STHHHHH----HHHHS---CTTCEEE-ECCC-------CS---STTHHHHHHHHTCSEEEECHHHHTSSSHHHHHH
T ss_pred ----ChHHHHH----HHHhC---CCCeEEE-ECCC-------CC---CCCCHHHHHHcCCCEEEEChHHhcCCCHHHHHH
Confidence 1223322 22222 3 35554 3211 12 122467788889999997543333445989888
Q ss_pred HHHHHH
Q 008112 430 VMHTVS 435 (577)
Q Consensus 430 ~m~~I~ 435 (577)
.+++..
T Consensus 200 ~l~~~i 205 (208)
T 2czd_A 200 AIYDEI 205 (208)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877643
No 161
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=63.10 E-value=44 Score=34.63 Aligned_cols=120 Identities=18% Similarity=0.209 Sum_probs=67.1
Q ss_pred CCCccCHHHH--------HHHHhcCCCEEEEcC-------------CCCHHH----------------HHHHHHHHHhcC
Q 008112 273 SITEKDWDDI--------KFGVDNKVDFYAVSF-------------VKDAQV----------------VHELKNYLKSCG 315 (577)
Q Consensus 273 ~ltekD~~dI--------~~al~~gvD~I~~Sf-------------V~sa~d----------------v~~lr~~l~~~~ 315 (577)
.||..|++.+ +.+.+.|+|+|=+-. .+...| ++.+|+.+ +
T Consensus 150 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~v---g 226 (365)
T 2gou_A 150 AMTKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAI---G 226 (365)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHH---C
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHc---C
Confidence 6777777665 345789999998733 222211 44444443 4
Q ss_pred CCceEEEeecChh---------hHhhHHHHHHh-----cCEEEEcCCCccCCCCCCcHHHHHHHHHH-HHHHcCCceEEE
Q 008112 316 ADIHVIVKIESAD---------SIPNLHSIITA-----SDGAMVARGDLGAELPIEEVPLLQEEIIR-TCRSMGKAVIVA 380 (577)
Q Consensus 316 ~~i~IiaKIEt~~---------gv~NldeIl~~-----sDGImIaRGDLg~elg~e~v~~~qk~Ii~-~c~~aGKPvi~A 380 (577)
.+ .|..||-..+ .++...++++. +|+|-+..+.+.-. + ..+ ...++ ..+..++|+|..
T Consensus 227 ~~-pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~-~--~~~---~~~~~~i~~~~~iPvi~~ 299 (365)
T 2gou_A 227 AE-RVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDA-P--DTP---VSFKRALREAYQGVLIYA 299 (365)
T ss_dssp GG-GEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBC-C--CCC---HHHHHHHHHHCCSEEEEE
T ss_pred CC-cEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCC-C--Ccc---HHHHHHHHHHCCCcEEEe
Confidence 45 7888884321 23333333332 78888876543211 1 111 12232 234457898865
Q ss_pred ehhhHhhhcCCCCChHhHHHHHHHHHhc-cceEEec
Q 008112 381 TNMLESMIVHPTPTRAEVSDIAIAVREG-ADAVMLS 415 (577)
Q Consensus 381 Tq~LeSM~~~~~PtrAEv~Dv~nav~~G-~D~imLs 415 (577)
.. . |. .++..++..| +|+|++.
T Consensus 300 Gg---------i-~~---~~a~~~l~~g~aD~V~ig 322 (365)
T 2gou_A 300 GR---------Y-NA---EKAEQAINDGLADMIGFG 322 (365)
T ss_dssp SS---------C-CH---HHHHHHHHTTSCSEEECC
T ss_pred CC---------C-CH---HHHHHHHHCCCcceehhc
Confidence 43 2 33 3466788888 9999985
No 162
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=62.88 E-value=20 Score=32.26 Aligned_cols=63 Identities=21% Similarity=0.211 Sum_probs=36.9
Q ss_pred EEEcCCCEEEEEEecCCCCceEEecccc-------ccccccCCCCEEEEeCC----eEEEEEEEE---eCCeEEEEEeeC
Q 008112 188 ITLTSGQEFTFTIQRGVGSAECVSVNYD-------DFVNDVEVGDMLLVDGG----MMSLLVKSK---TEDSVKCEVVDG 253 (577)
Q Consensus 188 i~L~~G~~v~lt~~~~~~~~~~i~v~~~-------~~~~~v~~Gd~I~idDG----~i~l~V~~v---~~~~v~~~v~~g 253 (577)
+..+.|..+++|.+. .|++... -+.++|++||.|++.|| ...-+|.++ ....++|=....
T Consensus 58 I~t~~g~~L~lTp~H------~i~v~~~~~~~~~~v~A~~l~~GD~v~~~~~~~~~~~~~~V~~v~~~~~~G~yaPlT~~ 131 (145)
T 1at0_A 58 LHTDGGAVLTVTPAH------LVSVWQPESQKLTFVFADRIEEKNQVLVRDVETGELRPQRVVKVGSVRSKGVVAPLTRE 131 (145)
T ss_dssp EEETTSCEEEECTTC------EEEEEETTTTEEEEEEGGGCCTTCEEEEECTTTCCEEEEEEEEEEEEEEEEEEEEEESS
T ss_pred EEECCCCEEEEeCCC------EEEEecCCCCcEEEEEHHHCcCCCEEEEecCCCCCEEEEEEEEEEEEEEeeeEccccCc
Confidence 445567777777542 2333221 26678999999999887 334445554 344566644444
Q ss_pred cEe
Q 008112 254 GEL 256 (577)
Q Consensus 254 G~l 256 (577)
|.|
T Consensus 132 Gti 134 (145)
T 1at0_A 132 GTI 134 (145)
T ss_dssp SEE
T ss_pred EEE
Confidence 433
No 163
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=62.86 E-value=42 Score=34.32 Aligned_cols=97 Identities=10% Similarity=0.007 Sum_probs=60.0
Q ss_pred HHHHHHHhcCCCEEEEc------CCCCHHHHHHHHH-HHHhcCCCceEEEeecC---hhhHhhHHHHHHh-cCEEEEcCC
Q 008112 280 DDIKFGVDNKVDFYAVS------FVKDAQVVHELKN-YLKSCGADIHVIVKIES---ADSIPNLHSIITA-SDGAMVARG 348 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~S------fV~sa~dv~~lr~-~l~~~~~~i~IiaKIEt---~~gv~NldeIl~~-sDGImIaRG 348 (577)
+.+++-++.|+|+|++. +.-|.++=.++.+ ..+..+.+++||+-+=+ .++++......+. +|++|+.+-
T Consensus 59 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 138 (332)
T 2r8w_A 59 ALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPV 138 (332)
T ss_dssp HHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 34567788999999762 3345545444444 34455668999998743 6666666655554 999999755
Q ss_pred CccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 349 DLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
.+.- .+.+.+...-+.| |.+.+.|+++.
T Consensus 139 ~Y~~-~s~~~l~~~f~~V---A~a~~lPiilY 166 (332)
T 2r8w_A 139 SYTP-LTQEEAYHHFAAV---AGATALPLAIY 166 (332)
T ss_dssp CSSC-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 4421 2223344444444 55668999875
No 164
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=62.86 E-value=23 Score=36.51 Aligned_cols=97 Identities=13% Similarity=0.082 Sum_probs=59.8
Q ss_pred HHHHHHHhcCCCEEEEc------CCCCHHHHHHHHHH-HHhcCCCceEEEeec---ChhhHhhHHHHHHh-cCEEEEcCC
Q 008112 280 DDIKFGVDNKVDFYAVS------FVKDAQVVHELKNY-LKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARG 348 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~S------fV~sa~dv~~lr~~-l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDGImIaRG 348 (577)
+.+++-++.|+|+|++. +.-|.++=.++.+. .+..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 56 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 135 (343)
T 2v9d_A 56 ALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINP 135 (343)
T ss_dssp HHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 34467788999999762 44455555454443 444566889999875 46666666655555 999998754
Q ss_pred CccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 349 DLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
.+.- .+.+.+...-+. .|.+.+.|+++.
T Consensus 136 ~Y~~-~s~~~l~~~f~~---VA~a~~lPiilY 163 (343)
T 2v9d_A 136 YYWK-VSEANLIRYFEQ---VADSVTLPVMLY 163 (343)
T ss_dssp SSSC-CCHHHHHHHHHH---HHHTCSSCEEEE
T ss_pred CCCC-CCHHHHHHHHHH---HHHhcCCCEEEE
Confidence 4421 122234333344 455668999875
No 165
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=62.82 E-value=36 Score=33.97 Aligned_cols=97 Identities=11% Similarity=0.082 Sum_probs=59.4
Q ss_pred HHHHHHHhcCCCEEEEc------CCCCHHHHHHHHHH-HHhcCCCceEEEeecC---hhhHhhHHHHHHh-cCEEEEcCC
Q 008112 280 DDIKFGVDNKVDFYAVS------FVKDAQVVHELKNY-LKSCGADIHVIVKIES---ADSIPNLHSIITA-SDGAMVARG 348 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~S------fV~sa~dv~~lr~~-l~~~~~~i~IiaKIEt---~~gv~NldeIl~~-sDGImIaRG 348 (577)
+.+++-++.|+|++.+. +.-|.++=.++.+. .+..+.+++||+-+=+ .++++....--+. +|++|+-+-
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 104 (289)
T 2yxg_A 25 ENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITP 104 (289)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 34567788999998762 33455444444443 4445667999998743 6666666555554 999998754
Q ss_pred CccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 349 DLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
.+.- .+.+.+...-+. .|.+.+.|+++.
T Consensus 105 ~y~~-~s~~~l~~~f~~---ia~a~~lPiilY 132 (289)
T 2yxg_A 105 YYNK-PTQEGLRKHFGK---VAESINLPIVLY 132 (289)
T ss_dssp CSSC-CCHHHHHHHHHH---HHHHCSSCEEEE
T ss_pred CCCC-CCHHHHHHHHHH---HHHhcCCCEEEE
Confidence 4421 122334333344 455668999875
No 166
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=62.73 E-value=32 Score=34.93 Aligned_cols=97 Identities=15% Similarity=0.111 Sum_probs=55.2
Q ss_pred HHHHHHhcCCCEEEEc------CCCCHHHHHHHHH-HHHhcCCCceEEEeec--ChhhHhhHHHHHHh-cCEEEEcCCCc
Q 008112 281 DIKFGVDNKVDFYAVS------FVKDAQVVHELKN-YLKSCGADIHVIVKIE--SADSIPNLHSIITA-SDGAMVARGDL 350 (577)
Q Consensus 281 dI~~al~~gvD~I~~S------fV~sa~dv~~lr~-~l~~~~~~i~IiaKIE--t~~gv~NldeIl~~-sDGImIaRGDL 350 (577)
.+++-++.|+|+|++. +--|.++=.++.+ ..+..+.+++||+-+= |.++++......+. +|++|+-+-..
T Consensus 38 lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P~y 117 (316)
T 3e96_A 38 TVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGADAVMIHMPIH 117 (316)
T ss_dssp HHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCCCC
T ss_pred HHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 4567789999998753 2224444444443 3445567899999873 33333333333333 89999964333
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCceEEEe
Q 008112 351 GAELPIEEVPLLQEEIIRTCRSMGKAVIVAT 381 (577)
Q Consensus 351 g~elg~e~v~~~qk~Ii~~c~~aGKPvi~AT 381 (577)
.....+.+...-+.|.+ +.+.|+++.-
T Consensus 118 -~~~s~~~l~~~f~~va~---a~~lPiilYn 144 (316)
T 3e96_A 118 -PYVTAGGVYAYFRDIIE---ALDFPSLVYF 144 (316)
T ss_dssp -SCCCHHHHHHHHHHHHH---HHTSCEEEEE
T ss_pred -CCCCHHHHHHHHHHHHH---hCCCCEEEEe
Confidence 11233344444445544 4479999864
No 167
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=62.66 E-value=34 Score=34.12 Aligned_cols=122 Identities=11% Similarity=0.069 Sum_probs=64.8
Q ss_pred HHHHHhcCCC---EEEEcCC-----------CCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh------cC
Q 008112 282 IKFGVDNKVD---FYAVSFV-----------KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA------SD 341 (577)
Q Consensus 282 I~~al~~gvD---~I~~SfV-----------~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~------sD 341 (577)
.+.+.+.|+| +|-+.|- .+.+.+.++.+.+.+. .+.+++.|+=.--..+++.++++. +|
T Consensus 112 a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~-~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d 190 (314)
T 2e6f_A 112 VRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLA-YGLPFGVKMPPYFDIAHFDTAAAVLNEFPLVK 190 (314)
T ss_dssp HHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHH-HCSCEEEEECCCCCHHHHHHHHHHHHTCTTEE
T ss_pred HHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHh-cCCCEEEEECCCCCHHHHHHHHHHHHhcCCce
Confidence 3455567889 8877653 2555554444444332 157899998432222344444432 77
Q ss_pred EEEEcCCC---ccCC-------C----------CCCcHHHHHHHHHHHHHHc-CCceEEEehhhHhhhcCCCCChHhHHH
Q 008112 342 GAMVARGD---LGAE-------L----------PIEEVPLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSD 400 (577)
Q Consensus 342 GImIaRGD---Lg~e-------l----------g~e~v~~~qk~Ii~~c~~a-GKPvi~ATq~LeSM~~~~~PtrAEv~D 400 (577)
+|.+.-.- +.++ + +....+.....+-+..+.. +.|+|....+- | ..|
T Consensus 191 ~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~---------~---~~d 258 (314)
T 2e6f_A 191 FVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGCGGVY---------S---GED 258 (314)
T ss_dssp EEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEESSCC---------S---HHH
T ss_pred EEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEECCCC---------C---HHH
Confidence 88654211 0011 0 1111233333333333444 78888654422 2 356
Q ss_pred HHHHHHhccceEEecc
Q 008112 401 IAIAVREGADAVMLSG 416 (577)
Q Consensus 401 v~nav~~G~D~imLs~ 416 (577)
+..++..|+|+|++..
T Consensus 259 a~~~l~~GAd~V~ig~ 274 (314)
T 2e6f_A 259 AFLHILAGASMVQVGT 274 (314)
T ss_dssp HHHHHHHTCSSEEECH
T ss_pred HHHHHHcCCCEEEEch
Confidence 7888889999999963
No 168
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=61.94 E-value=19 Score=33.60 Aligned_cols=106 Identities=19% Similarity=0.231 Sum_probs=62.4
Q ss_pred hcCCCEEEEc--C--CCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhh-HHHHHHh-cCEEEEcCCCccCCCCCCcHH
Q 008112 287 DNKVDFYAVS--F--VKDAQVVHELKNYLKSCGADIHVIVKIESADSIPN-LHSIITA-SDGAMVARGDLGAELPIEEVP 360 (577)
Q Consensus 287 ~~gvD~I~~S--f--V~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~N-ldeIl~~-sDGImIaRGDLg~elg~e~v~ 360 (577)
..|+|+|-+. | -...+.++++|+. ..+.++.+-.=...+.+. +++..+. +|++.+. ++. ..
T Consensus 23 ~~~~diie~G~p~~~~~g~~~i~~ir~~----~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~--~~~-------~~ 89 (211)
T 3f4w_A 23 VDDVDIIEVGTPFLIREGVNAIKAIKEK----YPHKEVLADAKIMDGGHFESQLLFDAGADYVTVL--GVT-------DV 89 (211)
T ss_dssp GGGCSEEEECHHHHHHHTTHHHHHHHHH----CTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEE--TTS-------CH
T ss_pred hcCccEEEeCcHHHHhccHHHHHHHHHh----CCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEe--CCC-------Ch
Confidence 4689997654 3 1233445555542 234556553322344555 6666666 8999984 332 12
Q ss_pred HHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 361 LLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 361 ~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
...+++++.|+++|+++++.. + ++ .|. ...+..+...|+|.+.+.
T Consensus 90 ~~~~~~~~~~~~~g~~~~v~~--~-----~~-~t~--~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 90 LTIQSCIRAAKEAGKQVVVDM--I-----CV-DDL--PARVRLLEEAGADMLAVH 134 (211)
T ss_dssp HHHHHHHHHHHHHTCEEEEEC--T-----TC-SSH--HHHHHHHHHHTCCEEEEE
T ss_pred hHHHHHHHHHHHcCCeEEEEe--c-----CC-CCH--HHHHHHHHHcCCCEEEEc
Confidence 334778899999999988631 1 11 122 233567788999998774
No 169
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=61.86 E-value=49 Score=31.07 Aligned_cols=134 Identities=17% Similarity=0.177 Sum_probs=67.5
Q ss_pred CHHHHHHHHhcCCCEEEEcC--CCCHHHHHHHHHHHHhcCCC-ceE-----------EEeecC------hhhHhhHHHHH
Q 008112 278 DWDDIKFGVDNKVDFYAVSF--VKDAQVVHELKNYLKSCGAD-IHV-----------IVKIES------ADSIPNLHSII 337 (577)
Q Consensus 278 D~~dI~~al~~gvD~I~~Sf--V~sa~dv~~lr~~l~~~~~~-i~I-----------iaKIEt------~~gv~NldeIl 337 (577)
+.++++.+++.|+|+|.+.. ..+++. +.++....+.+ +.+ ..++.. ...++-+..+.
T Consensus 88 ~~~~~~~~~~~Gad~V~i~~~~~~~~~~---~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~ 164 (253)
T 1h5y_A 88 SLEDATTLFRAGADKVSVNTAAVRNPQL---VALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVE 164 (253)
T ss_dssp SHHHHHHHHHHTCSEEEESHHHHHCTHH---HHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEChHHhhCcHH---HHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHH
Confidence 45677888889999998763 223333 33444333422 211 222221 12334455555
Q ss_pred Hh-cCEEEEcCCCc-cCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 338 TA-SDGAMVARGDL-GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 338 ~~-sDGImIaRGDL-g~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
+. +|.|.+..-+. +...++ .+ ..-+++ ++....|++.... .-+. .|+..+...|+|++++.
T Consensus 165 ~~G~d~i~~~~~~~~g~~~~~-~~-~~i~~l---~~~~~~pvia~GG---------i~~~---~~~~~~~~~Ga~~v~vg 227 (253)
T 1h5y_A 165 ELGAGEILLTSIDRDGTGLGY-DV-ELIRRV---ADSVRIPVIASGG---------AGRV---EHFYEAAAAGADAVLAA 227 (253)
T ss_dssp HHTCSEEEEEETTTTTTCSCC-CH-HHHHHH---HHHCSSCEEEESC---------CCSH---HHHHHHHHTTCSEEEES
T ss_pred hCCCCEEEEecccCCCCcCcC-CH-HHHHHH---HHhcCCCEEEeCC---------CCCH---HHHHHHHHcCCcHHHHH
Confidence 55 89888743222 111121 22 112222 2335789887543 2222 45666777899999985
Q ss_pred cccCCCCC-HHHHHHHH
Q 008112 416 GETAHGKF-PLKAVKVM 431 (577)
Q Consensus 416 ~ETa~G~y-P~eaV~~m 431 (577)
.---.+.. +.+..++|
T Consensus 228 sal~~~~~~~~~~~~~l 244 (253)
T 1h5y_A 228 SLFHFRVLSIAQVKRYL 244 (253)
T ss_dssp HHHHTTSSCHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHH
Confidence 32222332 34444444
No 170
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=61.72 E-value=32 Score=33.89 Aligned_cols=131 Identities=11% Similarity=0.105 Sum_probs=73.8
Q ss_pred CHHHHHHHHhcCCCEEEEcCC-CCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCCCccC-CC
Q 008112 278 DWDDIKFGVDNKVDFYAVSFV-KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGA-EL 354 (577)
Q Consensus 278 D~~dI~~al~~gvD~I~~SfV-~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGDLg~-el 354 (577)
|...+..+.+.|+|+|.+--. -+ ++++++.++....|- .+++-+.+.+ .++..++. .|.|-+..-||.. +.
T Consensus 117 d~~qi~~a~~~GAD~VlL~~~~l~-~~l~~l~~~a~~lGl--~~lvev~~~~---E~~~a~~~gad~IGvn~~~l~~~~~ 190 (254)
T 1vc4_A 117 DPFMLEEARAFGASAALLIVALLG-ELTGAYLEEARRLGL--EALVEVHTER---ELEIALEAGAEVLGINNRDLATLHI 190 (254)
T ss_dssp SHHHHHHHHHTTCSEEEEEHHHHG-GGHHHHHHHHHHHTC--EEEEEECSHH---HHHHHHHHTCSEEEEESBCTTTCCB
T ss_pred CHHHHHHHHHcCCCEEEECccchH-HHHHHHHHHHHHCCC--eEEEEECCHH---HHHHHHHcCCCEEEEccccCcCCCC
Confidence 334677889999999887421 12 555555554445553 3333333332 33333333 7888887766531 22
Q ss_pred CCCcHHHHHHHHHHHHHHc--CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHH
Q 008112 355 PIEEVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVM 431 (577)
Q Consensus 355 g~e~v~~~qk~Ii~~c~~a--GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m 431 (577)
.++.. +++....... ++|++.. ...-|. .|+..... |+|+++...---.+..|.++++-|
T Consensus 191 dl~~~----~~L~~~i~~~~~~~~vIAe---------gGI~s~---~dv~~l~~-Ga~gvlVGsAl~~~~d~~~~~~~l 252 (254)
T 1vc4_A 191 NLETA----PRLGRLARKRGFGGVLVAE---------SGYSRK---EELKALEG-LFDAVLIGTSLMRAPDLEAALREL 252 (254)
T ss_dssp CTTHH----HHHHHHHHHTTCCSEEEEE---------SCCCSH---HHHHTTTT-TCSEEEECHHHHTSSCHHHHHHHH
T ss_pred CHHHH----HHHHHhCccccCCCeEEEE---------cCCCCH---HHHHHHHc-CCCEEEEeHHHcCCCCHHHHHHHH
Confidence 22222 2333333333 5677643 234445 44666677 999999865555577888887765
No 171
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=61.40 E-value=13 Score=38.82 Aligned_cols=48 Identities=23% Similarity=0.392 Sum_probs=37.6
Q ss_pred EEEEecCCCCCCHHHHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHH
Q 008112 111 KIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKE 158 (577)
Q Consensus 111 KIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~ 158 (577)
.+-+.+|......+.++.++++|++++=||.+||..+.+.+.++.+|+
T Consensus 98 ~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~ 145 (366)
T 4fo4_A 98 RVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRA 145 (366)
T ss_dssp CCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred eEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 344555655578999999999999999999999988766666666654
No 172
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=61.26 E-value=57 Score=32.97 Aligned_cols=76 Identities=12% Similarity=0.098 Sum_probs=49.4
Q ss_pred HHHHHhcCCCEEEEcCC----CCHHHHHHHHHHHHhc-CCC-ceEEEeecChhhHhhHHHHHHh-cCEEEEcCCCccCCC
Q 008112 282 IKFGVDNKVDFYAVSFV----KDAQVVHELKNYLKSC-GAD-IHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAEL 354 (577)
Q Consensus 282 I~~al~~gvD~I~~SfV----~sa~dv~~lr~~l~~~-~~~-i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGDLg~el 354 (577)
.+.+.+.|+|++-+... .+.+++.++.+..... +.- +.++.-+-..+-++++.+.+.. ++|+.+||.=+...+
T Consensus 183 a~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~~~ 262 (304)
T 1to3_A 183 AKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHINMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAGRAVWSSVI 262 (304)
T ss_dssp HHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEESHHHHGGGT
T ss_pred HHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEEecCCCHHHHHHHHHHHHHcCCeEEEEehHHhCccc
Confidence 56677899999999884 4667777766654332 222 2222234333456778888876 999999998776544
Q ss_pred CCC
Q 008112 355 PIE 357 (577)
Q Consensus 355 g~e 357 (577)
+.+
T Consensus 263 ~~~ 265 (304)
T 1to3_A 263 GLP 265 (304)
T ss_dssp TCS
T ss_pred cCC
Confidence 333
No 173
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=61.22 E-value=39 Score=32.09 Aligned_cols=118 Identities=12% Similarity=0.128 Sum_probs=63.2
Q ss_pred CHHHHHHHHhcCCCEEEEcC--CCCHHHHHHHHHHHHhcCCCce--EEEe-------ecCh-------hhHhhHHHHHHh
Q 008112 278 DWDDIKFGVDNKVDFYAVSF--VKDAQVVHELKNYLKSCGADIH--VIVK-------IESA-------DSIPNLHSIITA 339 (577)
Q Consensus 278 D~~dI~~al~~gvD~I~~Sf--V~sa~dv~~lr~~l~~~~~~i~--IiaK-------IEt~-------~gv~NldeIl~~ 339 (577)
+.++++.+++.|+|.|.+.. ..+++.+.++.+.+ +..+. +=++ +++. ..++.+....+.
T Consensus 85 ~~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~---g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~ 161 (244)
T 2y88_A 85 DDESLAAALATGCARVNVGTAALENPQWCARVIGEH---GDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSE 161 (244)
T ss_dssp SHHHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHH---GGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHT
T ss_pred CHHHHHHHHHcCCCEEEECchHhhChHHHHHHHHHc---CCCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhC
Confidence 45678888999999998763 24444455554443 32221 1112 2222 224455555555
Q ss_pred -cCEEEEcCCCccCC-CCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHh---ccceEEe
Q 008112 340 -SDGAMVARGDLGAE-LPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVRE---GADAVML 414 (577)
Q Consensus 340 -sDGImIaRGDLg~e-lg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~---G~D~imL 414 (577)
+|.|++-..+..-. -++ .+..+ +++ ++..+.|++.... .-+. .|+..+... |+|++|+
T Consensus 162 G~~~i~~~~~~~~~~~~g~-~~~~~-~~l---~~~~~ipvia~GG---------I~~~---~d~~~~~~~~~~Gad~v~v 224 (244)
T 2y88_A 162 GCSRFVVTDITKDGTLGGP-NLDLL-AGV---ADRTDAPVIASGG---------VSSL---DDLRAIATLTHRGVEGAIV 224 (244)
T ss_dssp TCCCEEEEETTTTTTTSCC-CHHHH-HHH---HTTCSSCEEEESC---------CCSH---HHHHHHHTTGGGTEEEEEE
T ss_pred CCCEEEEEecCCccccCCC-CHHHH-HHH---HHhCCCCEEEECC---------CCCH---HHHHHHHhhccCCCCEEEE
Confidence 88887743332211 122 22222 222 2345889887543 2233 445566666 9999998
Q ss_pred c
Q 008112 415 S 415 (577)
Q Consensus 415 s 415 (577)
.
T Consensus 225 G 225 (244)
T 2y88_A 225 G 225 (244)
T ss_dssp C
T ss_pred c
Confidence 5
No 174
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=61.07 E-value=39 Score=33.77 Aligned_cols=97 Identities=19% Similarity=0.199 Sum_probs=59.4
Q ss_pred HHHHHHHhcCCCEEEE------cCCCCHHHHHHHHHH-HHhcCCCceEEEeecC---hhhHhhHHHHHHh-cCEEEEcCC
Q 008112 280 DDIKFGVDNKVDFYAV------SFVKDAQVVHELKNY-LKSCGADIHVIVKIES---ADSIPNLHSIITA-SDGAMVARG 348 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~------SfV~sa~dv~~lr~~-l~~~~~~i~IiaKIEt---~~gv~NldeIl~~-sDGImIaRG 348 (577)
+.+++-++.|+|+|.+ ++.-|.++=.++.+. .+..+.+++||+-+=+ .++++....-.+. +|++|+-+-
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (294)
T 2ehh_A 25 NLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVP 104 (294)
T ss_dssp HHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 3456778899999976 233455554444443 4445668999998743 5666665555554 999998654
Q ss_pred CccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 349 DLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
.+.- .+.+.+. +..-..|.+.+.|+++.
T Consensus 105 ~y~~-~s~~~l~---~~f~~va~a~~lPiilY 132 (294)
T 2ehh_A 105 YYNK-PTQRGLY---EHFKTVAQEVDIPIIIY 132 (294)
T ss_dssp CSSC-CCHHHHH---HHHHHHHHHCCSCEEEE
T ss_pred CCCC-CCHHHHH---HHHHHHHHhcCCCEEEE
Confidence 4321 1222333 33334455678999875
No 175
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=61.00 E-value=14 Score=37.58 Aligned_cols=145 Identities=18% Similarity=0.135 Sum_probs=87.6
Q ss_pred CCCCccCHHHH-HHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHH-------h-cCE
Q 008112 272 PSITEKDWDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT-------A-SDG 342 (577)
Q Consensus 272 p~ltekD~~dI-~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~-------~-sDG 342 (577)
|.-|+.|.+.+ +.+.+.|+..|+++ +..+..+++.+. +.+++|.+=|=-+.|-...+.-+. . +|.
T Consensus 69 p~~T~~dI~~lc~eA~~~g~aaVCV~----P~~V~~a~~~L~--~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 142 (288)
T 3oa3_A 69 LSATGSQIDVLCAEAKEYGFATVCVR----PDYVSRAVQYLQ--GTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASE 142 (288)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHTT--TSSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHcC--CCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 66677776554 67888999999986 668888888873 456777777765555443332221 1 443
Q ss_pred EEEcCCCccCCCCC---CcHHHHHHHHHHHHHHcCCc---eEEEehhhHhhhcCCCCChHhHHHHHH-HHHhccceEEec
Q 008112 343 AMVARGDLGAELPI---EEVPLLQEEIIRTCRSMGKA---VIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLS 415 (577)
Q Consensus 343 ImIaRGDLg~elg~---e~v~~~qk~Ii~~c~~aGKP---vi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~D~imLs 415 (577)
|=+ -+.++. .+...+.++|-..+...+.| ||+-|-. .|..|+..... +...|+|.|=-|
T Consensus 143 IDm-----VINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~---------Lt~eei~~A~~ia~eaGADfVKTS 208 (288)
T 3oa3_A 143 LDM-----VMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQ---------LTADEIIAGCVLSSLAGADYVKTS 208 (288)
T ss_dssp EEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGG---------CCHHHHHHHHHHHHHTTCSEEECC
T ss_pred EEE-----EeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCC---------CCHHHHHHHHHHHHHcCCCEEEcC
Confidence 321 122222 24455555555544444443 4544433 36777766555 677899999776
Q ss_pred c-ccCCCCCHHHHHHHHHHHHHH
Q 008112 416 G-ETAHGKFPLKAVKVMHTVSLR 437 (577)
Q Consensus 416 ~-ETa~G~yP~eaV~~m~~I~~~ 437 (577)
. =+. |.--++.|+.|+++++.
T Consensus 209 TGf~~-~GAT~edv~lmr~~v~~ 230 (288)
T 3oa3_A 209 TGFNG-PGASIENVSLMSAVCDS 230 (288)
T ss_dssp CSSSS-CCCCHHHHHHHHHHHHH
T ss_pred CCCCC-CCCCHHHHHHHHHHHHH
Confidence 1 112 23346789999999864
No 176
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=60.76 E-value=53 Score=31.37 Aligned_cols=130 Identities=17% Similarity=0.220 Sum_probs=68.0
Q ss_pred HHHHhcCCCEEEEcCC---CCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEcCCCc-cCCCCC--
Q 008112 283 KFGVDNKVDFYAVSFV---KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDL-GAELPI-- 356 (577)
Q Consensus 283 ~~al~~gvD~I~~SfV---~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIaRGDL-g~elg~-- 356 (577)
..+.+.|+|+|.+..- ...+++.++.+...+.| +.++.-+-+.+-.+.+.++ -.+.|-+.+.++ | .|.
T Consensus 76 ~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~G--l~~iv~v~~~~e~~~~~~~--~~~~i~~~~~~~iG--tG~~~ 149 (219)
T 2h6r_A 76 EAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLG--LETIVCTNNINTSKAVAAL--SPDCIAVEPPELIG--TGIPV 149 (219)
T ss_dssp HHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHT--CEEEEEESSSHHHHHHTTT--CCSEEEECCCC----------
T ss_pred HHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCC--CeEEEEeCCchHHHHHHhC--CCCEEEEEeccccc--cCCCC
Confidence 5567899999999885 44566666666665554 3444444333323333222 145666777776 3 221
Q ss_pred -CcHHH-HHHHHHHHHHHc--CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHH
Q 008112 357 -EEVPL-LQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVM 431 (577)
Q Consensus 357 -e~v~~-~qk~Ii~~c~~a--GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m 431 (577)
..-+. ++ .+.+..++. +.|++... ..=+. .++..+...|+|+++..+-.-.-.-|.+.++-+
T Consensus 150 ~t~~~~~~~-~~~~~ir~~~~~~~ii~gg---------GI~~~---~~~~~~~~~gaDgvlVGsAi~~~~d~~~~~~~l 215 (219)
T 2h6r_A 150 SKANPEVVE-GTVRAVKEINKDVKVLCGA---------GISKG---EDVKAALDLGAEGVLLASGVVKAKNVEEAIREL 215 (219)
T ss_dssp ------CSH-HHHHHHHHHCTTCEEEECS---------SCCSH---HHHHHHHTTTCCCEEESHHHHTCSSHHHHHHHH
T ss_pred ccCCHHHHH-HHHHHHHhccCCCeEEEEe---------CcCcH---HHHHHHhhCCCCEEEEcHHHhCcccHHHHHHHH
Confidence 11111 22 333333433 56766532 22233 345556778999999854433345676666654
No 177
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=60.53 E-value=53 Score=33.06 Aligned_cols=97 Identities=15% Similarity=0.115 Sum_probs=59.7
Q ss_pred HHHHHHHhcCCCEEEE------cCCCCHHHHHHHHHH-HHhcCCCceEEEeecC---hhhHhhHHHHHHh-cCEEEEcCC
Q 008112 280 DDIKFGVDNKVDFYAV------SFVKDAQVVHELKNY-LKSCGADIHVIVKIES---ADSIPNLHSIITA-SDGAMVARG 348 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~------SfV~sa~dv~~lr~~-l~~~~~~i~IiaKIEt---~~gv~NldeIl~~-sDGImIaRG 348 (577)
+.+++-++.|+|+|++ .+.-|.++=.++.+. .+..+.+++||+-+=+ .++++....--+. +|++|+-+-
T Consensus 41 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P 120 (304)
T 3cpr_A 41 EVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTP 120 (304)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 3456778899999976 334455555554444 4455668999998743 6666666655554 999998754
Q ss_pred CccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 349 DLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
.+.- .+.+.+...-+ ..|.+.+.|+++.
T Consensus 121 ~y~~-~~~~~l~~~f~---~ia~a~~lPiilY 148 (304)
T 3cpr_A 121 YYSK-PSQEGLLAHFG---AIAAATEVPICLY 148 (304)
T ss_dssp CSSC-CCHHHHHHHHH---HHHHHCCSCEEEE
T ss_pred CCCC-CCHHHHHHHHH---HHHHhcCCCEEEE
Confidence 4321 12223333333 4455668999875
No 178
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=60.44 E-value=51 Score=32.36 Aligned_cols=118 Identities=16% Similarity=0.169 Sum_probs=68.1
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEE--cCCC-ccCCCC
Q 008112 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMV--ARGD-LGAELP 355 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImI--aRGD-Lg~elg 355 (577)
.+.++.+.+.|+|++.++-.. .+++.++.+.+++.|.+ ++.-+.-....+.+.+|.+.++|... +.-+ -|...+
T Consensus 112 ~~f~~~~~~aG~dgvii~dl~-~ee~~~~~~~~~~~gl~--~i~l~~p~t~~~rl~~ia~~a~gfiy~vs~~g~TG~~~~ 188 (262)
T 2ekc_A 112 EKFCRLSREKGIDGFIVPDLP-PEEAEELKAVMKKYVLS--FVPLGAPTSTRKRIKLICEAADEMTYFVSVTGTTGAREK 188 (262)
T ss_dssp HHHHHHHHHTTCCEEECTTCC-HHHHHHHHHHHHHTTCE--ECCEECTTCCHHHHHHHHHHCSSCEEEESSCC-------
T ss_pred HHHHHHHHHcCCCEEEECCCC-HHHHHHHHHHHHHcCCc--EEEEeCCCCCHHHHHHHHHhCCCCEEEEecCCccCCCCC
Confidence 356677788999999998654 47788888888776644 33333332445688888888765432 2211 122222
Q ss_pred CCcHH-HHHHHHHHHHHHc-CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 356 IEEVP-LLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 356 ~e~v~-~~qk~Ii~~c~~a-GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
.+ .-..+.++..+++ +.|+++... .=|.. ++.. +..|+|+++..
T Consensus 189 ---~~~~~~~~~v~~vr~~~~~pv~vG~G---------I~t~e---~~~~-~~~gADgvIVG 234 (262)
T 2ekc_A 189 ---LPYERIKKKVEEYRELCDKPVVVGFG---------VSKKE---HARE-IGSFADGVVVG 234 (262)
T ss_dssp -----CHHHHHHHHHHHHHCCSCEEEESS---------CCSHH---HHHH-HHTTSSEEEEC
T ss_pred ---cCcccHHHHHHHHHhhcCCCEEEeCC---------CCCHH---HHHH-HHcCCCEEEEC
Confidence 11 1222444444444 789887543 22332 3444 67899999974
No 179
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=60.17 E-value=59 Score=31.15 Aligned_cols=144 Identities=15% Similarity=0.164 Sum_probs=78.7
Q ss_pred CCCCccCHHHH-HHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHH-------HHh-cCE
Q 008112 272 PSITEKDWDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSI-------ITA-SDG 342 (577)
Q Consensus 272 p~ltekD~~dI-~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeI-------l~~-sDG 342 (577)
|..|+.|.+.+ +.+.+.|++.++++ ++-+...++.+. .+++.+-++.+.|....... ++. +|+
T Consensus 15 p~~t~~~i~~l~~~a~~~g~~~v~v~----~~~v~~~~~~l~----~v~v~~v~~~P~g~~~~~~k~~~~~~A~~~Gad~ 86 (225)
T 1mzh_A 15 PHLSEKEIEEFVLKSEELGIYAVCVN----PYHVKLASSIAK----KVKVCCVIGFPLGLNKTSVKVKEAVEAVRDGAQE 86 (225)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHHHHHHHCS----SSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCeEEEEC----HHHHHHHHHHhc----CCceeeEecCCCCccchhhhHHHHHHHHHcCCCE
Confidence 55677776555 45667999998743 445666566552 57888888877776544332 222 666
Q ss_pred EE--EcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhccceEEeccccC
Q 008112 343 AM--VARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSGETA 419 (577)
Q Consensus 343 Im--IaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~D~imLs~ETa 419 (577)
|= +.-|-+ .-.+...+.+. +++.+++..|+++-. ++|+ +.-+..|+.+++. +...|+|+|..|.--.
T Consensus 87 Id~viN~g~~----~~~~~~~~~~~-i~~v~~a~~pv~vKv-i~e~----~~l~~~~~~~~a~~a~eaGad~I~tstg~~ 156 (225)
T 1mzh_A 87 LDIVWNLSAF----KSEKYDFVVEE-LKEIFRETPSAVHKV-IVET----PYLNEEEIKKAVEICIEAGADFIKTSTGFA 156 (225)
T ss_dssp EEEECCHHHH----HTTCHHHHHHH-HHHHHHTCTTSEEEE-ECCG----GGCCHHHHHHHHHHHHHHTCSEEECCCSCS
T ss_pred EEEEecHHHH----hcCChHHHHHH-HHHHHHHhcCceEEE-EEeC----CCCCHHHHHHHHHHHHHhCCCEEEECCCCC
Confidence 64 221111 00122334344 666666544876532 2322 3346667777776 4667999994442111
Q ss_pred CCCCHHHHHHHHHH
Q 008112 420 HGKFPLKAVKVMHT 433 (577)
Q Consensus 420 ~G~yP~eaV~~m~~ 433 (577)
.|.+-.+.++.|.+
T Consensus 157 ~gga~~~~i~~v~~ 170 (225)
T 1mzh_A 157 PRGTTLEEVRLIKS 170 (225)
T ss_dssp SSCCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHH
Confidence 23345566666554
No 180
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=60.08 E-value=35 Score=34.29 Aligned_cols=97 Identities=10% Similarity=0.070 Sum_probs=59.7
Q ss_pred HHHHHHHhcCCCEEEE------cCCCCHHHHHHHHHH-HHhcCCCceEEEeecC---hhhHhhHHHHHHh-cCEEEEcCC
Q 008112 280 DDIKFGVDNKVDFYAV------SFVKDAQVVHELKNY-LKSCGADIHVIVKIES---ADSIPNLHSIITA-SDGAMVARG 348 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~------SfV~sa~dv~~lr~~-l~~~~~~i~IiaKIEt---~~gv~NldeIl~~-sDGImIaRG 348 (577)
+.+++-++.|+|+|.+ ++.-|.++=.++.+. .+..+.+++||+-+=+ .++++.....-+. +|++|+-+-
T Consensus 25 ~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (297)
T 2rfg_A 25 GLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAG 104 (297)
T ss_dssp HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3456778899999975 234455555454443 4445667899998744 6666666655555 999999755
Q ss_pred CccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 349 DLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
.+.- .+.+.+...-+ ..|.+.+.|+++.
T Consensus 105 ~y~~-~s~~~l~~~f~---~va~a~~lPiilY 132 (297)
T 2rfg_A 105 YYNR-PSQEGLYQHFK---MVHDAIDIPIIVY 132 (297)
T ss_dssp TTTC-CCHHHHHHHHH---HHHHHCSSCEEEE
T ss_pred CCCC-CCHHHHHHHHH---HHHHhcCCCEEEE
Confidence 4421 12223333334 4455668999875
No 181
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=60.04 E-value=18 Score=36.51 Aligned_cols=65 Identities=8% Similarity=0.125 Sum_probs=48.3
Q ss_pred cCHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcC
Q 008112 277 KDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVAR 347 (577)
Q Consensus 277 kD~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaR 347 (577)
.+.++++.+++.|+|+|.+..+ ++++++++++.+. .++++.+ +=.. -.+|+.++++. +|+|-++.
T Consensus 204 ~t~eea~eA~~aGaD~I~ld~~-~~~~~k~av~~v~---~~ipi~A-sGGI-t~eni~~~a~tGvD~IsVgs 269 (286)
T 1x1o_A 204 RSLEELEEALEAGADLILLDNF-PLEALREAVRRVG---GRVPLEA-SGNM-TLERAKAAAEAGVDYVSVGA 269 (286)
T ss_dssp SSHHHHHHHHHHTCSEEEEESC-CHHHHHHHHHHHT---TSSCEEE-ESSC-CHHHHHHHHHHTCSEEECTH
T ss_pred CCHHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhC---CCCeEEE-EcCC-CHHHHHHHHHcCCCEEEEcH
Confidence 4588889999999999999986 7788887777663 3455555 1111 25799999988 99999873
No 182
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=59.96 E-value=26 Score=35.60 Aligned_cols=96 Identities=5% Similarity=0.061 Sum_probs=57.2
Q ss_pred HHHHHHhcCCCEEEEc------CCCCHHHHHHHHH-HHHhcCCCceEEEeec---ChhhHhhHHHHHHh-cCEEEEcCCC
Q 008112 281 DIKFGVDNKVDFYAVS------FVKDAQVVHELKN-YLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGD 349 (577)
Q Consensus 281 dI~~al~~gvD~I~~S------fV~sa~dv~~lr~-~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDGImIaRGD 349 (577)
.+++-++.|+|+|.+. +--|.++=.++.+ ..+..+.+++||+-+= |.++++.....-+. +|++|+-+-.
T Consensus 48 li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~ 127 (315)
T 3si9_A 48 FVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPY 127 (315)
T ss_dssp HHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 3467788999999742 2224444444443 4445567889998764 55555555555555 8999987544
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 350 Lg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
+.- .+.+.+...-+ ..|.+.+.|+++.
T Consensus 128 y~~-~~~~~l~~~f~---~va~a~~lPiilY 154 (315)
T 3si9_A 128 YNR-PNQRGLYTHFS---SIAKAISIPIIIY 154 (315)
T ss_dssp SSC-CCHHHHHHHHH---HHHHHCSSCEEEE
T ss_pred CCC-CCHHHHHHHHH---HHHHcCCCCEEEE
Confidence 321 12223433334 4455568999975
No 183
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=59.88 E-value=36 Score=33.57 Aligned_cols=121 Identities=18% Similarity=0.198 Sum_probs=73.2
Q ss_pred HHHHHHHhcCCCEEE--E---cCCCCHHHHHHHHHHHHhcCCCceEEEeecChh------------hHhhHHHHHHh--c
Q 008112 280 DDIKFGVDNKVDFYA--V---SFVKDAQVVHELKNYLKSCGADIHVIVKIESAD------------SIPNLHSIITA--S 340 (577)
Q Consensus 280 ~dI~~al~~gvD~I~--~---SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~------------gv~NldeIl~~--s 340 (577)
..++.+.+.|+|.|= + ....+.+++.+....+.+.-.++++|.-+-|.. -++=+...++. +
T Consensus 36 ~~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~~ll~~~~~~g~~ 115 (257)
T 2yr1_A 36 REAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPLNEAEVRRLIEAICRSGAI 115 (257)
T ss_dssp HHHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSSCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCCCHHHHHHHHHHHHHcCCC
Confidence 334455667888763 2 223455666655555544323577887665431 12223333432 5
Q ss_pred CEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhccceEEec
Q 008112 341 DGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLS 415 (577)
Q Consensus 341 DGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~D~imLs 415 (577)
|.|=| |+...+ ..+++++.+++.|..+|..-+-++ .+|+..|+...++ +...|+|.+=+.
T Consensus 116 d~iDv-------El~~~~---~~~~l~~~~~~~~~kvI~S~Hdf~-----~tP~~~el~~~~~~~~~~gaDivKia 176 (257)
T 2yr1_A 116 DLVDY-------ELAYGE---RIADVRRMTEECSVWLVVSRHYFD-----GTPRKETLLADMRQAERYGADIAKVA 176 (257)
T ss_dssp SEEEE-------EGGGTT---HHHHHHHHHHHTTCEEEEEEEESS-----CCCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CEEEE-------ECCCCh---hHHHHHHHHHhCCCEEEEEecCCC-----CCcCHHHHHHHHHHHHhcCCCEEEEE
Confidence 55544 443333 666788889999999999877554 4788888766665 667899987764
No 184
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=59.39 E-value=46 Score=32.71 Aligned_cols=119 Identities=15% Similarity=0.074 Sum_probs=69.7
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEE-E-cCCCc-cCCCC
Q 008112 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAM-V-ARGDL-GAELP 355 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGIm-I-aRGDL-g~elg 355 (577)
.+.++.+.+.|+|+|.++-... +++.++.+.+++.|.+ .+.-+.-....+.+.+|++.++|.+ + ..-.. |...+
T Consensus 112 ~~~~~~~~~aGadgii~~d~~~-e~~~~~~~~~~~~g~~--~i~l~~p~t~~~~i~~i~~~~~g~v~~~s~~G~tG~~~~ 188 (268)
T 1qop_A 112 DAFYARCEQVGVDSVLVADVPV-EESAPFRQAALRHNIA--PIFICPPNADDDLLRQVASYGRGYTYLLSRSGVTGAENR 188 (268)
T ss_dssp HHHHHHHHHHTCCEEEETTCCG-GGCHHHHHHHHHTTCE--EECEECTTCCHHHHHHHHHHCCSCEEEESSSSCCCSSSC
T ss_pred HHHHHHHHHcCCCEEEEcCCCH-HHHHHHHHHHHHcCCc--EEEEECCCCCHHHHHHHHhhCCCcEEEEecCCcCCCccC
Confidence 4566777889999999987654 6788888888876643 2333322234568888988877432 2 22111 22212
Q ss_pred CC-cHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 356 IE-EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 356 ~e-~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
.. .+...-+++- +..+.|+++...+ =|. .++..++..|+|+++..
T Consensus 189 ~~~~~~~~i~~lr---~~~~~pi~vggGI---------~t~---e~~~~~~~agAD~vVVG 234 (268)
T 1qop_A 189 GALPLHHLIEKLK---EYHAAPALQGFGI---------SSP---EQVSAAVRAGAAGAISG 234 (268)
T ss_dssp C--CCHHHHHHHH---HTTCCCEEEESSC---------CSH---HHHHHHHHTTCSEEEEC
T ss_pred CCchHHHHHHHHH---hccCCcEEEECCC---------CCH---HHHHHHHHcCCCEEEEC
Confidence 11 2222222221 1237898875442 223 34667788999999974
No 185
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=59.25 E-value=35 Score=34.38 Aligned_cols=96 Identities=15% Similarity=0.054 Sum_probs=59.2
Q ss_pred HHHHHHhcCCCEEEE------cCCCCHHHHHHHHHH-HHhcCCCceEEEeec---ChhhHhhHHHHHHh-cCEEEEcCCC
Q 008112 281 DIKFGVDNKVDFYAV------SFVKDAQVVHELKNY-LKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGD 349 (577)
Q Consensus 281 dI~~al~~gvD~I~~------SfV~sa~dv~~lr~~-l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDGImIaRGD 349 (577)
.+++-++.|+|+|++ .+.-|.++=.++.+. .+..+.+++||+-+= |.++++.....-+. +|++|+-+-.
T Consensus 38 lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 117 (301)
T 1xky_A 38 LVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPY 117 (301)
T ss_dssp HHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 346778899999976 234455555444443 445566889999874 36666666665555 9999986544
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 350 Lg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
+.- .+.+.+...-+ ..|.+.+.|+++.
T Consensus 118 y~~-~s~~~l~~~f~---~va~a~~lPiilY 144 (301)
T 1xky_A 118 YNK-PSQEGMYQHFK---AIAESTPLPVMLY 144 (301)
T ss_dssp SSC-CCHHHHHHHHH---HHHHTCSSCEEEE
T ss_pred CCC-CCHHHHHHHHH---HHHHhcCCCEEEE
Confidence 321 12223333333 4455668999975
No 186
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=59.09 E-value=18 Score=37.67 Aligned_cols=73 Identities=21% Similarity=0.208 Sum_probs=48.1
Q ss_pred CHHHHHHHHhcCCCEEEEcC------------CCCHHHHHHHHHH----HHhcCC-CceEEEeecChhhHhhHHHHHHh-
Q 008112 278 DWDDIKFGVDNKVDFYAVSF------------VKDAQVVHELKNY----LKSCGA-DIHVIVKIESADSIPNLHSIITA- 339 (577)
Q Consensus 278 D~~dI~~al~~gvD~I~~Sf------------V~sa~dv~~lr~~----l~~~~~-~i~IiaKIEt~~gv~NldeIl~~- 339 (577)
+.++.+.+.+.|+|+|.++. +.+.+.+.++++. +.+.+. ++.||+- -||.+-.+|+++
T Consensus 221 t~e~a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~----GGI~~~~dv~kal 296 (393)
T 2qr6_A 221 DYTTALHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIAD----GSIENSGDVVKAI 296 (393)
T ss_dssp SHHHHHHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEEC----SSCCSHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEE----CCCCCHHHHHHHH
Confidence 45678888999999999975 4445555555554 232343 3888882 345545555543
Q ss_pred ---cCEEEEcCCCccCCC
Q 008112 340 ---SDGAMVARGDLGAEL 354 (577)
Q Consensus 340 ---sDGImIaRGDLg~el 354 (577)
+|++++||.=|...-
T Consensus 297 alGA~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 297 ACGADAVVLGSPLARAEE 314 (393)
T ss_dssp HHTCSEEEECGGGGGSTT
T ss_pred HcCCCEEEECHHHHcCCC
Confidence 999999998665543
No 187
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=59.08 E-value=41 Score=32.65 Aligned_cols=100 Identities=16% Similarity=0.208 Sum_probs=59.5
Q ss_pred HHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCCCccCCCCCCcHHHH
Q 008112 284 FGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIEEVPLL 362 (577)
Q Consensus 284 ~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGDLg~elg~e~v~~~ 362 (577)
..++.|++.|=++| +++.-++.++.+-++. .+..|-+ -|..-.+..+..+++ +|.|+ .++ .
T Consensus 33 al~~gGi~~iEvt~-~t~~a~~~I~~l~~~~-p~~~IGA--GTVlt~~~a~~ai~AGA~fiv-sP~-------------~ 94 (217)
T 3lab_A 33 ALVAGGVHLLEVTL-RTEAGLAAISAIKKAV-PEAIVGA--GTVCTADDFQKAIDAGAQFIV-SPG-------------L 94 (217)
T ss_dssp HHHHTTCCEEEEET-TSTTHHHHHHHHHHHC-TTSEEEE--ECCCSHHHHHHHHHHTCSEEE-ESS-------------C
T ss_pred HHHHcCCCEEEEeC-CCccHHHHHHHHHHHC-CCCeEee--ccccCHHHHHHHHHcCCCEEE-eCC-------------C
Confidence 34566777777776 4454444444433332 3333333 355555555555555 55554 333 2
Q ss_pred HHHHHHHHHHcCC------ceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 363 QEEIIRTCRSMGK------AVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 363 qk~Ii~~c~~aGK------Pvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
-.++++.|+++|. |++=- .-|. +++..|...|+|.+-+-
T Consensus 95 ~~evi~~~~~~~v~~~~~~~~~PG-----------~~Tp---tE~~~A~~~Gad~vK~F 139 (217)
T 3lab_A 95 TPELIEKAKQVKLDGQWQGVFLPG-----------VATA---SEVMIAAQAGITQLKCF 139 (217)
T ss_dssp CHHHHHHHHHHHHHCSCCCEEEEE-----------ECSH---HHHHHHHHTTCCEEEET
T ss_pred cHHHHHHHHHcCCCccCCCeEeCC-----------CCCH---HHHHHHHHcCCCEEEEC
Confidence 4578899999999 87521 1133 44778999999999774
No 188
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=58.94 E-value=53 Score=31.05 Aligned_cols=111 Identities=23% Similarity=0.248 Sum_probs=66.5
Q ss_pred HHHHHHHHhcCCCEEEEc-----CCCC----HHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCC
Q 008112 279 WDDIKFGVDNKVDFYAVS-----FVKD----AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARG 348 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~S-----fV~s----a~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRG 348 (577)
.++++.+.+.|+|+|-+- |+.+ .+.++++++.+ +..+.+..++..++ +.++...++ +|+|.+.-.
T Consensus 26 ~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~---~~~~~v~l~vnd~~--~~v~~~~~~Gad~v~vh~~ 100 (230)
T 1rpx_A 26 GEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPIT---DLPLDVHLMIVEPD--QRVPDFIKAGADIVSVHCE 100 (230)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGC---CSCEEEEEESSSHH--HHHHHHHHTTCSEEEEECS
T ss_pred HHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhcc---CCcEEEEEEecCHH--HHHHHHHHcCCCEEEEEec
Confidence 455677788999998773 5554 45565555432 33455667887743 456666655 899988621
Q ss_pred CccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEe
Q 008112 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML 414 (577)
Q Consensus 349 DLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imL 414 (577)
.. +.+.. .+.++.++++|+.++++.. |. |..| ...++..++|.+++
T Consensus 101 -~~---~~~~~----~~~~~~~~~~g~~ig~~~~--------p~-t~~e---~~~~~~~~~d~vl~ 146 (230)
T 1rpx_A 101 -QS---STIHL----HRTINQIKSLGAKAGVVLN--------PG-TPLT---AIEYVLDAVDLVLI 146 (230)
T ss_dssp -TT---TCSCH----HHHHHHHHHTTSEEEEEEC--------TT-CCGG---GGTTTTTTCSEEEE
T ss_pred -Cc---cchhH----HHHHHHHHHcCCcEEEEeC--------CC-CCHH---HHHHHHhhCCEEEE
Confidence 00 11222 4667778888999888742 11 2222 12344578998854
No 189
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=58.87 E-value=50 Score=31.82 Aligned_cols=128 Identities=15% Similarity=0.087 Sum_probs=61.2
Q ss_pred cCHHHHHHHHhcCCCEEEEcCCCCHH--HHHHHHHHHHhcC--CCceEEEe-----------ecChh--------hHhhH
Q 008112 277 KDWDDIKFGVDNKVDFYAVSFVKDAQ--VVHELKNYLKSCG--ADIHVIVK-----------IESAD--------SIPNL 333 (577)
Q Consensus 277 kD~~dI~~al~~gvD~I~~SfV~sa~--dv~~lr~~l~~~~--~~i~IiaK-----------IEt~~--------gv~Nl 333 (577)
.+.+++..+++.|+|+|.+.-.---. +...+++++...+ .+ .++.- +++.. ..+-+
T Consensus 84 ~~~~~i~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~-~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~ 162 (266)
T 2w6r_A 84 GKMEHFLEAFLAGADKALAASVFHFREIDMRELKEYLKKHGGSGQ-AVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWV 162 (266)
T ss_dssp CSTHHHHHHHHHTCSEEECCCCC------CHHHHHHCC----CCC-EEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHH
T ss_pred CCHHHHHHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCC-EEEEEEEEEecCCCEEEEECCCceecchhHHHHH
Confidence 34577888888999999886431101 4555666554444 21 12222 22221 12223
Q ss_pred HHHHHh-cCEEEEcC-CCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccce
Q 008112 334 HSIITA-SDGAMVAR-GDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADA 411 (577)
Q Consensus 334 deIl~~-sDGImIaR-GDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~ 411 (577)
..+.+. ++.|++-. .--|...+. .+. .+-+.+...+.|++.... .-+.. |+..+...|+|+
T Consensus 163 ~~~~~~G~~~i~~t~~~~~g~~~g~-~~~----~i~~l~~~~~ipvia~GG---------I~~~e---d~~~~~~~Gadg 225 (266)
T 2w6r_A 163 VEVEKRGAGEILLTSIDRDGTKSGY-DTE----MIRFVRPLTTLPIIASGG---------AGKME---HFLEAFLAGADA 225 (266)
T ss_dssp HHHHHTTCSEEEEEETTTTTTCSCC-CHH----HHHHHGGGCCSCEEEESC---------CCSHH---HHHHHHHHTCSE
T ss_pred HHHHHcCCCEEEEEeecCCCCcCCC-CHH----HHHHHHHHcCCCEEEeCC---------CCCHH---HHHHHHHcCCHH
Confidence 333333 77777731 111222232 221 222223445899987543 33333 566666679999
Q ss_pred EEeccccCCCC
Q 008112 412 VMLSGETAHGK 422 (577)
Q Consensus 412 imLs~ETa~G~ 422 (577)
+++..---.+.
T Consensus 226 v~vgsal~~~~ 236 (266)
T 2w6r_A 226 ALAASVFHFRE 236 (266)
T ss_dssp EEESTTTC---
T ss_pred HHccHHHHcCC
Confidence 99864333334
No 190
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=58.74 E-value=1.1e+02 Score=29.42 Aligned_cols=92 Identities=11% Similarity=0.102 Sum_probs=52.1
Q ss_pred cCHHHHHHHHhcCCCEEEE--cCCC--------------------CHHHHHHHHHHHHhcCCCceEEEee-cChhhHhhH
Q 008112 277 KDWDDIKFGVDNKVDFYAV--SFVK--------------------DAQVVHELKNYLKSCGADIHVIVKI-ESADSIPNL 333 (577)
Q Consensus 277 kD~~dI~~al~~gvD~I~~--SfV~--------------------sa~dv~~lr~~l~~~~~~i~IiaKI-Et~~gv~Nl 333 (577)
.-.+.++...+.|+|+|-+ ||-. +.++..++.+.+.+. .+++++.+. .++.-...+
T Consensus 33 ~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~-~~~Pv~~m~~~~~~~~~~~ 111 (262)
T 1rd5_A 33 TTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE-LSCPVVLLSYYKPIMFRSL 111 (262)
T ss_dssp HHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG-CSSCEEEECCSHHHHSCCT
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCEEEEecCcHHHHHHH
Confidence 3455667777899999766 4431 333333333334333 456677653 222111123
Q ss_pred HHHHHh-cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEE
Q 008112 334 HSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIV 379 (577)
Q Consensus 334 deIl~~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ 379 (577)
+...++ +||+.+. |+.. ++ -.+++..|+++|.+.++
T Consensus 112 ~~a~~aGadgv~v~--d~~~----~~----~~~~~~~~~~~g~~~i~ 148 (262)
T 1rd5_A 112 AKMKEAGVHGLIVP--DLPY----VA----AHSLWSEAKNNNLELVL 148 (262)
T ss_dssp HHHHHTTCCEEECT--TCBT----TT----HHHHHHHHHHTTCEECE
T ss_pred HHHHHcCCCEEEEc--CCCh----hh----HHHHHHHHHHcCCceEE
Confidence 334444 8999984 5544 33 35677789999988654
No 191
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=58.60 E-value=61 Score=32.72 Aligned_cols=95 Identities=16% Similarity=0.133 Sum_probs=57.4
Q ss_pred HHHHHHHhcCCCEEEEc------CCCCHHHHHHHHH-HHHhcCCCceEEEee---cChhhHhhHHHHHHh-cCEEEEcCC
Q 008112 280 DDIKFGVDNKVDFYAVS------FVKDAQVVHELKN-YLKSCGADIHVIVKI---ESADSIPNLHSIITA-SDGAMVARG 348 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~S------fV~sa~dv~~lr~-~l~~~~~~i~IiaKI---Et~~gv~NldeIl~~-sDGImIaRG 348 (577)
+.+++-++.|+|+|++. +--|.++=.++.+ .++.. .+++||+-+ -|.++++......+. +|++|+-+-
T Consensus 33 ~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 111 (313)
T 3dz1_A 33 RLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPP 111 (313)
T ss_dssp HHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 34567789999999773 3334444444444 44555 679999986 345556555555554 999999755
Q ss_pred CccCCCCCCcHHHHHHHHHHHHHHcC--CceEEE
Q 008112 349 DLGAELPIEEVPLLQEEIIRTCRSMG--KAVIVA 380 (577)
Q Consensus 349 DLg~elg~e~v~~~qk~Ii~~c~~aG--KPvi~A 380 (577)
.. -.+.+.+... .-..|.+.+ .|+++.
T Consensus 112 ~~--~~s~~~l~~~---f~~va~a~~~~lPiilY 140 (313)
T 3dz1_A 112 PS--LRTDEQITTY---FRQATEAIGDDVPWVLQ 140 (313)
T ss_dssp TT--CCSHHHHHHH---HHHHHHHHCTTSCEEEE
T ss_pred CC--CCCHHHHHHH---HHHHHHhCCCCCcEEEE
Confidence 42 1222233333 334445556 999875
No 192
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=58.30 E-value=1.4e+02 Score=30.90 Aligned_cols=109 Identities=15% Similarity=0.184 Sum_probs=72.4
Q ss_pred HHHHHhcCCCEEEEcCCC-----------CHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEcCCCc
Q 008112 282 IKFGVDNKVDFYAVSFVK-----------DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDL 350 (577)
Q Consensus 282 I~~al~~gvD~I~~SfV~-----------sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIaRGDL 350 (577)
++.+.+.|+|++-.-+-. ..+.++.++++..+. .+.+++-+-..+.++-+.+. +|.+-||-+++
T Consensus 126 a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~--Gl~~~te~~d~~~~~~l~~~---vd~lkIgAr~~ 200 (350)
T 1vr6_A 126 AHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKY--GMYVVTEALGEDDLPKVAEY---ADIIQIGARNA 200 (350)
T ss_dssp HHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECSSGGGHHHHHHH---CSEEEECGGGT
T ss_pred HHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHc--CCcEEEEeCCHHHHHHHHHh---CCEEEECcccc
Confidence 344556777765332111 257888888888765 47888888887776666554 89999985554
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHH-hccceEEe
Q 008112 351 GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVR-EGADAVML 414 (577)
Q Consensus 351 g~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~-~G~D~imL 414 (577)
+. ..+++.+.+.||||++.|.|. .|-.|+...++++. .|.+-++|
T Consensus 201 ------~n-----~~LL~~va~~~kPVilk~G~~--------~tl~ei~~Ave~i~~~GN~~viL 246 (350)
T 1vr6_A 201 ------QN-----FRLLSKAGSYNKPVLLKRGFM--------NTIEEFLLSAEYIANSGNTKIIL 246 (350)
T ss_dssp ------TC-----HHHHHHHHTTCSCEEEECCTT--------CCHHHHHHHHHHHHHTTCCCEEE
T ss_pred ------cC-----HHHHHHHHccCCcEEEcCCCC--------CCHHHHHHHHHHHHHCCCCeEEE
Confidence 22 224555557899999976643 47788888888665 46644555
No 193
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=58.29 E-value=14 Score=38.53 Aligned_cols=45 Identities=27% Similarity=0.362 Sum_probs=35.6
Q ss_pred EEEecCCCCCCHHHHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHH
Q 008112 112 IVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKE 158 (577)
Q Consensus 112 Ii~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~ 158 (577)
+.+-+|... .+.++.++++|++++-||++||..+.+.+.++.+|+
T Consensus 98 vga~ig~~~--~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~ 142 (361)
T 3khj_A 98 VGAAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS 142 (361)
T ss_dssp CEEEECTTC--HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHH
T ss_pred EEEEeCCCH--HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHH
Confidence 445555533 899999999999999999999988777677666664
No 194
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=58.19 E-value=49 Score=33.66 Aligned_cols=128 Identities=13% Similarity=0.120 Sum_probs=67.5
Q ss_pred CCCccCHHHH--------HHHHhcCCCEEEEcC-------------CCC------------HHHHHHHHHHHHhcCCCce
Q 008112 273 SITEKDWDDI--------KFGVDNKVDFYAVSF-------------VKD------------AQVVHELKNYLKSCGADIH 319 (577)
Q Consensus 273 ~ltekD~~dI--------~~al~~gvD~I~~Sf-------------V~s------------a~dv~~lr~~l~~~~~~i~ 319 (577)
.||..|++.+ +.+.+.|+|+|=+-. .+. +.-+.++.+.+.+.- +..
T Consensus 133 ~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~p 211 (338)
T 1z41_A 133 EMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGP 211 (338)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCc
Confidence 5777776655 455788999986533 221 122334444443332 677
Q ss_pred EEEeecCh------hhHhhHHHHHH----h-cCEEEEcCCCcc-CCCCCCcHHHHHHHHHH-HHHHcCCceEEEehhhHh
Q 008112 320 VIVKIESA------DSIPNLHSIIT----A-SDGAMVARGDLG-AELPIEEVPLLQEEIIR-TCRSMGKAVIVATNMLES 386 (577)
Q Consensus 320 IiaKIEt~------~gv~NldeIl~----~-sDGImIaRGDLg-~elg~e~v~~~qk~Ii~-~c~~aGKPvi~ATq~LeS 386 (577)
|..||--- ...++..++++ . +|+|-+.-|... ...+... ..+-..++ ..+..++|++....+
T Consensus 212 v~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~--~~~~~~~~~ir~~~~iPVi~~Ggi--- 286 (338)
T 1z41_A 212 LFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFP--GYQVSFAEKIREQADMATGAVGMI--- 286 (338)
T ss_dssp EEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCT--TTTHHHHHHHHHHHCCEEEECSSC---
T ss_pred EEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCc--cchHHHHHHHHHHCCCCEEEECCC---
Confidence 88897331 11223333333 2 788888765432 1111111 11112222 223348998874432
Q ss_pred hhcCCCCChHhHHHHHHHHHhc-cceEEec
Q 008112 387 MIVHPTPTRAEVSDIAIAVREG-ADAVMLS 415 (577)
Q Consensus 387 M~~~~~PtrAEv~Dv~nav~~G-~D~imLs 415 (577)
-+. .++..++..| +|+|++.
T Consensus 287 ------~s~---~~a~~~l~~G~aD~V~iG 307 (338)
T 1z41_A 287 ------TDG---SMAEEILQNGRADLIFIG 307 (338)
T ss_dssp ------CSH---HHHHHHHHTTSCSEEEEC
T ss_pred ------CCH---HHHHHHHHcCCceEEeec
Confidence 233 3466788888 9999985
No 195
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=57.45 E-value=46 Score=33.37 Aligned_cols=96 Identities=11% Similarity=0.074 Sum_probs=57.4
Q ss_pred HHHHHHhcCCCEEEEcC------CCCHHHHHHHHH-HHHhcCCCceEEEeec---ChhhHhhHHHHHHh-cCEEEEcCCC
Q 008112 281 DIKFGVDNKVDFYAVSF------VKDAQVVHELKN-YLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGD 349 (577)
Q Consensus 281 dI~~al~~gvD~I~~Sf------V~sa~dv~~lr~-~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDGImIaRGD 349 (577)
.+++-++.|+|+|.+.= --|.++=.++.+ ..+..+.+++||+-+= |.++++......+. +|++|+-+-.
T Consensus 33 lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 112 (297)
T 3flu_A 33 LIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPY 112 (297)
T ss_dssp HHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 45677889999997632 123444444433 3444567799999764 45555555555554 8999987544
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 350 Lg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
+.- ...+.+. +..-..|.+.+.|+++.
T Consensus 113 y~~-~~~~~l~---~~f~~va~a~~lPiilY 139 (297)
T 3flu_A 113 YNK-PSQEGIY---QHFKTIAEATSIPMIIY 139 (297)
T ss_dssp SSC-CCHHHHH---HHHHHHHHHCCSCEEEE
T ss_pred CCC-CCHHHHH---HHHHHHHHhCCCCEEEE
Confidence 321 1222333 34444455569999976
No 196
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=57.36 E-value=40 Score=33.68 Aligned_cols=97 Identities=14% Similarity=0.105 Sum_probs=58.3
Q ss_pred HHHHHHHhcCCCEEEE------cCCCCHHHHHHHHH-HHHhcCCCceEEEeecC---hhhHhhHHHHHHh-cCEEEEcCC
Q 008112 280 DDIKFGVDNKVDFYAV------SFVKDAQVVHELKN-YLKSCGADIHVIVKIES---ADSIPNLHSIITA-SDGAMVARG 348 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~------SfV~sa~dv~~lr~-~l~~~~~~i~IiaKIEt---~~gv~NldeIl~~-sDGImIaRG 348 (577)
+.+++-++.|+|+|.+ ++.-|.++=.++.+ ..+..+.+++||+-+=+ .++++....--+. +|++|+-+-
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (292)
T 2vc6_A 25 DLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSP 104 (292)
T ss_dssp HHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 3456778899999975 23345544444444 34445667889998743 5666655555554 999998654
Q ss_pred CccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 349 DLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
.+.- .+.+.+...-+ ..|.+.+.|+++.
T Consensus 105 ~y~~-~s~~~l~~~f~---~ia~a~~lPiilY 132 (292)
T 2vc6_A 105 YYNK-PTQEGIYQHFK---AIDAASTIPIIVY 132 (292)
T ss_dssp CSSC-CCHHHHHHHHH---HHHHHCSSCEEEE
T ss_pred CCCC-CCHHHHHHHHH---HHHHhCCCCEEEE
Confidence 4321 12223333333 3455668999874
No 197
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=56.95 E-value=13 Score=38.96 Aligned_cols=50 Identities=18% Similarity=0.308 Sum_probs=40.3
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHH
Q 008112 109 KTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKE 158 (577)
Q Consensus 109 ~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~ 158 (577)
+..+.+.+|+.....+.++.++++|++.+=||++||+++...+.++.+|+
T Consensus 141 ~~~~~~~i~~~~~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~ 190 (404)
T 1eep_A 141 KLRVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKT 190 (404)
T ss_dssp CBCCEEEECSCTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHH
T ss_pred CceEEEEeCCChhHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHH
Confidence 34567778865567888999999999999999999998777777777775
No 198
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=56.74 E-value=11 Score=36.16 Aligned_cols=60 Identities=18% Similarity=0.311 Sum_probs=43.7
Q ss_pred EEcCCCEEEEEEecC--C---CCceEEecccccccc--ccCCCCEEEEe--CCeEEEEEEEEeCCeEEE
Q 008112 189 TLTSGQEFTFTIQRG--V---GSAECVSVNYDDFVN--DVEVGDMLLVD--GGMMSLLVKSKTEDSVKC 248 (577)
Q Consensus 189 ~L~~G~~v~lt~~~~--~---~~~~~i~v~~~~~~~--~v~~Gd~I~id--DG~i~l~V~~v~~~~v~~ 248 (577)
-++.|++++|+.... . +......++...|.. .+++|+.+.+. +|.+..+|++++++.|+.
T Consensus 51 Gm~vGe~~~v~Ippe~aYGe~~~~lV~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~~~~V~v 119 (196)
T 2kfw_A 51 GHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVVV 119 (196)
T ss_dssp SSCTTCEEEEECSTTTTSSCCCTTTCEEECGGGCCCSSCCCTTCEEEEEETTEEEEEEBCCCCSSSEEE
T ss_pred CCCCCCEEEEEeCcHHhcCCCChhhEEEEEHHHCCCccCcccCCEEEEECCCCcEEEEEEEEcCCEEEE
Confidence 468999999998632 2 233445566667764 58999999997 567778899998887753
No 199
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=56.45 E-value=47 Score=33.16 Aligned_cols=97 Identities=8% Similarity=0.086 Sum_probs=57.5
Q ss_pred HHHHHHHhcCCCEEEEcCCC------CHHHHHHHHHH-HHhcCCCceEEEeec---ChhhHhhHHHHHHh-cCEEEEcCC
Q 008112 280 DDIKFGVDNKVDFYAVSFVK------DAQVVHELKNY-LKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARG 348 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV~------sa~dv~~lr~~-l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDGImIaRG 348 (577)
+.+++-++.|+|++.+.=-. |.++=.++.+. .+..+.+++||+-+= |.++++.....-+. +|++|+-+-
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (291)
T 3tak_A 26 KLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTP 105 (291)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 34567788999998753221 33444444333 344566789999764 45555555555544 999998754
Q ss_pred CccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 349 DLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
.+.- ...+.+...-+.| |.+.+.|+++.
T Consensus 106 ~y~~-~~~~~l~~~f~~i---a~a~~lPiilY 133 (291)
T 3tak_A 106 YYNK-PTQEGLYQHYKAI---AEAVELPLILY 133 (291)
T ss_dssp CSSC-CCHHHHHHHHHHH---HHHCCSCEEEE
T ss_pred CCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 4421 1223344333444 55569999975
No 200
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=56.23 E-value=18 Score=38.64 Aligned_cols=100 Identities=12% Similarity=0.068 Sum_probs=56.3
Q ss_pred CCCCccCHHHHH-HHHhcCCCEEEEcCCCC---------------------HHHHHHHHHHHHhcCCCceEEEe--ecCh
Q 008112 272 PSITEKDWDDIK-FGVDNKVDFYAVSFVKD---------------------AQVVHELKNYLKSCGADIHVIVK--IESA 327 (577)
Q Consensus 272 p~ltekD~~dI~-~al~~gvD~I~~SfV~s---------------------a~dv~~lr~~l~~~~~~i~IiaK--IEt~ 327 (577)
|.+++.|..++. .+.+.|+|+|.++.-.. +..++.+++.-+..+.++.||+- |.|.
T Consensus 278 pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~ 357 (415)
T 3i65_A 278 PDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSG 357 (415)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSH
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCH
Confidence 556665655554 45689999999986321 11223344433334557888873 5554
Q ss_pred hhHhhHHHHHHh-cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCc
Q 008112 328 DSIPNLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKA 376 (577)
Q Consensus 328 ~gv~NldeIl~~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKP 376 (577)
+- +.+.+.. +|+|+|+|+=+.- |..-+..+.+.+-....+.|..
T Consensus 358 eD---a~e~l~aGAd~VqIgra~l~~--GP~~~~~i~~~L~~~l~~~G~~ 402 (415)
T 3i65_A 358 LD---ALEKIEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGYY 402 (415)
T ss_dssp HH---HHHHHHHTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHTTCS
T ss_pred HH---HHHHHHcCCCEEEEcHHHHhc--CHHHHHHHHHHHHHHHHHcCCC
Confidence 32 2222223 9999999985521 2333445555555555555543
No 201
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=56.02 E-value=45 Score=33.63 Aligned_cols=96 Identities=15% Similarity=0.149 Sum_probs=59.0
Q ss_pred HHHHHHhcCCCEEEE------cCCCCHHHHHHHHHH-HHhcCCCceEEEeecC---hhhHhhHHHHHHh-cCEEEEcCCC
Q 008112 281 DIKFGVDNKVDFYAV------SFVKDAQVVHELKNY-LKSCGADIHVIVKIES---ADSIPNLHSIITA-SDGAMVARGD 349 (577)
Q Consensus 281 dI~~al~~gvD~I~~------SfV~sa~dv~~lr~~-l~~~~~~i~IiaKIEt---~~gv~NldeIl~~-sDGImIaRGD 349 (577)
.+++-++.|+|+|++ .+--|.++=.++.+. .+..+.+++||+-+=+ .++++....--+. +|++|+-+-.
T Consensus 38 lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~ 117 (306)
T 1o5k_A 38 LVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPY 117 (306)
T ss_dssp HHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 346778899999976 334455555554444 4455667899998743 6666666555554 9999986544
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 350 Lg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
+.- .+.+.+...-+ ..|.+.+.|+++.
T Consensus 118 y~~-~s~~~l~~~f~---~va~a~~lPiilY 144 (306)
T 1o5k_A 118 YNK-PTQEGLYQHYK---YISERTDLGIVVY 144 (306)
T ss_dssp SSC-CCHHHHHHHHH---HHHTTCSSCEEEE
T ss_pred CCC-CCHHHHHHHHH---HHHHhCCCCEEEE
Confidence 321 12223333333 3455668999875
No 202
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=56.01 E-value=35 Score=34.62 Aligned_cols=96 Identities=18% Similarity=0.147 Sum_probs=58.3
Q ss_pred HHHHHHhcCCCEEEEc------CCCCHHHHHHHHHH-HHhcCCCceEEEeec---ChhhHhhHHHHHHh-cCEEEEcCCC
Q 008112 281 DIKFGVDNKVDFYAVS------FVKDAQVVHELKNY-LKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGD 349 (577)
Q Consensus 281 dI~~al~~gvD~I~~S------fV~sa~dv~~lr~~-l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDGImIaRGD 349 (577)
.+++-++.|+|+|.+. +--|.++=.++.+. .+..+.+++||+-+= |.++++......+. +|++|+-+-.
T Consensus 50 lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 129 (315)
T 3na8_A 50 SIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPIS 129 (315)
T ss_dssp HHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 3467788999998753 22344444444443 444567789999875 45566655555555 8999997554
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 350 Lg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
+.- ...+.+...-+ ..|.+.+.|+++.
T Consensus 130 y~~-~s~~~l~~~f~---~va~a~~lPiilY 156 (315)
T 3na8_A 130 YWK-LNEAEVFQHYR---AVGEAIGVPVMLY 156 (315)
T ss_dssp SSC-CCHHHHHHHHH---HHHHHCSSCEEEE
T ss_pred CCC-CCHHHHHHHHH---HHHHhCCCcEEEE
Confidence 422 12233433334 4455668999975
No 203
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=55.63 E-value=39 Score=36.80 Aligned_cols=95 Identities=16% Similarity=0.193 Sum_probs=56.5
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEe-ecChhhHhhHHHHHHh-cCEEEEc-CCCccCCCCCCcHHHHHHHHHHHHHH----
Q 008112 300 DAQVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITA-SDGAMVA-RGDLGAELPIEEVPLLQEEIIRTCRS---- 372 (577)
Q Consensus 300 sa~dv~~lr~~l~~~~~~i~IiaK-IEt~~gv~NldeIl~~-sDGImIa-RGDLg~elg~e~v~~~qk~Ii~~c~~---- 372 (577)
+.++++++++.. +++|+.| +-+ .+......+. +|+|.|+ .|--..+.+... ..+..++.++++.
T Consensus 331 ~~~~i~~lr~~~-----~~PvivKgv~~---~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~-~~~l~~v~~~v~~~~~~ 401 (511)
T 1kbi_A 331 TWKDIEELKKKT-----KLPIVIKGVQR---TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAP-IEVLAETMPILEQRNLK 401 (511)
T ss_dssp CHHHHHHHHHHC-----SSCEEEEEECS---HHHHHHHHHTTCSEEEECCTTTTSSTTCCCH-HHHHHHHHHHHHTTTCB
T ss_pred HHHHHHHHHHHh-----CCcEEEEeCCC---HHHHHHHHHcCCCEEEEcCCCCccCCCCCch-HHHHHHHHHHHHhhccC
Confidence 467777777653 5778888 322 3333333334 9999994 221111222222 2334455555542
Q ss_pred cCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 373 MGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 373 aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
..+|||....+- --.|+..++..|+|+||+.
T Consensus 402 ~~ipVia~GGI~------------~g~Dv~kaLalGAdaV~iG 432 (511)
T 1kbi_A 402 DKLEVFVDGGVR------------RGTDVLKALCLGAKGVGLG 432 (511)
T ss_dssp TTBEEEEESSCC------------SHHHHHHHHHHTCSEEEEC
T ss_pred CCcEEEEECCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 268888765433 2468999999999999985
No 204
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=55.61 E-value=39 Score=34.21 Aligned_cols=96 Identities=10% Similarity=0.121 Sum_probs=57.0
Q ss_pred HHHHHHhcCCCEEEEc------CCCCHHHHHHHHH-HHHhcCCCceEEEeec--ChhhHhhHHHHHHh-cCEEEEcCCCc
Q 008112 281 DIKFGVDNKVDFYAVS------FVKDAQVVHELKN-YLKSCGADIHVIVKIE--SADSIPNLHSIITA-SDGAMVARGDL 350 (577)
Q Consensus 281 dI~~al~~gvD~I~~S------fV~sa~dv~~lr~-~l~~~~~~i~IiaKIE--t~~gv~NldeIl~~-sDGImIaRGDL 350 (577)
.+++-++.|+|+|.+. +.-|.++=.++.+ ..+..+.+++||+-+= |.++++.....-+. +|++|+-+-.+
T Consensus 38 lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~Gadavlv~~P~y 117 (314)
T 3d0c_A 38 NVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDSGADCVMIHQPVH 117 (314)
T ss_dssp HHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHTTCSEEEECCCCC
T ss_pred HHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 3467788999998753 3344544444444 4445567899999885 34455444444444 89999975443
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 351 GAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 351 g~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
.- .+.+.+...-+ ..|.+.+.|+++.
T Consensus 118 ~~-~s~~~l~~~f~---~va~a~~lPiilY 143 (314)
T 3d0c_A 118 PY-ITDAGAVEYYR---NIIEALDAPSIIY 143 (314)
T ss_dssp SC-CCHHHHHHHHH---HHHHHSSSCEEEE
T ss_pred CC-CCHHHHHHHHH---HHHHhCCCCEEEE
Confidence 21 12223333333 4455678999885
No 205
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=55.61 E-value=24 Score=35.23 Aligned_cols=146 Identities=19% Similarity=0.194 Sum_probs=85.8
Q ss_pred CCCCccCHHHH-HHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh--------cCE
Q 008112 272 PSITEKDWDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--------SDG 342 (577)
Q Consensus 272 p~ltekD~~dI-~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~--------sDG 342 (577)
|.-|+.|.+.+ ..+.+.|++.|+++ +..+..+++.|+ +.+++|.+=|=.|.|-...+.-+.. +|.
T Consensus 54 p~~t~~~I~~lc~eA~~~~~aaVCV~----p~~V~~a~~~L~--gs~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 127 (260)
T 3r12_A 54 PFATPDDIKKLCLEARENRFHGVCVN----PCYVKLAREELE--GTDVKVVTVVGFPLGANETRTKAHEAIFAVESGADE 127 (260)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHHHHHHHHT--TSCCEEEEEESTTTCCSCHHHHHHHHHHHHHHTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhc--CCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 45577776554 67888999999884 567888888884 5567888877666665444333321 443
Q ss_pred EEEcCCCccCCCCC---CcHHHHHHHHHHHHHHc-CCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhccceEEeccc
Q 008112 343 AMVARGDLGAELPI---EEVPLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSGE 417 (577)
Q Consensus 343 ImIaRGDLg~elg~---e~v~~~qk~Ii~~c~~a-GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~D~imLs~E 417 (577)
|=+ -+.++. .+...+.++|-..+.+. |+|+=+ |||+- .-|..|+..... +...|+|.|=-|.=
T Consensus 128 IDm-----ViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKV---IlEt~----~Lt~eei~~A~~ia~eaGADfVKTSTG 195 (260)
T 3r12_A 128 IDM-----VINVGMLKAKEWEYVYEDIRSVVESVKGKVVKV---IIETC----YLDTEEKIAACVISKLAGAHFVKTSTG 195 (260)
T ss_dssp EEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEE---ECCGG----GCCHHHHHHHHHHHHHTTCSEEECCCS
T ss_pred EEE-----EeehhhhccccHHHHHHHHHHHHHhcCCCcEEE---EEeCC----CCCHHHHHHHHHHHHHhCcCEEEcCCC
Confidence 321 122221 14455555544444333 444322 33332 337788877766 66789999887611
Q ss_pred cCCCCCHHHHHHHHHHHH
Q 008112 418 TAHGKFPLKAVKVMHTVS 435 (577)
Q Consensus 418 Ta~G~yP~eaV~~m~~I~ 435 (577)
=..|.--++.|+.|++.+
T Consensus 196 f~~~GAT~edV~lm~~~v 213 (260)
T 3r12_A 196 FGTGGATAEDVHLMKWIV 213 (260)
T ss_dssp SSSCCCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHh
Confidence 112233568999998875
No 206
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=55.60 E-value=1.5e+02 Score=29.97 Aligned_cols=143 Identities=13% Similarity=0.174 Sum_probs=85.3
Q ss_pred ccCHHHHHHHHhcCCCEEEEc-------CCCCHHHHHHHHHHHHhcCCCceEEEeecChhh------------HhhHHHH
Q 008112 276 EKDWDDIKFGVDNKVDFYAVS-------FVKDAQVVHELKNYLKSCGADIHVIVKIESADS------------IPNLHSI 336 (577)
Q Consensus 276 ekD~~dI~~al~~gvD~I~~S-------fV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~g------------v~NldeI 336 (577)
-.+.+++..|.+.|+|.|=+- -.-|...++.++++. ++.|.++|.-..| .+.++..
T Consensus 46 ~~s~~~a~~A~~gGAdRIELc~~l~~GGlTPS~g~i~~a~~~~-----~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~ 120 (287)
T 3iwp_A 46 VDSVESAVNAERGGADRIELCSGLSEGGTTPSMGVLQVVKQSV-----QIPVFVMIRPRGGDFLYSDREIEVMKADIRLA 120 (287)
T ss_dssp ESSHHHHHHHHHHTCSEEEECBCGGGTCBCCCHHHHHHHHTTC-----CSCEEEECCSSSSCSCCCHHHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHhCCCEEEECCCCCCCCCCCCHHHHHHHHHhc-----CCCeEEEEecCCCCcccCHHHHHHHHHHHHHH
Confidence 356788899999999998653 123667777776643 5899999988877 2455666
Q ss_pred HHh-cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 337 ITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 337 l~~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
.+. +|||.+|- |.-+ +--++... ++++..|. +.++-+ =.-++. .++..+ -+-..+..|+|-|+.|
T Consensus 121 ~~~GAdGvVfG~--L~~d-g~iD~~~~-~~Li~~a~--~l~vTF-HRAFD~-----~~d~~~--Ale~Li~lGvdrILTS 186 (287)
T 3iwp_A 121 KLYGADGLVFGA--LTED-GHIDKELC-MSLMAICR--PLPVTF-HRAFDM-----VHDPMA--ALETLLTLGFERVLTS 186 (287)
T ss_dssp HHTTCSEEEECC--BCTT-SCBCHHHH-HHHHHHHT--TSCEEE-CGGGGG-----CSCHHH--HHHHHHHHTCSEEEEC
T ss_pred HHcCCCEEEEee--eCCC-CCcCHHHH-HHHHHHcC--CCcEEE-ECchhc-----cCCHHH--HHHHHHHcCCCEEECC
Confidence 655 99999983 2111 11123333 44555553 445443 111121 122222 2333444499999998
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHhc
Q 008112 416 GETAHGKFPLKAVKVMHTVSLRTEA 440 (577)
Q Consensus 416 ~ETa~G~yP~eaV~~m~~I~~~aE~ 440 (577)
|--.. ..+-+..+++++..+..
T Consensus 187 G~~~~---a~~Gl~~Lk~Lv~~a~~ 208 (287)
T 3iwp_A 187 GCDSS---ALEGLPLIKRLIEQAKG 208 (287)
T ss_dssp TTSSS---TTTTHHHHHHHHHHHTT
T ss_pred CCCCC---hHHhHHHHHHHHHHhCC
Confidence 75222 24777888888777664
No 207
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=55.59 E-value=7.3 Score=37.34 Aligned_cols=127 Identities=17% Similarity=0.286 Sum_probs=78.3
Q ss_pred ccCHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHH----Hh--cCEEEEcCCC
Q 008112 276 EKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSII----TA--SDGAMVARGD 349 (577)
Q Consensus 276 ekD~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl----~~--sDGImIaRGD 349 (577)
=+|.++++.+++..++++++.+. +-..+.++.+.+++.|+ .++.-++..+|+.+=+.=+ .. .|||+=.+.-
T Consensus 16 vr~~~~l~~al~s~~~~ifll~g-~i~~l~~~v~~lk~~~K--~v~Vh~Dli~Gls~d~~ai~fL~~~~~pdGIIsTk~~ 92 (192)
T 3kts_A 16 AHNQKDMEKILELDLTYMVMLET-HVAQLKALVKYAQAGGK--KVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGN 92 (192)
T ss_dssp ESSSHHHHHHTTSSCCEEEECSE-ETTTHHHHHHHHHHTTC--EEEEEGGGEETCCCSHHHHHHHHHTTCCSEEEESCHH
T ss_pred ecCHHHHHHHHcCCCCEEEEecC-cHHHHHHHHHHHHHcCC--eEEEecCchhccCCcHHHHHHHHhCCCCCEEEeCcHH
Confidence 36889999999999999999886 55677777777777765 4555777777776422211 11 6777654321
Q ss_pred c---cCCCCCC-----------------------------cHHHHHHHHH-HHHHHcCCceEEEehhhHhhhcCCCCChH
Q 008112 350 L---GAELPIE-----------------------------EVPLLQEEII-RTCRSMGKAVIVATNMLESMIVHPTPTRA 396 (577)
Q Consensus 350 L---g~elg~e-----------------------------~v~~~qk~Ii-~~c~~aGKPvi~ATq~LeSM~~~~~PtrA 396 (577)
+ +-++|++ -+|-+.-++| +.++..+.|+|. ..+.+
T Consensus 93 ~i~~Ak~~gL~tIqR~FliDS~al~~~~~~i~~~~PD~iEiLPGi~p~iI~~i~~~~~~PiIa-GGlI~----------- 160 (192)
T 3kts_A 93 AIMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIA-GGLIE----------- 160 (192)
T ss_dssp HHHHHHHTTCEEEEEEECCSHHHHHHHHHHHHHHCCSEEEEECTTCHHHHHHHHHHHCCCEEE-ESSCC-----------
T ss_pred HHHHHHHCCCeEEEEEEEEEcchHHHHHHHHhhcCCCEEEECCchhHHHHHHHHHhcCCCEEE-ECCcC-----------
Confidence 1 1111111 0111112333 335567888775 33332
Q ss_pred hHHHHHHHHHhccceEEeccc
Q 008112 397 EVSDIAIAVREGADAVMLSGE 417 (577)
Q Consensus 397 Ev~Dv~nav~~G~D~imLs~E 417 (577)
.-.|+.+|+..|+|+|.-|..
T Consensus 161 ~~edv~~al~aGA~aVsTs~~ 181 (192)
T 3kts_A 161 TSEQVNQVIASGAIAVTTSNK 181 (192)
T ss_dssp SHHHHHHHHTTTEEEEEECCG
T ss_pred CHHHHHHHHHcCCeEEEeCCH
Confidence 346788999999999998644
No 208
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=54.99 E-value=1.1e+02 Score=31.77 Aligned_cols=124 Identities=10% Similarity=0.021 Sum_probs=65.3
Q ss_pred CCCccCHHHH--------HHHHhcCCCEEEEc-------------CCCCHHH------------HHHHHHHHHh-cCCCc
Q 008112 273 SITEKDWDDI--------KFGVDNKVDFYAVS-------------FVKDAQV------------VHELKNYLKS-CGADI 318 (577)
Q Consensus 273 ~ltekD~~dI--------~~al~~gvD~I~~S-------------fV~sa~d------------v~~lr~~l~~-~~~~i 318 (577)
.||..|++.+ +.+.+.|+|+|=+- ..+...| +.++.+.+.+ .+.+
T Consensus 155 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~- 233 (377)
T 2r14_A 155 ALETDEIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPE- 233 (377)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCC-
Confidence 6788887766 34567899999873 3222211 3333333322 2545
Q ss_pred eEEEeecC---hh------hHhhHHHHHHh-----cCEEEEcCCCccCCCCCCcHHHHHHHHHH-HHHHcCCceEEEehh
Q 008112 319 HVIVKIES---AD------SIPNLHSIITA-----SDGAMVARGDLGAELPIEEVPLLQEEIIR-TCRSMGKAVIVATNM 383 (577)
Q Consensus 319 ~IiaKIEt---~~------gv~NldeIl~~-----sDGImIaRGDLg~elg~e~v~~~qk~Ii~-~c~~aGKPvi~ATq~ 383 (577)
.|..||-. .. ..++.-++++. +|.|-+..|...-..+...+ ..++ ..+..++|+|....
T Consensus 234 ~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~-----~~~~~ik~~~~iPvi~~Gg- 307 (377)
T 2r14_A 234 RVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPE-----GFREQMRQRFKGGLIYCGN- 307 (377)
T ss_dssp GEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------CCCT-----THHHHHHHHCCSEEEEESS-
T ss_pred cEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchH-----HHHHHHHHHCCCCEEEECC-
Confidence 78889832 11 12333333332 78888865532111111111 1222 23345789887532
Q ss_pred hHhhhcCCCCChHhHHHHHHHHHhc-cceEEec
Q 008112 384 LESMIVHPTPTRAEVSDIAIAVREG-ADAVMLS 415 (577)
Q Consensus 384 LeSM~~~~~PtrAEv~Dv~nav~~G-~D~imLs 415 (577)
. + ..++..++..| +|+|++.
T Consensus 308 --------i-~---~~~a~~~l~~g~aD~V~ig 328 (377)
T 2r14_A 308 --------Y-D---AGRAQARLDDNTADAVAFG 328 (377)
T ss_dssp --------C-C---HHHHHHHHHTTSCSEEEES
T ss_pred --------C-C---HHHHHHHHHCCCceEEeec
Confidence 2 3 23466788888 9999985
No 209
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=54.78 E-value=48 Score=29.92 Aligned_cols=61 Identities=16% Similarity=0.157 Sum_probs=43.7
Q ss_pred EEcCCCEEEEEEec--CC---CCceEEeccccccc-cccCCCCEEEEe--CCe-EEEEEEEEeCCeEEEE
Q 008112 189 TLTSGQEFTFTIQR--GV---GSAECVSVNYDDFV-NDVEVGDMLLVD--GGM-MSLLVKSKTEDSVKCE 249 (577)
Q Consensus 189 ~L~~G~~v~lt~~~--~~---~~~~~i~v~~~~~~-~~v~~Gd~I~id--DG~-i~l~V~~v~~~~v~~~ 249 (577)
-.+.|++.+|+... .. +......++-..|- ..+++|+.+.+. ||. +..+|++++++.|+.-
T Consensus 56 gm~~Ge~~~v~ipp~~aYG~~~~~~v~~v~~~~f~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~vD 125 (151)
T 2kr7_A 56 KAQIGEWEEVVIAPEEAYGVYESSYLQEVPRDQFEGIELEKGMSVFGQTEDNQTIQAIIKDFSATHVMVD 125 (151)
T ss_dssp TCCBTCEEEEEECGGGTTCSSCSCEEEEEEGGGGTTSCCCTTCEEEEEETTTEEEEEEEEEECSSEEEEE
T ss_pred CCCCCCEEEEEEecHHHcCCCCcceEEEEcHHHcCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEEEE
Confidence 36899999998862 22 33345556666662 268999999987 575 7788999999887653
No 210
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=54.75 E-value=53 Score=33.33 Aligned_cols=97 Identities=9% Similarity=0.132 Sum_probs=56.9
Q ss_pred HHHHHHhcCCCEEEEc------CCCCHHHHHHHH-HHHHhcCCCceEEEeec---ChhhHhhHHHHHHh-cCEEEEcCCC
Q 008112 281 DIKFGVDNKVDFYAVS------FVKDAQVVHELK-NYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGD 349 (577)
Q Consensus 281 dI~~al~~gvD~I~~S------fV~sa~dv~~lr-~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDGImIaRGD 349 (577)
.+++-++.|+|+|.+. +--|.++=.++. ...+..+.+++||+-+= |.++++......+. +|++|+-+-.
T Consensus 37 lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 116 (318)
T 3qfe_A 37 YYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPA 116 (318)
T ss_dssp HHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 4567788999998763 223344444443 34455577899999763 45555555555544 9999997543
Q ss_pred -ccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 350 -LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 350 -Lg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
+.-....+.+...-+. .|.+.+.|+++.
T Consensus 117 y~~kp~~~~~l~~~f~~---ia~a~~lPiilY 145 (318)
T 3qfe_A 117 YFGKATTPPVIKSFFDD---VSCQSPLPVVIY 145 (318)
T ss_dssp C---CCCHHHHHHHHHH---HHHHCSSCEEEE
T ss_pred ccCCCCCHHHHHHHHHH---HHhhCCCCEEEE
Confidence 2211222334333344 445668999975
No 211
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=54.44 E-value=16 Score=39.67 Aligned_cols=52 Identities=15% Similarity=0.252 Sum_probs=43.0
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHH
Q 008112 107 RRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKE 158 (577)
Q Consensus 107 ~r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~ 158 (577)
+.+..+-+.+|....+.+.++.|+++|+++.=+|.+|+..+.+.++++.+|+
T Consensus 242 ~~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~ 293 (511)
T 3usb_A 242 QGRLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRA 293 (511)
T ss_dssp TSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred ccceeeeeeeeeccchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHH
Confidence 3456677888888888999999999999999999999988777766666664
No 212
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=54.43 E-value=46 Score=30.47 Aligned_cols=59 Identities=19% Similarity=0.265 Sum_probs=42.5
Q ss_pred EcCCCEEEEEEec--CC---CCceEEecccccccc--ccCCCCEEEEe--CCe-EEEEEEEEeCCeEEE
Q 008112 190 LTSGQEFTFTIQR--GV---GSAECVSVNYDDFVN--DVEVGDMLLVD--GGM-MSLLVKSKTEDSVKC 248 (577)
Q Consensus 190 L~~G~~v~lt~~~--~~---~~~~~i~v~~~~~~~--~v~~Gd~I~id--DG~-i~l~V~~v~~~~v~~ 248 (577)
.+.|++.+|+... .. +......++-+.|.. .+++|+.+.+. +|. +..+|.+++++.+..
T Consensus 47 m~~Ge~~~v~ipp~~aYG~~~~~lv~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~v 115 (158)
T 3cgm_A 47 REEGEAFQAHVPAEKAYGPHDPEGVQVVPLSAFPEDAEVVPGAQFYAQDMEGNPMPLTVVAVEGEEVTV 115 (158)
T ss_dssp CBTTCEEEEEECGGGTTCCCCGGGEEEEEGGGSCTTSCCCTTCEEEEEETTTEEEEEEEEEEETTEEEE
T ss_pred CCCCCEEEEEECcHHHcCCCCcceEEEEEHHHCCCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEEE
Confidence 6899999998862 22 233445566666654 68999999997 564 478899999887754
No 213
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=54.15 E-value=61 Score=33.62 Aligned_cols=116 Identities=16% Similarity=0.121 Sum_probs=65.6
Q ss_pred hcCCCEEEEcCC-----------CCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHH------hcCEEEEc---
Q 008112 287 DNKVDFYAVSFV-----------KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT------ASDGAMVA--- 346 (577)
Q Consensus 287 ~~gvD~I~~SfV-----------~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~------~sDGImIa--- 346 (577)
+.|+|+|-+.+= ++++.+.++.+.+.+. .+++|++||=----.+++.++++ -+|+|.+-
T Consensus 153 ~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~-~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~ 231 (354)
T 4ef8_A 153 TEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEV-YPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSI 231 (354)
T ss_dssp HHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHH-CCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCE
T ss_pred hcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHh-hCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEeccc
Confidence 357899876542 4667777776666554 35889999854333444555554 26777641
Q ss_pred -CC---Ccc---------CCCC-C--CcH-HHHHHHHHHHHHHc-CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhc
Q 008112 347 -RG---DLG---------AELP-I--EEV-PLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREG 408 (577)
Q Consensus 347 -RG---DLg---------~elg-~--e~v-~~~qk~Ii~~c~~a-GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G 408 (577)
+| |+- ...+ + ..+ +...+.+-+..++. ..|+|....+. | ..|+..++..|
T Consensus 232 ~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~~GGI~---------s---~~da~~~l~aG 299 (354)
T 4ef8_A 232 GNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGCGGVY---------T---GEDAFLHVLAG 299 (354)
T ss_dssp EEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEESCCC---------S---HHHHHHHHHHT
T ss_pred CcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCEEEECCcC---------C---HHHHHHHHHcC
Confidence 11 100 0000 0 112 33444444444443 47887654432 2 35788888999
Q ss_pred cceEEec
Q 008112 409 ADAVMLS 415 (577)
Q Consensus 409 ~D~imLs 415 (577)
+|+||+.
T Consensus 300 Ad~V~vg 306 (354)
T 4ef8_A 300 ASMVQVG 306 (354)
T ss_dssp EEEEEEC
T ss_pred CCEEEEh
Confidence 9999985
No 214
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=54.00 E-value=80 Score=32.36 Aligned_cols=117 Identities=14% Similarity=0.191 Sum_probs=63.5
Q ss_pred HHHHHHHhcCCCEEEEcC----------------CCCHHHHHHHHHHHHhcCCCceEEEeecC----hhhHhhHHHHH--
Q 008112 280 DDIKFGVDNKVDFYAVSF----------------VKDAQVVHELKNYLKSCGADIHVIVKIES----ADSIPNLHSII-- 337 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~Sf----------------V~sa~dv~~lr~~l~~~~~~i~IiaKIEt----~~gv~NldeIl-- 337 (577)
+..+.+.+.|+|+|-+.+ .++++.+.++.+.+.+.- +++|..||-. ....++..+++
T Consensus 74 ~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v-~~PV~vKiR~g~~~~~~~~~~~~~a~~ 152 (350)
T 3b0p_A 74 EAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV-RVPVTVKMRLGLEGKETYRGLAQSVEA 152 (350)
T ss_dssp HHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC-SSCEEEEEESCBTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh-CCceEEEEecCcCccccHHHHHHHHHH
Confidence 334566678999987764 345666666666665432 5788888741 11112333333
Q ss_pred --Hh-cCEEEEcCCCc--cCC------CCCCcHHHHHHHHHHHHH-Hc-CCceEEEehhhHhhhcCCCCChHhHHHHHHH
Q 008112 338 --TA-SDGAMVARGDL--GAE------LPIEEVPLLQEEIIRTCR-SM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIA 404 (577)
Q Consensus 338 --~~-sDGImIaRGDL--g~e------lg~e~v~~~qk~Ii~~c~-~a-GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~na 404 (577)
+. +|+|.|--+.- +.. .+...+ ..+...+ .. +.|||....+ -|.. |+..+
T Consensus 153 l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~-----~~i~~ik~~~~~iPVianGgI---------~s~e---da~~~ 215 (350)
T 3b0p_A 153 MAEAGVKVFVVHARSALLALSTKANREIPPLRH-----DWVHRLKGDFPQLTFVTNGGI---------RSLE---EALFH 215 (350)
T ss_dssp HHHTTCCEEEEECSCBC----------CCCCCH-----HHHHHHHHHCTTSEEEEESSC---------CSHH---HHHHH
T ss_pred HHHcCCCEEEEecCchhcccCcccccCCCcccH-----HHHHHHHHhCCCCeEEEECCc---------CCHH---HHHHH
Confidence 23 88888864321 111 111122 2233333 34 7899875443 3443 34455
Q ss_pred HHhccceEEec
Q 008112 405 VREGADAVMLS 415 (577)
Q Consensus 405 v~~G~D~imLs 415 (577)
+. |+|+||+.
T Consensus 216 l~-GaD~V~iG 225 (350)
T 3b0p_A 216 LK-RVDGVMLG 225 (350)
T ss_dssp HT-TSSEEEEC
T ss_pred Hh-CCCEEEEC
Confidence 55 99999985
No 215
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=53.66 E-value=60 Score=32.13 Aligned_cols=117 Identities=13% Similarity=0.160 Sum_probs=73.5
Q ss_pred HHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEE--EEcCCCccCCCCCC
Q 008112 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGA--MVARGDLGAELPIE 357 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGI--mIaRGDLg~elg~e 357 (577)
+-++.+.+.|+|++++|-. -.++..++++.+.+.|-+. |..+=-....+.+..|.+.++|. ++.+- | -.|..
T Consensus 107 ~F~~~~~~aGvdG~IipDL-P~eE~~~~~~~~~~~Gl~~--I~lvaP~t~~eRi~~ia~~a~gFiY~Vs~~--G-vTG~~ 180 (252)
T 3tha_A 107 KFVKKAKSLGICALIVPEL-SFEESDDLIKECERYNIAL--ITLVSVTTPKERVKKLVKHAKGFIYLLASI--G-ITGTK 180 (252)
T ss_dssp HHHHHHHHTTEEEEECTTC-CGGGCHHHHHHHHHTTCEE--CEEEETTSCHHHHHHHHTTCCSCEEEECCS--C-SSSCS
T ss_pred HHHHHHHHcCCCEEEeCCC-CHHHHHHHHHHHHHcCCeE--EEEeCCCCcHHHHHHHHHhCCCeEEEEecC--C-CCCcc
Confidence 4556778899999999987 4567888888888766542 33332222357899999988766 33320 1 12222
Q ss_pred -cHHHHHHHHHHHHHHc-CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 358 -EVPLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 358 -~v~~~qk~Ii~~c~~a-GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
.+..-.+..++..+++ ..|+++... .-+++.+. .+..++|++...
T Consensus 181 ~~~~~~~~~~v~~vr~~~~~Pv~vGfG---------Ist~e~a~----~~~~~ADGVIVG 227 (252)
T 3tha_A 181 SVEEAILQDKVKEIRSFTNLPIFVGFG---------IQNNQDVK----RMRKVADGVIVG 227 (252)
T ss_dssp HHHHHHHHHHHHHHHTTCCSCEEEESS---------CCSHHHHH----HHTTTSSEEEEC
T ss_pred cCCCHHHHHHHHHHHHhcCCcEEEEcC---------cCCHHHHH----HHHhcCCEEEEC
Confidence 3444456777777765 679988554 33444433 334579999874
No 216
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=53.65 E-value=28 Score=35.47 Aligned_cols=58 Identities=28% Similarity=0.359 Sum_probs=35.9
Q ss_pred CCCHHHHHHHHHhCCcEEEEeccCCChH-------HHHHHHHHHHHHHHhcCCCeeEEEeecCCC
Q 008112 120 TNTREMIWKLAEAGMNVARLNMSHGDHA-------SHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (577)
Q Consensus 120 ~~~~e~l~~li~~Gm~v~RiN~sHg~~e-------~~~~~i~~ir~~~~~~~~~~i~I~~Dl~Gp 177 (577)
..+.+.|+.|.+.|+|++||-++..... .-...++.++++.+.+..+-+.+++|+-.-
T Consensus 42 ~~t~~di~~i~~~G~n~vRipi~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vildlH~~ 106 (345)
T 3ndz_A 42 MTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHHE 106 (345)
T ss_dssp CCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCSC
T ss_pred CCcHHHHHHHHHCCCCEEEEeeehHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecCCc
Confidence 3478999999999999999998753210 011223333333222222447899998765
No 217
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=53.60 E-value=22 Score=37.03 Aligned_cols=63 Identities=10% Similarity=0.122 Sum_probs=42.8
Q ss_pred CHHHHHHHHhcCCCEEEEcC---------CCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh----cCEEE
Q 008112 278 DWDDIKFGVDNKVDFYAVSF---------VKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA----SDGAM 344 (577)
Q Consensus 278 D~~dI~~al~~gvD~I~~Sf---------V~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~----sDGIm 344 (577)
..++.+.+.+.|+|+|.+|. .-+.+-+.++++.+ +.++.||+- -||.+-.++++. +|++|
T Consensus 239 ~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v---~~~ipVia~----GGI~~g~D~~kalalGAd~V~ 311 (368)
T 2nli_A 239 HPEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERV---NKRVPIVFD----SGVRRGEHVAKALASGADVVA 311 (368)
T ss_dssp SHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHH---TTSSCEEEC----SSCCSHHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHh---CCCCeEEEE----CCCCCHHHHHHHHHcCCCEEE
Confidence 35778889999999999964 22334455555544 446788873 355555555554 99999
Q ss_pred EcC
Q 008112 345 VAR 347 (577)
Q Consensus 345 IaR 347 (577)
|||
T Consensus 312 iGr 314 (368)
T 2nli_A 312 LGR 314 (368)
T ss_dssp ECH
T ss_pred ECH
Confidence 998
No 218
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=53.44 E-value=33 Score=32.35 Aligned_cols=84 Identities=14% Similarity=0.076 Sum_probs=50.4
Q ss_pred HHHHHHHHhcCCCEEEEcCCC--------CHHHHHHHHHHHHhcCCCceEEE--eecChhhHhhHHHHHHh-cCEEEEcC
Q 008112 279 WDDIKFGVDNKVDFYAVSFVK--------DAQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITA-SDGAMVAR 347 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~--------sa~dv~~lr~~l~~~~~~i~Iia--KIEt~~gv~NldeIl~~-sDGImIaR 347 (577)
.+.++.+.+.|+|+|.+..+. +.+.++++++. . ++++++ -|.+ .+|+.+.++. +||+++|+
T Consensus 157 ~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~---~--~~pvia~GGi~~---~~~~~~~~~~Ga~~v~vgs 228 (253)
T 1h5y_A 157 VKWAKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADS---V--RIPVIASGGAGR---VEHFYEAAAAGADAVLAAS 228 (253)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHH---C--SSCEEEESCCCS---HHHHHHHHHTTCSEEEESH
T ss_pred HHHHHHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHh---c--CCCEEEeCCCCC---HHHHHHHHHcCCcHHHHHH
Confidence 355677788999999875443 23445444443 2 456665 3433 2566666665 99999997
Q ss_pred CCccCCCCCCcHHHHHHHHHHHHHHcCCce
Q 008112 348 GDLGAELPIEEVPLLQEEIIRTCRSMGKAV 377 (577)
Q Consensus 348 GDLg~elg~e~v~~~qk~Ii~~c~~aGKPv 377 (577)
+=+....+ .+++.+..+++|.++
T Consensus 229 al~~~~~~-------~~~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 229 LFHFRVLS-------IAQVKRYLKERGVEV 251 (253)
T ss_dssp HHHTTSSC-------HHHHHHHHHHTTCBC
T ss_pred HHHcCCCC-------HHHHHHHHHHcCCCC
Confidence 54433322 234455566777664
No 219
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=52.92 E-value=45 Score=34.44 Aligned_cols=129 Identities=13% Similarity=0.137 Sum_probs=68.8
Q ss_pred CCCccCHHHH--------HHHHhcCCCEEEEcCC-------------CC------------HHHHHHHHHHHHh-cCCCc
Q 008112 273 SITEKDWDDI--------KFGVDNKVDFYAVSFV-------------KD------------AQVVHELKNYLKS-CGADI 318 (577)
Q Consensus 273 ~ltekD~~dI--------~~al~~gvD~I~~SfV-------------~s------------a~dv~~lr~~l~~-~~~~i 318 (577)
.||..|++.+ +.+.+.|+|+|=+-.- +. ..-+.++.+.+.+ .+.+.
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~ 226 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENL 226 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCc
Confidence 6788888776 4567889999876432 21 1123334344433 36677
Q ss_pred eEEEeecC---h----hhHhhHHHHHHh-----cCEEEEcCCCccCC--CCCCcHHHHHHHHHHHH-HHcCCceEEEehh
Q 008112 319 HVIVKIES---A----DSIPNLHSIITA-----SDGAMVARGDLGAE--LPIEEVPLLQEEIIRTC-RSMGKAVIVATNM 383 (577)
Q Consensus 319 ~IiaKIEt---~----~gv~NldeIl~~-----sDGImIaRGDLg~e--lg~e~v~~~qk~Ii~~c-~~aGKPvi~ATq~ 383 (577)
.|..||-- . ..+++.-++++. +|.|-+.-|...-. .+... ..+...++.. +..++|++....+
T Consensus 227 pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~--~~~~~~~~~ir~~~~iPVi~~GgI 304 (363)
T 3l5l_A 227 PLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGP--AFMGPIAERVRREAKLPVTSAWGF 304 (363)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCT--TTTHHHHHHHHHHHTCCEEECSST
T ss_pred eEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCc--chhHHHHHHHHHHcCCcEEEeCCC
Confidence 88888832 1 113333333332 78888775543221 11111 0111222222 2347998865432
Q ss_pred hHhhhcCCCCChHhHHHHHHHHHhc-cceEEec
Q 008112 384 LESMIVHPTPTRAEVSDIAIAVREG-ADAVMLS 415 (577)
Q Consensus 384 LeSM~~~~~PtrAEv~Dv~nav~~G-~D~imLs 415 (577)
- +. .++..++..| +|+|++.
T Consensus 305 ~---------s~---e~a~~~l~~G~aD~V~iG 325 (363)
T 3l5l_A 305 G---------TP---QLAEAALQANQLDLVSVG 325 (363)
T ss_dssp T---------SH---HHHHHHHHTTSCSEEECC
T ss_pred C---------CH---HHHHHHHHCCCccEEEec
Confidence 1 22 3455778888 9999985
No 220
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=52.77 E-value=16 Score=39.53 Aligned_cols=49 Identities=18% Similarity=0.311 Sum_probs=40.4
Q ss_pred cEEEEecCCCCCCHHHHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHH
Q 008112 110 TKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKE 158 (577)
Q Consensus 110 tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~ 158 (577)
..+.+.+|......+.++.++++|+++.=||++||..+.+.++++.+|+
T Consensus 244 l~vga~vG~~~~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~ 292 (514)
T 1jcn_A 244 LLCGAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQ 292 (514)
T ss_dssp BCCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHH
T ss_pred eeeeeEecCchhhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHH
Confidence 4456677877677899999999999999999999998776777777775
No 221
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=52.67 E-value=46 Score=30.95 Aligned_cols=61 Identities=21% Similarity=0.449 Sum_probs=44.4
Q ss_pred EEcCCCEEEEEEec--CCC---CceEEecccccccc--ccCCCCEEEEe--CC-eEEEEEEEEeCCeEEEE
Q 008112 189 TLTSGQEFTFTIQR--GVG---SAECVSVNYDDFVN--DVEVGDMLLVD--GG-MMSLLVKSKTEDSVKCE 249 (577)
Q Consensus 189 ~L~~G~~v~lt~~~--~~~---~~~~i~v~~~~~~~--~v~~Gd~I~id--DG-~i~l~V~~v~~~~v~~~ 249 (577)
..+.|++.+|+... ..| .+....++-..|.. .+++|+.+.+. || .+..+|++++++.|+.-
T Consensus 74 gm~~Ge~~~v~Ipp~~AYG~~~~~lv~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~V~vD 144 (169)
T 4dt4_A 74 GLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITVD 144 (169)
T ss_dssp TCCTTCEEEEEECGGGTTCCCCGGGEEEEEGGGGTTTCCCCTTCEEEEECTTSCEEEEEEEEEETTEEEEE
T ss_pred CCCCCCEEEEEEChHHhcCCCChHHEEEeCHHHCCCcCCCCCCcEEEEECCCCCEEEEEEEEEcCCEEEEe
Confidence 36899999999863 222 33455666667764 47999999996 45 47899999999987653
No 222
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=52.12 E-value=27 Score=33.26 Aligned_cols=64 Identities=13% Similarity=0.166 Sum_probs=39.7
Q ss_pred HHHHHHhcCCCEEEEc-----CCCCHHHHHHHHHHHHhcCCCceEEEe--ecChhhHhhHHHHHHh-cCEEEEcCCCc
Q 008112 281 DIKFGVDNKVDFYAVS-----FVKDAQVVHELKNYLKSCGADIHVIVK--IESADSIPNLHSIITA-SDGAMVARGDL 350 (577)
Q Consensus 281 dI~~al~~gvD~I~~S-----fV~sa~dv~~lr~~l~~~~~~i~IiaK--IEt~~gv~NldeIl~~-sDGImIaRGDL 350 (577)
..+...+.|+|+|-+. |...... ..+++..+. .++++++. |.+++ .+++.++. +|+|++++..|
T Consensus 36 ~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~--~~ipv~v~ggi~~~~---~~~~~l~~Gad~V~lg~~~l 107 (244)
T 2y88_A 36 AALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGK--LDVQVELSGGIRDDE---SLAAALATGCARVNVGTAAL 107 (244)
T ss_dssp HHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHH--CSSEEEEESSCCSHH---HHHHHHHTTCSEEEECHHHH
T ss_pred HHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHh--cCCcEEEECCCCCHH---HHHHHHHcCCCEEEECchHh
Confidence 3455678899999883 5555533 333333332 25667664 66554 46666666 99999987665
No 223
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=52.03 E-value=49 Score=42.18 Aligned_cols=120 Identities=13% Similarity=0.068 Sum_probs=75.2
Q ss_pred HHHHHHHHhcCCCE--EEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecCh-hhHhhHHHHHHh-cCEEE---EcCCCcc
Q 008112 279 WDDIKFGVDNKVDF--YAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESA-DSIPNLHSIITA-SDGAM---VARGDLG 351 (577)
Q Consensus 279 ~~dI~~al~~gvD~--I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~-~gv~NldeIl~~-sDGIm---IaRGDLg 351 (577)
.+.++.+++.|++. |.+++=.- ..+++.++++.. .+.++..+-+. ++.+....+.+. +|+|+ +--+|=|
T Consensus 656 ~~~~~~~~~~gv~i~gv~~~~G~p--~~e~~~~~l~~~--gi~~i~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaG 731 (2060)
T 2uva_G 656 IPLLGRLRADGVPIEGLTIGAGVP--SIEVANEYIQTL--GIRHISFKPGSVDAIQQVINIAKANPTFPIILQWTGGRGG 731 (2060)
T ss_dssp HHHHHHHHTTTCCEEEEEEESSCC--CHHHHHHHHHHS--CCSEEEECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTSS
T ss_pred HHHHHHHHHcCCCcceEeecCCCC--CHHHHHHHHHHc--CCeEEEecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccCC
Confidence 46778889999998 77776431 223344566655 45566655443 233333444555 89888 6555666
Q ss_pred CCCCCCcHHHHHHHHHHHHHH-cCCceEEEehhhHhhhcCCCCChHhHHHHHHHH-----------HhccceEEe
Q 008112 352 AELPIEEVPLLQEEIIRTCRS-MGKAVIVATNMLESMIVHPTPTRAEVSDIAIAV-----------REGADAVML 414 (577)
Q Consensus 352 ~elg~e~v~~~qk~Ii~~c~~-aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav-----------~~G~D~imL 414 (577)
-+.+.+++..-.-.++...++ .++|+|.|-.+- .-.|++.++ ..|+|+|++
T Consensus 732 GH~g~~d~~~~~l~lv~~i~~~~~ipviaaGGI~------------~g~~i~aaltg~ws~~~g~palGAdgV~~ 794 (2060)
T 2uva_G 732 GHHSFEDFHQPILLMYSRIRKCSNIVLVAGSGFG------------GSEDTYPYLTGSWSTKFGYPPMPFDGCMF 794 (2060)
T ss_dssp SSCCSCCSHHHHHHHHHHHHTSTTEEEEEESSCC------------SHHHHHHHHHTCGGGTTTSCCCCCSCEEE
T ss_pred CCCCcccccchHHHHHHHHHHHcCCCEEEeCCCC------------CHHHHHHHhcCcchhhcCCCCCCCCEEEE
Confidence 666654432223344444444 478999887654 346789999 999999997
No 224
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=51.44 E-value=26 Score=34.31 Aligned_cols=53 Identities=21% Similarity=0.295 Sum_probs=34.6
Q ss_pred CCHHHHHHHH-HhCCcEEEEeccCC---------ChHHHHHHHHHHHHHHHhcCCCeeEEEeecCC
Q 008112 121 NTREMIWKLA-EAGMNVARLNMSHG---------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (577)
Q Consensus 121 ~~~e~l~~li-~~Gm~v~RiN~sHg---------~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~G 176 (577)
.+.+.++.|. +.|+|++|+-+... +++...+.++.+=+...+.| +.+++|+.+
T Consensus 39 ~~~~di~~~~~~~G~N~vRi~~~~~~~~~~~~~~~p~~~~~~ld~~v~~a~~~G---i~vild~h~ 101 (293)
T 1tvn_A 39 YTAETVAKAKTEFNATLIRAAIGHGTSTGGSLNFDWEGNMSRLDTVVNAAIAED---MYVIIDFHS 101 (293)
T ss_dssp CSHHHHHHHHHHHCCSEEEEEEECCTTSTTSTTTCHHHHHHHHHHHHHHHHHTT---CEEEEEEEC
T ss_pred CCHHHHHHHHHhcCCCEEEEeccccCCCCCccccChHHHHHHHHHHHHHHHHCC---CEEEEEcCC
Confidence 4678999998 49999999988762 22333344444333444555 667788754
No 225
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=51.37 E-value=1.2e+02 Score=29.95 Aligned_cols=119 Identities=13% Similarity=0.080 Sum_probs=72.6
Q ss_pred HHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhccccC
Q 008112 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (577)
Q Consensus 365 ~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~~ 444 (577)
-+...|+..|.++.+-.. .......+...-..|++.+...++. . ..++.+...+++.+ +..++.
T Consensus 76 a~A~~a~~~G~~~~i~~p-----------~~~~~~k~~~~~~~Ga~V~~~~~~~---~-~~~~~~~a~~l~~~-~~~~~~ 139 (304)
T 1ve1_A 76 GLAMIAASRGYRLILTMP-----------AQMSEERKRVLKAFGAELVLTDPER---R-MLAAREEALRLKEE-LGAFMP 139 (304)
T ss_dssp HHHHHHHHHTCEEEEEEE-----------TTCCHHHHHHHHHTTCEEEEECTTT---H-HHHHHHHHHHHHHH-HTCBCC
T ss_pred HHHHHHHHcCCcEEEEeC-----------CCCCHHHHHHHHHcCCEEEEECCCC---C-HHHHHHHHHHHHhc-CCCEeC
Confidence 466778899999876421 1112234555667899988765431 1 34677776666655 322221
Q ss_pred CCCCCCCCcccCCChhH--H-HHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHh----hCCCCeEEEEcCcHH
Q 008112 445 GAMPPNLGQAFKNHMSE--M-FAYHATMMSNTLG--T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTNEKR 508 (577)
Q Consensus 445 ~~~~~~l~~~~~~~~~~--~-ia~~a~~~a~~~~--a-aIiV~T~sG~tA~~is~----~RP~~PIIAvT~~~~ 508 (577)
.+ +. ++.. . ...-+.++.++++ . .||+.+-+|.++.-+++ ..|...||++.+...
T Consensus 140 ~~-~~--------n~~~~~g~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~ 204 (304)
T 1ve1_A 140 DQ-FK--------NPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEPARS 204 (304)
T ss_dssp CT-TT--------CHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEEEEGGG
T ss_pred CC-CC--------ChhHHHHHHHHHHHHHHHHcCCCCCEEEEecCCchhHHHHHHHHHHhCCCCEEEEEecCCC
Confidence 11 11 1211 1 1223467777775 4 89999999998776665 469999999998654
No 226
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=51.06 E-value=93 Score=31.31 Aligned_cols=124 Identities=14% Similarity=0.040 Sum_probs=73.2
Q ss_pred HHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhccc
Q 008112 363 QEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATI 442 (577)
Q Consensus 363 qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~ 442 (577)
=.-+...|+..|.++++-. |..+....+...-..|++.+...++ +. .-++++...+++.+-...+
T Consensus 85 g~alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~---~~-~~~~~~~a~~l~~~~~~~~ 149 (325)
T 3dwg_A 85 GISLAMAARLKGYRLICVM-----------PENTSVERRQLLELYGAQIIFSAAE---GG-SNTAVATAKELAATNPSWV 149 (325)
T ss_dssp HHHHHHHHHHHTCEEEEEE-----------ESSSCHHHHHHHHHHTCEEEEECST---TT-HHHHHHHHHHHHHHCTTSB
T ss_pred HHHHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECCC---CC-HHHHHHHHHHHHHhCCCeE
Confidence 3456778899999987642 2222223355566789998877532 12 3467776666654433222
Q ss_pred cCCCCCCCCCcccCCChhHHHHHHHHHHHhhcC-c-eEEEEcCChHHHHHHHh----hCCCCeEEEEcCcH
Q 008112 443 TGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLG-T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTNEK 507 (577)
Q Consensus 443 ~~~~~~~~l~~~~~~~~~~~ia~~a~~~a~~~~-a-aIiV~T~sG~tA~~is~----~RP~~PIIAvT~~~ 507 (577)
+..+ |.+ +. .+......-+.++.++++ . .||+.+-+|.|.--+++ ..|.+.|+++.+..
T Consensus 150 ~~~~-~~n---p~--~~~~g~~t~~~Ei~~q~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~ 214 (325)
T 3dwg_A 150 MLYQ-YGN---PA--NTDSHYCGTGPELLADLPEITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRY 214 (325)
T ss_dssp CCCT-TTC---HH--HHHHHHHTHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHSTTCEEEEEEEEC
T ss_pred eCCC-CCC---HH--HHHHHHHHHHHHHHHhcCCCCEEEEecCchHHHHHHHHHHHHhCCCCEEEEEeeCC
Confidence 2111 111 00 011122334557777765 4 89999999988766655 48999999998754
No 227
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=50.89 E-value=96 Score=30.50 Aligned_cols=136 Identities=18% Similarity=0.139 Sum_probs=80.0
Q ss_pred HHHHHhcCCCEE-----EEcCCCCHHHHHHHHHHHHhcCCCceEEEeecCh-hh----------HhhHHHHHHh--cCEE
Q 008112 282 IKFGVDNKVDFY-----AVSFVKDAQVVHELKNYLKSCGADIHVIVKIESA-DS----------IPNLHSIITA--SDGA 343 (577)
Q Consensus 282 I~~al~~gvD~I-----~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~-~g----------v~NldeIl~~--sDGI 343 (577)
++.+...|+|.| .+..+.+.+++.++-..+.+.-.+.++|.-+=|. || ++-+..++.. +|.|
T Consensus 38 a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~~~~~~~~~ll~~~~~~~~~d~i 117 (258)
T 4h3d_A 38 AKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLISRDYYTTLNKEISNTGLVDLI 117 (258)
T ss_dssp HHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCCCCHHHHHHHHHHHHHTTCCSEE
T ss_pred HHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCCCCHHHHHHHHHHHHhcCCchhh
Confidence 345667788886 2344455566665555555444567777766543 11 1112223222 4444
Q ss_pred EEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHH-HHHHhccceEEeccccCCCC
Q 008112 344 MVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIA-IAVREGADAVMLSGETAHGK 422 (577)
Q Consensus 344 mIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~-nav~~G~D~imLs~ETa~G~ 422 (577)
=| |+. .-....++++..+++.|..+|.+-+-++ .+|+..|+...+ .+...|+|.+=+.. .-+
T Consensus 118 Dv-------El~--~~~~~~~~l~~~a~~~~~kiI~S~Hdf~-----~TP~~~el~~~~~~~~~~gaDIvKia~---~~~ 180 (258)
T 4h3d_A 118 DV-------ELF--MGDEVIDEVVNFAHKKEVKVIISNHDFN-----KTPKKEEIVSRLCRMQELGADLPKIAV---MPQ 180 (258)
T ss_dssp EE-------EGG--GCHHHHHHHHHHHHHTTCEEEEEEEESS-----CCCCHHHHHHHHHHHHHTTCSEEEEEE---CCS
T ss_pred HH-------hhh--ccHHHHHHHHHHHHhCCCEEEEEEecCC-----CCCCHHHHHHHHHHHHHhCCCEEEEEE---ccC
Confidence 33 222 2235677899999999999999887664 478888876544 46777889876631 223
Q ss_pred CHHHHHHHHHHH
Q 008112 423 FPLKAVKVMHTV 434 (577)
Q Consensus 423 yP~eaV~~m~~I 434 (577)
-+.++.+.+.-.
T Consensus 181 ~~~D~l~Ll~~~ 192 (258)
T 4h3d_A 181 NEKDVLVLLEAT 192 (258)
T ss_dssp SHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 355666555443
No 228
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=50.69 E-value=1.2e+02 Score=28.80 Aligned_cols=123 Identities=11% Similarity=0.010 Sum_probs=67.6
Q ss_pred ccCH-HHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEE-eec---------------ChhhHhhHHHHHH
Q 008112 276 EKDW-DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIV-KIE---------------SADSIPNLHSIIT 338 (577)
Q Consensus 276 ekD~-~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~Iia-KIE---------------t~~gv~NldeIl~ 338 (577)
+.+. +.++.+.+.|+|+|=+.+- ...++.++++.+.+.|-.+..+. -.- ..++++.+...++
T Consensus 22 ~~~~~~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~ 100 (269)
T 3ngf_A 22 EVPFLERFRLAAEAGFGGVEFLFP-YDFDADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDIALH 100 (269)
T ss_dssp TSCHHHHHHHHHHTTCSEEECSCC-TTSCHHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCCEEEecCC-ccCCHHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCccHHHHHHHHHHHHHH
Confidence 3444 4567888999999987653 34578899999988765543322 100 0124445555444
Q ss_pred h-----cCEEEEcCCCccCCCC----CCcHHHHHHHHHHHHHHcCCceEEEehhhHhhh-----cCCCCChHhHHHHHHH
Q 008112 339 A-----SDGAMVARGDLGAELP----IEEVPLLQEEIIRTCRSMGKAVIVATNMLESMI-----VHPTPTRAEVSDIAIA 404 (577)
Q Consensus 339 ~-----sDGImIaRGDLg~elg----~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~-----~~~~PtrAEv~Dv~na 404 (577)
. ++.|.+..| ..-..+ ++.+...-+++...|.+.|..+.+ |.|- .+...|..++.++...
T Consensus 101 ~A~~lGa~~v~~~~g-~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l-----E~~n~~~~~~~~~~~~~~~~~l~~~ 174 (269)
T 3ngf_A 101 YALALDCRTLHAMSG-ITEGLDRKACEETFIENFRYAADKLAPHGITVLV-----EPLNTRNMPGYFIVHQLEAVGLVKR 174 (269)
T ss_dssp HHHHTTCCEEECCBC-BCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEE-----CCCCTTTSTTBSCCCHHHHHHHHHH
T ss_pred HHHHcCCCEEEEccC-CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEE-----eeCCcccCccchhcCHHHHHHHHHH
Confidence 3 566776666 222221 123444445666667777766553 3211 1234455566555555
Q ss_pred H
Q 008112 405 V 405 (577)
Q Consensus 405 v 405 (577)
+
T Consensus 175 v 175 (269)
T 3ngf_A 175 V 175 (269)
T ss_dssp H
T ss_pred h
Confidence 4
No 229
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=50.56 E-value=1.6e+02 Score=29.81 Aligned_cols=119 Identities=16% Similarity=0.099 Sum_probs=72.2
Q ss_pred HHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhcccc
Q 008112 364 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATIT 443 (577)
Q Consensus 364 k~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~ 443 (577)
.-+...|+..|.++++-. |..+.-..+...-..|++.+...+ ..-++.+...+++++-...+.
T Consensus 89 ~a~A~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~v~~------~~~~~~~~a~~l~~~~~~~~i 151 (346)
T 3l6b_A 89 QALTYAAKLEGIPAYIVV-----------PQTAPDCKKLAIQAYGASIVYCEP------SDESRENVAKRVTEETEGIMV 151 (346)
T ss_dssp HHHHHHHHHTTCCEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECS------SHHHHHHHHHHHHHHHTCEEC
T ss_pred HHHHHHHHHhCCCEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECC------CHHHHHHHHHHHHHhcCCEEE
Confidence 345677999999987642 211222345556678999876643 235777777777665432221
Q ss_pred CCCCCCCCCcccCCChhHHHHHHHHHHHhhcCc--eEEEEcCChHHHHHHHh----hCCCCeEEEEcCcH
Q 008112 444 GGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGT--SIVVFTRTGFMAILLSH----YRPSGTIFAFTNEK 507 (577)
Q Consensus 444 ~~~~~~~l~~~~~~~~~~~ia~~a~~~a~~~~a--aIiV~T~sG~tA~~is~----~RP~~PIIAvT~~~ 507 (577)
+ . +.+ + ........-+.++.++++. .||+.+-+|.+.--+++ ..|.+.||++-+..
T Consensus 152 ~-~-~~n---p---~~~~g~~t~~~Ei~~q~~~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vigVe~~~ 213 (346)
T 3l6b_A 152 H-P-NQE---P---AVIAGQGTIALEVLNQVPLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEPSN 213 (346)
T ss_dssp C-S-SSC---H---HHHHHHHHHHHHHHHHSTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGG
T ss_pred C-C-CCC---h---HHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCC
Confidence 1 1 111 0 1122222334567777653 78999999988766654 47999999999864
No 230
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=50.43 E-value=72 Score=32.83 Aligned_cols=95 Identities=15% Similarity=0.006 Sum_probs=59.7
Q ss_pred HHHHHHhcCCCEEEE------cCCCCHHHHHHHHHHHHhcCCCceEEEeec---ChhhHhhHHHHHHh-cCEEEEcCCCc
Q 008112 281 DIKFGVDNKVDFYAV------SFVKDAQVVHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGDL 350 (577)
Q Consensus 281 dI~~al~~gvD~I~~------SfV~sa~dv~~lr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDGImIaRGDL 350 (577)
.+++-++.|+|+|++ .+.-|.++=.++.+. ..+.+++||+-+= |.++++......+. +|++|+-+-.+
T Consensus 52 lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~--~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y 129 (344)
T 2hmc_A 52 KGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER--LVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVL 129 (344)
T ss_dssp HHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH--HHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCS
T ss_pred HHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH--HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCcc
Confidence 346778899999976 355666666666665 3445788999874 36666666555555 99999975544
Q ss_pred cCCCCCCcHHHHHHHHHHHHH-HcCCceEEE
Q 008112 351 GAELPIEEVPLLQEEIIRTCR-SMGKAVIVA 380 (577)
Q Consensus 351 g~elg~e~v~~~qk~Ii~~c~-~aGKPvi~A 380 (577)
.-....+.+...-+.| |. +.+.|+++.
T Consensus 130 ~~~~s~~~l~~~f~~I---A~aa~~lPiilY 157 (344)
T 2hmc_A 130 SRGSVIAAQKAHFKAI---LSAAPEIPAVIY 157 (344)
T ss_dssp SSTTCHHHHHHHHHHH---HHHSTTSCEEEE
T ss_pred CCCCCHHHHHHHHHHH---HhhCCCCcEEEE
Confidence 2211222333333333 44 568999875
No 231
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=50.39 E-value=22 Score=38.47 Aligned_cols=50 Identities=22% Similarity=0.414 Sum_probs=41.7
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHH
Q 008112 109 KTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKE 158 (577)
Q Consensus 109 ~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~ 158 (577)
+..+-+.+|....+.+.++.|+++|+++.=||.+||......++++.+|+
T Consensus 217 rl~v~aavG~~~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~ 266 (490)
T 4avf_A 217 RLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQ 266 (490)
T ss_dssp CBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHH
T ss_pred cceeeeeeccccchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHH
Confidence 45566677887788999999999999999999999988777777776664
No 232
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=50.28 E-value=1.6e+02 Score=29.63 Aligned_cols=119 Identities=13% Similarity=0.100 Sum_probs=72.1
Q ss_pred HHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhcccc
Q 008112 364 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATIT 443 (577)
Q Consensus 364 k~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~ 443 (577)
.-+...|+..|.++++-. |.......+...-..|++.+...+ . .-++.+...+++++-. .++
T Consensus 101 ~alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~-----~-~~~~~~~a~~l~~~~~-~~~ 162 (342)
T 2gn0_A 101 QGVSLSCAMLGIDGKVVM-----------PKGAPKSKVAATCDYSAEVVLHGD-----N-FNDTIAKVSEIVETEG-RIF 162 (342)
T ss_dssp HHHHHHHHHHTCCEEEEE-----------CTTSCHHHHHHHHHHSCEEEECCS-----S-HHHHHHHHHHHHHHHC-CEE
T ss_pred HHHHHHHHHcCCCEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECC-----C-HHHHHHHHHHHHHhcC-CEE
Confidence 345678889999987642 222223345566678998775532 2 3467777666665422 221
Q ss_pred CCCCCCCCCcccCCChhHHHHHHHHHHHhhcC-c-eEEEEcCChHHHHHHHh----hCCCCeEEEEcCcH
Q 008112 444 GGAMPPNLGQAFKNHMSEMFAYHATMMSNTLG-T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTNEK 507 (577)
Q Consensus 444 ~~~~~~~l~~~~~~~~~~~ia~~a~~~a~~~~-a-aIiV~T~sG~tA~~is~----~RP~~PIIAvT~~~ 507 (577)
..+ |.+ + ........-+.++.++++ . .||+.+-+|.|+--+++ ..|...||++.+..
T Consensus 163 ~~~-~~n---~---~~~~g~~t~~~Ei~~q~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~ 225 (342)
T 2gn0_A 163 IPP-YDD---P---KVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGVQAEN 225 (342)
T ss_dssp CCS-SSS---H---HHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETT
T ss_pred eCC-CCC---H---HHHHHHHHHHHHHHHHcCCCCEEEEecCCchHHHHHHHHHHHhCCCCeEEEEEeCC
Confidence 111 111 0 112223333567777775 4 89999999998766654 47999999999853
No 233
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=49.89 E-value=34 Score=34.16 Aligned_cols=97 Identities=12% Similarity=0.044 Sum_probs=57.1
Q ss_pred HHHHHHHhcCCCEEEE------cCCCCHHHHHHHHHH-HHhcCCCceEEEeecC---hhhHhhHHHHHHh-cCEEEEcCC
Q 008112 280 DDIKFGVDNKVDFYAV------SFVKDAQVVHELKNY-LKSCGADIHVIVKIES---ADSIPNLHSIITA-SDGAMVARG 348 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~------SfV~sa~dv~~lr~~-l~~~~~~i~IiaKIEt---~~gv~NldeIl~~-sDGImIaRG 348 (577)
+.+++-++.|+|+|.+ .+.-|.++=.++.+. .+..+.+++||+-+=+ .++++......+. +|++|+-+-
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (292)
T 2ojp_A 26 KLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTP 105 (292)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 3456778899999976 334455555444443 4455667899998744 4555444444333 899998654
Q ss_pred CccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 349 DLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
.+.- .+.+.+...-+. .|.+.+.|+++.
T Consensus 106 ~y~~-~s~~~l~~~f~~---ia~a~~lPiilY 133 (292)
T 2ojp_A 106 YYNR-PSQEGLYQHFKA---IAEHTDLPQILY 133 (292)
T ss_dssp CSSC-CCHHHHHHHHHH---HHTTCSSCEEEE
T ss_pred CCCC-CCHHHHHHHHHH---HHHhcCCCEEEE
Confidence 4321 122233333333 345568999875
No 234
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=49.78 E-value=1.1e+02 Score=29.30 Aligned_cols=133 Identities=9% Similarity=0.041 Sum_probs=78.6
Q ss_pred HHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCC-ce-EEEeecChhhHhhHHHHHH-hcCEEEEcCCCccCC----CCCC
Q 008112 285 GVDNKVDFYAVSFVKDAQVVHELKNYLKSCGAD-IH-VIVKIESADSIPNLHSIIT-ASDGAMVARGDLGAE----LPIE 357 (577)
Q Consensus 285 al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~-i~-IiaKIEt~~gv~NldeIl~-~sDGImIaRGDLg~e----lg~e 357 (577)
+.+.|+|++.+-..-..+.++++++.+++.|.. .. -+..+-+ ...+.+.++++ -.|-+.+.++-++-. .+.+
T Consensus 78 ~~~~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~~~~~Vt~lts-~~~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv~s~~ 156 (221)
T 3exr_A 78 NAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYGD-WTYDQAQQWLDAGISQAIYHQSRDALLAGETWGEK 156 (221)
T ss_dssp HHTTTCSEEEEETTSCHHHHHHHHHHHHHHCTTTCEEEEECCSS-CCHHHHHHHHHTTCCEEEEECCHHHHHHTCCCCHH
T ss_pred HHHcCCCEEEEeccCCHHHHHHHHHHHHhcCCCcceEEEEEcCC-CCHHHHHHHHcCCHHHHHHHHHHhcCCCccccCHH
Confidence 567999999987766777799999988876632 22 3334432 24666777776 366666666554322 2222
Q ss_pred cHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHH
Q 008112 358 EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSL 436 (577)
Q Consensus 358 ~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~ 436 (577)
++..+. +.| ..+.++.+ |.-. .|. ++..++..|+|.+....--.....|.++++.+.+..+
T Consensus 157 e~~~ir----~~~-~~~~~i~v-~gGI-------~~~-----~~~~~~~aGad~~VvG~~I~~a~dp~~a~~~~~~~~~ 217 (221)
T 3exr_A 157 DLNKVK----KLI-EMGFRVSV-TGGL-------SVD-----TLKLFEGVDVFTFIAGRGITEAKNPAGAARAFKDEIK 217 (221)
T ss_dssp HHHHHH----HHH-HHTCEEEE-ESSC-------CGG-----GGGGGTTCCCSEEEECHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHHHHH----Hhh-cCCceEEE-ECCC-------CHH-----HHHHHHHCCCCEEEECchhhCCCCHHHHHHHHHHHHH
Confidence 232222 222 33455444 3222 122 2335778999999986433345679998888776554
No 235
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=49.58 E-value=1.3e+02 Score=29.51 Aligned_cols=95 Identities=22% Similarity=0.239 Sum_probs=56.4
Q ss_pred hHHHHHHh-cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccc
Q 008112 332 NLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGAD 410 (577)
Q Consensus 332 NldeIl~~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D 410 (577)
.+..+.+. +|.|+.-.++.|..-+... +...+++. +...+|+++.-.+ -+. .|+..++..|+|
T Consensus 139 ~a~~~~~~gad~v~~~~~~~Gt~~~~~~-~~~l~~i~---~~~~iPviv~gGI---------~t~---eda~~~~~~GAd 202 (264)
T 1xm3_A 139 LARKLEELGVHAIMPGASPIGSGQGILN-PLNLSFII---EQAKVPVIVDAGI---------GSP---KDAAYAMELGAD 202 (264)
T ss_dssp HHHHHHHHTCSCBEECSSSTTCCCCCSC-HHHHHHHH---HHCSSCBEEESCC---------CSH---HHHHHHHHTTCS
T ss_pred HHHHHHHhCCCEEEECCcccCCCCCCCC-HHHHHHHH---hcCCCCEEEEeCC---------CCH---HHHHHHHHcCCC
Confidence 34444444 6777543455554444333 22223332 2457899875432 223 457788899999
Q ss_pred eEEeccccCCCCCHHHHHHHHHHHHHHHhccc
Q 008112 411 AVMLSGETAHGKFPLKAVKVMHTVSLRTEATI 442 (577)
Q Consensus 411 ~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~ 442 (577)
++....--....-|.++++.+.+.+++....+
T Consensus 203 gViVGSAi~~a~dp~~~~~~l~~~v~~~~~~~ 234 (264)
T 1xm3_A 203 GVLLNTAVSGADDPVKMARAMKLAVEAGRLSY 234 (264)
T ss_dssp EEEESHHHHTSSSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99986533333569899988888777665443
No 236
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=49.39 E-value=43 Score=32.41 Aligned_cols=112 Identities=14% Similarity=0.165 Sum_probs=64.9
Q ss_pred CEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEee-cChh--hHhhHHHHHHh-cCEEEEcCCCccCCCCCCcHHHHHHHH
Q 008112 291 DFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKI-ESAD--SIPNLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEI 366 (577)
Q Consensus 291 D~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKI-Et~~--gv~NldeIl~~-sDGImIaRGDLg~elg~e~v~~~qk~I 366 (577)
..++.|| +.+.+..+++. ..++.+..-. +... ..+-++..... ++++-+.- ..+-...
T Consensus 143 ~v~i~Sf--~~~~l~~~~~~----~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~------------~~~~~~~ 204 (258)
T 2o55_A 143 RVDYCSF--HHEALAHLKAL----CPDVKITYLFNYMGQPTPLDFVEQACYGDANGVSMLF------------HYLTKEQ 204 (258)
T ss_dssp GEEEEES--SHHHHHHHHHH----CTTCEEEEECCTTSCCCCTTHHHHHHHTTCSEEEEEG------------GGCCHHH
T ss_pred CEEEEeC--CHHHHHHHHHH----CCCCcEEEEEeCCCCCCHHHHHHHHHhcCCeEEecCh------------hhcCHHH
Confidence 4677787 56667666654 3455554444 3321 11111111111 55554421 1223678
Q ss_pred HHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHH
Q 008112 367 IRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSL 436 (577)
Q Consensus 367 i~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~ 436 (577)
++.++++|++|.+-|-- . .+ -+..++..++..|+|+|+- .||..+.+++.++|+
T Consensus 205 v~~~~~~G~~v~~wTv~--~-----~~--n~~~~~~~l~~~GvdgI~T-------D~p~~~~~~l~~~~~ 258 (258)
T 2o55_A 205 VCTAHEKGLSVTVWMPW--I-----FD--DSEEDWKKCLELQVDLICS-------NYPFGLMNFLSNISE 258 (258)
T ss_dssp HHHHHHTTCEEEEECCT--T-----CC--CCHHHHHHHHHHTCSEEEE-------SCHHHHHHHHTC---
T ss_pred HHHHHHCCCEEEEeeCC--C-----CC--CCHHHHHHHHHcCCCEEEe-------CCHHHHHHHHHHhcC
Confidence 99999999999987730 0 11 1234456678899999875 699999999887774
No 237
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=49.05 E-value=47 Score=32.14 Aligned_cols=107 Identities=13% Similarity=0.033 Sum_probs=66.3
Q ss_pred CEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecCh----hhHhhHHHHHHh--cCEEEEcCCCccCCCCCCcHHHHHH
Q 008112 291 DFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESA----DSIPNLHSIITA--SDGAMVARGDLGAELPIEEVPLLQE 364 (577)
Q Consensus 291 D~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~----~gv~NldeIl~~--sDGImIaRGDLg~elg~e~v~~~qk 364 (577)
..+..|| +.+.+.++++. ..++.+. .+... .++..+-+.+.. +|.+... ...+-+
T Consensus 134 ~v~~~SF--~~~~l~~~~~~----~p~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 194 (250)
T 3ks6_A 134 RTTFSSF--LLASMDELWKA----TTRPRLW-LVSPSVLQQLGPGAVIETAIAHSIHEIGVH------------IDTADA 194 (250)
T ss_dssp GEEEEES--CHHHHHHHHHH----CCSCEEE-EECHHHHHHHHHHHHHHHHHHTTCCEEEEE------------GGGCCH
T ss_pred CEEEEeC--CHHHHHHHHHH----CCCCcEE-EEecccccccchhHHHHHHHhcCCCEEecc------------hhhCCH
Confidence 5778888 67777777663 3455543 33221 122222222222 3443322 122346
Q ss_pred HHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHH
Q 008112 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSL 436 (577)
Q Consensus 365 ~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~ 436 (577)
..++.|+++|++|.+=|- -+ -.++..++..|+|+|+- +||..+.+++.++-.
T Consensus 195 ~~v~~~~~~G~~V~~WTv----------n~---~~~~~~l~~~GVDgIiT-------D~P~~~~~~~~~~~~ 246 (250)
T 3ks6_A 195 GLMAQVQAAGLDFGCWAA----------HT---PSQITKALDLGVKVFTT-------DRPTLAIALRTEHRM 246 (250)
T ss_dssp HHHHHHHHTTCEEEEECC----------CS---HHHHHHHHHHTCSEEEE-------SCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEeC----------CC---HHHHHHHHHcCCCEEEc-------CCHHHHHHHHHHhhc
Confidence 889999999999998762 12 24566788899999986 699999888876643
No 238
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15
Probab=49.05 E-value=95 Score=31.55 Aligned_cols=92 Identities=13% Similarity=0.108 Sum_probs=55.4
Q ss_pred HHHHHhcCCCEEEEcCCCCHH---------------HHHHHHHHH----HhcCCCceEEEeecChhhHhhHH----HHHH
Q 008112 282 IKFGVDNKVDFYAVSFVKDAQ---------------VVHELKNYL----KSCGADIHVIVKIESADSIPNLH----SIIT 338 (577)
Q Consensus 282 I~~al~~gvD~I~~SfV~sa~---------------dv~~lr~~l----~~~~~~i~IiaKIEt~~gv~Nld----eIl~ 338 (577)
++.+++.|+|+|.+=-|.+-+ +...+...| +..+.+..|+.| .|.+-++ ++..
T Consensus 128 l~~~~~kG~DGvflDnvD~y~~~~~~~g~~~~~~~~~~~~~i~~La~~ar~~~P~~~ii~n----NG~~i~~~d~~~l~~ 203 (309)
T 2aam_A 128 LDRVIDQGFKGIYLDRIDSFEYWAQEGVISRRSAARKMINFVLEIAEYVRERKPDMLIIPQ----NGENILDFDDGQLAS 203 (309)
T ss_dssp HHHHHHTTCSEEEEECTTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEB----SCGGGGGGCCSHHHH
T ss_pred HHHHHHcCCCeEeecccchhhhccccCCcchhhhHHHHHHHHHHHHHHHHhhCCCcEEEEe----cCHHhhcccHhHHHh
Confidence 456788999999998886532 322222223 555667777765 3555555 7777
Q ss_pred hcCEEEEcCCCccC----CCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 339 ASDGAMVARGDLGA----ELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 339 ~sDGImIaRGDLg~----elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
..||+..- ++-- +.+ +.-......-+..++++||||+..
T Consensus 204 ~id~v~~E--s~~~~~~~~~~-~~e~~~~~~~l~~~~~~GkpV~~i 246 (309)
T 2aam_A 204 TVSGWAVE--NLFYLKTIPLE-ENETKSRLEYLIRLNRKGKFILSV 246 (309)
T ss_dssp HCSEEEEE--SSSEETTEECC-HHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hcCEEEee--eEEecCCCCCC-HHHHHHHHHHHHHHHHcCCcEEEE
Confidence 89998874 1211 111 112222234556778889999973
No 239
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=49.02 E-value=2.2e+02 Score=28.55 Aligned_cols=147 Identities=11% Similarity=0.065 Sum_probs=88.1
Q ss_pred CCCCccCHHHHHHHHhcCCCEEEEcC-------------CCCHHHHHHHHHHHHhcCCCceEEEeecC-------hhhHh
Q 008112 272 PSITEKDWDDIKFGVDNKVDFYAVSF-------------VKDAQVVHELKNYLKSCGADIHVIVKIES-------ADSIP 331 (577)
Q Consensus 272 p~ltekD~~dI~~al~~gvD~I~~Sf-------------V~sa~dv~~lr~~l~~~~~~i~IiaKIEt-------~~gv~ 331 (577)
..+|-+|.---+.+-+.|+|.|.+.. --+.+++...-+.+...-....|++=++- .++++
T Consensus 20 ~~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~ 99 (275)
T 1o66_A 20 AMLTAYESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFA 99 (275)
T ss_dssp EEEECCSHHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSSCHHHHHH
T ss_pred EEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccCCHHHHHH
Confidence 34577888888888889999997752 12345555444445444456678887763 35778
Q ss_pred hHHHHHHh-cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEE----Eehhh---HhhhcCCCCC--hHhHHHH
Q 008112 332 NLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIV----ATNML---ESMIVHPTPT--RAEVSDI 401 (577)
Q Consensus 332 NldeIl~~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~----ATq~L---eSM~~~~~Pt--rAEv~Dv 401 (577)
|...+++. +++|-+--|+ .+...|+++.++|+||+- --|-. ....-..+.. ..-+.|.
T Consensus 100 na~rl~kaGa~aVklEdg~------------e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA 167 (275)
T 1o66_A 100 AAAELMAAGAHMVKLEGGV------------WMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDA 167 (275)
T ss_dssp HHHHHHHTTCSEEEEECSG------------GGHHHHHHHHHTTCCEEEEEESCGGGTTC-----------CHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCcH------------HHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHH
Confidence 88888887 8999986441 234556777889999861 11111 1010111111 2233566
Q ss_pred HHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHh
Q 008112 402 AIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (577)
Q Consensus 402 ~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE 439 (577)
......|+|+++|-+ - |. .....|+++..
T Consensus 168 ~a~~eAGA~~ivlE~-----v-p~---~~a~~it~~l~ 196 (275)
T 1o66_A 168 KAHDDAGAAVVLMEC-----V-LA---ELAKKVTETVS 196 (275)
T ss_dssp HHHHHTTCSEEEEES-----C-CH---HHHHHHHHHCS
T ss_pred HHHHHcCCcEEEEec-----C-CH---HHHHHHHHhCC
Confidence 667888999999943 1 32 23456666554
No 240
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=48.95 E-value=1.6e+02 Score=30.08 Aligned_cols=128 Identities=15% Similarity=0.182 Sum_probs=69.3
Q ss_pred CCCccCHHHH--------HHHHhcCCCEEEEcCC-------------CCH------------HHHHHHHHHHHhcCCCce
Q 008112 273 SITEKDWDDI--------KFGVDNKVDFYAVSFV-------------KDA------------QVVHELKNYLKSCGADIH 319 (577)
Q Consensus 273 ~ltekD~~dI--------~~al~~gvD~I~~SfV-------------~sa------------~dv~~lr~~l~~~~~~i~ 319 (577)
.||..|++.+ +.+.+.|+|+|=+-.- +.. .-+.++.+.+.+.= +..
T Consensus 133 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~p 211 (340)
T 3gr7_A 133 EMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGP 211 (340)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCc
Confidence 6788888776 3556789999876433 211 11333333343332 667
Q ss_pred EEEeecChh------hHhhHHHHHH----h-cCEEEEcCCCccC-CCCCCcHHHHHHHHHHH-HHHcCCceEEEehhhHh
Q 008112 320 VIVKIESAD------SIPNLHSIIT----A-SDGAMVARGDLGA-ELPIEEVPLLQEEIIRT-CRSMGKAVIVATNMLES 386 (577)
Q Consensus 320 IiaKIEt~~------gv~NldeIl~----~-sDGImIaRGDLg~-elg~e~v~~~qk~Ii~~-c~~aGKPvi~ATq~LeS 386 (577)
|..||---+ -+++.-++++ . +|.|-+.-|.+.- .++.. +..+-..++. .+..++|+|....+
T Consensus 212 v~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~--~~~~~~~~~~ik~~~~iPVi~~GgI--- 286 (340)
T 3gr7_A 212 LFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVY--PGYQVPFAELIRREADIPTGAVGLI--- 286 (340)
T ss_dssp EEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCC--TTTTHHHHHHHHHHTTCCEEEESSC---
T ss_pred eEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCC--ccccHHHHHHHHHHcCCcEEeeCCC---
Confidence 888885321 1334444443 2 8988886443321 11111 1112223333 23458998875432
Q ss_pred hhcCCCCChHhHHHHHHHHHhc-cceEEec
Q 008112 387 MIVHPTPTRAEVSDIAIAVREG-ADAVMLS 415 (577)
Q Consensus 387 M~~~~~PtrAEv~Dv~nav~~G-~D~imLs 415 (577)
-+. .++..++..| +|+|++.
T Consensus 287 ------~s~---e~a~~~L~~G~aD~V~iG 307 (340)
T 3gr7_A 287 ------TSG---WQAEEILQNGRADLVFLG 307 (340)
T ss_dssp ------CCH---HHHHHHHHTTSCSEEEEC
T ss_pred ------CCH---HHHHHHHHCCCeeEEEec
Confidence 133 3455788888 9999985
No 241
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=48.63 E-value=34 Score=36.84 Aligned_cols=57 Identities=28% Similarity=0.376 Sum_probs=35.2
Q ss_pred CCHHHHHHHHHhCCcEEEEeccCCCh-------HHHHHHHHHHHHHHHhcCCCeeEEEeecCCC
Q 008112 121 NTREMIWKLAEAGMNVARLNMSHGDH-------ASHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (577)
Q Consensus 121 ~~~e~l~~li~~Gm~v~RiN~sHg~~-------e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~Gp 177 (577)
.+.+.|+.|.+.|+|++||-++.... ..-.+.++.++++.+.+..+-+.+++||-..
T Consensus 46 ~t~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~d~vv~~a~~~Gi~vildlH~~ 109 (515)
T 3icg_A 46 TTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHHE 109 (515)
T ss_dssp CCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEECCSC
T ss_pred CCHHHHHHHHHCCCCEEEEccchHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecCCC
Confidence 36899999999999999998874321 0011223333333222222448899998765
No 242
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=48.63 E-value=81 Score=30.99 Aligned_cols=131 Identities=21% Similarity=0.257 Sum_probs=77.3
Q ss_pred HHHHHHHhcCCCEEEE-----cCCCC----HHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCCC
Q 008112 280 DDIKFGVDNKVDFYAV-----SFVKD----AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGD 349 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~-----SfV~s----a~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGD 349 (577)
+.++...+.|+|++-+ .||.+ +.-++++|+... +.-+-+-.+|++++.. ++..+++ +|+|-|.
T Consensus 44 ~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p--~~~ldvHLmv~~p~~~--i~~~~~aGAd~itvH--- 116 (246)
T 3inp_A 44 DDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGI--TAGMDVHLMVKPVDAL--IESFAKAGATSIVFH--- 116 (246)
T ss_dssp HHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTC--CSCEEEEEECSSCHHH--HHHHHHHTCSEEEEC---
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCC--CCeEEEEEeeCCHHHH--HHHHHHcCCCEEEEc---
Confidence 4456666789998877 67653 566777766431 1223455678988653 6666666 9999985
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEe-ccccCCC-----CC
Q 008112 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML-SGETAHG-----KF 423 (577)
Q Consensus 350 Lg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imL-s~ETa~G-----~y 423 (577)
.|-. +. -.+.++.++++|+-++++... .+|- | ....+.+++|.|++ |-+.-.| .+
T Consensus 117 --~Ea~-~~----~~~~i~~ir~~G~k~Gvalnp-------~Tp~--e---~l~~~l~~vD~VlvMsV~PGfgGQ~fi~~ 177 (246)
T 3inp_A 117 --PEAS-EH----IDRSLQLIKSFGIQAGLALNP-------ATGI--D---CLKYVESNIDRVLIMSVNPGFGGQKFIPA 177 (246)
T ss_dssp --GGGC-SC----HHHHHHHHHTTTSEEEEEECT-------TCCS--G---GGTTTGGGCSEEEEECSCTTC--CCCCTT
T ss_pred --cccc-hh----HHHHHHHHHHcCCeEEEEecC-------CCCH--H---HHHHHHhcCCEEEEeeecCCCCCcccchH
Confidence 1222 12 256778889999999997531 1222 2 22344567998875 4343333 23
Q ss_pred HHHHHHHHHHHHH
Q 008112 424 PLKAVKVMHTVSL 436 (577)
Q Consensus 424 P~eaV~~m~~I~~ 436 (577)
.++=++.+++++.
T Consensus 178 ~l~KI~~lr~~~~ 190 (246)
T 3inp_A 178 MLDKAKEISKWIS 190 (246)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4444455554443
No 243
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=48.21 E-value=1.2e+02 Score=29.22 Aligned_cols=114 Identities=18% Similarity=0.207 Sum_probs=63.2
Q ss_pred HHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCE-EEEcC-CC-ccCCCCCCcHHH
Q 008112 285 GVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDG-AMVAR-GD-LGAELPIEEVPL 361 (577)
Q Consensus 285 al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDG-ImIaR-GD-Lg~elg~e~v~~ 361 (577)
+.+.|+|+|.++-... +++.++.+.+++.|.+..+... .....+.+.++.+..+| +.+.. .. -|..-+.. +.
T Consensus 114 a~~aGadgv~v~d~~~-~~~~~~~~~~~~~g~~~i~~~a--~~t~~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~~--~~ 188 (262)
T 1rd5_A 114 MKEAGVHGLIVPDLPY-VAAHSLWSEAKNNNLELVLLTT--PAIPEDRMKEITKASEGFVYLVSVNGVTGPRANVN--PR 188 (262)
T ss_dssp HHHTTCCEEECTTCBT-TTHHHHHHHHHHTTCEECEEEC--TTSCHHHHHHHHHHCCSCEEEECSSCCBCTTSCBC--TH
T ss_pred HHHcCCCEEEEcCCCh-hhHHHHHHHHHHcCCceEEEEC--CCCCHHHHHHHHhcCCCeEEEecCCCCCCCCcCCC--ch
Confidence 7789999999875433 4577777777766654333332 32335677777777553 43322 11 12221221 22
Q ss_pred HHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 362 LQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 362 ~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
..+.+-+..+..+.|+++...+ =|. .++..+...|+|++...
T Consensus 189 ~~~~i~~v~~~~~~pI~vgGGI---------~~~---e~~~~~~~~GAdgvvVG 230 (262)
T 1rd5_A 189 VESLIQEVKKVTNKPVAVGFGI---------SKP---EHVKQIAQWGADGVIIG 230 (262)
T ss_dssp HHHHHHHHHHHCSSCEEEESCC---------CSH---HHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhhcCCeEEEECCc---------CCH---HHHHHHHHcCCCEEEEC
Confidence 2222222333347898875442 223 34666777899999874
No 244
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=48.01 E-value=1.1e+02 Score=35.07 Aligned_cols=102 Identities=16% Similarity=0.126 Sum_probs=72.6
Q ss_pred CccCHHHHHHHHhcCCCEEEE-------------------cCCCCH--HHHHHHHHHHHhcCCCceEEEeecChhhHhh-
Q 008112 275 TEKDWDDIKFGVDNKVDFYAV-------------------SFVKDA--QVVHELKNYLKSCGADIHVIVKIESADSIPN- 332 (577)
Q Consensus 275 tekD~~dI~~al~~gvD~I~~-------------------SfV~sa--~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~N- 332 (577)
++.-++-|.||.++|.++|.+ +|++-- -|+.+|.+|.+++ .+.|+.-.|+..++.|
T Consensus 370 te~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sK--GV~iilw~~t~~~~~n~ 447 (738)
T 2d73_A 370 TANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARK--GIKMMMHHETSASVRNY 447 (738)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHT--TCEEEEEEECTTBHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhC--CCEEEEEEcCCCchhhH
Confidence 444578899999999999999 221111 2499999999874 5889999999875444
Q ss_pred ---HHHHHHh-----cCEEEEcC-CCccCCCCC----CcHHHHHHHHHHHHHHcCCceEE
Q 008112 333 ---LHSIITA-----SDGAMVAR-GDLGAELPI----EEVPLLQEEIIRTCRSMGKAVIV 379 (577)
Q Consensus 333 ---ldeIl~~-----sDGImIaR-GDLg~elg~----e~v~~~qk~Ii~~c~~aGKPvi~ 379 (577)
+|+.++. +.||-++= ||+ ++-+- +.+-....++++.|.+++.-|.+
T Consensus 448 e~~~d~~f~~~~~~Gv~GVKvdF~g~~-~~r~~~h~~Q~~v~~Y~~i~~~AA~~~LmVnf 506 (738)
T 2d73_A 448 ERHMDKAYQFMADNGYNSVKSGYVGNI-IPRGEHHYGQWMNNHYLYAVKKAADYKIMVNA 506 (738)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCSSC-BSTTCCTTSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccccC-cCCcccccchHHHHHHHHHHHHHHHcCcEEEc
Confidence 5555553 77998862 221 11121 34777888999999999988875
No 245
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=47.89 E-value=72 Score=29.92 Aligned_cols=86 Identities=19% Similarity=0.235 Sum_probs=52.1
Q ss_pred CHHHHHHHHhcCCCEEEEcCCCC--------HHHHHHHHHHHHhcCCCceEEE--eecChhhHhhHHHHHHh-cCEEEEc
Q 008112 278 DWDDIKFGVDNKVDFYAVSFVKD--------AQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITA-SDGAMVA 346 (577)
Q Consensus 278 D~~dI~~al~~gvD~I~~SfV~s--------a~dv~~lr~~l~~~~~~i~Iia--KIEt~~gv~NldeIl~~-sDGImIa 346 (577)
+.+++..+.+.|+|+|.++.+-. +.++..++++.... ++++++ -| |+ +|+.+.++. +||+.++
T Consensus 119 t~~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~--~~pvia~GGI-~~---~nv~~~~~~Ga~gv~vg 192 (221)
T 1yad_A 119 SLEEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRI--SIPVIAIGGM-TP---DRLRDVKQAGADGIAVM 192 (221)
T ss_dssp SHHHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHC--CSCEEEESSC-CG---GGHHHHHHTTCSEEEES
T ss_pred CHHHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhC--CCCEEEECCC-CH---HHHHHHHHcCCCEEEEh
Confidence 34667778889999999976521 22455555544433 455555 46 43 578888777 9999999
Q ss_pred CCCccCCCCCCcHHHHHHHHHHHHHHc
Q 008112 347 RGDLGAELPIEEVPLLQEEIIRTCRSM 373 (577)
Q Consensus 347 RGDLg~elg~e~v~~~qk~Ii~~c~~a 373 (577)
++=+.. ++....-+++.+..++.
T Consensus 193 s~i~~~----~d~~~~~~~~~~~~~~~ 215 (221)
T 1yad_A 193 SGIFSS----AEPLEAARRYSRKLKEM 215 (221)
T ss_dssp HHHHTS----SSHHHHHHHHHHHHHHH
T ss_pred HHhhCC----CCHHHHHHHHHHHHHHh
Confidence 764432 23344444454444443
No 246
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=47.83 E-value=1.1e+02 Score=29.61 Aligned_cols=130 Identities=16% Similarity=0.215 Sum_probs=76.6
Q ss_pred HHHHHHhcCCCEEEE-----cCCCC----HHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCCCc
Q 008112 281 DIKFGVDNKVDFYAV-----SFVKD----AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDL 350 (577)
Q Consensus 281 dI~~al~~gvD~I~~-----SfV~s----a~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGDL 350 (577)
.++.+ +.|+||+-+ .||.+ +..++.+|++. +..+-+-.|+++++- -++...++ +|+|.|-
T Consensus 18 ~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~---~~~~dvhLmv~dp~~--~i~~~~~aGAd~itvh---- 87 (231)
T 3ctl_A 18 QIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLA---TKPLDCHLMVTRPQD--YIAQLARAGADFITLH---- 87 (231)
T ss_dssp HHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTC---CSCEEEEEESSCGGG--THHHHHHHTCSEEEEC----
T ss_pred HHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhcc---CCcEEEEEEecCHHH--HHHHHHHcCCCEEEEC----
Confidence 34555 789887522 34433 55666666542 344667789998765 35667766 9999885
Q ss_pred cCCC-CCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEe-ccccCCC--CCHHH
Q 008112 351 GAEL-PIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML-SGETAHG--KFPLK 426 (577)
Q Consensus 351 g~el-g~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imL-s~ETa~G--~yP~e 426 (577)
.|. . . --.+.++.++++|+-++++.. |. |..| ....+.+++|.+++ |-+.-.| +|.-+
T Consensus 88 -~Ea~~----~-~~~~~i~~i~~~G~k~gv~ln--------p~-tp~~---~~~~~l~~~D~VlvmsV~pGfggQ~f~~~ 149 (231)
T 3ctl_A 88 -PETIN----G-QAFRLIDEIRRHDMKVGLILN--------PE-TPVE---AMKYYIHKADKITVMTVDPGFAGQPFIPE 149 (231)
T ss_dssp -GGGCT----T-THHHHHHHHHHTTCEEEEEEC--------TT-CCGG---GGTTTGGGCSEEEEESSCTTCSSCCCCTT
T ss_pred -cccCC----c-cHHHHHHHHHHcCCeEEEEEE--------CC-CcHH---HHHHHHhcCCEEEEeeeccCcCCccccHH
Confidence 122 1 1 135789999999999999752 21 2222 22345578998863 4444333 35544
Q ss_pred HHHHHHHHHHHH
Q 008112 427 AVKVMHTVSLRT 438 (577)
Q Consensus 427 aV~~m~~I~~~a 438 (577)
+++.++.+.+..
T Consensus 150 ~l~kI~~lr~~~ 161 (231)
T 3ctl_A 150 MLDKLAELKAWR 161 (231)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 444444444333
No 247
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=47.82 E-value=39 Score=33.25 Aligned_cols=67 Identities=6% Similarity=0.136 Sum_probs=44.1
Q ss_pred cCHHHHHHHHhcCCCEEEEcC------CCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh---cCEEEEcC
Q 008112 277 KDWDDIKFGVDNKVDFYAVSF------VKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA---SDGAMVAR 347 (577)
Q Consensus 277 kD~~dI~~al~~gvD~I~~Sf------V~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~---sDGImIaR 347 (577)
++++.+..+++.|+|+|.+.. --+.+...++.+.+...+.++.+++ | -||.+.+++... +||++||.
T Consensus 162 ~~~~E~~~a~~~gad~IGvn~~~l~~~~~dl~~~~~L~~~i~~~~~~~~vIA--e--gGI~s~~dv~~l~~Ga~gvlVGs 237 (254)
T 1vc4_A 162 HTERELEIALEAGAEVLGINNRDLATLHINLETAPRLGRLARKRGFGGVLVA--E--SGYSRKEELKALEGLFDAVLIGT 237 (254)
T ss_dssp CSHHHHHHHHHHTCSEEEEESBCTTTCCBCTTHHHHHHHHHHHTTCCSEEEE--E--SCCCSHHHHHTTTTTCSEEEECH
T ss_pred CCHHHHHHHHHcCCCEEEEccccCcCCCCCHHHHHHHHHhCccccCCCeEEE--E--cCCCCHHHHHHHHcCCCEEEEeH
Confidence 456677888999999998844 3334445555555543223567777 3 367767766665 78999984
No 248
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=47.74 E-value=58 Score=34.31 Aligned_cols=55 Identities=13% Similarity=0.313 Sum_probs=37.3
Q ss_pred cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHh-cc-ceEEe
Q 008112 340 SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVRE-GA-DAVML 414 (577)
Q Consensus 340 sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~-G~-D~imL 414 (577)
+|.+=||-+|+. .++ +++.+.+.|||+|+.|.|- |-+|+...++.+.. |. +.++|
T Consensus 135 vd~~KIgS~~~~------N~p-----LL~~va~~gKPViLStGma---------Tl~Ei~~Ave~i~~~Gn~~iiLl 191 (385)
T 1vli_A 135 PSAFKIASYEIN------HLP-----LLKYVARLNRPMIFSTAGA---------EISDVHEAWRTIRAEGNNQIAIM 191 (385)
T ss_dssp CSCEEECGGGTT------CHH-----HHHHHHTTCSCEEEECTTC---------CHHHHHHHHHHHHTTTCCCEEEE
T ss_pred CCEEEECccccc------CHH-----HHHHHHhcCCeEEEECCCC---------CHHHHHHHHHHHHHCCCCcEEEE
Confidence 566777766652 333 3555667899999988763 77888888887764 55 55555
No 249
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=47.73 E-value=36 Score=33.86 Aligned_cols=116 Identities=14% Similarity=0.139 Sum_probs=66.0
Q ss_pred HHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEcC---CCccCCCCC
Q 008112 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVAR---GDLGAELPI 356 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIaR---GDLg~elg~ 356 (577)
+.++.+.+.|+|++.++=+-. +++.++.+.+++.|-+ .+..+--....+.+++|.+.+.|....- |--|..-+
T Consensus 110 ~f~~~~~~aG~dGviv~Dl~~-ee~~~~~~~~~~~gl~--~i~liap~s~~eri~~ia~~~~gfiy~vs~~G~TG~~~~- 185 (271)
T 1ujp_A 110 RFFGLFKQAGATGVILPDLPP-DEDPGLVRLAQEIGLE--TVFLLAPTSTDARIATVVRHATGFVYAVSVTGVTGMRER- 185 (271)
T ss_dssp HHHHHHHHHTCCEEECTTCCG-GGCHHHHHHHHHHTCE--EECEECTTCCHHHHHHHHTTCCSCEEEECC----------
T ss_pred HHHHHHHHcCCCEEEecCCCH-HHHHHHHHHHHHcCCc--eEEEeCCCCCHHHHHHHHHhCCCCEEEEecCcccCCCCC-
Confidence 455667788999999887654 6777888888776643 3333333234568899998866544221 11122111
Q ss_pred CcHHHHHHHHHHHHHHc-CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 357 EEVPLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 357 e~v~~~qk~Ii~~c~~a-GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
++.-..+.++..+++ +.|+++... .=|.+. +..+ .|+|+++..
T Consensus 186 --~~~~~~~~v~~vr~~~~~Pv~vGfG---------I~t~e~---a~~~--~~ADgVIVG 229 (271)
T 1ujp_A 186 --LPEEVKDLVRRIKARTALPVAVGFG---------VSGKAT---AAQA--AVADGVVVG 229 (271)
T ss_dssp -----CCHHHHHHHHTTCCSCEEEESC---------CCSHHH---HHHH--TTSSEEEEC
T ss_pred --CCccHHHHHHHHHhhcCCCEEEEcC---------CCCHHH---HHHh--cCCCEEEEC
Confidence 111113445555554 789987654 224433 4443 899999974
No 250
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=47.67 E-value=1.2e+02 Score=30.00 Aligned_cols=96 Identities=16% Similarity=0.130 Sum_probs=57.0
Q ss_pred HHHHHHHhcCCCEEEEc------CCCCHHHHHHHHHHHHhcCCCceEEEeec---ChhhHhhHHHHHHh-cCEEEEcCCC
Q 008112 280 DDIKFGVDNKVDFYAVS------FVKDAQVVHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGD 349 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~S------fV~sa~dv~~lr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDGImIaRGD 349 (577)
+.+++-++.|+|+|.+. +--|.++=.++.+...+.... ||+-+= |.++++.....-+. +|++|+-+-.
T Consensus 23 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 100 (286)
T 2r91_A 23 NHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR--VIVQVASLNADEAIALAKYAESRGAEAVASLPPY 100 (286)
T ss_dssp HHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS--EEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 44567788999999862 444555555555544333233 888763 46666666655555 9999997554
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 350 Lg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
+.--.+.+.+...-+ ..|.+.+.|+++.
T Consensus 101 y~~~~s~~~l~~~f~---~va~a~~lPiilY 128 (286)
T 2r91_A 101 YFPRLSERQIAKYFR---DLCSAVSIPVFLY 128 (286)
T ss_dssp SSTTCCHHHHHHHHH---HHHHHCSSCEEEE
T ss_pred CCCCCCHHHHHHHHH---HHHHhcCCCEEEE
Confidence 422012223333333 4455668999875
No 251
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=47.49 E-value=29 Score=36.49 Aligned_cols=62 Identities=18% Similarity=0.243 Sum_probs=42.0
Q ss_pred HHHHHHHHhcCCCEEEEcCC---------CCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh----cCEEEE
Q 008112 279 WDDIKFGVDNKVDFYAVSFV---------KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA----SDGAMV 345 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV---------~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~----sDGImI 345 (577)
.++.+.+.+.|+|+|.+|.- -+.+-+.++++.+ +.++.||+- -||.+-.+++++ +|++||
T Consensus 263 ~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av---~~~ipVia~----GGI~~g~Dv~kalalGAd~V~i 335 (392)
T 2nzl_A 263 GDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAV---EGKVEVFLD----GGVRKGTDVLKALALGAKAVFV 335 (392)
T ss_dssp HHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHH---TTSSEEEEC----SSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHc---CCCCEEEEE----CCCCCHHHHHHHHHhCCCeeEE
Confidence 67788899999999999632 1223344444433 456888872 456666666654 999999
Q ss_pred cC
Q 008112 346 AR 347 (577)
Q Consensus 346 aR 347 (577)
||
T Consensus 336 Gr 337 (392)
T 2nzl_A 336 GR 337 (392)
T ss_dssp CH
T ss_pred CH
Confidence 98
No 252
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=47.32 E-value=1.1e+02 Score=32.07 Aligned_cols=65 Identities=22% Similarity=0.163 Sum_probs=45.2
Q ss_pred CccCHHHHHHHHhc-CCCEEEEcC-------CCCHHHHHHHHHHHHhcCCCceEEEee---c--------ChhhHhhHHH
Q 008112 275 TEKDWDDIKFGVDN-KVDFYAVSF-------VKDAQVVHELKNYLKSCGADIHVIVKI---E--------SADSIPNLHS 335 (577)
Q Consensus 275 tekD~~dI~~al~~-gvD~I~~Sf-------V~sa~dv~~lr~~l~~~~~~i~IiaKI---E--------t~~gv~Nlde 335 (577)
.+.|...|+.+.+. |+++|-++- +-+.+++.++++.+.+.|-.+..+.-+ | ..+.++++..
T Consensus 29 g~~d~~~L~~i~q~~G~~gIe~~l~~~~~g~~w~~~~i~~lk~~l~~~GL~i~~i~s~~~~~~i~~~~~~r~~~ie~~k~ 108 (386)
T 3bdk_A 29 GKKDPVTLEEIKAIPGMQGIVTAVYDVPVGQAWPLENILELKKMVEEAGLEITVIESIPVHEDIKQGKPNRDALIENYKT 108 (386)
T ss_dssp CTTCSSCHHHHHTSTTCCEEEECCCSSCSSSCCCHHHHHHHHHHHHTTTCEEEEEECCCCCHHHHTTCTTHHHHHHHHHH
T ss_pred CCCCHHHHHHHHhcCCCCEEEeCCcccCCCCCCCHHHHHHHHHHHHHcCCEEEEEeccccccccccCcHHHHHHHHHHHH
Confidence 44666788888999 999998762 567899999999998877654443211 0 1345667766
Q ss_pred HHHh
Q 008112 336 IITA 339 (577)
Q Consensus 336 Il~~ 339 (577)
.+..
T Consensus 109 ~i~~ 112 (386)
T 3bdk_A 109 SIRN 112 (386)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 253
>2kct_A Cytochrome C-type biogenesis protein CCME; solution structure, heme chaperone, cytochrome C biogenesis, OB-fold domain, NESG, PSI-2; NMR {Desulfovibrio vulgaris str}
Probab=47.10 E-value=75 Score=26.83 Aligned_cols=55 Identities=18% Similarity=0.202 Sum_probs=39.8
Q ss_pred CCCeeEEeecC--CcEEEc-CCCEEEEEEecCCCCceEEeccccccc-cccCCCCEEEE
Q 008112 175 KGPEVRSGDLP--QPITLT-SGQEFTFTIQRGVGSAECVSVNYDDFV-NDVEVGDMLLV 229 (577)
Q Consensus 175 ~GpkiR~g~~~--~~i~L~-~G~~v~lt~~~~~~~~~~i~v~~~~~~-~~v~~Gd~I~i 229 (577)
.|..+|+|.+- +++.-. .|..++|...+.......++|.|..++ +..+.|.-|..
T Consensus 7 ~~~~iRvgG~V~~GSv~r~~~~~~v~F~vtD~~~~~~~v~V~Y~GilPDlFrEGqgVV~ 65 (94)
T 2kct_A 7 KLHTVRLFGTVAADGLTMLDGAPGVRFRLEDKDNTSKTVWVLYKGAVPDTFKPGVEVII 65 (94)
T ss_dssp TTCCEEEEEEECSTTCEECTTSSEEEEEEECSSCTTCEEEEEEESCCCTTCCTTCEEEE
T ss_pred CCCeEEEeeEEeCCeEEecCCCCEEEEEEEcCCCCCcEEEEEECCCCCccccCCCeEEE
Confidence 67899999763 455444 478899998765444578999998654 56688888776
No 254
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=47.10 E-value=90 Score=31.68 Aligned_cols=30 Identities=20% Similarity=0.303 Sum_probs=22.3
Q ss_pred CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 374 GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 374 GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
++|+|....+- + -.|+..++..|+|++++.
T Consensus 251 ~ipvia~GGI~---------~---~~d~~k~l~~GAd~V~iG 280 (349)
T 1p0k_A 251 ASTMIASGGLQ---------D---ALDVAKAIALGASCTGMA 280 (349)
T ss_dssp TSEEEEESSCC---------S---HHHHHHHHHTTCSEEEEC
T ss_pred CCeEEEECCCC---------C---HHHHHHHHHcCCCEEEEc
Confidence 68888654332 2 357889999999999986
No 255
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=47.08 E-value=2.3e+02 Score=28.32 Aligned_cols=132 Identities=13% Similarity=0.104 Sum_probs=80.8
Q ss_pred CCCCCccCHHHHHHHHhcCCCEEEEcCC-------------CCHHHHHHHHHHHHhcCCCceEEEeecCh------hhHh
Q 008112 271 LPSITEKDWDDIKFGVDNKVDFYAVSFV-------------KDAQVVHELKNYLKSCGADIHVIVKIESA------DSIP 331 (577)
Q Consensus 271 lp~ltekD~~dI~~al~~gvD~I~~SfV-------------~sa~dv~~lr~~l~~~~~~i~IiaKIEt~------~gv~ 331 (577)
+..+|-+|.---+.+-+.|+|.|.+..- -+.+++..--+.+...-++..+++=+|+- ++++
T Consensus 31 i~m~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY~s~~~a~~ 110 (275)
T 3vav_A 31 IAMLTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYGTPADAFA 110 (275)
T ss_dssp EEEEECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSCSSHHHHHH
T ss_pred EEEEeCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCCCCHHHHHH
Confidence 3455888988888888999999987621 12344443333444444568999999983 5677
Q ss_pred hHHHHHHh-cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEe----hhhHhh---hcCCCCChH----hHH
Q 008112 332 NLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVAT----NMLESM---IVHPTPTRA----EVS 399 (577)
Q Consensus 332 NldeIl~~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~AT----q~LeSM---~~~~~PtrA----Ev~ 399 (577)
|...++++ +++|-+--|. .....|++..++|+|++--. |-...+ .-.. -|.+ -+.
T Consensus 111 ~a~rl~kaGa~aVklEdg~------------~~~~~i~~l~~~GIpv~gHlgltPq~~~~~gg~~vqg-rt~~~a~~~i~ 177 (275)
T 3vav_A 111 SAVKLMRAGAQMVKFEGGE------------WLAETVRFLVERAVPVCAHVGLTPQSVHAFGGFKVQG-KTEAGAAQLLR 177 (275)
T ss_dssp HHHHHHHTTCSEEEEECCG------------GGHHHHHHHHHTTCCEEEEEESCGGGHHHHC---CCC-CSHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCch------------hHHHHHHHHHHCCCCEEEecCCCceEEeccCCeEEEc-CCHHHHHHHHH
Confidence 77777776 8899986441 22445666678999997421 111111 1111 1222 124
Q ss_pred HHHHHHHhccceEEec
Q 008112 400 DIAIAVREGADAVMLS 415 (577)
Q Consensus 400 Dv~nav~~G~D~imLs 415 (577)
|.......|+|+++|=
T Consensus 178 rA~a~~eAGA~~ivlE 193 (275)
T 3vav_A 178 DARAVEEAGAQLIVLE 193 (275)
T ss_dssp HHHHHHHHTCSEEEEE
T ss_pred HHHHHHHcCCCEEEec
Confidence 4444667788888874
No 256
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=47.05 E-value=1.8e+02 Score=26.97 Aligned_cols=127 Identities=13% Similarity=0.096 Sum_probs=72.6
Q ss_pred HHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecCh---------hhHhhHHHHHHh-cCEEEEcCCCccC
Q 008112 283 KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESA---------DSIPNLHSIITA-SDGAMVARGDLGA 352 (577)
Q Consensus 283 ~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~---------~gv~NldeIl~~-sDGImIaRGDLg~ 352 (577)
+.+.+.|++++.+ .+.+.++++++.. +.+++..+.+. .-.+.++..++. +|.+.++-.++.
T Consensus 30 ~~~~~~Ga~~i~~---~~~~~i~~i~~~~-----~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~~- 100 (223)
T 1y0e_A 30 LAAYEGGAVGIRA---NTKEDILAIKETV-----DLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQQ- 100 (223)
T ss_dssp HHHHHHTCSEEEE---ESHHHHHHHHHHC-----CSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCSC-
T ss_pred HHHHHCCCeeecc---CCHHHHHHHHHhc-----CCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEEeeeccc-
Confidence 4456789999865 5888888888754 34444322110 112455555555 899988744321
Q ss_pred CCCCCcHHHHHHHHHHHHHHc--CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEecc--ccCCCCC---HH
Q 008112 353 ELPIEEVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG--ETAHGKF---PL 425 (577)
Q Consensus 353 elg~e~v~~~qk~Ii~~c~~a--GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~--ETa~G~y---P~ 425 (577)
-|.+.+ .++++.+++. |+++++-. -|..| +..+...|+|.++++. -|..+.. ..
T Consensus 101 -~p~~~~----~~~i~~~~~~~~~~~v~~~~-----------~t~~e---~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~ 161 (223)
T 1y0e_A 101 -RPKETL----DELVSYIRTHAPNVEIMADI-----------ATVEE---AKNAARLGFDYIGTTLHGYTSYTQGQLLYQ 161 (223)
T ss_dssp -CSSSCH----HHHHHHHHHHCTTSEEEEEC-----------SSHHH---HHHHHHTTCSEEECTTTTSSTTSTTCCTTH
T ss_pred -CcccCH----HHHHHHHHHhCCCceEEecC-----------CCHHH---HHHHHHcCCCEEEeCCCcCcCCCCCCCCCc
Confidence 111222 4677777877 88887532 23333 4567889999998753 2222111 22
Q ss_pred HHHHHHHHHHHH
Q 008112 426 KAVKVMHTVSLR 437 (577)
Q Consensus 426 eaV~~m~~I~~~ 437 (577)
..++.+.++...
T Consensus 162 ~~~~~~~~~~~~ 173 (223)
T 1y0e_A 162 NDFQFLKDVLQS 173 (223)
T ss_dssp HHHHHHHHHHHH
T ss_pred ccHHHHHHHHhh
Confidence 345566666544
No 257
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=46.87 E-value=43 Score=33.35 Aligned_cols=65 Identities=12% Similarity=0.170 Sum_probs=49.3
Q ss_pred CHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEE--eecChhhHhhHHHHHHh-cCEEEEcC
Q 008112 278 DWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITA-SDGAMVAR 347 (577)
Q Consensus 278 D~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~Iia--KIEt~~gv~NldeIl~~-sDGImIaR 347 (577)
..+.++.+++.|+|+|.+.. -++++++++++.+.....+++|.+ -| -.+|+.++++. +|+|-+|.
T Consensus 191 tlee~~~A~~aGaD~I~ld~-~~~~~l~~~v~~l~~~~~~~~i~AsGGI----~~~ni~~~~~aGaD~i~vGs 258 (273)
T 2b7n_A 191 SFEEAKNAMNAGADIVMCDN-LSVLETKEIAAYRDAHYPFVLLEASGNI----SLESINAYAKSGVDAISVGA 258 (273)
T ss_dssp SHHHHHHHHHHTCSEEEEET-CCHHHHHHHHHHHHHHCTTCEEEEESSC----CTTTHHHHHTTTCSEEECTH
T ss_pred CHHHHHHHHHcCCCEEEECC-CCHHHHHHHHHHhhccCCCcEEEEECCC----CHHHHHHHHHcCCcEEEEcH
Confidence 35678888999999999987 478999998888865444565554 23 24688888887 99998874
No 258
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=46.58 E-value=52 Score=33.27 Aligned_cols=103 Identities=16% Similarity=0.190 Sum_probs=66.7
Q ss_pred CCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEE---ehhhHhhh--
Q 008112 315 GADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA---TNMLESMI-- 388 (577)
Q Consensus 315 ~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A---Tq~LeSM~-- 388 (577)
+..++|...+......+.+.+-+.. ..-+|+.. -++|+++=...-+++++.|++.|..|=.= +.--|.-+
T Consensus 78 ~~~VPValHlDHg~~~e~i~~ai~~GFtSVMiDg----S~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~ 153 (288)
T 3q94_A 78 NITVPVAIHLDHGSSFEKCKEAIDAGFTSVMIDA----SHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIA 153 (288)
T ss_dssp TCCSCEEEEEEEECSHHHHHHHHHHTCSEEEECC----TTSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGG
T ss_pred CCCCcEEEECCCCCCHHHHHHHHHcCCCeEEEeC----CCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCC
Confidence 5678888888777655444443433 66899953 24688876777789999999999877310 10001000
Q ss_pred -cCCCCChHhHHHHHHHH-HhccceEEeccccCCCCCH
Q 008112 389 -VHPTPTRAEVSDIAIAV-REGADAVMLSGETAHGKFP 424 (577)
Q Consensus 389 -~~~~PtrAEv~Dv~nav-~~G~D~imLs~ETa~G~yP 424 (577)
....-+.. ++..++ .-|+|++-.+-=|+.|.||
T Consensus 154 ~~~~yT~Pe---ea~~Fv~~TgvD~LAvaiGt~HG~Y~ 188 (288)
T 3q94_A 154 EGVIYADPA---ECKHLVEATGIDCLAPALGSVHGPYK 188 (288)
T ss_dssp GGCBCCCHH---HHHHHHHHHCCSEEEECSSCBSSCCS
T ss_pred ccccCCCHH---HHHHHHHHHCCCEEEEEcCcccCCcC
Confidence 01122333 455555 4899999999999999998
No 259
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=46.53 E-value=1.7e+02 Score=29.08 Aligned_cols=108 Identities=13% Similarity=0.139 Sum_probs=74.3
Q ss_pred cCHHHHHH-HHhcCCCEEEE-----cCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHh---hHHHHHHh-cCEEEEc
Q 008112 277 KDWDDIKF-GVDNKVDFYAV-----SFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIP---NLHSIITA-SDGAMVA 346 (577)
Q Consensus 277 kD~~dI~~-al~~gvD~I~~-----SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~---NldeIl~~-sDGImIa 346 (577)
.|...+.. ..+.|+++|.+ -|=.+.+++.++++.. +++|+.| +.+- .+++.... +|+|.+.
T Consensus 79 ~dp~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v-----~lPVl~K----dfi~d~~qi~ea~~~GAD~VlLi 149 (272)
T 3tsm_A 79 FDPPALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQAC-----SLPALRK----DFLFDPYQVYEARSWGADCILII 149 (272)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHTS-----SSCEEEE----SCCCSTHHHHHHHHTTCSEEEEE
T ss_pred CCHHHHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHhc-----CCCEEEC----CccCCHHHHHHHHHcCCCEEEEc
Confidence 35555544 34678999987 3557999999998643 5788876 1212 34554444 9999987
Q ss_pred CCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 347 RGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 347 RGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
-.+| + ..--++++..|+..|.-+++-++ +..| +..|...|+|.|-.+
T Consensus 150 ~a~L----~----~~~l~~l~~~a~~lGl~~lvevh-----------~~eE---l~~A~~~ga~iIGin 196 (272)
T 3tsm_A 150 MASV----D----DDLAKELEDTAFALGMDALIEVH-----------DEAE---MERALKLSSRLLGVN 196 (272)
T ss_dssp TTTS----C----HHHHHHHHHHHHHTTCEEEEEEC-----------SHHH---HHHHTTSCCSEEEEE
T ss_pred cccc----C----HHHHHHHHHHHHHcCCeEEEEeC-----------CHHH---HHHHHhcCCCEEEEC
Confidence 6555 1 23456788899999999888665 4444 456778999988765
No 260
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=46.39 E-value=2.7e+02 Score=28.81 Aligned_cols=155 Identities=15% Similarity=0.132 Sum_probs=96.0
Q ss_pred CCCccCHHHHHHH-HhcCCCEEEEcC-CCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cC--EEEEcC
Q 008112 273 SITEKDWDDIKFG-VDNKVDFYAVSF-VKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SD--GAMVAR 347 (577)
Q Consensus 273 ~ltekD~~dI~~a-l~~gvD~I~~Sf-V~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sD--GImIaR 347 (577)
.++..|+..|... .+.|+|.|=+-| ..++.+.+.++. +.+.+.+..+.+-.-. -.++++..++. .| .++++-
T Consensus 21 ~~~~~~k~~ia~~L~~~Gv~~IE~g~p~~~~~~~~~~~~-i~~~~~~~~v~~~~r~--~~~di~~a~~~g~~~v~i~~~~ 97 (382)
T 2ztj_A 21 NFSTQDKVEIAKALDEFGIEYIEVTTPVASPQSRKDAEV-LASLGLKAKVVTHIQC--RLDAAKVAVETGVQGIDLLFGT 97 (382)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHH-HHTSCCSSEEEEEEES--CHHHHHHHHHTTCSEEEEEECC
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEcCCcCCHHHHHHHHH-HHhcCCCcEEEEEccc--ChhhHHHHHHcCCCEEEEEecc
Confidence 4556666665444 468999998866 456677666655 4444566666654311 12334444443 56 445554
Q ss_pred CCccCC---CCCCcHHHHHHHHHHHHHHcC--CceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCC
Q 008112 348 GDLGAE---LPIEEVPLLQEEIIRTCRSMG--KAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGK 422 (577)
Q Consensus 348 GDLg~e---lg~e~v~~~qk~Ii~~c~~aG--KPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~ 422 (577)
-|+-.. +..+++....+..++.++++| ..+.+.- ...+.-+...+.+++.++.+-+|.|.|. +|.=.-
T Consensus 98 s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~------ed~~~~~~~~~~~~~~~~~~~a~~i~l~-DT~G~~ 170 (382)
T 2ztj_A 98 SKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSA------EDTFRSEEQDLLAVYEAVAPYVDRVGLA-DTVGVA 170 (382)
T ss_dssp --------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEE------TTTTTSCHHHHHHHHHHHGGGCSEEEEE-ETTSCC
T ss_pred CHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEE------EeCCCCCHHHHHHHHHHHHHhcCEEEec-CCCCCC
Confidence 443222 123355566678899999999 6655432 1334556667788888666669999995 888888
Q ss_pred CHHHHHHHHHHHHHH
Q 008112 423 FPLKAVKVMHTVSLR 437 (577)
Q Consensus 423 yP~eaV~~m~~I~~~ 437 (577)
.|.++-+.+..+...
T Consensus 171 ~P~~~~~lv~~l~~~ 185 (382)
T 2ztj_A 171 TPRQVYALVREVRRV 185 (382)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh
Confidence 999998888888765
No 261
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=45.96 E-value=67 Score=31.75 Aligned_cols=126 Identities=14% Similarity=0.124 Sum_probs=69.9
Q ss_pred HHHHHHHHhcCCCEEEEc--------------CCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEE
Q 008112 279 WDDIKFGVDNKVDFYAVS--------------FVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGA 343 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~S--------------fV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGI 343 (577)
.+.++...+.|+++|-+. ..++.+.++++++. .+++++.++-... .+.++...+. +|+|
T Consensus 31 ~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~-----~~~Pvi~~~~~~~-~~~~~~~~~aGad~v 104 (297)
T 2zbt_A 31 PEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAA-----VSIPVMAKVRIGH-FVEAMILEAIGVDFI 104 (297)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHTT-----CSSCEEEEEETTC-HHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHHh-----cCCCeEEEeccCC-HHHHHHHHHCCCCEE
Confidence 456667788999999651 12344555544432 2466666542221 4555666555 8999
Q ss_pred EEcCCCccCCCCCCcHHHHHHHHHHHHHH--cCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCC
Q 008112 344 MVARGDLGAELPIEEVPLLQEEIIRTCRS--MGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHG 421 (577)
Q Consensus 344 mIaRGDLg~elg~e~v~~~qk~Ii~~c~~--aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G 421 (577)
|........+ +++.+++ .+++++.-+. +..| ...+...|+|.+...+|...|
T Consensus 105 -----~~~~~~~~~~-------~~~~~~~~~~~i~l~~~v~-----------~~~~---~~~a~~~Gad~I~v~G~~~~g 158 (297)
T 2zbt_A 105 -----DESEVLTPAD-------EEHHIDKWKFKVPFVCGAR-----------NLGE---ALRRIAEGAAMIRTKGEAGTG 158 (297)
T ss_dssp -----EEETTSCCSC-------SSCCCCGGGCSSCEEEEES-----------SHHH---HHHHHHTTCSEEEECCCSSSC
T ss_pred -----eeeCCCChHH-------HHHHHHHhCCCceEEeecC-----------CHHH---HHHHHHcCCCEEEEcccccCc
Confidence 3222222211 1222222 2666663221 2233 445788999999999998888
Q ss_pred CCHHHHHHHHHHHHHH
Q 008112 422 KFPLKAVKVMHTVSLR 437 (577)
Q Consensus 422 ~yP~eaV~~m~~I~~~ 437 (577)
-..++..-++++...
T Consensus 159 -~~~e~~~~~~~~~~~ 173 (297)
T 2zbt_A 159 -NVVEAVRHARTMWKE 173 (297)
T ss_dssp -CTHHHHHHHHHHHHH
T ss_pred -chHHHHhhHHHHHHH
Confidence 455666665555443
No 262
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=45.96 E-value=30 Score=33.85 Aligned_cols=53 Identities=13% Similarity=0.170 Sum_probs=33.9
Q ss_pred CCHHHHHHHH-HhCCcEEEEeccCC-------ChHHHHHHHHHHHHHHHhcCCCeeEEEeecCC
Q 008112 121 NTREMIWKLA-EAGMNVARLNMSHG-------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (577)
Q Consensus 121 ~~~e~l~~li-~~Gm~v~RiN~sHg-------~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~G 176 (577)
.+.+.++.|. +.|+|++|+-+... +++...+.++.+=+...+.| +.+++|+.+
T Consensus 39 ~~~~d~~~l~~~~G~N~vR~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~G---i~vild~h~ 99 (291)
T 1egz_A 39 YTADTVASLKKDWKSSIVRAAMGVQESGGYLQDPAGNKAKVERVVDAAIAND---MYAIIGWHS 99 (291)
T ss_dssp CSHHHHHHHHHTTCCCEEEEEEECSSTTSTTTCHHHHHHHHHHHHHHHHHTT---CEEEEEEEC
T ss_pred CCHHHHHHHHHHcCCCEEEEeccccccCCCcCCHHHHHHHHHHHHHHHHHCC---CEEEEEcCC
Confidence 4678999999 79999999987643 22333333333333344455 667888744
No 263
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=45.95 E-value=1.5e+02 Score=30.42 Aligned_cols=119 Identities=13% Similarity=0.063 Sum_probs=70.4
Q ss_pred HHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhccccC
Q 008112 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (577)
Q Consensus 365 ~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~~ 444 (577)
-+...|+..|.++++-. |.......+...-..|++.+...+ .| .++.+...+++.+.+..++.
T Consensus 107 alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~-----~~-~~a~~~a~~l~~~~~~~~~v 169 (372)
T 1p5j_A 107 AAAYAARQLGVPATIVV-----------PGTTPALTIERLKNEGATCKVVGE-----LL-DEAFELAKALAKNNPGWVYI 169 (372)
T ss_dssp HHHHHHHHHTCCEEEEE-----------CTTCCHHHHHHHHHTTCEEEECCS-----CH-HHHHHHHHHHHHHSTTEEEC
T ss_pred HHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHhcCCEEEEECC-----CH-HHHHHHHHHHHHhcCCcEEe
Confidence 35667899999987642 222223345566678998775532 33 46777666665553222221
Q ss_pred CCCCCCCCcccCCChhHHHHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHhh----C-CCCeEEEEcCcH
Q 008112 445 GAMPPNLGQAFKNHMSEMFAYHATMMSNTLG--T-SIVVFTRTGFMAILLSHY----R-PSGTIFAFTNEK 507 (577)
Q Consensus 445 ~~~~~~l~~~~~~~~~~~ia~~a~~~a~~~~--a-aIiV~T~sG~tA~~is~~----R-P~~PIIAvT~~~ 507 (577)
.+ +.+ + .....-..-+.++.++++ . .||+.+-+|.++--++++ . |...||++.+..
T Consensus 170 ~~-~~n---~---~~~~G~~t~~~Ei~~ql~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~vigVe~~~ 233 (372)
T 1p5j_A 170 PP-FDD---P---LIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMETFG 233 (372)
T ss_dssp CS-SCC---H---HHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETT
T ss_pred CC-CCC---H---HHHhhHHHHHHHHHHHcCCCCCEEEEecCCchHHHHHHHHHHHhCCCCceEEEEecCC
Confidence 11 111 0 112222234456777764 4 899999999987666643 3 889999999863
No 264
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=45.69 E-value=1.1e+02 Score=30.24 Aligned_cols=96 Identities=13% Similarity=0.016 Sum_probs=58.1
Q ss_pred HHHHHHHhcCCCEEEE------cCCCCHHHHHHHHHHHHhcCCCceEEEeec---ChhhHhhHHHHHHh-cCEEEEcCCC
Q 008112 280 DDIKFGVDNKVDFYAV------SFVKDAQVVHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGD 349 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~------SfV~sa~dv~~lr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDGImIaRGD 349 (577)
+.+++-++.|+|+|.+ ++--|.++=.++.+...+.... ||+-+= |.++++.....-+. +|++|+-+-.
T Consensus 24 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--ViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 101 (288)
T 2nuw_A 24 THAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK--LIFQVGSLNLNDVMELVKFSNEMDILGVSSHSPY 101 (288)
T ss_dssp HHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC--EEEECCCSCHHHHHHHHHHHHTSCCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 3456778899999986 3445666666665555443333 888764 35666655555554 8999997554
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 350 Lg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
+.--.+.+.+...-+ ..|.+.+.|+++.
T Consensus 102 y~~~~s~~~l~~~f~---~va~a~~lPiilY 129 (288)
T 2nuw_A 102 YFPRLPEKFLAKYYE---EIARISSHSLYIY 129 (288)
T ss_dssp SSCSCCHHHHHHHHH---HHHHHCCSCEEEE
T ss_pred CCCCCCHHHHHHHHH---HHHHhcCCCEEEE
Confidence 422012223333333 4455668999875
No 265
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=45.63 E-value=94 Score=29.52 Aligned_cols=37 Identities=5% Similarity=-0.074 Sum_probs=27.0
Q ss_pred HHHHHHHhcCCCEEEEcC---CCCHHHHHHHHHHHHhcCCC
Q 008112 280 DDIKFGVDNKVDFYAVSF---VKDAQVVHELKNYLKSCGAD 317 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~Sf---V~sa~dv~~lr~~l~~~~~~ 317 (577)
+.++.+.+.|+|+|=+.. -.+. ++.++++.+++.|-.
T Consensus 27 ~~l~~a~~~G~~~vEl~~~~~~~~~-~~~~~~~~l~~~gl~ 66 (264)
T 1yx1_A 27 SFLPLLAMAGAQRVELREELFAGPP-DTEALTAAIQLQGLE 66 (264)
T ss_dssp GGHHHHHHHTCSEEEEEGGGCSSCC-CHHHHHHHHHHTTCE
T ss_pred HHHHHHHHcCCCEEEEEHHhcCCCH-HHHHHHHHHHHcCCE
Confidence 457788899999997752 2223 788999999887654
No 266
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=45.55 E-value=1.6e+02 Score=29.76 Aligned_cols=108 Identities=14% Similarity=0.147 Sum_probs=73.1
Q ss_pred hcCCCEEEEcCCCC--------------HHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEcCCCccC
Q 008112 287 DNKVDFYAVSFVKD--------------AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGA 352 (577)
Q Consensus 287 ~~gvD~I~~SfV~s--------------a~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIaRGDLg~ 352 (577)
+.+..+|+-++.+. .+-++.++++..+. .+.+++-+-..+.++- +.+.+|.+-||-+++
T Consensus 49 ~~~~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~L~~~~~e~--Glp~~Tev~d~~~v~~---l~~~vd~lqIgA~~~-- 121 (285)
T 3sz8_A 49 KLGIPFVFKASFDKANRSSIHSYRGVGLDEGLKIFAEVKARF--GVPVITDVHEAEQAAP---VAEIADVLQVPAFLA-- 121 (285)
T ss_dssp HHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHHHHHHHHH--CCCEEEECCSGGGHHH---HHTTCSEEEECGGGT--
T ss_pred hheeeeEEEeecccCCCCCCCCcCCcCHHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHH---HHHhCCEEEECcccc--
Confidence 34677777764442 46788888888664 4678887777666554 455699999995554
Q ss_pred CCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHH-hccceEEecccc
Q 008112 353 ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVR-EGADAVMLSGET 418 (577)
Q Consensus 353 elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~-~G~D~imLs~ET 418 (577)
...+ +++++.+.||||++.|.|. -|..|+..++..+. .|.+-++|..=+
T Consensus 122 ----~n~~-----LLr~va~~gkPVilK~G~~--------~t~~ei~~ave~i~~~Gn~~i~L~erg 171 (285)
T 3sz8_A 122 ----RQTD-----LVVAIAKAGKPVNVKKPQF--------MSPTQLKHVVSKCGEVGNDRVMLCERG 171 (285)
T ss_dssp ----TCHH-----HHHHHHHTSSCEEEECCTT--------SCGGGTHHHHHHHHHTTCCCEEEEECC
T ss_pred ----CCHH-----HHHHHHccCCcEEEeCCCC--------CCHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 2333 5556668999999977653 36677777777664 477777775333
No 267
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=45.52 E-value=2.3e+02 Score=28.49 Aligned_cols=59 Identities=8% Similarity=0.094 Sum_probs=40.9
Q ss_pred cCCc-eEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCC----CCHHHHH--------HHHHHHHHHHh
Q 008112 373 MGKA-VIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHG----KFPLKAV--------KVMHTVSLRTE 439 (577)
Q Consensus 373 aGKP-vi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G----~yP~eaV--------~~m~~I~~~aE 439 (577)
.+.| ++++-.. +...=...+..++..|++++..-.-+..- +-|.+++ +.|+.++++..
T Consensus 220 ~~~P~Vv~aGG~---------~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~~~~~~dp~~~~~~~~~~~~~~l~~iv~~~~ 290 (304)
T 1to3_A 220 INMPWVILSSGV---------DEKLFPRAVRVAMEAGASGFLAGRAVWSSVIGLPDTELMLRDVSAPKLQRLGEIVDEMM 290 (304)
T ss_dssp CCSCEEECCTTS---------CTTTHHHHHHHHHHTTCCEEEESHHHHGGGTTCSCHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEecCC---------CHHHHHHHHHHHHHcCCeEEEEehHHhCccccCCCHHHHHHhhchHHHHHHHHHHhcCC
Confidence 5889 7665432 22211244667788899999986666656 8899999 88888887755
Q ss_pred c
Q 008112 440 A 440 (577)
Q Consensus 440 ~ 440 (577)
.
T Consensus 291 ~ 291 (304)
T 1to3_A 291 G 291 (304)
T ss_dssp H
T ss_pred C
Confidence 3
No 268
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=45.24 E-value=1e+02 Score=33.19 Aligned_cols=127 Identities=18% Similarity=0.110 Sum_probs=74.5
Q ss_pred HHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhcccc
Q 008112 364 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATIT 443 (577)
Q Consensus 364 k~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~ 443 (577)
.-+..+|+..|.++++-- |.......+...-..|++.+....+... ..+..+++...+++.+....++
T Consensus 126 ~a~A~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~v~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~ 193 (527)
T 3pc3_A 126 IGLAMACAVKGYKCIIVM-----------PEKMSNEKVSALRTLGAKIIRTPTEAAY-DSPEGLIYVAQQLQRETPNSIV 193 (527)
T ss_dssp HHHHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECTTSCT-TSTTSHHHHHHHHHHHSSSEEC
T ss_pred HHHHHHHHHhCCeEEEEE-----------cCCCCHHHHHHHHHCCCEEEEeCCCCCc-ccHHHHHHHHHHHHHhCCCcEe
Confidence 345668889999987642 2222334455666789998877543211 1133455665666555433332
Q ss_pred CCCCCCCCCcccCCChhHHHHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHhh----CCCCeEEEEcCcHH
Q 008112 444 GGAMPPNLGQAFKNHMSEMFAYHATMMSNTLG--T-SIVVFTRTGFMAILLSHY----RPSGTIFAFTNEKR 508 (577)
Q Consensus 444 ~~~~~~~l~~~~~~~~~~~ia~~a~~~a~~~~--a-aIiV~T~sG~tA~~is~~----RP~~PIIAvT~~~~ 508 (577)
..+ |.+ +. .+.......+.++.++++ . .||+.+-+|.++--++++ .|.+.||++.+...
T Consensus 194 ~~~-~~n---~~--n~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~GG~~~G~~~~~k~~~p~~~vigve~~~~ 259 (527)
T 3pc3_A 194 LDQ-YRN---AG--NPLAHYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDPYGS 259 (527)
T ss_dssp CCT-TTC---TH--HHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTC
T ss_pred cCC-CCC---cc--hHHHHHHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCc
Confidence 221 111 00 011222234557777764 4 799999999887666654 79999999988654
No 269
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=45.17 E-value=1.1e+02 Score=30.80 Aligned_cols=124 Identities=16% Similarity=0.195 Sum_probs=74.3
Q ss_pred HHHHHHHhcCCCEEEEc---------CCC-----CHHHHHHHHHHHHhcCCCceEEEee--cChhhHhhHHHHHHh-cCE
Q 008112 280 DDIKFGVDNKVDFYAVS---------FVK-----DAQVVHELKNYLKSCGADIHVIVKI--ESADSIPNLHSIITA-SDG 342 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~S---------fV~-----sa~dv~~lr~~l~~~~~~i~IiaKI--Et~~gv~NldeIl~~-sDG 342 (577)
+..+..-+.|+|-|.+= |-. +.++++++++.+ ++++++|. -. ++..+.+.+. +|+
T Consensus 32 e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v-----~iPvl~k~~i~~---ide~qil~aaGAD~ 103 (297)
T 4adt_A 32 EQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCI-----SINVLAKVRIGH---FVEAQILEELKVDM 103 (297)
T ss_dssp HHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTC-----CSEEEEEEETTC---HHHHHHHHHTTCSE
T ss_pred HHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhc-----CCCEEEeccCCc---HHHHHHHHHcCCCE
Confidence 44456667899976544 322 788888887643 68999873 33 4444444444 899
Q ss_pred EEEcCCCccCCCCCCcHHHHHHHHHHHHHH--cCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCC
Q 008112 343 AMVARGDLGAELPIEEVPLLQEEIIRTCRS--MGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAH 420 (577)
Q Consensus 343 ImIaRGDLg~elg~e~v~~~qk~Ii~~c~~--aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~ 420 (577)
| |....+.+.+ ++..+++ .|.++++-.. +..| ...++..|+|.|-.++.--.
T Consensus 104 I-----d~s~~~~~~~-------li~~i~~~~~g~~vvv~v~-----------~~~E---a~~a~~~Gad~I~v~g~~gT 157 (297)
T 4adt_A 104 L-----DESEVLTMAD-------EYNHINKHKFKTPFVCGCT-----------NLGE---ALRRISEGASMIRTKGEAGT 157 (297)
T ss_dssp E-----EEETTSCCSC-------SSCCCCGGGCSSCEEEEES-----------SHHH---HHHHHHHTCSEEEECCCTTS
T ss_pred E-----EcCCCCCHHH-------HHHHHHhcCCCCeEEEEeC-----------CHHH---HHHHHhCCCCEEEECCCcCC
Confidence 8 3222222222 1222333 5777766332 3334 45677899999998876222
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 008112 421 GKFPLKAVKVMHTVSLRT 438 (577)
Q Consensus 421 G~yP~eaV~~m~~I~~~a 438 (577)
| .-.++|+++..+-.+.
T Consensus 158 G-~~~~~v~h~~~~~~ei 174 (297)
T 4adt_A 158 G-NIIEAIKHIRTVNNEI 174 (297)
T ss_dssp C-CCHHHHHHHHHHHHHH
T ss_pred C-chHHHHHHHHHhhhhh
Confidence 2 4589999998875433
No 270
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=44.99 E-value=1.8e+02 Score=29.46 Aligned_cols=119 Identities=17% Similarity=0.253 Sum_probs=72.6
Q ss_pred HHHHHHHhcCCCEEEEcCCCCH--HHHHHHHHHHHhcCCCceEEEe--e-cChhhHhhHHHHHHh-cCEEEEcCCCccCC
Q 008112 280 DDIKFGVDNKVDFYAVSFVKDA--QVVHELKNYLKSCGADIHVIVK--I-ESADSIPNLHSIITA-SDGAMVARGDLGAE 353 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV~sa--~dv~~lr~~l~~~~~~i~IiaK--I-Et~~gv~NldeIl~~-sDGImIaRGDLg~e 353 (577)
+||..+.+.|+|+|.+-+-+.- -|+..++++++.++. +.+.-. + +..+-.+.++.++.. .|.|+-.-+.-++
T Consensus 115 ~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~~-l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~~~~a- 192 (287)
T 3iwp_A 115 ADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICRP-LPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGCDSSA- 192 (287)
T ss_dssp HHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHTT-SCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTTSSST-
T ss_pred HHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcCC-CcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCCCh-
Confidence 5788899999999999985433 578888888876543 222211 0 112345677888875 9999987664443
Q ss_pred CCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHH-hccceEEeccc
Q 008112 354 LPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVR-EGADAVMLSGE 417 (577)
Q Consensus 354 lg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~-~G~D~imLs~E 417 (577)
.+.++.+++. ++. ..|+..|++---+ .+.. +...+. -|++.+.+|+-
T Consensus 193 --~~Gl~~Lk~L-v~~--a~~rI~ImaGGGV-------~~~N-----i~~l~~~tG~~~~H~S~~ 240 (287)
T 3iwp_A 193 --LEGLPLIKRL-IEQ--AKGRIVVMPGGGI-------TDRN-----LQRILEGSGATEFHCSAR 240 (287)
T ss_dssp --TTTHHHHHHH-HHH--HTTSSEEEECTTC-------CTTT-----HHHHHHHHCCSEEEECCE
T ss_pred --HHhHHHHHHH-HHH--hCCCCEEEECCCc-------CHHH-----HHHHHHhhCCCEEeECcC
Confidence 3455555443 332 3345556654333 2333 333333 79999999863
No 271
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=44.85 E-value=2.5e+02 Score=28.00 Aligned_cols=114 Identities=17% Similarity=0.047 Sum_probs=66.4
Q ss_pred CHHHHHHHHhcCCCEEE-EcCCCCHHHHHHHHHHHHhc-CC--CceEEEee--cChhhHhhHHHHHHh-cCEEEEcCCCc
Q 008112 278 DWDDIKFGVDNKVDFYA-VSFVKDAQVVHELKNYLKSC-GA--DIHVIVKI--ESADSIPNLHSIITA-SDGAMVARGDL 350 (577)
Q Consensus 278 D~~dI~~al~~gvD~I~-~SfV~sa~dv~~lr~~l~~~-~~--~i~IiaKI--Et~~gv~NldeIl~~-sDGImIaRGDL 350 (577)
+.++...+.+.|.-++. .....+++++.+..+.+.+. +. .+.++..- ..+.--+.++.+++. .|+|.++-|+
T Consensus 28 ~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~- 106 (328)
T 2gjl_A 28 RAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGND- 106 (328)
T ss_dssp SHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESC-
T ss_pred cHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCC-
Confidence 56666666777765444 44556688876554444432 21 23344320 023223445555555 8999987432
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEecccc
Q 008112 351 GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGET 418 (577)
Q Consensus 351 g~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ET 418 (577)
| .++++.++++|+|++... .+. .+...+...|+|++.+.+=+
T Consensus 107 ----p--------~~~~~~l~~~gi~vi~~v-----------~t~---~~a~~~~~~GaD~i~v~g~~ 148 (328)
T 2gjl_A 107 ----P--------GEHIAEFRRHGVKVIHKC-----------TAV---RHALKAERLGVDAVSIDGFE 148 (328)
T ss_dssp ----C--------HHHHHHHHHTTCEEEEEE-----------SSH---HHHHHHHHTTCSEEEEECTT
T ss_pred ----c--------HHHHHHHHHcCCCEEeeC-----------CCH---HHHHHHHHcCCCEEEEECCC
Confidence 2 356677888899988532 132 23456788999999996533
No 272
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=44.50 E-value=30 Score=35.89 Aligned_cols=65 Identities=15% Similarity=0.239 Sum_probs=39.5
Q ss_pred HHHHHHHHhcCCCEEEEcCCCC------HHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHH---h-cCEEEEcC
Q 008112 279 WDDIKFGVDNKVDFYAVSFVKD------AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT---A-SDGAMVAR 347 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~s------a~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~---~-sDGImIaR 347 (577)
.++++.+.+.|+|+|.++.--. ..++..+.+.....+.++.||+- -||.+-+++.+ . +|+++|||
T Consensus 236 ~e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~----GGI~~~~D~~k~l~~GAdaV~iGr 310 (370)
T 1gox_A 236 AEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLD----GGVRRGTDVFKALALGAAGVFIGR 310 (370)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEE----SSCCSHHHHHHHHHHTCSEEEECH
T ss_pred HHHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEE----CCCCCHHHHHHHHHcCCCEEeecH
Confidence 5788899999999999964211 12333333333333446778772 24444433333 3 99999997
No 273
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=44.30 E-value=1.8e+02 Score=29.50 Aligned_cols=106 Identities=9% Similarity=0.149 Sum_probs=71.8
Q ss_pred hcCCCEEEEcCCCC--------------HHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEcCCCccC
Q 008112 287 DNKVDFYAVSFVKD--------------AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGA 352 (577)
Q Consensus 287 ~~gvD~I~~SfV~s--------------a~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIaRGDLg~ 352 (577)
+.+..+|+-+..+. .+-++.++++..+. .+.+++-+-.++.++ .+.+.+|.+-||-+++
T Consensus 70 ~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~--GLpv~Tev~D~~~v~---~l~~~vd~lkIgA~~~-- 142 (298)
T 3fs2_A 70 KLGIGLVYKSSFDKANRTSLKAARGIGLEKALEVFSDLKKEY--GFPVLTDIHTEEQCA---AVAPVVDVLQIPAFLC-- 142 (298)
T ss_dssp HHTCCEEEECBCCCCC---------CCHHHHHHHHHHHHHHH--CCCEEEECCSHHHHH---HHTTTCSEEEECGGGT--
T ss_pred HcCCcEEEEcccccCCCCCCCCcCCcCHHHHHHHHHHHHHhc--CCeEEEEeCCHHHHH---HHHhhCCEEEECcccc--
Confidence 34677787765553 35677788877654 467888777766555 4445599999985544
Q ss_pred CCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHH-hccceEEecc
Q 008112 353 ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVR-EGADAVMLSG 416 (577)
Q Consensus 353 elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~-~G~D~imLs~ 416 (577)
...+ +++.+.+.||||++.|.|. -|..|+..++..+. .|.+-++|..
T Consensus 143 ----~n~~-----LLr~va~~gkPVilK~Gms--------~t~~ei~~ave~i~~~Gn~~iiL~e 190 (298)
T 3fs2_A 143 ----RQTD-----LLIAAARTGRVVNVKKGQF--------LAPWDMKNVLAKITESGNPNVLATE 190 (298)
T ss_dssp ----TCHH-----HHHHHHHTTSEEEEECCTT--------CCGGGHHHHHHHHHTTTCCCEEEEE
T ss_pred ----CCHH-----HHHHHHccCCcEEEeCCCC--------CCHHHHHHHHHHHHHcCCCeEEEEE
Confidence 3444 3445568899999977652 36678877777665 4777777753
No 274
>1vhk_A Hypothetical protein YQEU; structural genomics, unknown function; 2.60A {Bacillus subtilis} SCOP: b.122.1.2 c.116.1.5
Probab=44.25 E-value=64 Score=31.99 Aligned_cols=120 Identities=15% Similarity=0.178 Sum_probs=63.6
Q ss_pred ccCCCCEEEEeCC---eEEEEEEEEeCCeEEEEEeeCcEeccC--ceeeeCCCCCCCCCCCccCHHHHHHHHhcCCCEEE
Q 008112 220 DVEVGDMLLVDGG---MMSLLVKSKTEDSVKCEVVDGGELKSR--RHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYA 294 (577)
Q Consensus 220 ~v~~Gd~I~idDG---~i~l~V~~v~~~~v~~~v~~gG~l~s~--Kginlp~~~~~lp~ltekD~~dI~~al~~gvD~I~ 294 (577)
-+++||.|.+-|| ....+|.+++++.+.+++..--..... -.|.| ...+|. .++-...|+.+.+.|++-|.
T Consensus 36 Rl~~Gd~i~l~dg~G~~~~a~I~~~~~~~~~~~i~~~~~~~~e~~~~v~L---~~al~K-~~r~e~ilqkatELGV~~I~ 111 (268)
T 1vhk_A 36 RMNEGDQIICCSQDGFEAKCELQSVSKDKVSCLVIEWTNENRELPIKVYI---ASGLPK-GDKLEWIIQKGTELGAHAFI 111 (268)
T ss_dssp CCCTTCEEEEECTTSCEEEEEEEEECSSEEEEEEEEECCCCCCCSSEEEE---EEECCS-TTHHHHHHHHHHHTTCCEEE
T ss_pred cCCCCCEEEEEeCCCCEEEEEEEEecCCEEEEEEEEEeccCCCCCccEEE---EEeeec-CccHHHHHHHHHHhCcCEEE
Confidence 3588999997654 667888999999888877642111111 11111 112232 23444567889999999764
Q ss_pred EcCCC--C---------HHHHHHHHHHH----HhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEc
Q 008112 295 VSFVK--D---------AQVVHELKNYL----KSCGADIHVIVKIESADSIPNLHSIITASDGAMVA 346 (577)
Q Consensus 295 ~SfV~--s---------a~dv~~lr~~l----~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIa 346 (577)
|+.. + .......++++ ++.+. ..+.+|+.+..++.+-+-....|..++.
T Consensus 112 -p~~s~Rsv~~~~~~~~~kk~~Rw~~i~~eAaeQs~R--~~iP~v~~~~~~~~~l~~~~~~~~~lv~ 175 (268)
T 1vhk_A 112 -PFQAARSVVKLDDKKAKKKRERWTKIAKEAAEQSYR--NEVPRVMDVHSFQQLLQRMQDFDKCVVA 175 (268)
T ss_dssp -EECCTTCCCC---------HHHHHHHHHHHHHHTTC--SSCCEECCCBCHHHHHHHGGGSSEEEEE
T ss_pred -EEEeeeeeeecccchhhhHHHHHHHHHHHHHHHcCC--CCCcEEecCCCHHHHHhhCccCCeEEEE
Confidence 3322 2 11244555544 33333 3456666554444432222223555554
No 275
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=44.22 E-value=42 Score=33.49 Aligned_cols=97 Identities=16% Similarity=0.149 Sum_probs=57.6
Q ss_pred HHHHHHHhcCCCEEEE------cCCCCHHHHHHHHHH-HHhcCCCceEEEeecC---hhhHhhHHHHHHh-cCEEEEcCC
Q 008112 280 DDIKFGVDNKVDFYAV------SFVKDAQVVHELKNY-LKSCGADIHVIVKIES---ADSIPNLHSIITA-SDGAMVARG 348 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~------SfV~sa~dv~~lr~~-l~~~~~~i~IiaKIEt---~~gv~NldeIl~~-sDGImIaRG 348 (577)
+.+++-++.|+|+|.+ .+.-|.++=.++.+. .+..+.+++||+-+=+ .++++.....-+. +|++|+-+-
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (291)
T 3a5f_A 26 ELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITP 105 (291)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3456778899999976 334455555554444 4445667899998743 6666666555554 999998654
Q ss_pred CccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 349 DLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
.+.- .+.+.+...-+ ..|.+.+.|+++.
T Consensus 106 ~y~~-~s~~~l~~~f~---~ia~a~~lPiilY 133 (291)
T 3a5f_A 106 YYNK-TTQKGLVKHFK---AVSDAVSTPIIIY 133 (291)
T ss_dssp CSSC-CCHHHHHHHC----CTGGGCCSCEEEE
T ss_pred CCCC-CCHHHHHHHHH---HHHHhcCCCEEEE
Confidence 4321 12122222222 3345568998875
No 276
>4e8b_A Ribosomal RNA small subunit methyltransferase E; 16S rRNA methyltransferase; 2.25A {Escherichia coli}
Probab=44.08 E-value=64 Score=31.69 Aligned_cols=70 Identities=19% Similarity=0.251 Sum_probs=44.1
Q ss_pred cCCCCEEEEeCC---eEEEEEEEEeCCeEEEEEeeCcEeccC--ceeeeCCCCCCCCCCCccCHHHHHHHHhcCCCEEE
Q 008112 221 VEVGDMLLVDGG---MMSLLVKSKTEDSVKCEVVDGGELKSR--RHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYA 294 (577)
Q Consensus 221 v~~Gd~I~idDG---~i~l~V~~v~~~~v~~~v~~gG~l~s~--Kginlp~~~~~lp~ltekD~~dI~~al~~gvD~I~ 294 (577)
+++||.|.+-|| ....+|.+++++.+.+++...-..... ..+.+ ...+|. .++-...|+.+.+.|++-|.
T Consensus 34 ~~~Gd~v~l~dg~g~~~~a~I~~i~~~~~~~~i~~~~~~~~e~~~~v~L---~~al~K-~~r~e~ilqkatELGv~~I~ 108 (251)
T 4e8b_A 34 MGPGQALQLFDGSNQVFDAEITSASKKSVEVKVLEGQIDDRESPLHIHL---GQVMSR-GEKMEFTIQKSIELGVSLIT 108 (251)
T ss_dssp CCSCCEEEEECSSSEEEEEEEEEECSSCEEEEEEEEEECCCCCSSEEEE---EEECCS-SSHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCEEEEEeCCCcEEEEEEEEeecceEEEEEeeeecCCCCCCceEEE---EEEeec-hhHHHHHHHHHHhhCCCEEE
Confidence 588999988665 467889999999988887642222111 11221 011222 33444667889999999875
No 277
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=44.01 E-value=20 Score=36.82 Aligned_cols=58 Identities=24% Similarity=0.334 Sum_probs=35.1
Q ss_pred CCCHHHHHHHHHhCCcEEEEeccCCChH------HHHHHHHHHHHHHHhcCCCeeEEEeecCCC
Q 008112 120 TNTREMIWKLAEAGMNVARLNMSHGDHA------SHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (577)
Q Consensus 120 ~~~~e~l~~li~~Gm~v~RiN~sHg~~e------~~~~~i~~ir~~~~~~~~~~i~I~~Dl~Gp 177 (577)
..+.+.++.|.+.|+|++||-++..... ...+.++.++++.+.+..+-+.+++|+...
T Consensus 61 ~~~~~di~~i~~~G~n~vRipv~w~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vild~H~~ 124 (380)
T 1edg_A 61 KTTKQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDNKMYVILNTHHD 124 (380)
T ss_dssp CCCHHHHHHHHHHTCCEEEECCCCGGGEETTTTEECHHHHHHHHHHHHHHHTTTCEEEEECCSC
T ss_pred cccHHHHHHHHHcCCCEEEecccHHhhcCCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEeCCCc
Confidence 3578899999999999999988643211 001223333333222222447889998764
No 278
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=43.76 E-value=2.4e+02 Score=27.46 Aligned_cols=91 Identities=16% Similarity=0.181 Sum_probs=48.6
Q ss_pred HHHHHHHHhcCCCEEEE--cCCCC--------------------HHHHHHHHHHHHhcCCCceEEEee-cCh---hhHhh
Q 008112 279 WDDIKFGVDNKVDFYAV--SFVKD--------------------AQVVHELKNYLKSCGADIHVIVKI-ESA---DSIPN 332 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~--SfV~s--------------------a~dv~~lr~~l~~~~~~i~IiaKI-Et~---~gv~N 332 (577)
.+.++...+.|+|+|-+ ||..- .+..-++.+.+++.+.+++++... .++ -|+++
T Consensus 34 ~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~ 113 (268)
T 1qop_A 34 LKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFNNGIDA 113 (268)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHTTCHHH
T ss_pred HHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHHhhHHH
Confidence 44556666789998655 55321 122122223333333356676653 232 13333
Q ss_pred H-HHHHHh-cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEE
Q 008112 333 L-HSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIV 379 (577)
Q Consensus 333 l-deIl~~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ 379 (577)
+ ++..++ +||+++. |+. .++ .++.+..|+++|...+.
T Consensus 114 ~~~~~~~aGadgii~~--d~~----~e~----~~~~~~~~~~~g~~~i~ 152 (268)
T 1qop_A 114 FYARCEQVGVDSVLVA--DVP----VEE----SAPFRQAALRHNIAPIF 152 (268)
T ss_dssp HHHHHHHHTCCEEEET--TCC----GGG----CHHHHHHHHHTTCEEEC
T ss_pred HHHHHHHcCCCEEEEc--CCC----HHH----HHHHHHHHHHcCCcEEE
Confidence 3 333333 8999995 443 333 34567888999987654
No 279
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=43.63 E-value=2e+02 Score=28.43 Aligned_cols=121 Identities=11% Similarity=0.047 Sum_probs=72.6
Q ss_pred HHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhcc-cc
Q 008112 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEAT-IT 443 (577)
Q Consensus 365 ~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~-~~ 443 (577)
-+...|+..|.++++-. |....-..+...-..|++.+...++. .| .++.+...+++.+-... ++
T Consensus 76 a~A~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~v~~~~~~~---~~-~~~~~~a~~~~~~~~~~~~~ 140 (316)
T 1y7l_A 76 ALAYVAAARGYKITLTM-----------PETMSLERKRLLCGLGVNLVLTEGAK---GM-KGAIAKAEEIVASDPSRYVM 140 (316)
T ss_dssp HHHHHHHHHTCCEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTTEEC
T ss_pred HHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHcCCEEEEeCCCC---CH-HHHHHHHHHHHHhCCCCEEE
Confidence 46677889999987642 22222234556667899987765431 13 35776666665543322 22
Q ss_pred CCCCCCCCCcccCCCh-hHH-HHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHhh----C-CCCeEEEEcCcHH
Q 008112 444 GGAMPPNLGQAFKNHM-SEM-FAYHATMMSNTLG--T-SIVVFTRTGFMAILLSHY----R-PSGTIFAFTNEKR 508 (577)
Q Consensus 444 ~~~~~~~l~~~~~~~~-~~~-ia~~a~~~a~~~~--a-aIiV~T~sG~tA~~is~~----R-P~~PIIAvT~~~~ 508 (577)
..+ |.+ .. ... ...-+.++.++++ . .||+.+-+|.++--++++ . |...||++.+...
T Consensus 141 ~~~-~~n-------~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~~ 207 (316)
T 1y7l_A 141 LKQ-FEN-------PANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVES 207 (316)
T ss_dssp CCT-TTC-------THHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEEEETTS
T ss_pred CCC-CCC-------HHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccccHHHHHHHHHHhCCCCCEEEEEecCCC
Confidence 111 111 11 111 2223567777775 4 799999999998776653 4 9999999998653
No 280
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=43.62 E-value=1.6e+02 Score=27.68 Aligned_cols=89 Identities=4% Similarity=-0.050 Sum_probs=54.7
Q ss_pred HHHHHHHHhcCCCEEEEcCC-----CCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-----cCEEEEcCC
Q 008112 279 WDDIKFGVDNKVDFYAVSFV-----KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-----SDGAMVARG 348 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV-----~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-----sDGImIaRG 348 (577)
.+.++.+.+.|+|+|=+... .+++++.++++.+++.|-.+..+.-- ..+.++.+...++. ++.|.+.+|
T Consensus 33 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~-~~~~~~~~~~~i~~A~~lGa~~v~~~p~ 111 (257)
T 3lmz_A 33 DTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPI-YMKSEEEIDRAFDYAKRVGVKLIVGVPN 111 (257)
T ss_dssp HHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEE-EECSHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEecc-ccCCHHHHHHHHHHHHHhCCCEEEecCC
Confidence 34567888999999977643 37889999999999877654332211 01334444444432 556665443
Q ss_pred CccCCCCCCcHHHHHHHHHHHHHHcCCceEE
Q 008112 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIV 379 (577)
Q Consensus 349 DLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ 379 (577)
. ...+++...|+++|..+.+
T Consensus 112 -------~----~~l~~l~~~a~~~gv~l~l 131 (257)
T 3lmz_A 112 -------Y----ELLPYVDKKVKEYDFHYAI 131 (257)
T ss_dssp -------G----GGHHHHHHHHHHHTCEEEE
T ss_pred -------H----HHHHHHHHHHHHcCCEEEE
Confidence 1 2335677777777776553
No 281
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=43.56 E-value=1.4e+02 Score=29.73 Aligned_cols=142 Identities=17% Similarity=0.195 Sum_probs=87.1
Q ss_pred CHHHHHHHHhcC-CCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEee----cChhhHhhHHHHHHh-----cCEEEEcC
Q 008112 278 DWDDIKFGVDNK-VDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKI----ESADSIPNLHSIITA-----SDGAMVAR 347 (577)
Q Consensus 278 D~~dI~~al~~g-vD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKI----Et~~gv~NldeIl~~-----sDGImIaR 347 (577)
-.+.++.+++.| +|+|=+-.-...+.+.++.+..... +++||+-- .|+. .+.+.+++.. +|.+=|+.
T Consensus 121 ~~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~--~~kvI~S~Hdf~~tP~-~~el~~~~~~~~~~GaDIvKia~ 197 (276)
T 3o1n_A 121 YIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQH--NVAVIMSNHDFHKTPA-AEEIVQRLRKMQELGADIPKIAV 197 (276)
T ss_dssp HHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHT--TCEEEEEEEESSCCCC-HHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhC--CCEEEEEeecCCCCcC-HHHHHHHHHHHHHcCCCEEEEEe
Confidence 355667889999 9999998766667777777665443 45666632 2442 3444444432 68777751
Q ss_pred CCccCCCCCCcHHHHHHHHHHHHHH-cCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceE--EeccccCCCCCH
Q 008112 348 GDLGAELPIEEVPLLQEEIIRTCRS-MGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAV--MLSGETAHGKFP 424 (577)
Q Consensus 348 GDLg~elg~e~v~~~qk~Ii~~c~~-aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~i--mLs~ETa~G~yP 424 (577)
+.-..+++..+.+-.-..... .++|+|.- +|=.....|| +.+.+. |+-.. .+...+|=|..+
T Consensus 198 ----~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~-----~MG~~G~~SR-----i~~~~~-GS~vTf~~l~~~sAPGQl~ 262 (276)
T 3o1n_A 198 ----MPQTKADVLTLLTATVEMQERYADRPIITM-----SMSKTGVISR-----LAGEVF-GSAATFGAVKKASAPGAIS 262 (276)
T ss_dssp ----CCSSHHHHHHHHHHHHHHHHHTCCSCCEEE-----ECSGGGTHHH-----HCHHHH-TCCEEECBSSCCSSTTCCB
T ss_pred ----cCCChHHHHHHHHHHHHHHhcCCCCCEEEE-----ECCCchhhHH-----HHHHHh-CCceEecCCCCCCCCCCCC
Confidence 112233555555544333333 67898752 4555555566 777665 43333 356789999999
Q ss_pred HHHHHHHHHHHHH
Q 008112 425 LKAVKVMHTVSLR 437 (577)
Q Consensus 425 ~eaV~~m~~I~~~ 437 (577)
++-++.+-++...
T Consensus 263 ~~~l~~~l~~l~~ 275 (276)
T 3o1n_A 263 VADLRTVLTILHQ 275 (276)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc
Confidence 9988877766654
No 282
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=43.23 E-value=37 Score=34.98 Aligned_cols=55 Identities=15% Similarity=0.276 Sum_probs=35.2
Q ss_pred CCCHHHHHHHHHhCCcEEEEeccCCC-------h-HHHHHHHHHHHHHHHhcCCCeeEEEeecCCC
Q 008112 120 TNTREMIWKLAEAGMNVARLNMSHGD-------H-ASHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (577)
Q Consensus 120 ~~~~e~l~~li~~Gm~v~RiN~sHg~-------~-e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~Gp 177 (577)
..+.+.++.|.+.|+|++||-++... . +...+.++.+=+...+.| +-+++|+-.-
T Consensus 52 ~~t~~di~~ik~~G~N~vRipi~w~~~~~~~g~~d~~~l~~ld~vVd~a~~~G---i~vIldlH~~ 114 (353)
T 3l55_A 52 ETTQDMMTFLMQNGFNAVRIPVTWYEHMDAEGNVDEAWMMRVKAIVEYAMNAG---LYAIVNVHHD 114 (353)
T ss_dssp CCCHHHHHHHHHTTEEEEEECCCCGGGBCTTCCBCHHHHHHHHHHHHHHHHHT---CEEEEECCTT
T ss_pred CCCHHHHHHHHHcCCCEEEEcccHHHhcCCCCCcCHHHHHHHHHHHHHHHHCC---CEEEEECCCC
Confidence 34789999999999999999987432 1 222233333223333444 7888998754
No 283
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=43.21 E-value=72 Score=33.07 Aligned_cols=95 Identities=17% Similarity=0.149 Sum_probs=51.7
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcC-CCccCCCCCCcHHHHHHHHHHHHHHcCCce
Q 008112 300 DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVAR-GDLGAELPIEEVPLLQEEIIRTCRSMGKAV 377 (577)
Q Consensus 300 sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaR-GDLg~elg~e~v~~~qk~Ii~~c~~aGKPv 377 (577)
+.++++++++.. +.+++.|.= ...+......+. +|+|.|.- |-=....+...+ ..-.++.+++ ...+|+
T Consensus 217 ~~~~i~~lr~~~-----~~PvivK~v--~~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~-~~l~~v~~~v-~~~ipV 287 (368)
T 2nli_A 217 SPRDIEEIAGHS-----GLPVFVKGI--QHPEDADMAIKRGASGIWVSNHGARQLYEAPGSF-DTLPAIAERV-NKRVPI 287 (368)
T ss_dssp CHHHHHHHHHHS-----SSCEEEEEE--CSHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHH-HHHHHHHHHH-TTSSCE
T ss_pred hHHHHHHHHHHc-----CCCEEEEcC--CCHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChH-HHHHHHHHHh-CCCCeE
Confidence 456777777643 467777721 223333333444 89998841 100011222222 2222222222 125898
Q ss_pred EEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 378 IVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 378 i~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
|....+- .-.|+..++..|+|++|+.
T Consensus 288 ia~GGI~------------~g~D~~kalalGAd~V~iG 313 (368)
T 2nli_A 288 VFDSGVR------------RGEHVAKALASGADVVALG 313 (368)
T ss_dssp EECSSCC------------SHHHHHHHHHTTCSEEEEC
T ss_pred EEECCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 8754432 2467999999999999986
No 284
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=43.08 E-value=1.3e+02 Score=30.03 Aligned_cols=148 Identities=16% Similarity=0.149 Sum_probs=74.2
Q ss_pred cCEEEEcCCCc--cCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHH-HHHHhccceEEecc
Q 008112 340 SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIA-IAVREGADAVMLSG 416 (577)
Q Consensus 340 sDGImIaRGDL--g~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~-nav~~G~D~imLs~ 416 (577)
+||+++. |-- +..+..++-..+-+..++.++.+..|||.-|. ..+-+|..+.+ .|-..|+|++|+..
T Consensus 42 v~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg---------~~~t~~ai~la~~a~~~Gadavlv~~ 111 (301)
T 3m5v_A 42 IDAVVPV-GTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAG---------SNATHEAVGLAKFAKEHGADGILSVA 111 (301)
T ss_dssp CCEEECS-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECC---------CSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCC---------CCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 8999884 111 12223333333333333333322578887543 33444555544 47778999999964
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHhccccCCCCCCCCCcccCCChhHHHHHHHHHHHhhcCceEEE-EcCCh---HHHHHHH
Q 008112 417 ETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSIVV-FTRTG---FMAILLS 492 (577)
Q Consensus 417 ETa~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~l~~~~~~~~~~~ia~~a~~~a~~~~aaIiV-~T~sG---~tA~~is 492 (577)
=--...-+.+.++....|+..+.--+. +|+.-......-..+.+ .++++....-+-+ .| +| +..+.+.
T Consensus 112 P~y~~~s~~~l~~~f~~va~a~~lPii---lYn~P~~tg~~l~~~~~----~~La~~~pnivgiKds-sgd~~~~~~~~~ 183 (301)
T 3m5v_A 112 PYYNKPTQQGLYEHYKAIAQSVDIPVL---LYNVPGRTGCEISTDTI----IKLFRDCENIYGVKEA-SGNIDKCVDLLA 183 (301)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCSSCEE---EEECHHHHSCCCCHHHH----HHHHHHCTTEEEEEEC-SSCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCEE---EEeCchhhCcCCCHHHH----HHHHhcCCCEEEEEeC-CCCHHHHHHHHH
Confidence 332333356788888899888753221 11100000011123333 3455441321112 33 33 4566666
Q ss_pred hhCCCCeEEEEcCc
Q 008112 493 HYRPSGTIFAFTNE 506 (577)
Q Consensus 493 ~~RP~~PIIAvT~~ 506 (577)
.. |+..|+.-..+
T Consensus 184 ~~-~~f~v~~G~d~ 196 (301)
T 3m5v_A 184 HE-PRMMLISGEDA 196 (301)
T ss_dssp HC-TTSEEEECCGG
T ss_pred hC-CCeEEEEccHH
Confidence 66 88888766543
No 285
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=43.04 E-value=40 Score=35.04 Aligned_cols=67 Identities=13% Similarity=0.181 Sum_probs=41.4
Q ss_pred HHHHHHHHhcCCCEEEEcCCC------CHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh----cCEEEEcCC
Q 008112 279 WDDIKFGVDNKVDFYAVSFVK------DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA----SDGAMVARG 348 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~------sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~----sDGImIaRG 348 (577)
.++.+.+.+.|+|+|.++.-- .+..+..+.+.....+.++.||+- -||.+-.++++. +|+++|||.
T Consensus 228 ~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~----GGI~~g~Dv~kaLalGA~aV~iGr~ 303 (352)
T 3sgz_A 228 KEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMD----GGVRTGTDVLKALALGARCIFLGRP 303 (352)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEE----SSCCSHHHHHHHHHTTCSEEEESHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEE----CCCCCHHHHHHHHHcCCCEEEECHH
Confidence 577888899999999985421 112333333333333456888873 344455555544 999999985
Q ss_pred C
Q 008112 349 D 349 (577)
Q Consensus 349 D 349 (577)
=
T Consensus 304 ~ 304 (352)
T 3sgz_A 304 I 304 (352)
T ss_dssp H
T ss_pred H
Confidence 3
No 286
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=42.92 E-value=1.3e+02 Score=29.89 Aligned_cols=96 Identities=9% Similarity=-0.033 Sum_probs=57.1
Q ss_pred HHHHHHHhcCCCEEEE------cCCCCHHHHHHHHHHHHhcCCCceEEEeecC---hhhHhhHHHHHHh-cCEEEEcCCC
Q 008112 280 DDIKFGVDNKVDFYAV------SFVKDAQVVHELKNYLKSCGADIHVIVKIES---ADSIPNLHSIITA-SDGAMVARGD 349 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~------SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt---~~gv~NldeIl~~-sDGImIaRGD 349 (577)
+.+++-++.|+|+|.+ ++--|.++=.++.+...+.... ||+-+=+ .++++.....-+. +|++|+-+-.
T Consensus 24 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g--viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 101 (293)
T 1w3i_A 24 IHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK--IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAPY 101 (293)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC--EEEECCCSCHHHHHHHHHHGGGSCCSEEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC--EEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 4456778899999986 3445666666666655444333 8887643 5555555544444 8999987544
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 350 Lg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
+.-..+.+.+...-+. .|.+.+.|+++.
T Consensus 102 y~~~~s~~~l~~~f~~---va~a~~lPiilY 129 (293)
T 1w3i_A 102 YYPRMSEKHLVKYFKT---LCEVSPHPVYLY 129 (293)
T ss_dssp SCSSCCHHHHHHHHHH---HHHHCSSCEEEE
T ss_pred CCCCCCHHHHHHHHHH---HHhhCCCCEEEE
Confidence 4220122333333344 455668999875
No 287
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=42.64 E-value=43 Score=33.70 Aligned_cols=96 Identities=8% Similarity=0.021 Sum_probs=58.5
Q ss_pred HHHHHHhcCCCEEEEc------CCCCHHHHHHHHH-HHHhcCCCceEEEee---cChhhHhhHHHHHHh-cCEEEEcCCC
Q 008112 281 DIKFGVDNKVDFYAVS------FVKDAQVVHELKN-YLKSCGADIHVIVKI---ESADSIPNLHSIITA-SDGAMVARGD 349 (577)
Q Consensus 281 dI~~al~~gvD~I~~S------fV~sa~dv~~lr~-~l~~~~~~i~IiaKI---Et~~gv~NldeIl~~-sDGImIaRGD 349 (577)
.+++-++.|+|+|++. +--|.++=.++.+ ..+..+.+++||+-+ -|.++++......+. +|++|+-+-.
T Consensus 30 lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 109 (300)
T 3eb2_A 30 LCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEA 109 (300)
T ss_dssp HHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred HHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 3467788999998642 2234444444433 344456778888865 456777766666655 9999987544
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 350 Lg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
+.- .+.+.+. +..-..|.+.+.|+++.
T Consensus 110 y~~-~~~~~l~---~~f~~va~a~~lPiilY 136 (300)
T 3eb2_A 110 YFP-LKDAQIE---SYFRAIADAVEIPVVIY 136 (300)
T ss_dssp SSC-CCHHHHH---HHHHHHHHHCSSCEEEE
T ss_pred CCC-CCHHHHH---HHHHHHHHHCCCCEEEE
Confidence 322 1222333 34444455668999975
No 288
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=42.50 E-value=1.5e+02 Score=29.51 Aligned_cols=119 Identities=18% Similarity=0.114 Sum_probs=72.8
Q ss_pred HHHHhcCCCEEEE-----cCCCCHHHHHHHHHHHHhcCCCceEEEeecChh-----------hHhhHHHHHHh--cCEEE
Q 008112 283 KFGVDNKVDFYAV-----SFVKDAQVVHELKNYLKSCGADIHVIVKIESAD-----------SIPNLHSIITA--SDGAM 344 (577)
Q Consensus 283 ~~al~~gvD~I~~-----SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~-----------gv~NldeIl~~--sDGIm 344 (577)
+.+...|+|.|=+ ......+++.++...+.+.-.+++||.-+-+.. -++=+...++. +|.|=
T Consensus 59 ~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~ll~~~l~~g~~dyID 138 (276)
T 3o1n_A 59 LAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMID 138 (276)
T ss_dssp HHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBCCCHHHHHHHHHHHHHHTCCSEEE
T ss_pred HHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCCCCHHHHHHHHHHHHhcCCCCEEE
Confidence 3344578887633 333445666666666655444677888766531 12222333332 45554
Q ss_pred EcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhccceEEec
Q 008112 345 VARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLS 415 (577)
Q Consensus 345 IaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~D~imLs 415 (577)
| |+... ....++++..+++.|..+|..-+-++ .+|+..|+...++ +...|+|.+=+.
T Consensus 139 v-------El~~~--~~~~~~l~~~a~~~~~kvI~S~Hdf~-----~tP~~~el~~~~~~~~~~GaDIvKia 196 (276)
T 3o1n_A 139 L-------ELFTG--DDEVKATVGYAHQHNVAVIMSNHDFH-----KTPAAEEIVQRLRKMQELGADIPKIA 196 (276)
T ss_dssp E-------EGGGC--HHHHHHHHHHHHHTTCEEEEEEEESS-----CCCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred E-------ECcCC--HHHHHHHHHHHHhCCCEEEEEeecCC-----CCcCHHHHHHHHHHHHHcCCCEEEEE
Confidence 3 33221 35778899999999999999876554 4788888877665 556789987663
No 289
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=42.42 E-value=2e+02 Score=28.04 Aligned_cols=104 Identities=17% Similarity=0.187 Sum_probs=64.4
Q ss_pred CEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhh----HhhHHHHHHhcCEEEEcCCCccCCCCCCcHHHHHHHH
Q 008112 291 DFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADS----IPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEI 366 (577)
Q Consensus 291 D~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~g----v~NldeIl~~sDGImIaRGDLg~elg~e~v~~~qk~I 366 (577)
..++.|| +.+.+..+++. ..++.+...++.... -..+..+...++++-... ..+-...
T Consensus 172 ~vii~SF--~~~~l~~~~~~----~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~------------~~~~~~~ 233 (287)
T 2oog_A 172 HVMIQSF--SDESLKKIHRQ----NKHVPLVKLVDKGELQQFNDQRLKEIRSYAIGLGPDY------------TDLTEQN 233 (287)
T ss_dssp SEEEEES--CHHHHHHHHHH----CTTSCEEEEECTTTGGGCCHHHHHHHHTTCSEEEEBG------------GGCCHHH
T ss_pred CEEEEeC--CHHHHHHHHHh----CCCCcEEEEecCCcccccCHHHHHHHhhhheEEcccH------------hhcCHHH
Confidence 4677888 67777777654 355555555543221 123344443456654321 1123578
Q ss_pred HHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHH
Q 008112 367 IRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 432 (577)
Q Consensus 367 i~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~ 432 (577)
++.++++|++|.+-|- -+-.++..++..|+|+|+- .||..+.+++.
T Consensus 234 v~~~~~~G~~v~~wTv-------------n~~~~~~~l~~~GVdgIiT-------D~P~~~~~~~~ 279 (287)
T 2oog_A 234 THHLKDLGFIVHPYTV-------------NEKADMLRLNKYGVDGVFT-------NFADKYKEVIK 279 (287)
T ss_dssp HHHHHHTTCEECCBCC-------------CSHHHHHHHHHHTCSEEEE-------SCHHHHHHHHH
T ss_pred HHHHHHCCCeEEEEeC-------------CCHHHHHHHHHcCCCEEEe-------CCHHHHHHHHh
Confidence 8999999999997662 1234566788899999975 68987766553
No 290
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=42.17 E-value=3.5e+02 Score=29.37 Aligned_cols=118 Identities=12% Similarity=0.018 Sum_probs=71.0
Q ss_pred HHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhccccC
Q 008112 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (577)
Q Consensus 365 ~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~~ 444 (577)
-+..+|+..|.++.+-. |...-...+...-..|++.+... ...-++.+...+++.+-...+.
T Consensus 93 avA~aa~~lGi~~~Ivm-----------P~~~p~~Kv~~~r~~GAeVvlv~------~~~dda~~~a~ela~e~g~~~v- 154 (514)
T 1tdj_A 93 GVAFSSARLGVKALIVM-----------PTATADIKVDAVRGFGGEVLLHG------ANFDEAKAKAIELSQQQGFTWV- 154 (514)
T ss_dssp HHHHHHHHTTCCEEEEC-----------CSSCCHHHHHHHHHHSCEEECCC------SSHHHHHHHHHHHHHHHCCEEC-
T ss_pred HHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHCCCEEEEEC------CCHHHHHHHHHHHHHhcCCEee-
Confidence 35667889999987632 22222234556667899866532 2345777776666655332211
Q ss_pred CCCCCCCCcccCCChhHHHHHHHHHHHhhcC-c-eEEEEcCChHHHHHHHh----hCCCCeEEEEcCcH
Q 008112 445 GAMPPNLGQAFKNHMSEMFAYHATMMSNTLG-T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTNEK 507 (577)
Q Consensus 445 ~~~~~~l~~~~~~~~~~~ia~~a~~~a~~~~-a-aIiV~T~sG~tA~~is~----~RP~~PIIAvT~~~ 507 (577)
. .|.+ + .....-..-+.++.++++ . .|+|.+-+|.++--+++ .+|...||++.+..
T Consensus 155 ~-pfdn---p---~~iaGqgTig~EI~eQl~~~D~vvvpvGgGGliaGia~~lk~~~P~~kVIgVep~~ 216 (514)
T 1tdj_A 155 P-PFDH---P---MVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAED 216 (514)
T ss_dssp C-SSCC---H---HHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETT
T ss_pred C-CCCC---H---HHHHHHHHHHHHHHHHCCCCCEEEEccCcHHHHHHHHHHHHHhCCCCEEEEEeccC
Confidence 1 1111 0 111222223567777775 4 89999999998766665 47999999999853
No 291
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=42.06 E-value=2.3e+02 Score=26.89 Aligned_cols=100 Identities=14% Similarity=0.178 Sum_probs=60.2
Q ss_pred HHHHHHHhcCCCEEEEcCCC----CHHHHHHHHHHHHhcCCCceEEEe------ecC----------------hhhHhhH
Q 008112 280 DDIKFGVDNKVDFYAVSFVK----DAQVVHELKNYLKSCGADIHVIVK------IES----------------ADSIPNL 333 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV~----sa~dv~~lr~~l~~~~~~i~IiaK------IEt----------------~~gv~Nl 333 (577)
+.++.+.+.|+|+|=+..-. +.+++.++++.+.+.|-.+..+.- .-+ .++++.+
T Consensus 25 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 104 (290)
T 3tva_A 25 VHLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEM 104 (290)
T ss_dssp BCHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHH
Confidence 45777889999999887643 478899999999887765444421 000 2344555
Q ss_pred HHHHHh-----cCEEEEcCCCccCC--CCCCcHHHHHHHHHHHHHHcCCceEE
Q 008112 334 HSIITA-----SDGAMVARGDLGAE--LPIEEVPLLQEEIIRTCRSMGKAVIV 379 (577)
Q Consensus 334 deIl~~-----sDGImIaRGDLg~e--lg~e~v~~~qk~Ii~~c~~aGKPvi~ 379 (577)
...++. ++.|.+..|...-. -.++.+....+++...|+++|..+.+
T Consensus 105 ~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 157 (290)
T 3tva_A 105 KEISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHL 157 (290)
T ss_dssp HHHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 555543 56777655532211 11123444456677777777776654
No 292
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=41.87 E-value=67 Score=32.49 Aligned_cols=97 Identities=11% Similarity=0.051 Sum_probs=59.4
Q ss_pred HHHHHHHhcCCCEEEEcC------CCCHHHHHHHHH-HHHhcCCCceEEEeec---ChhhHhhHHHHHHh-c-CEEEEcC
Q 008112 280 DDIKFGVDNKVDFYAVSF------VKDAQVVHELKN-YLKSCGADIHVIVKIE---SADSIPNLHSIITA-S-DGAMVAR 347 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~Sf------V~sa~dv~~lr~-~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-s-DGImIaR 347 (577)
+.+++-++.|+|+|.+.= --|.++=.++.+ ..+..+.+++||+-+= |.++++.....-+. . |++|+-+
T Consensus 32 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~ 111 (311)
T 3h5d_A 32 ALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIV 111 (311)
T ss_dssp HHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcC
Confidence 456788899999987642 234444444444 4455567899999863 55666666666654 4 9999875
Q ss_pred CCccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 348 GDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 348 GDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
-.+.- ...+. +.+..-..|.+.+.|+++.
T Consensus 112 P~y~~-~s~~~---l~~~f~~va~a~~lPiilY 140 (311)
T 3h5d_A 112 PYYNK-PSQEG---MYQHFKAIADASDLPIIIY 140 (311)
T ss_dssp CCSSC-CCHHH---HHHHHHHHHHSCSSCEEEE
T ss_pred CCCCC-CCHHH---HHHHHHHHHHhCCCCEEEE
Confidence 44322 12223 3334444455569999975
No 293
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=41.74 E-value=2.4e+02 Score=28.40 Aligned_cols=108 Identities=17% Similarity=0.188 Sum_probs=71.4
Q ss_pred hcCCCEEEEcCCCC--------------HHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEcCCCccC
Q 008112 287 DNKVDFYAVSFVKD--------------AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGA 352 (577)
Q Consensus 287 ~~gvD~I~~SfV~s--------------a~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIaRGDLg~ 352 (577)
+.|+.+|+-+..+. .+-++.++++..+. .+.+++-+-.++.++-+.+ .+|.+-||-+++
T Consensus 46 ~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~--Glp~~tev~d~~~v~~l~~---~vd~lkIgA~~~-- 118 (288)
T 3tml_A 46 KLNVPFIYKSSYDKANRSSGKSFRGLGMDEGLRILSEVKRQL--GLPVLTDVHSIDEIEQVAS---VVDVLQTPAFLC-- 118 (288)
T ss_dssp HHTCCEEEECBC--------------CHHHHHHHHHHHHHHH--CCCEEEECCSGGGHHHHHH---HCSEEEECGGGT--
T ss_pred HcCCCEEEecccccCCCCCCCCcCCcCHHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHHHH---hCCEEEECcccc--
Confidence 45888888754442 35677777777654 4678888877776665544 499999995543
Q ss_pred CCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHH-hcc------ceEEecccc
Q 008112 353 ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVR-EGA------DAVMLSGET 418 (577)
Q Consensus 353 elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~-~G~------D~imLs~ET 418 (577)
...+ +++.+.+.||||++.|.|. -|..|+..++..+. .|. +-|+|..=+
T Consensus 119 ----~n~~-----LLr~~a~~gkPVilK~G~~--------~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg 174 (288)
T 3tml_A 119 ----RQTD-----FIHACARSGKPVNIKKGQF--------LAPHDMKNVIDKARDAAREAGLSEDRFMACERG 174 (288)
T ss_dssp ----TCHH-----HHHHHHTSSSCEEEECCTT--------CCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECC
T ss_pred ----cCHH-----HHHHHHccCCcEEEeCCCC--------CCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCC
Confidence 2343 3445668999999977653 26677777777665 465 557775333
No 294
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=41.73 E-value=3.3e+02 Score=28.47 Aligned_cols=138 Identities=19% Similarity=0.218 Sum_probs=89.1
Q ss_pred HHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEee-cCh-hhHhhHHHHHHh-cCEEEEcCCCccCCCCC
Q 008112 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKI-ESA-DSIPNLHSIITA-SDGAMVARGDLGAELPI 356 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKI-Et~-~gv~NldeIl~~-sDGImIaRGDLg~elg~ 356 (577)
+.|+.-.+.|+|.|-++. .+.++.+.++.+-+. .+++++|-| -++ .++. . ++. +|.+=|.||.+|-
T Consensus 50 ~Qi~~l~~aG~diVRvav-p~~~~a~al~~I~~~--~~vPlvaDiHf~~~lal~---a-~e~G~dklRINPGNig~---- 118 (366)
T 3noy_A 50 NQIKRLYEAGCEIVRVAV-PHKEDVEALEEIVKK--SPMPVIADIHFAPSYAFL---S-MEKGVHGIRINPGNIGK---- 118 (366)
T ss_dssp HHHHHHHHTTCCEEEEEC-CSHHHHHHHHHHHHH--CSSCEEEECCSCHHHHHH---H-HHTTCSEEEECHHHHSC----
T ss_pred HHHHHHHHcCCCEEEeCC-CChHHHHHHHHHHhc--CCCCEEEeCCCCHHHHHH---H-HHhCCCeEEECCcccCc----
Confidence 334555689999998875 457777777665544 468999987 332 2222 2 334 9999999999973
Q ss_pred CcHHHHHHHHHHHHHHcCCceEEE-------ehhhHhhhcCCCCChHhH-----HHHHHHHHhccceEEeccccCCCCCH
Q 008112 357 EEVPLLQEEIIRTCRSMGKAVIVA-------TNMLESMIVHPTPTRAEV-----SDIAIAVREGADAVMLSGETAHGKFP 424 (577)
Q Consensus 357 e~v~~~qk~Ii~~c~~aGKPvi~A-------Tq~LeSM~~~~~PtrAEv-----~Dv~nav~~G~D~imLs~ETa~G~yP 424 (577)
..--++++++|+++|+|+=+- ..+|+.+ ..||...+ .-+.-+-..|+|-+.+|--. .-+
T Consensus 119 ---~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~y---g~~~~eamVeSAl~~~~~~e~~gf~~iviS~K~---S~v 189 (366)
T 3noy_A 119 ---EEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKY---GYPSAEALAESALRWSEKFEKWGFTNYKVSIKG---SDV 189 (366)
T ss_dssp ---HHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHH---SSCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEC---SSH
T ss_pred ---hhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHhCCCCeEEEeeec---CCh
Confidence 223467999999999997542 4444433 22443332 12333566799999998443 456
Q ss_pred HHHHHHHHHHHHH
Q 008112 425 LKAVKVMHTVSLR 437 (577)
Q Consensus 425 ~eaV~~m~~I~~~ 437 (577)
...|+.-+.+.++
T Consensus 190 ~~~i~ayr~la~~ 202 (366)
T 3noy_A 190 LQNVRANLIFAER 202 (366)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 6777766666655
No 295
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=41.66 E-value=1.4e+02 Score=28.82 Aligned_cols=124 Identities=16% Similarity=0.135 Sum_probs=71.7
Q ss_pred HHHHHHHhcCCCEEE--EcCCC--CHHHHHHHHHHHHhcCCCceEEEeecChh-----------hHhhHHHHHHh--cCE
Q 008112 280 DDIKFGVDNKVDFYA--VSFVK--DAQVVHELKNYLKSCGADIHVIVKIESAD-----------SIPNLHSIITA--SDG 342 (577)
Q Consensus 280 ~dI~~al~~gvD~I~--~SfV~--sa~dv~~lr~~l~~~~~~i~IiaKIEt~~-----------gv~NldeIl~~--sDG 342 (577)
+.++.+.+.|+|.|= +=|-+ +.+++.+....+...-.++++|.-+-+.. -++=+...++. +|.
T Consensus 21 ~~~~~~~~~~~D~vElRvD~l~~~~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~~~~d~ 100 (238)
T 1sfl_A 21 IQKINHRIDAIDVLELRIDQFENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDSYLNLISDLANINGIDM 100 (238)
T ss_dssp HHHHHHTTTTCSEEEEECTTSTTCCHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCCHHHHHHHHHHGGGCTTCCE
T ss_pred HHHHHhhhcCCCEEEEEecccccCCHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCCCCHHHHHHHHHHHHHhCCCCE
Confidence 334555567777752 22221 45666655555543323578888775442 11122333321 444
Q ss_pred EEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhccceEEec
Q 008112 343 AMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLS 415 (577)
Q Consensus 343 ImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~D~imLs 415 (577)
|=| |+....-....+++++.+++.|..+|..-+-++ .+|+..|+...++ +...|+|.+=+.
T Consensus 101 iDv-------El~~~~~~~~~~~l~~~~~~~~~kvI~S~Hdf~-----~tp~~~el~~~~~~~~~~gaDivKia 162 (238)
T 1sfl_A 101 IDI-------EWQADIDIEKHQRIITHLQQYNKEVIISHHNFE-----STPPLDELQFIFFKMQKFNPEYVKLA 162 (238)
T ss_dssp EEE-------ECCTTSCHHHHHHHHHHHHHTTCEEEEEEEESS-----CCCCHHHHHHHHHHHHTTCCSEEEEE
T ss_pred EEE-------EccCCCChHHHHHHHHHHHhcCCEEEEEecCCC-----CCcCHHHHHHHHHHHHHcCCCEEEEE
Confidence 433 443211235567888999999999999877554 4788888877666 666899987664
No 296
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=41.50 E-value=48 Score=32.47 Aligned_cols=147 Identities=17% Similarity=0.134 Sum_probs=87.0
Q ss_pred CCCCccCHHHH-HHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh--------cCE
Q 008112 272 PSITEKDWDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--------SDG 342 (577)
Q Consensus 272 p~ltekD~~dI-~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~--------sDG 342 (577)
|.-|+.|.+.+ +.+.+.|++.|+++ +..+..++ .+ .+.++.|.+=|=-+.|-...+.-+.. +|.
T Consensus 24 p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~~a~-~l--~~~~v~v~tVigFP~G~~~~~~K~~E~~~Ai~~GAdE 96 (231)
T 3ndo_A 24 PEATPSDVTALVDEAADLGVFAVCVS----PPLVSVAA-GV--APSGLAIAAVAGFPSGKHVPGIKATEAELAVAAGATE 96 (231)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHH-HH--CCTTCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCcEEEEC----HHHHHHHH-Hh--cCCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 56677776554 67888999999884 55677777 66 35567777777666665444333321 443
Q ss_pred EEEcCCCccCCCCC---CcHHHHHHHHHHHHHHc-CCc--eEEEehhhHhhhcCCCCChHhHHHHHH-HHHhccceEEec
Q 008112 343 AMVARGDLGAELPI---EEVPLLQEEIIRTCRSM-GKA--VIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLS 415 (577)
Q Consensus 343 ImIaRGDLg~elg~---e~v~~~qk~Ii~~c~~a-GKP--vi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~D~imLs 415 (577)
|=+ -+.++. .+...+.++|-..+... |+| ||+-|-.|+. ..|..|+..... +...|+|.|=-|
T Consensus 97 IDm-----Vinig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~-----~~t~eei~~a~~ia~~aGADfVKTS 166 (231)
T 3ndo_A 97 IDM-----VIDVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLE-----FSGEPLLADVCRVARDAGADFVKTS 166 (231)
T ss_dssp EEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHH-----HTCHHHHHHHHHHHHHTTCSEEECC
T ss_pred EEE-----EeehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCC-----CCCHHHHHHHHHHHHHHCcCEEEcC
Confidence 321 122222 24455555544433333 444 5666666622 247788877777 667899998765
Q ss_pred cc-cCCCCCHHHHHHHHHHHH
Q 008112 416 GE-TAHGKFPLKAVKVMHTVS 435 (577)
Q Consensus 416 ~E-Ta~G~yP~eaV~~m~~I~ 435 (577)
.= +..|.--++.|+.|++.+
T Consensus 167 TGf~~~~gAt~edv~lm~~~v 187 (231)
T 3ndo_A 167 TGFHPSGGASVQAVEIMARTV 187 (231)
T ss_dssp CSCCTTCSCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHh
Confidence 21 101223468999998875
No 297
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=41.30 E-value=51 Score=33.53 Aligned_cols=60 Identities=12% Similarity=0.112 Sum_probs=41.3
Q ss_pred CcEEEEecCCCCCCHH----HHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHHHHHhcCCCeeEEEeec
Q 008112 109 KTKIVCTIGPSTNTRE----MIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDT 174 (577)
Q Consensus 109 ~tKIi~TiGPs~~~~e----~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl 174 (577)
+....+++| ..+++ ..+++.++|.+.+.+++.|++.+.-.+.++.+|++ .+ ..+.|++|.
T Consensus 133 ~vp~~~~~g--~~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a---~g-~~~~l~vDa 196 (359)
T 1mdl_A 133 PVQAYDSHS--LDGVKLATERAVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQA---VG-DDFGIMVDY 196 (359)
T ss_dssp CEEEEEECC--SCHHHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHH---HC-SSSEEEEEC
T ss_pred CeeeeeecC--CCCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHH---hC-CCCEEEEEC
Confidence 455556655 23443 34567789999999999998887777788877765 34 345666774
No 298
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=41.28 E-value=1.3e+02 Score=30.93 Aligned_cols=129 Identities=17% Similarity=0.190 Sum_probs=69.0
Q ss_pred CCCccCHHHH--------HHHHhcCCCEEEEc---------C----C--CC----------HHHHHHHHHHHHh-cCCCc
Q 008112 273 SITEKDWDDI--------KFGVDNKVDFYAVS---------F----V--KD----------AQVVHELKNYLKS-CGADI 318 (577)
Q Consensus 273 ~ltekD~~dI--------~~al~~gvD~I~~S---------f----V--~s----------a~dv~~lr~~l~~-~~~~i 318 (577)
.||..|++.+ +.+.+.|+|+|=+- | . |+ ..-+.++.+.+.+ .|.+.
T Consensus 132 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~ 211 (343)
T 3kru_A 132 ELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENK 211 (343)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTS
T ss_pred hcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccC
Confidence 6788888776 35677899999776 2 1 21 1122333343433 36678
Q ss_pred eEEEeecChh------hHhhHHHHHHh----cCEEEEcCCCccC-CCCCCcHHHHHHHHHHHHH-HcCCceEEEehhhHh
Q 008112 319 HVIVKIESAD------SIPNLHSIITA----SDGAMVARGDLGA-ELPIEEVPLLQEEIIRTCR-SMGKAVIVATNMLES 386 (577)
Q Consensus 319 ~IiaKIEt~~------gv~NldeIl~~----sDGImIaRGDLg~-elg~e~v~~~qk~Ii~~c~-~aGKPvi~ATq~LeS 386 (577)
.|..||---+ .+++.-++++. +|.|-+.-|...- .++.. +..+-..++..+ ..++|+|....+
T Consensus 212 pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~vd~i~vs~g~~~~~~~~~~--~~~~~~~~~~ir~~~~iPVi~~Ggi--- 286 (343)
T 3kru_A 212 PIFVRVSADDYMEGGINIDMMVEYINMIKDKVDLIDVSSGGLLNVDINLY--PGYQVKYAETIKKRCNIKTSAVGLI--- 286 (343)
T ss_dssp CEEEEEECCCSSTTSCCHHHHHHHHHHHTTTCSEEEEECCCSSCCCCCCC--TTTTHHHHHHHHHHHTCEEEEESSC---
T ss_pred CeEEEeechhhhccCccHHHHHHHHHHhhccccEEeccCCceEeeeeccc--CceeehHHHHHHHhcCcccceeeee---
Confidence 8888885321 13333334332 7888885443321 11101 111222222222 347998875432
Q ss_pred hhcCCCCChHhHHHHHHHHHhc-cceEEec
Q 008112 387 MIVHPTPTRAEVSDIAIAVREG-ADAVMLS 415 (577)
Q Consensus 387 M~~~~~PtrAEv~Dv~nav~~G-~D~imLs 415 (577)
-+. .++..++..| +|+|++.
T Consensus 287 ------~t~---e~Ae~~l~~G~aD~V~iG 307 (343)
T 3kru_A 287 ------TTQ---ELAEEILSNERADLVALG 307 (343)
T ss_dssp ------CCH---HHHHHHHHTTSCSEEEES
T ss_pred ------eHH---HHHHHHHhchhhHHHHHH
Confidence 123 2345677888 9999985
No 299
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=41.27 E-value=27 Score=35.80 Aligned_cols=57 Identities=19% Similarity=0.197 Sum_probs=34.2
Q ss_pred CCCHHHHHHHHHhCCcEEEEeccCCC-----hH--HHHHHHHHHHHHHHhcCCCeeEEEeecCC
Q 008112 120 TNTREMIWKLAEAGMNVARLNMSHGD-----HA--SHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (577)
Q Consensus 120 ~~~~e~l~~li~~Gm~v~RiN~sHg~-----~e--~~~~~i~~ir~~~~~~~~~~i~I~~Dl~G 176 (577)
..+.+.++.|.+.|+|++||-++... .. .-...++.++++.+.+..+-+.+++|+-.
T Consensus 62 ~~~~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~~~vv~~a~~~Gi~vildlH~ 125 (376)
T 3ayr_A 62 KTTEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNGAFVILNLHH 125 (376)
T ss_dssp CCCHHHHHHHHHTTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred cCcHHHHHHHHHcCCCEEEEeeEChhhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEECCC
Confidence 34788999999999999999876421 00 01122233333322222244788999875
No 300
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=41.08 E-value=2.3e+02 Score=27.98 Aligned_cols=122 Identities=12% Similarity=0.127 Sum_probs=71.0
Q ss_pred HHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhccccC
Q 008112 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (577)
Q Consensus 365 ~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~~ 444 (577)
-+...|+..|.++++-. |.......+...-..|++.+....+. .| .++.+...+++.+-...++.
T Consensus 81 alA~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~Ga~v~~~~~~~---~~-~~~~~~a~~l~~~~~~~~~~ 145 (313)
T 2q3b_A 81 ALAMVCAARGYRCVLTM-----------PETMSLERRMLLRAYGAELILTPGAD---GM-SGAIAKAEELAKTDQRYFVP 145 (313)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTEECC
T ss_pred HHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHCCCEEEEeCCCC---CH-HHHHHHHHHHHHhCCCEEeC
Confidence 36677889999987642 21111234555667899988775431 12 35666665555443221111
Q ss_pred CCCCCCCCcccCCChhHH-HHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHh----hCCCCeEEEEcCcHH
Q 008112 445 GAMPPNLGQAFKNHMSEM-FAYHATMMSNTLG--T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTNEKR 508 (577)
Q Consensus 445 ~~~~~~l~~~~~~~~~~~-ia~~a~~~a~~~~--a-aIiV~T~sG~tA~~is~----~RP~~PIIAvT~~~~ 508 (577)
.+ +.+ ...... ...-+.++.++++ . .||+.+-+|.++--+++ ..|...||++.+...
T Consensus 146 ~~-~~n------~~~~~~~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~ 210 (313)
T 2q3b_A 146 QQ-FEN------PANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAAS 210 (313)
T ss_dssp CT-TTC------THHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTS
T ss_pred CC-CCC------hhhHHHHHHHHHHHHHHHcCCCCCEEEEccCcchhHHHHHHHHHHhCCCCEEEEEeeCCC
Confidence 11 111 001111 2223567777774 4 89999999998766665 469999999987643
No 301
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=40.38 E-value=89 Score=31.48 Aligned_cols=150 Identities=11% Similarity=0.081 Sum_probs=85.6
Q ss_pred CCCCccCHHHH-HHHHhc--CCCEEEEcCCCCHHHHHHHHHHHHhcCC--CceEEEeecChhhHhhHHHHHH--------
Q 008112 272 PSITEKDWDDI-KFGVDN--KVDFYAVSFVKDAQVVHELKNYLKSCGA--DIHVIVKIESADSIPNLHSIIT-------- 338 (577)
Q Consensus 272 p~ltekD~~dI-~~al~~--gvD~I~~SfV~sa~dv~~lr~~l~~~~~--~i~IiaKIEt~~gv~NldeIl~-------- 338 (577)
|.-|+.|.+.+ +.+.+. |++.|+++ +..+..+++.+...+. .++|.+-|=-|.|-.+.+..+.
T Consensus 43 p~~T~~dI~~lc~eA~~~~~~~aaVCV~----p~~V~~a~~~L~~~gs~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~ 118 (281)
T 2a4a_A 43 ENGTEDDIRELCNESVKTCPFAAAVCVY----PKFVKFINEKIKQEINPFKPKIACVINFPYGTDSMEKVLNDTEKALDD 118 (281)
T ss_dssp TTCCHHHHHHHHHHHHSSSSCCSEEEEC----GGGHHHHHHHHHHHSSSCCSEEEEEESTTTCCSCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccCCccEEEEC----HHHHHHHHHHhhccCCCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHc
Confidence 44466665444 567778 89999875 4567777888864344 6888887755555444443222
Q ss_pred hcCEEEE--cCCCccCCCCCCcHH---HHHHHHHHHHHHc-CCc--eEEEehhhHhhhcCCCCChHh-HHHHHH-HHHhc
Q 008112 339 ASDGAMV--ARGDLGAELPIEEVP---LLQEEIIRTCRSM-GKA--VIVATNMLESMIVHPTPTRAE-VSDIAI-AVREG 408 (577)
Q Consensus 339 ~sDGImI--aRGDLg~elg~e~v~---~~qk~Ii~~c~~a-GKP--vi~ATq~LeSM~~~~~PtrAE-v~Dv~n-av~~G 408 (577)
=+|.|-+ ..|-| . -.+.. .+.++|-....+. ++| ||+.|-.| +..| +..... ++..|
T Consensus 119 GAdEIDmVinig~l---k-sg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L---------~d~e~i~~A~~ia~eaG 185 (281)
T 2a4a_A 119 GADEIDLVINYKKI---I-ENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGEL---------KTEDLIIKTTLAVLNGN 185 (281)
T ss_dssp TCSEEEEECCHHHH---H-HSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHHH---------CSHHHHHHHHHHHHTTT
T ss_pred CCCEEEEecchHhh---h-CCChhHHHHHHHHHHHHHHHhcCCceEEEEecccC---------CcHHHHHHHHHHHHHhC
Confidence 1554422 11111 0 11233 4455554444433 456 37777766 5566 433333 77899
Q ss_pred cceEEeccccCCCCCHHHHHHHHHHHHHHH
Q 008112 409 ADAVMLSGETAHGKFPLKAVKVMHTVSLRT 438 (577)
Q Consensus 409 ~D~imLs~ETa~G~yP~eaV~~m~~I~~~a 438 (577)
+|.|=-|.-=.-|.--++.|+.|++.++..
T Consensus 186 ADfVKTSTGf~~~gAT~edv~lm~~~v~~~ 215 (281)
T 2a4a_A 186 ADFIKTSTGKVQINATPSSVEYIIKAIKEY 215 (281)
T ss_dssp CSEEECCCSCSSCCCCHHHHHHHHHHHHHH
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 999876521111233468999999988765
No 302
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=40.32 E-value=22 Score=35.34 Aligned_cols=21 Identities=29% Similarity=0.360 Sum_probs=19.1
Q ss_pred CHHHHHHHHHhCCcEEEEecc
Q 008112 122 TREMIWKLAEAGMNVARLNMS 142 (577)
Q Consensus 122 ~~e~l~~li~~Gm~v~RiN~s 142 (577)
+.+.++.|.+.|+|++||-++
T Consensus 33 ~~~di~~~~~~G~n~vRi~i~ 53 (305)
T 1h1n_A 33 DPNTIDTLISKGMNIFRVPFM 53 (305)
T ss_dssp CHHHHHHHHHTTCCEEEEEEC
T ss_pred CHHHHHHHHHCCCCEEEeccc
Confidence 488999999999999999886
No 303
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=40.08 E-value=1.5e+02 Score=30.64 Aligned_cols=94 Identities=15% Similarity=0.107 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCCCccCCC--CCCcHHHHHHHHHHHHHHcCCc
Q 008112 300 DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAEL--PIEEVPLLQEEIIRTCRSMGKA 376 (577)
Q Consensus 300 sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGDLg~el--g~e~v~~~qk~Ii~~c~~aGKP 376 (577)
+.++++.+++.. +.+|+.|.= ...+......+. +|+|.+. |--|..+ +.. -..+-.++.++. .-..|
T Consensus 205 ~w~~i~~lr~~~-----~~PvivK~v--~~~e~A~~a~~~GaD~I~vs-n~GG~~~d~~~~-~~~~L~~i~~av-~~~ip 274 (352)
T 3sgz_A 205 CWNDLSLLQSIT-----RLPIILKGI--LTKEDAELAMKHNVQGIVVS-NHGGRQLDEVSA-SIDALREVVAAV-KGKIE 274 (352)
T ss_dssp CHHHHHHHHHHC-----CSCEEEEEE--CSHHHHHHHHHTTCSEEEEC-CGGGTSSCSSCC-HHHHHHHHHHHH-TTSSE
T ss_pred CHHHHHHHHHhc-----CCCEEEEec--CcHHHHHHHHHcCCCEEEEe-CCCCCccCCCcc-HHHHHHHHHHHh-CCCCe
Confidence 456676666643 456777731 223333333333 8888883 1111111 111 112222222222 12578
Q ss_pred eEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 377 VIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 377 vi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
+|....+- --.|+..++..|+|++++.
T Consensus 275 Via~GGI~------------~g~Dv~kaLalGA~aV~iG 301 (352)
T 3sgz_A 275 VYMDGGVR------------TGTDVLKALALGARCIFLG 301 (352)
T ss_dssp EEEESSCC------------SHHHHHHHHHTTCSEEEES
T ss_pred EEEECCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 88765533 2468999999999999985
No 304
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=40.02 E-value=1.8e+02 Score=27.19 Aligned_cols=39 Identities=10% Similarity=0.268 Sum_probs=28.1
Q ss_pred HHHHHHHhcCCCEEEEcCCC------CHHHHHHHHHHHHhcCCCc
Q 008112 280 DDIKFGVDNKVDFYAVSFVK------DAQVVHELKNYLKSCGADI 318 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV~------sa~dv~~lr~~l~~~~~~i 318 (577)
+.++.+.+.|+|+|=+.... +..++.++++.+.+.|-.+
T Consensus 18 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~ 62 (278)
T 1i60_A 18 LDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKP 62 (278)
T ss_dssp HHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEE
T ss_pred HHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCe
Confidence 45678889999999887222 2367788888888766543
No 305
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=39.99 E-value=1.9e+02 Score=29.16 Aligned_cols=124 Identities=10% Similarity=0.063 Sum_probs=72.3
Q ss_pred HHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhccc
Q 008112 363 QEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATI 442 (577)
Q Consensus 363 qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~ 442 (577)
=.-+...|+..|.++++-. |.......+...-..|++.+....+. .| -++++...++..+-+..+
T Consensus 84 g~alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~~~ 148 (334)
T 3tbh_A 84 GVSLAHLGAIRGYKVIITM-----------PESMSLERRCLLRIFGAEVILTPAAL---GM-KGAVAMAKKIVAANPNAV 148 (334)
T ss_dssp HHHHHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTEE
T ss_pred HHHHHHHHHHhCCCEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECCCC---Cc-hHHHHHHHHHHHhCCCEE
Confidence 3456778889999987642 22222334556677899988876432 22 456666555554432222
Q ss_pred cCCCCCCCCCcccCCChhHHHHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHh----hCCCCeEEEEcCcH
Q 008112 443 TGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLG--T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTNEK 507 (577)
Q Consensus 443 ~~~~~~~~l~~~~~~~~~~~ia~~a~~~a~~~~--a-aIiV~T~sG~tA~~is~----~RP~~PIIAvT~~~ 507 (577)
+..+ |.+ +. .+..-...-+.++.++++ . .||+.+-+|.+.--+++ ..|.+.||++.+..
T Consensus 149 ~i~~-~~n---p~--n~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~ 214 (334)
T 3tbh_A 149 LADQ-FAT---KY--NALIHEETTGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPTE 214 (334)
T ss_dssp ECCT-TTC---HH--HHHHHHHTHHHHHHHHTTSCCSEEEEECSSSHHHHHHHHHHHHTTCCCEEEEEEETT
T ss_pred ECCc-cCC---hh--HHHHHHHHHHHHHHHHhCCCCCEEEeccCCcHhHHHHHHHHHHhCCCCEEEEEeeCC
Confidence 2111 111 00 011111223456777763 4 79999999988766654 47999999997654
No 306
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=39.50 E-value=1.6e+02 Score=29.79 Aligned_cols=122 Identities=15% Similarity=0.131 Sum_probs=73.1
Q ss_pred HHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhcc-cc
Q 008112 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEAT-IT 443 (577)
Q Consensus 365 ~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~-~~ 443 (577)
-+...|+..|.++++-. |.......+...-..|++.+...++. .| -++.+...+++.+.... +.
T Consensus 92 alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~~y~~ 156 (343)
T 2pqm_A 92 ALCQAGAVFGYRVNIAM-----------PSTMSVERQMIMKAFGAELILTEGKK---GM-PGAIEEVNKMIKENPGKYFV 156 (343)
T ss_dssp HHHHHHHHHTCCEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHSTTTEEE
T ss_pred HHHHHHHHcCCCEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECCCC---CH-HHHHHHHHHHHHhCCCcEEE
Confidence 46677889999987642 22222334556667899988765421 13 36776666665543322 11
Q ss_pred CCCCCCCCCcccCCChhHHHHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHh----hCCCCeEEEEcCcHH
Q 008112 444 GGAMPPNLGQAFKNHMSEMFAYHATMMSNTLG--T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTNEKR 508 (577)
Q Consensus 444 ~~~~~~~l~~~~~~~~~~~ia~~a~~~a~~~~--a-aIiV~T~sG~tA~~is~----~RP~~PIIAvT~~~~ 508 (577)
..+ |.+ + .+ +..-...-+ ++.++++ . .||+.+-+|.++--+++ ..|...||++.+...
T Consensus 157 ~~~-~~n---~-~n-~~~g~~t~~-Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigVe~~~~ 221 (343)
T 2pqm_A 157 ANQ-FGN---P-DN-TAAHHYTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEES 221 (343)
T ss_dssp CCT-TTC---H-HH-HHHHHHHHH-HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGG
T ss_pred CCC-CCC---h-hH-HHHHHHHHH-HHHHHcCCCCCEEEEecCCchhHHHHHHHHHHcCCCCEEEEEecCCC
Confidence 111 111 0 00 111123344 7777775 4 89999999998776664 479999999998654
No 307
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=38.99 E-value=26 Score=38.64 Aligned_cols=51 Identities=25% Similarity=0.408 Sum_probs=42.2
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHH
Q 008112 108 RKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKE 158 (577)
Q Consensus 108 r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~ 158 (577)
++-.+=+.+|-.-.+.|-++.|+++|+|++=|+.+||..+...++++.||+
T Consensus 268 grL~VgAAVgv~~d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~ 318 (556)
T 4af0_A 268 KQLYCGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQ 318 (556)
T ss_dssp CCBCCEEEECSSHHHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHH
T ss_pred hceeeEEEeccCccHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHh
Confidence 345566777766677888999999999999999999999888777777775
No 308
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=38.88 E-value=41 Score=35.31 Aligned_cols=96 Identities=15% Similarity=0.143 Sum_probs=50.2
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEc-CCCccCCCCCCcHHHHHHHHHHHHHHcCCce
Q 008112 300 DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVA-RGDLGAELPIEEVPLLQEEIIRTCRSMGKAV 377 (577)
Q Consensus 300 sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIa-RGDLg~elg~e~v~~~qk~Ii~~c~~aGKPv 377 (577)
+.++++++++.. +.+++.|.= ...+......+. +|+|.|. +|-=....+...+ ..-.++.++. .-.+||
T Consensus 240 ~~~~i~~lr~~~-----~~PvivKgv--~~~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~-~~l~~v~~av-~~~ipV 310 (392)
T 2nzl_A 240 SWEDIKWLRRLT-----SLPIVAKGI--LRGDDAREAVKHGLNGILVSNHGARQLDGVPATI-DVLPEIVEAV-EGKVEV 310 (392)
T ss_dssp CHHHHHHHC--C-----CSCEEEEEE--CCHHHHHHHHHTTCCEEEECCGGGTSSTTCCCHH-HHHHHHHHHH-TTSSEE
T ss_pred HHHHHHHHHHhh-----CCCEEEEec--CCHHHHHHHHHcCCCEEEeCCCCCCcCCCCcChH-HHHHHHHHHc-CCCCEE
Confidence 456676666543 467788721 223344444444 8999884 1100011222222 1222222222 124888
Q ss_pred EEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEecc
Q 008112 378 IVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG 416 (577)
Q Consensus 378 i~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ 416 (577)
|....+- --.|+..++..|+|++|+..
T Consensus 311 ia~GGI~------------~g~Dv~kalalGAd~V~iGr 337 (392)
T 2nzl_A 311 FLDGGVR------------KGTDVLKALALGAKAVFVGR 337 (392)
T ss_dssp EECSSCC------------SHHHHHHHHHTTCSEEEECH
T ss_pred EEECCCC------------CHHHHHHHHHhCCCeeEECH
Confidence 8755433 24689999999999999853
No 309
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=38.73 E-value=3.1e+02 Score=27.28 Aligned_cols=146 Identities=12% Similarity=0.152 Sum_probs=87.9
Q ss_pred CCCCccCHHHHHHHHhcCCCEEEEcCC-------------CCHHHHHHHHHHHHhcCCCceEEEeecC------hhhHhh
Q 008112 272 PSITEKDWDDIKFGVDNKVDFYAVSFV-------------KDAQVVHELKNYLKSCGADIHVIVKIES------ADSIPN 332 (577)
Q Consensus 272 p~ltekD~~dI~~al~~gvD~I~~SfV-------------~sa~dv~~lr~~l~~~~~~i~IiaKIEt------~~gv~N 332 (577)
..+|-+|.---+.+-+.|+|.|.+..- -+.+++..--+.+...-....|++=++- .++++|
T Consensus 20 ~~~tayD~~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~~~~a~~~ 99 (264)
T 1m3u_A 20 ATITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFEN 99 (264)
T ss_dssp EEEECCSHHHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSSHHHHHHH
T ss_pred EEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCCHHHHHHH
Confidence 345778888888888899999988631 1224444333444444455677887764 356778
Q ss_pred HHHHHHh-cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceE----EEehhhHhh---hcCCCCChH----hHHH
Q 008112 333 LHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVI----VATNMLESM---IVHPTPTRA----EVSD 400 (577)
Q Consensus 333 ldeIl~~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi----~ATq~LeSM---~~~~~PtrA----Ev~D 400 (577)
...+++. +++|-+--|+ .+...|+++.++|+||+ +--|-...+ .-..+ |.+ -+.|
T Consensus 100 a~rl~kaGa~aVklEgg~------------e~~~~I~al~~agipV~gHiGLtPq~v~~~ggf~v~gr-t~~~a~~~i~r 166 (264)
T 1m3u_A 100 AATVMRAGANMVKIEGGE------------WLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGR-GDEAGDQLLSD 166 (264)
T ss_dssp HHHHHHTTCSEEECCCSG------------GGHHHHHHHHHTTCCEEEEEESCGGGHHHHTSSCCCCC-SHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCcH------------HHHHHHHHHHHCCCCeEeeecCCceeecccCCeEEEeC-CHHHHHHHHHH
Confidence 8888876 8899885441 23455677788999986 222222111 11111 222 2345
Q ss_pred HHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHh
Q 008112 401 IAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (577)
Q Consensus 401 v~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE 439 (577)
.......|+|+++|-+ - |. .....|.++..
T Consensus 167 A~a~~eAGA~~ivlE~-----v-p~---~~a~~it~~l~ 196 (264)
T 1m3u_A 167 ALALEAAGAQLLVLEC-----V-PV---ELAKRITEALA 196 (264)
T ss_dssp HHHHHHHTCCEEEEES-----C-CH---HHHHHHHHHCS
T ss_pred HHHHHHCCCcEEEEec-----C-CH---HHHHHHHHhCC
Confidence 5567888999999942 1 42 23456666554
No 310
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=38.69 E-value=1.6e+02 Score=30.09 Aligned_cols=150 Identities=15% Similarity=0.121 Sum_probs=82.9
Q ss_pred ccCHHHHHHHHhcCCCE--EEEcCCCCHHHHHHHHHHHHhcCCCceEEEe-ecChhhHhhHHHHHHh--c--CEEEEcCC
Q 008112 276 EKDWDDIKFGVDNKVDF--YAVSFVKDAQVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITA--S--DGAMVARG 348 (577)
Q Consensus 276 ekD~~dI~~al~~gvD~--I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaK-IEt~~gv~NldeIl~~--s--DGImIaRG 348 (577)
..|.+-++.|++.|++. ++-|.-.. ...++-..+.+. +..++++ ..+.+-++.+-+.+.. . +-|++.+|
T Consensus 141 T~~~eV~eaAleagag~~~lINsv~~~--~~~~m~~laa~~--g~~vVlmh~~d~~~~~~l~~~a~~~GI~~e~IIlDPg 216 (323)
T 4djd_D 141 EKDHEVLEAVAEAAAGENLLLGNAEQE--NYKSLTAACMVH--KHNIIARSPLDINICKQLNILINEMNLPLDHIVIDPS 216 (323)
T ss_dssp HHHHHHHHHHHHHTTTSCCEEEEEBTT--BCHHHHHHHHHH--TCEEEEECSSCHHHHHHHHHHHHTTTCCGGGEEEECC
T ss_pred CCCHHHHHHHHHhcCCCCCeEEECCcc--cHHHHHHHHHHh--CCeEEEEccchHHHHHHHHHHHHHcCCCHHHEEEeCC
Confidence 46778888888888662 32232111 122333333333 3445554 2122333333333333 2 45888887
Q ss_pred CccCCCCCCcHHHHHHHHHHHH----HHcCCceEEEehhhHhhhcC-------------CCCChH---hHHHHHHHHHhc
Q 008112 349 DLGAELPIEEVPLLQEEIIRTC----RSMGKAVIVATNMLESMIVH-------------PTPTRA---EVSDIAIAVREG 408 (577)
Q Consensus 349 DLg~elg~e~v~~~qk~Ii~~c----~~aGKPvi~ATq~LeSM~~~-------------~~PtrA---Ev~Dv~nav~~G 408 (577)
=....-+.+.-....+++=..+ +..|-|+++.+ --+||+.. +...|. |+.-....+.-|
T Consensus 217 ~g~fgk~~e~~l~~l~~ir~~al~~~~~lg~PvL~Gv-Srksf~~ke~~~~~~~~~~~g~~~~~~~~~E~~~a~~~~~~~ 295 (323)
T 4djd_D 217 IGGLGYGIEYSFSIMERIRLGALQGDKMLSMPVICTV-GYEAWRAKEASAPVSEYPGWGKETERGILWEAVTATALLQAG 295 (323)
T ss_dssp CCCTTTTHHHHHHHHHHHHHHHHHTCGGGCSCBEEEH-HHHHHTSHHHHCCTTTCGGGCCHHHHHHHHHHHHHHHHHTTT
T ss_pred CccccCCHHHHHHHHHHHHHHhhcccccCCCCEEEec-chhhhhhccccccccccccccccchhhHHHHHHHHHHHHHhc
Confidence 6544455555555555554432 36899999753 12344432 111233 455556688899
Q ss_pred cceEEeccccCCCCCHHHHHHHHHHHHHHH
Q 008112 409 ADAVMLSGETAHGKFPLKAVKVMHTVSLRT 438 (577)
Q Consensus 409 ~D~imLs~ETa~G~yP~eaV~~m~~I~~~a 438 (577)
+|.++|. +| ++|+++++++...
T Consensus 296 ~~i~v~~-------~p-~~~~~~~~~~~~l 317 (323)
T 4djd_D 296 AHILLMR-------HP-EAVARVKENIDQL 317 (323)
T ss_dssp CSEEEEC-------CH-HHHHHHHHHHHHH
T ss_pred CCEEEEc-------CH-HHHHHHHHHHHHH
Confidence 9999994 67 8899988887654
No 311
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=38.56 E-value=3.2e+02 Score=27.41 Aligned_cols=133 Identities=18% Similarity=0.092 Sum_probs=73.3
Q ss_pred cCHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEe--ecChhhHhhHHHHHHh-cCEEEEcCCCccCC
Q 008112 277 KDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVK--IESADSIPNLHSIITA-SDGAMVARGDLGAE 353 (577)
Q Consensus 277 kD~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaK--IEt~~gv~NldeIl~~-sDGImIaRGDLg~e 353 (577)
.+.+....+.+.|.-++..+---+++.+.+..+.+.+.- +..+.+. +-++.--+.++.+++. +|+|.++-|+
T Consensus 38 s~~~la~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~~-~~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~g~---- 112 (326)
T 3bo9_A 38 GTPTLAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQKT-DKPFGVNIILVSPWADDLVKVCIEEKVPVVTFGAGN---- 112 (326)
T ss_dssp SCHHHHHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTTC-SSCEEEEEETTSTTHHHHHHHHHHTTCSEEEEESSC----
T ss_pred CCHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhc-CCCEEEEEeccCCCHHHHHHHHHHCCCCEEEECCCC----
Confidence 456667777778875554333337777766555555432 2222222 2233333344444444 8999987542
Q ss_pred CCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCC-HHHHHHHHH
Q 008112 354 LPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKF-PLKAVKVMH 432 (577)
Q Consensus 354 lg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~y-P~eaV~~m~ 432 (577)
| ..+++.+++.|++++... .+. .++..+...|+|++.+++=.+-|.- +.-....+.
T Consensus 113 -p--------~~~~~~l~~~g~~v~~~v-----------~s~---~~a~~a~~~GaD~i~v~g~~~GG~~G~~~~~~ll~ 169 (326)
T 3bo9_A 113 -P--------TKYIRELKENGTKVIPVV-----------ASD---SLARMVERAGADAVIAEGMESGGHIGEVTTFVLVN 169 (326)
T ss_dssp -C--------HHHHHHHHHTTCEEEEEE-----------SSH---HHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHH
T ss_pred -c--------HHHHHHHHHcCCcEEEEc-----------CCH---HHHHHHHHcCCCEEEEECCCCCccCCCccHHHHHH
Confidence 2 245667788899988632 233 3345677899999999653332210 112445555
Q ss_pred HHHHH
Q 008112 433 TVSLR 437 (577)
Q Consensus 433 ~I~~~ 437 (577)
.+...
T Consensus 170 ~i~~~ 174 (326)
T 3bo9_A 170 KVSRS 174 (326)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 312
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=38.39 E-value=62 Score=33.64 Aligned_cols=99 Identities=14% Similarity=0.072 Sum_probs=53.5
Q ss_pred CCCCccCHHHH-HHHHhcCCCEEEEcCCCC-----------------------HHHHHHHHHHHHhcCCCceEEE--eec
Q 008112 272 PSITEKDWDDI-KFGVDNKVDFYAVSFVKD-----------------------AQVVHELKNYLKSCGADIHVIV--KIE 325 (577)
Q Consensus 272 p~ltekD~~dI-~~al~~gvD~I~~SfV~s-----------------------a~dv~~lr~~l~~~~~~i~Iia--KIE 325 (577)
|.+++.|..++ +.+.+.|+|+|.++.-.. +-.++.+++.-+..+.++.||+ -|.
T Consensus 229 p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~ 308 (367)
T 3zwt_A 229 PDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVS 308 (367)
T ss_dssp SCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCC
Confidence 34555555544 455689999999874321 1112333333333345788887 366
Q ss_pred ChhhHhhHHHHHHh-cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCC
Q 008112 326 SADSIPNLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGK 375 (577)
Q Consensus 326 t~~gv~NldeIl~~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGK 375 (577)
|.+- ..+.+.. +|+||+||+=|-- +..-+..+.+.+-....+.|.
T Consensus 309 s~~d---a~~~l~~GAd~V~vgra~l~~--gP~~~~~i~~~l~~~m~~~G~ 354 (367)
T 3zwt_A 309 SGQD---ALEKIRAGASLVQLYTALTFW--GPPVVGKVKRELEALLKEQGF 354 (367)
T ss_dssp SHHH---HHHHHHHTCSEEEESHHHHHH--CTHHHHHHHHHHHHHHHHTTC
T ss_pred CHHH---HHHHHHcCCCEEEECHHHHhc--CcHHHHHHHHHHHHHHHHcCC
Confidence 5432 3333333 9999999986411 222344444555555555553
No 313
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=37.96 E-value=64 Score=31.10 Aligned_cols=116 Identities=19% Similarity=0.267 Sum_probs=72.4
Q ss_pred HHHHHHHhcCCCEEEE-----cCCCC----HHHHHHHHHHHHhcCCC--ceEEEeecChhhHhhHHHHHHh-cCEEEEcC
Q 008112 280 DDIKFGVDNKVDFYAV-----SFVKD----AQVVHELKNYLKSCGAD--IHVIVKIESADSIPNLHSIITA-SDGAMVAR 347 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~-----SfV~s----a~dv~~lr~~l~~~~~~--i~IiaKIEt~~gv~NldeIl~~-sDGImIaR 347 (577)
++++...+.|+|++-+ .||.+ ++-++++|+.. |.+ +-+-.++++++. -++..+++ +|+|-+.
T Consensus 21 ~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~---~~~~~~dvhLmv~~p~~--~i~~~~~aGad~itvH- 94 (228)
T 3ovp_A 21 AECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQL---GQDPFFDMHMMVSKPEQ--WVKPMAVAGANQYTFH- 94 (228)
T ss_dssp HHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHH---CSSSCEEEEEECSCGGG--GHHHHHHHTCSEEEEE-
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhh---CCCCcEEEEEEeCCHHH--HHHHHHHcCCCEEEEc-
Confidence 4556667789999998 88754 56677777654 223 334557888864 46777766 9999985
Q ss_pred CCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEe-ccccCCCC
Q 008112 348 GDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML-SGETAHGK 422 (577)
Q Consensus 348 GDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imL-s~ETa~G~ 422 (577)
.|-+ +. -.+.++.++++|+.++++... .+|- ..+ ..+...+|.+++ |-+.-.|-
T Consensus 95 ----~Ea~-~~----~~~~i~~i~~~G~k~gval~p-------~t~~-e~l----~~~l~~~D~Vl~msv~pGf~G 149 (228)
T 3ovp_A 95 ----LEAT-EN----PGALIKDIRENGMKVGLAIKP-------GTSV-EYL----APWANQIDMALVMTVEPGFGG 149 (228)
T ss_dssp ----GGGC-SC----HHHHHHHHHHTTCEEEEEECT-------TSCG-GGT----GGGGGGCSEEEEESSCTTTCS
T ss_pred ----cCCc-hh----HHHHHHHHHHcCCCEEEEEcC-------CCCH-HHH----HHHhccCCeEEEeeecCCCCC
Confidence 1222 12 256778889999999997531 1221 111 233456888875 44544443
No 314
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=37.90 E-value=24 Score=35.01 Aligned_cols=140 Identities=16% Similarity=0.104 Sum_probs=73.3
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCHHH-HHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEcCCCccCC----
Q 008112 279 WDDIKFGVDNKVDFYAVSFVKDAQV-VHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAE---- 353 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~sa~d-v~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIaRGDLg~e---- 353 (577)
.+.++.+.+.|+|+|..+|+.+..+ ++.+++ .+.++.+++.+.|++-.... .-.-+|.|-+- |.=+..
T Consensus 90 ~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~----~~~~i~l~~~v~~~~~~~~a--~~~Gad~I~v~-G~~~~g~~~e 162 (297)
T 2zbt_A 90 FVEAMILEAIGVDFIDESEVLTPADEEHHIDK----WKFKVPFVCGARNLGEALRR--IAEGAAMIRTK-GEAGTGNVVE 162 (297)
T ss_dssp HHHHHHHHHTTCSEEEEETTSCCSCSSCCCCG----GGCSSCEEEEESSHHHHHHH--HHTTCSEEEEC-CCSSSCCTHH
T ss_pred HHHHHHHHHCCCCEEeeeCCCChHHHHHHHHH----hCCCceEEeecCCHHHHHHH--HHcCCCEEEEc-ccccCcchHH
Confidence 6778888899999998787654322 222222 12367777777666543221 11227777553 210000
Q ss_pred -----------------C-CCCc------HHHHHHHHHHHHHHcCCceE-EEehhhHhhhcCCCCChHhHHHHHHHHHhc
Q 008112 354 -----------------L-PIEE------VPLLQEEIIRTCRSMGKAVI-VATNMLESMIVHPTPTRAEVSDIAIAVREG 408 (577)
Q Consensus 354 -----------------l-g~e~------v~~~qk~Ii~~c~~aGKPvi-~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G 408 (577)
+ |... .+...+.+-+.+...+.|++ .+.. ..-+. .|+..+...|
T Consensus 163 ~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~~a~G--------GI~~~---e~i~~~~~aG 231 (297)
T 2zbt_A 163 AVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHGRLPVVNFAAG--------GIATP---ADAALMMHLG 231 (297)
T ss_dssp HHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHSSCSSCEEBCS--------SCCSH---HHHHHHHHTT
T ss_pred HHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhcCCCcEEEeeC--------CCCCH---HHHHHHHHcC
Confidence 0 0000 00001122222334577765 1221 12233 5677778889
Q ss_pred cceEEeccccCCCCCHHHHHHHHHHHHH
Q 008112 409 ADAVMLSGETAHGKFPLKAVKVMHTVSL 436 (577)
Q Consensus 409 ~D~imLs~ETa~G~yP~eaV~~m~~I~~ 436 (577)
+|++++..--.....|.++++.+.+.++
T Consensus 232 adgvvvGsai~~~~dp~~~~~~l~~~i~ 259 (297)
T 2zbt_A 232 MDGVFVGSGIFKSGDPRKRARAIVRAVA 259 (297)
T ss_dssp CSEEEECGGGGGSSCHHHHHHHHHHHHH
T ss_pred CCEEEEchHHhCCCCHHHHHHHHHHHHH
Confidence 9999986332222458888888776654
No 315
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=37.83 E-value=40 Score=36.04 Aligned_cols=48 Identities=25% Similarity=0.450 Sum_probs=38.6
Q ss_pred EEEEecCCCCCCHHHHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHH
Q 008112 111 KIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKE 158 (577)
Q Consensus 111 KIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~ 158 (577)
.+.+-+|+.....+.++.++++|++++=++++||......+.++.+|+
T Consensus 227 ~vga~ig~~~~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~ 274 (494)
T 1vrd_A 227 LVGAAVGTSPETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKA 274 (494)
T ss_dssp CCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHH
T ss_pred ccccccCcCHhHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHH
Confidence 344456766666889999999999999999999988777777777775
No 316
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=37.70 E-value=3.2e+02 Score=27.29 Aligned_cols=110 Identities=22% Similarity=0.135 Sum_probs=63.2
Q ss_pred CHHHHHHHHhcCC-CEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEee--cChhhHhhHHHHHHh-cCEEEEcCCCccCC
Q 008112 278 DWDDIKFGVDNKV-DFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKI--ESADSIPNLHSIITA-SDGAMVARGDLGAE 353 (577)
Q Consensus 278 D~~dI~~al~~gv-D~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKI--Et~~gv~NldeIl~~-sDGImIaRGDLg~e 353 (577)
+.+....+.+.|. .++...++ +++.+.+..+.+.+.- +..+.+.+ -++.--+.++...+. .|+|.++-|.
T Consensus 25 ~~~la~av~~aG~lG~i~~~~~-~~~~~~~~i~~i~~~~-~~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~g~---- 98 (332)
T 2z6i_A 25 DGDLAGAVSKAGGLGIIGGGNA-PKEVVKANIDKIKSLT-DKPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAGN---- 98 (332)
T ss_dssp CHHHHHHHHHHTSBEEEECTTC-CHHHHHHHHHHHHHHC-CSCEEEEECTTSTTHHHHHHHHHHTTCSEEEECSSC----
T ss_pred cHHHHHHHHhCCCcEEeCCCCC-CHHHHHHHHHHHHHhc-CCCEEEEecCCCCCHHHHHHHHHHCCCCEEEECCCC----
Confidence 5667777777886 66666665 6666655444444332 22233332 133212223333333 8999987542
Q ss_pred CCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEecc
Q 008112 354 LPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG 416 (577)
Q Consensus 354 lg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ 416 (577)
| .++++.+++.|.|++.-. .+.. ++..+...|+|++.+++
T Consensus 99 -p--------~~~i~~l~~~g~~v~~~v-----------~~~~---~a~~~~~~GaD~i~v~g 138 (332)
T 2z6i_A 99 -P--------SKYMERFHEAGIIVIPVV-----------PSVA---LAKRMEKIGADAVIAEG 138 (332)
T ss_dssp -G--------GGTHHHHHHTTCEEEEEE-----------SSHH---HHHHHHHTTCSCEEEEC
T ss_pred -h--------HHHHHHHHHcCCeEEEEe-----------CCHH---HHHHHHHcCCCEEEEEC
Confidence 2 235666777899998642 1222 34457778999999965
No 317
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=37.69 E-value=2.2e+02 Score=27.96 Aligned_cols=133 Identities=11% Similarity=-0.044 Sum_probs=69.4
Q ss_pred ccCHHHHHHHHhcCCCEEEEcCCCCHH-------------------------HHHHHHHHHHhc--CC--CceEEEeec-
Q 008112 276 EKDWDDIKFGVDNKVDFYAVSFVKDAQ-------------------------VVHELKNYLKSC--GA--DIHVIVKIE- 325 (577)
Q Consensus 276 ekD~~dI~~al~~gvD~I~~SfV~sa~-------------------------dv~~lr~~l~~~--~~--~i~IiaKIE- 325 (577)
.+|.+.++...+.|+.+|..-.|.... .++.+.+.+... .. +..+++.|=
T Consensus 23 ~~~~~~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~~~~~~p~~~~i~g 102 (311)
T 1jub_A 23 CMTIEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFDYYLDYVLKNQKENAQEGPIFFSIAG 102 (311)
T ss_dssp CSSHHHHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHHHHHTCSSSCCEEEECC
T ss_pred CCCHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCccHHHHHHHHHHHHHhcCCCCCEEEEcCC
Confidence 357777777778888877543332111 022222222211 12 566777763
Q ss_pred -ChhhHhhHHHHHH-h-cC-EEEEcCCCc----cCCCCCCcHHHHHHHHHHHHHHc-CCceEEEehhhHhhhcCCCCChH
Q 008112 326 -SADSIPNLHSIIT-A-SD-GAMVARGDL----GAELPIEEVPLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRA 396 (577)
Q Consensus 326 -t~~gv~NldeIl~-~-sD-GImIaRGDL----g~elg~e~v~~~qk~Ii~~c~~a-GKPvi~ATq~LeSM~~~~~PtrA 396 (577)
+.+.....-+.+. . .| +|-+.=+.= +.+++ .=+....+++++.+++ ++|+++=. .+..+..
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g--~~~e~~~~iv~~vr~~~~~Pv~vKi--------~~~~~~~ 172 (311)
T 1jub_A 103 MSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLA--YDFEATEKLLKEVFTFFTKPLGVKL--------PPYFDLV 172 (311)
T ss_dssp SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGG--GCHHHHHHHHHHHTTTCCSCEEEEE--------CCCCSHH
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCccccc--CCHHHHHHHHHHHHHhcCCCEEEEE--------CCCCCHH
Confidence 3333333322222 2 58 888742100 00111 1123346777777766 89998721 2334666
Q ss_pred hHHHHHH-HHHhccceEEecccc
Q 008112 397 EVSDIAI-AVREGADAVMLSGET 418 (577)
Q Consensus 397 Ev~Dv~n-av~~G~D~imLs~ET 418 (577)
++.+++. +...|+|++.+++=|
T Consensus 173 ~~~~~a~~~~~~G~d~i~v~~~~ 195 (311)
T 1jub_A 173 HFDIMAEILNQFPLTYVNSVNSI 195 (311)
T ss_dssp HHHHHHHHHTTSCCCEEEECCCE
T ss_pred HHHHHHHHHHHcCCcEEEecCCC
Confidence 7766555 445699999997543
No 318
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=37.60 E-value=72 Score=30.62 Aligned_cols=143 Identities=18% Similarity=0.227 Sum_probs=77.9
Q ss_pred CCCCccCHH----HHHHHHhcCCCEEEE-----cCCCC----HHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHH
Q 008112 272 PSITEKDWD----DIKFGVDNKVDFYAV-----SFVKD----AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT 338 (577)
Q Consensus 272 p~ltekD~~----dI~~al~~gvD~I~~-----SfV~s----a~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~ 338 (577)
|++..-|.. .++.+.+.|+|++-+ +||.+ .+.++++|+.. +....+-.++++++- -++..++
T Consensus 9 psila~D~~~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~---~~~~~vhlmv~dp~~--~i~~~~~ 83 (230)
T 1tqj_A 9 PSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLT---KKTLDVHLMIVEPEK--YVEDFAK 83 (230)
T ss_dssp EBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGC---CSEEEEEEESSSGGG--THHHHHH
T ss_pred EEeeecCHhHHHHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhc---CCcEEEEEEccCHHH--HHHHHHH
Confidence 444444543 445667789998632 34433 24455554432 122344478887643 4555555
Q ss_pred h-cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEe-cc
Q 008112 339 A-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML-SG 416 (577)
Q Consensus 339 ~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imL-s~ 416 (577)
+ +||+.+.-.-. -+ + .-.+.++.++.+|+-+++++. |. |..| ...++..++|.+.+ |-
T Consensus 84 aGadgv~vh~e~~---~~--~---~~~~~~~~i~~~g~~~gv~~~--------p~-t~~e---~~~~~~~~~D~v~~msv 143 (230)
T 1tqj_A 84 AGADIISVHVEHN---AS--P---HLHRTLCQIRELGKKAGAVLN--------PS-TPLD---FLEYVLPVCDLILIMSV 143 (230)
T ss_dssp HTCSEEEEECSTT---TC--T---THHHHHHHHHHTTCEEEEEEC--------TT-CCGG---GGTTTGGGCSEEEEESS
T ss_pred cCCCEEEECcccc---cc--h---hHHHHHHHHHHcCCcEEEEEe--------CC-CcHH---HHHHHHhcCCEEEEEEe
Confidence 5 89999861100 11 1 134678888999999998762 11 2222 22455678998754 22
Q ss_pred ccC--CCCCHHHHHHHHHHHHHHHh
Q 008112 417 ETA--HGKFPLKAVKVMHTVSLRTE 439 (577)
Q Consensus 417 ETa--~G~yP~eaV~~m~~I~~~aE 439 (577)
+.. --+|+....+.++++.+..+
T Consensus 144 ~pg~ggq~~~~~~~~~i~~lr~~~~ 168 (230)
T 1tqj_A 144 NPGFGGQSFIPEVLPKIRALRQMCD 168 (230)
T ss_dssp CC----CCCCGGGHHHHHHHHHHHH
T ss_pred ccccCCccCcHHHHHHHHHHHHHHH
Confidence 222 22466566666666655554
No 319
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=37.49 E-value=69 Score=32.62 Aligned_cols=153 Identities=14% Similarity=0.176 Sum_probs=86.3
Q ss_pred CCCCccCHHHH-HHHH-hcCCCEEEEcCCCCHHHHHHHHHHHHhcC---CCceEEEeecChhhHhhHHHHHHh-------
Q 008112 272 PSITEKDWDDI-KFGV-DNKVDFYAVSFVKDAQVVHELKNYLKSCG---ADIHVIVKIESADSIPNLHSIITA------- 339 (577)
Q Consensus 272 p~ltekD~~dI-~~al-~~gvD~I~~SfV~sa~dv~~lr~~l~~~~---~~i~IiaKIEt~~gv~NldeIl~~------- 339 (577)
|..|+.|.+.+ +.|. +.++..|+++ +..|..+++.|...+ .+++|.+=|=-|.|-...+..+..
T Consensus 37 p~~T~e~I~~lc~eA~~~~~~aaVCV~----P~~V~~a~~~L~~~~~~~s~v~V~tVigFP~G~~~~e~K~~Ea~~Av~~ 112 (297)
T 4eiv_A 37 DGETNESVAAVCKIAAKDPAIVGVSVR----PAFVRFIRQELVKSAPEVAGIKVCAAVNFPEGTGTPDTVSLEAVGALKD 112 (297)
T ss_dssp TTCCHHHHHHHHHHHHSSSCCSEEEEC----GGGHHHHHHTGGGTCGGGGGSEEEEEESTTTCCCCHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHhhcCcEEEEEC----HHHHHHHHHHhcccCcCCCCCeEEEEecCCCCCCCHHHHHHHHHHHHHc
Confidence 45566665443 5666 6777777764 567888888886544 467888877777776655544432
Q ss_pred -cCEE--EEcCCCccCCCCCCcHHHHH---HHHHHHHHHcCCceEEEehhhHhhhcCCCCChHh-HHHHHH-HHHhccce
Q 008112 340 -SDGA--MVARGDLGAELPIEEVPLLQ---EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAE-VSDIAI-AVREGADA 411 (577)
Q Consensus 340 -sDGI--mIaRGDLg~elg~e~v~~~q---k~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAE-v~Dv~n-av~~G~D~ 411 (577)
+|-| .|..|-|--.. ..+...+. +.+.++|...-..||+-|-.| +..| +..... ++..|+|.
T Consensus 113 GAdEIDmVinig~lk~~~-~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~~L---------t~~e~i~~A~~ia~~AGADF 182 (297)
T 4eiv_A 113 GADEIECLIDWRRMNENV-ADGESRIRLLVSEVKKVVGPKTLKVVLSGGEL---------QGGDIISRAAVAALEGGADF 182 (297)
T ss_dssp TCSEEEEECCTHHHHHCH-HHHHHHHHHHHHHHHHHHTTSEEEEECCSSCC---------CCHHHHHHHHHHHHHHTCSE
T ss_pred CCCEEEeeeeHHHHhccc-CCcHHHHHHHHHHHHHHhcCCceEEEEecccC---------CcHHHHHHHHHHHHHhCCCE
Confidence 2322 12222221000 01233344 345555532223456655555 4455 443333 67889999
Q ss_pred EEeccccCCCCCHHHHHHHHHHHHHHH
Q 008112 412 VMLSGETAHGKFPLKAVKVMHTVSLRT 438 (577)
Q Consensus 412 imLs~ETa~G~yP~eaV~~m~~I~~~a 438 (577)
|=-|.==..|.--++.|+.|.+.+++.
T Consensus 183 VKTSTGf~~~gAT~edV~lM~~~v~~~ 209 (297)
T 4eiv_A 183 LQTSSGLGATHATMFTVHLISIALREY 209 (297)
T ss_dssp EECCCSSSSCCCCHHHHHHHHHHHHHH
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 876632222344679999999999754
No 320
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=37.42 E-value=38 Score=33.84 Aligned_cols=52 Identities=19% Similarity=0.216 Sum_probs=40.6
Q ss_pred HHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHHHHHhcCCCeeEEEeecCCCee
Q 008112 125 MIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEV 179 (577)
Q Consensus 125 ~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~Gpki 179 (577)
..++|+++|.++.=+|+--...++..++...|+.+.+..+ +.|.+|+.=|++
T Consensus 39 ~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~---~pisIDT~~~~v 90 (271)
T 2yci_X 39 WARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVD---LPCCLDSTNPDA 90 (271)
T ss_dssp HHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCC---CCEEEECSCHHH
T ss_pred HHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCC---CeEEEeCCCHHH
Confidence 4578999999999999977777888999888888876654 557778654433
No 321
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=36.79 E-value=3.2e+02 Score=29.84 Aligned_cols=138 Identities=12% Similarity=0.068 Sum_probs=0.0
Q ss_pred HHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCCCccCCCCCCc
Q 008112 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIEE 358 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGDLg~elg~e~ 358 (577)
++++.+++.|+|+|-+. ++--.+..+|+.+ +.+..|-+=+-|.+-+....+.-.. +|+|.+|+- +........
T Consensus 76 D~~dlA~~~gAdGVHLg--q~dl~~~~ar~~l---g~~~iiG~S~ht~eea~~A~~~G~~~aDYv~~Gpv-f~T~tK~~~ 149 (540)
T 3nl6_A 76 DRIDVAMAIGADGIHVG--QDDMPIPMIRKLV---GPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTL-FPTLTKKNP 149 (540)
T ss_dssp SCSHHHHHTTCSEEEEC--TTSSCHHHHHHHH---CTTSEEEEEECSHHHHHHHHHTCC--CCEEEESCC-SCCCCCC--
T ss_pred CcHHHHHHcCCCEEEEC--hhhcCHHHHHHHh---CCCCEEEEECCCHHHHHHHHHcCCCCCCEEEEcCC-CCCCCCCCc
Q ss_pred H-----HHHHHHHHHHHHHc---CCceEEEehhhHhhhcCCCCChHhHHHHHHHHH--------hccceEEeccccCCCC
Q 008112 359 V-----PLLQEEIIRTCRSM---GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVR--------EGADAVMLSGETAHGK 422 (577)
Q Consensus 359 v-----~~~qk~Ii~~c~~a---GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~--------~G~D~imLs~ETa~G~ 422 (577)
- +...+++.+.+++. .+|++. +-.-.|.. +...+. .|+|++.+.+.-..-.
T Consensus 150 ~~~~~G~~~l~~i~~~~~~~~~~~iPvvA--------IGGI~~~n-----i~~v~~~~~~~g~~~GadgvAVvsaI~~a~ 216 (540)
T 3nl6_A 150 KKAPMGTAGAIRVLDALERNNAHWCRTVG--------IGGLHPDN-----IERVLYQCVSSNGKRSLDGICVVSDIIASL 216 (540)
T ss_dssp --CCCHHHHHHHHHHHHHHTTCTTCEEEE--------ESSCCTTT-----HHHHHHHCBCTTSSCBCSCEEESHHHHTCT
T ss_pred CCCCCCHHHHHHHHHHHHhhccCCCCEEE--------EcCCCHHH-----HHHHHHhhcccccccCceEEEEeHHHhcCC
Q ss_pred CHHHHHHHHHHHHH
Q 008112 423 FPLKAVKVMHTVSL 436 (577)
Q Consensus 423 yP~eaV~~m~~I~~ 436 (577)
-|.++++.+.+++.
T Consensus 217 dp~~a~~~l~~~~~ 230 (540)
T 3nl6_A 217 DAAKSTKILRGLID 230 (540)
T ss_dssp THHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
No 322
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=36.78 E-value=1.2e+02 Score=34.00 Aligned_cols=99 Identities=12% Similarity=0.096 Sum_probs=70.3
Q ss_pred CccCHHHHHHHHhcCCCEEEEcCCC------------CHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh---
Q 008112 275 TEKDWDDIKFGVDNKVDFYAVSFVK------------DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--- 339 (577)
Q Consensus 275 tekD~~dI~~al~~gvD~I~~SfV~------------sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~--- 339 (577)
++.-++-|.||.++|.++|.+--=- ...|+.+|.+|.+++ .+.|+.-.|+..--+++++.++.
T Consensus 308 ~~~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~k--gV~i~lw~~~~~~~~~~~~~~~~~~~ 385 (641)
T 3a24_A 308 NPTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASK--NVGIILWAGYHAFERDMENVCRHYAE 385 (641)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHHT--TCEEEEEEEHHHHHTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHhc--CCEEEEEeeCcchHHHHHHHHHHHHH
Confidence 4445788999999999999862110 124799999999875 46777777775434457777764
Q ss_pred --cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEE
Q 008112 340 --SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIV 379 (577)
Q Consensus 340 --sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ 379 (577)
++||-++=- +-.-..+-....++++.|.+++.-|.+
T Consensus 386 ~Gv~gvK~Df~----~~~~Q~~v~~y~~i~~~aA~~~l~V~f 423 (641)
T 3a24_A 386 MGVKGFKVDFM----DRDDQEMTAFNYRAAEMCAKYKLILDL 423 (641)
T ss_dssp HTCCEEEEECC----CCCSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCEEEECCC----CCCcHHHHHHHHHHHHHHHHcCCEEEc
Confidence 889988621 111146667778999999999987765
No 323
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=36.70 E-value=67 Score=32.48 Aligned_cols=64 Identities=14% Similarity=0.127 Sum_probs=48.5
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEE--eecChhhHhhHHHHHHh-cCEEEEcC
Q 008112 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITA-SDGAMVAR 347 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~Iia--KIEt~~gv~NldeIl~~-sDGImIaR 347 (577)
.+.++.+++.|+|+|.+... ++++++++++.+.....+++|.+ -| -.+|+.++++. +|+|-++.
T Consensus 207 lee~~~A~~aGaD~I~ld~~-~~~~l~~~v~~l~~~~~~~~I~ASGGI----t~~ni~~~~~aGaD~i~vGs 273 (299)
T 2jbm_A 207 LQEAVQAAEAGADLVLLDNF-KPEELHPTATVLKAQFPSVAVEASGGI----TLDNLPQFCGPHIDVISMGM 273 (299)
T ss_dssp HHHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHHHHCTTSEEEEESSC----CTTTHHHHCCTTCCEEECTH
T ss_pred HHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCeeEEEECCC----CHHHHHHHHHCCCCEEEECh
Confidence 46678888999999999874 68999998888875445566555 23 23688888877 89998874
No 324
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=36.64 E-value=34 Score=34.38 Aligned_cols=20 Identities=35% Similarity=0.483 Sum_probs=18.5
Q ss_pred HHHHHHHHHhCCcEEEEecc
Q 008112 123 REMIWKLAEAGMNVARLNMS 142 (577)
Q Consensus 123 ~e~l~~li~~Gm~v~RiN~s 142 (577)
.+.++.|.+.|+|++|+-++
T Consensus 47 ~~~~~~~~~~G~n~vRi~~~ 66 (358)
T 1ece_A 47 RSMLDQIKSLGYNTIRLPYS 66 (358)
T ss_dssp HHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeecc
Confidence 67899999999999999987
No 325
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=36.51 E-value=1.6e+02 Score=29.32 Aligned_cols=105 Identities=15% Similarity=0.192 Sum_probs=65.4
Q ss_pred CEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhH-------------------hhHHHHHHh--cCEEEEcCCC
Q 008112 291 DFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSI-------------------PNLHSIITA--SDGAMVARGD 349 (577)
Q Consensus 291 D~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv-------------------~NldeIl~~--sDGImIaRGD 349 (577)
..++.|| +.+.+.++++. ..++.+..-.+....+ .++.+.++. +|++-..-
T Consensus 182 ~v~i~SF--~~~~l~~~~~~----~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-- 253 (313)
T 3l12_A 182 RTVMHSF--DWALLGECRRQ----APDLPTSYLSQLPENADDPGEDSAKPVGPDYDRMTESLPQAVASAGGQLWCPYF-- 253 (313)
T ss_dssp GEEEEES--CHHHHHHHHHH----CTTSCEEEEECCCC-------------CCCTTTCCSCHHHHHHHHTCSEEEEBG--
T ss_pred CEEEEcC--CHHHHHHHHHH----CCCCcEEEEeccccccccccccccccccccchhccccHHHHHHHhCCcEEecch--
Confidence 4677788 56777777664 3455555544443211 122333332 45544321
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHH
Q 008112 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVK 429 (577)
Q Consensus 350 Lg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~ 429 (577)
..+-+..++.|+++|++|.+=|- + +-.++..++..|+|+|+- +||-.+.+
T Consensus 254 ----------~~~~~~~v~~~~~~Gl~V~~WTV--n-----------~~~~~~~l~~~GVDgIiT-------D~P~~~~~ 303 (313)
T 3l12_A 254 ----------LDVTPELVAEAHDLGLIVLTWTV--N-----------EPEDIRRMATTGVDGIVT-------DYPGRTQR 303 (313)
T ss_dssp ----------GGCCHHHHHHHHHTTCEEEEBCC--C-----------SHHHHHHHHHHTCSEEEE-------SCHHHHHH
T ss_pred ----------hcCCHHHHHHHHHCCCEEEEEcC--C-----------CHHHHHHHHHcCCCEEEe-------CCHHHHHH
Confidence 12347889999999999998761 1 224567788899999985 79988887
Q ss_pred HHHH
Q 008112 430 VMHT 433 (577)
Q Consensus 430 ~m~~ 433 (577)
++.+
T Consensus 304 ~l~~ 307 (313)
T 3l12_A 304 ILID 307 (313)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7653
No 326
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=36.50 E-value=1.5e+02 Score=28.00 Aligned_cols=68 Identities=16% Similarity=0.172 Sum_probs=41.4
Q ss_pred CHHHH-HHHHhcCCCEEEEc-----CCCCHHHHHHHHHHHHhcCCCceEEEe--ecChhhHhhHHHHHHh-cCEEEEcCC
Q 008112 278 DWDDI-KFGVDNKVDFYAVS-----FVKDAQVVHELKNYLKSCGADIHVIVK--IESADSIPNLHSIITA-SDGAMVARG 348 (577)
Q Consensus 278 D~~dI-~~al~~gvD~I~~S-----fV~sa~dv~~lr~~l~~~~~~i~IiaK--IEt~~gv~NldeIl~~-sDGImIaRG 348 (577)
|...+ +...+.|+|+|.+. |.....+...+++..+ ..++++++. |.++ +.+++.++. +|+|++++.
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~--~~~ipvi~~ggI~~~---~~~~~~~~~Gad~V~lg~~ 105 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAE--QIDIPFTVGGGIHDF---ETASELILRGADKVSINTA 105 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHT--TCCSCEEEESSCCSH---HHHHHHHHTTCSEEEESHH
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHH--hCCCCEEEeCCCCCH---HHHHHHHHcCCCEEEEChH
Confidence 54443 45567899998765 3323344444444432 235677764 6554 456666665 999999977
Q ss_pred Cc
Q 008112 349 DL 350 (577)
Q Consensus 349 DL 350 (577)
.|
T Consensus 106 ~l 107 (253)
T 1thf_D 106 AV 107 (253)
T ss_dssp HH
T ss_pred HH
Confidence 66
No 327
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=36.48 E-value=2.7e+02 Score=25.98 Aligned_cols=40 Identities=10% Similarity=0.048 Sum_probs=29.3
Q ss_pred HHHHHHHHhcCCCEEEEcCC------CCHHHHHHHHHHHHhcCCCc
Q 008112 279 WDDIKFGVDNKVDFYAVSFV------KDAQVVHELKNYLKSCGADI 318 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV------~sa~dv~~lr~~l~~~~~~i 318 (577)
.+.++.+.+.|+|+|=+..- .+..++.++++.+.+.|-.+
T Consensus 22 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~ 67 (272)
T 2q02_A 22 EAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEI 67 (272)
T ss_dssp HHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeE
Confidence 35568888999999988632 14567888999888776544
No 328
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=36.48 E-value=1.9e+02 Score=29.33 Aligned_cols=111 Identities=16% Similarity=0.221 Sum_probs=65.5
Q ss_pred HHHHHhcCCCEEEEc---------------CCCCHHHHHHHHHHHHhcCCCceEEEeecCh------hhHhhHHHHHHh-
Q 008112 282 IKFGVDNKVDFYAVS---------------FVKDAQVVHELKNYLKSCGADIHVIVKIESA------DSIPNLHSIITA- 339 (577)
Q Consensus 282 I~~al~~gvD~I~~S---------------fV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~------~gv~NldeIl~~- 339 (577)
++...+.|+++|-+= -+...+-+..++..... +.+..|+++.|.. ++++......++
T Consensus 110 v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A-~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAG 188 (305)
T 3ih1_A 110 AVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV-APSLYIVARTDARGVEGLDEAIERANAYVKAG 188 (305)
T ss_dssp HHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH-CTTSEEEEEECCHHHHCHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc-CCCeEEEEeeccccccCHHHHHHHHHHHHHcC
Confidence 344456777777431 11223456666655544 7889999999986 455555555555
Q ss_pred cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEe
Q 008112 340 SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML 414 (577)
Q Consensus 340 sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imL 414 (577)
+|+||+- ... . ...+-+.|++..+|++. +|++- -..|.++.+|.. ..|+..+..
T Consensus 189 AD~i~~e-------~~~-~----~~~~~~i~~~~~~P~~~--n~~~~-g~tp~~~~~eL~------~lGv~~v~~ 242 (305)
T 3ih1_A 189 ADAIFPE-------ALQ-S----EEEFRLFNSKVNAPLLA--NMTEF-GKTPYYSAEEFA------NMGFQMVIY 242 (305)
T ss_dssp CSEEEET-------TCC-S----HHHHHHHHHHSCSCBEE--ECCTT-SSSCCCCHHHHH------HTTCSEEEE
T ss_pred CCEEEEc-------CCC-C----HHHHHHHHHHcCCCEEE--eecCC-CCCCCCCHHHHH------HcCCCEEEE
Confidence 9999983 221 1 23445556777899863 33322 123556665543 468887765
No 329
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=36.47 E-value=2.4e+02 Score=28.89 Aligned_cols=137 Identities=9% Similarity=0.055 Sum_probs=70.3
Q ss_pred hcCCC-EEEEcCC-----------CCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh--cCEE---E-----
Q 008112 287 DNKVD-FYAVSFV-----------KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGA---M----- 344 (577)
Q Consensus 287 ~~gvD-~I~~SfV-----------~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~--sDGI---m----- 344 (577)
+.|+| +|-+.+= ++++.+.++.+.+.+. .+++|++||=--.....+.++++. .|+| -
T Consensus 152 ~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~-~~~PV~vKi~p~~~~~~~a~~~~~aga~~i~~int~nt~ 230 (345)
T 3oix_A 152 ASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTY-FTKPLGIKLPPYFDIVHFDQAAAIFNXYPLTFVNCINSI 230 (345)
T ss_dssp HSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTT-CCSCEEEEECCCCCHHHHHHHHHHHTTSCCSEEEECCCE
T ss_pred ccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHH-hCCCeEEEECCCCCHHHHHHHHHHhCCCceEEEEeeccc
Confidence 35776 7766542 4556666665555432 357899999543233344444443 4433 1
Q ss_pred -----EcCCCcc----CCC----CCCcHHHHHHHHHHHHHHc--CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhcc
Q 008112 345 -----VARGDLG----AEL----PIEEVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGA 409 (577)
Q Consensus 345 -----IaRGDLg----~el----g~e~v~~~qk~Ii~~c~~a--GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~ 409 (577)
|.+.-.. .+. |....+...+.+-+..++. ..|+|....+. | ..|+..++..|+
T Consensus 231 g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~---------s---~~da~~~l~aGA 298 (345)
T 3oix_A 231 GNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGGVX---------T---GRDAFEHILCGA 298 (345)
T ss_dssp EEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESSCC---------S---HHHHHHHHHHTC
T ss_pred ccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECCCC---------C---hHHHHHHHHhCC
Confidence 2211110 011 1112333344444444444 48888654432 2 357888889999
Q ss_pred ceEEeccccCCCCCHHHHHHHHHHHHHHHhcc
Q 008112 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRTEAT 441 (577)
Q Consensus 410 D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~ 441 (577)
|+||+..--..+ -| .++.+|.+..+..
T Consensus 299 d~V~igra~~~~-gP----~~~~~i~~~L~~~ 325 (345)
T 3oix_A 299 SMVQIGTALHQE-GP----QIFKRITKELXAI 325 (345)
T ss_dssp SEEEESHHHHHH-CT----HHHHHHHHHHHHH
T ss_pred CEEEEChHHHhc-Ch----HHHHHHHHHHHHH
Confidence 999996331111 13 3445555555544
No 330
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=36.42 E-value=1.1e+02 Score=29.46 Aligned_cols=66 Identities=12% Similarity=0.173 Sum_probs=46.4
Q ss_pred HHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 304 VHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 304 v~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
++.+++.+.+.|.++.+.+.-+... -+|+++++.-.|.|+.+-++ +.....+...|++.|+|.+.+
T Consensus 87 a~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~----------~~~~~~l~~~~~~~~~p~i~~ 152 (249)
T 1jw9_B 87 VESARDALTRINPHIAITPVNALLD-DAELAALIAEHDLVLDCTDN----------VAVRNQLNAGCFAAKVPLVSG 152 (249)
T ss_dssp HHHHHHHHHHHCTTSEEEEECSCCC-HHHHHHHHHTSSEEEECCSS----------HHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHCCCcEEEEEeccCC-HhHHHHHHhCCCEEEEeCCC----------HHHHHHHHHHHHHcCCCEEEe
Confidence 4555666766677777655443333 25788888889999987322 346677889999999999875
No 331
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=36.31 E-value=92 Score=32.41 Aligned_cols=94 Identities=13% Similarity=0.144 Sum_probs=54.4
Q ss_pred HHHHHHhcCCCEEEEc-------CCCCHHHHHHHHHHHHhcCCCceEEEeec---ChhhHhhHHHHHHh-cCEEEEcCCC
Q 008112 281 DIKFGVDNKVDFYAVS-------FVKDAQVVHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGD 349 (577)
Q Consensus 281 dI~~al~~gvD~I~~S-------fV~sa~dv~~lr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDGImIaRGD 349 (577)
.+++-++.|+|+|.+. .....|-.+-++...+..+.+++||+-+= |.++++....-.+. +|++|+-.-.
T Consensus 85 lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~Py 164 (360)
T 4dpp_A 85 LVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPY 164 (360)
T ss_dssp HHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 3467788999999873 22223333334444555577899999763 45555555554444 8999986543
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 350 Lg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
+.- .+.+.+...-+.|.+ + .|+++.
T Consensus 165 Y~k-~sq~gl~~hf~~IA~---a--~PiilY 189 (360)
T 4dpp_A 165 YGK-TSIEGLIAHFQSVLH---M--GPTIIY 189 (360)
T ss_dssp SSC-CCHHHHHHHHHTTGG---G--SCEEEE
T ss_pred CCC-CCHHHHHHHHHHHHH---h--CCEEEE
Confidence 321 222344444444443 2 588765
No 332
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=36.29 E-value=2.5e+02 Score=26.32 Aligned_cols=104 Identities=6% Similarity=-0.049 Sum_probs=58.5
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh----cCEEEEcCCCccCCC
Q 008112 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA----SDGAMVARGDLGAEL 354 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~----sDGImIaRGDLg~el 354 (577)
.++++.+++.|+|||..|. .+.+-++..+. . | +.++.-+. +..|+.++ +|.+.+-++. .+
T Consensus 73 ~d~~~~A~~~GAd~v~~~~-~d~~v~~~~~~-~---g--~~~i~G~~------t~~e~~~A~~~Gad~v~~fpa~---~~ 136 (207)
T 2yw3_A 73 PKEAEAALEAGAAFLVSPG-LLEEVAALAQA-R---G--VPYLPGVL------TPTEVERALALGLSALKFFPAE---PF 136 (207)
T ss_dssp HHHHHHHHHHTCSEEEESS-CCHHHHHHHHH-H---T--CCEEEEEC------SHHHHHHHHHTTCCEEEETTTT---TT
T ss_pred HHHHHHHHHcCCCEEEcCC-CCHHHHHHHHH-h---C--CCEEecCC------CHHHHHHHHHCCCCEEEEecCc---cc
Confidence 4778889999999999884 34433333333 2 3 33444343 44454443 8998884311 11
Q ss_pred -CCCcHHHHHHHHHHHHHHc-CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEecccc
Q 008112 355 -PIEEVPLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGET 418 (577)
Q Consensus 355 -g~e~v~~~qk~Ii~~c~~a-GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ET 418 (577)
| + ...+ ..+... +.|++ |+.=+ +. .++..++..|+|++...+.-
T Consensus 137 gG---~-~~lk---~l~~~~~~ipvv-aiGGI---------~~---~n~~~~l~aGa~~vavgSai 182 (207)
T 2yw3_A 137 QG---V-RVLR---AYAEVFPEVRFL-PTGGI---------KE---EHLPHYAALPNLLAVGGSWL 182 (207)
T ss_dssp TH---H-HHHH---HHHHHCTTCEEE-EBSSC---------CG---GGHHHHHTCSSBSCEEESGG
T ss_pred cC---H-HHHH---HHHhhCCCCcEE-EeCCC---------CH---HHHHHHHhCCCcEEEEehhh
Confidence 1 1 1112 223334 67865 44433 11 35778889999999986543
No 333
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=36.14 E-value=1.7e+02 Score=28.33 Aligned_cols=38 Identities=11% Similarity=0.115 Sum_probs=25.4
Q ss_pred HHHHHHHhcCCCEEEEcCCC------CHHHHHHHHHHHHhcCCC
Q 008112 280 DDIKFGVDNKVDFYAVSFVK------DAQVVHELKNYLKSCGAD 317 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV~------sa~dv~~lr~~l~~~~~~ 317 (577)
+.++.+.+.|+|+|=+.+.. +..++.++++.+++.|-.
T Consensus 40 ~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 83 (296)
T 2g0w_A 40 KRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMK 83 (296)
T ss_dssp HHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCE
T ss_pred HHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCc
Confidence 45688889999999887521 224566677777665543
No 334
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=35.87 E-value=3.1e+02 Score=27.02 Aligned_cols=118 Identities=12% Similarity=0.057 Sum_probs=68.4
Q ss_pred HHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhccccC
Q 008112 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (577)
Q Consensus 365 ~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~~ 444 (577)
-+...|+..|.++++-. |....-..+...-..|++.+... |.| .++.+...++..+ +..++.
T Consensus 68 alA~~a~~~G~~~~i~~-----------p~~~~~~k~~~~~~~Ga~V~~~~-----~~~-~~~~~~a~~~~~~-~~~~~~ 129 (318)
T 2rkb_A 68 AAAYAARKLGIPATIVL-----------PESTSLQVVQRLQGEGAEVQLTG-----KVW-DEANLRAQELAKR-DGWENV 129 (318)
T ss_dssp HHHHHHHHHTCCEEEEE-----------CTTCCHHHHHHHHHTTCEEEECC-----SSH-HHHHHHHHHHHHS-TTEEEC
T ss_pred HHHHHHHHcCCCEEEEE-----------CCCCcHHHHHHHHhcCCEEEEEC-----CCH-HHHHHHHHHHHHh-cCCEEe
Confidence 35677899999987642 11111234555666899877753 233 4666665555443 111111
Q ss_pred CCCCCCCCcccCCChhHHHHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHhh-----CCCCeEEEEcCcH
Q 008112 445 GAMPPNLGQAFKNHMSEMFAYHATMMSNTLG--T-SIVVFTRTGFMAILLSHY-----RPSGTIFAFTNEK 507 (577)
Q Consensus 445 ~~~~~~l~~~~~~~~~~~ia~~a~~~a~~~~--a-aIiV~T~sG~tA~~is~~-----RP~~PIIAvT~~~ 507 (577)
.+ +.+ ......-..-+.++.++++ . .||+.+-+|.++--++++ .|...||++.+..
T Consensus 130 ~~-~~n------~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~ 193 (318)
T 2rkb_A 130 PP-FDH------PLIWKGHASLVQELKAVLRTPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAMETHG 193 (318)
T ss_dssp CS-SCS------HHHHHHHHHHHHHHHHHSSSCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEEEEETT
T ss_pred CC-CCC------hhhccchhHHHHHHHHhcCCCCCEEEEeeCCCcHHHHHHHHHHHhCCCCCEEEEEecCC
Confidence 11 111 0112222334456667764 4 799999999998776653 3889999999863
No 335
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=35.60 E-value=2.2e+02 Score=28.36 Aligned_cols=119 Identities=13% Similarity=0.114 Sum_probs=70.7
Q ss_pred HHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhcccc
Q 008112 364 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATIT 443 (577)
Q Consensus 364 k~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~ 443 (577)
.-+...|+..|.++++-.. ....-..+...-..|++.+...+. | .++.+...+++.+-. .++
T Consensus 87 ~alA~~a~~~G~~~~iv~p-----------~~~~~~k~~~~~~~GA~V~~~~~~-----~-~~~~~~a~~l~~~~~-~~~ 148 (323)
T 1v71_A 87 QAIALSAKILGIPAKIIMP-----------LDAPEAKVAATKGYGGQVIMYDRY-----K-DDREKMAKEISEREG-LTI 148 (323)
T ss_dssp HHHHHHHHHTTCCEEEEEE-----------TTCCHHHHHHHHHTTCEEEEECTT-----T-TCHHHHHHHHHHHHT-CBC
T ss_pred HHHHHHHHHcCCCEEEECC-----------CCCcHHHHHHHHHcCCEEEEECCC-----H-HHHHHHHHHHHHhcC-CEe
Confidence 3466779999999876421 111122455666789998866532 2 245666666554432 221
Q ss_pred CCCCCCCCCcccCCChhHHHHHHHHHHHhhcC-c-eEEEEcCChHHHHHHHh----hCCCCeEEEEcCcH
Q 008112 444 GGAMPPNLGQAFKNHMSEMFAYHATMMSNTLG-T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTNEK 507 (577)
Q Consensus 444 ~~~~~~~l~~~~~~~~~~~ia~~a~~~a~~~~-a-aIiV~T~sG~tA~~is~----~RP~~PIIAvT~~~ 507 (577)
..+ |.+ + ........-+.++.++++ . .||+.+-+|.|+--+++ +.|...||++.+..
T Consensus 149 i~~-~~n---~---~~~~g~~t~~~Ei~~q~~~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigve~~~ 211 (323)
T 1v71_A 149 IPP-YDH---P---HVLAGQGTAAKELFEEVGPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEPEA 211 (323)
T ss_dssp CCS-SSS---H---HHHHHHTHHHHHHHHHHCCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGG
T ss_pred cCC-CCC---c---chhhhHhHHHHHHHHhcCCCCEEEEecCCcHHHHHHHHHHHHcCCCCEEEEEEeCC
Confidence 111 111 0 112222334566777765 4 89999999998776665 46999999999864
No 336
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=35.52 E-value=64 Score=32.42 Aligned_cols=68 Identities=22% Similarity=0.284 Sum_probs=49.0
Q ss_pred CcEEEEecCCCC---------CCHH----HHHHHHHhCCcEEEEec-cC--C-----ChHHHHHHHHHHHHHHHhcCCCe
Q 008112 109 KTKIVCTIGPST---------NTRE----MIWKLAEAGMNVARLNM-SH--G-----DHASHQKVIDLVKEYNAQSKDNV 167 (577)
Q Consensus 109 ~tKIi~TiGPs~---------~~~e----~l~~li~~Gm~v~RiN~-sH--g-----~~e~~~~~i~~ir~~~~~~~~~~ 167 (577)
+++|++=|-+.- .+.+ ..++|+++|+++.=+|. |- | ..|++.+++..|+.+.++++
T Consensus 14 ~~~imGilN~TpdSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~--- 90 (282)
T 1aj0_A 14 HPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFE--- 90 (282)
T ss_dssp SCEEEEEEECCTTTSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCC---
T ss_pred CCEEEEEEeCCCCccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcC---
Confidence 567777775532 1233 35779999999999998 42 2 16889999999998877654
Q ss_pred eEEEeecCCCee
Q 008112 168 IAIMLDTKGPEV 179 (577)
Q Consensus 168 i~I~~Dl~Gpki 179 (577)
+.|.+|+.-|++
T Consensus 91 ~piSIDT~~~~v 102 (282)
T 1aj0_A 91 VWISVDTSKPEV 102 (282)
T ss_dssp CEEEEECCCHHH
T ss_pred CeEEEeCCCHHH
Confidence 567889776654
No 337
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=35.36 E-value=90 Score=32.14 Aligned_cols=46 Identities=11% Similarity=0.234 Sum_probs=34.8
Q ss_pred HHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHHHHHhcCCCeeEEEeec
Q 008112 125 MIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDT 174 (577)
Q Consensus 125 ~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl 174 (577)
..+++.++|.+.+.++..|++.+.-.+.++.+|++ +| ..+.|++|.
T Consensus 146 ~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a---~G-~d~~l~vDa 191 (382)
T 2gdq_A 146 NVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHT---AG-SSITMILDA 191 (382)
T ss_dssp HHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHH---HC-TTSEEEEEC
T ss_pred HHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHh---hC-CCCEEEEEC
Confidence 34567789999999999998888777888888765 34 345666775
No 338
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=35.19 E-value=2.5e+02 Score=27.92 Aligned_cols=123 Identities=11% Similarity=0.059 Sum_probs=71.9
Q ss_pred HHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhccccC
Q 008112 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (577)
Q Consensus 365 ~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~~ 444 (577)
-+...|+..|.++++-. |.......+...-..|++.+...++. .| .++.+...+++.+-...++.
T Consensus 81 alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~~~~i 145 (322)
T 1z7w_A 81 GLAFTAAAKGYKLIITM-----------PASMSTERRIILLAFGVELVLTDPAK---GM-KGAIAKAEEILAKTPNGYML 145 (322)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTEEEC
T ss_pred HHHHHHHHcCCCEEEEe-----------CCCCCHHHHHHHHHcCCEEEEeCCCC---CH-HHHHHHHHHHHHhCCCeEeC
Confidence 45677889999987642 22222334556667899987654321 12 35666666665544222221
Q ss_pred CCCCCCCCcccCCChhHHHHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHh----hCCCCeEEEEcCcHH
Q 008112 445 GAMPPNLGQAFKNHMSEMFAYHATMMSNTLG--T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTNEKR 508 (577)
Q Consensus 445 ~~~~~~l~~~~~~~~~~~ia~~a~~~a~~~~--a-aIiV~T~sG~tA~~is~----~RP~~PIIAvT~~~~ 508 (577)
.+ |.+ +. .+......-+.++.++++ . .||+.+-+|.+.--+++ ..|...|+++.+...
T Consensus 146 ~~-~~n---~~--~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~ 210 (322)
T 1z7w_A 146 QQ-FEN---PA--NPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVES 210 (322)
T ss_dssp CT-TTC---TH--HHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGG
T ss_pred CC-CCC---hh--HHHHHHHHHHHHHHHHhcCCCCEEEEecCccHhHHHHHHHHHHcCCCCEEEEEecCCC
Confidence 11 111 00 011112223467777774 4 89999999998766665 479999999998653
No 339
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=35.19 E-value=52 Score=35.34 Aligned_cols=120 Identities=13% Similarity=0.137 Sum_probs=69.3
Q ss_pred CCCCCCc-cCHHHHHHHHhcCCCEEEEcCC---CCHHHHHHHHHHHHhcCCCceEEE--eecChhhHhhHHHHHHhcCEE
Q 008112 270 TLPSITE-KDWDDIKFGVDNKVDFYAVSFV---KDAQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITASDGA 343 (577)
Q Consensus 270 ~lp~lte-kD~~dI~~al~~gvD~I~~SfV---~sa~dv~~lr~~l~~~~~~i~Iia--KIEt~~gv~NldeIl~~sDGI 343 (577)
.+..|.| ++.++++.|++.|+|+|.+..- ...-|+....+++.....++.+|+ -|-|++-+..+ .+.+||+
T Consensus 157 gm~~LvEvh~~eE~~~A~~lga~iIGinnr~L~t~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~---~~~a~av 233 (452)
T 1pii_A 157 EMGVLTEVSNEEEQERAIALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGINTYAQVREL---SHFANGF 233 (452)
T ss_dssp TCEEEEEECSHHHHHHHHHTTCSEEEEESEETTTTEECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHH---TTTCSEE
T ss_pred CCeEEEEeCCHHHHHHHHHCCCCEEEEeCCCCCCCCCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHH---HHhCCEE
Confidence 4444544 6789999999999999998631 112234444444444445667776 35555433333 2238999
Q ss_pred EEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 344 MVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 344 mIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
.||-+= |-.++....-++++. ..-|-|++ |+ ..|+..++..|+|++=+-
T Consensus 234 LVGeal----mr~~d~~~~~~~l~~---~~~KICGi--------------t~--~eda~~a~~~Gad~iGfI 282 (452)
T 1pii_A 234 LIGSAL----MAHDDLHAAVRRVLL---GENKVCGL--------------TR--GQDAKAAYDAGAIYGGLI 282 (452)
T ss_dssp EECHHH----HTCSCHHHHHHHHHH---CSCEECCC--------------CS--HHHHHHHHHHTCSEEEEE
T ss_pred EEcHHH----cCCcCHHHHHHHHHH---HhccccCC--------------Cc--HHHHHHHHhcCCCEEEee
Confidence 998221 122334444444442 22333443 33 457888899999987664
No 340
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=34.87 E-value=55 Score=33.54 Aligned_cols=67 Identities=6% Similarity=-0.030 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh--cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceE
Q 008112 301 AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVI 378 (577)
Q Consensus 301 a~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~--sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi 378 (577)
.+...++++.+ .++|++ =|+....+.+.++++. +|+|++.++-+|- + .--.+++..|+++|.++.
T Consensus 231 ~~~~~~l~~~~-----~iPI~~-dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG------i-~~~~~i~~~A~~~gi~~~ 297 (371)
T 2ovl_A 231 LVGNARIVRES-----GHTIAG-GENLHTLYDFHNAVRAGSLTLPEPDVSNIGG------Y-TTFRKVAALAEANNMLLT 297 (371)
T ss_dssp HHHHHHHHHHH-----CSCEEE-CTTCCSHHHHHHHHHHTCCSEECCCTTTTTS------H-HHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHhhC-----CCCEEe-CCCCCCHHHHHHHHHcCCCCEEeeCccccCC------H-HHHHHHHHHHHHcCCeEc
Confidence 44555555543 355544 5777777788888765 8999987544432 2 333568899999999988
Q ss_pred EE
Q 008112 379 VA 380 (577)
Q Consensus 379 ~A 380 (577)
+-
T Consensus 298 ~h 299 (371)
T 2ovl_A 298 SH 299 (371)
T ss_dssp EC
T ss_pred cc
Confidence 73
No 341
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=34.61 E-value=1.8e+02 Score=29.72 Aligned_cols=119 Identities=13% Similarity=0.068 Sum_probs=69.2
Q ss_pred HHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhcccc
Q 008112 364 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATIT 443 (577)
Q Consensus 364 k~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~ 443 (577)
.-+...|+..|.++++-. |..+....+...-..|++.+...+ .| -++.+...+++.+-...++
T Consensus 106 ~alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~Vv~v~~-----~~-~~a~~~a~~l~~~~~~~~~ 168 (364)
T 4h27_A 106 MAAAYAARQLGVPATIVV-----------PGTTPALTIERLKNEGATVKVVGE-----LL-DEAFELAKALAKNNPGWVY 168 (364)
T ss_dssp HHHHHHHHHHTCCEEEEE-----------ETTSCHHHHHHHHTTTCEEEEECS-----ST-THHHHHHHHHHHHSTTEEE
T ss_pred HHHHHHHHHhCCceEEEE-----------CCCCCHHHHHHHHHcCCEEEEECC-----CH-HHHHHHHHHHHHhCCCeEE
Confidence 346677899999987642 222222345556668998876642 33 3677777666554312222
Q ss_pred CCCCCCCCCcccCCChhHHHHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHh----hC-CCCeEEEEcCc
Q 008112 444 GGAMPPNLGQAFKNHMSEMFAYHATMMSNTLG--T-SIVVFTRTGFMAILLSH----YR-PSGTIFAFTNE 506 (577)
Q Consensus 444 ~~~~~~~l~~~~~~~~~~~ia~~a~~~a~~~~--a-aIiV~T~sG~tA~~is~----~R-P~~PIIAvT~~ 506 (577)
..+ |.+ + .....-..-+.++.++++ . .||+.+-+|.++--+++ +. |.++||++-++
T Consensus 169 ~~~-~~n---p---~~~~G~~t~~~Ei~~q~~~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vigVe~~ 232 (364)
T 4h27_A 169 IPP-FDD---P---LIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAMETF 232 (364)
T ss_dssp ECS-SCS---H---HHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEET
T ss_pred eCC-CCC---H---HHHHHHHHHHHHHHHHhCCCCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 111 111 0 111222223456777764 4 79999999988666554 33 88999999764
No 342
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=34.61 E-value=65 Score=31.71 Aligned_cols=88 Identities=11% Similarity=0.075 Sum_probs=47.0
Q ss_pred HHHHHHHhcCCCEEEEcC--------CCCH--------------H----HHHHHHHHHHhcCCCceEEE--eecChhhHh
Q 008112 280 DDIKFGVDNKVDFYAVSF--------VKDA--------------Q----VVHELKNYLKSCGADIHVIV--KIESADSIP 331 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~Sf--------V~sa--------------~----dv~~lr~~l~~~~~~i~Iia--KIEt~~gv~ 331 (577)
+.++.+.+.|+|+|.++- .++. . .+..+++. .+. .+++||+ -|-|.+
T Consensus 180 ~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i-~~~-~~ipvia~GGI~~~~--- 254 (311)
T 1ep3_A 180 PIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQV-AQD-VDIPIIGMGGVANAQ--- 254 (311)
T ss_dssp HHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHH-HTT-CSSCEEECSSCCSHH---
T ss_pred HHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHH-HHh-cCCCEEEECCcCCHH---
Confidence 445677889999999852 2211 0 12222222 221 2677777 354433
Q ss_pred hHHHHHHh-cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCC
Q 008112 332 NLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGK 375 (577)
Q Consensus 332 NldeIl~~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGK 375 (577)
++.+.++. +|++++||+=|. +.+-+..+.+.+-......|.
T Consensus 255 d~~~~l~~GAd~V~vg~~~l~---~p~~~~~i~~~l~~~~~~~g~ 296 (311)
T 1ep3_A 255 DVLEMYMAGASAVAVGTANFA---DPFVCPKIIDKLPELMDQYRI 296 (311)
T ss_dssp HHHHHHHHTCSEEEECTHHHH---CTTHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEECHHHHc---CcHHHHHHHHHHHHHHHHcCC
Confidence 33444433 999999998665 334444444444443444444
No 343
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=34.60 E-value=34 Score=36.16 Aligned_cols=43 Identities=28% Similarity=0.380 Sum_probs=33.8
Q ss_pred EecCCCCCCHHHHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHH
Q 008112 114 CTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKE 158 (577)
Q Consensus 114 ~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~ 158 (577)
+.+|+.. .+.++.++++|++++=|+.+||..+.+.++++.+|+
T Consensus 139 ~~v~~~~--~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~ 181 (400)
T 3ffs_A 139 AAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS 181 (400)
T ss_dssp EEECCC---CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHT
T ss_pred eecCCCH--HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHh
Confidence 3455543 789999999999999999999988777777766663
No 344
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=34.60 E-value=1e+02 Score=32.01 Aligned_cols=55 Identities=18% Similarity=0.162 Sum_probs=34.5
Q ss_pred CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccC-----CCCCHHHHHHHHHHHHHHHhccc
Q 008112 374 GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETA-----HGKFPLKAVKVMHTVSLRTEATI 442 (577)
Q Consensus 374 GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa-----~G~yP~eaV~~m~~I~~~aE~~~ 442 (577)
..|+|....+- --.|++.++..|+|++++..--- .| +....+++..+.++.+..+
T Consensus 278 ~ipvia~GGI~------------~g~Dv~KaLalGAdaV~ig~~~l~a~~~~G--~~~v~~~l~~l~~eL~~~m 337 (365)
T 3sr7_A 278 KVEILASGGIR------------HPLDIIKALVLGAKAVGLSRTMLELVEQHS--VHEVIAIVNGWKEDLRLIM 337 (365)
T ss_dssp TSEEEECSSCC------------SHHHHHHHHHHTCSEEEESHHHHHHHHHSC--HHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEeCCCC------------CHHHHHHHHHcCCCEEEECHHHHHHHHhcC--hHHHHHHHHHHHHHHHHHH
Confidence 56877654433 24689999999999999863111 11 2233456667766666554
No 345
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=34.58 E-value=66 Score=32.52 Aligned_cols=57 Identities=11% Similarity=0.032 Sum_probs=34.3
Q ss_pred CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCC--CHHHHHHHHHHHHHHHhccc
Q 008112 374 GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGK--FPLKAVKVMHTVSLRTEATI 442 (577)
Q Consensus 374 GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~--yP~eaV~~m~~I~~~aE~~~ 442 (577)
++|+|....+- .-.|+..++..|+|++++..---.+. =+.-.-+++..+.++.+..+
T Consensus 256 ~ipvia~GGI~------------~~~d~~kal~~GAd~V~igr~~l~~~~~G~~gv~~~~~~l~~el~~~m 314 (332)
T 1vcf_A 256 HLPLVASGGVY------------TGTDGAKALALGADLLAVARPLLRPALEGAERVAAWIGDYLEELRTAL 314 (332)
T ss_dssp SSCEEEESSCC------------SHHHHHHHHHHTCSEEEECGGGHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCC------------CHHHHHHHHHhCCChHhhhHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 68988765533 24678899999999999864322100 01222355666666666543
No 346
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=34.53 E-value=1.5e+02 Score=28.32 Aligned_cols=104 Identities=14% Similarity=0.168 Sum_probs=63.8
Q ss_pred CEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh--cCEEEEcCCCccCCCCCCcHHHH-HHHHH
Q 008112 291 DFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGAMVARGDLGAELPIEEVPLL-QEEII 367 (577)
Q Consensus 291 D~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~--sDGImIaRGDLg~elg~e~v~~~-qk~Ii 367 (577)
..++.|| +.+.+..+++. ..++.+..-.+.... ..+.+.. +|++-+ ....+ -...+
T Consensus 129 ~v~i~Sf--~~~~l~~~~~~----~p~~~~~~l~~~~~~---~~~~~~~~~~~~i~~------------~~~~~~~~~~v 187 (248)
T 1zcc_A 129 DTFYFSF--SEEMRQGLQSI----APEFRRMMTLDIAKS---PSLVGAVHHASIIEI------------TPAQMRRPGII 187 (248)
T ss_dssp TEEEECS--CHHHHHHHHHH----CTTSEEEEEHHHHSS---THHHHHTTCCSEEEE------------CHHHHHSHHHH
T ss_pred CEEEEEC--CHHHHHHHHHH----CCCCcEEEEecCCcc---HHHHHHHcCCCEEEe------------cHHHhCCHHHH
Confidence 4666777 56666666553 345554443332211 1223322 445433 23445 57899
Q ss_pred HHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhccceEEeccccCCCCCHHHHHHHHHHHH
Q 008112 368 RTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSGETAHGKFPLKAVKVMHTVS 435 (577)
Q Consensus 368 ~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~D~imLs~ETa~G~yP~eaV~~m~~I~ 435 (577)
+.++++|++|.+-|- + + -.++.. ++..|+|+|+- +||..+.+.+...+
T Consensus 188 ~~~~~~G~~v~~wTv------n----~---~~~~~~~l~~~GvdgIiT-------D~p~~~~~~~~~~~ 236 (248)
T 1zcc_A 188 EASRKAGLEIMVYYG------G----D---DMAVHREIATSDVDYINL-------DRPDLFAAVRSGMA 236 (248)
T ss_dssp HHHHHHTCEEEEECC------C----C---CHHHHHHHHHSSCSEEEE-------SCHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEEECC------C----C---HHHHHHHHHHcCCCEEEE-------CCHHHHHHHHHHhc
Confidence 999999999998772 1 1 234667 78889999875 68988888776543
No 347
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=34.45 E-value=1.4e+02 Score=30.88 Aligned_cols=57 Identities=12% Similarity=0.081 Sum_probs=33.4
Q ss_pred CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCC--CCHHHHHHHHHHHHHHHhccc
Q 008112 374 GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHG--KFPLKAVKVMHTVSLRTEATI 442 (577)
Q Consensus 374 GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G--~yP~eaV~~m~~I~~~aE~~~ 442 (577)
.+|+|....+- + -.|+..++..|+|++|+..---.+ .-|....+++..+..+.+..+
T Consensus 267 ~ipvia~GGI~---------~---~~d~~kal~lGA~~v~ig~~~l~~~~~G~~~v~~~l~~l~~eL~~~m 325 (368)
T 3vkj_A 267 DSFLVGSGGIR---------S---GLDAAKAIALGADIAGMALPVLKSAIEGKESLEQFFRKIIFELKAAM 325 (368)
T ss_dssp TCEEEEESSCC---------S---HHHHHHHHHHTCSEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEECCCC---------C---HHHHHHHHHcCCCEEEEcHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 37887654422 2 367999999999999996321100 013333346666666666543
No 348
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=34.21 E-value=54 Score=31.63 Aligned_cols=83 Identities=10% Similarity=0.024 Sum_probs=55.0
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceE-EEeecChhhHhhHHHHHHh-cCEEEEcCCCccCCCCC
Q 008112 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHV-IVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPI 356 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~I-iaKIEt~~gv~NldeIl~~-sDGImIaRGDLg~elg~ 356 (577)
.+..+.+.+.|+|++.+|= ..++++..+|+.+ +. ..+ ..-|=- +| .+..+.++. +|.++|||+=+..+=|.
T Consensus 125 ~~~a~~a~~~g~~GvV~sa-t~p~e~~~ir~~~---~~-~~~vtPGI~~-~g-~tp~~a~~~Gad~iVVGR~I~~A~dP~ 197 (222)
T 4dbe_A 125 DYIKNVIREISPKGIVVGG-TKLDHITQYRRDF---EK-MTIVSPGMGS-QG-GSYGDAVCAGADYEIIGRSIYNAGNPL 197 (222)
T ss_dssp HHHHHHHHHHCCSEEEECT-TCHHHHHHHHHHC---TT-CEEEECCBST-TS-BCTTHHHHHTCSEEEECHHHHTSSSHH
T ss_pred HHHHHHHHHhCCCEEEECC-CCHHHHHHHHHhC---CC-CEEEcCCccc-Cc-cCHHHHHHcCCCEEEECHHhcCCCCHH
Confidence 4556677889999998874 4578898888866 33 333 334532 22 145555544 99999999988887776
Q ss_pred CcHHHHHHHHHH
Q 008112 357 EEVPLLQEEIIR 368 (577)
Q Consensus 357 e~v~~~qk~Ii~ 368 (577)
+....++++|-.
T Consensus 198 ~aa~~i~~~i~~ 209 (222)
T 4dbe_A 198 TALRTINKIIED 209 (222)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 655555555443
No 349
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=34.12 E-value=3e+02 Score=25.75 Aligned_cols=89 Identities=11% Similarity=0.024 Sum_probs=54.7
Q ss_pred HHHHHHHHhcCCCEEEEcCC---------------CCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh----
Q 008112 279 WDDIKFGVDNKVDFYAVSFV---------------KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA---- 339 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV---------------~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~---- 339 (577)
.+.++.+.+.|+|+|=+... .+.+++.++++.+++.|-.+..+.-- ....++.+...++.
T Consensus 25 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~-~~~~~~~~~~~i~~A~~l 103 (262)
T 3p6l_A 25 TEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVY-VAEKSSDWEKMFKFAKAM 103 (262)
T ss_dssp HHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEE-CCSSTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEecc-CCccHHHHHHHHHHHHHc
Confidence 35567888999999987642 46889999999999887654433321 11233334443332
Q ss_pred -cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEE
Q 008112 340 -SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIV 379 (577)
Q Consensus 340 -sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ 379 (577)
++.|.+.+|. + ..+++...|+++|..+.+
T Consensus 104 Ga~~v~~~~~~-------~----~~~~l~~~a~~~gv~l~~ 133 (262)
T 3p6l_A 104 DLEFITCEPAL-------S----DWDLVEKLSKQYNIKISV 133 (262)
T ss_dssp TCSEEEECCCG-------G----GHHHHHHHHHHHTCEEEE
T ss_pred CCCEEEecCCH-------H----HHHHHHHHHHHhCCEEEE
Confidence 5566665541 1 225667777777766543
No 350
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=34.01 E-value=94 Score=31.41 Aligned_cols=65 Identities=9% Similarity=0.156 Sum_probs=48.1
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEee-c-ChhhHhhHHHHHHh-cCEEEEcCC
Q 008112 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKI-E-SADSIPNLHSIITA-SDGAMVARG 348 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKI-E-t~~gv~NldeIl~~-sDGImIaRG 348 (577)
+++.+...+.|+|.|++.-+.+.++++++.+.+ ++++++.+ | .....-+.+++.+. .+.|++++.
T Consensus 170 i~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~-----~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~ 237 (295)
T 1xg4_A 170 IERAQAYVEAGAEMLFPEAITELAMYRQFADAV-----QVPILANITEFGATPLFTTDELRSAHVAMALYPLS 237 (295)
T ss_dssp HHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHH-----CSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSH
T ss_pred HHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHc-----CCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChH
Confidence 334445568999999999999999999998877 35676644 3 13345678888887 889998744
No 351
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=33.99 E-value=64 Score=32.92 Aligned_cols=45 Identities=11% Similarity=0.115 Sum_probs=34.1
Q ss_pred HHHHHH-hCCcEEEEeccCCChHHHHHHHHHHHHHHHhcCCCeeEEEeec
Q 008112 126 IWKLAE-AGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDT 174 (577)
Q Consensus 126 l~~li~-~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl 174 (577)
.+++++ +|.+.+.|++.|++.+.-.+.++.+|++. + ..+.|++|.
T Consensus 150 a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g-~~~~l~vDa 195 (370)
T 1nu5_A 150 ALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAV---G-DRASVRVDV 195 (370)
T ss_dssp HHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHH---G-GGCEEEEEC
T ss_pred HHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHhc---C-CCCEEEEEC
Confidence 456777 99999999999998887778888888653 3 334566664
No 352
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=33.83 E-value=50 Score=33.47 Aligned_cols=62 Identities=16% Similarity=0.203 Sum_probs=52.2
Q ss_pred cCHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHH
Q 008112 277 KDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT 338 (577)
Q Consensus 277 kD~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~ 338 (577)
.|.+.++.-++.|+||++--++=+++.+..+++.+...|-+++|++-|==.....++.-+.+
T Consensus 161 ~d~~~Lk~Kv~aGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~~~ 222 (310)
T 3apt_A 161 ADLRHFKAKVEAGLDFAITQLFFNNAHYFGFLERARRAGIGIPILPGIMPVTSYRQLRRFTE 222 (310)
T ss_dssp HHHHHHHHHHHHHCSEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEECCCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHHcCCCCeEEEEecccCCHHHHHHHHH
Confidence 57777888899999999999999999999999999988888999998765556666666654
No 353
>1vhy_A Hypothetical protein HI0303; PSI, protein structure initiative, NEW YORK SGX research CEN structural genomics, nysgxrc; HET: MSE; 1.90A {Haemophilus influenzae} SCOP: b.122.1.2 c.116.1.5 PDB: 1nxz_A
Probab=33.82 E-value=91 Score=30.69 Aligned_cols=71 Identities=15% Similarity=0.196 Sum_probs=43.5
Q ss_pred ccCCCCEEEEeCC---eEEEEEEEEeCCeEEEEEeeCcEeccCc--eeeeCCCCCCCCCCCccCHHHHHHHHhcCCCEEE
Q 008112 220 DVEVGDMLLVDGG---MMSLLVKSKTEDSVKCEVVDGGELKSRR--HLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYA 294 (577)
Q Consensus 220 ~v~~Gd~I~idDG---~i~l~V~~v~~~~v~~~v~~gG~l~s~K--ginlp~~~~~lp~ltekD~~dI~~al~~gvD~I~ 294 (577)
-+++||.|.+-|| ....+|.+++++.+.+++..--...... .+.+ ...+|. .++-...|+.+.+.|++-|.
T Consensus 35 Rl~~Gd~v~l~dg~g~~~~a~I~~~~~~~~~~~i~~~~~~~~e~~~~l~L---~~al~K-~~r~e~ilqkatELGv~~I~ 110 (257)
T 1vhy_A 35 RMTEGEQLELFDGSNHIYPAKIIESNKKSVKVEILGRELADKESHLKIHL---GQVISR-GERMEFTIQKSVELGVNVIT 110 (257)
T ss_dssp CCCTTCEEEEECSSSEEEEEEEEEECSSCEEEEECCCEECCCCCSSCEEE---EEEC-----CCHHHHHHHHHTTCCEEE
T ss_pred ccCCCCEEEEEcCCCCEEEEEEEEeeCCeEEEEEEEEecccCCCCceEEE---EEecCc-hHHHHHHHHHHHhhCcCEEE
Confidence 3588999998665 4677888999998888776432111111 1111 112233 45666788999999999653
No 354
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=33.78 E-value=3e+02 Score=25.70 Aligned_cols=111 Identities=14% Similarity=0.122 Sum_probs=65.5
Q ss_pred CCCCcc--CHHH-HHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEe-----------ecChhhHhhHHHHH
Q 008112 272 PSITEK--DWDD-IKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVK-----------IESADSIPNLHSII 337 (577)
Q Consensus 272 p~ltek--D~~d-I~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaK-----------IEt~~gv~NldeIl 337 (577)
|..+.. +... .+.+.+.|++++.+ .+++.++.+++.. +++++.- |+. -.+.+++.+
T Consensus 29 p~~~~~~~~~~~~a~~~~~~G~~~i~~---~~~~~i~~i~~~~-----~~p~i~~~~~~~~~~~~~i~~--~~~~i~~~~ 98 (234)
T 1yxy_A 29 PLYSETGGIMPLMAKAAQEAGAVGIRA---NSVRDIKEIQAIT-----DLPIIGIIKKDYPPQEPFITA--TMTEVDQLA 98 (234)
T ss_dssp TTCCTTCCSHHHHHHHHHHHTCSEEEE---ESHHHHHHHHTTC-----CSCEEEECBCCCTTSCCCBSC--SHHHHHHHH
T ss_pred CCcCCccchHHHHHHHHHHCCCcEeec---CCHHHHHHHHHhC-----CCCEEeeEcCCCCccccccCC--hHHHHHHHH
Confidence 444555 5444 45566899999876 4788888887653 3455422 211 234566666
Q ss_pred Hh-cCEEEEcCCCccCCCCC-CcHHHHHHHHHHHHHHc--CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceE
Q 008112 338 TA-SDGAMVARGDLGAELPI-EEVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAV 412 (577)
Q Consensus 338 ~~-sDGImIaRGDLg~elg~-e~v~~~qk~Ii~~c~~a--GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~i 412 (577)
+. +|.|.++-.-+.- |. +.+ .++++.+++. +++++.-.. |..| +..+...|+|.+
T Consensus 99 ~~Gad~V~l~~~~~~~--~~~~~~----~~~i~~i~~~~~~~~v~~~~~-----------t~~e---a~~a~~~Gad~i 157 (234)
T 1yxy_A 99 ALNIAVIAMDCTKRDR--HDGLDI----ASFIRQVKEKYPNQLLMADIS-----------TFDE---GLVAHQAGIDFV 157 (234)
T ss_dssp TTTCSEEEEECCSSCC--TTCCCH----HHHHHHHHHHCTTCEEEEECS-----------SHHH---HHHHHHTTCSEE
T ss_pred HcCCCEEEEcccccCC--CCCccH----HHHHHHHHHhCCCCeEEEeCC-----------CHHH---HHHHHHcCCCEE
Confidence 55 8988776322110 10 122 4667777776 788775322 3333 567888999999
No 355
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=33.78 E-value=73 Score=30.76 Aligned_cols=102 Identities=15% Similarity=0.168 Sum_probs=65.0
Q ss_pred CEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh--cCEEEEcCCCccCCCCCCcHHHHHHHHHH
Q 008112 291 DFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGAMVARGDLGAELPIEEVPLLQEEIIR 368 (577)
Q Consensus 291 D~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~--sDGImIaRGDLg~elg~e~v~~~qk~Ii~ 368 (577)
..+..|| +.+.+..+++. ..++.+..-.+... .+..+.+.. .+++-.. ...+-+..++
T Consensus 145 ~vii~SF--~~~~l~~~~~~----~p~~~~~~l~~~~~--~~~~~~~~~~~~~~i~~~------------~~~~~~~~v~ 204 (252)
T 3qvq_A 145 PLLFSSF--NYFALVSAKAL----WPEIARGYNVSAIP--SAWQERLEHLDCAGLHIH------------QSFFDVQQVS 204 (252)
T ss_dssp CEEEEES--CHHHHHHHHHH----CTTSCEEEECSSCC--TTHHHHHHHHTCSEEEEE------------GGGCCHHHHH
T ss_pred CEEEEeC--CHHHHHHHHHH----CCCCcEEEEEecCc--hhHHHHHHHcCCeEEecc------------hhhCCHHHHH
Confidence 3678888 77777777764 34555555554321 123333433 4444432 1123367899
Q ss_pred HHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHH
Q 008112 369 TCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 432 (577)
Q Consensus 369 ~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~ 432 (577)
.|+++|++|.+=|- -+-.++..++..|+|+|+- +||..+.+.+.
T Consensus 205 ~~~~~G~~v~~WTv-------------n~~~~~~~l~~~GVdgIiT-------D~P~~~~~~l~ 248 (252)
T 3qvq_A 205 DIKAAGYKVLAFTI-------------NDESLALKLYNQGLDAVFS-------DYPQKIQSAID 248 (252)
T ss_dssp HHHHTTCEEEEECC-------------CCHHHHHHHHHTTCCEEEE-------SSHHHHHHHHH
T ss_pred HHHHCCCEEEEEcC-------------CCHHHHHHHHHcCCCEEEe-------CCHHHHHHHHH
Confidence 99999999998762 1234567888899999986 68988877764
No 356
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=33.42 E-value=2e+02 Score=30.47 Aligned_cols=124 Identities=12% Similarity=0.054 Sum_probs=72.8
Q ss_pred HHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhcccc
Q 008112 364 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATIT 443 (577)
Q Consensus 364 k~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~ 443 (577)
.-+...|+..|.++++-. |..+....+...-..|++.+....+. .| -++++...+++.+-+..++
T Consensus 188 ~AlA~aAa~~Gl~~~Ivm-----------P~~~s~~k~~~~r~~GAeVv~v~~~~---~~-~~a~~~a~el~~~~~~~~~ 252 (430)
T 4aec_A 188 IGLAFIAASRGYRLILTM-----------PASMSMERRVLLKAFGAELVLTDPAK---GM-TGAVQKAEEILKNTPDAYM 252 (430)
T ss_dssp HHHHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHSTTEEE
T ss_pred HHHHHHHHHhCCEEEEEE-----------cCCCCHHHHHHHHHCCCEEEEECCCC---Ch-HHHHHHHHHHHHhcCCcEE
Confidence 345667999999987642 23233344556677899988775321 12 3566666665554322222
Q ss_pred CCCCCCCCCcccCCChhHHHHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHh----hCCCCeEEEEcCcHH
Q 008112 444 GGAMPPNLGQAFKNHMSEMFAYHATMMSNTLG--T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTNEKR 508 (577)
Q Consensus 444 ~~~~~~~l~~~~~~~~~~~ia~~a~~~a~~~~--a-aIiV~T~sG~tA~~is~----~RP~~PIIAvT~~~~ 508 (577)
..+ |.+ +. .+.......+.++.++++ . .||+..-+|.+.--+++ ..|.+.||++.+...
T Consensus 253 i~~-~~n---p~--~~~aG~~T~a~EI~eQl~~~~D~vVvpvG~GGtlaGi~~~lk~~~p~~kVigVep~~s 318 (430)
T 4aec_A 253 LQQ-FDN---PA--NPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTES 318 (430)
T ss_dssp CCT-TTC---TH--HHHHHHHTHHHHHHHHTTSCEEEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGG
T ss_pred ecC-CCC---cc--HHHHHHHHHHHHHHHHcCCCCCEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEEeCCC
Confidence 211 111 00 011222334567777764 3 78889999988766655 489999999977543
No 357
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=33.34 E-value=75 Score=31.30 Aligned_cols=52 Identities=13% Similarity=0.109 Sum_probs=31.9
Q ss_pred CHHHHHHHHH-hCCcEEEEeccCC------ChHHHHHHHHHHHHHHHhcCCCeeEEEeecCC
Q 008112 122 TREMIWKLAE-AGMNVARLNMSHG------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (577)
Q Consensus 122 ~~e~l~~li~-~Gm~v~RiN~sHg------~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~G 176 (577)
+.+.++.|.+ .|+|++|+-+... +++.+.+.++.+=+...+.| +.+++|+.+
T Consensus 44 ~~~d~~~l~~~~G~N~vRi~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~G---l~vild~h~ 102 (306)
T 2cks_A 44 TDSSLDALAYDWKADIIRLSMYIQEDGYETNPRGFTDRMHQLIDMATARG---LYVIVDWHI 102 (306)
T ss_dssp SHHHHHHHHHTSCCSEEEEEEESSTTSGGGCHHHHHHHHHHHHHHHHTTT---CEEEEEEEC
T ss_pred CHHHHHHHHHHcCCCEEEEEeeecCCCcccCHHHHHHHHHHHHHHHHHCC---CEEEEEecC
Confidence 5688998986 7999999987642 22223233333333334444 778888754
No 358
>2dpr_A CON-T(K7GLA); conantoxin, nmdar antagonist, GLA-containing, metal B protein; HET: CGU; 1.70A {Synthetic} PDB: 1ont_A*
Probab=33.24 E-value=30 Score=21.97 Aligned_cols=17 Identities=12% Similarity=0.292 Sum_probs=13.8
Q ss_pred hHHHHHHHHHHHHHHHh
Q 008112 146 HASHQKVIDLVKEYNAQ 162 (577)
Q Consensus 146 ~e~~~~~i~~ir~~~~~ 162 (577)
.++.+++++|+|+++-.
T Consensus 2 eeeyqemlenlreaevk 18 (26)
T 2dpr_A 2 EEEYQEMLENLREAEVK 18 (26)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHH
Confidence 36789999999998643
No 359
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=33.18 E-value=1.3e+02 Score=30.22 Aligned_cols=67 Identities=13% Similarity=0.219 Sum_probs=48.8
Q ss_pred HHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHH-----------hcCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHH
Q 008112 304 VHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT-----------ASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRS 372 (577)
Q Consensus 304 v~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~-----------~sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~ 372 (577)
++.+++.+.+.|.++.|.+--+.....+|+++++. -.|.|+-+- +=+..+..+-+.|.+
T Consensus 91 a~aa~~~L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~----------Dn~~~R~~in~~c~~ 160 (292)
T 3h8v_A 91 VQAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV----------DNFEARMTINTACNE 160 (292)
T ss_dssp HHHHHHHHHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC----------SSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECC----------cchhhhhHHHHHHHH
Confidence 45666777888999998887777766678887763 467776541 223466778899999
Q ss_pred cCCceEEE
Q 008112 373 MGKAVIVA 380 (577)
Q Consensus 373 aGKPvi~A 380 (577)
+++|.+.+
T Consensus 161 ~~~Pli~~ 168 (292)
T 3h8v_A 161 LGQTWMES 168 (292)
T ss_dssp HTCCEEEE
T ss_pred hCCCEEEe
Confidence 99998754
No 360
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=33.02 E-value=84 Score=31.05 Aligned_cols=52 Identities=12% Similarity=0.215 Sum_probs=32.8
Q ss_pred CCHHHHHHHHHhCCcEEEEecc---------CCC--hHHHHHHHHHHHHHHHhcCCCeeEEEeecCC
Q 008112 121 NTREMIWKLAEAGMNVARLNMS---------HGD--HASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (577)
Q Consensus 121 ~~~e~l~~li~~Gm~v~RiN~s---------Hg~--~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~G 176 (577)
.+.+.|+.|.+.|+|++||-++ ++. .+.+..+-+.|.. ..+.| +.+++|+.+
T Consensus 42 ~~~~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~-a~~~G---i~vildlh~ 104 (320)
T 3nco_A 42 IEDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDV-ALKND---LVVIINCHH 104 (320)
T ss_dssp CCHHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHH-HHHTT---CEEEEECCC
T ss_pred CCHHHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHH-HHHCC---CEEEEEcCC
Confidence 3588999999999999999764 222 1222222222332 33444 778899876
No 361
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=32.99 E-value=2.7e+02 Score=27.48 Aligned_cols=131 Identities=18% Similarity=0.223 Sum_probs=70.8
Q ss_pred HHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhc---CC-CceEEE--eecChh--hH--------------hhHHHHHHh-
Q 008112 283 KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSC---GA-DIHVIV--KIESAD--SI--------------PNLHSIITA- 339 (577)
Q Consensus 283 ~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~---~~-~i~Iia--KIEt~~--gv--------------~NldeIl~~- 339 (577)
+.+.+.|+|++.+.=.--.+-++.+++.+.+. |. ...+++ .+-+.. .+ .++-.....
T Consensus 77 ~~~~~~gad~vTVh~~~G~~~~~aa~~~~~~~~~~g~~~~~li~Vt~lTS~~~~~l~~~~g~~~~~~e~v~~~A~~a~~~ 156 (259)
T 3tfx_A 77 KALAKLGITFTTVHALGGSQMIKSAKDGLIAGTPAGHSVPKLLAVTELTSISDDVLRNEQNCRLPMAEQVLSLAKMAKHS 156 (259)
T ss_dssp HHHHTTTCSEEEEEGGGCHHHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSCBSSCHHHHHHHHHHHHHHT
T ss_pred HHHHhcCCCEEEEcCCCCHHHHHHHHHHHHHhcccCCCCceEEEEEEeCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHh
Confidence 34567899999886655666777777777542 22 334444 443331 11 122222222
Q ss_pred -cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHH------HHHHHHhccceE
Q 008112 340 -SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSD------IAIAVREGADAV 412 (577)
Q Consensus 340 -sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~D------v~nav~~G~D~i 412 (577)
.||++.. .+++..+.+. .|.-.++-|+-. +|.-+...| ...++..|+|.+
T Consensus 157 G~dGvV~s---------~~e~~~ir~~-------~~~~f~~vtPGI-------r~~g~~~gDQ~Rv~T~~~a~~aGad~i 213 (259)
T 3tfx_A 157 GADGVICS---------PLEVKKLHEN-------IGDDFLYVTPGI-------RPAGNAKDDQSRVATPKMAKEWGSSAI 213 (259)
T ss_dssp TCCEEECC---------GGGHHHHHHH-------HCSSSEEEECCC-------CCC-----------CHHHHHHTTCSEE
T ss_pred CCCEEEEC---------HHHHHHHHhh-------cCCccEEEcCCc-------CCCCCCcCCccccCCHHHHHHcCCCEE
Confidence 5777643 3444444321 233323223322 555555555 667899999999
Q ss_pred EeccccCCCCCHHHHHHHHHHHHH
Q 008112 413 MLSGETAHGKFPLKAVKVMHTVSL 436 (577)
Q Consensus 413 mLs~ETa~G~yP~eaV~~m~~I~~ 436 (577)
....-.....-|.++++.+.+...
T Consensus 214 VvGr~I~~a~dp~~a~~~i~~~~~ 237 (259)
T 3tfx_A 214 VVGRPITLASDPKAAYEAIKKEFN 237 (259)
T ss_dssp EECHHHHTSSSHHHHHHHHHHHHT
T ss_pred EEChHHhCCCCHHHHHHHHHHHHH
Confidence 986555556689998887776543
No 362
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=32.90 E-value=2.8e+02 Score=27.49 Aligned_cols=146 Identities=15% Similarity=0.169 Sum_probs=73.6
Q ss_pred cCEEEEcC--CCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHH-HHHHhccceEEecc
Q 008112 340 SDGAMVAR--GDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIA-IAVREGADAVMLSG 416 (577)
Q Consensus 340 sDGImIaR--GDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~-nav~~G~D~imLs~ 416 (577)
+||+++.- |+ +..+..++-..+-+..++.++ -..|||.-|. ..+-+|..+.+ .|-..|+|++|+..
T Consensus 42 v~gl~~~GttGE-~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg---------~~~t~~ai~la~~a~~~Gadavlv~~ 110 (297)
T 3flu_A 42 TDGIVAVGTTGE-SATLSVEEHTAVIEAVVKHVA-KRVPVIAGTG---------ANNTVEAIALSQAAEKAGADYTLSVV 110 (297)
T ss_dssp CCEEEESSTTTT-GGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC---------CSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEeCccccC-cccCCHHHHHHHHHHHHHHhC-CCCcEEEeCC---------CcCHHHHHHHHHHHHHcCCCEEEECC
Confidence 89999841 11 122333333333333333332 2468887543 33445555544 47778999999864
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHhccccCCCCCCCCCcccCCChhHHHHHHHHHHHhhcCceEEE-EcCCh---HHHHHHH
Q 008112 417 ETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSIVV-FTRTG---FMAILLS 492 (577)
Q Consensus 417 ETa~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~l~~~~~~~~~~~ia~~a~~~a~~~~aaIiV-~T~sG---~tA~~is 492 (577)
=--...-+.+.++....|+..+.--+. +|+.-......-..+.+ .+++ +...-+-+ .| +| +..+.+.
T Consensus 111 P~y~~~~~~~l~~~f~~va~a~~lPii---lYn~P~~tg~~l~~~~~----~~La-~~pnivgiKds-sgd~~~~~~~~~ 181 (297)
T 3flu_A 111 PYYNKPSQEGIYQHFKTIAEATSIPMI---IYNVPGRTVVSMTNDTI----LRLA-EIPNIVGVKEA-SGNIGSNIELIN 181 (297)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCCSCEE---EEECHHHHSSCCCHHHH----HHHT-TSTTEEEEEEC-SCCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCEE---EEECCchhccCCCHHHH----HHHH-cCCCEEEEEeC-CCCHHHHHHHHH
Confidence 332223356778888888887753211 11100000011113333 3455 33321122 44 33 4566677
Q ss_pred hhCCCCeEEEEcC
Q 008112 493 HYRPSGTIFAFTN 505 (577)
Q Consensus 493 ~~RP~~PIIAvT~ 505 (577)
..+|+..|+.-..
T Consensus 182 ~~~~~f~v~~G~d 194 (297)
T 3flu_A 182 RAPEGFVVLSGDD 194 (297)
T ss_dssp HSCTTCEEEECCG
T ss_pred hcCCCeEEEECcH
Confidence 7778888877644
No 363
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=32.86 E-value=86 Score=32.13 Aligned_cols=60 Identities=22% Similarity=0.131 Sum_probs=40.7
Q ss_pred CceEEEeecChhh-HhhHHHHHHh--cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHh
Q 008112 317 DIHVIVKIESADS-IPNLHSIITA--SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLES 386 (577)
Q Consensus 317 ~i~IiaKIEt~~g-v~NldeIl~~--sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeS 386 (577)
.++|++ =|+... .+.+.++++. +|+|++..+-.| .+ .--.+++..|+++|.++.+- ++|+
T Consensus 251 ~iPIa~-dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~G------Gi-t~~~~i~~~A~~~g~~~~~~--~~~~ 313 (382)
T 1rvk_A 251 DIPVVG-PESAAGKHWHRAEWIKAGACDILRTGVNDVG------GI-TPALKTMHLAEAFGMECEVH--GNTA 313 (382)
T ss_dssp SSCEEE-CSSCSSHHHHHHHHHHTTCCSEEEECHHHHT------SH-HHHHHHHHHHHHTTCCEEEC--CCSH
T ss_pred CCCEEE-eCCccCcHHHHHHHHHcCCCCEEeeCchhcC------CH-HHHHHHHHHHHHcCCeEeec--CCCC
Confidence 456544 677777 7788888775 899998532221 12 22357899999999998874 5554
No 364
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=32.75 E-value=57 Score=33.00 Aligned_cols=66 Identities=8% Similarity=0.207 Sum_probs=43.7
Q ss_pred HHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEE----eecChhhHhhHHHHHHh-cCEEEEcCCCccCC
Q 008112 281 DIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIV----KIESADSIPNLHSIITA-SDGAMVARGDLGAE 353 (577)
Q Consensus 281 dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~Iia----KIEt~~gv~NldeIl~~-sDGImIaRGDLg~e 353 (577)
..+.+.+.|+|||-.+|. .+.++++++. ..++|++ +....+.++++.+.++. ++|+.+||.=+-.+
T Consensus 194 aariA~elGAD~VKt~~t--~e~~~~vv~~-----~~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~ 264 (295)
T 3glc_A 194 ATRIAAEMGAQIIKTYYV--EKGFERIVAG-----CPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSD 264 (295)
T ss_dssp HHHHHHHTTCSEEEEECC--TTTHHHHHHT-----CSSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTSS
T ss_pred HHHHHHHhCCCEEEeCCC--HHHHHHHHHh-----CCCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCc
Confidence 556788999999999986 3455554432 2355554 22345667777777766 88999988655443
No 365
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=32.72 E-value=1.5e+02 Score=28.56 Aligned_cols=66 Identities=15% Similarity=0.205 Sum_probs=47.3
Q ss_pred HHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 304 VHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 304 v~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
++.+++.+.+.|.++.+.+--+... -+|++++++-.|.|+-+-.+ +..+..+-+.|++.++|.+.+
T Consensus 84 a~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~----------~~~r~~l~~~~~~~~~p~i~~ 149 (251)
T 1zud_1 84 SQVSQQRLTQLNPDIQLTALQQRLT-GEALKDAVARADVVLDCTDN----------MATRQEINAACVALNTPLITA 149 (251)
T ss_dssp HHHHHHHHHHHCTTSEEEEECSCCC-HHHHHHHHHHCSEEEECCSS----------HHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEeccCC-HHHHHHHHhcCCEEEECCCC----------HHHHHHHHHHHHHhCCCEEEE
Confidence 5556667777788877766544332 26888999889998876222 235677889999999998875
No 366
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=32.70 E-value=3.4e+02 Score=26.94 Aligned_cols=89 Identities=10% Similarity=0.149 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEe
Q 008112 302 QVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVAT 381 (577)
Q Consensus 302 ~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~AT 381 (577)
+.++.++++..+. .+.+++-+=.+..++-+.+ .+|.+-||-+++ ...+ +++.+.+.||||++.|
T Consensus 73 ~gl~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~---~~d~~kIga~~~------~n~~-----ll~~~a~~~kPV~lk~ 136 (280)
T 2qkf_A 73 EGLKIFEKVKAEF--GIPVITDVHEPHQCQPVAE---VCDVIQLPAFLA------RQTD-----LVVAMAKTGNVVNIKK 136 (280)
T ss_dssp HHHHHHHHHHHHH--CCCEEEECCSGGGHHHHHH---HCSEEEECGGGT------TBHH-----HHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHHHHHc--CCcEEEecCCHHHHHHHHh---hCCEEEECcccc------cCHH-----HHHHHHcCCCcEEEEC
Confidence 3366666666554 4678887777777666655 479999985544 2333 5555567899999977
Q ss_pred hhhHhhhcCCCCChHhHHHHHHHHH-hccceEEe
Q 008112 382 NMLESMIVHPTPTRAEVSDIAIAVR-EGADAVML 414 (577)
Q Consensus 382 q~LeSM~~~~~PtrAEv~Dv~nav~-~G~D~imL 414 (577)
.|. -|-.|+...+..+. .|.+-++|
T Consensus 137 G~~--------~t~~e~~~A~~~i~~~Gn~~i~L 162 (280)
T 2qkf_A 137 PQF--------LSPSQMKNIVEKFHEAGNGKLIL 162 (280)
T ss_dssp CTT--------SCGGGHHHHHHHHHHTTCCCEEE
T ss_pred CCC--------CCHHHHHHHHHHHHHcCCCeEEE
Confidence 653 25567777777655 57644444
No 367
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=32.66 E-value=63 Score=32.23 Aligned_cols=63 Identities=10% Similarity=0.131 Sum_probs=41.1
Q ss_pred cCHHHHHHHHhcCCCEEEEc------CCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh----cCEEEEc
Q 008112 277 KDWDDIKFGVDNKVDFYAVS------FVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA----SDGAMVA 346 (577)
Q Consensus 277 kD~~dI~~al~~gvD~I~~S------fV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~----sDGImIa 346 (577)
+|.++++.+++.|++.|.+. |--+.+...++.. ....+..+|+ | .|+.+.+++... +||++||
T Consensus 161 h~~~El~rAl~~~a~iIGINNRnL~tf~vdl~~t~~L~~---~ip~~~~~Vs--E--SGI~t~~dv~~l~~~G~~a~LVG 233 (258)
T 4a29_A 161 NDENDLDIALRIGARFIGIMSRDFETGEINKENQRKLIS---MIPSNVVKVA--K--LGISERNEIEELRKLGVNAFLIS 233 (258)
T ss_dssp SSHHHHHHHHHTTCSEEEECSBCTTTCCBCHHHHHHHHT---TSCTTSEEEE--E--ESSCCHHHHHHHHHTTCCEEEEC
T ss_pred chHHHHHHHhcCCCcEEEEeCCCccccccCHHHHHHHHh---hCCCCCEEEE--c--CCCCCHHHHHHHHHCCCCEEEEC
Confidence 67888999999999999874 4444444444433 3344566665 2 266666655543 7999998
No 368
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=32.58 E-value=82 Score=32.09 Aligned_cols=45 Identities=13% Similarity=0.254 Sum_probs=34.1
Q ss_pred HHHHHHhCCcEEEEeccCCChHHHHHHHHHHHHHHHhcCCCeeEEEeec
Q 008112 126 IWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDT 174 (577)
Q Consensus 126 l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl 174 (577)
.+++.+.|.+.+.+++.|++.+.-.+.++.+|++ .+ ..+.|++|.
T Consensus 148 a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a---~g-~~~~l~vDa 192 (366)
T 1tkk_A 148 AENYLKQGFQTLKIKVGKDDIATDIARIQEIRKR---VG-SAVKLRLDA 192 (366)
T ss_dssp HHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHH---HC-SSSEEEEEC
T ss_pred HHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHH---hC-CCCeEEEEC
Confidence 4567889999999999998887777888888765 34 345566664
No 369
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=32.46 E-value=66 Score=32.63 Aligned_cols=61 Identities=18% Similarity=0.230 Sum_probs=49.5
Q ss_pred cCHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHH
Q 008112 277 KDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSII 337 (577)
Q Consensus 277 kD~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl 337 (577)
.|.+.++.-++.|+||++--++=+++....+++.+...|-+++|++-|==.....++.-+.
T Consensus 164 ~d~~~Lk~KvdAGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~~ 224 (304)
T 3fst_A 164 ADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKLA 224 (304)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEECCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccCCHHHHHHHHHHHHhcCCCCcEEEEecccCCHHHHHHHH
Confidence 5677788889999999999999999999999999998888888888764444455555553
No 370
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=32.43 E-value=33 Score=29.55 Aligned_cols=63 Identities=10% Similarity=0.101 Sum_probs=46.7
Q ss_pred HHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 303 VVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 303 dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
=+..++++..+.|-++.+.+ .+...+++.+.-.|.|++| +.+....+++-+.|...|+||.+-
T Consensus 22 lv~km~~~a~~~gi~v~i~a-----~~~~~~~~~~~~~DvvLLg----------PQV~y~~~~ik~~~~~~~ipV~vI 84 (108)
T 3nbm_A 22 LANAINEGANLTEVRVIANS-----GAYGAHYDIMGVYDLIILA----------PQVRSYYREMKVDAERLGIQIVAT 84 (108)
T ss_dssp HHHHHHHHHHHHTCSEEEEE-----EETTSCTTTGGGCSEEEEC----------GGGGGGHHHHHHHHTTTTCEEEEC
T ss_pred HHHHHHHHHHHCCCceEEEE-----cchHHHHhhccCCCEEEEC----------hHHHHHHHHHHHHhhhcCCcEEEe
Confidence 46677777777787777776 2333566677779999997 356667788888888999999873
No 371
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=32.25 E-value=1.7e+02 Score=29.12 Aligned_cols=124 Identities=9% Similarity=-0.042 Sum_probs=68.8
Q ss_pred HHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhcccc
Q 008112 364 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATIT 443 (577)
Q Consensus 364 k~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~ 443 (577)
.-+...|+..|.++.+-.. .+..| ...+...-..|++.+...++... .++.++.+...+++++-...+.
T Consensus 85 ~alA~~a~~~G~~~~iv~p------~~~~~----~~k~~~~~~~GA~v~~~~~~~~~-~~~~~~~~~a~~l~~~~~~~~~ 153 (325)
T 1j0a_A 85 FVTGLAAKKLGLDAILVLR------GKEEL----KGNYLLDKIMGIETRVYDAKDSF-ELMKYAEEIAEELKREGRKPYV 153 (325)
T ss_dssp HHHHHHHHHTTCEEEEEEE------SCCCS----CHHHHHHHHTTCEEEEESCCSTT-THHHHHHHHHHHHTTSSCCEEE
T ss_pred HHHHHHHHHhCCcEEEEEC------CCCCC----CchHHHHHHCCCEEEEeCcchhh-hhhHHHHHHHHHHHHcCCceEE
Confidence 4466789999999876421 11101 12244556789998877543211 1123455554444322111111
Q ss_pred CCCCCCCCCcccCCChh--HHHHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHh----hCCCCeEEEEcCc
Q 008112 444 GGAMPPNLGQAFKNHMS--EMFAYHATMMSNTLG--T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTNE 506 (577)
Q Consensus 444 ~~~~~~~l~~~~~~~~~--~~ia~~a~~~a~~~~--a-aIiV~T~sG~tA~~is~----~RP~~PIIAvT~~ 506 (577)
+.. + .. ++. +....-+.++.++++ . .||+..-+|.|+--+++ +.|...|+++-+.
T Consensus 154 ~p~---~----~~-n~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigVe~~ 217 (325)
T 1j0a_A 154 IPP---G----GA-SPIGTLGYVRAVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVG 217 (325)
T ss_dssp ECG---G----GC-SHHHHTHHHHHHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEEECS
T ss_pred EcC---C----CC-CHHHHHHHHHHHHHHHHhhCCCCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEEEec
Confidence 110 0 01 121 222234567777774 4 89999999998766654 5799999999885
No 372
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=32.21 E-value=59 Score=31.68 Aligned_cols=58 Identities=16% Similarity=0.266 Sum_probs=40.3
Q ss_pred HHHHhcCCCEEEEcCCCCHHH--------HHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh----cCEEEEc
Q 008112 283 KFGVDNKVDFYAVSFVKDAQV--------VHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA----SDGAMVA 346 (577)
Q Consensus 283 ~~al~~gvD~I~~SfV~sa~d--------v~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~----sDGImIa 346 (577)
..|.+.|+++|. |||..-+| ++++.++++..+.++.|++ .+++|..+|.++ +|.+-+.
T Consensus 119 ~~Aa~AGa~yIS-PfvgRi~d~g~dG~~~v~~i~~~~~~~~~~T~Ila-----AS~Rn~~~v~~aa~~G~d~~Tip 188 (223)
T 3s1x_A 119 LLAAKAGVTYVS-PFVGRLDDIGEDGMQIIDMIRTIFNNYIIKTQILV-----ASIRNPIHVLRSAVIGADVVTVP 188 (223)
T ss_dssp HHHHHTTCSEEE-EBSHHHHHTTSCTHHHHHHHHHHHHHTTCCSEEEE-----BSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHcCCeEEE-eecchHhhcCCCHHHHHHHHHHHHHHcCCCCEEEE-----EeCCCHHHHHHHHHcCCCEEEeC
Confidence 446789999875 99987665 5666667777677777776 467777777652 6666554
No 373
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=32.04 E-value=1.6e+02 Score=27.20 Aligned_cols=109 Identities=14% Similarity=0.188 Sum_probs=64.1
Q ss_pred HHHHHHHHhcCCCEEE-----EcCCCC----HHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCC
Q 008112 279 WDDIKFGVDNKVDFYA-----VSFVKD----AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARG 348 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~-----~SfV~s----a~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRG 348 (577)
.+.++.+.+.|+|++- -+|+++ .+.++++++.+ +..+.+-.++.+++- .++...+. +|++.+.-+
T Consensus 19 ~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~---~~~~~v~l~v~d~~~--~i~~~~~~gad~v~vh~~ 93 (220)
T 2fli_A 19 ASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHS---KLVFDCHLMVVDPER--YVEAFAQAGADIMTIHTE 93 (220)
T ss_dssp HHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTC---CSEEEEEEESSSGGG--GHHHHHHHTCSEEEEEGG
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhC---CCCEEEEEeecCHHH--HHHHHHHcCCCEEEEccC
Confidence 3556777888999842 255666 67777766543 334556677777632 45555555 899988521
Q ss_pred CccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEe
Q 008112 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML 414 (577)
Q Consensus 349 DLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imL 414 (577)
. + +.. ...++.++++|+.++++.. | .|..| ...++..++|.+++
T Consensus 94 ~-----~-~~~----~~~~~~~~~~g~~i~~~~~--------~-~t~~e---~~~~~~~~~d~vl~ 137 (220)
T 2fli_A 94 S-----T-RHI----HGALQKIKAAGMKAGVVIN--------P-GTPAT---ALEPLLDLVDQVLI 137 (220)
T ss_dssp G-----C-SCH----HHHHHHHHHTTSEEEEEEC--------T-TSCGG---GGGGGTTTCSEEEE
T ss_pred c-----c-ccH----HHHHHHHHHcCCcEEEEEc--------C-CCCHH---HHHHHHhhCCEEEE
Confidence 1 1 222 2455666778988888741 1 12222 12334577898865
No 374
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=32.00 E-value=99 Score=31.24 Aligned_cols=140 Identities=17% Similarity=0.116 Sum_probs=74.4
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHH----hcCEEEEc-CCCccC-
Q 008112 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT----ASDGAMVA-RGDLGA- 352 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~----~sDGImIa-RGDLg~- 352 (577)
.+..+...+.|+|.|..|.+.+..++ .+.+.+.+....+++-+ .+++|... -+|.|-+. |+.-|.
T Consensus 90 ide~qil~aaGAD~Id~s~~~~~~~l---i~~i~~~~~g~~vvv~v------~~~~Ea~~a~~~Gad~I~v~g~~gTG~~ 160 (297)
T 4adt_A 90 FVEAQILEELKVDMLDESEVLTMADE---YNHINKHKFKTPFVCGC------TNLGEALRRISEGASMIRTKGEAGTGNI 160 (297)
T ss_dssp HHHHHHHHHTTCSEEEEETTSCCSCS---SCCCCGGGCSSCEEEEE------SSHHHHHHHHHHTCSEEEECCCTTSCCC
T ss_pred HHHHHHHHHcCCCEEEcCCCCCHHHH---HHHHHhcCCCCeEEEEe------CCHHHHHHHHhCCCCEEEECCCcCCCch
Confidence 55666667899999977766444332 12222222345666633 44444433 27877775 211110
Q ss_pred ------------------CCCCCcHHHH-------HHHHHHHHHHcCCceEE-EehhhHhhhcCCCCChHhHHHHHHHHH
Q 008112 353 ------------------ELPIEEVPLL-------QEEIIRTCRSMGKAVIV-ATNMLESMIVHPTPTRAEVSDIAIAVR 406 (577)
Q Consensus 353 ------------------elg~e~v~~~-------qk~Ii~~c~~aGKPvi~-ATq~LeSM~~~~~PtrAEv~Dv~nav~ 406 (577)
.++.+.+... .+.+-+.+.....|+++ |. ...-|. .|+..+..
T Consensus 161 ~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~~iPVivvA~--------GGI~t~---~dv~~~~~ 229 (297)
T 4adt_A 161 IEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLTRKLKRLPVVNFAA--------GGIATP---ADAAMCMQ 229 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHTSCSSEEEEE--------SCCCSH---HHHHHHHH
T ss_pred HHHHHHHHHhhhhhhhhccccccccccccccCCCCHHHHHHHHHhcCCCeEEEec--------CCCCCH---HHHHHHHH
Confidence 1111121111 01122223445788873 32 223344 46777888
Q ss_pred hccceEEeccccCCCCCHHHHHHHHHHHHHHH
Q 008112 407 EGADAVMLSGETAHGKFPLKAVKVMHTVSLRT 438 (577)
Q Consensus 407 ~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~a 438 (577)
.|+|++++..--.....|.++++.+.......
T Consensus 230 ~GAdgVlVGsai~~a~dp~~~~~~l~~ai~~~ 261 (297)
T 4adt_A 230 LGMDGVFVGSGIFESENPQKMASSIVMAVSNF 261 (297)
T ss_dssp TTCSCEEESHHHHTSSCHHHHHHHHHHHHHTT
T ss_pred cCCCEEEEhHHHHcCCCHHHHHHHHHHHHHhh
Confidence 89999998643334467999988887766543
No 375
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=31.99 E-value=1.9e+02 Score=28.17 Aligned_cols=148 Identities=12% Similarity=0.026 Sum_probs=79.9
Q ss_pred cCH-HHHHHHHhcCCCEEEEcC----CC------CHHHHHHHHHHHHhcCCCceEEEe-e----------c---------
Q 008112 277 KDW-DDIKFGVDNKVDFYAVSF----VK------DAQVVHELKNYLKSCGADIHVIVK-I----------E--------- 325 (577)
Q Consensus 277 kD~-~dI~~al~~gvD~I~~Sf----V~------sa~dv~~lr~~l~~~~~~i~IiaK-I----------E--------- 325 (577)
.+. +.++.+.+.|+|+|=+.. +. +.+++.++++.+++.|-.+..+.- . .
T Consensus 15 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~g~~~~~p~~~~~~~~~~~~ 94 (340)
T 2zds_A 15 LPLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAVCDAIIDERHEAILPA 94 (340)
T ss_dssp SCHHHHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEEEEEEHHHHHHHHCSCCSHHHHHHSCH
T ss_pred CCHHHHHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEEEeeccccccccccccccccccccccc
Confidence 343 447888899999998864 22 335688999999887655433221 1 0
Q ss_pred ------C-----hhhHhhHHHHHHh-----cCEEEEcCCCccCC--CC------------CCcHHHHHHHHHHHHHHcCC
Q 008112 326 ------S-----ADSIPNLHSIITA-----SDGAMVARGDLGAE--LP------------IEEVPLLQEEIIRTCRSMGK 375 (577)
Q Consensus 326 ------t-----~~gv~NldeIl~~-----sDGImIaRGDLg~e--lg------------~e~v~~~qk~Ii~~c~~aGK 375 (577)
+ .++++.+...++. ++.|.+-.|..... .+ ++.+....+++...|.++|.
T Consensus 95 ~l~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv 174 (340)
T 2zds_A 95 RIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGV 174 (340)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHcCC
Confidence 1 1234455544443 66777765543210 11 11233344567777888888
Q ss_pred ceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccC----CCCCHHHHHHH
Q 008112 376 AVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETA----HGKFPLKAVKV 430 (577)
Q Consensus 376 Pvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa----~G~yP~eaV~~ 430 (577)
.+.+ |.+-.....+..++.++...+. +.+.+-+.-+|. .|..|.++++.
T Consensus 175 ~l~l-----En~~~~~~~~~~~~~~ll~~v~-~~~~vg~~~D~~H~~~~g~d~~~~l~~ 227 (340)
T 2zds_A 175 RFAH-----EVHPSEIAYDYWTTHRALEAVG-HRPAFGLNFDPSHFVWQDLDPVGFLWD 227 (340)
T ss_dssp EEEE-----ECCTTSSCCSHHHHHHHHHHTT-TCTTEEEEECCHHHHHTTCCHHHHHHH
T ss_pred EEEE-----EcCCCcccCCHHHHHHHHHhcC-CCCCeeEEEchhhHHHhCCCHHHHHHH
Confidence 6654 3333333456666655555542 123344444443 35556655543
No 376
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=31.93 E-value=62 Score=35.19 Aligned_cols=66 Identities=17% Similarity=0.162 Sum_probs=43.2
Q ss_pred HHHHHHHHhcCCCEEEEcCCC---------CHHHHHHHHHHHHhc--CCCceEEEeecChhhHhhHHHHHHh----cCEE
Q 008112 279 WDDIKFGVDNKVDFYAVSFVK---------DAQVVHELKNYLKSC--GADIHVIVKIESADSIPNLHSIITA----SDGA 343 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~---------sa~dv~~lr~~l~~~--~~~i~IiaKIEt~~gv~NldeIl~~----sDGI 343 (577)
.++.+.+.+.|+|+|.+|.-- +.+-+.++++.+... +.++.||+- -||.+-.+++++ +|++
T Consensus 354 ~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~----GGI~~g~Dv~kaLalGAdaV 429 (511)
T 1kbi_A 354 TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVD----GGVRRGTDVLKALCLGAKGV 429 (511)
T ss_dssp HHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEE----SSCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEE----CCCCCHHHHHHHHHcCCCEE
Confidence 577888999999999996421 123455555555432 346888883 345554555443 9999
Q ss_pred EEcCC
Q 008112 344 MVARG 348 (577)
Q Consensus 344 mIaRG 348 (577)
||||.
T Consensus 430 ~iGr~ 434 (511)
T 1kbi_A 430 GLGRP 434 (511)
T ss_dssp EECHH
T ss_pred EECHH
Confidence 99983
No 377
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=31.86 E-value=3.4e+02 Score=26.99 Aligned_cols=95 Identities=18% Similarity=0.077 Sum_probs=53.5
Q ss_pred HHHHHh-cCEEEEcCCCc--cCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhcc
Q 008112 334 HSIITA-SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGA 409 (577)
Q Consensus 334 deIl~~-sDGImIaRGDL--g~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~ 409 (577)
+-.++. +||+++. |=- +..+..++-..+-+..++.++ -..|||.-|. ..+-.|..+.+. |-..|+
T Consensus 39 ~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpViaGvg---------~~~t~~ai~la~~A~~~Ga 107 (303)
T 2wkj_A 39 QFNIQQGIDGLYVG-GSTGEAFVQSLSEREQVLEIVAEEAK-GKIKLIAHVG---------CVSTAESQQLAASAKRYGF 107 (303)
T ss_dssp HHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEECC---------CSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-eeccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecC---------CCCHHHHHHHHHHHHhCCC
Confidence 334444 8999985 211 122333333333334443332 2478886543 334455555444 666799
Q ss_pred ceEEeccccCCCCCHHHHHHHHHHHHHHHh
Q 008112 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (577)
Q Consensus 410 D~imLs~ETa~G~yP~eaV~~m~~I~~~aE 439 (577)
|++|+..=--...-+.+.++....|+..+.
T Consensus 108 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 137 (303)
T 2wkj_A 108 DAVSAVTPFYYPFSFEEHCDHYRAIIDSAD 137 (303)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHHT
T ss_pred CEEEecCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 999986433223335677888999988876
No 378
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=31.74 E-value=1.1e+02 Score=30.76 Aligned_cols=178 Identities=14% Similarity=0.141 Sum_probs=85.0
Q ss_pred cCEEEEcCCC-cc-CCCCCCc-----HHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhH-HHHHHHHHhccce
Q 008112 340 SDGAMVARGD-LG-AELPIEE-----VPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEV-SDIAIAVREGADA 411 (577)
Q Consensus 340 sDGImIaRGD-Lg-~elg~e~-----v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv-~Dv~nav~~G~D~ 411 (577)
.|.|++ || |+ +.+|.+. +.......-..++....|.+++- +..|.....| .+. .-+...+.-|+++
T Consensus 38 ~d~ilv--GdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD--~pfgsy~~s~--~~a~~na~rl~kaGa~a 111 (275)
T 1o66_A 38 VEMLLV--GDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSD--LPFGAYQQSK--EQAFAAAAELMAAGAHM 111 (275)
T ss_dssp CCEEEE--CTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEE--CCTTSSSSCH--HHHHHHHHHHHHTTCSE
T ss_pred CCEEEE--CHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEE--CCCCCccCCH--HHHHHHHHHHHHcCCcE
Confidence 899987 55 44 3456663 44454455555666776655532 2222111112 222 2344577789999
Q ss_pred EEeccccCCCCCHHHHHHHHHHHHHHHhcccc---------CC--CC--CCCCCcccCCChhHHHHHHHHHHHhhcCc-e
Q 008112 412 VMLSGETAHGKFPLKAVKVMHTVSLRTEATIT---------GG--AM--PPNLGQAFKNHMSEMFAYHATMMSNTLGT-S 477 (577)
Q Consensus 412 imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~---------~~--~~--~~~l~~~~~~~~~~~ia~~a~~~a~~~~a-a 477 (577)
|-|=+- . +.+..++.+. +.-++ +. .+ |.-..+ .....+.+. -...-.+.+| +
T Consensus 112 VklEdg----~---e~~~~I~al~---~agIpV~gHiGLtPQs~~~~ggf~v~gr--t~~a~~~i~--rA~a~~eAGA~~ 177 (275)
T 1o66_A 112 VKLEGG----V---WMAETTEFLQ---MRGIPVCAHIGLTPQSVFAFGGYKVQGR--GGKAQALLN--DAKAHDDAGAAV 177 (275)
T ss_dssp EEEECS----G---GGHHHHHHHH---HTTCCEEEEEESCGGGTTC-------------CHHHHHH--HHHHHHHTTCSE
T ss_pred EEECCc----H---HHHHHHHHHH---HcCCCeEeeeccCceeecccCCeEEEeC--hHHHHHHHH--HHHHHHHcCCcE
Confidence 999532 1 3333333332 33211 00 00 000011 011112221 1223345688 8
Q ss_pred EEEEcCChHHHHHHHhhCCCCeEEEEcCcHHHhhh-------hcccCCeeEEEeccCCCHHHHHHHHH
Q 008112 478 IVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQR-------LSLYQGVCPIYMEFSDDAEETFDNAL 538 (577)
Q Consensus 478 IiV~T~sG~tA~~is~~RP~~PIIAvT~~~~taR~-------L~L~~GV~Pvl~~~~~d~d~~i~~al 538 (577)
|++---.-.-++.+++-=+ +|+|.+-.-..+=-| |-++.+-.|=+.+...|..+.+..|+
T Consensus 178 ivlE~vp~~~a~~it~~l~-iP~igIGaG~~~dgQvLV~~D~lG~~~~~~pkf~k~y~~~~~~~~~a~ 244 (275)
T 1o66_A 178 VLMECVLAELAKKVTETVS-CPTIGIGAGADCDGQVLVMHDMLGIFPGKTAKFVKNFMQGHDSVQAAV 244 (275)
T ss_dssp EEEESCCHHHHHHHHHHCS-SCEEEESSCSCSSEEEECHHHHTTCSSSSCCTTCCCSSTTCSSHHHHH
T ss_pred EEEecCCHHHHHHHHHhCC-CCEEEECCCCCCCcceeeHHhhcCCCCCCCCCchhhhhhHHHHHHHHH
Confidence 8885545567888887654 899998544332222 44555666655444444333343333
No 379
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=31.73 E-value=2.4e+02 Score=27.70 Aligned_cols=118 Identities=13% Similarity=0.034 Sum_probs=68.0
Q ss_pred HHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhccccC
Q 008112 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (577)
Q Consensus 365 ~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~~ 444 (577)
-+...|+..|.++.+-. |....-..+...-..|++.+...+ .| -++.+...+++.+-. .++.
T Consensus 79 alA~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~-----~~-~~~~~~a~~~~~~~~-~~~~ 140 (311)
T 1ve5_A 79 GVAYAAQVLGVKALVVM-----------PEDASPYKKACARAYGAEVVDRGV-----TA-KNREEVARALQEETG-YALI 140 (311)
T ss_dssp HHHHHHHHHTCCEEEEC-----------CCC--CCHHHHHHHTTCEEECTTC-----CT-TTHHHHHHHHHHHHC-CEEC
T ss_pred HHHHHHHHcCCCEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECC-----CH-HHHHHHHHHHHHhcC-cEec
Confidence 46677899999987642 211112235566678998765432 23 356666666655422 2111
Q ss_pred CCCCCCCCcccCCChhHHHHHHHHHHHhhc-----Cc-eEEEEcCChHHHHHHHh----hCCCCeEEEEcCcH
Q 008112 445 GAMPPNLGQAFKNHMSEMFAYHATMMSNTL-----GT-SIVVFTRTGFMAILLSH----YRPSGTIFAFTNEK 507 (577)
Q Consensus 445 ~~~~~~l~~~~~~~~~~~ia~~a~~~a~~~-----~a-aIiV~T~sG~tA~~is~----~RP~~PIIAvT~~~ 507 (577)
.+ +.+ + ........-+.++.+++ .. .|++.+-+|.++--+++ ..|...|+++.+..
T Consensus 141 ~~-~~n---~---~~~~g~~t~~~Ei~~q~~~~~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~vigve~~~ 206 (311)
T 1ve5_A 141 HP-FDD---P---LVIAGQGTAGLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEPEA 206 (311)
T ss_dssp CS-SSS---H---HHHHHHHHHHHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGG
T ss_pred CC-CCC---c---chhhhccHHHHHHHHHHHhcCCCCCEEEEccCchHHHHHHHHHHHHhCCCCEEEEEEeCC
Confidence 11 111 0 11222233335555555 24 89999999998776664 47999999999864
No 380
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=31.61 E-value=4.2e+02 Score=26.81 Aligned_cols=120 Identities=12% Similarity=0.065 Sum_probs=71.7
Q ss_pred HHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhcccc
Q 008112 364 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATIT 443 (577)
Q Consensus 364 k~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~ 443 (577)
.-+...|+..|.++++-- |....-..+...-..|++.+... |.| -++.+...+++.+-. .++
T Consensus 121 ~a~A~aa~~~G~~~~iv~-----------P~~~~~~k~~~~~~~GA~V~~v~-----~~~-~~~~~~a~~~~~~~~-~~~ 182 (366)
T 3iau_A 121 QGVALAGQRLNCVAKIVM-----------PTTTPQIKIDAVRALGGDVVLYG-----KTF-DEAQTHALELSEKDG-LKY 182 (366)
T ss_dssp HHHHHHHHHTTCCEEEEE-----------CTTCCHHHHHHHHHTTCEEEECC-----SSH-HHHHHHHHHHHHHHT-CEE
T ss_pred HHHHHHHHHhCCceEEEe-----------CCCCCHHHHHHHHHCCCeEEEEC-----cCH-HHHHHHHHHHHHhcC-CEe
Confidence 345667899999987631 33333344666777899876664 333 467777666655432 222
Q ss_pred CCCCCCCCCcccCCChhHHHHHHHHHHHhhcCc--eEEEEcCChHHHHHHH----hhCCCCeEEEEcCcHH
Q 008112 444 GGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGT--SIVVFTRTGFMAILLS----HYRPSGTIFAFTNEKR 508 (577)
Q Consensus 444 ~~~~~~~l~~~~~~~~~~~ia~~a~~~a~~~~a--aIiV~T~sG~tA~~is----~~RP~~PIIAvT~~~~ 508 (577)
... |.+ + ........-+.++.++++. .|++.+-+|.+.--++ .+.|.+.|+++.++..
T Consensus 183 i~~-~~n---~---~~i~g~~t~~~Ei~~q~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigVe~~~~ 246 (366)
T 3iau_A 183 IPP-FDD---P---GVIKGQGTIGTEINRQLKDIHAVFIPVGGGGLIAGVATFFKQIAPNTKIIGVEPYGA 246 (366)
T ss_dssp CCS-SSS---H---HHHHHHHHHHHHHHHHCCSEEEEEEECSSSHHHHHHHHHHHHHSTTSEEEEEEEGGG
T ss_pred cCC-CCC---h---HHHHHHHHHHHHHHHhcCCCCEEEEccCchHHHHHHHHHHHHhCCCCeEEEEeecCC
Confidence 111 111 0 1112223334667777654 7899999998766554 4479999999987653
No 381
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=31.57 E-value=1.8e+02 Score=30.72 Aligned_cols=126 Identities=13% Similarity=0.087 Sum_probs=69.4
Q ss_pred HHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhccccC
Q 008112 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (577)
Q Consensus 365 ~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~~ 444 (577)
-+...|+..|.++++-. |.......+...-..|++.+....+...+ .+..+++...+++.+....++.
T Consensus 175 AlA~aaa~~Gi~~~Ivm-----------P~~~s~~k~~~l~~~GAeVv~v~~~~~~d-~~~~~~~~a~~la~~~~~~~~i 242 (435)
T 1jbq_A 175 GLALAAAVRGYRCIIVM-----------PEKMSSEKVDVLRALGAEIVRTPTNARFD-SPESHVGVAWRLKNEIPNSHIL 242 (435)
T ss_dssp HHHHHHHHHTCEEEEEE-----------CSCCCHHHHHHHHHTTCEEEECCC--------CCHHHHHHHHHHHSTTEECC
T ss_pred HHHHHHHHcCCeEEEEe-----------CCCCCHHHHHHHHhCCCEEEEecCCCCcc-hHHHHHHHHHHHHHhcCCeEEe
Confidence 46677899999987642 22222234556667899987765321111 1222445555554443322221
Q ss_pred CCCCCCCCcccCCChhHHHHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHh----hCCCCeEEEEcCcHH
Q 008112 445 GAMPPNLGQAFKNHMSEMFAYHATMMSNTLG--T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTNEKR 508 (577)
Q Consensus 445 ~~~~~~l~~~~~~~~~~~ia~~a~~~a~~~~--a-aIiV~T~sG~tA~~is~----~RP~~PIIAvT~~~~ 508 (577)
.+ |.+- . .+.....-.+.++.++++ . .||+.+-+|.++.-+++ ..|.+.||++.+...
T Consensus 243 ~q-~~n~----~-n~~ag~~t~a~EI~eQl~~~~D~vVvpvGtGGtlaGi~~~lk~~~p~vrVigVep~gs 307 (435)
T 1jbq_A 243 DQ-YRNA----S-NPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGS 307 (435)
T ss_dssp CT-TTCT----H-HHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTC
T ss_pred Cc-cCCc----c-cHHHHHHHHHHHHHHHcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCEEEEEecCCc
Confidence 11 1110 0 011112223567777764 4 89999999998766665 479999999988644
No 382
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=31.51 E-value=2.4e+02 Score=27.69 Aligned_cols=122 Identities=13% Similarity=0.084 Sum_probs=68.3
Q ss_pred HHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhccccC
Q 008112 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (577)
Q Consensus 365 ~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~~ 444 (577)
-+...|+..|.++++-. |.......+...-..|++.+....+. .| .++++...+++.+-.. ++.
T Consensus 79 a~A~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~v~~~~~~~---~~-~~~~~~a~~l~~~~~~-~~~ 142 (308)
T 2egu_A 79 GLAMVAAAKGYKAVLVM-----------PDTMSLERRNLLRAYGAELVLTPGAQ---GM-RGAIAKAEELVREHGY-FMP 142 (308)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ESCSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHHCC-BCC
T ss_pred HHHHHHHHcCCCEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECCCC---CH-HHHHHHHHHHHHHCcC-CcC
Confidence 46778899999987642 11111234555667899988775431 13 4677776666555432 111
Q ss_pred CCCCCCCCcccCCChhHHHHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHh----hCCCCeEEEEcCcHH
Q 008112 445 GAMPPNLGQAFKNHMSEMFAYHATMMSNTLG--T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTNEKR 508 (577)
Q Consensus 445 ~~~~~~l~~~~~~~~~~~ia~~a~~~a~~~~--a-aIiV~T~sG~tA~~is~----~RP~~PIIAvT~~~~ 508 (577)
. .+.+ +. + +..-...-+.++.++++ . .||+.+-+|.++--+++ ..|...||++.+...
T Consensus 143 ~-~~~n---~~-~-~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigve~~~~ 207 (308)
T 2egu_A 143 Q-QFKN---EA-N-PEIHRLTTGKEIVEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAVEPADS 207 (308)
T ss_dssp --------------------CHHHHHHHHHTTCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEEEEEECC-
T ss_pred C-cCCC---hh-H-HHHHHHHHHHHHHHHcCCCCCEEEEeeCCchhHHHHHHHHHHhCCCCEEEEEEeCCC
Confidence 1 1111 00 0 10111122345556654 4 89999999998766664 469999999988643
No 383
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=31.21 E-value=80 Score=32.05 Aligned_cols=19 Identities=0% Similarity=-0.218 Sum_probs=16.4
Q ss_pred CHHHHHHHHhcCCCEEEEc
Q 008112 278 DWDDIKFGVDNKVDFYAVS 296 (577)
Q Consensus 278 D~~dI~~al~~gvD~I~~S 296 (577)
+.++++.+.+.|+|+|.++
T Consensus 191 ~~~~a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 191 SKASAGKLYEAGAAAVDIG 209 (349)
T ss_dssp CHHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHHcCCCEEEEc
Confidence 3577888899999999997
No 384
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=31.14 E-value=3.6e+02 Score=26.48 Aligned_cols=120 Identities=14% Similarity=0.035 Sum_probs=70.3
Q ss_pred HHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhccccC
Q 008112 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (577)
Q Consensus 365 ~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~~ 444 (577)
-+...|+..|.++++-. |.......+...-..|++.+....+ |. ..++.+...+++.+.+.. +.
T Consensus 75 a~A~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~Ga~v~~~~~~---~~-~~~~~~~a~~~~~~~~~~-~~ 138 (303)
T 2v03_A 75 ALAMIAALKGYRMKLLM-----------PDNMSQERRAAMRAYGAELILVTKE---QG-MEGARDLALEMANRGEGK-LL 138 (303)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECTT---TH-HHHHHHHHHHHHHTTSCE-EC
T ss_pred HHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECCC---CC-HHHHHHHHHHHHHhCCCc-cc
Confidence 46677889999987642 2222223455666789998877542 22 335655555554432221 11
Q ss_pred CCCCCCCCcccCCCh-hH-HHHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHh----hCCCCeEEEEcCcHH
Q 008112 445 GAMPPNLGQAFKNHM-SE-MFAYHATMMSNTLG--T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTNEKR 508 (577)
Q Consensus 445 ~~~~~~l~~~~~~~~-~~-~ia~~a~~~a~~~~--a-aIiV~T~sG~tA~~is~----~RP~~PIIAvT~~~~ 508 (577)
.+ |.+ .. .. -...-+.++.++++ . .||+.+-+|.++.-+++ ..|...||++.+...
T Consensus 139 ~~-~~n-------~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~ 203 (303)
T 2v03_A 139 DQ-FNN-------PDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEG 203 (303)
T ss_dssp CT-TTC-------THHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEECTT
T ss_pred CC-cCC-------hhhHHHhcCCcHHHHHHHhCCCCCEEEEEeCccHhHHHHHHHHHHhCCCCEEEEEcCCCC
Confidence 11 111 11 11 12223466777764 4 89999999998766664 469999999998644
No 385
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A*
Probab=31.11 E-value=48 Score=33.94 Aligned_cols=57 Identities=16% Similarity=0.240 Sum_probs=33.8
Q ss_pred CCHHHHHHHHHhCCcEEEEeccCC---Ch----HHHHHHHHHHHHHHHhcCCCeeEEEeecCCC
Q 008112 121 NTREMIWKLAEAGMNVARLNMSHG---DH----ASHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (577)
Q Consensus 121 ~~~e~l~~li~~Gm~v~RiN~sHg---~~----e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~Gp 177 (577)
.+.+.++.|.+.|+|++||-++.. .+ ..-.+.++.++++.+.+..+-+.+++|+...
T Consensus 70 ~~~~d~~~l~~~G~n~vRl~i~w~~~~~~~~~~~~~~~~l~~~d~~v~~a~~~Gi~vild~h~~ 133 (395)
T 2jep_A 70 VTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNEGLYVIINIHGD 133 (395)
T ss_dssp CCHHHHHHHHHTTCCEEEECCCCGGGBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCGG
T ss_pred CcHHHHHHHHHcCCCEEEEeeeeccccCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEECCCc
Confidence 468899999999999999987641 11 0011223333333222222447889998754
No 386
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=31.00 E-value=3.1e+02 Score=27.85 Aligned_cols=149 Identities=14% Similarity=0.091 Sum_probs=0.0
Q ss_pred CCCCccCHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcC-----------------------------CCceEEE
Q 008112 272 PSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCG-----------------------------ADIHVIV 322 (577)
Q Consensus 272 p~ltekD~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~-----------------------------~~i~Iia 322 (577)
|.++..+-.++-.....+=-.|..-.|.+.+.+..+.+...+.+ ..++|..
T Consensus 8 ~~~~~n~~~~ll~~A~~~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~g~~~~~~~~~~A~~~~VPVaL 87 (306)
T 3pm6_A 8 PSLKSNRALPLLTFARTHSFAIPAICVYNLEGILAIIRAAEHKRSPAMILLFPWAIQYADSLLVRTAASACRAASVPITL 87 (306)
T ss_dssp --CTTCSSHHHHHHHHHTTCCEEEEECSSHHHHHHHHHHHHHTTCCEEEEECHHHHHHHTTHHHHHHHHHHHHCSSCEEE
T ss_pred CCCCccHHHHHHHHHHHCCcEEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhccHHHHHHHHHHHHHCCCCEEE
Q ss_pred eecChhhHhhHHHHHHh---------cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCC
Q 008112 323 KIESADSIPNLHSIITA---------SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTP 393 (577)
Q Consensus 323 KIEt~~gv~NldeIl~~---------sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~P 393 (577)
.+......+.+..-++. ..-+|+. +-++|+++=...-+++++.|++.|..|=.=-..+.--...-.-
T Consensus 88 HlDHg~~~e~i~~ai~~~~~~~~~~GFtSVMiD----gS~~p~eENi~~Tk~vv~~ah~~gvsVEaElG~igG~Edgv~~ 163 (306)
T 3pm6_A 88 HLDHAQDPEIIKRAADLSRSETHEPGFDSIMVD----MSHFSKEENLRLTRELVAYCNARGIATEAEPGRIEGGEDGVQD 163 (306)
T ss_dssp EEEEECCHHHHHHHHHTC------CCCSEEEEC----CTTSCHHHHHHHHHHHHHHHHTTTCEEEECSSBCCCCBTTBCC
T ss_pred EcCCCCCHHHHHHHHHhhhhccCCCCCCEEEEe----CCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCccc
Q ss_pred C------hHhHHHHHHHHHhccceEEeccccCCCCCH
Q 008112 394 T------RAEVSDIAIAVREGADAVMLSGETAHGKFP 424 (577)
Q Consensus 394 t------rAEv~Dv~nav~~G~D~imLs~ETa~G~yP 424 (577)
+ .....++..++.-|+|++-.+-=|+.|.|+
T Consensus 164 ~~~~~~~yT~Peea~~Fv~TgvD~LAvaiGt~HG~Yk 200 (306)
T 3pm6_A 164 TVDLEGVLTTPEESEEFVATGINWLAPAFGNVHGNYG 200 (306)
T ss_dssp CTTCCCBCCCHHHHHHHHTTTCSEECCCSSCCSSCCC
T ss_pred cccccccCCCHHHHHHHHHcCCCEEEEEcCccccCcC
No 387
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=30.99 E-value=1.9e+02 Score=30.00 Aligned_cols=94 Identities=22% Similarity=0.314 Sum_probs=49.5
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcC-CCccCCCCCCcHHHHHHHHHHHHHHcCCce
Q 008112 300 DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVAR-GDLGAELPIEEVPLLQEEIIRTCRSMGKAV 377 (577)
Q Consensus 300 sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaR-GDLg~elg~e~v~~~qk~Ii~~c~~aGKPv 377 (577)
+.+.++++++.. +++++.|. ....+......+. +|+|.|+- |.-..+-+...+. ..+++ ....+.|+
T Consensus 213 ~~~~i~~i~~~~-----~~Pv~vkg--v~t~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~-~l~~v---~~~~~~pV 281 (380)
T 1p4c_A 213 NWEALRWLRDLW-----PHKLLVKG--LLSAEDADRCIAEGADGVILSNHGGRQLDCAISPME-VLAQS---VAKTGKPV 281 (380)
T ss_dssp CHHHHHHHHHHC-----CSEEEEEE--ECCHHHHHHHHHTTCSEEEECCGGGTSCTTCCCGGG-THHHH---HHHHCSCE
T ss_pred cHHHHHHHHHhc-----CCCEEEEe--cCcHHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHH-HHHHH---HHHcCCeE
Confidence 356666666543 46777772 1233334444444 88998841 1100111111111 11222 23346688
Q ss_pred EEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEecc
Q 008112 378 IVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG 416 (577)
Q Consensus 378 i~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ 416 (577)
|....+- -..|+..++..|+|++++..
T Consensus 282 ia~GGI~------------~~~dv~kal~~GAdaV~iGr 308 (380)
T 1p4c_A 282 LIDSGFR------------RGSDIVKALALGAEAVLLGR 308 (380)
T ss_dssp EECSSCC------------SHHHHHHHHHTTCSCEEESH
T ss_pred EEECCCC------------CHHHHHHHHHhCCcHhhehH
Confidence 8643322 23678899999999999863
No 388
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2
Probab=30.87 E-value=61 Score=33.11 Aligned_cols=84 Identities=18% Similarity=0.317 Sum_probs=57.6
Q ss_pred CceEEEeecCh--------hhHhhHHHHHH-hcCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhh
Q 008112 317 DIHVIVKIESA--------DSIPNLHSIIT-ASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESM 387 (577)
Q Consensus 317 ~i~IiaKIEt~--------~gv~NldeIl~-~sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM 387 (577)
.++++++.|+. .-.+.++.++. ...+|++.|||+- -+.+++.|++.|.|++. |.
T Consensus 49 RVQi~Gn~E~~yL~~L~~e~~~~rler~l~~~~P~IIltrg~~~-----------peelie~A~~~~IPVL~-T~----- 111 (314)
T 1ko7_A 49 RIQLLGTTELSFYNLLPDEERKGRMRKLCRPETPAIIVTRDLEP-----------PEELIEAAKEHETPLIT-SK----- 111 (314)
T ss_dssp SEEEECHHHHHHHHHSCHHHHTTHHHHHCCTTCCCEEECTTCCC-----------CHHHHHHHHHTTCCEEE-CC-----
T ss_pred cEEEEechhHHHHHhcCHHHHHHHHHHHhcCCCCEEEEeCCCCC-----------CHHHHHHHHHCCCeEEE-EC-----
Confidence 56666666552 12234455543 2669999999983 23588999999999885 33
Q ss_pred hcCCCCChHhHHHHHHHHHh----------------ccceEEeccccCCCC
Q 008112 388 IVHPTPTRAEVSDIAIAVRE----------------GADAVMLSGETAHGK 422 (577)
Q Consensus 388 ~~~~~PtrAEv~Dv~nav~~----------------G~D~imLs~ETa~G~ 422 (577)
.+|-.-+..+.+++.. | -++++.|++-.||
T Consensus 112 ----~~ts~~~~~l~~~l~~~~~~~~~~H~~~v~~~g-~~vl~~G~sG~GK 157 (314)
T 1ko7_A 112 ----IATTQLMSRLTTFLEHELARTTSLHGVLVDVYG-VGVLITGDSGIGK 157 (314)
T ss_dssp ----SCHHHHHHHHHHHHHHHTCEEEEEESEEEEETT-EEEEEEESTTSSH
T ss_pred ----CchhHHHHHHHHHHHHhhccceeeeEEEEEECC-EEEEEEeCCCCCH
Confidence 4455555666777665 4 5899999999998
No 389
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=30.84 E-value=2.6e+02 Score=28.07 Aligned_cols=89 Identities=17% Similarity=0.187 Sum_probs=51.0
Q ss_pred cCEEEEcCCCc--cCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHH-HHHHhccceEEecc
Q 008112 340 SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIA-IAVREGADAVMLSG 416 (577)
Q Consensus 340 sDGImIaRGDL--g~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~-nav~~G~D~imLs~ 416 (577)
+||+++. |=- +..+..++-..+.+..++.++ -..|||.-|. ..+-+|..+.+ .|-..|+|++|+..
T Consensus 58 v~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~-grvpViaGvg---------~~st~eai~la~~A~~~Gadavlv~~ 126 (314)
T 3qze_A 58 TNAIVAV-GTTGESATLDVEEHIQVIRRVVDQVK-GRIPVIAGTG---------ANSTREAVALTEAAKSGGADACLLVT 126 (314)
T ss_dssp CCEEEES-SGGGTGGGCCHHHHHHHHHHHHHHHT-TSSCEEEECC---------CSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeCC---------CcCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 8999984 111 122333333333334444332 2368887543 33444555544 47778999999864
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHh
Q 008112 417 ETAHGKFPLKAVKVMHTVSLRTE 439 (577)
Q Consensus 417 ETa~G~yP~eaV~~m~~I~~~aE 439 (577)
=--...-+.+.++....|+..+.
T Consensus 127 P~y~~~s~~~l~~~f~~va~a~~ 149 (314)
T 3qze_A 127 PYYNKPTQEGMYQHFRHIAEAVA 149 (314)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHSC
T ss_pred CCCCCCCHHHHHHHHHHHHHhcC
Confidence 32222335678888889988775
No 390
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=30.80 E-value=57 Score=31.93 Aligned_cols=52 Identities=25% Similarity=0.364 Sum_probs=32.3
Q ss_pred CHHHHHHHHHhCCcEEEEeccCC---ChHHHHHHHHHHHHHHHhcCCCeeEEEeecCCC
Q 008112 122 TREMIWKLAEAGMNVARLNMSHG---DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (577)
Q Consensus 122 ~~e~l~~li~~Gm~v~RiN~sHg---~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~Gp 177 (577)
+.+.++.|-+.|+|++|+-++.| ..+.... ++.+=+...+.| +-+++|+.+.
T Consensus 33 ~~~~~~~i~~~G~N~VRi~~~~~~~~~~~~~~~-ld~~v~~a~~~G---i~Vild~H~~ 87 (294)
T 2whl_A 33 ASTAIPAIAEQGANTIRIVLSDGGQWEKDDIDT-IREVIELAEQNK---MVAVVEVHDA 87 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEEECCSSSSCCCCHHH-HHHHHHHHHTTT---CEEEEEECTT
T ss_pred hHHHHHHHHHcCCCEEEEEecCCCccCccHHHH-HHHHHHHHHHCC---CEEEEEeccC
Confidence 46789999999999999988643 1122222 222222333444 7788898654
No 391
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=30.80 E-value=43 Score=34.95 Aligned_cols=46 Identities=15% Similarity=0.261 Sum_probs=36.3
Q ss_pred EecCCCCCCHHHHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHHH
Q 008112 114 CTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEY 159 (577)
Q Consensus 114 ~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~ 159 (577)
+.+|-...+.+.++.++++|++++=++.+||..+...++++.+|+.
T Consensus 93 ~~~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~ 138 (361)
T 3r2g_A 93 VSVGCTENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQL 138 (361)
T ss_dssp EEECSSHHHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHH
T ss_pred EEcCCCHHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHh
Confidence 3445444567889999999999999999999887767777777763
No 392
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=30.71 E-value=3.1e+02 Score=27.74 Aligned_cols=95 Identities=20% Similarity=0.109 Sum_probs=52.6
Q ss_pred HHHHHh-cCEEEEcCCCc--cCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhcc
Q 008112 334 HSIITA-SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGA 409 (577)
Q Consensus 334 deIl~~-sDGImIaRGDL--g~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~ 409 (577)
+-.++. +|||++. |=- +..+..++-..+-+..++.++ -..|||.-|. ..+-+|..+.+. |-..|+
T Consensus 62 ~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~-grvpViaGvg---------~~st~eai~la~~A~~~Ga 130 (332)
T 2r8w_A 62 ARLDAAEVDSVGIL-GSTGIYMYLTREERRRAIEAAATILR-GRRTLMAGIG---------ALRTDEAVALAKDAEAAGA 130 (332)
T ss_dssp HHHHHHTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEEEC---------CSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecC---------CCCHHHHHHHHHHHHhcCC
Confidence 334444 8999985 111 122333333333333333332 2478886553 234456555554 666799
Q ss_pred ceEEeccccCCCCCHHHHHHHHHHHHHHHh
Q 008112 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (577)
Q Consensus 410 D~imLs~ETa~G~yP~eaV~~m~~I~~~aE 439 (577)
|++|+..=--...-+.+.++....|+..+.
T Consensus 131 davlv~~P~Y~~~s~~~l~~~f~~VA~a~~ 160 (332)
T 2r8w_A 131 DALLLAPVSYTPLTQEEAYHHFAAVAGATA 160 (332)
T ss_dssp SEEEECCCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999996433222334667888888887765
No 393
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=30.71 E-value=3e+02 Score=27.60 Aligned_cols=133 Identities=12% Similarity=0.140 Sum_probs=77.1
Q ss_pred CCCCCccCHHHHHHHHhcCCCEEEEcC-------------CCCHHHHHHHHHHHHhcCCCceEEEeecC-------hhhH
Q 008112 271 LPSITEKDWDDIKFGVDNKVDFYAVSF-------------VKDAQVVHELKNYLKSCGADIHVIVKIES-------ADSI 330 (577)
Q Consensus 271 lp~ltekD~~dI~~al~~gvD~I~~Sf-------------V~sa~dv~~lr~~l~~~~~~i~IiaKIEt-------~~gv 330 (577)
+..+|-+|.---+.+-+.|+|.|.+.. --+.+++...-+.+...-....|++=++- .+++
T Consensus 36 i~~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~ 115 (281)
T 1oy0_A 36 WAMLTAYDYSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAAL 115 (281)
T ss_dssp EEEEECCSHHHHHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEECCTTSSTTCHHHHH
T ss_pred EEEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEECCCCcccCCHHHHH
Confidence 345578888888888889999997752 01234444333444444455777776663 3467
Q ss_pred hhHHHHHH-h-cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceE----EEehhh---HhhhcCCCCC--hHhHH
Q 008112 331 PNLHSIIT-A-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVI----VATNML---ESMIVHPTPT--RAEVS 399 (577)
Q Consensus 331 ~NldeIl~-~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi----~ATq~L---eSM~~~~~Pt--rAEv~ 399 (577)
+|.-.+++ . +++|-+--|+ .+...|+++.++|+||+ +--|-. ....-..+.. ..-+.
T Consensus 116 ~na~rl~~eaGa~aVklEdg~------------e~~~~I~al~~agIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~ 183 (281)
T 1oy0_A 116 AAATRFLKDGGAHAVKLEGGE------------RVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIA 183 (281)
T ss_dssp HHHHHHHHTTCCSEEEEEBSG------------GGHHHHHHHHHHTCCEEEEEECCC--------------CHHHHHHHH
T ss_pred HHHHHHHHHhCCeEEEECCcH------------HHHHHHHHHHHCCCCEEeeecCCcceecccCCeEEEeCcHHHHHHHH
Confidence 77888887 3 8999886441 23455667778999987 111111 1010111110 12234
Q ss_pred HHHHHHHhccceEEec
Q 008112 400 DIAIAVREGADAVMLS 415 (577)
Q Consensus 400 Dv~nav~~G~D~imLs 415 (577)
|.......|+|+++|-
T Consensus 184 rA~a~~eAGA~~ivlE 199 (281)
T 1oy0_A 184 DAIAVAEAGAFAVVME 199 (281)
T ss_dssp HHHHHHHHTCSEEEEE
T ss_pred HHHHHHHcCCcEEEEe
Confidence 5556777899999884
No 394
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=30.66 E-value=5.2e+02 Score=27.54 Aligned_cols=112 Identities=13% Similarity=0.053 Sum_probs=79.0
Q ss_pred cCHHHHHHHHhcCCCEEEE-----cCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCCCc
Q 008112 277 KDWDDIKFGVDNKVDFYAV-----SFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDL 350 (577)
Q Consensus 277 kD~~dI~~al~~gvD~I~~-----SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGDL 350 (577)
.|...+..+.+.|+..|.+ -|=.+.+|+.++|+.. +++|+.|==-.... .+.+.... +|+|.+--.-|
T Consensus 68 ~~~~~iA~~y~~~A~~IsvLTd~~~F~gs~~dL~~vr~~v-----~lPvLrKDFI~d~~-Qi~ea~~~GAD~ILLi~a~l 141 (452)
T 1pii_A 68 FDPARIAAIYKHYASAISVLTDEKYFQGSFNFLPIVSQIA-----PQPILCKDFIIDPY-QIYLARYYQADACLLMLSVL 141 (452)
T ss_dssp CCHHHHHHHHTTTCSEEEEECCSTTTCCCTTHHHHHHHHC-----CSCEEEESCCCSHH-HHHHHHHTTCSEEEEETTTC
T ss_pred CCHHHHHHHHHhhCcEEEEEecccccCCCHHHHHHHHHhc-----CCCeEEEeccCCHH-HHHHHHHcCCCEEEEEcccC
Confidence 4778888888878999988 5667999999999864 67888872112333 35554444 99888743322
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEecc
Q 008112 351 GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG 416 (577)
Q Consensus 351 g~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ 416 (577)
+ ..--++++..|+..|..+++-.+ |.+| +..|+..|+|.|-.+.
T Consensus 142 ----~----~~~l~~l~~~a~~lgm~~LvEvh-----------~~eE---~~~A~~lga~iIGinn 185 (452)
T 1pii_A 142 ----D----DDQYRQLAAVAHSLEMGVLTEVS-----------NEEE---QERAIALGAKVVGINN 185 (452)
T ss_dssp ----C----HHHHHHHHHHHHHTTCEEEEEEC-----------SHHH---HHHHHHTTCSEEEEES
T ss_pred ----C----HHHHHHHHHHHHHcCCeEEEEeC-----------CHHH---HHHHHHCCCCEEEEeC
Confidence 2 24457889999999999998655 4444 5577788999888754
No 395
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=30.66 E-value=73 Score=31.68 Aligned_cols=22 Identities=36% Similarity=0.421 Sum_probs=19.3
Q ss_pred CCHHHHHHHHHhCCcEEEEecc
Q 008112 121 NTREMIWKLAEAGMNVARLNMS 142 (577)
Q Consensus 121 ~~~e~l~~li~~Gm~v~RiN~s 142 (577)
.+.+.++.|.+.|+|++||-++
T Consensus 29 ~~~~d~~~i~~~G~n~vRi~i~ 50 (343)
T 1ceo_A 29 ITEKDIETIAEAGFDHVRLPFD 50 (343)
T ss_dssp SCHHHHHHHHHHTCCEEEEEEE
T ss_pred cCHHHHHHHHHcCCCEEEecCC
Confidence 3578899999999999999875
No 396
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=30.63 E-value=79 Score=31.72 Aligned_cols=84 Identities=18% Similarity=0.194 Sum_probs=54.2
Q ss_pred cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcC-CceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEecccc
Q 008112 340 SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMG-KAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGET 418 (577)
Q Consensus 340 sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aG-KPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ET 418 (577)
+|.||--....|...|+.. +...+.+.+. ... .|||++..+ -|. +|++.++..|+|+|++..=-
T Consensus 146 ~~aVmPlg~pIGsG~Gi~~-~~~L~~i~~~--~~~~vPVI~~GGI---------~tp---sDAa~AmeLGAdgVlVgSAI 210 (268)
T 2htm_A 146 TATVMPLAAPIGSGWGVRT-RALLELFARE--KASLPPVVVDAGL---------GLP---SHAAEVMELGLDAVLVNTAI 210 (268)
T ss_dssp CSCBEEBSSSTTTCCCSTT-HHHHHHHHHT--TTTSSCBEEESCC---------CSH---HHHHHHHHTTCCEEEESHHH
T ss_pred CCEEEecCccCcCCcccCC-HHHHHHHHHh--cCCCCeEEEeCCC---------CCH---HHHHHHHHcCCCEEEEChHH
Confidence 6677753444455555545 3443333221 234 899986543 343 56999999999999998766
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q 008112 419 AHGKFPLKAVKVMHTVSLRT 438 (577)
Q Consensus 419 a~G~yP~eaV~~m~~I~~~a 438 (577)
+.++.|.+-.+.|..-++.-
T Consensus 211 ~~a~dP~~ma~af~~Av~ag 230 (268)
T 2htm_A 211 AEAQDPPAMAEAFRLAVEAG 230 (268)
T ss_dssp HTSSSHHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHHH
Confidence 78888987777776654443
No 397
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=30.56 E-value=58 Score=32.24 Aligned_cols=75 Identities=20% Similarity=0.170 Sum_probs=50.1
Q ss_pred HHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEE-EeecChhhHh--------hHHHHHHh-cCEEEEcCCCccC
Q 008112 283 KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVI-VKIESADSIP--------NLHSIITA-SDGAMVARGDLGA 352 (577)
Q Consensus 283 ~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~Ii-aKIEt~~gv~--------NldeIl~~-sDGImIaRGDLg~ 352 (577)
+.+.+.|+|++.+| +.++..+|+.+ +.+..++ .=|- ++|-+ +..+.++. +|.+.+||+=++.
T Consensus 169 ~~a~~aG~~GvV~s----a~e~~~iR~~~---g~~fl~VtPGIr-~qg~~~~dQ~Rv~t~~~a~~aGad~iVvGr~I~~a 240 (255)
T 3ldv_A 169 TLTKNAGLDGVVCS----AQEASLLKQHL---GREFKLVTPGIR-PAGSEQGDQRRIMTPAQAIASGSDYLVIGRPITQA 240 (255)
T ss_dssp HHHHHTTCSEEECC----HHHHHHHHHHH---CTTSEEEEECCC-CTTSTTSSCSSSCCHHHHHHTTCSEEEECHHHHTC
T ss_pred HHHHHcCCCEEEEC----HHHHHHHHHhc---CCCcEEEeCCcc-cCcCCccceeccCCHHHHHHcCCCEEEECHHHhCC
Confidence 34567899999876 78899998876 5565554 5553 33433 46677766 9999999987776
Q ss_pred CCCCCcHHHHHHH
Q 008112 353 ELPIEEVPLLQEE 365 (577)
Q Consensus 353 elg~e~v~~~qk~ 365 (577)
+=|.+.+..++++
T Consensus 241 ~dp~~a~~~i~~e 253 (255)
T 3ldv_A 241 AHPEVVLEEINSS 253 (255)
T ss_dssp SCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHh
Confidence 6554444444433
No 398
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=30.56 E-value=2.8e+02 Score=25.70 Aligned_cols=37 Identities=8% Similarity=0.014 Sum_probs=27.1
Q ss_pred HHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 008112 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGAD 317 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~ 317 (577)
+.++++.+.|+|+|=+.+- ...++.++++.+++.|-.
T Consensus 19 ~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~l~~~gl~ 55 (260)
T 1k77_A 19 ERFAAARKAGFDAVEFLFP-YNYSTLQIQKQLEQNHLT 55 (260)
T ss_dssp GHHHHHHHHTCSEEECSCC-TTSCHHHHHHHHHHTTCE
T ss_pred HHHHHHHHhCCCEEEecCC-CCCCHHHHHHHHHHcCCc
Confidence 4567788899999988753 345678888888776544
No 399
>3kw2_A Probable R-RNA methyltransferase; structural genomics, unknown function, PSI-2, protein structure initiative; HET: MSE ADN; 2.00A {Porphyromonas gingivalis atcc 33277}
Probab=30.46 E-value=83 Score=31.04 Aligned_cols=71 Identities=14% Similarity=0.152 Sum_probs=42.3
Q ss_pred cCCCCEEEEeCC---eEEEEEEEEeCCeEEEEEeeCcEeccC--ceeeeCCCCCCCCCCCccCHHHHHHHHhcCCCEEE
Q 008112 221 VEVGDMLLVDGG---MMSLLVKSKTEDSVKCEVVDGGELKSR--RHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYA 294 (577)
Q Consensus 221 v~~Gd~I~idDG---~i~l~V~~v~~~~v~~~v~~gG~l~s~--Kginlp~~~~~lp~ltekD~~dI~~al~~gvD~I~ 294 (577)
+++||.|.+-|| ....++.+++++.+.+++..--..... -.+.|= ..+|.-.++-...|+.+.+.|++-|.
T Consensus 33 l~~Gd~v~l~dg~g~~~~a~I~~i~~~~~~~~i~~~~~~~~e~~~~i~L~---~al~K~~dr~d~iiqKatELGV~~I~ 108 (257)
T 3kw2_A 33 MQAGDRLRLTDGRGSFFDAVIETADRKSCYVSVCGQESWQKPWRDRITIA---IAPTKQSERMEWMLEKLVEIGVDEVV 108 (257)
T ss_dssp CCTTCEEEEECSBSEEEEEEEEEECSSCEEEEEEEEEECCCSSCSCEEEE---ECCCSSHHHHHHHHHHHHHHCCSEEE
T ss_pred CCCCCEEEEEECCCCEEEEEEEEeeCCEEEEEEEEecccCCCCCCceEEE---EecCCCcchHHHHHHHHHhhCCCEEE
Confidence 578999998765 467788889999888877652221111 111110 11222113334457889999999764
No 400
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=30.37 E-value=2.2e+02 Score=28.22 Aligned_cols=103 Identities=14% Similarity=0.174 Sum_probs=60.0
Q ss_pred cCHHH-HHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCC-CceEEEee-------c--ChhhHhhHHHHHHhcCEEEE
Q 008112 277 KDWDD-IKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGA-DIHVIVKI-------E--SADSIPNLHSIITASDGAMV 345 (577)
Q Consensus 277 kD~~d-I~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~-~i~IiaKI-------E--t~~gv~NldeIl~~sDGImI 345 (577)
.|.+. |+.+.+.|++.++++- .+.++...+.++...... ...+++-+ . +.+-++.+++.++.-..+-|
T Consensus 17 ~d~~~vl~~a~~~gV~~~v~~g-~~~~~~~~~~~la~~~~~~~~~v~~~~GiHP~~~~~~~~~~~~~l~~l~~~~~vvaI 95 (287)
T 3rcm_A 17 DQQAAIVERALEAGVTQMLLTG-TSLAVSEQALELCQQLDASGAHLFATAGVHPHDAKAWDTDSERQLRLLLSEPRVRAV 95 (287)
T ss_dssp TCHHHHHHHHHHTTEEEEEECC-CSHHHHHHHHHHHHHHCTTSSSEEEEECCCGGGGGGCCTTHHHHHHHHHTSTTEEEE
T ss_pred cCHHHHHHHHHHcCCeEEEEec-CCHHHHHHHHHHHHhCCCCCceEEEEEEECcCccccCCHHHHHHHHHHhcCCCeEEE
Confidence 35444 6778899999887764 467787777776654322 12233322 1 12334555555543334445
Q ss_pred cCCCccCCCCCC-cHHHHH----HHHHHHHHHcCCceEEEeh
Q 008112 346 ARGDLGAELPIE-EVPLLQ----EEIIRTCRSMGKAVIVATN 382 (577)
Q Consensus 346 aRGDLg~elg~e-~v~~~q----k~Ii~~c~~aGKPvi~ATq 382 (577)
|..|.+.... .-...| ++.++.|++.|+|+++-+.
T Consensus 96 --GEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~r 135 (287)
T 3rcm_A 96 --GECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHER 135 (287)
T ss_dssp --EEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred --EEeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 5555555332 123445 4567889999999998653
No 401
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=30.31 E-value=88 Score=32.30 Aligned_cols=45 Identities=16% Similarity=0.220 Sum_probs=34.6
Q ss_pred HHHHHHhCCcEEEEeccCCChHHHHHHHHHHHHHHHhcCCCeeEEEeec
Q 008112 126 IWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDT 174 (577)
Q Consensus 126 l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl 174 (577)
.+++.++|.+.+.|+..|++.+.-.+.++.+|++ ++ ..+.|++|.
T Consensus 173 a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a---~g-~~~~l~vDa 217 (392)
T 1tzz_A 173 MRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEE---IG-KDAQLAVDA 217 (392)
T ss_dssp HHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHH---HT-TTCEEEEEC
T ss_pred HHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHh---cC-CCCeEEEEC
Confidence 4667889999999999998887777888888765 34 445666775
No 402
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=30.31 E-value=1.9e+02 Score=29.35 Aligned_cols=129 Identities=16% Similarity=0.209 Sum_probs=75.7
Q ss_pred HHHHHhcCCCEEEEc--------------CCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEc
Q 008112 282 IKFGVDNKVDFYAVS--------------FVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVA 346 (577)
Q Consensus 282 I~~al~~gvD~I~~S--------------fV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIa 346 (577)
-+-+-+.|+..|++- -..++++|+++++.+ +++||+|.---. +.....+.+. +|.|
T Consensus 24 a~iae~aGa~av~~l~~~p~d~r~~gGv~Rm~dp~~I~~I~~aV-----sIPVm~k~righ-~~EAqilea~GaD~I--- 94 (291)
T 3o07_A 24 AKIAEKSGACAVMALESIPADMRKSGKVCRMSDPKMIKDIMNSV-----SIPVMAKVRIGH-FVEAQIIEALEVDYI--- 94 (291)
T ss_dssp HHHHHHHTCSEEEECSSCHHHHHTTTCCCCCCCHHHHHHHHTTC-----SSCEEEEEETTC-HHHHHHHHHTTCSEE---
T ss_pred HHHHHHhCchhhhhccCCCchhhhcCCccccCCHHHHHHHHHhC-----CCCeEEEEecCc-HHHHHHHHHcCCCEE---
Confidence 344556677776643 234566666666533 688888753321 2222222222 7766
Q ss_pred CCCccCC-CCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHH
Q 008112 347 RGDLGAE-LPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPL 425 (577)
Q Consensus 347 RGDLg~e-lg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~ 425 (577)
|=+-- .|.+.+..+.| ++.+.|+.+-. ....+.-.++..|+|.|--++|.-.|+ -+
T Consensus 95 --Desevltpad~~~~I~k------~~f~vpfv~~~--------------~~l~EAlrri~eGA~mIrTtge~gtg~-v~ 151 (291)
T 3o07_A 95 --DESEVLTPADWTHHIEK------DKFKVPFVCGA--------------KDLGEALRRINEGAAMIRTKGEAGTGD-VS 151 (291)
T ss_dssp --EEETTSCCSCSSCCCCG------GGCSSCEEEEE--------------SSHHHHHHHHHHTCSEEEECCCTTSCC-TH
T ss_pred --ecccCCCHHHHHHHhhh------hcCCCcEEeeC--------------CCHHHHHHHHHCCCCEEEecCcCCCcc-HH
Confidence 22111 12221111111 23467765322 223456789999999999999999998 67
Q ss_pred HHHHHHHHHHHHHhccc
Q 008112 426 KAVKVMHTVSLRTEATI 442 (577)
Q Consensus 426 eaV~~m~~I~~~aE~~~ 442 (577)
|||+-|+.|-.+.-...
T Consensus 152 ~av~h~r~~~~~i~~l~ 168 (291)
T 3o07_A 152 EAVKHIRRITEEIKACQ 168 (291)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999988887543
No 403
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=30.15 E-value=85 Score=28.67 Aligned_cols=58 Identities=14% Similarity=0.203 Sum_probs=40.7
Q ss_pred EEcCCCEEEEEEec--CC---CCceEEeccccccccc---cCCCCEEEEeCCeEEEEEEEEeCCeEEE
Q 008112 189 TLTSGQEFTFTIQR--GV---GSAECVSVNYDDFVND---VEVGDMLLVDGGMMSLLVKSKTEDSVKC 248 (577)
Q Consensus 189 ~L~~G~~v~lt~~~--~~---~~~~~i~v~~~~~~~~---v~~Gd~I~idDG~i~l~V~~v~~~~v~~ 248 (577)
..+.|++.+|+... .. +......++-..|.+. +++|+.+.+++ . ..+|++++++.|+.
T Consensus 63 gm~~Ge~~~v~Ipp~~aYG~~~~~~V~~v~~~~f~~~~~~~~~G~~~~~~~-~-~~~V~~v~~~~V~v 128 (157)
T 3pr9_A 63 EMDVGEEREVVLPPEKAFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDG-I-PGKIVSINSGRVLV 128 (157)
T ss_dssp HCCTTCEEEEEECGGGTTCCCCGGGEEEEEHHHHHHTTCCCCTTCEEEETT-E-EEEEEEEETTEEEE
T ss_pred CCCCCCEEEEEECcHHhcCCCChHhEEEcCHHHCCcccCCcCCCcEEEecC-C-CeEEEEEcCCEEEE
Confidence 46899999999762 22 3344556676677652 57799999964 3 46889998887754
No 404
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=30.00 E-value=81 Score=32.58 Aligned_cols=62 Identities=15% Similarity=0.195 Sum_probs=41.3
Q ss_pred CcEEEEecCCCCCCHH----HHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHHHHHhcCCCeeEEEeec
Q 008112 109 KTKIVCTIGPSTNTRE----MIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDT 174 (577)
Q Consensus 109 ~tKIi~TiGPs~~~~e----~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl 174 (577)
+....+|+|....+++ ..+++.++|.+.+.|++.|++.+.-.+.++.||+ .+| ..+.|++|.
T Consensus 132 ~vp~y~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~---a~G-~~~~l~vDa 197 (389)
T 2oz8_A 132 RVKAYASGLDFHLDDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKT---CVP-AGSKVMIDP 197 (389)
T ss_dssp EEEEEEECCBTTCCHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHT---TSC-TTCEEEEEC
T ss_pred ceEEEEeCCCcCCCHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHH---hhC-CCCeEEEEC
Confidence 4456666654222443 3466788999999999999888766677776665 344 445666665
No 405
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=29.94 E-value=93 Score=31.89 Aligned_cols=60 Identities=17% Similarity=0.184 Sum_probs=40.8
Q ss_pred CcEEEEecCCCCCCHHH----HHHHHHhCCcEEEEeccCCChHHHHHHHHHHHHHHHhcCCCeeEEEeec
Q 008112 109 KTKIVCTIGPSTNTREM----IWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDT 174 (577)
Q Consensus 109 ~tKIi~TiGPs~~~~e~----l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl 174 (577)
+....+|+|- .++|. .+++.++|.+.+.+++.|++.+.-.+.++.+|+ ..+ ..+.+++|.
T Consensus 134 ~v~~~~~~~~--~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~---a~g-~~~~l~vDa 197 (378)
T 2qdd_A 134 PVPINSSIST--GTPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISA---GLP-DGHRVTFDV 197 (378)
T ss_dssp CEEBEEEECS--CCHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHH---SCC-TTCEEEEEC
T ss_pred CCceEEEecC--CCHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHHHHHHH---HhC-CCCEEEEeC
Confidence 4556678764 34443 456788999999999999877766677777765 344 345566664
No 406
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=29.92 E-value=1.7e+02 Score=29.88 Aligned_cols=66 Identities=11% Similarity=0.077 Sum_probs=49.6
Q ss_pred HHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEE
Q 008112 303 VVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (577)
Q Consensus 303 dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~A 380 (577)
-+..+.+.+.+.|..+.+-+--+.... +.++++.-.|.|+.+-.+ ...+..+-..|+++++|.|.+
T Consensus 91 Ka~~~~~~l~~lnp~v~v~~~~~~~~~--~~~~~~~~~dvVv~~~d~----------~~~r~~ln~~~~~~~ip~i~~ 156 (346)
T 1y8q_A 91 RAEASLERAQNLNPMVDVKVDTEDIEK--KPESFFTQFDAVCLTCCS----------RDVIVKVDQICHKNSIKFFTG 156 (346)
T ss_dssp HHHHHHHHHHHTCTTSEEEEECSCGGG--CCHHHHTTCSEEEEESCC----------HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhHCCCeEEEEEecccCc--chHHHhcCCCEEEEcCCC----------HHHHHHHHHHHHHcCCCEEEE
Confidence 356677778888888888776665544 567888889988876322 356778999999999999875
No 407
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=29.89 E-value=1.8e+02 Score=28.71 Aligned_cols=29 Identities=10% Similarity=-0.001 Sum_probs=22.1
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHhCCcEEEEec
Q 008112 109 KTKIVCTIGPSTNTREMIWKLAEAGMNVARLNM 141 (577)
Q Consensus 109 ~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~ 141 (577)
.+++.+ +.| +.+.+++.+++|++.+++-+
T Consensus 72 ~~~v~~-l~~---n~~~i~~a~~~G~~~V~i~~ 100 (295)
T 1ydn_A 72 GVRYSV-LVP---NMKGYEAAAAAHADEIAVFI 100 (295)
T ss_dssp SSEEEE-ECS---SHHHHHHHHHTTCSEEEEEE
T ss_pred CCEEEE-EeC---CHHHHHHHHHCCCCEEEEEE
Confidence 456643 333 58899999999999999974
No 408
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=29.54 E-value=1.3e+02 Score=30.00 Aligned_cols=100 Identities=14% Similarity=0.166 Sum_probs=55.1
Q ss_pred CCCCHHHHHHHHHHHHhcCCCceEEEee----cChhhHhhHHHHHHh-cCEEEEcCC-CccCCCCCCcHHHHHHHHHHHH
Q 008112 297 FVKDAQVVHELKNYLKSCGADIHVIVKI----ESADSIPNLHSIITA-SDGAMVARG-DLGAELPIEEVPLLQEEIIRTC 370 (577)
Q Consensus 297 fV~sa~dv~~lr~~l~~~~~~i~IiaKI----Et~~gv~NldeIl~~-sDGImIaRG-DLg~elg~e~v~~~qk~Ii~~c 370 (577)
+.++++-+.++.+.+.+.- ..+|..|| +..+.++-+..+.+. +|+|.|--+ ....--+...+ ..+...
T Consensus 107 l~~~~~~~~eiv~~v~~~~-~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~-----~~i~~i 180 (318)
T 1vhn_A 107 LLKDLRHFRYIVRELRKSV-SGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEW-----KALSVL 180 (318)
T ss_dssp GGSCHHHHHHHHHHHHHHC-SSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEESSCTTTTTSSCCCG-----GGGGGS
T ss_pred hhhCHHHHHHHHHHHHHhh-CCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEEcCCCccccCCCCcCH-----HHHHHH
Confidence 3456666777666665432 37899996 333333333333333 888887522 22211122222 122333
Q ss_pred HHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHH-hccceEEec
Q 008112 371 RSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVR-EGADAVMLS 415 (577)
Q Consensus 371 ~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~-~G~D~imLs 415 (577)
++ +.|||....+. |. .|+..++. .|+|+||+.
T Consensus 181 ~~-~ipVi~~GgI~---------s~---~da~~~l~~~gad~V~iG 213 (318)
T 1vhn_A 181 EK-RIPTFVSGDIF---------TP---EDAKRALEESGCDGLLVA 213 (318)
T ss_dssp CC-SSCEEEESSCC---------SH---HHHHHHHHHHCCSEEEES
T ss_pred Hc-CCeEEEECCcC---------CH---HHHHHHHHcCCCCEEEEC
Confidence 33 89998755432 33 45667777 599999996
No 409
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=29.35 E-value=3.2e+02 Score=26.96 Aligned_cols=95 Identities=18% Similarity=0.165 Sum_probs=52.3
Q ss_pred HHHHHh-cCEEEEcCCCc--cCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhcc
Q 008112 334 HSIITA-SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGA 409 (577)
Q Consensus 334 deIl~~-sDGImIaRGDL--g~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~ 409 (577)
+-.++. +||+++. |=- +..+..++-..+-+..++.++ -..|||.-|. ..+-+|..+.+. |-..|+
T Consensus 28 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg---------~~~t~~ai~la~~A~~~Ga 96 (294)
T 2ehh_A 28 EFHVDNGTDAILVC-GTTGESPTLTFEEHEKVIEFAVKRAA-GRIKVIAGTG---------GNATHEAVHLTAHAKEVGA 96 (294)
T ss_dssp HHHHTTTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEECC---------CSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHCCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecC---------CCCHHHHHHHHHHHHhcCC
Confidence 334444 8999984 111 122333333333333333332 2478886543 334456555544 667799
Q ss_pred ceEEeccccCCCCCHHHHHHHHHHHHHHHh
Q 008112 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (577)
Q Consensus 410 D~imLs~ETa~G~yP~eaV~~m~~I~~~aE 439 (577)
|++|+..=--...-+.+.++....|+..+.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (294)
T 2ehh_A 97 DGALVVVPYYNKPTQRGLYEHFKTVAQEVD 126 (294)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999986432222335677888888887664
No 410
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=29.26 E-value=1.2e+02 Score=29.13 Aligned_cols=98 Identities=13% Similarity=-0.116 Sum_probs=53.9
Q ss_pred HHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEee------cChhhHhhHHHHHHh-----cCEEEEcC-
Q 008112 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKI------ESADSIPNLHSIITA-----SDGAMVAR- 347 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKI------Et~~gv~NldeIl~~-----sDGImIaR- 347 (577)
+.++.+.+.|+|+|=+..--. ++.++++.+.+.|-.+..+.-- ...++++.+...++. ++.|.+..
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~~ 112 (301)
T 3cny_A 35 QLLSDIVVAGFQGTEVGGFFP--GPEKLNYELKLRNLEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAINAPVAVVSEQ 112 (301)
T ss_dssp HHHHHHHHHTCCEECCCTTCC--CHHHHHHHHHHTTCEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHhCCCEEEecCCCC--CHHHHHHHHHHCCCeEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecCC
Confidence 456788899999997763322 7888999998876554433100 011234444444443 55665543
Q ss_pred -----CCccCCCC----------CCcHHHHHHHHHHHHHHcCCceEE
Q 008112 348 -----GDLGAELP----------IEEVPLLQEEIIRTCRSMGKAVIV 379 (577)
Q Consensus 348 -----GDLg~elg----------~e~v~~~qk~Ii~~c~~aGKPvi~ 379 (577)
|......+ ++.+....+++...|.++|..+.+
T Consensus 113 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l 159 (301)
T 3cny_A 113 TYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAY 159 (301)
T ss_dssp TTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 32211111 113344446677777777776554
No 411
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=29.24 E-value=1.9e+02 Score=32.33 Aligned_cols=131 Identities=16% Similarity=0.153 Sum_probs=66.7
Q ss_pred CCCccCHHHH--------HHHHhcCCCEEEE-------------cCCCCHHH------------HHHHHHHHH-hcCCCc
Q 008112 273 SITEKDWDDI--------KFGVDNKVDFYAV-------------SFVKDAQV------------VHELKNYLK-SCGADI 318 (577)
Q Consensus 273 ~ltekD~~dI--------~~al~~gvD~I~~-------------SfV~sa~d------------v~~lr~~l~-~~~~~i 318 (577)
.||..|++.+ +.+.+.|+|+|=+ |..+...| +.++.+.+. ..|.+.
T Consensus 138 ~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~ 217 (729)
T 1o94_A 138 EMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDC 217 (729)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCc
Confidence 5777777665 4556789999876 33332222 333333332 236788
Q ss_pred eEEEeecC-----hhhH---hhHHHHHH----hcCEEEEcCCCc---cC-CCCCCcHH-HHHHHHHHHHH-HcCCceEEE
Q 008112 319 HVIVKIES-----ADSI---PNLHSIIT----ASDGAMVARGDL---GA-ELPIEEVP-LLQEEIIRTCR-SMGKAVIVA 380 (577)
Q Consensus 319 ~IiaKIEt-----~~gv---~NldeIl~----~sDGImIaRGDL---g~-elg~e~v~-~~qk~Ii~~c~-~aGKPvi~A 380 (577)
.|..||-- ..|+ ++.-++++ .+|.+=+.-|-+ .- ..+....+ ..+-..++..+ ..++|+|..
T Consensus 218 pv~vrls~~~~~~~~G~~~~~~~~~~~~~l~~~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~ 297 (729)
T 1o94_A 218 AIATRFGVDTVYGPGQIEAEVDGQKFVEMADSLVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGV 297 (729)
T ss_dssp EEEEEEEEECSSCTTSCCTTTHHHHHHHHHGGGCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEECC
T ss_pred eEEEEEccccCcCCCCCCchHHHHHHHHHHHhhcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCCCEEEEe
Confidence 89999821 0121 12222332 268776665532 11 11110000 01223333333 358898864
Q ss_pred ehhhHhhhcCCCCChHhHHHHHHHHHhc-cceEEec
Q 008112 381 TNMLESMIVHPTPTRAEVSDIAIAVREG-ADAVMLS 415 (577)
Q Consensus 381 Tq~LeSM~~~~~PtrAEv~Dv~nav~~G-~D~imLs 415 (577)
-. .-+. .+...++..| +|+|++.
T Consensus 298 G~---------i~~~---~~a~~~l~~g~aD~V~~g 321 (729)
T 1o94_A 298 GR---------YTDP---EKMIEIVTKGYADIIGCA 321 (729)
T ss_dssp SC---------CCCH---HHHHHHHHTTSCSBEEES
T ss_pred CC---------CCCH---HHHHHHHHCCCCCEEEeC
Confidence 33 2233 2355677887 9999984
No 412
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=29.20 E-value=1.3e+02 Score=28.16 Aligned_cols=72 Identities=19% Similarity=0.104 Sum_probs=43.0
Q ss_pred ccCHHHHHHHHhcCCCEEEEcCC---CCH------HHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEE
Q 008112 276 EKDWDDIKFGVDNKVDFYAVSFV---KDA------QVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMV 345 (577)
Q Consensus 276 ekD~~dI~~al~~gvD~I~~SfV---~sa------~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImI 345 (577)
-.+.+++..+. .|+|+|.++-+ .+. -+...+++..+....++++++- =-. ..+|+.+.++. ++||-+
T Consensus 95 ~~t~~e~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviai-GGI-~~~nv~~~~~~Ga~gVav 171 (210)
T 3ceu_A 95 CHSVEEVKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMAL-GGI-NEDNLLEIKDFGFGGAVV 171 (210)
T ss_dssp ECSHHHHHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEE-SSC-CTTTHHHHHHTTCSEEEE
T ss_pred cCCHHHHHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEE-CCC-CHHHHHHHHHhCCCEEEE
Confidence 34567777777 89999987654 111 1344555544321135667662 111 14588888887 899998
Q ss_pred cCCCc
Q 008112 346 ARGDL 350 (577)
Q Consensus 346 aRGDL 350 (577)
+++=.
T Consensus 172 ~s~i~ 176 (210)
T 3ceu_A 172 LGDLW 176 (210)
T ss_dssp SHHHH
T ss_pred hHHhH
Confidence 86533
No 413
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=29.05 E-value=75 Score=32.57 Aligned_cols=64 Identities=19% Similarity=0.267 Sum_probs=38.2
Q ss_pred HHHHHHHhcCCCEEEEcCCC----------------CHHHHHHHHHHHHhcCCCceEEE--eecChhhHhhHHHHHHhcC
Q 008112 280 DDIKFGVDNKVDFYAVSFVK----------------DAQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITASD 341 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV~----------------sa~dv~~lr~~l~~~~~~i~Iia--KIEt~~gv~NldeIl~~sD 341 (577)
+.++.+.+.|+|+|.++--. +.+-+.++++.+ .+++||+ -|-|.+-++ ++++-+|
T Consensus 148 ~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~----~~iPVianGgI~s~eda~---~~l~GaD 220 (350)
T 3b0p_A 148 QSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDF----PQLTFVTNGGIRSLEEAL---FHLKRVD 220 (350)
T ss_dssp HHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHC----TTSEEEEESSCCSHHHHH---HHHTTSS
T ss_pred HHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhC----CCCeEEEECCcCCHHHHH---HHHhCCC
Confidence 33456678999999887421 122233333322 3677777 365554433 3343599
Q ss_pred EEEEcCCCc
Q 008112 342 GAMVARGDL 350 (577)
Q Consensus 342 GImIaRGDL 350 (577)
+||+||+=|
T Consensus 221 ~V~iGRa~l 229 (350)
T 3b0p_A 221 GVMLGRAVY 229 (350)
T ss_dssp EEEECHHHH
T ss_pred EEEECHHHH
Confidence 999999855
No 414
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=28.97 E-value=1.6e+02 Score=27.83 Aligned_cols=130 Identities=12% Similarity=0.131 Sum_probs=63.5
Q ss_pred cCHHHHHHHHhcCCCEEEEcC--CCCHHHHHHHHHHHHhcCCCceEEE-----eecCh--------hhHhhHHHHHHh-c
Q 008112 277 KDWDDIKFGVDNKVDFYAVSF--VKDAQVVHELKNYLKSCGADIHVIV-----KIESA--------DSIPNLHSIITA-S 340 (577)
Q Consensus 277 kD~~dI~~al~~gvD~I~~Sf--V~sa~dv~~lr~~l~~~~~~i~Iia-----KIEt~--------~gv~NldeIl~~-s 340 (577)
.+.++++.+++.|+|+|.+.- .++++.+.++ ...+..+.+-. ++++. ...+-+..+.+. +
T Consensus 83 ~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~----~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~G~ 158 (241)
T 1qo2_A 83 RSLDYAEKLRKLGYRRQIVSSKVLEDPSFLKSL----REIDVEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEYGL 158 (241)
T ss_dssp CSHHHHHHHHHTTCCEEEECHHHHHCTTHHHHH----HTTTCEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTTTC
T ss_pred CCHHHHHHHHHCCCCEEEECchHhhChHHHHHH----HHcCCcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHhCCC
Confidence 456778888889999988752 1233333333 33343222212 23332 111222233333 6
Q ss_pred CEEEEcC-CCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHh-----c-cceEE
Q 008112 341 DGAMVAR-GDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVRE-----G-ADAVM 413 (577)
Q Consensus 341 DGImIaR-GDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~-----G-~D~im 413 (577)
+.|++.. .-=+...++ .+. ..+++ ++...+|+|.... .-+..+ +..+... | +|+++
T Consensus 159 ~~i~~t~~~~~g~~~g~-~~~-~i~~l---~~~~~iPvia~GG---------I~~~~d---~~~~~~~~~~~~G~adgv~ 221 (241)
T 1qo2_A 159 EEIVHTEIEKDGTLQEH-DFS-LTKKI---AIEAEVKVLAAGG---------ISSENS---LKTAQKVHTETNGLLKGVI 221 (241)
T ss_dssp CEEEEEETTHHHHTCCC-CHH-HHHHH---HHHHTCEEEEESS---------CCSHHH---HHHHHHHHHHTTTSEEEEE
T ss_pred CEEEEEeecccccCCcC-CHH-HHHHH---HHhcCCcEEEECC---------CCCHHH---HHHHHhcccccCCeEeEEE
Confidence 7777642 100111222 222 22233 3344899987543 334444 4455545 9 99999
Q ss_pred eccccCCCCCHHHH
Q 008112 414 LSGETAHGKFPLKA 427 (577)
Q Consensus 414 Ls~ETa~G~yP~ea 427 (577)
+..---.|+++.+.
T Consensus 222 vgsal~~~~~~~~~ 235 (241)
T 1qo2_A 222 VGRAFLEGILTVEV 235 (241)
T ss_dssp ECHHHHTTSSCHHH
T ss_pred eeHHHHcCCCCHHH
Confidence 86444445665543
No 415
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=28.90 E-value=2.1e+02 Score=27.01 Aligned_cols=66 Identities=11% Similarity=0.097 Sum_probs=40.8
Q ss_pred HHHHHHHhcCCCEEEEc-----CCCCHHHHHHHHHHHHhcCCCceEEEe--ecChhhHhhHHHHHHh-cCEEEEcCCCc
Q 008112 280 DDIKFGVDNKVDFYAVS-----FVKDAQVVHELKNYLKSCGADIHVIVK--IESADSIPNLHSIITA-SDGAMVARGDL 350 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~S-----fV~sa~dv~~lr~~l~~~~~~i~IiaK--IEt~~gv~NldeIl~~-sDGImIaRGDL 350 (577)
+.++...+.|+|+|.++ +......+..+++..+. .++++++. |-+. +.+++.++. +|++++++..|
T Consensus 35 ~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~--~~iPvi~~Ggi~~~---~~~~~~~~~Gad~V~lg~~~l 108 (252)
T 1ka9_F 35 EAARAYDEAGADELVFLDISATHEERAILLDVVARVAER--VFIPLTVGGGVRSL---EDARKLLLSGADKVSVNSAAV 108 (252)
T ss_dssp HHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTT--CCSCEEEESSCCSH---HHHHHHHHHTCSEEEECHHHH
T ss_pred HHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHh--CCCCEEEECCcCCH---HHHHHHHHcCCCEEEEChHHH
Confidence 34455678899998775 23334455555554432 35677763 4332 455666655 99999997776
No 416
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=28.89 E-value=51 Score=31.89 Aligned_cols=57 Identities=16% Similarity=0.268 Sum_probs=38.6
Q ss_pred HHHHhcCCCEEEEcCCCCHHH--------HHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh----cCEEEE
Q 008112 283 KFGVDNKVDFYAVSFVKDAQV--------VHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA----SDGAMV 345 (577)
Q Consensus 283 ~~al~~gvD~I~~SfV~sa~d--------v~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~----sDGImI 345 (577)
..|.+.|+++|. |||..-+| ++++.++++..|.++.|++ .+++|..+|.++ +|.+=+
T Consensus 117 ~~Aa~AGa~yIS-PfvgRi~d~~~dG~~~v~~i~~~~~~~~~~t~ila-----AS~R~~~~v~~~a~~G~d~~Ti 185 (212)
T 3r8r_A 117 LLAARAGATYVS-PFLGRLDDIGHNGLDLISEVKQIFDIHGLDTQIIA-----ASIRHPQHVTEAALRGAHIGTM 185 (212)
T ss_dssp HHHHHHTCSEEE-EBHHHHHHTTSCHHHHHHHHHHHHHHHTCCCEEEE-----BSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHcCCeEEE-eccchhhhcCCChHHHHHHHHHHHHHcCCCCEEEE-----ecCCCHHHHHHHHHcCCCEEEc
Confidence 346778999874 89987766 5566666666677777776 566777777642 555444
No 417
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=28.72 E-value=2.3e+02 Score=26.57 Aligned_cols=100 Identities=16% Similarity=0.189 Sum_probs=54.3
Q ss_pred HHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEee-----c--ChhhHhhHHHHHHhc-CEEEEcCCCcc
Q 008112 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKI-----E--SADSIPNLHSIITAS-DGAMVARGDLG 351 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKI-----E--t~~gv~NldeIl~~s-DGImIaRGDLg 351 (577)
+.++.+.+.|++.++..- .+.++...+.++..+.. ++....-+ . +.+.++.+++.+... +. .+|=|..|
T Consensus 23 ~~l~~~~~~Gv~~~v~~~-~~~~~~~~~~~l~~~~~-~~~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~-~~~iGEiG 99 (259)
T 1zzm_A 23 ASLQRAAQAGVGKIIVPA-TEAENFARVLALAENYQ-PLYAALGLHPGMLEKHSDVSLEQLQQALERRPAK-VVAVGEIG 99 (259)
T ss_dssp HHHHHHHHTTEEEEEEEC-CSGGGHHHHHHHHHHCT-TEEEEECCCGGGGGGCCHHHHHHHHHHHHHCCSS-EEEEEEEE
T ss_pred HHHHHHHHcCCCEEEEec-CCHHHHHHHHHHHHhCC-CeEEEEEecccccccCCHHHHHHHHHHHhcCCCC-EEEEEEec
Confidence 455677889999876542 34677777777655433 33222222 1 123344454444331 22 12335555
Q ss_pred CCCCCC-cHHHHH----HHHHHHHHHcCCceEEEeh
Q 008112 352 AELPIE-EVPLLQ----EEIIRTCRSMGKAVIVATN 382 (577)
Q Consensus 352 ~elg~e-~v~~~q----k~Ii~~c~~aGKPvi~ATq 382 (577)
.+.... .-...| +..++.|.+.|+|+++-|.
T Consensus 100 ld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~~ 135 (259)
T 1zzm_A 100 LDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSR 135 (259)
T ss_dssp EECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEec
Confidence 554322 113445 4456779999999998653
No 418
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=28.61 E-value=58 Score=33.20 Aligned_cols=69 Identities=14% Similarity=0.269 Sum_probs=51.7
Q ss_pred CHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhh--HhhHHHHHHh-cCEEEEcC-------
Q 008112 278 DWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADS--IPNLHSIITA-SDGAMVAR------- 347 (577)
Q Consensus 278 D~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~g--v~NldeIl~~-sDGImIaR------- 347 (577)
..+.++.+++.|+|.|.+-.. ++++++++.+.+. .++ +||---| .+|+.++++. +|+|-+|.
T Consensus 216 tl~e~~eAl~aGaDiImLDn~-s~~~l~~av~~~~---~~v----~leaSGGIt~~~i~~~A~tGVD~IsvGalthsa~~ 287 (300)
T 3l0g_A 216 NISQVEESLSNNVDMILLDNM-SISEIKKAVDIVN---GKS----VLEVSGCVNIRNVRNIALTGVDYISIGCITNSFQN 287 (300)
T ss_dssp SHHHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHT---TSS----EEEEESSCCTTTHHHHHTTTCSEEECGGGTSSCCC
T ss_pred CHHHHHHHHHcCCCEEEECCC-CHHHHHHHHHhhc---Cce----EEEEECCCCHHHHHHHHHcCCCEEEeCccccCCCc
Confidence 468888999999999999885 6789988888774 343 4443333 4588999988 99999883
Q ss_pred CCccCCC
Q 008112 348 GDLGAEL 354 (577)
Q Consensus 348 GDLg~el 354 (577)
-||++++
T Consensus 288 lDisl~i 294 (300)
T 3l0g_A 288 KDIGLDI 294 (300)
T ss_dssp CCEEEEE
T ss_pred ceeEEEe
Confidence 4666655
No 419
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=28.58 E-value=73 Score=32.39 Aligned_cols=52 Identities=17% Similarity=0.204 Sum_probs=33.3
Q ss_pred CHHHHHHHH-HhCCcEEEEeccCC------ChHHHHHHHHHHHHHHHhcCCCeeEEEeecCCC
Q 008112 122 TREMIWKLA-EAGMNVARLNMSHG------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (577)
Q Consensus 122 ~~e~l~~li-~~Gm~v~RiN~sHg------~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~Gp 177 (577)
+.+.++.|. +.|+|++||-+..+ +++.+ +.++.+=+...+.| +-+++|+.+.
T Consensus 55 ~~~d~~~l~~~~G~N~VRip~~~~~~~~~~~~~~l-~~ld~~v~~a~~~G---i~VIld~H~~ 113 (364)
T 1g01_A 55 NENAFVALSNDWGSNMIRLAMYIGENGYATNPEVK-DLVYEGIELAFEHD---MYVIVDWHVH 113 (364)
T ss_dssp SHHHHHHHHTTSCCSEEEEEEESSSSSTTTCTTHH-HHHHHHHHHHHHTT---CEEEEEEECC
T ss_pred CHHHHHHHHHHCCCCEEEEEeeeCCCCCccCHHHH-HHHHHHHHHHHHCC---CEEEEEeccC
Confidence 578899997 89999999988742 23333 23333333334444 6788888763
No 420
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=28.49 E-value=3.6e+02 Score=27.55 Aligned_cols=114 Identities=14% Similarity=0.258 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCce---
Q 008112 302 QVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAV--- 377 (577)
Q Consensus 302 ~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPv--- 377 (577)
+.+..+...+.+....++|...+......+.+.+-+.. ..-+|+. |-++|+++=...-+++++.|++.|..|
T Consensus 60 ~~~~~~v~~aa~~~~~VPValHlDHg~~~e~i~~ai~~GFtSVMiD----gS~~p~eENi~~Tk~vv~~ah~~gvsVEaE 135 (323)
T 2isw_A 60 IYLKKLCEAALEKHPDIPICIHLDHGDTLESVKMAIDLGFSSVMID----ASHHPFDENVRITKEVVAYAHARSVSVEAE 135 (323)
T ss_dssp HHHHHHHHHHHHHCTTSCEEEEEEEECSHHHHHHHHHTTCSEEEEC----CTTSCHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEECCCCCCHHHHHHHHHcCCCeEEec----CCCCCHHHHHHHHHHHHHHHHHcCCeEEEE
Q ss_pred -----EEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCH
Q 008112 378 -----IVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFP 424 (577)
Q Consensus 378 -----i~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP 424 (577)
+.-..+ +. ....-+..|+.+.+.. -|+|++-.+-=|+.|.|+
T Consensus 136 LG~vgg~Ed~v-~~--~~~yTdPeea~~Fv~~--TgvD~LAvaiGt~HG~Yk 182 (323)
T 2isw_A 136 LGTLGGIEEDV-QN--TVQLTEPQDAKKFVEL--TGVDALAVAIGTSHGAYK 182 (323)
T ss_dssp ESCC-------------CCCCCHHHHHHHHHH--HCCSEEEECSSCCSSSBC
T ss_pred eCCccCCccCc-cc--ccccCCHHHHHHHHHH--HCCCEEEEecCccccccC
No 421
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=28.32 E-value=3.7e+02 Score=26.44 Aligned_cols=95 Identities=19% Similarity=0.184 Sum_probs=51.9
Q ss_pred HHHHHh-cCEEEEcCCCc--cCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhcc
Q 008112 334 HSIITA-SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGA 409 (577)
Q Consensus 334 deIl~~-sDGImIaRGDL--g~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~ 409 (577)
+-.++. +||+++. |=- +..+..++-..+-+..++.++ -..|||.-|. ..+-.|..+.+. |-..|+
T Consensus 28 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGvg---------~~~t~~ai~la~~a~~~Ga 96 (289)
T 2yxg_A 28 NFLIENGVSGIVAV-GTTGESPTLSHEEHKKVIEKVVDVVN-GRVQVIAGAG---------SNCTEEAIELSVFAEDVGA 96 (289)
T ss_dssp HHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEECC---------CSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeCC---------CCCHHHHHHHHHHHHhcCC
Confidence 334444 8999984 111 122233333333333333332 2478886543 334455555544 667799
Q ss_pred ceEEeccccCCCCCHHHHHHHHHHHHHHHh
Q 008112 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (577)
Q Consensus 410 D~imLs~ETa~G~yP~eaV~~m~~I~~~aE 439 (577)
|++|+..=--...-+.+.++....|+..+.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~ia~a~~ 126 (289)
T 2yxg_A 97 DAVLSITPYYNKPTQEGLRKHFGKVAESIN 126 (289)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999986432222334667788888887664
No 422
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=28.27 E-value=64 Score=32.65 Aligned_cols=62 Identities=11% Similarity=0.181 Sum_probs=46.6
Q ss_pred cCHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhh--HhhHHHHHHh-cCEEEEc
Q 008112 277 KDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADS--IPNLHSIITA-SDGAMVA 346 (577)
Q Consensus 277 kD~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~g--v~NldeIl~~-sDGImIa 346 (577)
.+.+.++.+++.|+|+|.+-.. ++++++++.+.+. .++. ||---| .+|+.++++. +|+|-+|
T Consensus 206 ~tl~ea~eAl~aGaD~I~LDn~-~~~~l~~av~~~~---~~v~----ieaSGGIt~~~i~~~a~tGVD~IsvG 270 (287)
T 3tqv_A 206 TNLDELNQAIAAKADIVMLDNF-SGEDIDIAVSIAR---GKVA----LEVSGNIDRNSIVAIAKTGVDFISVG 270 (287)
T ss_dssp SSHHHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHT---TTCE----EEEESSCCTTTHHHHHTTTCSEEECS
T ss_pred CCHHHHHHHHHcCCCEEEEcCC-CHHHHHHHHHhhc---CCce----EEEECCCCHHHHHHHHHcCCCEEEEC
Confidence 4567888899999999999874 6788888888764 3443 333333 4588999988 9999886
No 423
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=28.18 E-value=48 Score=31.88 Aligned_cols=81 Identities=9% Similarity=0.040 Sum_probs=52.3
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEE-EeecChhhHhhHHHHHHh-cCEEEEcCCCccCCCCC
Q 008112 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVI-VKIESADSIPNLHSIITA-SDGAMVARGDLGAELPI 356 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~Ii-aKIEt~~gv~NldeIl~~-sDGImIaRGDLg~elg~ 356 (577)
.+..+.+.+.|+|++.+| .+.++++..+|+.+ +. ..++ .-|-- ++- ++.+.++. +|.+++||+=+..+=|.
T Consensus 118 ~~~a~~a~~~G~~GvV~s-at~~~e~~~ir~~~---~~-f~~v~pGI~~-~g~-~~~~a~~~Gad~iVvGr~I~~a~dp~ 190 (215)
T 3ve9_A 118 PYLREVARRVNPKGFVAP-ATRPSMISRVKGDF---PD-KLVISPGVGT-QGA-KPGIALCHGADYEIVGRSVYQSADPV 190 (215)
T ss_dssp HHHHHHHHHHCCSEEECC-TTSHHHHHHHHHHC---TT-SEEEECCTTS-TTC-CTTHHHHTTCSEEEECHHHHTSSSHH
T ss_pred HHHHHHHHHcCCCceeeC-CCCHHHHHHHHHhC---CC-cEEEcCCCCc-CcC-CHHHHHHcCCCEEEeCHHHcCCCCHH
Confidence 344567788999999876 34588898888765 33 3443 34422 211 45555555 99999999988877665
Q ss_pred CcHHHHHHHH
Q 008112 357 EEVPLLQEEI 366 (577)
Q Consensus 357 e~v~~~qk~I 366 (577)
+....+++++
T Consensus 191 ~a~~~i~~~i 200 (215)
T 3ve9_A 191 RKLEEIVRSQ 200 (215)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5454444444
No 424
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=27.90 E-value=4.3e+02 Score=25.71 Aligned_cols=84 Identities=13% Similarity=0.098 Sum_probs=55.6
Q ss_pred HHHHHHHHhcCCCEEEEcCCC--CHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEcCCCccCCCCC
Q 008112 279 WDDIKFGVDNKVDFYAVSFVK--DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPI 356 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~--sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIaRGDLg~elg~ 356 (577)
.+.+...++.|+|.|.+.--. +.+++.++.+.+++ .+++++...=+++ .+..-+|++++- ||-.+-..
T Consensus 26 ~~~l~~~~~~GtDaI~vGgs~gvt~~~~~~~v~~ik~--~~~Piil~p~~~~------~~~~gaD~il~p--slln~~~~ 95 (235)
T 3w01_A 26 DDDLDAICMSQTDAIMIGGTDDVTEDNVIHLMSKIRR--YPLPLVLEISNIE------SVMPGFDFYFVP--TVLNSTDV 95 (235)
T ss_dssp HHHHHHHHTSSCSEEEECCSSCCCHHHHHHHHHHHTT--SCSCEEEECCCST------TCCTTCSEEEEE--EETTBSSG
T ss_pred HHHHHHHHHcCCCEEEECCcCCcCHHHHHHHHHHhcC--cCCCEEEecCCHH------HhhcCCCEEEEc--cccCCCCc
Confidence 456666789999999998865 78889999888876 5777777555543 345679999995 33322222
Q ss_pred CcHHHHHHHHHHHHHHcCC
Q 008112 357 EEVPLLQEEIIRTCRSMGK 375 (577)
Q Consensus 357 e~v~~~qk~Ii~~c~~aGK 375 (577)
+-+.-.|.+ .++++|.
T Consensus 96 ~~i~g~~~~---a~~~~gl 111 (235)
T 3w01_A 96 AFHNGTLLE---ALKTYGH 111 (235)
T ss_dssp GGTTHHHHH---HHHHHGG
T ss_pred chhhhHHHH---HHHHcCC
Confidence 222222333 3788886
No 425
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=27.70 E-value=40 Score=30.46 Aligned_cols=58 Identities=22% Similarity=0.359 Sum_probs=40.6
Q ss_pred EEcCCCEEEEEEec--CCC---CceEEecccccccc---ccCCCCEEEEeCCeEEEEEEEEeCCeEEE
Q 008112 189 TLTSGQEFTFTIQR--GVG---SAECVSVNYDDFVN---DVEVGDMLLVDGGMMSLLVKSKTEDSVKC 248 (577)
Q Consensus 189 ~L~~G~~v~lt~~~--~~~---~~~~i~v~~~~~~~---~v~~Gd~I~idDG~i~l~V~~v~~~~v~~ 248 (577)
..+.|++.+|+... ..| ......++-..|.. .+++|+.+.+.+ +..+|++++++.++.
T Consensus 64 gm~~Ge~~~v~ipp~~aYG~~~~~~v~~v~~~~f~~~~~~~~~G~~~~~~~--~~~~V~~v~~~~v~v 129 (151)
T 1ix5_A 64 DMEVGDEKTVKIPAEKAYGNRNEMLIQKIPRDAFKEADFEPEEGMVILAEG--IPATITEVTDNEVTL 129 (151)
T ss_dssp TCCTTCCCEEEECTTTSSCSCCSTTBCCEETHHHHTSTTCCCTTEEEESSS--CEEEEEEEETTEEEE
T ss_pred CCCCCCEEEEEECcHHHCCCCCccEEEEEEHHHcCccCCcccccCEEEECC--eEEEEEEEcCCEEEE
Confidence 36789998888763 222 22334455556654 488999999988 677899999998764
No 426
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=27.67 E-value=78 Score=33.04 Aligned_cols=52 Identities=15% Similarity=0.339 Sum_probs=32.4
Q ss_pred CHHHHHHHHHhCCcEEEEeccC-------CCh---HHHHHHHHHHHHHHHhcCCCeeEEEeecCC
Q 008112 122 TREMIWKLAEAGMNVARLNMSH-------GDH---ASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (577)
Q Consensus 122 ~~e~l~~li~~Gm~v~RiN~sH-------g~~---e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~G 176 (577)
+.+.++.|.+.|+|++||-++. |++ +...+.++.+=+..++.| +.+++|+.+
T Consensus 75 te~d~~~i~~~G~N~VRipi~~~~~~~~~~~py~~~~~l~~ld~vv~~a~~~G---i~VilDlH~ 136 (408)
T 1h4p_A 75 QEQDFANIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNS---LKVWVDLHG 136 (408)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTT---CEEEEEEEE
T ss_pred CHHHHHHHHHCCCCEEEccCCHHHcccCCCCCCccccHHHHHHHHHHHHHHCC---CEEEEECCC
Confidence 5788999999999999998752 211 112233333333334444 778888764
No 427
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=27.63 E-value=86 Score=32.92 Aligned_cols=55 Identities=13% Similarity=0.051 Sum_probs=36.7
Q ss_pred CceEEEeecChhhHhhHHHHHHh--cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEE
Q 008112 317 DIHVIVKIESADSIPNLHSIITA--SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIV 379 (577)
Q Consensus 317 ~i~IiaKIEt~~gv~NldeIl~~--sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ 379 (577)
.++|+ -=|+......+.++++. +|.|.+..+-+| .+ .--.+|...|+++|+++..
T Consensus 281 ~iPIa-~dE~~~~~~~~~~li~~~a~D~v~ik~~~~G------Gi-t~a~kia~~A~a~gi~v~~ 337 (412)
T 3stp_A 281 IVPIS-GGEHEFSVIGCAELINRKAVSVLQYDTNRVG------GI-TAAQKINAIAEAAQIPVIP 337 (412)
T ss_dssp SSCEE-ECTTCCSHHHHHHHHHTTCCSEECCCHHHHT------HH-HHHHHHHHHHHHHTCCBCC
T ss_pred CCCEE-eCCCCCCHHHHHHHHHcCCCCEEecChhhcC------CH-HHHHHHHHHHHHcCCEEEe
Confidence 45544 45777777788888864 888887432221 12 2236788999999999875
No 428
>1kzl_A Riboflavin synthase; biosynthesis of riboflavin, ligand binding, transferase; HET: CRM; 2.10A {Schizosaccharomyces pombe} SCOP: b.43.4.3 b.43.4.3
Probab=27.56 E-value=1.2e+02 Score=29.11 Aligned_cols=54 Identities=19% Similarity=0.339 Sum_probs=43.3
Q ss_pred EeccccccccccCCCCEEEEeCCeEEEEEEEEeCCeEEEEEe-------eCcEeccCceeeeC
Q 008112 210 VSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVV-------DGGELKSRRHLNVR 265 (577)
Q Consensus 210 i~v~~~~~~~~v~~Gd~I~idDG~i~l~V~~v~~~~v~~~v~-------~gG~l~s~Kginlp 265 (577)
+.+..+.+.+.++.||.|-+|. +.|+|.+++++.+.+.+. +=|.++....|||.
T Consensus 25 l~i~~~~~~~~l~~g~SIAvnG--vcLTV~~~~~~~F~vdvipETl~~T~Lg~l~~Gd~VNLE 85 (208)
T 1kzl_A 25 MKIEAPQILDDCHTGDSIAVNG--TCLTVTDFDRYHFTVGIAPESLRLTNLGQCKAGDPVNLE 85 (208)
T ss_dssp EEEECGGGCTTCCTTCEEEETT--EEEEEEEECSSEEEEEECHHHHHHSSGGGCCTTCEEEEE
T ss_pred EEEechHHhcccCCCCEEEECC--EEeeEEEEcCCEEEEEEeHHHHhhccccccCCCCEEEec
Confidence 3343345778999999999997 889999999998888774 45677778889986
No 429
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=27.49 E-value=3.9e+02 Score=25.07 Aligned_cols=100 Identities=16% Similarity=0.185 Sum_probs=53.7
Q ss_pred CceEEEeec-Ch---hh-HhhHHHHHHh-cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcC
Q 008112 317 DIHVIVKIE-SA---DS-IPNLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVH 390 (577)
Q Consensus 317 ~i~IiaKIE-t~---~g-v~NldeIl~~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~ 390 (577)
++.|..+.- ++ .+ .+.++..++. +|+|.++ |+.. ++ -+++++.|+++|..++++-.
T Consensus 80 ~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~--~~~~----~~----~~~~~~~~~~~g~~~~~~i~-------- 141 (248)
T 1geq_A 80 STPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVV--DLPV----FH----AKEFTEIAREEGIKTVFLAA-------- 141 (248)
T ss_dssp CCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEET--TCCG----GG----HHHHHHHHHHHTCEEEEEEC--------
T ss_pred CCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEEC--CCCh----hh----HHHHHHHHHHhCCCeEEEEC--------
Confidence 456776653 22 11 2344444444 9999995 5543 23 35678899999998876431
Q ss_pred CCCChHhHHHHHHHHHhccceEE--eccccCCCC---CHHHHHHHHHHHHHHH
Q 008112 391 PTPTRAEVSDIAIAVREGADAVM--LSGETAHGK---FPLKAVKVMHTVSLRT 438 (577)
Q Consensus 391 ~~PtrAEv~Dv~nav~~G~D~im--Ls~ETa~G~---yP~eaV~~m~~I~~~a 438 (577)
| -|..| ...++..++|+++ ++-.-..|. ++....+.+.++....
T Consensus 142 ~-~t~~e---~~~~~~~~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~ 190 (248)
T 1geq_A 142 P-NTPDE---RLKVIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRIC 190 (248)
T ss_dssp T-TCCHH---HHHHHHHHCSSEEEEECCC-------CCCHHHHHHHHHHHHHC
T ss_pred C-CCHHH---HHHHHHhcCCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhc
Confidence 1 13333 3455556677333 221101122 5566677777776544
No 430
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=27.48 E-value=3.4e+02 Score=26.92 Aligned_cols=95 Identities=20% Similarity=0.212 Sum_probs=51.8
Q ss_pred HHHHHh-cCEEEEcCCCc--cCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhcc
Q 008112 334 HSIITA-SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGA 409 (577)
Q Consensus 334 deIl~~-sDGImIaRGDL--g~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~ 409 (577)
+-.++. +||+++. |=- +..+..++-..+-+..++.++ -..|||.-|. ..+-+|..+.+. |-..|+
T Consensus 40 ~~li~~Gv~gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpViaGvg---------~~~t~~ai~la~~A~~~Ga 108 (301)
T 1xky_A 40 NYLIDNGTTAIVVG-GTTGESPTLTSEEKVALYRHVVSVVD-KRVPVIAGTG---------SNNTHASIDLTKKATEVGV 108 (301)
T ss_dssp HHHHHTTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC---------CSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCceEEeCCC---------CCCHHHHHHHHHHHHhcCC
Confidence 334444 8999984 111 122333333333333333332 2478886543 334455555544 667799
Q ss_pred ceEEeccccCCCCCHHHHHHHHHHHHHHHh
Q 008112 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (577)
Q Consensus 410 D~imLs~ETa~G~yP~eaV~~m~~I~~~aE 439 (577)
|++|+..=--...-+.+.++....|+..+.
T Consensus 109 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 138 (301)
T 1xky_A 109 DAVMLVAPYYNKPSQEGMYQHFKAIAESTP 138 (301)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHTCS
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999986433223335667778888876654
No 431
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=27.46 E-value=4.3e+02 Score=26.39 Aligned_cols=89 Identities=9% Similarity=0.163 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEe
Q 008112 302 QVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVAT 381 (577)
Q Consensus 302 ~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~AT 381 (577)
+.++.++++..+. .+.+++-+-.+..++-+.+ .+|.+-||-+++. ..+ +++.+.+.||||++.|
T Consensus 76 ~gl~~l~~~~~~~--Glp~~te~~d~~~~~~l~~---~vd~~kIgA~~~~------n~~-----Ll~~~a~~~kPV~lk~ 139 (292)
T 1o60_A 76 EGLKIFQELKDTF--GVKIITDVHEIYQCQPVAD---VVDIIQLPAFLAR------QTD-----LVEAMAKTGAVINVKK 139 (292)
T ss_dssp HHHHHHHHHHHHH--CCEEEEECCSGGGHHHHHT---TCSEEEECGGGTT------CHH-----HHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHc--CCcEEEecCCHHHHHHHHh---cCCEEEECccccc------CHH-----HHHHHHcCCCcEEEeC
Confidence 3455666666543 5778888777777666654 5899999966552 233 5555668899999977
Q ss_pred hhhHhhhcCCCCChHhHHHHHHHHH-hccceEEe
Q 008112 382 NMLESMIVHPTPTRAEVSDIAIAVR-EGADAVML 414 (577)
Q Consensus 382 q~LeSM~~~~~PtrAEv~Dv~nav~-~G~D~imL 414 (577)
.|. -|..|+...+..+. .|.+-++|
T Consensus 140 G~~--------~t~~ei~~Av~~i~~~Gn~~i~L 165 (292)
T 1o60_A 140 PQF--------LSPSQMGNIVEKIEECGNDKIIL 165 (292)
T ss_dssp CTT--------SCGGGHHHHHHHHHHTTCCCEEE
T ss_pred CCC--------CCHHHHHHHHHHHHHcCCCeEEE
Confidence 653 25567777777665 57644444
No 432
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=27.45 E-value=76 Score=33.95 Aligned_cols=97 Identities=11% Similarity=0.049 Sum_probs=53.0
Q ss_pred CCccCHHHH-HHHHhcCCCEEEEcCCCCH---------------------HHHHHHHHHHHhcCCCceEEE--eecChhh
Q 008112 274 ITEKDWDDI-KFGVDNKVDFYAVSFVKDA---------------------QVVHELKNYLKSCGADIHVIV--KIESADS 329 (577)
Q Consensus 274 ltekD~~dI-~~al~~gvD~I~~SfV~sa---------------------~dv~~lr~~l~~~~~~i~Iia--KIEt~~g 329 (577)
+++.|..++ +.+.+.|+|+|.++.-... ..++.+++.-+..+.+++||+ -|.|.+-
T Consensus 308 ~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~D 387 (443)
T 1tv5_A 308 LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLD 387 (443)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHH
Confidence 455554444 4567899999998864210 012333333333345788888 5666543
Q ss_pred HhhHHHHHHh-cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCC
Q 008112 330 IPNLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGK 375 (577)
Q Consensus 330 v~NldeIl~~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGK 375 (577)
..+.+.. +|+|+++|+=+-- ++.-+..+.+.+-....+.|.
T Consensus 388 ---A~e~l~aGAd~Vqigrall~~--gP~l~~~i~~~l~~~l~~~G~ 429 (443)
T 1tv5_A 388 ---ALEKIEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGY 429 (443)
T ss_dssp ---HHHHHHTTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHHTC
T ss_pred ---HHHHHHcCCCEEEEcHHHHhc--ChHHHHHHHHHHHHHHHHhCC
Confidence 2233334 9999999985521 222333444444444555554
No 433
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=27.43 E-value=63 Score=33.91 Aligned_cols=51 Identities=14% Similarity=0.292 Sum_probs=32.9
Q ss_pred CCHHHHHHHHHhCCcEEEEeccC-------CCh---HHHHHHHHHHHHHHHhcCCCeeEEEeecC
Q 008112 121 NTREMIWKLAEAGMNVARLNMSH-------GDH---ASHQKVIDLVKEYNAQSKDNVIAIMLDTK 175 (577)
Q Consensus 121 ~~~e~l~~li~~Gm~v~RiN~sH-------g~~---e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~ 175 (577)
-+.+.++.|.++|+|++||-+++ +.+ ..+ +.++.+=+...+.| +.+++||-
T Consensus 74 ite~D~~~ik~~G~N~VRipi~~~~~~~~~~~py~~~~~-~~ld~vV~~a~~~G---l~VILDlH 134 (399)
T 3n9k_A 74 ITEQDFKQISNLGLNFVRIPIGYWAFQLLDNDPYVQGQV-QYLEKALGWARKNN---IRVWIDLH 134 (399)
T ss_dssp SCHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCCHH-HHHHHHHHHHHHTT---CEEEEEEE
T ss_pred CcHHHHHHHHHcCCCEEEEcccHHHccCCCCCccchhHH-HHHHHHHHHHHHCC---CEEEEEec
Confidence 36789999999999999999862 221 122 33333333334444 88999974
No 434
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=27.38 E-value=3.5e+02 Score=33.52 Aligned_cols=118 Identities=15% Similarity=0.090 Sum_probs=70.7
Q ss_pred HHhcCCCEEEEcC---CCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhH-HHHHHh-cCEEEEcCCCccC-------
Q 008112 285 GVDNKVDFYAVSF---VKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNL-HSIITA-SDGAMVARGDLGA------- 352 (577)
Q Consensus 285 al~~gvD~I~~Sf---V~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~Nl-deIl~~-sDGImIaRGDLg~------- 352 (577)
.+..|++.+.-+- ..+.+|+.++.+.+++.+...+|+.|+=.-.++... ..+.++ +|+|.|.-.+=|.
T Consensus 993 ~~~~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~kAGAD~IvVsG~eGGTgasp~~~ 1072 (1520)
T 1ofd_A 993 RSKPGVTLISPPPHHDIYSIEDLAQLIYDLHQINPEAQVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGGTGASPLSS 1072 (1520)
T ss_dssp TSCTTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTSEEEEEEECSTTHHHHHHHHHHTTCSEEEEECTTCCCSSEEHHH
T ss_pred CCCCCCCeeCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEecCCCChHHHHHHHHHcCCCEEEEeCCCCccCCCcchh
Confidence 3455666554321 356777777777777777778899996432232222 233333 9999994222110
Q ss_pred --CCCCCcHHHHHHHHHHHHHHc----CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 353 --ELPIEEVPLLQEEIIRTCRSM----GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 353 --elg~e~v~~~qk~Ii~~c~~a----GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
+.+. .......++...+.+. .+|+|.+-.+- --.|++.|+..|||++.+.
T Consensus 1073 ~~~~Gl-Pt~~aL~ev~~al~~~glr~~IpVIAdGGIr------------tG~DVakALaLGAdaV~iG 1128 (1520)
T 1ofd_A 1073 IKHAGS-PWELGVTEVHRVLMENQLRDRVLLRADGGLK------------TGWDVVMAALMGAEEYGFG 1128 (1520)
T ss_dssp HHHBCC-CHHHHHHHHHHHHHHTTCGGGCEEEEESSCC------------SHHHHHHHHHTTCSEEECS
T ss_pred hcCCch-hHHHHHHHHHHHHHhcCCCCCceEEEECCCC------------CHHHHHHHHHcCCCeeEEc
Confidence 1111 1233444455555544 48888876654 3478999999999999874
No 435
>1z85_A Hypothetical protein TM1380; alpha/beta knot fold, structural genomics, joint center for structural genomics, JCSG; 2.12A {Thermotoga maritima}
Probab=27.37 E-value=97 Score=30.18 Aligned_cols=71 Identities=20% Similarity=0.197 Sum_probs=42.4
Q ss_pred ccCCCCEEEEeCC---eEEEEEEEEeCCeEEEEEeeCcEeccCc--eeeeCCCCCCCCCCCccCHHHHHHHHhcCCCEEE
Q 008112 220 DVEVGDMLLVDGG---MMSLLVKSKTEDSVKCEVVDGGELKSRR--HLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYA 294 (577)
Q Consensus 220 ~v~~Gd~I~idDG---~i~l~V~~v~~~~v~~~v~~gG~l~s~K--ginlp~~~~~lp~ltekD~~dI~~al~~gvD~I~ 294 (577)
.+++||.|.+-|| ....+|.+++++.+.+++...-...... .+.+ ...+|. .++-...|+.+.+.|++-|.
T Consensus 40 Rl~~Gd~v~l~dg~G~~~~a~I~~~~~~~~~~~i~~~~~~~~e~~~~i~L---~~al~K-~~r~e~ilqkatELGV~~I~ 115 (234)
T 1z85_A 40 RLKEGDVIEATDGNGFSYTCILKSLKKKTAAAKIVKVEEKEKEPTEKLSV---VVPIGR-WERTRFLIEKCVELGVDEIF 115 (234)
T ss_dssp TCCTTCEEEEECSBSEEEEEEEEEECSSCEEEEEEEEEECCCCCSSCEEE---EEECCC-HHHHHHHHHHHHHTTCSEEE
T ss_pred cCCCCCEEEEEeCCCCEEEEEEEEecCCEEEEEEEEEeccCCCCCceEEE---EEeccc-hHHHHHHHHHHHHhCCCEEE
Confidence 4588999998664 5667888899998887776432211111 1111 012222 23334456788899999764
No 436
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=27.20 E-value=81 Score=30.85 Aligned_cols=46 Identities=24% Similarity=0.403 Sum_probs=29.9
Q ss_pred HHHHHHHHhCCcEEEEeccCC------ChHHHHHHHHHHHHHHHhcCCCeeEEEeecCC
Q 008112 124 EMIWKLAEAGMNVARLNMSHG------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (577)
Q Consensus 124 e~l~~li~~Gm~v~RiN~sHg------~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~G 176 (577)
+.++.|-+.|+|++|+-++.+ ..+.+.++++. ..+.| +.+++|+.+
T Consensus 36 ~~~~~lk~~G~N~VRi~~~~~~~w~~~~~~~ld~~v~~----a~~~G---i~Vild~h~ 87 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVLSNGVRWSKNGPSDVANVISL----CKQNR---LICMLEVHD 87 (302)
T ss_dssp THHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHH----HHHTT---CEEEEEEGG
T ss_pred HHHHHHHHcCCCEEEEEccCCcccCCCCHHHHHHHHHH----HHHCC---CEEEEEecc
Confidence 678889999999999988643 12233333332 23444 678888754
No 437
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=27.19 E-value=3.4e+02 Score=26.52 Aligned_cols=128 Identities=14% Similarity=0.169 Sum_probs=72.2
Q ss_pred HHHHHHhcCCCEEEEcCCC-CHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh--cCEEEEcCCCccC-CCCC
Q 008112 281 DIKFGVDNKVDFYAVSFVK-DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGAMVARGDLGA-ELPI 356 (577)
Q Consensus 281 dI~~al~~gvD~I~~SfV~-sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~--sDGImIaRGDLg~-elg~ 356 (577)
.+..+...|+|.|.+-... +.+++.++.++..+.| +.+++-+-|. +.++..++. .|.|-|-.-||.. +..+
T Consensus 115 qi~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lG--l~~lvEv~~~---eE~~~A~~l~g~~iIGinnr~l~t~~~d~ 189 (251)
T 1i4n_A 115 QVKLASSVGADAILIIARILTAEQIKEIYEAAEELG--MDSLVEVHSR---EDLEKVFSVIRPKIIGINTRDLDTFEIKK 189 (251)
T ss_dssp HHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTT--CEEEEEECSH---HHHHHHHTTCCCSEEEEECBCTTTCCBCT
T ss_pred HHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHcC--CeEEEEeCCH---HHHHHHHhcCCCCEEEEeCcccccCCCCH
Confidence 3555888999998765543 6678888888777653 3444444333 334444444 6777777666632 2222
Q ss_pred CcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCC-CCCHHHHHHHHH
Q 008112 357 EEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAH-GKFPLKAVKVMH 432 (577)
Q Consensus 357 e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~-G~yP~eaV~~m~ 432 (577)
+....+.+.+ ..+++++. .+..-|.++ +..+... +|+++.. |.-+ -..|.++++-|.
T Consensus 190 ~~~~~l~~~i-----p~~~~vIa---------EsGI~t~ed---v~~~~~~-a~avLVG-~aimr~~d~~~~~~~l~ 247 (251)
T 1i4n_A 190 NVLWELLPLV-----PDDTVVVA---------ESGIKDPRE---LKDLRGK-VNAVLVG-TSIMKAENPRRFLEEMR 247 (251)
T ss_dssp THHHHHGGGS-----CTTSEEEE---------ESCCCCGGG---HHHHTTT-CSEEEEC-HHHHHCSSHHHHHHHHH
T ss_pred HHHHHHHHhC-----CCCCEEEE---------eCCCCCHHH---HHHHHHh-CCEEEEc-HHHcCCcCHHHHHHHHH
Confidence 2222221111 12445553 234445544 6677777 9999884 4333 466777776653
No 438
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=27.06 E-value=5e+02 Score=26.16 Aligned_cols=72 Identities=18% Similarity=0.273 Sum_probs=46.9
Q ss_pred HHHHHh-cCEEEEcCC-----CccCCCCC--CcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcC-CCCChHhHHHHHHH
Q 008112 334 HSIITA-SDGAMVARG-----DLGAELPI--EEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVH-PTPTRAEVSDIAIA 404 (577)
Q Consensus 334 deIl~~-sDGImIaRG-----DLg~elg~--e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~-~~PtrAEv~Dv~na 404 (577)
..++++ .|.|.+-+| ..|...+. ++-+...+++.+++++..+-+++-. .. |.-+ -.|++.+
T Consensus 177 ~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc-------~gGpIst---peDv~~~ 246 (286)
T 2p10_A 177 VAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILS-------HGGPIAN---PEDARFI 246 (286)
T ss_dssp HHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEE-------ESTTCCS---HHHHHHH
T ss_pred HHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEe-------cCCCCCC---HHHHHHH
Confidence 344444 888888776 44555443 3557788999999999988777632 33 4434 3678888
Q ss_pred HHh--ccceEEec
Q 008112 405 VRE--GADAVMLS 415 (577)
Q Consensus 405 v~~--G~D~imLs 415 (577)
+.. |+|++...
T Consensus 247 l~~t~G~~G~~gA 259 (286)
T 2p10_A 247 LDSCQGCHGFYGA 259 (286)
T ss_dssp HHHCTTCCEEEES
T ss_pred HhcCCCccEEEee
Confidence 888 99999984
No 439
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=27.01 E-value=97 Score=30.30 Aligned_cols=51 Identities=14% Similarity=0.288 Sum_probs=32.0
Q ss_pred CHHHHHHHHHhCCcEEEEeccCC---------C--hHHHHHHHHHHHHHHHhcCCCeeEEEeecCC
Q 008112 122 TREMIWKLAEAGMNVARLNMSHG---------D--HASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (577)
Q Consensus 122 ~~e~l~~li~~Gm~v~RiN~sHg---------~--~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~G 176 (577)
+.+.++.|.+.|+|++|+-++.. . .+.+..+-+.|.. ..+.| +.+++|+..
T Consensus 35 ~~~d~~~l~~~G~n~vR~~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~-a~~~G---i~vild~h~ 96 (317)
T 3aof_A 35 KDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVING-ALKRG---LAVVINIHH 96 (317)
T ss_dssp CTHHHHHHHHHTCSEEEECCCGGGGBCSSTTCCBCHHHHHHHHHHHHH-HHHTT---CEEEEECCC
T ss_pred CHHHHHHHHHcCCCEEEEeccHHHhcCCCCCCcCCHHHHHHHHHHHHH-HHHCC---CEEEEEecC
Confidence 57889999999999999976521 1 2223333333333 33444 678888864
No 440
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=27.00 E-value=2.8e+02 Score=26.13 Aligned_cols=121 Identities=12% Similarity=0.024 Sum_probs=67.1
Q ss_pred HHHHHHHhcCCCEEEEcCCCC----HHHHHHHHHHHHhcCCCceEEEe------ecC------hhhHhhHHHHHHh----
Q 008112 280 DDIKFGVDNKVDFYAVSFVKD----AQVVHELKNYLKSCGADIHVIVK------IES------ADSIPNLHSIITA---- 339 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV~s----a~dv~~lr~~l~~~~~~i~IiaK------IEt------~~gv~NldeIl~~---- 339 (577)
+.++.+.+.|+|+|=+..-.. .+++.++++.+++.|-.+..+.- +-+ .++++.+...++.
T Consensus 21 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~l 100 (290)
T 2qul_A 21 ATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCCIGLKSEYDFASPDKSVRDAGTEYVKRLLDDCHLL 100 (290)
T ss_dssp HHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEEEEECGGGCTTCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 456788889999998875432 26889999999887765544331 111 1234445555443
Q ss_pred -cCEEEEc----CCC--ccCCCC----CCcHHHHHHHHHHHHHHcCCceEEEehhhHhhh---cCCCCChHhHHHHHHHH
Q 008112 340 -SDGAMVA----RGD--LGAELP----IEEVPLLQEEIIRTCRSMGKAVIVATNMLESMI---VHPTPTRAEVSDIAIAV 405 (577)
Q Consensus 340 -sDGImIa----RGD--Lg~elg----~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~---~~~~PtrAEv~Dv~nav 405 (577)
++.+.+. .|. +.-... ++.+....+++...|+++|..+.+ |.+- .+...|.+++.++...+
T Consensus 101 G~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l-----En~~~~~~~~~~~~~~~~~l~~~~ 175 (290)
T 2qul_A 101 GAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYAL-----EVVNRFEQWLCNDAKEAIAFADAV 175 (290)
T ss_dssp TCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEE-----ECCCTTTCSSCCSHHHHHHHHHHH
T ss_pred CCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEE-----EeCccccccccCCHHHHHHHHHHc
Confidence 4455431 122 111111 113444445667777788876654 3332 23345667766666554
No 441
>3oru_A DUF1989 family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, metal binding PR; HET: MSE; 1.11A {Ruegeria SP} PDB: 3siy_A*
Probab=26.99 E-value=91 Score=30.63 Aligned_cols=55 Identities=15% Similarity=0.173 Sum_probs=37.0
Q ss_pred cEEEcCCCEEEEEEecCCCCceEEecccccccc--------------ccCCCCEEEEeCCeEEEEEEEE
Q 008112 187 PITLTSGQEFTFTIQRGVGSAECVSVNYDDFVN--------------DVEVGDMLLVDGGMMSLLVKSK 241 (577)
Q Consensus 187 ~i~L~~G~~v~lt~~~~~~~~~~i~v~~~~~~~--------------~v~~Gd~I~idDG~i~l~V~~v 241 (577)
...|++||.++|+--++...-..+..|..+.-+ .+.+|+.+|=|.|+..++|++=
T Consensus 46 s~~v~~Gq~lRI~d~eG~Q~~D~l~~na~d~~Er~s~~~T~~~q~~~~lt~G~~L~S~~gRpl~tIv~D 114 (234)
T 3oru_A 46 AIRMAQGEALMVINRDGSQIGDFWAFVEGDCGEYLSMEHLRPTLRRVSPRPGDVLVSNRRRPILTLLED 114 (234)
T ss_dssp EEEECTTCEEEEECSSSSCCEEEEEEETTEEEEEBCHHHHHHHHTSSSCCTTCEEEBTTSSEEEEEEEE
T ss_pred EEEECCCCEEEEEeCCCCeEEEEEEecCCCCccccCHHHHHHHhccccCCCCCEeEeCCCCeeEEEEcc
Confidence 478999999999854332222333333332221 3678999999999999998864
No 442
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=26.82 E-value=78 Score=31.26 Aligned_cols=53 Identities=21% Similarity=0.154 Sum_probs=34.2
Q ss_pred CCCHHHHHHHH-HhCCcEEEEeccCC------ChHHHHHHHHHHHHHHHhcCCCeeEEEeecCC
Q 008112 120 TNTREMIWKLA-EAGMNVARLNMSHG------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (577)
Q Consensus 120 ~~~~e~l~~li-~~Gm~v~RiN~sHg------~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~G 176 (577)
..+.+.++.|. +.|+|++|+-+... +++ +.+.++.+=+...+.| +-+++|+.+
T Consensus 43 ~~~~~~~~~l~~~~G~N~VRip~~~~~~~~~~~~~-~~~~ld~~v~~a~~~G---i~Vild~H~ 102 (303)
T 7a3h_A 43 FVNYESMKWLRDDWGINVFRAAMYTSSGGYIDDPS-VKEKVKEAVEAAIDLD---IYVIIDWHI 102 (303)
T ss_dssp GCSHHHHHHHHHHTCCCEEEEEEESSTTSTTTCTT-HHHHHHHHHHHHHHHT---CEEEEEEEC
T ss_pred cCCHHHHHHHHHhcCCCEEEEEEEeCCCCccCCHH-HHHHHHHHHHHHHHCC---CEEEEEecc
Confidence 34678899998 67999999988642 222 3334444334444555 667888765
No 443
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=26.81 E-value=4.5e+02 Score=25.87 Aligned_cols=96 Identities=21% Similarity=0.226 Sum_probs=53.6
Q ss_pred HHHHHh-cCEEEEcCCCc--cCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhcc
Q 008112 334 HSIITA-SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGA 409 (577)
Q Consensus 334 deIl~~-sDGImIaRGDL--g~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~ 409 (577)
+-.++. +||+++. |=- +..+..++-..+.+..++.++ -..|||.-+. ..+-.|..+.+. |-..|+
T Consensus 30 ~~li~~Gv~gl~v~-GttGE~~~Lt~~Er~~v~~~~~~~~~-grvpviaGvg---------~~~t~~ai~la~~a~~~Ga 98 (292)
T 3daq_A 30 NFLLENNAQAIIVN-GTTAESPTLTTDEKELILKTVIDLVD-KRVPVIAGTG---------TNDTEKSIQASIQAKALGA 98 (292)
T ss_dssp HHHHHTTCCEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC---------CSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-ccccccccCCHHHHHHHHHHHHHHhC-CCCcEEEeCC---------cccHHHHHHHHHHHHHcCC
Confidence 344444 8999985 111 112222333333333333332 2468887543 334455555444 666799
Q ss_pred ceEEeccccCCCCCHHHHHHHHHHHHHHHhc
Q 008112 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRTEA 440 (577)
Q Consensus 410 D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~ 440 (577)
|++|+..=--...-+-+.++..+.|+..+.-
T Consensus 99 davlv~~P~y~~~~~~~l~~~f~~ia~a~~l 129 (292)
T 3daq_A 99 DAIMLITPYYNKTNQRGLVKHFEAIADAVKL 129 (292)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHHCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 9999964332333356788899999888853
No 444
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=26.80 E-value=3.2e+02 Score=26.78 Aligned_cols=119 Identities=18% Similarity=0.068 Sum_probs=70.6
Q ss_pred HHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhccccC
Q 008112 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (577)
Q Consensus 365 ~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~~ 444 (577)
-+...|+..|.++++-. |.......+...-..|++.+...++ +.| .++++...++..+-. .++
T Consensus 79 a~A~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~---~~~-~~~~~~a~~~~~~~~-~~~- 141 (303)
T 1o58_A 79 AIAMIGAKRGHRVILTM-----------PETMSVERRKVLKMLGAELVLTPGE---LGM-KGAVEKALEISRETG-AHM- 141 (303)
T ss_dssp HHHHHHHHHTCCEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGG---GHH-HHHHHHHHHHHHHHC-CBC-
T ss_pred HHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECCC---CCH-HHHHHHHHHHHHhcC-eEe-
Confidence 46677889999987642 2212223455666789998776432 113 366666666554432 111
Q ss_pred CCCCCCCCcccCCChhHH---HHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHhh----CCC-CeEEEEcCcHH
Q 008112 445 GAMPPNLGQAFKNHMSEM---FAYHATMMSNTLG--T-SIVVFTRTGFMAILLSHY----RPS-GTIFAFTNEKR 508 (577)
Q Consensus 445 ~~~~~~l~~~~~~~~~~~---ia~~a~~~a~~~~--a-aIiV~T~sG~tA~~is~~----RP~-~PIIAvT~~~~ 508 (577)
...|. ++... ...-+.++.++++ . .||+.+-+|.++--++++ .|. ..||++.+...
T Consensus 142 ~~~~~--------n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~~vigve~~~~ 208 (303)
T 1o58_A 142 LNQFE--------NPYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKS 208 (303)
T ss_dssp CCTTT--------CHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEEEETTS
T ss_pred CCCCC--------CHHHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCcccHHHHHHHHHHhCCCCCEEEEEecCCC
Confidence 11111 11111 1223467777764 4 899999999988766654 588 99999998654
No 445
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A*
Probab=26.70 E-value=1.3e+02 Score=31.73 Aligned_cols=53 Identities=28% Similarity=0.325 Sum_probs=33.3
Q ss_pred CCCHHHH-HHHHHhCCcEEEEeccCC---------ChHHHHHHHHHHHHHHHhcCCCeeEEEeecCC
Q 008112 120 TNTREMI-WKLAEAGMNVARLNMSHG---------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (577)
Q Consensus 120 ~~~~e~l-~~li~~Gm~v~RiN~sHg---------~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~G 176 (577)
....+.+ +.|.+.|+|++|+-++.. +.+.+..+.+.|+.+ ++.| +.+++|+-+
T Consensus 65 ~~~~~di~~~l~~~G~N~VRl~v~w~~~~p~~g~~~~~~l~~l~~~v~~a-~~~G---i~vildlH~ 127 (481)
T 2osx_A 65 QFTEADLAREYADMGTNFVRFLISWRSVEPAPGVYDQQYLDRVEDRVGWY-AERG---YKVMLDMHQ 127 (481)
T ss_dssp SCCHHHHHHHHHHHCCCEEEEEECHHHHCSBTTBCCHHHHHHHHHHHHHH-HHTT---CEEEEEECC
T ss_pred cccHHHHHHHHHHCCCCEEEEeCcHHHcCCCCCCcCHHHHHHHHHHHHHH-HHCC---CEEEEEccc
Confidence 3467888 899999999999987621 123333333334333 3444 778888643
No 446
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=26.68 E-value=78 Score=30.16 Aligned_cols=49 Identities=18% Similarity=0.191 Sum_probs=30.8
Q ss_pred HHHHHHHHHhCCcEEEEecc-CCC----------------hHHHHHHHHHHHHHHHhcCCCeeEEEeec
Q 008112 123 REMIWKLAEAGMNVARLNMS-HGD----------------HASHQKVIDLVKEYNAQSKDNVIAIMLDT 174 (577)
Q Consensus 123 ~e~l~~li~~Gm~v~RiN~s-Hg~----------------~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl 174 (577)
.+.|+.|.+.|+|+.|+=++ ++. .+.|.+.++.+=++..+.| +-+++|+
T Consensus 45 ~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~G---i~vil~~ 110 (351)
T 3vup_A 45 EPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYN---ILVFPCL 110 (351)
T ss_dssp HHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTT---CEEEEEE
T ss_pred HHHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCC---CeEEEEe
Confidence 34588899999999998432 111 1245555555555556666 5667775
No 447
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=26.67 E-value=4.4e+02 Score=26.17 Aligned_cols=95 Identities=15% Similarity=0.128 Sum_probs=52.1
Q ss_pred HHHHHh-cCEEEEcCCCc--cCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhcc
Q 008112 334 HSIITA-SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGA 409 (577)
Q Consensus 334 deIl~~-sDGImIaRGDL--g~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~ 409 (577)
+-.++. +||+++. |=- +..+..++-..+-+..++.++ -..|||.-+. ..+-+|..+.+. |-..|+
T Consensus 44 ~~li~~Gv~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg---------~~st~~ai~la~~A~~~Ga 112 (304)
T 3cpr_A 44 AYLVDKGLDSLVLA-GTTGESPTTTAAEKLELLKAVREEVG-DRAKLIAGVG---------TNNTRTSVELAEAAASAGA 112 (304)
T ss_dssp HHHHHTTCCEEEES-STTTTTTTSCHHHHHHHHHHHHHHHT-TTSEEEEECC---------CSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEecCC---------CCCHHHHHHHHHHHHhcCC
Confidence 334444 8999985 111 122333333333333333332 2478886543 334456555554 667799
Q ss_pred ceEEeccccCCCCCHHHHHHHHHHHHHHHh
Q 008112 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (577)
Q Consensus 410 D~imLs~ETa~G~yP~eaV~~m~~I~~~aE 439 (577)
|++|+..=--...-+.+.++....|+..+.
T Consensus 113 davlv~~P~y~~~~~~~l~~~f~~ia~a~~ 142 (304)
T 3cpr_A 113 DGLLVVTPYYSKPSQEGLLAHFGAIAAATE 142 (304)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999986432222235667788888887664
No 448
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=26.66 E-value=1.7e+02 Score=30.37 Aligned_cols=64 Identities=11% Similarity=0.139 Sum_probs=41.7
Q ss_pred CCcEEEEec-CCCCCCHHHH-----HHHHHhCCcEEEEeccCC------ChHHHHHHHHHHHHHHHhcCCCeeEEEeecC
Q 008112 108 RKTKIVCTI-GPSTNTREMI-----WKLAEAGMNVARLNMSHG------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTK 175 (577)
Q Consensus 108 r~tKIi~Ti-GPs~~~~e~l-----~~li~~Gm~v~RiN~sHg------~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~ 175 (577)
.+...-+|+ |.-..++|.+ +++++.|.+.+.+++... +.++-.+.++.+|++ ++ ..+.|++|..
T Consensus 124 ~~v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a---~g-~~~~l~vDaN 199 (393)
T 4dwd_A 124 TRLPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVREL---LG-PDAVIGFDAN 199 (393)
T ss_dssp SEEEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHH---HC-TTCCEEEECT
T ss_pred CceeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHH---hC-CCCeEEEECC
Confidence 356677887 3434455554 566788999999999654 566666667766654 44 3455666643
No 449
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=26.51 E-value=3.3e+02 Score=27.18 Aligned_cols=156 Identities=12% Similarity=0.094 Sum_probs=77.0
Q ss_pred HHHHh-cCEEEEcCCCc--cCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHH-HHHHhccc
Q 008112 335 SIITA-SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIA-IAVREGAD 410 (577)
Q Consensus 335 eIl~~-sDGImIaRGDL--g~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~-nav~~G~D 410 (577)
-.++. +||+++. |=- +..+..++-..+-+..++.+ -..|||.-|. ..+-+|..+.+ .|-..|+|
T Consensus 37 ~li~~Gv~Gl~v~-GtTGE~~~Lt~~Er~~v~~~~v~~~--grvpViaGvg---------~~~t~~ai~la~~A~~~Gad 104 (313)
T 3dz1_A 37 FYAEVGCEGVTVL-GILGEAPKLDAAEAEAVATRFIKRA--KSMQVIVGVS---------APGFAAMRRLARLSMDAGAA 104 (313)
T ss_dssp HHHHTTCSEEEES-TGGGTGGGSCHHHHHHHHHHHHHHC--TTSEEEEECC---------CSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHCCCCEEEeC-ccCcChhhCCHHHHHHHHHHHHHHc--CCCcEEEecC---------CCCHHHHHHHHHHHHHcCCC
Confidence 33343 8999984 211 12233333333333333333 3578887543 33445555555 46677999
Q ss_pred eEEeccccCCCCCHHHHHHHHHHHHHHHhccccCCCCCCCCCcccCCChhHHHHHHHHHHHhhcCceE-EEEcCCh---H
Q 008112 411 AVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSI-VVFTRTG---F 486 (577)
Q Consensus 411 ~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~l~~~~~~~~~~~ia~~a~~~a~~~~aaI-iV~T~sG---~ 486 (577)
++|+..=-. -.-+.+.++....|+..+...++.- +|+.-......-..+.+ .+++.++..-+ |=.|.+| +
T Consensus 105 avlv~~P~~-~~s~~~l~~~f~~va~a~~~~lPii-lYn~P~~tg~~l~~~~~----~~La~~~pnIvgiKd~~~~~~~~ 178 (313)
T 3dz1_A 105 GVMIAPPPS-LRTDEQITTYFRQATEAIGDDVPWV-LQDYPLTLSVVMTPKVI----RQIVMDSASCVMLKHEDWPGLEK 178 (313)
T ss_dssp EEEECCCTT-CCSHHHHHHHHHHHHHHHCTTSCEE-EEECHHHHCCCCCHHHH----HHHHHHCSSEEEEEECCSSCHHH
T ss_pred EEEECCCCC-CCCHHHHHHHHHHHHHhCCCCCcEE-EEeCccccCcCCCHHHH----HHHHHhCCCEEEEEcCCCCCHHH
Confidence 999953321 1224677888899988886111100 11100000001113333 34565544322 2245454 3
Q ss_pred HHHHHHhhC----CCCeEEEEcCcHH
Q 008112 487 MAILLSHYR----PSGTIFAFTNEKR 508 (577)
Q Consensus 487 tA~~is~~R----P~~PIIAvT~~~~ 508 (577)
..+.+..+. |+..|+.-..+.-
T Consensus 179 ~~~~~~~~~~~~~~~f~v~~G~d~~~ 204 (313)
T 3dz1_A 179 ITTLRGFQKDGSLRPLSILCGNGGLF 204 (313)
T ss_dssp HHHHHHHHHHTSSCCCEEEECGGGTT
T ss_pred HHHHHHhcCccCCCCeEEEeCCcHHH
Confidence 455565554 7777777665443
No 450
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=26.47 E-value=3.7e+02 Score=27.28 Aligned_cols=117 Identities=14% Similarity=0.164 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCce---
Q 008112 302 QVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAV--- 377 (577)
Q Consensus 302 ~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPv--- 377 (577)
+-+..+...+.+.+..++|...+......+.+.+-++. ..-+||. |-++|+++=...-+++++.|++.|..|
T Consensus 59 ~~~~~~v~~aa~~~~~VPValHLDHg~~~e~~~~ai~~GFtSVMiD----gS~~p~eeNi~~Tk~vv~~ah~~gvsVEaE 134 (307)
T 3n9r_A 59 DMAVGMVKIMCERYPHIPVALHLDHGTTFESCEKAVKAGFTSVMID----ASHHAFEENLELTSKVVKMAHNAGVSVEAE 134 (307)
T ss_dssp HHHHHHHHHHHHHSTTSCEEEEEEEECSHHHHHHHHHHTCSEEEEC----CTTSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEECCCCCCHHHHHHHHHhCCCcEEEE----CCCCCHHHHHHHHHHHHHHHHHcCCeEEEE
Q ss_pred -----EEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCH
Q 008112 378 -----IVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFP 424 (577)
Q Consensus 378 -----i~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP 424 (577)
+.-..+-.+-.....-+..|+.+.+.. -|+|++-.+-=|+.|.|+
T Consensus 135 LG~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~--TgvD~LAvaiGt~HG~Yk 184 (307)
T 3n9r_A 135 LGRLMGIEDNISVDEKDAVLVNPKEAEQFVKE--SQVDYLAPAIGTSHGAFK 184 (307)
T ss_dssp ESCCCCC----------CCSCCHHHHHHHHHH--HCCSEEEECSSCCSSSBC
T ss_pred eeeeccccCCcccccccccCCCHHHHHHHHHH--HCCCEEEEecCCcccccC
No 451
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=26.41 E-value=1.6e+02 Score=27.90 Aligned_cols=69 Identities=9% Similarity=0.133 Sum_probs=45.6
Q ss_pred cCHHHHHHHHhcCCCEEEEcCC-CCHHHH--HHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh--cCEEEEc
Q 008112 277 KDWDDIKFGVDNKVDFYAVSFV-KDAQVV--HELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGAMVA 346 (577)
Q Consensus 277 kD~~dI~~al~~gvD~I~~SfV-~sa~dv--~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~--sDGImIa 346 (577)
.+.+|++.+.+.|+|++.+-|. .|+..| .+++++.......+..+.=.-+. ..+.+.+|++. .|.|-+-
T Consensus 10 t~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~-~~~~i~~~~~~~~ld~vQLH 83 (205)
T 1nsj_A 10 TNLEDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELPPFVFRVGVFVNE-EPEKILDVASYVQLNAVQLH 83 (205)
T ss_dssp CSHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSC-CHHHHHHHHHHHTCSEEEEC
T ss_pred CcHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCC-CHHHHHHHHHhhCCCEEEEC
Confidence 3678999999999999998875 455443 44555444444445544444443 45667777765 7899884
No 452
>1i8d_A Riboflavin synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, transferase; 2.00A {Escherichia coli} SCOP: b.43.4.3 b.43.4.3 PDB: 1hze_A* 1i18_A* 1pkv_A*
Probab=26.36 E-value=1.5e+02 Score=28.59 Aligned_cols=49 Identities=22% Similarity=0.392 Sum_probs=40.9
Q ss_pred ccccccCCCCEEEEeCCeEEEEEEEEeCCeEEEEEe-------eCcEeccCceeeeCC
Q 008112 216 DFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVV-------DGGELKSRRHLNVRG 266 (577)
Q Consensus 216 ~~~~~v~~Gd~I~idDG~i~l~V~~v~~~~v~~~v~-------~gG~l~s~Kginlp~ 266 (577)
.+.+.++.||.|-+|. +.|+|.+++++.+.+.+. +=|.++....|||..
T Consensus 31 ~~~~~l~~g~SIAvnG--vcLTV~~v~~~~F~vdvipETl~~T~Lg~l~~Gd~VNLEr 86 (213)
T 1i8d_A 31 HMLDGLETGASVAHNG--CCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVER 86 (213)
T ss_dssp GGTTTCCTTCEEEETT--EEEEEEEEETTEEEEEEEHHHHHHSGGGGCCTTCEEEEEE
T ss_pred HHhccCCCCcEEEECC--EEeeEEEEcCCEEEEEEeHHHHhhcccccCCCCCEEEeCc
Confidence 5678999999999997 889999999999888775 346777778899853
No 453
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=26.27 E-value=58 Score=33.12 Aligned_cols=43 Identities=19% Similarity=0.373 Sum_probs=34.0
Q ss_pred cCCCCCCHHHHHHHHHhC--CcEEEEeccCCChHHHHHHHHHHHH
Q 008112 116 IGPSTNTREMIWKLAEAG--MNVARLNMSHGDHASHQKVIDLVKE 158 (577)
Q Consensus 116 iGPs~~~~e~l~~li~~G--m~v~RiN~sHg~~e~~~~~i~~ir~ 158 (577)
+|....+.+.++.++++| .+..-+|++||+.....+.|+.+|+
T Consensus 101 ~g~~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~ 145 (336)
T 1ypf_A 101 VGVKEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKK 145 (336)
T ss_dssp ECCSHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHH
Confidence 555444567788899999 9999999999988777777777775
No 454
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=26.23 E-value=5.2e+02 Score=26.07 Aligned_cols=133 Identities=16% Similarity=0.162 Sum_probs=75.4
Q ss_pred HHHHHHhcCCCEEEEcCCCCH---------------HHHHHHHHHHHhcCCCceEEEeecC-----hhhHhhHHHHHHh-
Q 008112 281 DIKFGVDNKVDFYAVSFVKDA---------------QVVHELKNYLKSCGADIHVIVKIES-----ADSIPNLHSIITA- 339 (577)
Q Consensus 281 dI~~al~~gvD~I~~SfV~sa---------------~dv~~lr~~l~~~~~~i~IiaKIEt-----~~gv~NldeIl~~- 339 (577)
+++.+++.|+|.|.+.+--|. +.+.++.+++++.|.. +..-+|. ..-.+.+-++++.
T Consensus 101 ~i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (337)
T 3ble_A 101 TVDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLK--INVYLEDWSNGFRNSPDYVKSLVEHL 178 (337)
T ss_dssp HHHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCE--EEEEEETHHHHHHHCHHHHHHHHHHH
T ss_pred hHHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCE--EEEEEEECCCCCcCCHHHHHHHHHHH
Confidence 789999999999988764443 2344444555566654 4455665 2222333333332
Q ss_pred ----cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHH-c-CCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEE
Q 008112 340 ----SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRS-M-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVM 413 (577)
Q Consensus 340 ----sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~-a-GKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~im 413 (577)
+|.|.++ |- .|. -.|.--.++++..++ . +.|+.+-++ | ..--|- .-...|+..|+|.+=
T Consensus 179 ~~~Ga~~i~l~--DT---~G~-~~P~~v~~lv~~l~~~~p~~~i~~H~H-------n-d~GlA~-AN~laAv~aGa~~vd 243 (337)
T 3ble_A 179 SKEHIERIFLP--DT---LGV-LSPEETFQGVDSLIQKYPDIHFEFHGH-------N-DYDLSV-ANSLQAIRAGVKGLH 243 (337)
T ss_dssp HTSCCSEEEEE--CT---TCC-CCHHHHHHHHHHHHHHCTTSCEEEECB-------C-TTSCHH-HHHHHHHHTTCSEEE
T ss_pred HHcCCCEEEEe--cC---CCC-cCHHHHHHHHHHHHHhcCCCeEEEEec-------C-CcchHH-HHHHHHHHhCCCEEE
Confidence 6777774 32 222 234444455555443 3 577776543 1 112222 223348899999887
Q ss_pred ec----cccCCCCCHHHHHHHH
Q 008112 414 LS----GETAHGKFPLKAVKVM 431 (577)
Q Consensus 414 Ls----~ETa~G~yP~eaV~~m 431 (577)
-| || ..|+=|.|.|-.+
T Consensus 244 ~tv~GlG~-~aGN~~~E~lv~~ 264 (337)
T 3ble_A 244 ASINGLGE-RAGNTPLEALVTT 264 (337)
T ss_dssp EBGGGCSS-TTCBCBHHHHHHH
T ss_pred Eecccccc-cccchhHHHHHHH
Confidence 43 56 6788888877654
No 455
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=26.12 E-value=80 Score=31.48 Aligned_cols=37 Identities=24% Similarity=0.331 Sum_probs=25.5
Q ss_pred HHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHH
Q 008112 400 DIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSL 436 (577)
Q Consensus 400 Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~ 436 (577)
|+..+...|+|++++..---....|.++++.+...+.
T Consensus 223 d~~~~~~~GadgV~vGsai~~~~~p~~~~~~l~~~~~ 259 (305)
T 2nv1_A 223 DAALMMQLGADGVFVGSGIFKSDNPAKFAKAIVEATT 259 (305)
T ss_dssp HHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcHHHHcCCCHHHHHHHHHHHHH
Confidence 5667777899999997444334568777776665543
No 456
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=25.96 E-value=3e+02 Score=28.04 Aligned_cols=95 Identities=18% Similarity=0.196 Sum_probs=52.5
Q ss_pred HHHHHh-cCEEEEcCCCc--cCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhcc
Q 008112 334 HSIITA-SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGA 409 (577)
Q Consensus 334 deIl~~-sDGImIaRGDL--g~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~ 409 (577)
+-.++. +|||++. |=- +..+..++-..+-+..++.++ -..|||.-|. ..+-+|..+.+. |-..|+
T Consensus 59 ~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~-grvpViaGvg---------~~st~eai~la~~A~~~Ga 127 (343)
T 2v9d_A 59 DDLIKAGVDGLFFL-GSGGEFSQLGAEERKAIARFAIDHVD-RRVPVLIGTG---------GTNARETIELSQHAQQAGA 127 (343)
T ss_dssp HHHHHTTCSCEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC---------SSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEeC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecC---------CCCHHHHHHHHHHHHhcCC
Confidence 333444 8999884 111 122333333333344443332 2478886543 334556655555 666799
Q ss_pred ceEEeccccCCCCCHHHHHHHHHHHHHHHh
Q 008112 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (577)
Q Consensus 410 D~imLs~ETa~G~yP~eaV~~m~~I~~~aE 439 (577)
|++|+..=--...-+.+.++....|+..++
T Consensus 128 davlv~~P~Y~~~s~~~l~~~f~~VA~a~~ 157 (343)
T 2v9d_A 128 DGIVVINPYYWKVSEANLIRYFEQVADSVT 157 (343)
T ss_dssp SEEEEECCSSSCCCHHHHHHHHHHHHHTCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999986432222335667788888876654
No 457
>2pn0_A Prokaryotic transcription elongation factor GREA/GREB; structural genomics, APC6349, PSI-2, protein structure initiative; HET: MSE; 1.70A {Nitrosomonas europaea}
Probab=25.92 E-value=1.1e+02 Score=27.39 Aligned_cols=64 Identities=20% Similarity=0.230 Sum_probs=41.7
Q ss_pred CCeeEEeecCCcEEEc---CCCEEEEEEe--c-CCCCceEEeccccc--cccccCCCCEEEEe--CC-eEEEEEEEEe
Q 008112 176 GPEVRSGDLPQPITLT---SGQEFTFTIQ--R-GVGSAECVSVNYDD--FVNDVEVGDMLLVD--GG-MMSLLVKSKT 242 (577)
Q Consensus 176 GpkiR~g~~~~~i~L~---~G~~v~lt~~--~-~~~~~~~i~v~~~~--~~~~v~~Gd~I~id--DG-~i~l~V~~v~ 242 (577)
.-+++.|.. +.++ .|+..++++- . .....+.|++..|- -+-..++||.|-+. +| ...++|.++.
T Consensus 54 ~~~V~~Gs~---V~l~d~~~g~~~~~~iVg~~ead~~~~~IS~~SPlG~ALlGk~vGD~v~v~~P~G~~~~~~I~~I~ 128 (141)
T 2pn0_A 54 PTVVTMNST---VRFRVESSAEEFCLTLVYPKDVDTSGEKISILAPVGSALLGLAQGDEIEWPKPGGGVLRVRIVEVT 128 (141)
T ss_dssp TTBCCTTCE---EEEEETTTCCEEEEEEECGGGCCSSSCEEETTSTTHHHHTTCBTTCEEEEECTTSSEEEEEEEEEE
T ss_pred CCEEEeCcE---EEEEECCCCCEEEEEEECHhHcCccCCEEcCCCHHHHHHcCCCCCCEEEEEcCCCCEEEEEEEEEE
Confidence 345655543 5553 5765555442 2 22345678887762 22356899999998 88 8999999987
No 458
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=25.83 E-value=5.1e+02 Score=26.22 Aligned_cols=145 Identities=15% Similarity=0.050 Sum_probs=81.9
Q ss_pred HHHHHHHhcCCCEEEEc----CCC--C----HHHHHHHHHHHHhcCCCceEEE-e-----------ecC------hhhHh
Q 008112 280 DDIKFGVDNKVDFYAVS----FVK--D----AQVVHELKNYLKSCGADIHVIV-K-----------IES------ADSIP 331 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~S----fV~--s----a~dv~~lr~~l~~~~~~i~Iia-K-----------IEt------~~gv~ 331 (577)
+.++++.+.|+++|-+. +-. + .+++.++++.+++.|-.+.-+. - +-+ ..+++
T Consensus 37 e~l~~aa~~G~~~vEl~~~~~~p~~~~~~e~~~~~~~l~~~l~~~GL~i~~~~~~~~~~p~~~~g~l~~~d~~~r~~~i~ 116 (387)
T 1bxb_A 37 YVVHKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDETGLKVPMVTANLFSDPAFKDGAFTSPDPWVRAYALR 116 (387)
T ss_dssp HHHHHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHHTCBCCEEECCCSSSGGGGGCSTTCSSHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEecCcccCCCCCChhhhHHHHHHHHHHHHHhCCEEEEEecCCCCCccccCCCCCCCCHHHHHHHHH
Confidence 45678889999999887 433 2 6789999999998876654332 1 111 22344
Q ss_pred hHHHHHHh-----cCEEEEcCCCccCCC--------CCCcHHHHHHHHHHHHHHc--CCceEEEehhhHhhh-----cCC
Q 008112 332 NLHSIITA-----SDGAMVARGDLGAEL--------PIEEVPLLQEEIIRTCRSM--GKAVIVATNMLESMI-----VHP 391 (577)
Q Consensus 332 NldeIl~~-----sDGImIaRGDLg~el--------g~e~v~~~qk~Ii~~c~~a--GKPvi~ATq~LeSM~-----~~~ 391 (577)
.+...++. ++.|.+..|--+.+. .++.+...-+++...+.++ |..+. +|.+- .+.
T Consensus 117 ~~~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~a~~~g~gv~l~-----lE~~~~~~~~~~~ 191 (387)
T 1bxb_A 117 KSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREALNFMAAYAEDQGYGYRFA-----LEPKPNEPRGDIY 191 (387)
T ss_dssp HHHHHHHHHHHHTCCEEEECCTTCEESCGGGCGGGTHHHHHHHHHHHHHHHHHHHTCCCEEE-----ECCCSSSSSSEES
T ss_pred HHHHHHHHHHHhCCCEEEECCCCCCccCCccCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEE-----EecCCCCCCCCcc
Confidence 45444443 667777655222111 1124555567777888877 55444 34443 123
Q ss_pred CCChHhHHHHHHHHHhccce-EEecccc----CCCCCHHHHHHHH
Q 008112 392 TPTRAEVSDIAIAVREGADA-VMLSGET----AHGKFPLKAVKVM 431 (577)
Q Consensus 392 ~PtrAEv~Dv~nav~~G~D~-imLs~ET----a~G~yP~eaV~~m 431 (577)
.+|-+++.++...+ |.+. +-+.-|| ..|.-|.+.++.+
T Consensus 192 ~~t~~~~~~ll~~v--~~~~~vgl~lD~gH~~~~g~d~~~~l~~~ 234 (387)
T 1bxb_A 192 FATVGSMLAFIHTL--DRPERFGLNPEFAHETMAGLNFVHAVAQA 234 (387)
T ss_dssp SCSHHHHHHHHTTS--SSGGGEEECCBHHHHHHTTCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHc--CCccceEEEEecCcccccCCCHHHHHHHh
Confidence 45666655544332 3334 5555555 3466666655543
No 459
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=25.80 E-value=1.7e+02 Score=27.69 Aligned_cols=69 Identities=4% Similarity=-0.018 Sum_probs=45.6
Q ss_pred cCHHHHHHHHhcCCCEEEEcCC-CCHHHH--HHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh--cCEEEEc
Q 008112 277 KDWDDIKFGVDNKVDFYAVSFV-KDAQVV--HELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGAMVA 346 (577)
Q Consensus 277 kD~~dI~~al~~gvD~I~~SfV-~sa~dv--~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~--sDGImIa 346 (577)
.+.+|++.+.+.|+|++.+-|. .|+..| .+++++.......+..+.=.-+. ..+.+.+|++. .|.|-+-
T Consensus 9 t~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~-~~~~i~~~~~~~~ld~vQLH 82 (203)
T 1v5x_A 9 TRLEDALLAEALGAFALGFVLAPGSRRRIAPEAARAIGEALGPFVVRVGVFRDQ-PPEEVLRLMEEARLQVAQLH 82 (203)
T ss_dssp CCHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSC-CHHHHHHHHHHTTCSEEEEC
T ss_pred CcHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCC-CHHHHHHHHHhhCCCEEEEC
Confidence 3678999999999999998875 455443 44555554444445544444443 46677777765 7888884
No 460
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=25.73 E-value=3e+02 Score=27.42 Aligned_cols=89 Identities=19% Similarity=0.142 Sum_probs=49.3
Q ss_pred cCEEEEcC--CCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhccceEEecc
Q 008112 340 SDGAMVAR--GDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSG 416 (577)
Q Consensus 340 sDGImIaR--GDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~D~imLs~ 416 (577)
+||+++.- |+ +..+..++-..+-+..++.++ -..|||.-+. ..+-+|..+.+. |-..|+|++|+..
T Consensus 50 v~gi~v~GttGE-~~~Lt~~Er~~v~~~~~~~~~-grvpviaGvg---------~~~t~~ai~la~~a~~~Gadavlv~~ 118 (304)
T 3l21_A 50 CDGLVVSGTTGE-SPTTTDGEKIELLRAVLEAVG-DRARVIAGAG---------TYDTAHSIRLAKACAAEGAHGLLVVT 118 (304)
T ss_dssp CSEEEESSTTTT-GGGSCHHHHHHHHHHHHHHHT-TTSEEEEECC---------CSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEEeCccccc-hhhCCHHHHHHHHHHHHHHhC-CCCeEEEeCC---------CCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 89999851 11 122233333333333333332 2468887543 334456555544 6678999999963
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHh
Q 008112 417 ETAHGKFPLKAVKVMHTVSLRTE 439 (577)
Q Consensus 417 ETa~G~yP~eaV~~m~~I~~~aE 439 (577)
=--...-+.+.++....|+..+.
T Consensus 119 P~y~~~s~~~l~~~f~~va~a~~ 141 (304)
T 3l21_A 119 PYYSKPPQRGLQAHFTAVADATE 141 (304)
T ss_dssp CCSSCCCHHHHHHHHHHHHTSCS
T ss_pred CCCCCCCHHHHHHHHHHHHHhcC
Confidence 32222235677888888877664
No 461
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=25.71 E-value=5.6e+02 Score=26.28 Aligned_cols=114 Identities=17% Similarity=0.106 Sum_probs=65.4
Q ss_pred CCCccCHHHH--------HHHHhcCCCEEEEcCC-------------CC----------------HHHHHHHHHHHHhcC
Q 008112 273 SITEKDWDDI--------KFGVDNKVDFYAVSFV-------------KD----------------AQVVHELKNYLKSCG 315 (577)
Q Consensus 273 ~ltekD~~dI--------~~al~~gvD~I~~SfV-------------~s----------------a~dv~~lr~~l~~~~ 315 (577)
.||..|++.+ +.+.+.|+|+|=+-.- +. .+-++.+|+.+ +
T Consensus 150 ~mt~~eI~~ii~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~v---g 226 (361)
T 3gka_A 150 ALELDEIPGVVAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVW---S 226 (361)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHH---C
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHc---C
Confidence 7899998887 4567899999977443 22 12233333333 4
Q ss_pred CCceEEEeecChh---h------HhhHHHHHHh-----cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHH-HcCCceEEE
Q 008112 316 ADIHVIVKIESAD---S------IPNLHSIITA-----SDGAMVARGDLGAELPIEEVPLLQEEIIRTCR-SMGKAVIVA 380 (577)
Q Consensus 316 ~~i~IiaKIEt~~---g------v~NldeIl~~-----sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~-~aGKPvi~A 380 (577)
.+ .|..||=--+ + +++..++++. +|.|-+..|..+ .+- ++..+ ..++|+|..
T Consensus 227 ~~-~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~----~~~--------~~~ik~~~~iPvi~~ 293 (361)
T 3gka_A 227 AA-RVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESFGG----DAI--------GQQLKAAFGGPFIVN 293 (361)
T ss_dssp GG-GEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCST----TCC--------HHHHHHHHCSCEEEE
T ss_pred CC-eEEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCCC----HHH--------HHHHHHHcCCCEEEe
Confidence 55 6888884321 1 2333344432 788877766522 111 22222 237898875
Q ss_pred ehhhHhhhcCCCCChHhHHHHHHHHHhc-cceEEec
Q 008112 381 TNMLESMIVHPTPTRAEVSDIAIAVREG-ADAVMLS 415 (577)
Q Consensus 381 Tq~LeSM~~~~~PtrAEv~Dv~nav~~G-~D~imLs 415 (577)
.. . |+. +...++..| +|+|++.
T Consensus 294 Gg---------i-t~e---~a~~~l~~G~aD~V~iG 316 (361)
T 3gka_A 294 EN---------F-TLD---SAQAALDAGQADAVAWG 316 (361)
T ss_dssp SS---------C-CHH---HHHHHHHTTSCSEEEES
T ss_pred CC---------C-CHH---HHHHHHHcCCccEEEEC
Confidence 43 2 333 355677787 9999984
No 462
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=25.68 E-value=1.5e+02 Score=29.04 Aligned_cols=103 Identities=16% Similarity=0.148 Sum_probs=57.9
Q ss_pred cCHHH-HHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEee---cC--------hhhHhhHHHHHHhcCEEE
Q 008112 277 KDWDD-IKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKI---ES--------ADSIPNLHSIITASDGAM 344 (577)
Q Consensus 277 kD~~d-I~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKI---Et--------~~gv~NldeIl~~sDGIm 344 (577)
.|.+. |+.+.+.|++.++++-+ +.++...+.++....+ ++...+-| +. .+.++.+++.+...+.-.
T Consensus 27 ~d~~~vl~~~~~~GV~~~v~~~~-~~~~~~~~~~la~~~~-~v~~~~GiHP~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 104 (301)
T 2xio_A 27 DDLQDVIGRAVEIGVKKFMITGG-NLQDSKDALHLAQTNG-MFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKV 104 (301)
T ss_dssp CCHHHHHHHHHHHTEEEEEECCC-SHHHHHHHHHHHTTCT-TEEEEECCCGGGTHHHHHHCHHHHHHHHHHHHHTCTTTE
T ss_pred cCHHHHHHHHHHCCCCEEEEeCC-CHHHHHHHHHHHHHCC-CEEEEEEECcChhhhCcccccHHHHHHHHHHHhcCCCCe
Confidence 35444 56677899998887754 6788888877654432 33222223 11 022444444444321122
Q ss_pred EcCCCccCCCCC-C-cHHHHH----HHHHHHHHHcCCceEEEe
Q 008112 345 VARGDLGAELPI-E-EVPLLQ----EEIIRTCRSMGKAVIVAT 381 (577)
Q Consensus 345 IaRGDLg~elg~-e-~v~~~q----k~Ii~~c~~aGKPvi~AT 381 (577)
+|=|..|++... . .-...| +..++.|++.|+|+++-|
T Consensus 105 ~aIGEiGLd~~~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH~ 147 (301)
T 2xio_A 105 VAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHC 147 (301)
T ss_dssp EEEEEEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEEE
T ss_pred EEEEEeeCCCCcCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 333566666532 1 123455 456688999999999866
No 463
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=25.67 E-value=4e+02 Score=26.23 Aligned_cols=97 Identities=16% Similarity=0.055 Sum_probs=54.5
Q ss_pred hHHHHHH-h-cCEEEEcCCCc--cCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHH
Q 008112 332 NLHSIIT-A-SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVR 406 (577)
Q Consensus 332 NldeIl~-~-sDGImIaRGDL--g~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~ 406 (577)
.++-.++ . +||+++. |=- +..+..++-..+-+..++.++ -..|||.-|. ..+-.|..+.+. |-.
T Consensus 29 lv~~li~~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg---------~~~t~~ai~la~~a~~ 97 (293)
T 1f6k_A 29 IIRHNIDKMKVDGLYVG-GSTGENFMLSTEEKKEIFRIAKDEAK-DQIALIAQVG---------SVNLKEAVELGKYATE 97 (293)
T ss_dssp HHHHHHHTSCCSEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEECC---------CSCHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCcEEEeC-ccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEecC---------CCCHHHHHHHHHHHHh
Confidence 3345555 4 8999984 211 122333333333344443332 2478886543 334445555444 667
Q ss_pred hccceEEeccccCCCCCHHHHHHHHHHHHHHHh
Q 008112 407 EGADAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (577)
Q Consensus 407 ~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE 439 (577)
.|+|++|+..=--...-+.+.++....|+..+.
T Consensus 98 ~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~ 130 (293)
T 1f6k_A 98 LGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETG 130 (293)
T ss_dssp HTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHC
T ss_pred cCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 799999986433223335677888888888775
No 464
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=25.66 E-value=1.7e+02 Score=29.83 Aligned_cols=64 Identities=13% Similarity=0.084 Sum_probs=39.2
Q ss_pred HHHHHhcCCCEEEEcC--C-----------CCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh--cCEEEEc
Q 008112 282 IKFGVDNKVDFYAVSF--V-----------KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGAMVA 346 (577)
Q Consensus 282 I~~al~~gvD~I~~Sf--V-----------~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~--sDGImIa 346 (577)
++...+.|+|+|-++- . .+.+-+.++++.+ +++|++- ......++.+++++. +|.|++|
T Consensus 245 a~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-----~iPVi~~-Ggi~t~e~a~~~l~~G~aD~V~iG 318 (349)
T 3hgj_A 245 ARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV-----GLRTGAV-GLITTPEQAETLLQAGSADLVLLG 318 (349)
T ss_dssp HHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH-----CCEEEEC-SSCCCHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc-----CceEEEE-CCCCCHHHHHHHHHCCCceEEEec
Confidence 3445578999999983 1 0123344455443 4666662 322334567777775 8999999
Q ss_pred CCCcc
Q 008112 347 RGDLG 351 (577)
Q Consensus 347 RGDLg 351 (577)
|+=|+
T Consensus 319 R~~la 323 (349)
T 3hgj_A 319 RVLLR 323 (349)
T ss_dssp THHHH
T ss_pred HHHHh
Confidence 98553
No 465
>2jpp_A Translational repressor; RNA recognition, protein/RNA, CSRA, RSMA, shine-dalgarno; NMR {Pseudomonas fluorescens}
Probab=25.53 E-value=91 Score=25.09 Aligned_cols=29 Identities=10% Similarity=0.288 Sum_probs=24.0
Q ss_pred cCCCCEEEEeCCeEEEEEEEEeCCeEEEEE
Q 008112 221 VEVGDMLLVDGGMMSLLVKSKTEDSVKCEV 250 (577)
Q Consensus 221 v~~Gd~I~idDG~i~l~V~~v~~~~v~~~v 250 (577)
-++|..|.|+| .|..+|.++.++.|..-+
T Consensus 6 Rk~GEsI~IGd-~I~ItVl~v~g~~VrLGI 34 (70)
T 2jpp_A 6 RKVGESINIGD-DITITILGVSGQQVRIGI 34 (70)
T ss_dssp EETTCEEEETT-TEEEEEEEEETTEEEEEE
T ss_pred ccCCCeEEECC-CEEEEEEEEeCCEEEEEE
Confidence 47899999987 799999999988876543
No 466
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=25.48 E-value=1.1e+02 Score=30.89 Aligned_cols=71 Identities=8% Similarity=0.031 Sum_probs=44.9
Q ss_pred hhcCc-eEEEEcCChHHHHHHHhhCCCCeEEEEcCcHHHhhh-------hcccCCeeEEEeccCCCHHHHHHHHH-HHHH
Q 008112 472 NTLGT-SIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQR-------LSLYQGVCPIYMEFSDDAEETFDNAL-GLLQ 542 (577)
Q Consensus 472 ~~~~a-aIiV~T~sG~tA~~is~~RP~~PIIAvT~~~~taR~-------L~L~~GV~Pvl~~~~~d~d~~i~~al-~~l~ 542 (577)
.+.+| +|++---.-.-++.+++-=+ +|+|.+-.-..+=-| |-++.+-.|=+.+...|....+..|+ +|..
T Consensus 189 ~eAGA~~ivlE~vp~~~a~~it~~l~-iP~igIGaG~~~dgQvLV~~D~lG~~~~~~pkf~k~y~~~~~~~~~a~~~y~~ 267 (281)
T 1oy0_A 189 AEAGAFAVVMEMVPAELATQITGKLT-IPTVGIGAGPNCDGQVLVWQDMAGFSGAKTARFVKRYADVGGELRRAAMQYAQ 267 (281)
T ss_dssp HHHTCSEEEEESCCHHHHHHHHHHCS-SCEEEESSCSCSSEEEECHHHHTTCSCSCCCTTCCCCCCHHHHHHHHHHHHHH
T ss_pred HHcCCcEEEEecCCHHHHHHHHHhCC-CCEEEeCCCCCCCcceeeHhhhcCCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Confidence 35688 78885544567888887654 899998654333222 44555666655666667777776666 4544
Q ss_pred H
Q 008112 543 K 543 (577)
Q Consensus 543 e 543 (577)
+
T Consensus 268 ~ 268 (281)
T 1oy0_A 268 E 268 (281)
T ss_dssp H
T ss_pred H
Confidence 4
No 467
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=25.42 E-value=1.9e+02 Score=23.10 Aligned_cols=71 Identities=14% Similarity=0.193 Sum_probs=39.3
Q ss_pred CCcEEEcCCCEEEEEEe-cCCCCceEEec-cccccccccCCCC-EEEEeCCeEEEEEEEEe---CCeEEEEEeeC-cEe
Q 008112 185 PQPITLTSGQEFTFTIQ-RGVGSAECVSV-NYDDFVNDVEVGD-MLLVDGGMMSLLVKSKT---EDSVKCEVVDG-GEL 256 (577)
Q Consensus 185 ~~~i~L~~G~~v~lt~~-~~~~~~~~i~v-~~~~~~~~v~~Gd-~I~idDG~i~l~V~~v~---~~~v~~~v~~g-G~l 256 (577)
+..+.+.+|+.++|.-. .+.......|. |-..+... .-+. .+.-+++.-.|.+..+. .+...|.+.|. |..
T Consensus 12 p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~-~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~ 89 (100)
T 3knb_A 12 PSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQ-EQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSD 89 (100)
T ss_dssp CSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTT-GGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred CCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeee-ccceeeeecccceEEEEEcCCCccCCEEEEEEEEECCCEE
Confidence 45688999999999754 22222334453 22222111 1111 23445666778877664 34678999885 443
No 468
>2bti_A Carbon storage regulator homolog; RMSA, CSRA, RNA binding protein; 2.0A {Yersinia enterocolitica} PDB: 1y00_A
Probab=25.38 E-value=94 Score=24.47 Aligned_cols=30 Identities=20% Similarity=0.351 Sum_probs=24.5
Q ss_pred ccCCCCEEEEeCCeEEEEEEEEeCCeEEEEE
Q 008112 220 DVEVGDMLLVDGGMMSLLVKSKTEDSVKCEV 250 (577)
Q Consensus 220 ~v~~Gd~I~idDG~i~l~V~~v~~~~v~~~v 250 (577)
.-++|..|.|+| .|..+|.++.++.|..-+
T Consensus 7 tRk~GE~I~Igd-~I~I~Vl~i~g~~VrlGI 36 (63)
T 2bti_A 7 TRRVGETLMIGD-EVTVTVLGVKGNQVRIGV 36 (63)
T ss_dssp EEETTCEEEETT-TEEEEEEEEETTEEEEEE
T ss_pred eccCCCeEEeCC-CEEEEEEEEeCCEEEEEE
Confidence 347899999988 899999999988876543
No 469
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=25.35 E-value=6.4e+02 Score=26.86 Aligned_cols=152 Identities=12% Similarity=0.033 Sum_probs=93.3
Q ss_pred CCCccCHHHH-HHHHhcCCCEEEEcC----CC-----CHHHHHHHHHHHHhcCCCceEEEeec--ChhhHh---------
Q 008112 273 SITEKDWDDI-KFGVDNKVDFYAVSF----VK-----DAQVVHELKNYLKSCGADIHVIVKIE--SADSIP--------- 331 (577)
Q Consensus 273 ~ltekD~~dI-~~al~~gvD~I~~Sf----V~-----sa~dv~~lr~~l~~~~~~i~IiaKIE--t~~gv~--------- 331 (577)
.++..|+..| +...+.|++.|=+-+ +. ++++.+.++.+-+. ..++.+.+.+= +..|..
T Consensus 26 ~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~-~~~~~l~~l~R~~N~~G~~~~~ddv~~~ 104 (464)
T 2nx9_A 26 RLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQA-MPNTPLQMLLRGQNLLGYRHYADDVVDT 104 (464)
T ss_dssp CCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHH-CSSSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHh-CCCCeEEEEeccccccCcccccchhhHH
Confidence 4555665554 444568999987753 11 45555555554332 34555555442 223332
Q ss_pred hHHHHHHh-cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhcc
Q 008112 332 NLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGA 409 (577)
Q Consensus 332 NldeIl~~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~ 409 (577)
+++..++. .|.|-|- ....++ .-.+..++.++++|+.+..+- ++...+.=+...+.+++. +...|+
T Consensus 105 ~v~~a~~~Gvd~i~if-------~~~sd~-~ni~~~i~~ak~~G~~v~~~i----~~~~~~~~~~e~~~~~a~~l~~~Ga 172 (464)
T 2nx9_A 105 FVERAVKNGMDVFRVF-------DAMNDV-RNMQQALQAVKKMGAHAQGTL----CYTTSPVHNLQTWVDVAQQLAELGV 172 (464)
T ss_dssp HHHHHHHTTCCEEEEC-------CTTCCT-HHHHHHHHHHHHTTCEEEEEE----ECCCCTTCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCcCEEEEE-------EecCHH-HHHHHHHHHHHHCCCEEEEEE----EeeeCCCCCHHHHHHHHHHHHHCCC
Confidence 34444444 6755542 122223 234678899999999986432 233334446677777776 667899
Q ss_pred ceEEeccccCCCCCHHHHHHHHHHHHHHH
Q 008112 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRT 438 (577)
Q Consensus 410 D~imLs~ETa~G~yP~eaV~~m~~I~~~a 438 (577)
|.|.|. +|+=+-.|.++-+.+..+.++.
T Consensus 173 d~I~l~-DT~G~~~P~~v~~lv~~l~~~~ 200 (464)
T 2nx9_A 173 DSIALK-DMAGILTPYAAEELVSTLKKQV 200 (464)
T ss_dssp SEEEEE-ETTSCCCHHHHHHHHHHHHHHC
T ss_pred CEEEEc-CCCCCcCHHHHHHHHHHHHHhc
Confidence 999995 8988899999999988887765
No 470
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=25.34 E-value=1.3e+02 Score=30.30 Aligned_cols=61 Identities=11% Similarity=0.131 Sum_probs=43.0
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhh--HhhHHHHHHh-cCEEEEcC
Q 008112 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADS--IPNLHSIITA-SDGAMVAR 347 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~g--v~NldeIl~~-sDGImIaR 347 (577)
.+.++.+++.|+|+|.+.. -+.++++++++.+ +.+++|.| --| .+|+.++++. +|+|-++.
T Consensus 218 lee~~eA~~aGaD~I~ld~-~~~e~l~~~v~~~---~~~~~I~A----SGGIt~~~i~~~a~~GvD~isvGs 281 (296)
T 1qap_A 218 LDELDDALKAGADIIMLDN-FNTDQMREAVKRV---NGQARLEV----SGNVTAETLREFAETGVDFISVGA 281 (296)
T ss_dssp HHHHHHHHHTTCSEEEESS-CCHHHHHHHHHTT---CTTCCEEE----CCCSCHHHHHHHHHTTCSEEECSH
T ss_pred HHHHHHHHHcCCCEEEECC-CCHHHHHHHHHHh---CCCCeEEE----ECCCCHHHHHHHHHcCCCEEEEeH
Confidence 4668888999999999987 5777887777654 33444433 233 4577777776 89998874
No 471
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=25.31 E-value=4.6e+02 Score=25.74 Aligned_cols=89 Identities=20% Similarity=0.243 Sum_probs=50.8
Q ss_pred cCEEEEcCCCc--cCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHH-HHHHhccceEEecc
Q 008112 340 SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIA-IAVREGADAVMLSG 416 (577)
Q Consensus 340 sDGImIaRGDL--g~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~-nav~~G~D~imLs~ 416 (577)
+||+++. |=- +..+..++-..+-+..++.++ -..|+|.-+. ..+-.|..+.+ .|-..|+|++|+..
T Consensus 36 v~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGvg---------~~~t~~ai~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 36 TNSIVAV-GTTGEASTLSMEEHTQVIKEIIRVAN-KRIPIIAGTG---------ANSTREAIELTKAAKDLGADAALLVT 104 (291)
T ss_dssp CCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC---------CSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEEEC-ccccccccCCHHHHHHHHHHHHHHhC-CCCeEEEeCC---------CCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 8999875 211 122333333333333444332 2468887543 33445555544 46778999999863
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHh
Q 008112 417 ETAHGKFPLKAVKVMHTVSLRTE 439 (577)
Q Consensus 417 ETa~G~yP~eaV~~m~~I~~~aE 439 (577)
=--...-+.+.++....|+..+.
T Consensus 105 P~y~~~~~~~l~~~f~~ia~a~~ 127 (291)
T 3tak_A 105 PYYNKPTQEGLYQHYKAIAEAVE 127 (291)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCHHHHHHHHHHHHHhcC
Confidence 32222335678888888888775
No 472
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=25.04 E-value=2.7e+02 Score=27.49 Aligned_cols=95 Identities=12% Similarity=0.054 Sum_probs=51.4
Q ss_pred HHHHHh-cCEEEEcCCCc--cCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhcc
Q 008112 334 HSIITA-SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGA 409 (577)
Q Consensus 334 deIl~~-sDGImIaRGDL--g~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~ 409 (577)
+-.++. +||+++. |-- +..+..++-..+-+..++.++ -..|||.-+. ..+-+|..+.+. |-..|+
T Consensus 29 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGvg---------~~~t~~ai~la~~a~~~Ga 97 (292)
T 2ojp_A 29 DYHVASGTSAIVSV-GTTGESATLNHDEHADVVMMTLDLAD-GRIPVIAGTG---------ANATAEAISLTQRFNDSGI 97 (292)
T ss_dssp HHHHHHTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC---------CSSHHHHHHHHHHTTTSSC
T ss_pred HHHHHcCCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHhC-CCCcEEEecC---------CccHHHHHHHHHHHHhcCC
Confidence 334444 8999985 111 122333333333334443332 2478886543 334456655555 556799
Q ss_pred ceEEeccccCCCCCHHHHHHHHHHHHHHHh
Q 008112 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (577)
Q Consensus 410 D~imLs~ETa~G~yP~eaV~~m~~I~~~aE 439 (577)
|++|+..=--...-+.+.++....|+..+.
T Consensus 98 davlv~~P~y~~~s~~~l~~~f~~ia~a~~ 127 (292)
T 2ojp_A 98 VGCLTVTPYYNRPSQEGLYQHFKAIAEHTD 127 (292)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHTTCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999986432222234666777777766553
No 473
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=25.01 E-value=2.8e+02 Score=27.50 Aligned_cols=87 Identities=17% Similarity=0.206 Sum_probs=56.5
Q ss_pred HHHHHHhcCC-CceEEEeecChhhHhhHHHHHHh-cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhh
Q 008112 307 LKNYLKSCGA-DIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNML 384 (577)
Q Consensus 307 lr~~l~~~~~-~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~L 384 (577)
+++.+.. |. .+.+++.+.+++-++.+ ... .|.+++..-|- + .+...++. .+..+...|+|+++=++
T Consensus 30 ~k~~l~~-G~~~~gl~~~~~~p~~~e~a---~~~GaD~v~lDlEh~----~-~~~~~~~~-~l~a~~~~~~~~~VRv~-- 97 (287)
T 2v5j_A 30 FKAALKA-GRPQIGLWLGLSSSYSAELL---AGAGFDWLLIDGEHA----P-NNVQTVLT-QLQAIAPYPSQPVVRPS-- 97 (287)
T ss_dssp HHHHHHT-TCCEEEEEECSCCHHHHHHH---HTSCCSEEEEESSSS----S-CCHHHHHH-HHHHHTTSSSEEEEECS--
T ss_pred HHHHHHC-CCcEEEEEEECCCHHHHHHH---HhCCCCEEEEeCCCc----c-chHHHHHH-HHHHHHhcCCCEEEEEC--
Confidence 6666654 44 57789999887655432 223 89999987774 2 22333333 34555667899887543
Q ss_pred HhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 385 ESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 385 eSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
.... .|+..++..|+|+||+.
T Consensus 98 -------~~d~---~di~~~ld~ga~~ImlP 118 (287)
T 2v5j_A 98 -------WNDP---VQIKQLLDVGTQTLLVP 118 (287)
T ss_dssp -------SSCH---HHHHHHHHTTCCEEEES
T ss_pred -------CCCH---HHHHHHHhCCCCEEEeC
Confidence 2222 27888888999999996
No 474
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=25.00 E-value=4.5e+02 Score=25.52 Aligned_cols=126 Identities=20% Similarity=0.315 Sum_probs=72.6
Q ss_pred HHHHHHHhcCCCEEEEc-------CCCCHHHHHH----HHHHHHhcCCCceEEEeecC---hhhHhhHHH--HH--HhcC
Q 008112 280 DDIKFGVDNKVDFYAVS-------FVKDAQVVHE----LKNYLKSCGADIHVIVKIES---ADSIPNLHS--II--TASD 341 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~S-------fV~sa~dv~~----lr~~l~~~~~~i~IiaKIEt---~~gv~Nlde--Il--~~sD 341 (577)
+.++.|.+.|++.|+++ +.++.+++.+ +++.+.+.+..+.|..=+|- ++..+.+++ +. .-+|
T Consensus 24 ~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~i~I~~G~Ev~~~~~~~~~l~~~~~~~l~~~~ 103 (262)
T 3qy7_A 24 EMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIKEDIPLHVLPGQEIRIYGEVEQDLAKRQLLSLNDTK 103 (262)
T ss_dssp HHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHHTTCCCEEECCCEEECCTTHHHHHHTTCSCCGGGSS
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEecCeEEecchhHHHHHhcCCCcEECCce
Confidence 36888999999998763 2234555444 44444444556777777763 444444443 22 2256
Q ss_pred EEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHh-----HHHHHHHHHhccceEEecc
Q 008112 342 GAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAE-----VSDIAIAVREGADAVMLSG 416 (577)
Q Consensus 342 GImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAE-----v~Dv~nav~~G~D~imLs~ 416 (577)
.+++ |++...++....+++....++|--.|+| -|+|-. ...+..++..|+ ++-++.
T Consensus 104 ~vl~-------e~~~~~~~~~~~~~l~~i~~~g~v~ILA-----------HPeRy~~~~~~~~~l~~l~~~G~-~iEiN~ 164 (262)
T 3qy7_A 104 YILI-------EFPFDHVPRYAEQLFYDLQLKGYIPVIA-----------HPERNREIRENPSLLYHLVEKGA-ASQITS 164 (262)
T ss_dssp EEEE-------ECCTTCCCTTHHHHHHHHHHTTCEEEEE-----------CGGGCHHHHHCTHHHHHHHHTTC-EEEEEH
T ss_pred EEEE-------eCCCccCHHHHHHHHHHHHHCCCcEEEE-----------CCCccccccccHHHHHHHHHCCC-EEEEEC
Confidence 6665 4555555555566666666666555555 344422 133567788885 455665
Q ss_pred ccCCCCCH
Q 008112 417 ETAHGKFP 424 (577)
Q Consensus 417 ETa~G~yP 424 (577)
-+-.|.|-
T Consensus 165 ~s~~g~~g 172 (262)
T 3qy7_A 165 GSLAGIFG 172 (262)
T ss_dssp HHHHTTTC
T ss_pred CccCcccc
Confidence 55556554
No 475
>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A
Probab=24.97 E-value=2.6e+02 Score=28.27 Aligned_cols=125 Identities=19% Similarity=0.229 Sum_probs=71.2
Q ss_pred CEEEEcCCCCHHHHHHHHHH-HHhcCCCceEEEeecChh----------------------hHhhHHHHHHhcCEEEEcC
Q 008112 291 DFYAVSFVKDAQVVHELKNY-LKSCGADIHVIVKIESAD----------------------SIPNLHSIITASDGAMVAR 347 (577)
Q Consensus 291 D~I~~SfV~sa~dv~~lr~~-l~~~~~~i~IiaKIEt~~----------------------gv~NldeIl~~sDGImIaR 347 (577)
..++.|| +.+.+.++++. ..+.+.++.+..-++... ...++.++...+|++-..-
T Consensus 204 ~v~i~SF--~~~~l~~~~~~~~p~~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~i~p~~ 281 (356)
T 1ydy_A 204 KVYLQCF--DADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDY 281 (356)
T ss_dssp SBEEEES--CHHHHHHHHHTHHHHHTCCCEEEEEECCGGGCCCEEECTTSCEEECCCGGGGSTTHHHHHTTTCSEEEEBG
T ss_pred CEEEEcC--CHHHHHHHHhhcccccCCCceEEEEeccCcccccccccccccccccchhhhcchhhHHHHHhhCeEEccCH
Confidence 4678898 77778888876 333355666655554321 1245667766678776532
Q ss_pred CCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCC-CCCh-HhHHHHHH--HHHhccceEEeccccCCCCC
Q 008112 348 GDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHP-TPTR-AEVSDIAI--AVREGADAVMLSGETAHGKF 423 (577)
Q Consensus 348 GDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~-~Ptr-AEv~Dv~n--av~~G~D~imLs~ETa~G~y 423 (577)
.-+..+..... ......+++.|+++|.+|.+-|- +++ .|.. .+..+++. ....|+|+|+- .|
T Consensus 282 ~~~~~~~~~~~-~~~~~~~v~~ah~~Gl~V~~WTv------n~~~l~~~~~d~~~~~~~~l~~~GVDgIiT-------D~ 347 (356)
T 1ydy_A 282 HMLIEETSQPG-NIKLTGMVQDAQQNKLVVHPYTV------RSDKLPEYTPDVNQLYDALYNKAGVNGLFT-------DF 347 (356)
T ss_dssp GGTBCTTCBTT-BCCBCSHHHHHHHTTCEECCBCB------CTTSCCTTCSSHHHHHHHHHTTSCCSEEEE-------SC
T ss_pred HHhcccccccc-ccCCHHHHHHHHHCCCEEEEEEE------CcccccccccCHHHHHHHHHHHcCCCEEEe-------CC
Confidence 22110000000 00125688999999999998772 111 1111 12344533 34789999985 58
Q ss_pred HHHHHHHH
Q 008112 424 PLKAVKVM 431 (577)
Q Consensus 424 P~eaV~~m 431 (577)
|-.+.+++
T Consensus 348 P~~~~~~l 355 (356)
T 1ydy_A 348 PDKAVKFL 355 (356)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 98877764
No 476
>1vpz_A Carbon storage regulator homolog; CSRA-like fold, structural genomics, joint center for struct genomics, JCSG; HET: MSE; 2.05A {Pseudomonas aeruginosa} SCOP: b.151.1.1
Probab=24.91 E-value=93 Score=25.21 Aligned_cols=32 Identities=19% Similarity=0.309 Sum_probs=26.0
Q ss_pred cccccCCCCEEEEeCCeEEEEEEEEeCCeEEEE
Q 008112 217 FVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCE 249 (577)
Q Consensus 217 ~~~~v~~Gd~I~idDG~i~l~V~~v~~~~v~~~ 249 (577)
+.-.=++|..|.|.| .|..+|.++.++.|..-
T Consensus 14 LvLtRK~GEsI~IGd-dI~ItVl~i~g~qVrLG 45 (73)
T 1vpz_A 14 LILTRRVGETLMVGD-DVTVTVLGVKGNQVRIG 45 (73)
T ss_dssp EEEEEETTCEEEETT-TEEEEEEEEETTEEEEE
T ss_pred EEEEccCCCEEEeCC-CEEEEEEEEeCCEEEEE
Confidence 333458999999998 89999999999887553
No 477
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=24.83 E-value=3.7e+02 Score=27.35 Aligned_cols=139 Identities=11% Similarity=0.081 Sum_probs=77.5
Q ss_pred HHHHHHHhccceEEeccccCCC-CCHHHHHHHHHHHHHHHhccc-cCCC---CCCCCCccc-CCChhHHHHHHHHHHHhh
Q 008112 400 DIAIAVREGADAVMLSGETAHG-KFPLKAVKVMHTVSLRTEATI-TGGA---MPPNLGQAF-KNHMSEMFAYHATMMSNT 473 (577)
Q Consensus 400 Dv~nav~~G~D~imLs~ETa~G-~yP~eaV~~m~~I~~~aE~~~-~~~~---~~~~l~~~~-~~~~~~~ia~~a~~~a~~ 473 (577)
++-.++..|+|++-+.-=.-.| .|-.+.++.+.+++.+++++- .... .|...+... ....++.++ .++++|.+
T Consensus 133 sVe~AvrlGADaV~~l~~i~~Gs~~e~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va-~aaRiAaE 211 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRINLSDAGTAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVI-QSVAIAAG 211 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEECTTCTTHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHH-HHHHHHHT
T ss_pred CHHHHHHCCCCEEEEEEEECCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHH-HHHHHHHH
Confidence 6888999999996521011122 455778888888888887651 1000 010000111 123456665 56677888
Q ss_pred cCce----EEEEcCChHHHHHHHhhCCCCeEEEEc-----CcHHHhhhh--ccc-CCeeEEEec---c---CCCHHHHHH
Q 008112 474 LGTS----IVVFTRTGFMAILLSHYRPSGTIFAFT-----NEKRIQQRL--SLY-QGVCPIYME---F---SDDAEETFD 535 (577)
Q Consensus 474 ~~aa----IiV~T~sG~tA~~is~~RP~~PIIAvT-----~~~~taR~L--~L~-~GV~Pvl~~---~---~~d~d~~i~ 535 (577)
+++- |+=..-+...++.++-. | +||+..- +.+.+.+.+ ++- -|..-+.+. | ..|...+++
T Consensus 212 LGADs~~tivK~~y~e~f~~Vv~a~-~-vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNIfQ~~~~dp~~~v~ 289 (307)
T 3fok_A 212 LGNDSSYTWMKLPVVEEMERVMEST-T-MPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTLLYPQDGDVAAAVD 289 (307)
T ss_dssp CSSCCSSEEEEEECCTTHHHHGGGC-S-SCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTSSCSSSCHHHHHH
T ss_pred hCCCcCCCEEEeCCcHHHHHHHHhC-C-CCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhhccCCCCCHHHHHH
Confidence 8875 55432234556666555 3 6776653 234555543 344 588877763 2 357777777
Q ss_pred HHHHHH
Q 008112 536 NALGLL 541 (577)
Q Consensus 536 ~al~~l 541 (577)
....+.
T Consensus 290 al~~iV 295 (307)
T 3fok_A 290 TAARLV 295 (307)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666554
No 478
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=24.77 E-value=3.8e+02 Score=24.04 Aligned_cols=126 Identities=11% Similarity=0.099 Sum_probs=65.5
Q ss_pred HHHHHHHHhcCCCEEEEcC--CCCHHHHHHHHHHHHhcCCCceEEEeecC-------------------hhhHhhHHHHH
Q 008112 279 WDDIKFGVDNKVDFYAVSF--VKDAQVVHELKNYLKSCGADIHVIVKIES-------------------ADSIPNLHSII 337 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~Sf--V~sa~dv~~lr~~l~~~~~~i~IiaKIEt-------------------~~gv~NldeIl 337 (577)
.+++..+++.|++.+...- ++..+-+..+.+.+. .+. ++..++. ....+-+..+.
T Consensus 65 ~~~~~~~~~~Ga~~~l~kp~~~~~~~l~~~i~~~~~---~~~-~~~~~d~~~~~~~~~v~~~~g~~~~~~~~~~~i~~~~ 140 (237)
T 3cwo_X 65 QAMVIEAIKAGAKDFIVNTAAVENPSLITQIAQTFG---SQA-VVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVE 140 (237)
T ss_dssp HHHHHHHHHTTCCEEEESHHHHHCTHHHHHHHHHHT---GGG-EEEEEEEEESSSCEEEEETTTTEEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHCCHHheEeCCcccChHHHHHHHHHHhC---CCc-eEEEeeecccCCcEEEEEeCCccccccCHHHHHHHHh
Confidence 6778889999999876542 345555666665553 221 1111111 12223334444
Q ss_pred Hh-cCEEE-EcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEec
Q 008112 338 TA-SDGAM-VARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (577)
Q Consensus 338 ~~-sDGIm-IaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs 415 (577)
.. +..++ .+.+.-|.--++. .+.|-+.+....+|+|..+- .+...|+..+...|+|+++..
T Consensus 141 ~~~~~~vli~~~~~~g~~~g~~-----~~~i~~~~~~~~~Pvia~~g------------~~~~~~~~~~~~~G~~~~~vg 203 (237)
T 3cwo_X 141 KRGAGEILLTSIDRDGTKSGYD-----TEMIRFVRPLTTLPIIASGG------------AGKMEHFLEAFLAGADAALAA 203 (237)
T ss_dssp HHTCSEEEEEETTTTTCCSCCC-----HHHHHHHGGGCCSCEEEESC------------CCSHHHHHHHHHHTCSEEEES
T ss_pred hcCCCeEEEEecCCCCcccccc-----HHHHHHHHHhcCCCEEecCC------------CCCHHHHHHHHHcCcHHHhhh
Confidence 43 33344 4443333333332 22333344556899987543 122345667777899999875
Q ss_pred cccCCCCCHH
Q 008112 416 GETAHGKFPL 425 (577)
Q Consensus 416 ~ETa~G~yP~ 425 (577)
.---.|.+..
T Consensus 204 ~a~~~~~~~~ 213 (237)
T 3cwo_X 204 SVFHFREIDV 213 (237)
T ss_dssp HHHHTTSSCH
T ss_pred HHHHcCCCCH
Confidence 3332344443
No 479
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=24.64 E-value=2e+02 Score=27.27 Aligned_cols=67 Identities=16% Similarity=0.228 Sum_probs=38.1
Q ss_pred HHHHHHHHHhcCCCceEEEeecChh-hHhhHHHHHHh-cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEe
Q 008112 304 VHELKNYLKSCGADIHVIVKIESAD-SIPNLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVAT 381 (577)
Q Consensus 304 v~~lr~~l~~~~~~i~IiaKIEt~~-gv~NldeIl~~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~AT 381 (577)
+..+.+.+.+.|.++.++.- .+.+ -.+.++.+++. +|||++.+.|.. .....++.++++|+|+++..
T Consensus 21 ~~gi~~~a~~~g~~~~~~~~-~~~~~~~~~i~~l~~~~vdgiii~~~~~~----------~~~~~~~~~~~~~iPvV~~~ 89 (306)
T 8abp_A 21 WKFADKAGKDLGFEVIKIAV-PDGEKTLNAIDSLAASGAKGFVICTPDPK----------LGSAIVAKARGYDMKVIAVD 89 (306)
T ss_dssp HHHHHHHHHHHTEEEEEEEC-CSHHHHHHHHHHHHHTTCCEEEEECSCGG----------GHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHHcCCEEEEeCC-CCHHHHHHHHHHHHHcCCCEEEEeCCCch----------hhHHHHHHHHHCCCcEEEeC
Confidence 33444555556655544332 2222 23445555544 899999754421 23345667888999998754
No 480
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=24.52 E-value=2.2e+02 Score=25.91 Aligned_cols=48 Identities=6% Similarity=0.158 Sum_probs=36.6
Q ss_pred CHHHHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHHHHHhcCCCeeEEEe
Q 008112 122 TREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIML 172 (577)
Q Consensus 122 ~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~ 172 (577)
..+.++.+.++|++.+-+.+...+.++..+.++.+++....++ +.+++
T Consensus 28 ~~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~~~---v~v~v 75 (215)
T 1xi3_A 28 EVESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREYD---ALFFV 75 (215)
T ss_dssp HHHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHHTT---CEEEE
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHcC---CeEEE
Confidence 3578999999999999888777788777888888887665544 44554
No 481
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=24.32 E-value=1e+02 Score=31.03 Aligned_cols=53 Identities=17% Similarity=0.156 Sum_probs=33.1
Q ss_pred CCCHHHHHHHH-HhCCcEEEEeccCCC------hHHHHHHHHHHHHHHHhcCCCeeEEEeecCC
Q 008112 120 TNTREMIWKLA-EAGMNVARLNMSHGD------HASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (577)
Q Consensus 120 ~~~~e~l~~li-~~Gm~v~RiN~sHg~------~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~G 176 (577)
..+.+.++.|. +.|+|++|+-+.+.. ++.+ +.++.+=+...+.| +-+++|+-+
T Consensus 68 ~~~~~~~~~l~~~~G~N~VRi~~~~~~~~~~~~~~~~-~~ld~~v~~a~~~G---i~VilD~H~ 127 (327)
T 3pzt_A 68 YVNKDSLKWLRDDWGITVFRAAMYTADGGYIDNPSVK-NKVKEAVEAAKELG---IYVIIDWHI 127 (327)
T ss_dssp GCSHHHHHHHHHHTCCSEEEEEEESSTTSTTTCGGGH-HHHHHHHHHHHHHT---CEEEEEEEC
T ss_pred CCCHHHHHHHHHhcCCCEEEEEeEECCCCcccCHHHH-HHHHHHHHHHHHCC---CEEEEEecc
Confidence 34677899886 689999999876532 2223 33333333344555 667888764
No 482
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=24.20 E-value=1e+02 Score=29.54 Aligned_cols=103 Identities=15% Similarity=0.172 Sum_probs=62.0
Q ss_pred CEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCCCccCCCCCCcHHHHHHHHHHH
Q 008112 291 DFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRT 369 (577)
Q Consensus 291 D~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGDLg~elg~e~v~~~qk~Ii~~ 369 (577)
..+..|| +.+.+.+++++. .++.+..-.+.. +.+.+-.. .+++-.. . .....-..+++.
T Consensus 132 ~v~~~Sf--~~~~l~~~~~~~----p~~~~~~l~~~~----~~~~~~~~~~~~~~~~---------~-~~~~~~~~~v~~ 191 (238)
T 3no3_A 132 RTDYISF--NMDACKEFIRLC----PKSEVSYLNGEL----SPMELKELGFTGLDYH---------Y-KVLQSHPDWVKD 191 (238)
T ss_dssp GEEEEES--CHHHHHHHHHHC----TTSCEEECSSCS----CHHHHHHTTCCEEEEE---------H-HHHHHSTTHHHH
T ss_pred CEEEEEC--CHHHHHHHHHHC----CCCeEEEEeCCC----CHHHHHHCCCceEecc---------H-HhhhCCHHHHHH
Confidence 3667787 677777776643 444444433332 11222111 3443321 0 112223578999
Q ss_pred HHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHH
Q 008112 370 CRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 433 (577)
Q Consensus 370 c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~ 433 (577)
|+++|++|.+=|- -+-.++..++..|+|+|+- +||..+.+++.+
T Consensus 192 ~~~~G~~v~~WTV-------------n~~~~~~~l~~~GVdgIiT-------D~P~~~~~~l~~ 235 (238)
T 3no3_A 192 CKVLGMTSNVWTV-------------DDPKLMEEMIDMGVDFITT-------DLPEETQKILHS 235 (238)
T ss_dssp HHHTTCEEEEECC-------------CSHHHHHHHHHHTCSEEEE-------SCHHHHHHHHHH
T ss_pred HHHCCCEEEEECC-------------CCHHHHHHHHHcCCCEEEC-------CCHHHHHHHHHh
Confidence 9999999998762 1234567788899999986 689888887654
No 483
>3ijd_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: C2F; 2.00A {Clostridium thermocellum atcc 27405}
Probab=24.17 E-value=1.1e+02 Score=31.25 Aligned_cols=101 Identities=12% Similarity=0.164 Sum_probs=64.7
Q ss_pred ccCHHHHHHHHhcCCCEEEEcCCCCHHHHHHHH----HHHHhcCC-CceEEEeecChhhHhhHHHHHHhcCEEEEc----
Q 008112 276 EKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELK----NYLKSCGA-DIHVIVKIESADSIPNLHSIITASDGAMVA---- 346 (577)
Q Consensus 276 ekD~~dI~~al~~gvD~I~~SfV~sa~dv~~lr----~~l~~~~~-~i~IiaKIEt~~gv~NldeIl~~sDGImIa---- 346 (577)
+.|.+.++.-+++|+||++--++=+.+....++ +.+...|- +++|++-|==.....++.- +.. -|+-|.
T Consensus 165 ~~d~~~Lk~KvdAGAdf~ITQ~ffD~e~~~~f~~~~~~~~r~~Gi~~vPIipGImPi~s~k~~~f-~~~-~G~~IP~~l~ 242 (315)
T 3ijd_A 165 TDEHLRIIDKINKGCKYFITQAVYNVEAAKDFLSDYYYYSKNNNLKMVPIIFTLTPCGSTKTLEF-MKW-LGISIPRWLE 242 (315)
T ss_dssp SCHHHHHHHHHHTTCCEEEESCCCCHHHHHHHHHHHHHHHHHTTBCCCCEEEEECCCCSHHHHHH-HHH-HTCCCCHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEccccCCHHHHHHHHHHHHHHHHHCCCCCCcEEEEeeecCCHHHHHH-Hhc-CCCCCCHHHH
Confidence 357888888899999999999999999999988 45566777 7889887543333444321 111 111111
Q ss_pred -----CCCccCCCCCCcHHHHHHHHHHHHHHcCCceEE
Q 008112 347 -----RGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIV 379 (577)
Q Consensus 347 -----RGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ 379 (577)
-.| ..+.|++-....-++++..|.-.|.|+++
T Consensus 243 ~~l~~~~d-~~~~Gi~~a~e~~~~L~~~~~g~~~p~G~ 279 (315)
T 3ijd_A 243 NDLMNCED-ILNKSVSLSKSIFNELMEFCLEKGIPIGC 279 (315)
T ss_dssp HHHHTTCC-CHHHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHhCCC-HHHHHHHHHHHHHHHHHHhcCcCCcCCCc
Confidence 012 12233333333446677888888899886
No 484
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=24.10 E-value=4e+02 Score=24.11 Aligned_cols=121 Identities=18% Similarity=0.169 Sum_probs=63.0
Q ss_pred cCCCEEEEcC----CCCHHHHHHHHHHHHhcCCCceEE--EeecC-hhhHhhHHHHHHh-cCEEEEcCCCccCCCCCCcH
Q 008112 288 NKVDFYAVSF----VKDAQVVHELKNYLKSCGADIHVI--VKIES-ADSIPNLHSIITA-SDGAMVARGDLGAELPIEEV 359 (577)
Q Consensus 288 ~gvD~I~~Sf----V~sa~dv~~lr~~l~~~~~~i~Ii--aKIEt-~~gv~NldeIl~~-sDGImIaRGDLg~elg~e~v 359 (577)
.|+|+|=+.+ -.-.+.++++++. -.+..++ .|+.+ ++- -++..++. +|++.+-.+ .+
T Consensus 24 ~~v~~iev~~~~~~~~g~~~i~~l~~~----~~~~~i~~~l~~~di~~~--~~~~a~~~Gad~v~vh~~-----~~---- 88 (207)
T 3ajx_A 24 EYVDIIELGTPLIKAEGLSVITAVKKA----HPDKIVFADMKTMDAGEL--EADIAFKAGADLVTVLGS-----AD---- 88 (207)
T ss_dssp GGCSEEEECHHHHHHHCTHHHHHHHHH----STTSEEEEEEEECSCHHH--HHHHHHHTTCSEEEEETT-----SC----
T ss_pred ccCCEEEECcHHHHhhCHHHHHHHHHh----CCCCeEEEEEEecCccHH--HHHHHHhCCCCEEEEecc-----CC----
Confidence 3788865533 1223344445443 1244555 58876 222 24555555 899987311 11
Q ss_pred HHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCC-ChHhHHHHHHHHHhccceE-EeccccC--CCCCHHHHHHHHHHHH
Q 008112 360 PLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTP-TRAEVSDIAIAVREGADAV-MLSGETA--HGKFPLKAVKVMHTVS 435 (577)
Q Consensus 360 ~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~P-trAEv~Dv~nav~~G~D~i-mLs~ETa--~G~yP~eaV~~m~~I~ 435 (577)
...-+.+++.|+++|++++++. . .| +..| .+..+...|+|.+ +.-+-++ .|..|.+ +.++.++
T Consensus 89 ~~~~~~~~~~~~~~g~~~gv~~------~---s~~~p~~--~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~--~~i~~~~ 155 (207)
T 3ajx_A 89 DSTIAGAVKAAQAHNKGVVVDL------I---GIEDKAT--RAQEVRALGAKFVEMHAGLDEQAKPGFDLN--GLLAAGE 155 (207)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEC------T---TCSSHHH--HHHHHHHTTCSEEEEECCHHHHTSTTCCTH--HHHHHHH
T ss_pred hHHHHHHHHHHHHcCCceEEEE------e---cCCChHH--HHHHHHHhCCCEEEEEecccccccCCCchH--HHHHHhh
Confidence 1234467788888899976532 1 12 2333 1222334589998 6544432 4555554 5555554
Q ss_pred H
Q 008112 436 L 436 (577)
Q Consensus 436 ~ 436 (577)
.
T Consensus 156 ~ 156 (207)
T 3ajx_A 156 K 156 (207)
T ss_dssp H
T ss_pred C
Confidence 4
No 485
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=24.09 E-value=1.1e+02 Score=28.77 Aligned_cols=122 Identities=12% Similarity=0.112 Sum_probs=71.5
Q ss_pred HHHHHHHhcCCCEEEEcCCC-CHHHHHHHHHHHHhcCCCceEEE---eecC------hhhHhhHHHHHHh-----cCEEE
Q 008112 280 DDIKFGVDNKVDFYAVSFVK-DAQVVHELKNYLKSCGADIHVIV---KIES------ADSIPNLHSIITA-----SDGAM 344 (577)
Q Consensus 280 ~dI~~al~~gvD~I~~SfV~-sa~dv~~lr~~l~~~~~~i~Iia---KIEt------~~gv~NldeIl~~-----sDGIm 344 (577)
+.++.+.+.|+|+|=+..-. +..++.++++.+++.|-.+..+. .+-+ .++++.+...++. ++.|.
T Consensus 22 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~ 101 (275)
T 3qc0_A 22 EAVDICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAELGADCLV 101 (275)
T ss_dssp HHHHHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTTCSCEE
T ss_pred HHHHHHHHcCCCEEEeccccccccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 55778889999999875421 35678889999988776543232 1221 1345555555554 56676
Q ss_pred EcCCCccC-CCC----CCcHHHHHHHHHHHHHHcCCceEEEehhhHhh------hcCCCCChHhHHHHHHHHH
Q 008112 345 VARGDLGA-ELP----IEEVPLLQEEIIRTCRSMGKAVIVATNMLESM------IVHPTPTRAEVSDIAIAVR 406 (577)
Q Consensus 345 IaRGDLg~-elg----~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM------~~~~~PtrAEv~Dv~nav~ 406 (577)
+..|...- ..+ ++.+...-+++...|.++|..+.+ |.| -.+...|..++.++...+.
T Consensus 102 ~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l-----E~~~~~~~~~~~~~~~~~~~~~l~~~~~ 169 (275)
T 3qc0_A 102 LVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAI-----EPLHPMYAADRACVNTLGQALDICETLG 169 (275)
T ss_dssp EECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEE-----CCCCGGGTTTTBSCCCHHHHHHHHHHHC
T ss_pred EeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEE-----eECCCcccCCccccCCHHHHHHHHHHhC
Confidence 66554321 111 123445556777788888887664 222 1223456666666665553
No 486
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=23.92 E-value=78 Score=32.52 Aligned_cols=62 Identities=10% Similarity=0.100 Sum_probs=45.7
Q ss_pred CHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEeecChhh--HhhHHHHHHh-cCEEEEcC
Q 008112 278 DWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADS--IPNLHSIITA-SDGAMVAR 347 (577)
Q Consensus 278 D~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~g--v~NldeIl~~-sDGImIaR 347 (577)
..+.++.+++.|+|+|.+-.. ++++++++++.+. .++.|.+ --| .+|+.++++. +|+|-+|.
T Consensus 240 tldea~eAl~aGaD~I~LDn~-~~~~l~~av~~l~---~~v~iea----SGGIt~~~I~~~a~tGVD~isvGa 304 (320)
T 3paj_A 240 TLAELEEAISAGADIIMLDNF-SLEMMREAVKINA---GRAALEN----SGNITLDNLKECAETGVDYISVGA 304 (320)
T ss_dssp SHHHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHT---TSSEEEE----ESSCCHHHHHHHHTTTCSEEECTH
T ss_pred CHHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhC---CCCeEEE----ECCCCHHHHHHHHHcCCCEEEECc
Confidence 356778899999999999874 7888888887763 4444443 233 4588888877 99998873
No 487
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=23.79 E-value=1.1e+02 Score=30.51 Aligned_cols=23 Identities=22% Similarity=0.224 Sum_probs=20.2
Q ss_pred CCCHHHHHHHHHhCCcEEEEecc
Q 008112 120 TNTREMIWKLAEAGMNVARLNMS 142 (577)
Q Consensus 120 ~~~~e~l~~li~~Gm~v~RiN~s 142 (577)
....+.++.|.+.|+|++||-++
T Consensus 36 ~~~~~d~~~i~~~G~n~vRi~i~ 58 (341)
T 1vjz_A 36 NFKEEDFLWMAQWDFNFVRIPMC 58 (341)
T ss_dssp CCCHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCHHHHHHHHHcCCCEEEeeCC
Confidence 45788999999999999999864
No 488
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=23.73 E-value=3.5e+02 Score=32.13 Aligned_cols=125 Identities=21% Similarity=0.163 Sum_probs=82.1
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcC-------------------------------CCceEEEeecCh
Q 008112 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCG-------------------------------ADIHVIVKIESA 327 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~-------------------------------~~i~IiaKIEt~ 327 (577)
.+.++.|.+.|.+.|++.=-.+...+.++.+.....| ....++.--++.
T Consensus 135 ~eLv~~A~~~G~~aiAITDH~~~~G~~~~~~~a~~~gIk~I~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~hlvlLAkN~ 214 (1041)
T 3f2b_A 135 TKLIEQAKKWGHPAIAVTDHAVVQSFPEAYSAAKKHGMKVIYGLEANIVDDGVPIAYNETHRRLGSGSGPFHVTLLAQNE 214 (1041)
T ss_dssp HHHHHHHHHTTCSCEEECCBSCCTTHHHHHHHHHHHTCCEEEEEEEEEECC------------------CEEEEEEECSH
T ss_pred HHHHHHHHHCCCCEEEEecccchhhHHHHHHHHHHCCCEEEEEEEEEEEeCCcccccccccccccccCCCceEEEEeCCH
Confidence 3556789999999999986666666655554443211 012466666789
Q ss_pred hhHhhHHHHHHh--------------------cCEEEEcCCCccCCCCC-------------------------------
Q 008112 328 DSIPNLHSIITA--------------------SDGAMVARGDLGAELPI------------------------------- 356 (577)
Q Consensus 328 ~gv~NldeIl~~--------------------sDGImIaRGDLg~elg~------------------------------- 356 (577)
+|..||-.++.. .+|++++.|-+.-++.-
T Consensus 215 ~Gy~nL~kLvS~a~~~~~~~~pri~~~~L~~~~egLi~~s~c~~Gev~~~l~~~~~~~a~~~~~~y~ylei~~~~~~~~l 294 (1041)
T 3f2b_A 215 TGLKNLFKLVSLSHIQYFHRVPRIPRSVLVKHRDGLLVGSGCDKGELFDNLIQKAPEEVEDIARFYDFLEVHPPDVYKPL 294 (1041)
T ss_dssp HHHHHHHHHHHHHHTTTCSSSCCEEHHHHHHTCTTEEEECCSSSSSSTTC--------CCTTGGGCSBEEECCGGGGCCC
T ss_pred HHHHHHHHHHHHHHHhcccCCCCcCHHHHHhccCCeEEEcCccccHHHHHHhcCCHHHHHHHHHHhhHHHhcCccccHHH
Confidence 999999888763 36788876544322210
Q ss_pred ---------CcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhc
Q 008112 357 ---------EEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREG 408 (577)
Q Consensus 357 ---------e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G 408 (577)
++...+.+.+++.+++.|+|++ ||+-. +-..|.+++..|+..+...|
T Consensus 295 ~~~~~~~~~~~~~~~~~~l~~la~~~~~p~V-AT~dv----hy~~~ed~~~~dvL~~~~~~ 350 (1041)
T 3f2b_A 295 IEMDYVKDEEMIKNIIRSIVALGEKLDIPVV-ATGNV----HYLNPEDKIYRKILIHSQGG 350 (1041)
T ss_dssp ----CCSCHHHHHHHHHHHHHHHHHTTCCEE-ECCCB----SBSSGGGHHHHHHHHHTTGG
T ss_pred HhccCCCcHHHHHHHHHHHHHHHHHcCCCEE-EeCCc----eecCHhhHHHHHHHHhhccc
Confidence 0112345788999999999976 56432 44578889988888765544
No 489
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=23.64 E-value=2.3e+02 Score=28.03 Aligned_cols=83 Identities=19% Similarity=0.231 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCe---eEEEeec----------CCCeeEEeecC--CcEEEcCCCEE---------------
Q 008112 147 ASHQKVIDLVKEYNAQSKDNV---IAIMLDT----------KGPEVRSGDLP--QPITLTSGQEF--------------- 196 (577)
Q Consensus 147 e~~~~~i~~ir~~~~~~~~~~---i~I~~Dl----------~GpkiR~g~~~--~~i~L~~G~~v--------------- 196 (577)
.+.++-+..+|+-.+.+. .| ++.+++. .||+.|+.-.+ ..-.|++|+.|
T Consensus 78 k~ar~El~~LkeElerL~-sPPL~iGtvlev~dd~~aiV~s~Gr~~~V~Vsp~Vd~e~LkPG~rVaLNeSlaVVevLp~E 156 (251)
T 3m9b_A 78 KEARQQLLALREEVDRLG-QPPSGYGVLLATHDDDTVDVFTSGRKMRLTCSPNIDAASLKKGQTVRLNEALTVVEAGTFE 156 (251)
T ss_dssp HHHHHHHHHHHHHHHHHH-SCCEEEEEEEEECSSSCEEEECSSSCCEECBCTTSCTTTSCSSCEEEECTTCCBCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHhc-CCCceEEEEEEEcCCCEEEEEeCCceEEEEeCCCCCHHHCCCCCEEEeCCccEEEEecCCC
Q ss_pred ----------------EEEEecCCCCceEEecccccccc-----------------ccCCCCEEEEe
Q 008112 197 ----------------TFTIQRGVGSAECVSVNYDDFVN-----------------DVEVGDMLLVD 230 (577)
Q Consensus 197 ----------------~lt~~~~~~~~~~i~v~~~~~~~-----------------~v~~Gd~I~id 230 (577)
+.-.-...+.+..+++..+-.-. .+++||.|++|
T Consensus 157 ~~Gev~tv~E~l~d~~R~lV~~~~~eerVv~lA~~L~~~~~~~~~~~~~~~~~~~~~lr~GDsllvD 223 (251)
T 3m9b_A 157 AVGEISTLREILADGHRALVVGHADEERVVWLADPLIAEDLPDGLPEALNDDTRPRKLRPGDSLLVD 223 (251)
T ss_dssp CCSEEEEEEEECTTSSEEEEECSSSCEEEEECCGGGTCSCCCCCCCSSSCCCCSCCCCCTTCEEEEC
T ss_pred CcccEEEEEEEecCCCEEEEecCCCceEEEEechhhhccccccccccccccccccCCCCCCCEEEEe
No 490
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=23.61 E-value=3.4e+02 Score=26.93 Aligned_cols=95 Identities=18% Similarity=0.117 Sum_probs=52.5
Q ss_pred HHHHHh-cCEEEEcCCCc--cCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHH-HHHhcc
Q 008112 334 HSIITA-SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGA 409 (577)
Q Consensus 334 deIl~~-sDGImIaRGDL--g~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~n-av~~G~ 409 (577)
+-.++. +||+++. |=- +..+..++-..+-+..++.++ -..|||.-+. ..+-+|..+.+. |-..|+
T Consensus 28 ~~li~~Gv~gi~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg---------~~~t~~ai~la~~A~~~Ga 96 (297)
T 2rfg_A 28 DWQIKHGAHGLVPV-GTTGESPTLTEEEHKRVVALVAEQAQ-GRVPVIAGAG---------SNNPVEAVRYAQHAQQAGA 96 (297)
T ss_dssp HHHHHTTCSEEECS-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCBEEECC---------CSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEccC---------CCCHHHHHHHHHHHHhcCC
Confidence 334444 8999874 211 122333333333334443332 2478886543 334456555554 666799
Q ss_pred ceEEeccccCCCCCHHHHHHHHHHHHHHHh
Q 008112 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (577)
Q Consensus 410 D~imLs~ETa~G~yP~eaV~~m~~I~~~aE 439 (577)
|++|+..=--...-+.+.++....|+..+.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (297)
T 2rfg_A 97 DAVLCVAGYYNRPSQEGLYQHFKMVHDAID 126 (297)
T ss_dssp SEEEECCCTTTCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999996332222234667788888887664
No 491
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=23.57 E-value=5.2e+02 Score=25.20 Aligned_cols=112 Identities=14% Similarity=0.181 Sum_probs=77.2
Q ss_pred cCHHHHHHHHhcCCCEEEEc-----CCCCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCCCc
Q 008112 277 KDWDDIKFGVDNKVDFYAVS-----FVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDL 350 (577)
Q Consensus 277 kD~~dI~~al~~gvD~I~~S-----fV~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGDL 350 (577)
.|...+..+.+.|+..|.+= |-.+.+|+.++|+.. +++|+.|==-.... .+.+.... +|+|.+--.
T Consensus 61 ~~~~~iA~~y~~~A~~IsVlTd~~~F~gs~~dL~~ir~~v-----~lPvLrKDfi~~~~-qi~ea~~~GAD~ilLi~a-- 132 (251)
T 1i4n_A 61 ASLEDFIRMYDELADAISILTEKHYFKGDPAFVRAARNLT-----CRPILAKDFYIDTV-QVKLASSVGADAILIIAR-- 132 (251)
T ss_dssp CCHHHHHHHHHHHCSEEEEECCCSSSCCCTHHHHHHHTTC-----CSCEEEECCCCSTH-HHHHHHHTTCSEEEEEGG--
T ss_pred CCHHHHHHHHHHhCCceEEEecccccCCCHHHHHHHHHhC-----CCCEEEeeCCCCHH-HHHHHHHcCCCEEEEecc--
Confidence 47777777766668888774 778999999998743 68888872112333 35554444 998887322
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHh-ccceEEecc
Q 008112 351 GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVRE-GADAVMLSG 416 (577)
Q Consensus 351 g~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~-G~D~imLs~ 416 (577)
-++. .-.+.++..|++.|.-+++-++ +.+| +..+... |+|.|-.+.
T Consensus 133 --~l~~----~~l~~l~~~a~~lGl~~lvEv~-----------~~eE---~~~A~~l~g~~iIGinn 179 (251)
T 1i4n_A 133 --ILTA----EQIKEIYEAAEELGMDSLVEVH-----------SRED---LEKVFSVIRPKIIGINT 179 (251)
T ss_dssp --GSCH----HHHHHHHHHHHTTTCEEEEEEC-----------SHHH---HHHHHTTCCCSEEEEEC
T ss_pred --cCCH----HHHHHHHHHHHHcCCeEEEEeC-----------CHHH---HHHHHhcCCCCEEEEeC
Confidence 1221 3457788999999999998655 3444 5677888 999988764
No 492
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=23.53 E-value=2.2e+02 Score=29.08 Aligned_cols=23 Identities=4% Similarity=0.140 Sum_probs=18.6
Q ss_pred CCCccCHHHH--------HHHHhcCCCEEEE
Q 008112 273 SITEKDWDDI--------KFGVDNKVDFYAV 295 (577)
Q Consensus 273 ~ltekD~~dI--------~~al~~gvD~I~~ 295 (577)
.||..|++.| ++|.+.|+|+|=+
T Consensus 141 ~mt~~eI~~ii~~F~~AA~rA~~AGFDgVEI 171 (358)
T 4a3u_A 141 ALRLDEIPRLLDDYEKAARHALKAGFDGVQI 171 (358)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCeEee
Confidence 5788888877 4667899999976
No 493
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=23.38 E-value=2.1e+02 Score=26.64 Aligned_cols=98 Identities=10% Similarity=-0.006 Sum_probs=55.9
Q ss_pred HHHHHHHHhcCCCEEEEcCCC-CHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh-cCEEEEcCCCccCCCCC
Q 008112 279 WDDIKFGVDNKVDFYAVSFVK-DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPI 356 (577)
Q Consensus 279 ~~dI~~al~~gvD~I~~SfV~-sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDGImIaRGDLg~elg~ 356 (577)
.+.++.+++.|+++|-+-.=. +.+++.++-+.+.. .....++.- ++.+--.+. +|||-++..|+....
T Consensus 16 ~~~~~~a~~~Gv~~v~lr~k~~~~~~~~~~i~~l~~-~~~~~livn-------d~~~~A~~~gadgvhl~~~~~~~~~-- 85 (210)
T 3ceu_A 16 DKIITALFEEGLDILHLRKPETPAMYSERLLTLIPE-KYHRRIVTH-------EHFYLKEEFNLMGIHLNARNPSEPH-- 85 (210)
T ss_dssp HHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCG-GGGGGEEES-------SCTTHHHHTTCSEEECCSSSCSCCT--
T ss_pred HHHHHHHHHCCCCEEEEccCCCCHHHHHHHHHHHHH-HhCCeEEEe-------CCHHHHHHcCCCEEEECcccccccc--
Confidence 578889999999999887421 23443333221211 123445542 233333334 899998877773211
Q ss_pred CcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEecc
Q 008112 357 EEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG 416 (577)
Q Consensus 357 e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ 416 (577)
..++.++..+. |..| +..|. .|+|.+.++.
T Consensus 86 ---------------~~~~~ig~s~~-----------t~~e---~~~A~-~GaDyv~~g~ 115 (210)
T 3ceu_A 86 ---------------DYAGHVSCSCH-----------SVEE---VKNRK-HFYDYVFMSP 115 (210)
T ss_dssp ---------------TCCSEEEEEEC-----------SHHH---HHTTG-GGSSEEEECC
T ss_pred ---------------ccCCEEEEecC-----------CHHH---HHHHh-hCCCEEEECC
Confidence 12666666543 3344 44555 8999999863
No 494
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=23.25 E-value=1.3e+02 Score=30.36 Aligned_cols=86 Identities=15% Similarity=0.102 Sum_probs=56.0
Q ss_pred hHhhHHHHHHh--cCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCC-CCChHhHHHHHHHH
Q 008112 329 SIPNLHSIITA--SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHP-TPTRAEVSDIAIAV 405 (577)
Q Consensus 329 gv~NldeIl~~--sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~-~PtrAEv~Dv~nav 405 (577)
...+++++++. .|.|+|+ .| ......++.+|-++||+|++ ++| ..+.+|...+..+.
T Consensus 76 ~~~~~~~ll~~~~vD~V~I~-------tp----~~~H~~~~~~al~aGkhVl~---------EKPla~~~~ea~~l~~~a 135 (361)
T 3u3x_A 76 RIATAEEILEDENIGLIVSA-------AV----SSERAELAIRAMQHGKDVLV---------DKPGMTSFDQLAKLRRVQ 135 (361)
T ss_dssp EESCHHHHHTCTTCCEEEEC-------CC----HHHHHHHHHHHHHTTCEEEE---------ESCSCSSHHHHHHHHHHH
T ss_pred ccCCHHHHhcCCCCCEEEEe-------CC----hHHHHHHHHHHHHCCCeEEE---------eCCCCCCHHHHHHHHHHH
Confidence 45789999975 8999996 33 24556788899999999997 445 57888888888876
Q ss_pred HhccceEEeccccCCCCCHHHHHHHHHHHHHH
Q 008112 406 REGADAVMLSGETAHGKFPLKAVKVMHTVSLR 437 (577)
Q Consensus 406 ~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~ 437 (577)
..- ...+.-+..---.+| .++.+++++.+
T Consensus 136 ~~~-g~~l~v~~~~R~~~p--~~~~~k~~i~~ 164 (361)
T 3u3x_A 136 AET-GRIFSILYSEHFESP--ATVKAGELVAA 164 (361)
T ss_dssp HTT-CCCEEEECHHHHTCH--HHHHHHHHHHT
T ss_pred HHc-CCEEEEechHhhCCH--HHHHHHHHHHc
Confidence 642 222221111111124 56667777654
No 495
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=23.24 E-value=1.1e+02 Score=31.05 Aligned_cols=42 Identities=19% Similarity=0.227 Sum_probs=34.2
Q ss_pred CCCHHHHHHHHHhCC-------------cEEEEeccCCChHHHHHHHHHHHHHHH
Q 008112 120 TNTREMIWKLAEAGM-------------NVARLNMSHGDHASHQKVIDLVKEYNA 161 (577)
Q Consensus 120 ~~~~e~l~~li~~Gm-------------~v~RiN~sHg~~e~~~~~i~~ir~~~~ 161 (577)
....+..+.|.+.|+ +.+||+|++-+.++..+.++.++++.+
T Consensus 381 ~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~ 435 (437)
T 3g0t_A 381 MDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLNA 435 (437)
T ss_dssp CCHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 345667777888875 679999998899999999999988764
No 496
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=23.18 E-value=3.7e+02 Score=24.95 Aligned_cols=66 Identities=12% Similarity=0.059 Sum_probs=36.2
Q ss_pred HHHHHHHHHhcCCCceEEEeecChhh-HhhHHHHHH-hcCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEe
Q 008112 304 VHELKNYLKSCGADIHVIVKIESADS-IPNLHSIIT-ASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVAT 381 (577)
Q Consensus 304 v~~lr~~l~~~~~~i~IiaKIEt~~g-v~NldeIl~-~sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~AT 381 (577)
+..+.+.+.+.|.++.+..-=++.+. .+.++.+.. -+|||++...+. ...+..+.+.|+|+++.-
T Consensus 26 ~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~-------------~~~~~~l~~~~iPvV~i~ 92 (276)
T 3jy6_A 26 FKGISSILESRGYIGVLFDANADIEREKTLLRAIGSRGFDGLILQSFSN-------------PQTVQEILHQQMPVVSVD 92 (276)
T ss_dssp HHHHHHHHHTTTCEEEEEECTTCHHHHHHHHHHHHTTTCSEEEEESSCC-------------HHHHHHHHTTSSCEEEES
T ss_pred HHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCc-------------HHHHHHHHHCCCCEEEEe
Confidence 34444555555655544332222221 123344443 389999975442 346677788999988754
Q ss_pred h
Q 008112 382 N 382 (577)
Q Consensus 382 q 382 (577)
.
T Consensus 93 ~ 93 (276)
T 3jy6_A 93 R 93 (276)
T ss_dssp C
T ss_pred c
Confidence 3
No 497
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=23.15 E-value=1.7e+02 Score=28.26 Aligned_cols=46 Identities=20% Similarity=0.330 Sum_probs=31.1
Q ss_pred HHHHHHhcCEEEEcCCC------ccCCCCCC-------cHHHHHHHHHHHHHHcCCceEE
Q 008112 333 LHSIITASDGAMVARGD------LGAELPIE-------EVPLLQEEIIRTCRSMGKAVIV 379 (577)
Q Consensus 333 ldeIl~~sDGImIaRGD------Lg~elg~e-------~v~~~qk~Ii~~c~~aGKPvi~ 379 (577)
++++++..||+++.-|. ++-+ +.+ .-......+++.+.+.+||++-
T Consensus 55 ~~~~l~~~DGlil~GG~~v~P~~yg~~-~~~~~~~~~~~rd~~~~~lir~a~~~~~PiLG 113 (254)
T 3fij_A 55 AVQAISLVDGLLLTGGQDITPQLYLEE-PSQEIGAYFPPRDSYEIALVRAALDAGKPIFA 113 (254)
T ss_dssp HHHHHHTCSEEEECCCSCCCGGGGTCC-CCTTCCCCCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHhhCCEEEECCCCCCChhhcCCc-cCcccCCcChhhhHHHHHHHHHHHHcCCCEEE
Confidence 77788889999999772 1111 111 1224456788999999999854
No 498
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=23.11 E-value=1.5e+02 Score=30.49 Aligned_cols=63 Identities=10% Similarity=0.098 Sum_probs=40.3
Q ss_pred HHHHHhcCCCEEEEcCC-------CCHHHHHHHHHHHHhcCCCceEEEeecChhhHhhHHHHHHh--cCEEEEcCCCcc
Q 008112 282 IKFGVDNKVDFYAVSFV-------KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGAMVARGDLG 351 (577)
Q Consensus 282 I~~al~~gvD~I~~SfV-------~sa~dv~~lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~--sDGImIaRGDLg 351 (577)
++...+.|+|+|.++-= ...+-+.++++.+ ++.||+- ... ..++.+++++. +|+|++||+=|+
T Consensus 257 a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~-----~iPvi~~-Ggi-t~~~a~~~l~~g~aD~V~~gR~~l~ 328 (364)
T 1vyr_A 257 IEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERF-----HGVIIGA-GAY-TAEKAEDLIGKGLIDAVAFGRDYIA 328 (364)
T ss_dssp HHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHC-----CSEEEEE-SSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHC-----CCCEEEE-CCc-CHHHHHHHHHCCCccEEEECHHHHh
Confidence 34455789999998731 1233344455433 4666662 332 36778888876 899999998665
No 499
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=23.06 E-value=1.2e+02 Score=31.35 Aligned_cols=62 Identities=16% Similarity=0.176 Sum_probs=42.2
Q ss_pred CcEEEEecCCCCC-CHH----HHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHHHHHhcCCCeeEEEeec
Q 008112 109 KTKIVCTIGPSTN-TRE----MIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDT 174 (577)
Q Consensus 109 ~tKIi~TiGPs~~-~~e----~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl 174 (577)
+....+|+|.... +++ ..+++.++|.+.+.+.+.|++.+.-.+.++.||++. + ..+.|++|.
T Consensus 148 ~vp~y~~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~av---g-~d~~l~vDa 214 (393)
T 2og9_A 148 SVRCYNTSGGFLHTPIDQLMVNASASIERGIGGIKLKVGQPDGALDIARVTAVRKHL---G-DAVPLMVDA 214 (393)
T ss_dssp EEEEEBCTTCCTTSCHHHHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHHHHHHHHH---C-TTSCEEEEC
T ss_pred ceEEEEECCCcCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHc---C-CCCEEEEEC
Confidence 4556666644322 454 356678899999999999988877778888888653 3 334566664
No 500
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=23.01 E-value=1.2e+02 Score=30.74 Aligned_cols=52 Identities=25% Similarity=0.356 Sum_probs=38.5
Q ss_pred HHHHHHHhCCcEEEEec-cC--CC-----hHHHHHHHHHHHHHHHhcCCCeeEEEeecCCCee
Q 008112 125 MIWKLAEAGMNVARLNM-SH--GD-----HASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEV 179 (577)
Q Consensus 125 ~l~~li~~Gm~v~RiN~-sH--g~-----~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~Gpki 179 (577)
..++|+++|+++.=||. |- |. .|++.+++..|+.+.++.+ +.|.+|+.=|++
T Consensus 38 ~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~---vpiSIDT~~~~V 97 (314)
T 2vef_A 38 QARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESD---VLISIDTWKSQV 97 (314)
T ss_dssp HHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCC---CEEEEECSCHHH
T ss_pred HHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCC---ceEEEeCCCHHH
Confidence 35779999999999998 42 22 3889999999888876654 667888765544
Done!