BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008121
(577 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 100/173 (57%), Gaps = 1/173 (0%)
Query: 400 YTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAV 459
+++ LQ A+++FS + ++G G G+VY+ A+G ++AVK++ E F V
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQ-GGELQFQTEV 86
Query: 460 SNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL 519
+S H N++ L G+C +RLLVY Y+ NG++ L +S L W R R+AL
Sbjct: 87 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 146
Query: 520 GTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572
G+AR L YLH+ C P ++HR+ K+ANILLD+E + D GLA L + V
Sbjct: 147 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHV 199
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 100/173 (57%), Gaps = 1/173 (0%)
Query: 400 YTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAV 459
+++ LQ A+++F + ++G G G+VY+ A+G ++AVK++ + E F V
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEER-TQGGELQFQTEV 78
Query: 460 SNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL 519
+S H N++ L G+C +RLLVY Y+ NG++ L +S L W R R+AL
Sbjct: 79 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 138
Query: 520 GTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572
G+AR L YLH+ C P ++HR+ K+ANILLD+E + D GLA L + V
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHV 191
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 100/169 (59%), Gaps = 5/169 (2%)
Query: 394 PITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEED 453
P + + L+ ATN+F +FLIG G G+VY+ +G +A+K+ S Q +
Sbjct: 23 PFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR--RTPESSQGIE 80
Query: 454 NFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNA 513
F + +S RHP++V+L G+C E + +L+Y+Y+ NGNL L+ +D + +++W
Sbjct: 81 EFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQ 140
Query: 514 RVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
R+ + +G AR L YLH +++HR+ KS NILLD+ P ++D G++
Sbjct: 141 RLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGIS 186
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 100/169 (59%), Gaps = 5/169 (2%)
Query: 394 PITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEED 453
P + + L+ ATN+F +FLIG G G+VY+ +G +A+K+ S Q +
Sbjct: 23 PFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR--RTPESSQGIE 80
Query: 454 NFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNA 513
F + +S RHP++V+L G+C E + +L+Y+Y+ NGNL L+ +D + +++W
Sbjct: 81 EFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQ 140
Query: 514 RVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
R+ + +G AR L YLH +++HR+ KS NILLD+ P ++D G++
Sbjct: 141 RLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGIS 186
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 99/191 (51%), Gaps = 17/191 (8%)
Query: 399 SYTVASLQTATNSFSQEFL------IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEE 452
S++ L+ TN+F + + +GEG G VY+ + N +AVKK+ EE
Sbjct: 8 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEE 66
Query: 453 --DNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510
F + + M++ +H N+V L G+ ++ LVY Y+ NG+L D L D + L+
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPPLS 125
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570
W+ R ++A G A + +LHE +HR+ KSANILLD+ +SD GLA + +
Sbjct: 126 WHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 182
Query: 571 QV----ITGTS 577
V I GT+
Sbjct: 183 XVMXXRIVGTT 193
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 92/172 (53%), Gaps = 13/172 (7%)
Query: 399 SYTVASLQTATNSFSQEFL------IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEE 452
S++ L+ TN+F + + +GEG G VY+ + N +AVKK+ EE
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEE 72
Query: 453 --DNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510
F + + M++ +H N+V L G+ ++ LVY Y+ NG+L D L D + L+
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPPLS 131
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
W+ R ++A G A + +LHE +HR+ KSANILLD+ +SD GLA
Sbjct: 132 WHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLA 180
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 92/172 (53%), Gaps = 13/172 (7%)
Query: 399 SYTVASLQTATNSFSQEFL------IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEE 452
S++ L+ TN+F + + +GEG G VY+ + N +AVKK+ EE
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEE 72
Query: 453 --DNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510
F + + M++ +H N+V L G+ ++ LVY Y+ NG+L D L D + L+
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPPLS 131
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
W+ R ++A G A + +LHE +HR+ KSANILLD+ +SD GLA
Sbjct: 132 WHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLA 180
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 82/151 (54%), Gaps = 3/151 (1%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
IG GS G V+RAE+ +G +AVK + + + FL V+ M RLRHPNIV G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ +V EY+ G+L+ +LH + + L R+ +A A+ + YLH P +V
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLH-KSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIV 161
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNT 568
HRN KS N+L+D + + D GL+ L +T
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKAST 192
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 96/191 (50%), Gaps = 17/191 (8%)
Query: 399 SYTVASLQTATNSFSQEFL------IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEE 452
S++ L+ TN+F + + GEG G VY+ + N +AVKK+ EE
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEE 63
Query: 453 --DNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510
F + + ++ +H N+V L G+ ++ LVY Y NG+L D L D + L+
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLD-GTPPLS 122
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570
W+ R ++A G A + +LHE +HR+ KSANILLD+ +SD GLA + +
Sbjct: 123 WHXRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 571 QV----ITGTS 577
V I GT+
Sbjct: 180 XVXXSRIVGTT 190
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 80/147 (54%), Gaps = 3/147 (2%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
IG GS G V+RAE+ +G +AVK + + + FL V+ M RLRHPNIV G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ +V EY+ G+L+ +LH + + L R+ +A A+ + YLH P +V
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLH-KSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIV 161
Query: 538 HRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ KS N+L+D + + D GL+ L
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRL 188
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNI 470
+F QE IG G G V+ + N +A+K I ++S ED+F+E M +L HP +
Sbjct: 30 TFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMS---EDDFIEEAEVMMKLSHPKL 84
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLH-----FADDSSKNLTWNARVRVALGTARAL 525
V L G C E LV+E++ +G L D L FA ++ + L +
Sbjct: 85 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGM--------CLDVCEGM 136
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGTS 577
YL E C V+HR+ + N L+ + +SD G+ + + TGT
Sbjct: 137 AYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 185
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNI 470
+F QE IG G G V+ + N +A+K I A+S E++F+E M +L HP +
Sbjct: 13 TFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKL 67
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLH-----FADDSSKNLTWNARVRVALGTARAL 525
V L G C E LV+E++ +G L D L FA ++ + L +
Sbjct: 68 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGM--------CLDVCEGM 119
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGTS 577
YL E C V+HR+ + N L+ + +SD G+ + + TGT
Sbjct: 120 AYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 168
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNI 470
+F QE IG G G V+ + N +A+K I A+S E++F+E M +L HP +
Sbjct: 8 TFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKL 62
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLH-----FADDSSKNLTWNARVRVALGTARAL 525
V L G C E LV+E++ +G L D L FA ++ + L +
Sbjct: 63 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGM--------CLDVCEGM 114
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGTS 577
YL E C V+HR+ + N L+ + +SD G+ + + TGT
Sbjct: 115 AYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 163
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNI 470
+F QE IG G G V+ + N +A+K I A+S E++F+E M +L HP +
Sbjct: 10 TFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKL 64
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLH-----FADDSSKNLTWNARVRVALGTARAL 525
V L G C E LV+E++ +G L D L FA ++ + L +
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGM--------CLDVCEGM 116
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGTS 577
YL E C V+HR+ + N L+ + +SD G+ + + TGT
Sbjct: 117 AYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 165
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 75/150 (50%), Gaps = 16/150 (10%)
Query: 405 LQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEED------NFLEA 458
L+ + E +IG G G+VYRA F G +AVK AA +ED N +
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYRA-FWIGDEVAVK----AARHDPDEDISQTIENVRQE 56
Query: 459 VSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVA 518
+ L+HPNI+ L G C + LV E+ G L+ +L S K + + V A
Sbjct: 57 AKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL-----SGKRIPPDILVNWA 111
Query: 519 LGTARALEYLHEVCLPSVVHRNFKSANILL 548
+ AR + YLH+ + ++HR+ KS+NIL+
Sbjct: 112 VQIARGMNYLHDEAIVPIIHRDLKSSNILI 141
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNI 470
+F QE IG G G V+ + N +A+K I A+S E++F+E M +L HP +
Sbjct: 10 TFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKL 64
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLH-----FADDSSKNLTWNARVRVALGTARAL 525
V L G C E LV+E++ +G L D L FA ++ + L +
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGM--------CLDVCEGM 116
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
YL E SV+HR+ + N L+ + +SD G+ + + TGT
Sbjct: 117 AYLEEA---SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 164
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 21/172 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNI 470
+F QE IG G G V+ + N +A+K I A+S E++F+E M +L HP +
Sbjct: 11 TFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKL 65
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLH-----FADDSSKNLTWNARVRVALGTARAL 525
V L G C E LV E++ +G L D L FA ++ + L +
Sbjct: 66 VQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGM--------CLDVCEGM 117
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGTS 577
YL E C V+HR+ + N L+ + +SD G+ + + TGT
Sbjct: 118 AYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 166
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 85/162 (52%), Gaps = 13/162 (8%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+GEGS G VY+A G+I+A+K++ + LQE ++ +S M + P++V G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQE---IIKEISIMQQCDSPHVVKYYGS 92
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
++ +V EY G G++ D++ +K LT + + T + LEYLH
Sbjct: 93 YFKNTDLWIVMEYCGAGSVSDIIRL---RNKTLTEDEIATILQSTLKGLEYLH---FMRK 146
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAALTPN--TERQVITGT 576
+HR+ K+ NILL+ E + L+D G+A + +R + GT
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGT 188
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 17/166 (10%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKI-----DNAALSLQEEDNFLEAVSN 461
A N E IG+G G V++ K ++A+K + + +++ F V
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 462 MSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGT 521
MS L HPNIV L G H +V E+V G+L+ H D + + W+ ++R+ L
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLY---HRLLDKAHPIKWSVKLRLMLDI 131
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLD--DELNP---HLSDCGLA 562
A +EY+ P +VHR+ +S NI L DE P ++D GL+
Sbjct: 132 ALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 12/147 (8%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKI-----DNAALSLQEEDNFLEAVSN 461
A N E IG+G G V++ K ++A+K + + +++ F V
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 462 MSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGT 521
MS L HPNIV L G H +V E+V G+L+ H D + + W+ ++R+ L
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLY---HRLLDKAHPIKWSVKLRLMLDI 131
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILL 548
A +EY+ P +VHR+ +S NI L
Sbjct: 132 ALGIEYMQNQN-PPIVHRDLRSPNIFL 157
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 12/147 (8%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKI-----DNAALSLQEEDNFLEAVSN 461
A N E IG+G G V++ K ++A+K + + +++ F V
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 462 MSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGT 521
MS L HPNIV L G H +V E+V G+L+ H D + + W+ ++R+ L
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLY---HRLLDKAHPIKWSVKLRLMLDI 131
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILL 548
A +EY+ P +VHR+ +S NI L
Sbjct: 132 ALGIEYMQNQN-PPIVHRDLRSPNIFL 157
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
IG GS G VY+ ++ +G + AVK ++ A + Q+ F V + + RH NI+ GY
Sbjct: 21 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ Q +V ++ +L+ LH + + + + +A TA+ ++YLH S++
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHA---KSII 131
Query: 538 HRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ KS NI L ++L + D GLA +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATV 158
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
IG GS G VY+ ++ +G + AVK ++ A + Q+ F V + + RH NI+ GY
Sbjct: 16 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ Q +V ++ +L+ LH + + + + +A TA+ ++YLH S++
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHA---KSII 126
Query: 538 HRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ KS NI L ++L + D GLA +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATV 153
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
IG GS G VY+ ++ +G + AVK ++ A + Q+ F V + + RH NI+ GY
Sbjct: 18 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ Q +V ++ +L+ LH + + + + +A TA+ ++YLH S++
Sbjct: 76 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHA---KSII 128
Query: 538 HRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ KS NI L ++L + D GLA +
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATV 155
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
IG GS G VY+ ++ +G + AVK ++ A + Q+ F V + + RH NI+ GY
Sbjct: 21 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ Q +V ++ +L+ LH + + + + +A TA+ ++YLH S++
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHA---KSII 131
Query: 538 HRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ KS NI L ++L + D GLA +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATV 158
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
IG GS G VY+ ++ +G + AVK ++ A + Q+ F V + + RH NI+ GY
Sbjct: 16 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ Q +V ++ +L+ LH + + + + +A TA+ ++YLH S++
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHA---KSII 126
Query: 538 HRNFKSANILLDDELNPHLSDCGLA 562
HR+ KS NI L ++L + D GLA
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
IG GS G VY+ ++ +G + AVK ++ A + Q+ F V + + RH NI+ GY
Sbjct: 44 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ Q +V ++ +L+ LH + + + + +A TA+ ++YLH S++
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHA---KSII 154
Query: 538 HRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ KS NI L ++L + D GLA +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATV 181
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
IG GS G VY+ ++ +G + AVK ++ A + Q+ F V + + RH NI+ GY
Sbjct: 43 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ Q +V ++ +L+ LH + + + + +A TA+ ++YLH S++
Sbjct: 101 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHA---KSII 153
Query: 538 HRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ KS NI L ++L + D GLA +
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATV 180
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
IG GS G VY+ ++ +G + AVK ++ A + Q+ F V + + RH NI+ GY
Sbjct: 16 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
Q +V ++ +L+ LH + + + + +A TA+ ++YLH S++
Sbjct: 74 TA-PQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHA---KSII 126
Query: 538 HRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ KS NI L ++L + D GLA +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATV 153
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
IG GS G VY+ ++ +G + AVK ++ A + Q+ F V + + RH NI+ GY
Sbjct: 36 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ Q +V ++ +L+ LH + + + + +A TA+ ++YLH S++
Sbjct: 94 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHA---KSII 146
Query: 538 HRNFKSANILLDDELNPHLSDCGLA 562
HR+ KS NI L ++L + D GLA
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 18/139 (12%)
Query: 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLA 474
E ++G G+ G V +A++ K +A+K+I++ + E F+ + +SR+ HPNIV L
Sbjct: 14 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESES----ERKAFIVELRQLSRVNHPNIVKLY 68
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADD-----SSKNLTWNARVRVALGTARALEYLH 529
G C LV EY G+L+++LH A+ ++ ++W L ++ + YLH
Sbjct: 69 GACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLH 120
Query: 530 EVCLPSVVHRNFKSANILL 548
+ +++HR+ K N+LL
Sbjct: 121 SMQPKALIHRDLKPPNLLL 139
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
IG GS G VY+ ++ +G + AVK ++ A + Q+ F V + + RH NI+ GY
Sbjct: 44 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ Q +V ++ +L+ LH + + + + +A TA+ ++YLH S++
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHA---KSII 154
Query: 538 HRNFKSANILLDDELNPHLSDCGLA 562
HR+ KS NI L ++L + D GLA
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 18/139 (12%)
Query: 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLA 474
E ++G G+ G V +A++ K +A+K+I++ + E F+ + +SR+ HPNIV L
Sbjct: 13 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESES----ERKAFIVELRQLSRVNHPNIVKLY 67
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADD-----SSKNLTWNARVRVALGTARALEYLH 529
G C LV EY G+L+++LH A+ ++ ++W L ++ + YLH
Sbjct: 68 GACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLH 119
Query: 530 EVCLPSVVHRNFKSANILL 548
+ +++HR+ K N+LL
Sbjct: 120 SMQPKALIHRDLKPPNLLL 138
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 9/147 (6%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
IG GS G VY+ ++ +G + AVK ++ A + Q+ F V + + RH NI+ GY
Sbjct: 20 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ Q +V ++ +L+ LH S + +A TAR ++YLH S++
Sbjct: 78 TK-PQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLHA---KSII 130
Query: 538 HRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ KS NI L ++ + D GLA +
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATV 157
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 9/145 (6%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
IG GS G VY+ ++ +G + AVK ++ A + Q+ F V + + RH NI+ GY
Sbjct: 32 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ Q +V ++ +L+ LH S + +A TAR ++YLH S++
Sbjct: 90 TK-PQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLHA---KSII 142
Query: 538 HRNFKSANILLDDELNPHLSDCGLA 562
HR+ KS NI L ++ + D GLA
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 10/147 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLE-AVSNMSRLRHPNIVTLAG 475
+GEGS G+V A G+ +A+K I+ L+ + +E +S + LRHP+I+ L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
+ ++V EY GN L D + D S+ AR R A+EY H
Sbjct: 82 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQ---EAR-RFFQQIISAVEYCHR---HK 133
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLA 562
+VHR+ K N+LLD+ LN ++D GL+
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLS 160
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 10/147 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLE-AVSNMSRLRHPNIVTLAG 475
+GEGS G+V A G+ +A+K I+ L+ + +E +S + LRHP+I+ L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
+ ++V EY GN L D + D S+ AR R A+EY H
Sbjct: 81 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQ---EAR-RFFQQIISAVEYCHR---HK 132
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLA 562
+VHR+ K N+LLD+ LN ++D GL+
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLS 159
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 10/147 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLE-AVSNMSRLRHPNIVTLAG 475
+GEGS G+V A G+ +A+K I+ L+ + +E +S + LRHP+I+ L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
+ ++V EY GN L D + D S+ AR R A+EY H
Sbjct: 72 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQ---EAR-RFFQQIISAVEYCHR---HK 123
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLA 562
+VHR+ K N+LLD+ LN ++D GL+
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLS 150
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 10/147 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLE-AVSNMSRLRHPNIVTLAG 475
+GEGS G+V A G+ +A+K I+ L+ + +E +S + LRHP+I+ L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
+ ++V EY GN L D + D S+ AR R A+EY H
Sbjct: 76 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQ---EAR-RFFQQIISAVEYCHR---HK 127
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLA 562
+VHR+ K N+LLD+ LN ++D GL+
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLS 154
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 9/145 (6%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
IG GS G VY+ ++ +G + AVK ++ A + Q+ F V + + RH NI+ GY
Sbjct: 32 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
Q +V ++ +L+ LH S + +A TAR ++YLH S++
Sbjct: 90 TA-PQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLHA---KSII 142
Query: 538 HRNFKSANILLDDELNPHLSDCGLA 562
HR+ KS NI L ++ + D GLA
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 77/178 (43%), Gaps = 13/178 (7%)
Query: 403 ASLQTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVS 460
A Q A F +G+G G VY A N K I+A+K + A L E V
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 461 NMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVA 518
S LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 61 IQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 117
Query: 519 LGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 118 ---ANALSYCHS---KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGT 169
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQ-EEDNFLEAVSNMSRLRHPNIVTLAG 475
+G+G G VY A E N IMA+K + + L + E + S LRHPNI+ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 476 YCAEHGQRLLVYEYVGNGNLHDML--HFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
Y + + L+ E+ G L+ L H D ++ T+ + A AL Y HE
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL------ADALHYCHER-- 133
Query: 534 PSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
V+HR+ K N+L+ + ++D G + P+ R+ + GT
Sbjct: 134 -KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGT 175
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQE-EDNFLEAVSNMSRLRHPNIVTLAG 475
+G+G G VY A E N IMA+K + + L + E + S LRHPNI+ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 476 YCAEHGQRLLVYEYVGNGNLHDML--HFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
Y + + L+ E+ G L+ L H D ++ T+ + A AL Y HE
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL------ADALHYCHER-- 133
Query: 534 PSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
V+HR+ K N+L+ + ++D G + P+ R+ + GT
Sbjct: 134 -KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGT 175
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQE-EDNFLEAVSNMSRLRHPNIVTLAG 475
+G+G G VY A E N IMA+K + + L + E + S LRHPNI+ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 476 YCAEHGQRLLVYEYVGNGNLHDML--HFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
Y + + L+ E+ G L+ L H D ++ T+ + A AL Y HE
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL------ADALHYCHER-- 134
Query: 534 PSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
V+HR+ K N+L+ + ++D G + P+ R+ + GT
Sbjct: 135 -KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGT 176
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IG+G+ +V A GK +AVK ID L+ V M L HPNIV L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
LV EY G + D L A K A+ R + A++Y H+ +
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVS---AVQYCHQ---KFI 134
Query: 537 VHRNFKSANILLDDELNPHLSDCGLA 562
VHR+ K+ N+LLD ++N ++D G +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IG+G+ +V A GK +AVK ID L+ V M L HPNIV L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
LV EY G + D L A K A+ R + A++Y H+ +
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVS---AVQYCHQ---KFI 134
Query: 537 VHRNFKSANILLDDELNPHLSDCGLA 562
VHR+ K+ N+LLD ++N ++D G +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G G V+ + +AVK + ++S D FL + M +L+H +V L
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ ++ EY+ NG+L D L S LT N + +A A + ++ E + +
Sbjct: 74 TQEPIYIIT-EYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 127
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
HRN ++ANIL+ D L+ ++D GLA L + E
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNE 159
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IG+G+ +V A GK +AVK ID L+ V M L HPNIV L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
LV EY G + D L A K A+ R + A++Y H+ +
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVS---AVQYCHQ---KFI 134
Query: 537 VHRNFKSANILLDDELNPHLSDCGLA 562
VHR+ K+ N+LLD ++N ++D G +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMS 463
Q A F +G+G G VY A K I+A+K + A L E V S
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGT 521
LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL------ 122
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 123 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 174
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMS 463
Q A F +G+G G VY A K I+A+K + A L E V S
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGT 521
LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL------ 122
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 123 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGT 174
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 24/190 (12%)
Query: 389 KKIKSPITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIM---AVKKIDNA 445
+K+K+ T Y V N + +IGEG+ G+V +A + A+K++
Sbjct: 5 RKVKNNPDPTIYPVLDW----NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY 60
Query: 446 ALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLH---- 500
A S + +F + + +L HPNI+ L G C G L EY +GNL D L
Sbjct: 61 A-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV 119
Query: 501 --------FADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL 552
A+ ++ L+ + A AR ++YL + +HRN + NIL+ +
Sbjct: 120 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRNLAARNILVGENY 176
Query: 553 NPHLSDCGLA 562
++D GL+
Sbjct: 177 VAKIADFGLS 186
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR 464
Q ++ + IG+G+ +V A G+ +AVK ID L+ V M
Sbjct: 11 QPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKI 70
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARA 524
L HPNIV L LV EY G + D L A K A+ R + A
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVS---A 126
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
++Y H+ +VHR+ K+ N+LLD ++N ++D G +
Sbjct: 127 VQYCHQ---KYIVHRDLKAENLLLDGDMNIKIADFGFS 161
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IG+G+ +V A GK +AVK ID L+ V M L HPNIV L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
LV EY G + D L A K A+ R + A++Y H+ +
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYL-VAHGWMKEKEARAKFRQIVS---AVQYCHQ---KFI 127
Query: 537 VHRNFKSANILLDDELNPHLSDCGLA 562
VHR+ K+ N+LLD ++N ++D G +
Sbjct: 128 VHRDLKAENLLLDADMNIKIADFGFS 153
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 77/179 (43%), Gaps = 13/179 (7%)
Query: 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAV 459
+ S Q A F +G+G G VY A K I+A+K + A L E V
Sbjct: 3 MGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 460 SNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRV 517
S LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-- 120
Query: 518 ALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 121 ----ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGT 172
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IG+G+ +V A GK +AV+ ID L+ V M L HPNIV L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
LV EY G + D L A K A+ R + A++Y H+ +
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVS---AVQYCHQ---KFI 134
Query: 537 VHRNFKSANILLDDELNPHLSDCGLA 562
VHR+ K+ N+LLD ++N ++D G +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IG+G+ +V A GK +AV+ ID L+ V M L HPNIV L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
LV EY G + D L A K A+ R + A++Y H+ +
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVS---AVQYCHQ---KFI 134
Query: 537 VHRNFKSANILLDDELNPHLSDCGLA 562
VHR+ K+ N+LLD ++N ++D G +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 76/178 (42%), Gaps = 13/178 (7%)
Query: 403 ASLQTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVS 460
A Q A F +G+G G VY A K I+A+K + A L E V
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 461 NMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVA 518
S LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 117
Query: 519 LGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 118 ---ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGT 169
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 76/175 (43%), Gaps = 13/175 (7%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMS 463
Q A F +G+G G VY A K I+A+K + A L E V S
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGT 521
LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 118
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R ++GT
Sbjct: 119 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGT 170
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 417 LIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG 475
++G+G G+ + G++M +K++ + + FL+ V M L HPN++ G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKEL--IRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
+ + + EY+ G L ++ D W+ RV A A + YLH + +
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDS---QYPWSQRVSFAKDIASGMAYLHSM---N 128
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
++HR+ S N L+ + N ++D GLA L + + Q
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMS 463
+ + S E +G+G G V+ + +A+K + +S + FL+ M
Sbjct: 2 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMK 58
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR 523
+LRH +V L +E +V EY+ G+L D L ++ K L V +A A
Sbjct: 59 KLRHEKLVQLYAVVSEE-PIXIVTEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIAS 115
Query: 524 ALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
+ Y+ + + VHR+ ++ANIL+ + L ++D GLA L + E
Sbjct: 116 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 158
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 417 LIGEGSLGRVYRAEF---ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL 473
+IG+G G VY E+ A +I K + +Q+ + FL M L HPN++ L
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 474 AG-YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
G G ++ Y+ +G D+L F +N T + L AR +EYL E
Sbjct: 88 IGIMLPPEGLPHVLLPYMCHG---DLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAE-- 142
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA 562
VHR+ + N +LD+ ++D GLA
Sbjct: 143 -QKFVHRDLAARNCMLDESFTVKVADFGLA 171
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G G V+ + +AVK + ++S D FL + M +L+H +V L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ ++ EY+ NG+L D L S LT N + +A A + ++ E + +
Sbjct: 84 TQEPI-YIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 137
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
HR+ ++ANIL+ D L+ ++D GLA L + E
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNE 169
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 77/179 (43%), Gaps = 13/179 (7%)
Query: 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAV 459
+ S Q A F +G+G G VY A K I+A+K + A L E V
Sbjct: 3 LGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 460 SNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRV 517
S LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-- 120
Query: 518 ALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 121 ----ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGT 172
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMS 463
+ + S E +G+G G V+ + +A+K + +S + FL+ M
Sbjct: 5 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMK 61
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR 523
+LRH +V L +E +V EY+ G+L D L ++ K L V +A A
Sbjct: 62 KLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIAS 118
Query: 524 ALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
+ Y+ + + VHR+ ++ANIL+ + L ++D GLA L + E
Sbjct: 119 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 161
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G G V+ + +AVK + ++S D FL + M +L+H +V L
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ ++ EY+ NG+L D L S LT N + +A A + ++ E + +
Sbjct: 86 TQEPI-YIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 139
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
HR+ ++ANIL+ D L+ ++D GLA L + E
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNE 171
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G G V+ + +AVK + ++S D FL + M +L+H +V L
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ ++ EY+ NG+L D L S LT N + +A A + ++ E + +
Sbjct: 87 TQEPI-YIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 140
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
HR+ ++ANIL+ D L+ ++D GLA L + E
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNE 172
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G G V+ + +AVK + ++S D FL + M +L+H +V L
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ ++ EY+ NG+L D L S LT N + +A A + ++ E + +
Sbjct: 73 TQEPIYIIT-EYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 126
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
HR+ ++ANIL+ D L+ ++D GLA L + E
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNE 158
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G G V+ + +AVK + ++S D FL + M +L+H +V L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ ++ EY+ NG+L D L S LT N + +A A + ++ E + +
Sbjct: 84 TQEPIYIIT-EYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 137
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
HR+ ++ANIL+ D L+ ++D GLA L + E
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNE 169
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMS 463
Q A F +G+G G VY A K I+A+K + A L E V S
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGT 521
LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 121
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 122 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 173
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMS 463
Q A F +G+G G VY A K I+A+K + A L E V S
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGT 521
LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 118
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 119 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGT 170
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G G V+ + +AVK + ++S D FL + M +L+H +V L
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ ++ EY+ NG+L D L S LT N + +A A + ++ E + +
Sbjct: 80 TQEPI-YIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 133
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
HR+ ++ANIL+ D L+ ++D GLA L + E
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNE 165
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G G V+ + +AVK + ++S D FL + M +L+H +V L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ ++ EY+ NG+L D L S LT N + +A A + ++ E + +
Sbjct: 78 TQEPI-YIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 131
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
HR+ ++ANIL+ D L+ ++D GLA L + E
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNE 163
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G G V+ + +AVK + ++S D FL + M +L+H +V L
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ ++ EY+ NG+L D L S LT N + +A A + ++ E + +
Sbjct: 88 TQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 141
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
HR+ ++ANIL+ D L+ ++D GLA L + E
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNE 173
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G G V+ + +AVK + ++S D FL + M +L+H +V L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ ++ EY+ NG+L D L S LT N + +A A + ++ E + +
Sbjct: 78 TQEPIYIIT-EYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 131
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
HR+ ++ANIL+ D L+ ++D GLA L + E
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNE 163
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMS 463
+ + S E +G+G G V+ + +A+K + +S + FL+ M
Sbjct: 261 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMK 317
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR 523
+LRH +V L +E +V EY+ G+L D L ++ K L V +A A
Sbjct: 318 KLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIAS 374
Query: 524 ALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
+ Y+ + + VHR+ ++ANIL+ + L ++D GLA L + E
Sbjct: 375 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 417
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMS 463
+ + S E +G+G G V+ + +A+K + +S + FL+ M
Sbjct: 178 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMK 234
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR 523
+LRH +V L +E +V EY+ G+L D L ++ K L V +A A
Sbjct: 235 KLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIAS 291
Query: 524 ALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
+ Y+ + + VHR+ ++ANIL+ + L ++D GLA L + E
Sbjct: 292 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G G V+ + +AVK + ++S D FL + M +L+H +V L
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ ++ EY+ NG+L D L S LT N + +A A + ++ E + +
Sbjct: 79 TQEPI-YIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 132
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
HR+ ++ANIL+ D L+ ++D GLA L + E
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNE 164
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 9/160 (5%)
Query: 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
S E +G+G G V+ + +A+K + +S + FL+ M +LRH
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 240
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH 529
+V L +E +V EY+ G+L D L ++ K L V +A A + Y+
Sbjct: 241 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 530 EVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
+ + VHR+ ++ANIL+ + L ++D GLA L + E
Sbjct: 298 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G G V+ + +AVK + ++S D FL + M +L+H +V L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ ++ EY+ NG+L D L S LT N + +A A + ++ E + +
Sbjct: 78 TQEPIYIIT-EYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 131
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
HR+ ++ANIL+ D L+ ++D GLA L + E
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNE 163
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G G V+ + +AVK + ++S D FL + M +L+H +V L
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ ++ EY+ NG+L D L S LT N + +A A + ++ E + +
Sbjct: 83 TQEPIYIIT-EYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 136
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
HR+ ++ANIL+ D L+ ++D GLA L + E
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNE 168
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLE-AVSNMSRLRHPNIVTLAG 475
+GEGS G+V A + + +A+K I L + +E +S + LRHP+I+ L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
++V EY G G L D + K +T + R A+EY H
Sbjct: 77 VITTPTDIVMVIEYAG-GELFDYIV----EKKRMTEDEGRRFFQQIICAIEYCHR---HK 128
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLA 562
+VHR+ K N+LLDD LN ++D GL+
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLS 155
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMS 463
Q A F +G+G G VY A K I+A+K + A L E V S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGT 521
LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 117
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 118 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGT 169
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMS 463
Q A F +G+G G VY A K I+A+K + A L E V S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGT 521
LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 117
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 118 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 169
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMS 463
Q A F +G+G G VY A K I+A+K + A L E V S
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGT 521
LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 122
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 123 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 174
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMS 463
Q A F +G+G G VY A K I+A+K + A L E V S
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGT 521
LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 116
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 117 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 168
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMS 463
Q A F +G+G G VY A K I+A+K + A L E V S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGT 521
LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 120
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 121 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 172
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMS 463
Q A F +G+G G VY A K I+A+K + A L E V S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGT 521
LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 117
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 118 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGT 169
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMS 463
Q A F +G+G G VY A K I+A+K + A L E V S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGT 521
LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 120
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 121 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 172
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMS 463
+ + S E +G+G G V+ + +A+K + +S + FL+ M
Sbjct: 12 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMK 68
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR 523
+LRH +V L +E +++ EY+ G+L D L + K L V +A A
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIAS 125
Query: 524 ALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
+ Y+ + + VHR+ ++ANIL+ + L ++D GLA L + E
Sbjct: 126 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMS 463
+ + S E +G+G G V+ + +A+K + +S + FL+ M
Sbjct: 12 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMK 68
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR 523
+LRH +V L +E +++ EY+ G+L D L + K L V +A A
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIAS 125
Query: 524 ALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
+ Y+ + + VHR+ ++ANIL+ + L ++D GLA L + E
Sbjct: 126 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMS 463
Q A F +G+G G VY A K I+A+K + A L E V S
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGT 521
LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 119
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 120 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGT 171
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMS 463
Q A F +G+G G VY A K I+A+K + A L E V S
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGT 521
LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 122
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 123 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 174
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMS 463
+ + S E +G+G G V+ + +A+K + +S + FL+ M
Sbjct: 178 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMK 234
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR 523
+LRH +V L +E +V EY+ G+L D L ++ K L V +A A
Sbjct: 235 KLRHEKLVQLYAVVSEE-PIYIVGEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIAS 291
Query: 524 ALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
+ Y+ + + VHR+ ++ANIL+ + L ++D GLA L + E
Sbjct: 292 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMS 463
Q A F +G+G G VY A K I+A+K + A L E V S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGT 521
LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 120
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 121 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGT 172
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G G V+ + +AVK + ++S D FL + M +L+H +V L
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ ++ EY+ NG+L D L S LT N + +A A + ++ E + +
Sbjct: 78 TQEPI-YIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 131
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
HR+ ++ANIL+ D L+ ++D GLA L + E
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAE 163
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQ-EEDNFLEAVSNMS 463
Q A F +G+G G VY A K I+A+K + A L E V S
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGT 521
LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 114
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 115 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 166
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 5/154 (3%)
Query: 416 FLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLA 474
+ IG GS GR + ++GKI+ K++D +++ E+ + V+ + L+HPNIV
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 475 GYCAEHGQRLL--VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
+ L V EY G+L ++ + L +RV AL+ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 533 L--PSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
+V+HR+ K AN+ LD + N L D GLA +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 35/212 (16%)
Query: 40 DSSDVQALQVLYTSLNSPSVLTNWKGNEGDPCGESWKGVACEGSAVVSIDISGLGLSGTM 99
+ D QAL + L +P+ L++W D C +W GV C+ + T
Sbjct: 4 NPQDKQALLQIKKDLGNPTTLSSWLPTT-DCCNRTWLGVLCD--------------TDTQ 48
Query: 100 GYLLSDLLSLRKFDLSGNSIHDTIPYQLP---PNLTSLNL----ASNNFSGNLPYSIASM 152
Y +++L DLSG ++ PY +P NL LN NN G +P +IA +
Sbjct: 49 TYRVNNL------DLSGLNLPK--PYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKL 100
Query: 153 VSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDXXXXXXXXXXXXXXXXXXXQ 212
L YL ++ +++ +I D + L TLD S+N SG +
Sbjct: 101 TQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160
Query: 213 VTGSL----NVFSGLPLTTLNVANNHFSGWIP 240
++G++ FS L T++ ++ N +G IP
Sbjct: 161 ISGAIPDSYGSFSKL-FTSMTISRNRLTGKIP 191
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 85 VVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQ---LPPNLTSLNLASNNF 141
+V++D S LSGT+ +S L +L GN I IP TS+ ++ N
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186
Query: 142 SGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGD 192
+G +P + A++ +L+++++SRN L +FG+ + L+ N+ + D
Sbjct: 187 TGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFD 236
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 88 IDISGLGLSGTMGYLLSDLLSLRKFDLSGNSI-HDTIPYQLPPNLTSLNLASNNFSGNLP 146
+D+S L G L + +K L+ NS+ D L NL L+L +N G LP
Sbjct: 202 VDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLP 261
Query: 147 YSIASMVSLSYLNVSRNSLTQSI 169
+ + L LNVS N+L I
Sbjct: 262 QGLTQLKFLHSLNVSFNNLCGEI 284
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMS 463
Q A F +G+G G VY A K I+A+K + A L E V S
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGT 521
LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 143
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 144 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 195
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMS 463
+ + S E +G+G G V+ + +A+K + +S + FL+ M
Sbjct: 1 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMK 57
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR 523
+LRH +V L +E +V EY+ G+L D L + K L V +A A
Sbjct: 58 KLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIAS 114
Query: 524 ALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
+ Y+ + + VHR+ ++ANIL+ + L ++D GLA L + E
Sbjct: 115 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 157
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMS 463
+ + S E +G+G G V+ + +A+K + +S + FL+ M
Sbjct: 12 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMK 68
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR 523
+LRH +V L +E +V EY+ G+L D L + K L V +A A
Sbjct: 69 KLRHEKLVQLYAVVSEE-PIYIVCEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIAS 125
Query: 524 ALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
+ Y+ + + VHR+ ++ANIL+ + L ++D GLA L + E
Sbjct: 126 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMS 463
+ + S E +G+G G V+ + +A+K + +S + FL+ M
Sbjct: 12 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMK 68
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR 523
+LRH +V L +E +V EY+ G+L D L + K L V +A A
Sbjct: 69 KLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIAS 125
Query: 524 ALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
+ Y+ + + VHR+ ++ANIL+ + L ++D GLA L + E
Sbjct: 126 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 5/154 (3%)
Query: 416 FLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLA 474
+ IG GS GR + ++GKI+ K++D +++ E+ + V+ + L+HPNIV
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 475 GYCAEHGQRLL--VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
+ L V EY G+L ++ + L +RV AL+ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 533 L--PSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
+V+HR+ K AN+ LD + N L D GLA +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 416 FLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLA 474
+ IG GS GR + ++GKI+ K++D +++ E+ + V+ + L+HPNIV
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 475 GYCAEHGQRLL--VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
+ L V EY G+L ++ + L +RV AL+ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 533 L--PSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
+V+HR+ K AN+ LD + N L D GLA + + E
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE 170
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMS 463
+ + S E +G+G G V+ + +A+K + +S + FL+ M
Sbjct: 3 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMK 59
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR 523
+LRH +V L +E +V EY+ G+L D L + K L V +A A
Sbjct: 60 KLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIAS 116
Query: 524 ALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
+ Y+ + + VHR+ ++ANIL+ + L ++D GLA L + E
Sbjct: 117 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 159
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IG+G+ +V A G+ +A+K ID L+ V M L HPNIV L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
L+ EY G + D L A K ++ R + A++Y H+ +
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYL-VAHGRMKEKEARSKFRQIVS---AVQYCHQ---KRI 132
Query: 537 VHRNFKSANILLDDELNPHLSDCGLA 562
VHR+ K+ N+LLD ++N ++D G +
Sbjct: 133 VHRDLKAENLLLDADMNIKIADFGFS 158
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 415 EFLIGEGSLGRVYRAEF-ANGK---IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNI 470
E +IG G G V R A GK +A+K + Q + FL S M + HPNI
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRRE-FLSEASIMGQFEHPNI 77
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE 530
+ L G +++ E++ NG L L D + +R G A + YL E
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMRYLAE 134
Query: 531 VCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ S VHR+ + NIL++ L +SD GL+
Sbjct: 135 M---SYVHRDLAARNILVNSNLVCKVSDFGLS 163
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 10/170 (5%)
Query: 396 TATSYTVASLQTATNSFSQEFLIGEGSLGRVY--RAEFANGKIMAVK-KIDNAALSLQEE 452
T T + A ATN S + ++G G G V R + + K ++V K + ++
Sbjct: 32 TQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 453 DNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWN 512
+FL S M + HPNI+ L G + ++V EY+ NG+L L D T
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVI 147
Query: 513 ARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
V + G A ++YL ++ VHR+ + NIL++ L +SD GLA
Sbjct: 148 QLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLA 194
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IG+G+ +V A G+ +A+K ID L+ V M L HPNIV L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
L+ EY G + D L A K ++ R + A++Y H+ +
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYL-VAHGRMKEKEARSKFRQIVS---AVQYCHQ---KRI 135
Query: 537 VHRNFKSANILLDDELNPHLSDCGLA 562
VHR+ K+ N+LLD ++N ++D G +
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFS 161
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMS 463
Q A F +G+G G VY A K I+A+K + A L E V S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGT 521
LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 117
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 118 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGT 169
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 77/182 (42%), Gaps = 13/182 (7%)
Query: 399 SYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFL 456
S+ Q A F +G+G G VY A K I+A+K + A L E
Sbjct: 2 SHMSKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 457 EAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNAR 514
V S LRHPNI+ L GY + + L+ EY G ++ L D + T+
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 515 VRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVIT 574
+ A AL Y H V+HR+ K N+LL ++D G + P++ R +
Sbjct: 122 L------ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC 172
Query: 575 GT 576
GT
Sbjct: 173 GT 174
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMS 463
Q A F +G+G G VY A K I+A+K + A L E V S
Sbjct: 21 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 80
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGT 521
LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 81 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 134
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 135 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 186
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 415 EFLIGEGSLGRVYRAEF-ANGK---IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNI 470
E +IG G G V R A GK +A+K + Q + FL S M + HPNI
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRRE-FLSEASIMGQFEHPNI 79
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE 530
+ L G +++ E++ NG L L D + +R G A + YL E
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMRYLAE 136
Query: 531 VCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ S VHR+ + NIL++ L +SD GL+
Sbjct: 137 M---SYVHRDLAARNILVNSNLVCKVSDFGLS 165
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMS 463
+ + S E +G+G G V+ + +A+K + +S + FL+ M
Sbjct: 9 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMK 65
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR 523
+LRH +V L +E +V EY+ G+L D L ++ K L V ++ A
Sbjct: 66 KLRHEKLVQLYAVVSEE-PIYIVTEYMNKGSLLDFLK--GETGKYLRLPQLVDMSAQIAS 122
Query: 524 ALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
+ Y+ + + VHR+ ++ANIL+ + L ++D GLA L + E
Sbjct: 123 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 165
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 418 IGEGSLGR-VYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IGEGS G+ + +G+ +K+I+ + +S +E + V+ ++ ++HPNIV
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLP-- 534
E+G +V +Y G+L + NA+ V + L++ ++CL
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRI------------NAQKGVLFQEDQILDWFVQICLALK 139
Query: 535 -----SVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568
++HR+ KS NI L + L D G+A + +T
Sbjct: 140 HVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMS 463
+ + S E +G+G G V+ + +A+K + +S + FL+ M
Sbjct: 12 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMK 68
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR 523
+LRH +V L +E +V EY+ G L D L + K L V +A A
Sbjct: 69 KLRHEKLVQLYAVVSEE-PIYIVMEYMSKGCLLDFLK--GEMGKYLRLPQLVDMAAQIAS 125
Query: 524 ALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
+ Y+ + + VHR+ ++ANIL+ + L ++D GLA L + E
Sbjct: 126 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMS 463
+ + S E +G+G G V+ + +A+K + +S + FL+ M
Sbjct: 9 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMK 65
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR 523
+LRH +V L +E +V EY+ G+L D L ++ K L V ++ A
Sbjct: 66 KLRHEKLVQLYAVVSEE-PIYIVTEYMNKGSLLDFLK--GETGKYLRLPQLVDMSAQIAS 122
Query: 524 ALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
+ Y+ + + VHR+ ++ANIL+ + L ++D GLA L + E
Sbjct: 123 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 165
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMS 463
Q A F +G+G G VY A K I+A+K + A L E V S
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGT 521
LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 118
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 119 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGT 170
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 20/169 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRAEFANGKIM---AVKKIDNAALSLQEEDNFLEAVSNMSRL- 465
N + +IGEG+ G+V +A + A+K++ A S + +F + + +L
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLG 83
Query: 466 RHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLH------------FADDSSKNLTWNA 513
HPNI+ L G C G L EY +GNL D L A+ ++ L+
Sbjct: 84 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 143
Query: 514 RVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ A AR ++YL + +HR+ + NIL+ + ++D GL+
Sbjct: 144 LLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLS 189
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 20/169 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRAEFANGKIM---AVKKIDNAALSLQEEDNFLEAVSNMSRL- 465
N + +IGEG+ G+V +A + A+K++ A S + +F + + +L
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLG 73
Query: 466 RHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLH------------FADDSSKNLTWNA 513
HPNI+ L G C G L EY +GNL D L A+ ++ L+
Sbjct: 74 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 133
Query: 514 RVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ A AR ++YL + +HR+ + NIL+ + ++D GL+
Sbjct: 134 LLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLS 179
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 9/160 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G G V ++ +AVK I ++S ED F + M +L HP +V G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS---EDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
++ +V EY+ NG L L++ K L + + + + +L +
Sbjct: 73 SKEYPIYIVTEYISNGCL---LNYLRSHGKGLEPSQLLEMCYDVCEGMAFLES---HQFI 126
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGTS 577
HR+ + N L+D +L +SD G+ + + GT
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTK 166
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMS 463
Q A F +G+G G VY A K I+A+K + A L E V S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGT 521
LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 117
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 118 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGT 169
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMS 463
Q A F +G+G G VY A K I+A+K + A L E V S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGT 521
LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 117
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 118 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGT 169
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 9/160 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G G V+ + +A+K + +S ++FLE M +L+H +V L
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMS---PESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+E +V EY+ G+L D L D + L V +A A + Y+ + + +
Sbjct: 74 SEE-PIYIVTEYMNKGSLLDFLK--DGEGRALKLPNLVDMAAQVAAGMAYIERM---NYI 127
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGTS 577
HR+ +SANIL+ + L ++D GLA L + E G
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAK 167
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMS 463
+ + S E +G+G G V+ + +A+K + +S + FL+ M
Sbjct: 12 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMK 68
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR 523
++RH +V L +E +V EY+ G+L D L + K L V +A A
Sbjct: 69 KIRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIAS 125
Query: 524 ALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
+ Y+ + + VHR+ ++ANIL+ + L ++D GLA L + E
Sbjct: 126 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMS 463
Q A F +G+G G VY A K I+A+K + A L E V S
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGT 521
LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 143
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 144 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGT 195
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMS 463
+ + S E +G+G G V+ + +A+K + +S + FL+ M
Sbjct: 12 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMK 68
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR 523
+LRH +V L +E +V EY+ G L D L + K L V +A A
Sbjct: 69 KLRHEKLVQLYAVVSEE-PIYIVTEYMSKGCLLDFLK--GEMGKYLRLPQLVDMAAQIAS 125
Query: 524 ALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
+ Y+ + + VHR+ ++ANIL+ + L ++D GLA L + E
Sbjct: 126 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 10/170 (5%)
Query: 396 TATSYTVASLQTATNSFSQEFLIGEGSLGRVY--RAEFANGKIMAVK-KIDNAALSLQEE 452
T T + A ATN S + ++G G G V R + + K ++V K + ++
Sbjct: 20 TQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 78
Query: 453 DNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWN 512
+FL S M + HPNI+ L G + ++V EY+ NG+L L D T
Sbjct: 79 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVI 135
Query: 513 ARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
V + G A ++YL ++ VHR+ + NIL++ L +SD GL+
Sbjct: 136 QLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLS 182
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
IG+G G V ++ K+ AVK I N A + FL S M++LRH N+V L G
Sbjct: 20 IGKGEFGDVMLGDYRGNKV-AVKCIKNDATA----QAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 478 AEH-GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
E G +V EY+ G+L D L S L + ++ +L A+EYL +
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKFSLDVCEAMEYLEG---NNF 129
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
VHR+ + N+L+ ++ +SD GL +T+
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 162
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G G V+ + N +AVK + +S+Q FLE + M L+H +V L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQ---AFLEEANLMKTLQHDKLVRLYAVV 77
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
++ EY+ G+L D L +D+ K L + + A + Y+ + +
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLK-SDEGGKVLL-PKLIDFSAQIAEGMAYIER---KNYI 132
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
HR+ ++AN+L+ + L ++D GLA + + E
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNE 164
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
IG+G G V ++ K+ AVK I N A + FL S M++LRH N+V L G
Sbjct: 29 IGKGEFGDVMLGDYRGNKV-AVKCIKNDATA----QAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 478 AEH-GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
E G +V EY+ G+L D L S L + ++ +L A+EYL +
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKFSLDVCEAMEYLEG---NNF 138
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
VHR+ + N+L+ ++ +SD GL +T+
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 171
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 10/172 (5%)
Query: 396 TATSYTVASLQTATNSFSQEFLIGEGSLGRVY--RAEFANGKIMAVK-KIDNAALSLQEE 452
T T + A ATN S + ++G G G V R + + K ++V K + ++
Sbjct: 32 TQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 453 DNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWN 512
+FL S M + HPNI+ L G + ++V EY+ NG+L L D T
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVI 147
Query: 513 ARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
V + G A ++YL ++ VHR+ + NIL++ L +SD GL+ +
Sbjct: 148 QLVGMLRGIASGMKYLSDM---GFVHRDLAARNILINSNLVCKVSDFGLSRV 196
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 10/170 (5%)
Query: 396 TATSYTVASLQTATNSFSQEFLIGEGSLGRVY--RAEFANGKIMAVK-KIDNAALSLQEE 452
T T + A ATN S + ++G G G V R + + K ++V K + ++
Sbjct: 3 TQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 61
Query: 453 DNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWN 512
+FL S M + HPNI+ L G + ++V EY+ NG+L L D T
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVI 118
Query: 513 ARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
V + G A ++YL ++ VHR+ + NIL++ L +SD GL+
Sbjct: 119 QLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLS 165
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 65/146 (44%), Gaps = 8/146 (5%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IG+G+ +V A GK +AVK ID L+ V L HPNIV L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
LV EY G + D L A K A+ R + A++Y H+ +
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYL-VAHGRXKEKEARAKFRQIVS---AVQYCHQ---KFI 134
Query: 537 VHRNFKSANILLDDELNPHLSDCGLA 562
VHR+ K+ N+LLD + N ++D G +
Sbjct: 135 VHRDLKAENLLLDADXNIKIADFGFS 160
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 12/172 (6%)
Query: 395 ITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANG---KIMAVKKIDNAALSLQE 451
+ A + V + F++ +IG G G VY + KI K N + E
Sbjct: 35 VQAVQHVVIGPSSLIVHFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 92
Query: 452 EDNFLEAVSNMSRLRHPNIVTLAGYCAE-HGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510
FL M HPN+++L G C G L+V Y+ +G+L + F + + N T
Sbjct: 93 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN---FIRNETHNPT 149
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ L A+ ++YL VHR+ + N +LD++ ++D GLA
Sbjct: 150 VKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLA 198
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 10/172 (5%)
Query: 396 TATSYTVASLQTATNSFSQEFLIGEGSLGRVY--RAEFANGKIMAVK-KIDNAALSLQEE 452
T T + A ATN S + ++G G G V R + + K ++V K + ++
Sbjct: 32 TQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 453 DNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWN 512
+FL S M + HPNI+ L G + ++V EY+ NG+L L D T
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVI 147
Query: 513 ARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
V + G A ++YL ++ VHR+ + NIL++ L +SD GL+ +
Sbjct: 148 QLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRV 196
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
IG+G G V ++ K+ AVK I N A + FL S M++LRH N+V L G
Sbjct: 14 IGKGEFGDVMLGDYRGNKV-AVKCIKNDATA----QAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 478 AEH-GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
E G +V EY+ G+L D L S L + ++ +L A+EYL +
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKFSLDVCEAMEYLEG---NNF 123
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
VHR+ + N+L+ ++ +SD GL +T+
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 156
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 12/172 (6%)
Query: 395 ITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANG---KIMAVKKIDNAALSLQE 451
+ A + V + F++ +IG G G VY + KI K N + E
Sbjct: 36 VQAVQHVVIGPSSLIVHFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 93
Query: 452 EDNFLEAVSNMSRLRHPNIVTLAGYCAE-HGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510
FL M HPN+++L G C G L+V Y+ +G+L + F + + N T
Sbjct: 94 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN---FIRNETHNPT 150
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ L A+ ++YL VHR+ + N +LD++ ++D GLA
Sbjct: 151 VKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLA 199
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMS 463
+ + S E +G+G G V+ + +A+K + +S + FL+ M
Sbjct: 12 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMK 68
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR 523
+LRH +V L +E +V EY+ G+L D L + K L V +A A
Sbjct: 69 KLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIAS 125
Query: 524 ALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
+ Y+ + + VHR+ +ANIL+ + L ++D GLA L + E
Sbjct: 126 GMAYVERM---NYVHRDLAAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 9/177 (5%)
Query: 389 KKIKSPITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKI-MAVKKIDNAAL 447
K+ K + S + + + +G G G VY + + +AVK + +
Sbjct: 196 KRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM 255
Query: 448 SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSK 507
++E FL+ + M ++HPN+V L G C ++ E++ GNL D L +
Sbjct: 256 EVEE---FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 312
Query: 508 NLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
N + +A + A+EYL + + +HRN + N L+ + ++D GL+ L
Sbjct: 313 NAV--VLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRL 364
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 12/172 (6%)
Query: 395 ITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANG---KIMAVKKIDNAALSLQE 451
+ A + V + F++ +IG G G VY + KI K N + E
Sbjct: 14 VQAVQHVVIGPSSLIVHFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 71
Query: 452 EDNFLEAVSNMSRLRHPNIVTLAGYCAE-HGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510
FL M HPN+++L G C G L+V Y+ +G+L + F + + N T
Sbjct: 72 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN---FIRNETHNPT 128
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ L A+ ++YL VHR+ + N +LD++ ++D GLA
Sbjct: 129 VKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLA 177
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
IG+G G V ++ K+ AVK I N A + FL S M++LRH N+V L G
Sbjct: 201 IGKGEFGDVMLGDYRGNKV-AVKCIKNDATA----QAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 478 AEH-GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
E G +V EY+ G+L D L S L + ++ +L A+EYL +
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKFSLDVCEAMEYLEG---NNF 310
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
VHR+ + N+L+ ++ +SD GL +T+
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 343
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 12/172 (6%)
Query: 395 ITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANG---KIMAVKKIDNAALSLQE 451
+ A + V + F++ +IG G G VY + KI K N + E
Sbjct: 9 VQAVQHVVIGPSSLIVHFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 66
Query: 452 EDNFLEAVSNMSRLRHPNIVTLAGYCAE-HGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510
FL M HPN+++L G C G L+V Y+ +G+L + F + + N T
Sbjct: 67 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN---FIRNETHNPT 123
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ L A+ ++YL VHR+ + N +LD++ ++D GLA
Sbjct: 124 VKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLA 172
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 10/172 (5%)
Query: 396 TATSYTVASLQTATNSFSQEFLIGEGSLGRVY--RAEFANGKIMAVK-KIDNAALSLQEE 452
T T + A ATN S + ++G G G V R + + K ++V K + ++
Sbjct: 32 TQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 453 DNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWN 512
+FL S M + HPNI+ L G + ++V EY+ NG+L L D T
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVI 147
Query: 513 ARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
V + G A ++YL ++ VHR+ + NIL++ L +SD GL+ +
Sbjct: 148 QLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRV 196
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 10/172 (5%)
Query: 396 TATSYTVASLQTATNSFSQEFLIGEGSLGRVY--RAEFANGKIMAVK-KIDNAALSLQEE 452
T T + A ATN S + ++G G G V R + + K ++V K + ++
Sbjct: 32 TQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 453 DNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWN 512
+FL S M + HPNI+ L G + ++V EY+ NG+L L D T
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVI 147
Query: 513 ARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
V + G A ++YL ++ VHR+ + NIL++ L +SD GL+ +
Sbjct: 148 QLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRV 196
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 12/172 (6%)
Query: 395 ITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANG---KIMAVKKIDNAALSLQE 451
+ A + V + F++ +IG G G VY + KI K N + E
Sbjct: 16 VQAVQHVVIGPSSLIVHFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 73
Query: 452 EDNFLEAVSNMSRLRHPNIVTLAGYCAE-HGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510
FL M HPN+++L G C G L+V Y+ +G+L + F + + N T
Sbjct: 74 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN---FIRNETHNPT 130
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ L A+ ++YL VHR+ + N +LD++ ++D GLA
Sbjct: 131 VKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLA 179
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 12/172 (6%)
Query: 395 ITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANG---KIMAVKKIDNAALSLQE 451
+ A + V + F++ +IG G G VY + KI K N + E
Sbjct: 17 VQAVQHVVIGPSSLIVHFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 74
Query: 452 EDNFLEAVSNMSRLRHPNIVTLAGYCAE-HGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510
FL M HPN+++L G C G L+V Y+ +G+L + F + + N T
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN---FIRNETHNPT 131
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ L A+ ++YL VHR+ + N +LD++ ++D GLA
Sbjct: 132 VKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 10/172 (5%)
Query: 396 TATSYTVASLQTATNSFSQEFLIGEGSLGRVY--RAEFANGKIMAVK-KIDNAALSLQEE 452
T T + A ATN S + ++G G G V R + + K ++V K + ++
Sbjct: 32 TQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 453 DNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWN 512
+FL S M + HPNI+ L G + ++V EY+ NG+L L D T
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVI 147
Query: 513 ARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
V + G A ++YL ++ VHR+ + NIL++ L +SD GL +
Sbjct: 148 QLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRV 196
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 10/172 (5%)
Query: 396 TATSYTVASLQTATNSFSQEFLIGEGSLGRVY--RAEFANGKIMAVK-KIDNAALSLQEE 452
T T + A ATN S + ++G G G V R + + K ++V K + ++
Sbjct: 32 TQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 453 DNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWN 512
+FL S M + HPNI+ L G + ++V EY+ NG+L L D T
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVI 147
Query: 513 ARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
V + G A ++YL ++ VHR+ + NIL++ L +SD GL+ +
Sbjct: 148 QLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRV 196
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 9/177 (5%)
Query: 389 KKIKSPITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKI-MAVKKIDNAAL 447
K+ K + S + + + +G G G VY + + +AVK + +
Sbjct: 238 KRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM 297
Query: 448 SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSK 507
++E FL+ + M ++HPN+V L G C ++ E++ GNL D L +
Sbjct: 298 EVEE---FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 354
Query: 508 NLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
N + +A + A+EYL + + +HRN + N L+ + ++D GL+ L
Sbjct: 355 NAV--VLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRL 406
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMS 463
Q A F +G+G G VY A K I+A+K + A L E V S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGT 521
LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 120
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL +++ G + P++ R + GT
Sbjct: 121 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGT 172
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 10/172 (5%)
Query: 396 TATSYTVASLQTATNSFSQEFLIGEGSLGRVY--RAEFANGKIMAVK-KIDNAALSLQEE 452
T T + A ATN S + ++G G G V R + + K ++V K + ++
Sbjct: 30 TQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 88
Query: 453 DNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWN 512
+FL S M + HPNI+ L G + ++V EY+ NG+L L D T
Sbjct: 89 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVI 145
Query: 513 ARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
V + G A ++YL ++ VHR+ + NIL++ L +SD GL+ +
Sbjct: 146 QLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRV 194
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 12/172 (6%)
Query: 395 ITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANG---KIMAVKKIDNAALSLQE 451
+ A + V + F++ +IG G G VY + KI K N + E
Sbjct: 15 VQAVQHVVIGPSSLIVHFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 72
Query: 452 EDNFLEAVSNMSRLRHPNIVTLAGYCAE-HGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510
FL M HPN+++L G C G L+V Y+ +G+L + F + + N T
Sbjct: 73 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN---FIRNETHNPT 129
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ L A+ ++YL VHR+ + N +LD++ ++D GLA
Sbjct: 130 VKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLA 178
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 12/172 (6%)
Query: 395 ITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANG---KIMAVKKIDNAALSLQE 451
+ A + V + F++ +IG G G VY + KI K N + E
Sbjct: 17 VQAVQHVVIGPSSLIVHFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 74
Query: 452 EDNFLEAVSNMSRLRHPNIVTLAGYCAE-HGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510
FL M HPN+++L G C G L+V Y+ +G+L + F + + N T
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN---FIRNETHNPT 131
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ L A+ ++YL VHR+ + N +LD++ ++D GLA
Sbjct: 132 VKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMS 463
Q A F +G+G G VY A K I+A+K + A L E V S
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGT 521
LRHPNI+ L GY + + L+ EY G ++ L D + T+ +
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 119
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
A AL Y H V+HR+ K N+LL +++ G + P++ R + GT
Sbjct: 120 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGT 171
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 417 LIGEGSLGRVYRAEFANG---KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL 473
+IG G G VY + KI K N + E FL M HPN+++L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 474 AGYCAE-HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
G C G L+V Y+ +G+L + F + + N T + L A+ ++YL
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRN---FIRNETHNPTVKDLIGFGLQVAKGMKYLAS-- 150
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA 562
VHR+ + N +LD++ ++D GLA
Sbjct: 151 -KKFVHRDLAARNCMLDEKFTVKVADFGLA 179
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 71/163 (43%), Gaps = 13/163 (7%)
Query: 418 IGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMSRLRHPNIVTLAG 475
+G+G G VY A K I+A+K + L E V S LRHPNI+ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGTARALEYLHEVCL 533
Y + + L+ EY G ++ L D + T+ + A AL Y H
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL------ANALSYCHS--- 130
Query: 534 PSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGT 173
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 12/172 (6%)
Query: 395 ITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANG---KIMAVKKIDNAALSLQE 451
+ A + V + F++ +IG G G VY + KI K N + E
Sbjct: 12 VQAVQHVVIGPSSLIVHFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 69
Query: 452 EDNFLEAVSNMSRLRHPNIVTLAGYCAE-HGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510
FL M HPN+++L G C G L+V Y+ +G+L + F + + N T
Sbjct: 70 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN---FIRNETHNPT 126
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ L A+ ++YL VHR+ + N +LD++ ++D GLA
Sbjct: 127 VKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLA 175
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 71/163 (43%), Gaps = 13/163 (7%)
Query: 418 IGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQE-EDNFLEAVSNMSRLRHPNIVTLAG 475
+G+G G VY A K I+A+K + L E V S LRHPNI+ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGTARALEYLHEVCL 533
Y + + L+ EY G ++ L D + T+ + A AL Y H
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL------ANALSYCHS--- 130
Query: 534 PSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
V+HR+ K N+LL ++D G + P++ R + GT
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGT 173
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 9/147 (6%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
IG GS G VY+ ++ +G + AVK + + ++ F V+ + + RH NI+ GY
Sbjct: 44 IGSGSFGTVYKGKW-HGDV-AVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ +V ++ +L+ LH + + + +A TA+ ++YLH +++
Sbjct: 102 TK-DNLAIVTQWCEGSSLYKHLHVQETKFQMF---QLIDIARQTAQGMDYLHA---KNII 154
Query: 538 HRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ KS NI L + L + D GLA +
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATV 181
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G G V+ + N +AVK + +S+Q FLE + M L+H +V L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQ---AFLEEANLMKTLQHDKLVRLYAVV 76
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ ++ E++ G+L D L +D+ K L + + A + Y+ + +
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLK-SDEGGKVLL-PKLIDFSAQIAEGMAYIER---KNYI 131
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
HR+ ++AN+L+ + L ++D GLA + + E
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNE 163
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 389 KKIKSPITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKI-MAVKKIDNAAL 447
K+ K I S + + + +G G G VY + + +AVK + +
Sbjct: 199 KRNKPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM 258
Query: 448 SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSK 507
++E FL+ + M ++HPN+V L G C ++ E++ GNL D L + + +
Sbjct: 259 EVEE---FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR--ECNRQ 313
Query: 508 NLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
++ + +A + A+EYL + + +HRN + N L+ + ++D GL+ L
Sbjct: 314 EVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRL 367
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 9/160 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G G V ++ +A+K I ++S ED F+E M L H +V L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ ++ EY+ NG L L++ + + + A+EYL +
Sbjct: 89 TKQRPIFIITEYMANGCL---LNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFL 142
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGTS 577
HR+ + N L++D+ +SD GL+ + E G+
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSK 182
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMS 463
+ + S E +G+G G V+ + +A+K + +S + FL+ M
Sbjct: 179 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMS---PEAFLQEAQVMK 235
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR 523
+LRH +V L +E +V EY+ G+L D L + K L V +A A
Sbjct: 236 KLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIAS 292
Query: 524 ALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
+ Y+ + + VHR+ ++ANIL+ + L ++D GL L + E
Sbjct: 293 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLGRLIEDNE 335
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 79/148 (53%), Gaps = 13/148 (8%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+GEG+ G VY+A+ + G+I+A+K+I A + +S + L HPNIV+L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 478 AEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARALEYLHEVCLP 534
H +R LV+E++ D+ D++ L ++++++ L R + + H+
Sbjct: 89 --HSERCLTLVFEFMEK----DLKKVLDENKTGLQ-DSQIKIYLYQLLRGVAHCHQ---H 138
Query: 535 SVVHRNFKSANILLDDELNPHLSDCGLA 562
++HR+ K N+L++ + L+D GLA
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLA 166
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 79/148 (53%), Gaps = 13/148 (8%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+GEG+ G VY+A+ + G+I+A+K+I A + +S + L HPNIV+L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 478 AEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARALEYLHEVCLP 534
H +R LV+E++ D+ D++ L ++++++ L R + + H+
Sbjct: 89 --HSERCLTLVFEFMEK----DLKKVLDENKTGLQ-DSQIKIYLYQLLRGVAHCHQ---H 138
Query: 535 SVVHRNFKSANILLDDELNPHLSDCGLA 562
++HR+ K N+L++ + L+D GLA
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLA 166
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 9/152 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G G V ++ +A+K I ++S ED F+E M L H +V L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ ++ EY+ NG L L++ + + + A+EYL +
Sbjct: 89 TKQRPIFIITEYMANGCL---LNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFL 142
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
HR+ + N L++D+ +SD GL+ + E
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 9/152 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G G V ++ +A+K I ++S ED F+E M L H +V L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ ++ EY+ NG L L++ + + + A+EYL +
Sbjct: 80 TKQRPIFIITEYMANGCL---LNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFL 133
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
HR+ + N L++D+ +SD GL+ + E
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 165
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 9/152 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G G V ++ +A+K I ++S ED F+E M L H +V L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ ++ EY+ NG L L++ + + + A+EYL +
Sbjct: 74 TKQRPIFIITEYMANGCL---LNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFL 127
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
HR+ + N L++D+ +SD GL+ + E
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 159
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 9/152 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G G V ++ +A+K I ++S ED F+E M L H +V L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ ++ EY+ NG L L++ + + + A+EYL +
Sbjct: 74 TKQRPIFIITEYMANGCL---LNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFL 127
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
HR+ + N L++D+ +SD GL+ + E
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 159
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 9/152 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G G V ++ +A+K I ++S ED F+E M L H +V L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ ++ EY+ NG L L++ + + + A+EYL +
Sbjct: 69 TKQRPIFIITEYMANGCL---LNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFL 122
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
HR+ + N L++D+ +SD GL+ + E
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 154
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 9/152 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G G V ++ +A+K I ++S ED F+E M L H +V L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ ++ EY+ NG L L++ + + + A+EYL +
Sbjct: 73 TKQRPIFIITEYMANGCL---LNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFL 126
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
HR+ + N L++D+ +SD GL+ + E
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 158
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 417 LIGEGSLGRVYRAEFANG---KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL 473
+IG G G VY + KI K N + E FL M HPN+++L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 474 AGYCAE-HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
G C G L+V Y+ +G+L + F + + N T + L A+ +++L
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRN---FIRNETHNPTVKDLIGFGLQVAKGMKFLAS-- 210
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA 562
VHR+ + N +LD++ ++D GLA
Sbjct: 211 -KKFVHRDLAARNCMLDEKFTVKVADFGLA 239
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 12/172 (6%)
Query: 395 ITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANG---KIMAVKKIDNAALSLQE 451
+ A + V + F++ +IG G G VY + KI K N + E
Sbjct: 22 VQAVQHVVIGPSSLIVHFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 79
Query: 452 EDNFLEAVSNMSRLRHPNIVTLAGYCAE-HGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510
FL M HPN+++L G C G L+V Y+ +G+L + F + + N T
Sbjct: 80 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN---FIRNETHNPT 136
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ L A+ +++L VHR+ + N +LD++ ++D GLA
Sbjct: 137 VKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLA 185
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 413 SQEFLIGEGSLGRVYRA--EFANGKI---MAVKKIDNAALSLQEEDNFLEAVSNMSRLRH 467
+++ +IG G G VY+ + ++GK +A+K + A + ++ +FL M + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTL-KAGYTEKQRVDFLGEAGIMGQFSH 105
Query: 468 PNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEY 527
NI+ L G +++ +++ EY+ NG L L D L +R G A ++Y
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGMKY 162
Query: 528 LHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
L + + VHR+ + NIL++ L +SD GL+
Sbjct: 163 LANM---NYVHRDLAARNILVNSNLVCKVSDFGLS 194
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 12/172 (6%)
Query: 395 ITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANG---KIMAVKKIDNAALSLQE 451
+ A + V + F++ +IG G G VY + KI K N + E
Sbjct: 18 VQAVQHVVIGPSSLIVHFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 75
Query: 452 EDNFLEAVSNMSRLRHPNIVTLAGYCAE-HGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510
FL M HPN+++L G C G L+V Y+ +G+L + F + + N T
Sbjct: 76 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN---FIRNETHNPT 132
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ L A+ +++L VHR+ + N +LD++ ++D GLA
Sbjct: 133 VKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLA 181
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 12/172 (6%)
Query: 395 ITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANG---KIMAVKKIDNAALSLQE 451
+ A + V + F++ +IG G G VY + KI K N + E
Sbjct: 17 VQAVQHVVIGPSSLIVHFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 74
Query: 452 EDNFLEAVSNMSRLRHPNIVTLAGYCAE-HGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510
FL M HPN+++L G C G L+V Y+ +G+L + F + + N T
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN---FIRNETHNPT 131
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ L A+ +++L VHR+ + N +LD++ ++D GLA
Sbjct: 132 VKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G G VY + + +AVK + + ++E FL+ + M ++HPN+V L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 82
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
C ++ E++ GNL D L + N + +A + A+EYL + +
Sbjct: 83 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEK---KNF 137
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
+HR+ + N L+ + ++D GL+ L
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRL 165
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G G VY + + +AVK + + ++E FL+ + M ++HPN+V L G
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 78
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
C ++ E++ GNL D L + N + +A + A+EYL + +
Sbjct: 79 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEK---KNF 133
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
+HR+ + N L+ + ++D GL+ L
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRL 161
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 12/172 (6%)
Query: 395 ITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANG---KIMAVKKIDNAALSLQE 451
+ A + V + F++ +IG G G VY + KI K N + E
Sbjct: 15 VQAVQHVVIGPSSLIVHFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 72
Query: 452 EDNFLEAVSNMSRLRHPNIVTLAGYCAE-HGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510
FL M HPN+++L G C G L+V Y+ +G+L + F + + N T
Sbjct: 73 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN---FIRNETHNPT 129
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ L A+ +++L VHR+ + N +LD++ ++D GLA
Sbjct: 130 VKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLA 178
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 12/172 (6%)
Query: 395 ITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANG---KIMAVKKIDNAALSLQE 451
+ A + V + F++ +IG G G VY + KI K N + E
Sbjct: 18 VQAVQHVVIGPSSLIVHFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 75
Query: 452 EDNFLEAVSNMSRLRHPNIVTLAGYCAE-HGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510
FL M HPN+++L G C G L+V Y+ +G+L + F + + N T
Sbjct: 76 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN---FIRNETHNPT 132
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ L A+ +++L VHR+ + N +LD++ ++D GLA
Sbjct: 133 VKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLA 181
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G G VY + + +AVK + + ++E FL+ + M ++HPN+V L G
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 78
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
C ++ E++ GNL D L + N + +A + A+EYL + +
Sbjct: 79 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEK---KNF 133
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
+HR+ + N L+ + ++D GL+ L
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRL 161
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G G VY + + +AVK + + ++E FL+ + M ++HPN+V L G
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 96
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
C +V EY+ GNL D L + + + +T + +A + A+EYL + +
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYLR--ECNREEVTAVVLLYMATQISSAMEYLEK---KNF 151
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
+HR+ + N L+ + ++D GL+ L
Sbjct: 152 IHRDLAARNCLVGENHVVKVADFGLSRL 179
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 74/167 (44%), Gaps = 17/167 (10%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAG 475
+GEG V E +G A+K+I Q++ + ++M RL HPNI+ L
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRI---LCHEQQDREEAQREADMHRLFNHPNILRLVA 93
Query: 476 YC-----AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE 530
YC A+H LL+ + G L + + D LT + + + LG R LE +H
Sbjct: 94 YCLRERGAKHEAWLLL-PFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA 152
Query: 531 VCLPSVVHRNFKSANILLDDELNPHLSDCG---LAALTPNTERQVIT 574
HR+ K NILL DE P L D G A + RQ +T
Sbjct: 153 ---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALT 196
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G G VY + + +AVK + + ++E FL+ + M ++HPN+V L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 77
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
C ++ E++ GNL D L + N + +A + A+EYL + +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEK---KNF 132
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
+HR+ + N L+ + ++D GL+ L
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRL 160
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 12/172 (6%)
Query: 395 ITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANG---KIMAVKKIDNAALSLQE 451
+ A + V + F++ +IG G G VY + KI K N + E
Sbjct: 17 VQAVQHVVIGPSSLIVHFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 74
Query: 452 EDNFLEAVSNMSRLRHPNIVTLAGYCAE-HGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510
FL M HPN+++L G C G L+V Y+ +G+L + F + + N T
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN---FIRNETHNPT 131
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ L A+ +++L VHR+ + N +LD++ ++D GLA
Sbjct: 132 VKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G G VY + + +AVK + + ++E FL+ + M ++HPN+V L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 82
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
C ++ E++ GNL D L + N + +A + A+EYL + +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEK---KNF 137
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
+HR+ + N L+ + ++D GL+ L
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRL 165
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G G VY + + +AVK + + ++E FL+ + M ++HPN+V L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 82
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
C ++ E++ GNL D L + N + +A + A+EYL + +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEK---KNF 137
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
+HR+ + N L+ + ++D GL+ L
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRL 165
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G G VY + + +AVK + + ++E FL+ + M ++HPN+V L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 82
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
C ++ E++ GNL D L + N + +A + A+EYL + +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEK---KNF 137
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
+HR+ + N L+ + ++D GL+ L
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRL 165
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G G VY + + +AVK + + ++E FL+ + M ++HPN+V L G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 79
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
C ++ E++ GNL D L + N + +A + A+EYL + +
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEK---KNF 134
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
+HR+ + N L+ + ++D GL+ L
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRL 162
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G G VY + + +AVK + + ++E FL+ + M ++HPN+V L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 77
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
C ++ E++ GNL D L + N + +A + A+EYL + +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEK---KNF 132
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
+HR+ + N L+ + ++D GL+ L
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRL 160
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G G VY + + +AVK + + ++E FL+ + M ++HPN+V L G
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 90
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
C ++ E++ GNL D L + N + +A + A+EYL + +
Sbjct: 91 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEK---KNF 145
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
+HR+ + N L+ + ++D GL+ L
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRL 173
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 11/156 (7%)
Query: 412 FSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEE-DNFLEAVSNMSRLRHPN 469
FS IG GS G VY A + N +++A+KK+ + E+ + ++ V + +LRHPN
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 470 IVTLAG-YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+ G Y EH LV EY G+ D+L + + A V G + L YL
Sbjct: 116 TIQYRGCYLREHTA-WLVMEYC-LGSASDLLEVHKKPLQEVEIAA---VTHGALQGLAYL 170
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
H +++HR+ K+ NILL + L D G A++
Sbjct: 171 HS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASI 203
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G G VY + + +AVK + + ++E FL+ + M ++HPN+V L G
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 81
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
C ++ E++ GNL D L + N + +A + A+EYL + +
Sbjct: 82 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEK---KNF 136
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
+HR+ + N L+ + ++D GL+ L
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRL 164
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G G VY + + +AVK + + ++E FL+ + M ++HPN+V L G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 79
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
C ++ E++ GNL D L + N + +A + A+EYL + +
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEK---KNF 134
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
+HR+ + N L+ + ++D GL+ L
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRL 162
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G G VY + + +AVK + + ++E FL+ + M ++HPN+V L G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 79
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
C ++ E++ GNL D L + N + +A + A+EYL + +
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEK---KNF 134
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
+HR+ + N L+ + ++D GL+ L
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRL 162
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 418 IGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAG 475
+G G+ G+V E G +AVK ++ + SL + N+ RHP+I+ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
+ +V EYV G L D + + AR R+ A++Y H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFD---YICKHGRVEEMEAR-RLFQQILSAVDYCHR---HM 131
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
VVHR+ K N+LLD +N ++D GL+ + + E
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 418 IGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAG 475
+G G+ G+V E G +AVK ++ + SL + N+ RHP+I+ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
+ +V EYV G L D + + AR R+ A++Y H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFD---YICKHGRVEEMEAR-RLFQQILSAVDYCHR---HM 131
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
VVHR+ K N+LLD +N ++D GL+ + + E
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 11/156 (7%)
Query: 412 FSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEE-DNFLEAVSNMSRLRHPN 469
FS IG GS G VY A + N +++A+KK+ + E+ + ++ V + +LRHPN
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 470 IVTLAG-YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+ G Y EH LV EY G+ D+L + + A V G + L YL
Sbjct: 77 TIQYRGCYLREHTA-WLVMEYC-LGSASDLLEVHKKPLQEVEIAA---VTHGALQGLAYL 131
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
H +++HR+ K+ NILL + L D G A++
Sbjct: 132 HS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASI 164
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G G VY + + +AVK + + ++E FL+ + M ++HPN+V L G
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 75
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
C ++ E++ GNL D L + + + ++ + +A + A+EYL + +
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLR--ECNRQEVSAVVLLYMATQISSAMEYLEK---KNF 130
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
+HR+ + N L+ + ++D GL+ L
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRL 158
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 10/170 (5%)
Query: 396 TATSYTVASLQTATNSFSQEFLIGEGSLGRVY--RAEFANGKIMAVK-KIDNAALSLQEE 452
T T + A ATN S + ++G G G V R + + K ++V K + ++
Sbjct: 32 TQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 453 DNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWN 512
+FL S M + HPNI+ L G + ++V E + NG+L L D T
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD---AQFTVI 147
Query: 513 ARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
V + G A ++YL ++ VHR+ + NIL++ L +SD GL+
Sbjct: 148 QLVGMLRGIASGMKYLSDM---GAVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 418 IGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
+G+G+ G V + G+++AVKK+ ++ + + +F + + L+H NIV
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 76
Query: 473 LAGYCAEHGQR--LLVYEYVGNGNLHDMLHFAD---DSSKNLTWNARVRVALGTARALEY 527
G C G+R L+ EY+ G+L D L D K L + +++ + +EY
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 130
Query: 528 LHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567
L +HRN + NIL+++E + D GL + P
Sbjct: 131 L---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQ 167
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 10/170 (5%)
Query: 396 TATSYTVASLQTATNSFSQEFLIGEGSLGRVY--RAEFANGKIMAVK-KIDNAALSLQEE 452
T T + A ATN S + ++G G G V R + + K ++V K + ++
Sbjct: 3 TQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 61
Query: 453 DNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWN 512
+FL S M + HPNI+ L G + ++V E + NG+L L D T
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD---AQFTVI 118
Query: 513 ARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
V + G A ++YL ++ VHR+ + NIL++ L +SD GL+
Sbjct: 119 QLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLS 165
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G G VY + + +AVK + + ++E FL+ + M ++HPN+V L G
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 75
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
C ++ E++ GNL D L + + + ++ + +A + A+EYL + +
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYLR--ECNRQEVSAVVLLYMATQISSAMEYLEK---KNF 130
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
+HR+ + N L+ + ++D GL+ L
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRL 158
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G G VY + + +AVK + + ++E FL+ + M ++HPN+V L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 77
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
C ++ E++ GNL D L + + + ++ + +A + A+EYL + +
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLR--ECNRQEVSAVVLLYMATQISSAMEYLEK---KNF 132
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
+HR+ + N L+ + ++D GL+ L
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRL 160
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G G VY + + +AVK + + ++E FL+ + M ++HPN+V L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 77
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
C ++ E++ GNL D L + + + ++ + +A + A+EYL + +
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLR--ECNRQEVSAVVLLYMATQISSAMEYLEK---KNF 132
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
+HR+ + N L+ + ++D GL+ L
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRL 160
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 30/171 (17%)
Query: 418 IGEGSLGRVYRAE------FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471
IGEG+ GRV++A + ++AVK + A S + +F + M+ +PNIV
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIV 113
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLH------FADDSSKNLTWNARVR--------- 516
L G CA L++EY+ G+L++ L S +L+ ARV
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 517 -----VALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+A A + YL E VHR+ + N L+ + + ++D GL+
Sbjct: 174 AEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLS 221
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 10/172 (5%)
Query: 396 TATSYTVASLQTATNSFSQEFLIGEGSLGRVY--RAEFANGKIMAVK-KIDNAALSLQEE 452
T T + A ATN S + ++G G G V R + + K ++V K + ++
Sbjct: 32 TQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 453 DNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWN 512
+FL S M + HPNI+ L G + ++V E + NG+L L D T
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD---AQFTVI 147
Query: 513 ARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
V + G A ++YL ++ VHR+ + NIL++ L +SD GL+ +
Sbjct: 148 QLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRV 196
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G G VY + + +AVK + + ++E FL+ + M ++HPN+V L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 77
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
C ++ E++ GNL D L + + + ++ + +A + A+EYL + +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLR--ECNRQEVSAVVLLYMATQISSAMEYLEK---KNF 132
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
+HR+ + N L+ + ++D GL+ L
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRL 160
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G G VY + + +AVK + + ++E FL+ + M ++HPN+V L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 77
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
C ++ E++ GNL D L + + + ++ + +A + A+EYL + +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLR--ECNRQEVSAVVLLYMATQISSAMEYLEK---KNF 132
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
+HR+ + N L+ + ++D GL+ L
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRL 160
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G G VY + + +AVK + + ++E FL+ + M ++HPN+V L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 82
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
C ++ E++ GNL D L + + + ++ + +A + A+EYL + +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLR--ECNRQEVSAVVLLYMATQISSAMEYLEK---KNF 137
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
+HR+ + N L+ + ++D GL+ L
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRL 165
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 81/184 (44%), Gaps = 20/184 (10%)
Query: 404 SLQTATNSFSQEF----LIGEGSLGRVYRAE-FANGKIMAVKKIDNAAL----SLQEEDN 454
SL T ++F L+G+GS VYRAE G +A+K ID A+ +Q N
Sbjct: 1 SLATCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQN 60
Query: 455 FLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNAR 514
V +L+HP+I+ L Y + LV E NG +M + + K + N
Sbjct: 61 ---EVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNG---EMNRYLKNRVKPFSENEA 114
Query: 515 VRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL--TPNTERQV 572
+ YLH ++HR+ +N+LL +N ++D GLA P+ +
Sbjct: 115 RHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT 171
Query: 573 ITGT 576
+ GT
Sbjct: 172 LCGT 175
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G G VY + + +AVK + + ++E FL+ + M ++HPN+V L G
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 75
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
C ++ E++ GNL D L + + + ++ + +A + A+EYL + +
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLR--ECNRQEVSAVVLLYMATQISSAMEYLEK---KNF 130
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
+HR+ + N L+ + ++D GL+ L
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRL 158
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 20/155 (12%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEA-VSNMSRLRHPNIVT-LAG 475
IG+G G V+R ++ G+ +AVK S +E F EA + LRH NI+ +A
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFS----SREERSWFREAEIYQTVMLRHENILGFIAA 104
Query: 476 YCAEHG---QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
++G Q LV +Y +G+L D L + +T +++AL TA L +LH
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHMEI 159
Query: 533 L-----PSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ P++ HR+ KS NIL+ ++D GLA
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 28/158 (17%)
Query: 418 IGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDN------FLEAVSNMSRLRHPNI 470
IGEGS G V++ + G+I+A+KK L+ ED+ L + + +L+HPN+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKF------LESEDDPVIKKIALREIRMLKQLKHPNL 64
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHF----ADDSSKNLTWNARVRVALGTARALE 526
V L + LV+EY + LH++ + + K++TW T +A+
Sbjct: 65 VNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ--------TLQAVN 116
Query: 527 YLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
+ H+ + +HR+ K NIL+ L D G A L
Sbjct: 117 FCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARL 151
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 23/179 (12%)
Query: 399 SYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEED 453
S+ + + F Q+ +G+G+ G V + G+++AVKK+ ++ + +
Sbjct: 19 SHNMTQFEERHLKFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLR 74
Query: 454 NFLEAVSNMSRLRHPNIVTLAGYCAEHGQR--LLVYEYVGNGNLHDMLHFAD---DSSKN 508
+F + + L+H NIV G C G+R L+ EY+ G+L D L D K
Sbjct: 75 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 134
Query: 509 LTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567
L + +++ + +EYL +HR+ + NIL+++E + D GL + P
Sbjct: 135 LQYTSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 184
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 23/179 (12%)
Query: 399 SYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEED 453
S+ + + F Q+ +G+G+ G V + G+++AVKK+ ++ + +
Sbjct: 19 SHNMTQFEERHLKFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLR 74
Query: 454 NFLEAVSNMSRLRHPNIVTLAGYCAEHGQR--LLVYEYVGNGNLHDMLHFAD---DSSKN 508
+F + + L+H NIV G C G+R L+ EY+ G+L D L D K
Sbjct: 75 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 134
Query: 509 LTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567
L + +++ + +EYL +HR+ + NIL+++E + D GL + P
Sbjct: 135 LQYTSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 184
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 20/155 (12%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEA-VSNMSRLRHPNIVT-LAG 475
IG+G G V+R ++ G+ +AVK S +E F EA + LRH NI+ +A
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFS----SREERSWFREAEIYQTVMLRHENILGFIAA 91
Query: 476 YCAEHG---QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
++G Q LV +Y +G+L D L + +T +++AL TA L +LH
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHMEI 146
Query: 533 L-----PSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ P++ HR+ KS NIL+ ++D GLA
Sbjct: 147 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 181
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Query: 415 EFLIGEGSLGRVYRAEF---ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471
E +IG G G V +I K A + ++ +FL S M + HPNI+
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV 531
L G + +++ EY+ NG+L L D + +R G ++YL ++
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMKYLSDM 150
Query: 532 CLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
S VHR+ + NIL++ L +SD G++ +
Sbjct: 151 ---SAVHRDLAARNILVNSNLVCKVSDFGMSRV 180
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNF----LEA 458
+++ + + +GEG VY+A N +I+A+KKI S + +D L
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRS-EAKDGINRTALRE 62
Query: 459 VSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVA 518
+ + L HPNI+ L LV++++ D+ D+S LT +
Sbjct: 63 IKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET----DLEVIIKDNSLVLTPSHIKAYM 118
Query: 519 LGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
L T + LEYLH+ ++HR+ K N+LLD+ L+D GLA
Sbjct: 119 LMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLA 159
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 79/187 (42%), Gaps = 21/187 (11%)
Query: 390 KIKSP-ITATSYTVASLQTATNSFSQEF---------LIGEGSLGRV----YRAEFANGK 435
K+ P A +T A SF++E +IG G G V R
Sbjct: 19 KLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDV 78
Query: 436 IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNL 495
+A+K + A + ++ +FL S M + HPNI+ L G ++V EY+ NG+L
Sbjct: 79 PVAIKAL-KAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL 137
Query: 496 HDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPH 555
L D T V + G + YL ++ VHR+ + N+L+D L
Sbjct: 138 DTFLRTHDG---QFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCK 191
Query: 556 LSDCGLA 562
+SD GL+
Sbjct: 192 VSDFGLS 198
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 79/187 (42%), Gaps = 21/187 (11%)
Query: 390 KIKSP-ITATSYTVASLQTATNSFSQEF---------LIGEGSLGRV----YRAEFANGK 435
K+ P A +T A SF++E +IG G G V R
Sbjct: 19 KLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDV 78
Query: 436 IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNL 495
+A+K + A + ++ +FL S M + HPNI+ L G ++V EY+ NG+L
Sbjct: 79 PVAIKAL-KAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL 137
Query: 496 HDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPH 555
L D T V + G + YL ++ VHR+ + N+L+D L
Sbjct: 138 DTFLRTHDG---QFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCK 191
Query: 556 LSDCGLA 562
+SD GL+
Sbjct: 192 VSDFGLS 198
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 18/159 (11%)
Query: 417 LIGEGSLGRVY----RAEFANGKIMAVK--KIDNAALSLQEEDNFLEAVSNMSRLRHPNI 470
++GEG G V + E +AVK K+DN+ S +E + FL + M HPN+
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS--SQREIEEFLSEAACMKDFSHPNV 98
Query: 471 VTLAGYCAEHGQR-----LLVYEYVGNGNLHDMLHFA--DDSSKNLTWNARVRVALGTAR 523
+ L G C E + +++ ++ G+LH L ++ + K++ ++ + A
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158
Query: 524 ALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+EYL + +HR+ + N +L D++ ++D GL+
Sbjct: 159 GMEYLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLS 194
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 24/163 (14%)
Query: 418 IGEGSLGRVYRAEF------ANGKIMAVKKI-DNAALSLQEEDNFLEAVSNMSRLRHPNI 470
+GE G+VY+ + +A+K + D A L+EE F +RL+HPN+
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREE--FRHEAMLRARLQHPNV 91
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFA----------DDSSKN--LTWNARVRVA 518
V L G + +++ Y +G+LH+ L DD + L V +
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 519 LGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561
A +EYL VVH++ + N+L+ D+LN +SD GL
Sbjct: 152 AQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNVKISDLGL 191
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 20/155 (12%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEA-VSNMSRLRHPNIVT-LAG 475
IG+G G V+R ++ G+ +AVK S +E F EA + LRH NI+ +A
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFS----SREERSWFREAEIYQTVMLRHENILGFIAA 71
Query: 476 YCAEHG---QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
++G Q LV +Y +G+L D L + +T +++AL TA L +LH
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHMEI 126
Query: 533 L-----PSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ P++ HR+ KS NIL+ ++D GLA
Sbjct: 127 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 161
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 418 IGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
+G+G+ G V + G+++AVKK+ ++ + + +F + + L+H NIV
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 106
Query: 473 LAGYCAEHGQR--LLVYEYVGNGNLHDMLHFAD---DSSKNLTWNARVRVALGTARALEY 527
G C G+R L+ EY+ G+L D L D K L + +++ + +EY
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 160
Query: 528 LHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567
L +HR+ + NIL+++E + D GL + P
Sbjct: 161 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 17/150 (11%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDN-----FLEAVSNMSRLRHPNIVT 472
IGEG+ G VY+A+ G+ A+KKI L++ED + +S + L+H NIV
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI-----RLEKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 473 LAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
L + +LV+E++ + +L +L + +++T + L + Y H+
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKS---FLLQLLNGIAYCHD-- 118
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA 562
V+HR+ K N+L++ E ++D GLA
Sbjct: 119 -RRVLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 20/155 (12%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEA-VSNMSRLRHPNIVT-LAG 475
IG+G G V+R ++ G+ +AVK S +E F EA + LRH NI+ +A
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFS----SREERSWFREAEIYQTVMLRHENILGFIAA 66
Query: 476 YCAEHG---QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
++G Q LV +Y +G+L D L + +T +++AL TA L +LH
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHMEI 121
Query: 533 L-----PSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ P++ HR+ KS NIL+ ++D GLA
Sbjct: 122 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 156
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 17/150 (11%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDN-----FLEAVSNMSRLRHPNIVT 472
IGEG+ G VY+A+ G+ A+KKI L++ED + +S + L+H NIV
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI-----RLEKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 473 LAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
L + +LV+E++ + +L +L + +++T + L + Y H+
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKS---FLLQLLNGIAYCHD-- 118
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA 562
V+HR+ K N+L++ E ++D GLA
Sbjct: 119 -RRVLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 24/163 (14%)
Query: 418 IGEGSLGRVYRAEF------ANGKIMAVKKI-DNAALSLQEEDNFLEAVSNMSRLRHPNI 470
+GE G+VY+ + +A+K + D A L+EE F +RL+HPN+
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREE--FRHEAMLRARLQHPNV 74
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFA----------DDSSKN--LTWNARVRVA 518
V L G + +++ Y +G+LH+ L DD + L V +
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 519 LGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561
A +EYL VVH++ + N+L+ D+LN +SD GL
Sbjct: 135 AQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNVKISDLGL 174
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 20/155 (12%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEA-VSNMSRLRHPNIVT-LAG 475
IG+G G V+R ++ G+ +AVK S +E F EA + LRH NI+ +A
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFS----SREERSWFREAEIYQTVMLRHENILGFIAA 68
Query: 476 YCAEHG---QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
++G Q LV +Y +G+L D L + +T +++AL TA L +LH
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHMEI 123
Query: 533 L-----PSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ P++ HR+ KS NIL+ ++D GLA
Sbjct: 124 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 158
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 17/150 (11%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDN-----FLEAVSNMSRLRHPNIVT 472
IGEG+ G VY+A+ G+ A+KKI L++ED + +S + L+H NIV
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI-----RLEKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 473 LAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
L + +LV+E++ + +L +L + +++T + L + Y H+
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKS---FLLQLLNGIAYCHD-- 118
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA 562
V+HR+ K N+L++ E ++D GLA
Sbjct: 119 -RRVLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Query: 415 EFLIGEGSLGRVYRAEF---ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471
E +IG G G V +I K A + ++ +FL S M + HPNI+
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV 531
L G + +++ EY+ NG+L L D T V + G ++YL ++
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG---RFTVIQLVGMLRGIGSGMKYLSDM 129
Query: 532 CLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
S VHR+ + NIL++ L +SD G++ +
Sbjct: 130 ---SYVHRDLAARNILVNSNLVCKVSDFGMSRV 159
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 30/164 (18%)
Query: 418 IGEGSLGRV--YRAEFAN---GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
+GEG G+V Y + N G+++AVK + A Q + + + + L H +I+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 473 LAGYCAEHGQR--LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE 530
G C + G++ LV EYV G+L D L R ++G A+ L + +
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYL---------------PRHSIGLAQLLLFAQQ 125
Query: 531 VC-------LPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567
+C +HRN + N+LLD++ + D GLA P
Sbjct: 126 ICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE 169
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 418 IGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
+G+G+ G V + G+++AVKK+ ++ + + +F + + L+H NIV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 75
Query: 473 LAGYCAEHGQR--LLVYEYVGNGNLHDMLHFAD---DSSKNLTWNARVRVALGTARALEY 527
G C G+R L+ EY+ G+L D L D K L + +++ + +EY
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 129
Query: 528 LHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567
L +HR+ + NIL+++E + D GL + P
Sbjct: 130 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 20/155 (12%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEA-VSNMSRLRHPNIVT-LAG 475
IG+G G V+R ++ G+ +AVK S +E F EA + LRH NI+ +A
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFS----SREERSWFREAEIYQTVMLRHENILGFIAA 65
Query: 476 YCAEHG---QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
++G Q LV +Y +G+L D L + +T +++AL TA L +LH
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHMEI 120
Query: 533 L-----PSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ P++ HR+ KS NIL+ ++D GLA
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 415 EFLIGEGSLGRVYRAEFA-NGK---IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNI 470
E +IG G G V GK +A+K + + Q D FL S M + HPN+
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRD-FLSEASIMGQFDHPNV 96
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE 530
+ L G + +++ E++ NG+L L D + +R G A ++YL +
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYLAD 153
Query: 531 VCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ + VHR+ + NIL++ L +SD GL+
Sbjct: 154 M---NYVHRDLAARNILVNSNLVCKVSDFGLS 182
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 418 IGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
+G+G+ G V + G+++AVKK+ ++ + + +F + + L+H NIV
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 82
Query: 473 LAGYCAEHGQR--LLVYEYVGNGNLHDMLHFAD---DSSKNLTWNARVRVALGTARALEY 527
G C G+R L+ EY+ G+L D L D K L + +++ + +EY
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 136
Query: 528 LHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567
L +HR+ + NIL+++E + D GL + P
Sbjct: 137 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 173
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEED----NFLEAVSNMSRLR----HPN 469
+GEG+ G+V AE K+ A+ + ++D + + VS M ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDML--------HFADD----SSKNLTWNARVRV 517
I+TL G C + G ++ EY GNL + L ++ D + +T+ V
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 518 ALGTARALEYL-HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
AR +EYL + C +HR+ + N+L+ + ++D GLA
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Query: 415 EFLIGEGSLGRVYRAEF---ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471
E +IG G G V +I K A + ++ +FL S M + HPNI+
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV 531
L G + +++ EY+ NG+L L D + +R G ++YL ++
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMKYLSDM 135
Query: 532 CLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
S VHR+ + NIL++ L +SD G++ +
Sbjct: 136 ---SYVHRDLAARNILVNSNLVCKVSDFGMSRV 165
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 418 IGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
+G+G+ G V + G+++AVKK+ ++ + + +F + + L+H NIV
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 80
Query: 473 LAGYCAEHGQR--LLVYEYVGNGNLHDMLHFAD---DSSKNLTWNARVRVALGTARALEY 527
G C G+R L+ EY+ G+L D L D K L + +++ + +EY
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 134
Query: 528 LHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567
L +HR+ + NIL+++E + D GL + P
Sbjct: 135 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 171
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 418 IGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
+G+G+ G V + G+++AVKK+ ++ + + +F + + L+H NIV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 75
Query: 473 LAGYCAEHGQR--LLVYEYVGNGNLHDMLHFAD---DSSKNLTWNARVRVALGTARALEY 527
G C G+R L+ EY+ G+L D L D K L + +++ + +EY
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 129
Query: 528 LHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567
L +HR+ + NIL+++E + D GL + P
Sbjct: 130 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 30/164 (18%)
Query: 418 IGEGSLGRV--YRAEFAN---GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
+GEG G+V Y + N G+++AVK + A Q + + + + L H +I+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 473 LAGYCAEHGQR--LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE 530
G C + G++ LV EYV G+L D L R ++G A+ L + +
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYL---------------PRHSIGLAQLLLFAQQ 125
Query: 531 VCL-------PSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567
+C +HRN + N+LLD++ + D GLA P
Sbjct: 126 ICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE 169
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 418 IGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
+G+G+ G V + G+++AVKK+ ++ + + +F + + L+H NIV
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 81
Query: 473 LAGYCAEHGQR--LLVYEYVGNGNLHDMLHFAD---DSSKNLTWNARVRVALGTARALEY 527
G C G+R L+ EY+ G+L D L D K L + +++ + +EY
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 135
Query: 528 LHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567
L +HR+ + NIL+++E + D GL + P
Sbjct: 136 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 172
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 418 IGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
+G+G+ G V + G+++AVKK+ ++ + + +F + + L+H NIV
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 73
Query: 473 LAGYCAEHGQR--LLVYEYVGNGNLHDMLHFAD---DSSKNLTWNARVRVALGTARALEY 527
G C G+R L+ EY+ G+L D L D K L + +++ + +EY
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 127
Query: 528 LHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567
L +HR+ + NIL+++E + D GL + P
Sbjct: 128 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 164
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 26/160 (16%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEA-VSNMSRLRHPNIVTLAGY 476
+G+G G V+R +G+ +AVK S E+ F E + N LRH NI+ G+
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFS----SRDEQSWFRETEIYNTVLLRHDNIL---GF 67
Query: 477 CAEH-------GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH 529
A Q L+ Y +G+L+D L + L + +R+A+ A L +LH
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQ-----RQTLEPHLALRLAVSAACGLAHLH 122
Query: 530 EVCL-----PSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
P++ HR+FKS N+L+ L ++D GLA +
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVM 162
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 418 IGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
+G+G+ G V + G+++AVKK+ ++ + + +F + + L+H NIV
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 79
Query: 473 LAGYCAEHGQR--LLVYEYVGNGNLHDMLHFAD---DSSKNLTWNARVRVALGTARALEY 527
G C G+R L+ EY+ G+L D L D K L + +++ + +EY
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 133
Query: 528 LHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567
L +HR+ + NIL+++E + D GL + P
Sbjct: 134 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 170
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 418 IGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
+G+G+ G V + G+++AVKK+ ++ + + +F + + L+H NIV
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 78
Query: 473 LAGYCAEHGQR--LLVYEYVGNGNLHDMLHFAD---DSSKNLTWNARVRVALGTARALEY 527
G C G+R L+ EY+ G+L D L D K L + +++ + +EY
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 132
Query: 528 LHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567
L +HR+ + NIL+++E + D GL + P
Sbjct: 133 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 169
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 418 IGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
+G+G+ G V + G+++AVKK+ ++ + + +F + + L+H NIV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 75
Query: 473 LAGYCAEHGQR--LLVYEYVGNGNLHDMLHFAD---DSSKNLTWNARVRVALGTARALEY 527
G C G+R L+ EY+ G+L D L D K L + +++ + +EY
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 129
Query: 528 LHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567
L +HR+ + NIL+++E + D GL + P
Sbjct: 130 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 418 IGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
+G+G+ G V + G+++AVKK+ ++ + + +F + + L+H NIV
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 74
Query: 473 LAGYCAEHGQR--LLVYEYVGNGNLHDMLHFAD---DSSKNLTWNARVRVALGTARALEY 527
G C G+R L+ EY+ G+L D L D K L + +++ + +EY
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 128
Query: 528 LHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567
L +HR+ + NIL+++E + D GL + P
Sbjct: 129 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 165
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 22/187 (11%)
Query: 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKID---NAALSLQEEDNFLE 457
+++L+ F L+G G+ G+VY+ G++ A+K +D + +++E N L+
Sbjct: 16 LSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLK 75
Query: 458 AVSNMSRLRHPNIVTLAGYCAEHG------QRLLVYEYVGNGNLHDMLHFADDSSKNLTW 511
S+ H NI T G + Q LV E+ G G++ D++ ++ W
Sbjct: 76 KYSH-----HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW 130
Query: 512 NARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT--E 569
A + R L +LH+ V+HR+ K N+LL + L D G++A T
Sbjct: 131 IAYI--CREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR 185
Query: 570 RQVITGT 576
R GT
Sbjct: 186 RNTFIGT 192
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 20/194 (10%)
Query: 385 SGSLKKIKSPITATSYTVASLQTATNSFSQEFL--IGEGSLGRVYRAEFANG----KIMA 438
GS+K+I A ++ V + E L +G+GS G+V+ + +G ++ A
Sbjct: 2 EGSIKEI-----AITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYA 56
Query: 439 VKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDM 498
+K + A L +++ + + HP IV L G+ L+ +++ G+L
Sbjct: 57 MKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL--- 113
Query: 499 LHFADDSSKNLTWNARVRVALGT-ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLS 557
F S + + V+ L A AL++LH + +++R+ K NILLD+E + L+
Sbjct: 114 --FTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLT 168
Query: 558 DCGLAALTPNTERQ 571
D GL+ + + E++
Sbjct: 169 DFGLSKESIDHEKK 182
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 20/193 (10%)
Query: 386 GSLKKIKSPITATSYTVASLQTATNSFSQEFL--IGEGSLGRVYRAEFANG----KIMAV 439
GS+K+I A ++ V + E L +G+GS G+V+ + +G ++ A+
Sbjct: 4 GSIKEI-----AITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAM 58
Query: 440 KKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDML 499
K + A L +++ + + HP IV L G+ L+ +++ G+L
Sbjct: 59 KVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL---- 114
Query: 500 HFADDSSKNLTWNARVRVALGT-ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSD 558
F S + + V+ L A AL++LH + +++R+ K NILLD+E + L+D
Sbjct: 115 -FTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTD 170
Query: 559 CGLAALTPNTERQ 571
GL+ + + E++
Sbjct: 171 FGLSKESIDHEKK 183
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G+G+ G+VY+A+ ++A K+ + S +E ++++ + ++ HPNIV L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
++ E+ G + ++ + + LT + V T AL YLH+ ++
Sbjct: 104 YYENNLWILIEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLHD---NKII 157
Query: 538 HRNFKSANILLDDELNPHLSDCGLAA 563
HR+ K+ NIL + + L+D G++A
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSA 183
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 20/193 (10%)
Query: 386 GSLKKIKSPITATSYTVASLQTATNSFSQEFL--IGEGSLGRVYRAEFANG----KIMAV 439
GS+K+I A ++ V + E L +G+GS G+V+ + +G ++ A+
Sbjct: 3 GSIKEI-----AITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAM 57
Query: 440 KKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDML 499
K + A L +++ + + HP IV L G+ L+ +++ G+L
Sbjct: 58 KVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL---- 113
Query: 500 HFADDSSKNLTWNARVRVALGT-ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSD 558
F S + + V+ L A AL++LH + +++R+ K NILLD+E + L+D
Sbjct: 114 -FTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTD 169
Query: 559 CGLAALTPNTERQ 571
GL+ + + E++
Sbjct: 170 FGLSKESIDHEKK 182
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 21/160 (13%)
Query: 418 IGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
+G+G+ G V + G+++AVKK+ ++ + + +F + + L+H NIV
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 78
Query: 473 LAGYCAEHGQR--LLVYEYVGNGNLHDMLH-FAD--DSSKNLTWNARVRVALGTARALEY 527
G C G+R L+ EY+ G+L D L A+ D K L + +++ + +EY
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQI------CKGMEY 132
Query: 528 LHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567
L +HR+ + NIL+++E + D GL + P
Sbjct: 133 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 169
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G+G+ G+VY+A+ ++A K+ + S +E ++++ + ++ HPNIV L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
++ E+ G + ++ + + LT + V T AL YLH+ ++
Sbjct: 104 YYENNLWILIEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLHD---NKII 157
Query: 538 HRNFKSANILLDDELNPHLSDCGLAA 563
HR+ K+ NIL + + L+D G++A
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSA 183
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G+G+ G+VY+A+ ++A K+ + S +E ++++ + ++ HPNIV L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
++ E+ G + ++ + + LT + V T AL YLH+ ++
Sbjct: 104 YYENNLWILIEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLHD---NKII 157
Query: 538 HRNFKSANILLDDELNPHLSDCGLAA 563
HR+ K+ NIL + + L+D G++A
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSA 183
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 415 EFLIGEGSLGRVYRAEFA-NGK---IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNI 470
E +IG G G V GK +A+K + + Q D FL S M + HPN+
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRD-FLSEASIMGQFDHPNV 70
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE 530
+ L G + +++ E++ NG+L L D + +R G A ++YL +
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYLAD 127
Query: 531 VCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ + VHR + NIL++ L +SD GL+
Sbjct: 128 M---NYVHRALAARNILVNSNLVCKVSDFGLS 156
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 26/171 (15%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G+ G V+R E A G A K + S +E + + MS LRHP +V L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE--TVRKEIQTMSVLRHPTLVNLHDA 116
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLP-- 534
+ + +++YE++ G L + + AD+ +K + A+EY+ +VC
Sbjct: 117 FEDDNEMVMIYEFMSGGELFEKV--ADEHNK-----------MSEDEAVEYMRQVCKGLC 163
Query: 535 -----SVVHRNFKSANILLDDELNPHLS--DCGLAA-LTPNTERQVITGTS 577
+ VH + K NI+ + + L D GL A L P +V TGT+
Sbjct: 164 HMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTA 214
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 11/154 (7%)
Query: 418 IGEGSLGRVY--RAEFANGKIMAVKKIDNA-ALSLQEEDNFLEAVSNMSRLRHPNIVTLA 474
+G GS GRV+ R+ NG+ A+K + + L++ ++ + +S + HP I+ +
Sbjct: 14 LGTGSFGRVHLIRSR-HNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMW 72
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLP 534
G + Q ++ +Y+ G L +L S+ A ALEYLH
Sbjct: 73 GTFQDAQQIFMIMDYIEGGELFSLLR----KSQRFPNPVAKFYAAEVCLALEYLHS---K 125
Query: 535 SVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568
+++R+ K NILLD + ++D G A P+
Sbjct: 126 DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV 159
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 26/171 (15%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G+ G V+R E A G A K + S +E + + MS LRHP +V L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE--TVRKEIQTMSVLRHPTLVNLHDA 222
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLP-- 534
+ + +++YE++ G L + + AD+ +K + A+EY+ +VC
Sbjct: 223 FEDDNEMVMIYEFMSGGELFEKV--ADEHNK-----------MSEDEAVEYMRQVCKGLC 269
Query: 535 -----SVVHRNFKSANILLDDELNPHLS--DCGLAA-LTPNTERQVITGTS 577
+ VH + K NI+ + + L D GL A L P +V TGT+
Sbjct: 270 HMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTA 320
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IGEGS G V A E GK +AVKK+D Q + V M H N+V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMD--LRKQQRRELLFNEVVIMRDYHHDNVVDMYSS 110
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
+ +V E++ G L D++ + + + V L RAL YLH V
Sbjct: 111 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----TVCLSVLRALSYLHN---QGV 162
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAALTPNT--ERQVITGT 576
+HR+ KS +ILL + LSD G A +R+ + GT
Sbjct: 163 IHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGT 204
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 30/171 (17%)
Query: 418 IGEGSLGRVYRAEFANGK------IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471
+GEG G+V +A + K +AVK + A S E + L + + ++ HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHPHVI 89
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLH--------------------FADDSSKNLTW 511
L G C++ G LL+ EY G+L L + LT
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 512 NARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ A ++ ++YL E+ S+VHR+ + NIL+ + +SD GL+
Sbjct: 150 GDLISFAWQISQGMQYLAEM---SLVHRDLAARNILVAEGRKMKISDFGLS 197
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 9/165 (5%)
Query: 415 EFLIGEGSLGRVY--RAEFANGKIMAVK-KIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471
E +IG G G V R + + +AV K + ++ +FL S M + HPN+V
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV 531
L G ++V E++ NG L L D + +R G A + YL ++
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR---GIAAGMRYLADM 164
Query: 532 CLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
VHR+ + NIL++ L +SD GL+ + + V T T
Sbjct: 165 ---GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTT 206
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 8/146 (5%)
Query: 418 IGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IG G+ G V+ A+ ++AVK L + FL+ + + HPNIV L G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSC-RETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
C + +V E V G D L F L +++ A +EYL C
Sbjct: 181 CTQKQPIYIVMELVQGG---DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 537 VHRNFKSANILLDDELNPHLSDCGLA 562
+HR+ + N L+ ++ +SD G++
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMS 260
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 13/156 (8%)
Query: 418 IGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAG 475
+G G+ G+V + G +AVK ++ + SL + N+ RHP+I+ L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKN--LTWNARVRVALGTARALEYLHEVCL 533
+ +V EYV G L D + KN L R+ ++Y H
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYI------CKNGRLDEKESRRLFQQILSGVDYCHR--- 134
Query: 534 PSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
VVHR+ K N+LLD +N ++D GL+ + + E
Sbjct: 135 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 8/146 (5%)
Query: 418 IGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IG G+ G V+ A+ ++AVK L + FL+ + + HPNIV L G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSC-RETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
C + +V E V G D L F L +++ A +EYL C
Sbjct: 181 CTQKQPIYIVMELVQGG---DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 537 VHRNFKSANILLDDELNPHLSDCGLA 562
+HR+ + N L+ ++ +SD G++
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMS 260
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 30/176 (17%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNM 462
SL+ A++ F + ++G+G+ G+V +A A + + A+KKI + L L V +
Sbjct: 1 SLRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS---TILSEVMLL 56
Query: 463 SRLRHPNIVTLAGYCAEHGQRLLV---------------YEYVGNGNLHDMLHFAD-DSS 506
+ L H +V Y A +R V EY NG L+D++H + +
Sbjct: 57 ASLNHQYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQ 114
Query: 507 KNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
++ W R+ AL Y+H ++HR+ K NI +D+ N + D GLA
Sbjct: 115 RDEYW----RLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLA 163
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 18/163 (11%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQ--EEDNFLEAVSNMSRLRHPNIVTLAG 475
IG+GS G+V + + K M K N ++ E N + + M L HP +V L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 476 YCAEHGQRLLVYEYVGNGNLHDML----HFADDSSKNLTWNARVRVALGTARALEYLHEV 531
+ +V + + G+L L HF +++ K AL+YL
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFI--------CELVMALDYLQN- 133
Query: 532 CLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVIT 574
++HR+ K NILLD+ + H++D +AA+ P E Q+ T
Sbjct: 134 --QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR-ETQITT 173
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 415 EFLIGEGSLGRVYRAEFA-NGK---IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNI 470
E +IG G G V GK +A+K + Q D FL S M + HPNI
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNI 85
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE 530
+ L G + ++V EY+ NG+L L D + +R G + ++YL +
Sbjct: 86 IHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLR---GISAGMKYLSD 142
Query: 531 VCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ VHR+ + NIL++ L +SD GL+
Sbjct: 143 M---GYVHRDLAARNILINSNLVCKVSDFGLS 171
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEED----NFLEAVSNMSRLR----HPN 469
+GEG+ G+V AE ++ A+ + + D + + +S M ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDMLH--------FADDSSKN----LTWNARVRV 517
I+ L G C + G ++ EY GNL + L F+ + S N L+ V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 518 ALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
A AR +EYL +HR+ + N+L+ ++ ++D GLA
Sbjct: 156 AYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 9/147 (6%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G+G+ G+VY+A+ G + A K I+ S +E ++++ + ++ HP IV L G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLGA 76
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
G+ ++ E+ G + ++ D + LT V AL +LH +
Sbjct: 77 YYHDGKLWIMIEFCPGGAVDAIMLELD---RGLTEPQIQVVCRQMLEALNFLHS---KRI 130
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAA 563
+HR+ K+ N+L+ E + L+D G++A
Sbjct: 131 IHRDLKAGNVLMTLEGDIRLADFGVSA 157
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 23/165 (13%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEED----NFLEAVSNMSRLR----HPN 469
+GEG+ G+V AE ++ A+ + + D + + +S M ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNAR------------VRV 517
I+ L G C + G ++ EY GNL + L + ++N V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 518 ALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
A AR +EYL +HR+ + N+L+ ++ ++D GLA
Sbjct: 156 AYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 82/182 (45%), Gaps = 15/182 (8%)
Query: 402 VASLQTATNSF---SQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLE 457
V + Q A NSF S+ ++G G G+V++ E A G +A K I + +EE
Sbjct: 78 VTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEE--VKN 135
Query: 458 AVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRV 517
+S M++L H N++ L +LV EYV G L D + D S NLT +
Sbjct: 136 EISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRII---DESYNLTELDTILF 192
Query: 518 ALGTARALEYLHEVCLPSVVHRNFKSANILL--DDELNPHLSDCGLA-ALTPNTERQVIT 574
+ ++H++ ++H + K NIL D + D GLA P + +V
Sbjct: 193 MKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF 249
Query: 575 GT 576
GT
Sbjct: 250 GT 251
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 9/147 (6%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G+G+ G+VY+A+ G + A K I+ S +E ++++ + ++ HP IV L G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLGA 84
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
G+ ++ E+ G + ++ D + LT V AL +LH +
Sbjct: 85 YYHDGKLWIMIEFCPGGAVDAIMLELD---RGLTEPQIQVVCRQMLEALNFLHS---KRI 138
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAA 563
+HR+ K+ N+L+ E + L+D G++A
Sbjct: 139 IHRDLKAGNVLMTLEGDIRLADFGVSA 165
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 25/166 (15%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEED----NFLEAVSNMSRLR----HPN 469
+GEG+ G+V AE K+ A+ + ++D + + VS M ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDML--------HFADD----SSKNLTWNARVRV 517
I+ L G C + G ++ EY GNL + L ++ D + +T+ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 518 ALGTARALEYL-HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
AR +EYL + C +HR+ + N+L+ + ++D GLA
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMRIADFGLA 204
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 8/156 (5%)
Query: 417 LIGE-GSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG 475
+IGE G G+VY+A+ ++A K+ + S +E ++++ + ++ HPNIV L
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
++ E+ G + ++ + + LT + V T AL YLH+
Sbjct: 75 AFYYENNLWILIEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLHD---NK 128
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
++HR+ K+ NIL + + L+D G++A T Q
Sbjct: 129 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQ 164
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 33/170 (19%)
Query: 418 IGEGSLGRVYRAEFA--------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR--- 466
+GEG+ G+V AE +AVK + + A E++ + VS M ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT----EEDLSDLVSEMEMMKMIG 98
Query: 467 -HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDML--------HFADD----SSKNLTWNA 513
H NI+ L G C + G ++ EY GNL + L ++ D + +T+
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 514 RVRVALGTARALEYL-HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
V AR +EYL + C +HR+ + N+L+ + ++D GLA
Sbjct: 159 LVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 25/166 (15%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEED----NFLEAVSNMSRLR----HPN 469
+GEG+ G+V AE K+ A+ + ++D + + VS M ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDML--------HFADD----SSKNLTWNARVRV 517
I+ L G C + G ++ EY GNL + L ++ D + +T+ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 518 ALGTARALEYL-HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
AR +EYL + C +HR+ + N+L+ + ++D GLA
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 25/166 (15%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEED----NFLEAVSNMSRLR----HPN 469
+GEG+ G+V AE K+ A+ + ++D + + VS M ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDML--------HFADD----SSKNLTWNARVRV 517
I+ L G C + G ++ EY GNL + L ++ D + +T+ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 518 ALGTARALEYL-HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
AR +EYL + C +HR+ + N+L+ + ++D GLA
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 30/171 (17%)
Query: 418 IGEGSLGRVYRAEFANGK------IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471
+GEG G+V +A + K +AVK + A S E + L + + ++ HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHPHVI 89
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLH--------------------FADDSSKNLTW 511
L G C++ G LL+ EY G+L L + LT
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 512 NARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ A ++ ++YL E+ L VHR+ + NIL+ + +SD GL+
Sbjct: 150 GDLISFAWQISQGMQYLAEMKL---VHRDLAARNILVAEGRKMKISDFGLS 197
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 25/166 (15%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEED----NFLEAVSNMSRLR----HPN 469
+GEG G+V AE K+ A+ + ++D + + VS M ++ H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDML--------HFADD----SSKNLTWNARVRV 517
I+ L G C + G ++ EY GNL + L ++ D + +T+ V
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 518 ALGTARALEYL-HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
AR +EYL + C +HR+ + N+L+ + ++D GLA
Sbjct: 209 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLA 250
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 30/171 (17%)
Query: 418 IGEGSLGRVYRAEFANGK------IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471
+GEG G+V +A + K +AVK + A S E + L + + ++ HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHPHVI 89
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLH--------------------FADDSSKNLTW 511
L G C++ G LL+ EY G+L L + LT
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 512 NARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ A ++ ++YL E+ L VHR+ + NIL+ + +SD GL+
Sbjct: 150 GDLISFAWQISQGMQYLAEMKL---VHRDLAARNILVAEGRKMKISDFGLS 197
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEED----NFLEAVSNMSRLR----HPN 469
+GEG+ G+V AE ++ A+ + + D + + +S M ++ H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHF------------ADDSSKNLTWNARVRV 517
I+ L G C + G ++ EY GNL + L + + + L+ V
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 518 ALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
A AR +EYL +HR+ + N+L+ ++ ++D GLA
Sbjct: 197 AYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLA 238
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 19/181 (10%)
Query: 402 VASLQTATNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDN---FLE 457
+ S+ +++ IG+G+ G VY A + A G+ +A+++ ++LQ++ +
Sbjct: 13 IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQ-----MNLQQQPKKELIIN 67
Query: 458 AVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRV 517
+ M ++PNIV + +V EY+ G+L D++ + + V
Sbjct: 68 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAV 122
Query: 518 ALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA-LTP-NTERQVITG 575
+ALE+LH V+HRN KS NILL + + L+D G A +TP ++R + G
Sbjct: 123 CRECLQALEFLHS---NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG 179
Query: 576 T 576
T
Sbjct: 180 T 180
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 85/175 (48%), Gaps = 20/175 (11%)
Query: 418 IGEGSLGRVYRAEFAN-----GKIM-AVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471
+GEG+ G+V+ AE N KI+ AVK + +A+ + ++ +F ++ L+H +IV
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARK--DFHREAELLTNLQHEHIV 78
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDML--HFAD-------DSSKNLTWNARVRVALGTA 522
G C E ++V+EY+ +G+L+ L H D + LT + + +A A
Sbjct: 79 KFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGTS 577
+ YL VHR+ + N L+ + L + D G++ +T+ + G +
Sbjct: 139 AGMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHT 190
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
Query: 421 GSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFL--EAVSNMSRLRHPNIVTLAGYCA 478
G G V++A+ N +AVK LQ++ ++ + + ++H N++
Sbjct: 26 GRFGCVWKAQLMN-DFVAVK-----IFPLQDKQSWQSEREIFSTPGMKHENLLQFIA-AE 78
Query: 479 EHGQRLLVYEYVGNGNLHDMLHFADDSSKNL-TWNARVRVALGTARALEYLHE---VCL- 533
+ G L V ++ HD D N+ TWN VA +R L YLHE C
Sbjct: 79 KRGSNLEVELWLITA-FHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 534 ----PSVVHRNFKSANILLDDELNPHLSDCGLA 562
PS+ HR+FKS N+LL +L L+D GLA
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA 170
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 25/166 (15%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEED----NFLEAVSNMSRLR----HPN 469
+GEG G+V AE K+ A+ + ++D + + VS M ++ H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDML--------HFADD----SSKNLTWNARVRV 517
I+ L G C + G ++ EY GNL + L ++ D + +T+ V
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 518 ALGTARALEYL-HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
AR +EYL + C +HR+ + N+L+ + ++D GLA
Sbjct: 150 TYQLARGMEYLASQKC----IHRDLTARNVLVTENNVMKIADFGLA 191
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 25/166 (15%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEED----NFLEAVSNMSRLR----HPN 469
+GEG G+V AE K+ A+ + ++D + + VS M ++ H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDML--------HFADD----SSKNLTWNARVRV 517
I+ L G C + G ++ EY GNL + L ++ D + +T+ V
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 518 ALGTARALEYL-HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
AR +EYL + C +HR+ + N+L+ + ++D GLA
Sbjct: 155 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLA 196
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 25/166 (15%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEED----NFLEAVSNMSRLR----HPN 469
+GEG+ G+V AE K+ A+ + ++D + + VS M ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDML--------HFADD----SSKNLTWNARVRV 517
I+ L G C + G ++ EY GNL + L ++ D + +T+ V
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 518 ALGTARALEYL-HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
AR +EYL + C +HR+ + N+L+ + ++D GLA
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 25/166 (15%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEED----NFLEAVSNMSRLR----HPN 469
+GEG G+V AE K+ A+ + ++D + + VS M ++ H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDML--------HFADD----SSKNLTWNARVRV 517
I+ L G C + G ++ EY GNL + L ++ D + +T+ V
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 518 ALGTARALEYL-HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
AR +EYL + C +HR+ + N+L+ + ++D GLA
Sbjct: 152 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLA 193
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 30/176 (17%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNM 462
SL+ A++ F + ++G+G+ G+V +A A + + A+KKI + L L V +
Sbjct: 1 SLRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS---TILSEVXLL 56
Query: 463 SRLRHPNIVTLAGYCAEHGQRLLV---------------YEYVGNGNLHDMLHFAD-DSS 506
+ L H +V Y A +R V EY N L+D++H + +
Sbjct: 57 ASLNHQYVVRY--YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQ 114
Query: 507 KNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
++ W R+ AL Y+H ++HRN K NI +D+ N + D GLA
Sbjct: 115 RDEYW----RLFRQILEALSYIHS---QGIIHRNLKPXNIFIDESRNVKIGDFGLA 163
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 8/147 (5%)
Query: 417 LIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG 475
L+GEGS G V + + G+I+A+KK + + + + + +LRH N+V L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
C + + LV+E+V + L D+ F + L + + + + H +
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPN----GLDYQVVQKYLFQIINGIGFCHS---HN 144
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLA 562
++HR+ K NIL+ L D G A
Sbjct: 145 IIHRDIKPENILVSQSGVVKLCDFGFA 171
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR 466
+ +F + IGEG+ G VY+A G+++A+KKI + + +S + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 467 HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARAL 525
HPNIV L + LV+E+V D+ F D S+ ++ L + L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ H V+HR+ K N+L++ E L+D GLA
Sbjct: 120 AFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEED----NFLEAVSNMSRLR----HPN 469
+GEG+ G+V AE ++ A+ + + D + + +S M ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHF------------ADDSSKNLTWNARVRV 517
I+ L G C + G ++ EY GNL + L + + + L+ V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 518 ALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
A AR +EYL +HR+ + N+L+ ++ ++D GLA
Sbjct: 156 AYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEED----NFLEAVSNMSRLR----HPN 469
+GEG+ G+V AE ++ A+ + + D + + +S M ++ H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHF------------ADDSSKNLTWNARVRV 517
I+ L G C + G ++ EY GNL + L + + + L+ V
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 518 ALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
A AR +EYL +HR+ + N+L+ ++ ++D GLA
Sbjct: 149 AYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLA 190
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEED----NFLEAVSNMSRLR----HPN 469
+GEG+ G+V AE ++ A+ + + D + + +S M ++ H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHF------------ADDSSKNLTWNARVRV 517
I+ L G C + G ++ EY GNL + L + + + L+ V
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 518 ALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
A AR +EYL +HR+ + N+L+ ++ ++D GLA
Sbjct: 148 AYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLA 189
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEA-VSNMSRLRHPNIVTL--A 474
+G+G G V+R + G+ +AVK S E+ F E + N LRH NI+ +
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFS----SRDEKSWFRETELYNTVMLRHENILGFIAS 99
Query: 475 GYCAEHG--QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
+ H Q L+ Y G+L+D L L + +R+ L A L +LH
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 533 L-----PSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITG 575
P++ HR+ KS NIL+ ++D GLA + + Q+ G
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG 202
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEED----NFLEAVSNMSRLR----HPN 469
+GEG+ G+V AE ++ A+ + + D + + +S M ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHF------------ADDSSKNLTWNARVRV 517
I+ L G C + G ++ EY GNL + L + + + L+ V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 518 ALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
A AR +EYL +HR+ + N+L+ ++ ++D GLA
Sbjct: 156 AYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEED----NFLEAVSNMSRLR----HPN 469
+GEG+ G+V AE ++ A+ + + D + + +S M ++ H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHF------------ADDSSKNLTWNARVRV 517
I+ L G C + G ++ EY GNL + L + + + L+ V
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 518 ALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
A AR +EYL +HR+ + N+L+ ++ ++D GLA
Sbjct: 141 AYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLA 182
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEED----NFLEAVSNMSRLR----HPN 469
+GEG+ G+V AE ++ A+ + + D + + +S M ++ H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHF------------ADDSSKNLTWNARVRV 517
I+ L G C + G ++ EY GNL + L + + + L+ V
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 518 ALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
A AR +EYL +HR+ + N+L+ ++ ++D GLA
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 186
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 401 TVASLQTATNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDN---FL 456
++ S+ +++ IG+G+ G VY A + A G+ +A+++ ++LQ++ +
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQ-----MNLQQQPKKELII 65
Query: 457 EAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVR 516
+ M ++PNIV + +V EY+ G+L D++ + +
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQIAA 120
Query: 517 VALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA-LTP-NTERQVIT 574
V +ALE+LH V+HR+ KS NILL + + L+D G A +TP ++R +
Sbjct: 121 VCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV 177
Query: 575 GT 576
GT
Sbjct: 178 GT 179
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 25/166 (15%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEED----NFLEAVSNMSRLR----HPN 469
+GEG+ G+V AE K+ A+ + ++D + + VS M ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRV 517
I+ L G C + G ++ EY GNL + L + +T+ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 518 ALGTARALEYL-HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
AR +EYL + C +HR+ + N+L+ + ++D GLA
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 19/176 (10%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALS----LQEEDNFLEAVSNMSRL-RHPNIV 471
+G G+ G+V A F GK AV K+ L E++ + + MS L +H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH-- 529
L G C G L++ EY G D+L+F S+ L + +A TA + LH
Sbjct: 114 NLLGACTHGGPVLVITEYCCYG---DLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFS 170
Query: 530 --------EVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGTS 577
+ + +HR+ + N+LL + + D GLA N ++ G +
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNN 140
S +VS+ +S LSGT+ L L LR L N + IP +L L +L L N+
Sbjct: 415 SELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFND 474
Query: 141 FSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGD 192
+G +P +++ +L+++++S N LT I G L LA L LS N+FSG+
Sbjct: 475 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 526
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 43 DVQALQVLYTSLNSPSVLTNWKGNEGDPCGESWKGVACEGSAVVSIDISG----LGLSGT 98
++ L L ++L +W N+ +PC ++ GV C V SID+S +G S
Sbjct: 10 EIHQLISFKDVLPDKNLLPDWSSNK-NPC--TFDGVTCRDDKVTSIDLSSKPLNVGFSAV 66
Query: 99 MGYLLSDLLSLRKFDLSGNSIHDTIP-YQLPPNLTSLNLASNNFSGNLP--YSIASMVSL 155
LLS F LS + I+ ++ ++ +LTSL+L+ N+ SG + S+ S L
Sbjct: 67 SSSLLSLTGLESLF-LSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGL 125
Query: 156 SYLNVSRNSLTQSIGDIFGNLA--GLATLDLSFNNFSGDXX---XXXXXXXXXXXXXXXX 210
+LNVS N+L G + G L L LDLS N+ SG
Sbjct: 126 KFLNVSSNTLDFP-GKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISG 184
Query: 211 XQVTGSLNVFSGLPLTTLNVANNHFSGWIP 240
+++G ++V + L L+V++N+FS IP
Sbjct: 185 NKISGDVDVSRCVNLEFLDVSSNNFSTGIP 214
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 23/116 (19%)
Query: 134 LNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDX 193
L+++ N SG +P I SM L LN+ N ++ SI D G+L GL LDLS N G
Sbjct: 634 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDG-- 691
Query: 194 XXXXXXXXXXXXXXXXXXQVTGSLNVFSGLPLTTLNVANNHFSGWIPRELISIRTF 249
Q +L + LT ++++NN+ SG IP E+ TF
Sbjct: 692 ---------------RIPQAMSALTM-----LTEIDLSNNNLSGPIP-EMGQFETF 726
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 26/136 (19%)
Query: 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFS 142
SA+ +DISG LSG +S L+ ++S N IP +L L+LA N F+
Sbjct: 220 SALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFT 279
Query: 143 GNLPYSIASMV-SLSYLNVSRNSLTQSIGDIFG-------------------------NL 176
G +P ++ +L+ L++S N ++ FG +
Sbjct: 280 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 339
Query: 177 AGLATLDLSFNNFSGD 192
GL LDLSFN FSG+
Sbjct: 340 RGLKVLDLSFNEFSGE 355
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 9/159 (5%)
Query: 88 IDISGLGLSG--TMGYLLSDLL-SLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGN 144
+D+S +SG +G++LSD L+ +SGN I + NL L+++SNNFS
Sbjct: 153 LDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTG 212
Query: 145 LPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDXXXXXXXXXXXX 204
+P+ + +L +L++S N L+ L L++S N F G
Sbjct: 213 IPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVG--PIPPLPLKSLQ 269
Query: 205 XXXXXXXQVTGSLNVF-SGL--PLTTLNVANNHFSGWIP 240
+ TG + F SG LT L+++ NHF G +P
Sbjct: 270 YLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 308
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 108 SLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSL 165
S+ D+S N + IP ++ P L LNL N+ SG++P + + L+ L++S N L
Sbjct: 630 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL 689
Query: 166 TQSIGDIFGNLAGLATLDLSFNNFSG 191
I L L +DLS NN SG
Sbjct: 690 DGRIPQAMSALTMLTEIDLSNNNLSG 715
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 31/195 (15%)
Query: 88 IDISGLGLSGTMGYLLSDL-LSLRKFDLSGNSIHDTIPYQLPPN----LTSLNLASNNFS 142
+D+S SG + L++L SL DLS N+ I L N L L L +N F+
Sbjct: 345 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 404
Query: 143 GNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAG------------------------ 178
G +P ++++ L L++S N L+ +I G+L+
Sbjct: 405 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKT 464
Query: 179 LATLDLSFNNFSGDXXXXXXXXXXXXXXXXXXXQVTGSLNVFSGL--PLTTLNVANNHFS 236
L TL L FN+ +G+ ++TG + + G L L ++NN FS
Sbjct: 465 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 524
Query: 237 GWIPRELISIRTFIY 251
G IP EL R+ I+
Sbjct: 525 GNIPAELGDCRSLIW 539
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 95 LSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASM 152
L+G + LS+ +L LS N + IP + NL L L++N+FSGN+P +
Sbjct: 475 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDC 534
Query: 153 VSLSYLNVSRNSLTQSI 169
SL +L+++ N +I
Sbjct: 535 RSLIWLDLNTNLFNGTI 551
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPP--NLTSLNLASNNF 141
+++ +D+S LSG + + + L +L N I +IP ++ L L+L+SN
Sbjct: 630 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL 689
Query: 142 SGNLPYSIASMVSLSYLNVSRNSLTQSIGDI 172
G +P +++++ L+ +++S N+L+ I ++
Sbjct: 690 DGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 720
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNN 140
S +VS+ +S LSGT+ L L LR L N + IP +L L +L L N+
Sbjct: 418 SELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFND 477
Query: 141 FSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGD 192
+G +P +++ +L+++++S N LT I G L LA L LS N+FSG+
Sbjct: 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 529
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 43 DVQALQVLYTSLNSPSVLTNWKGNEGDPCGESWKGVACEGSAVVSIDISG----LGLSGT 98
++ L L ++L +W N+ +PC ++ GV C V SID+S +G S
Sbjct: 13 EIHQLISFKDVLPDKNLLPDWSSNK-NPC--TFDGVTCRDDKVTSIDLSSKPLNVGFSAV 69
Query: 99 MGYLLSDLLSLRKFDLSGNSIHDTIP-YQLPPNLTSLNLASNNFSGNLP--YSIASMVSL 155
LLS F LS + I+ ++ ++ +LTSL+L+ N+ SG + S+ S L
Sbjct: 70 SSSLLSLTGLESLF-LSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGL 128
Query: 156 SYLNVSRNSLTQSIGDIFGNLA--GLATLDLSFNNFSGDXX---XXXXXXXXXXXXXXXX 210
+LNVS N+L G + G L L LDLS N+ SG
Sbjct: 129 KFLNVSSNTLDFP-GKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISG 187
Query: 211 XQVTGSLNVFSGLPLTTLNVANNHFSGWIP 240
+++G ++V + L L+V++N+FS IP
Sbjct: 188 NKISGDVDVSRCVNLEFLDVSSNNFSTGIP 217
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 23/116 (19%)
Query: 134 LNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDX 193
L+++ N SG +P I SM L LN+ N ++ SI D G+L GL LDLS N G
Sbjct: 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDG-- 694
Query: 194 XXXXXXXXXXXXXXXXXXQVTGSLNVFSGLPLTTLNVANNHFSGWIPRELISIRTF 249
Q +L + LT ++++NN+ SG IP E+ TF
Sbjct: 695 ---------------RIPQAMSALTM-----LTEIDLSNNNLSGPIP-EMGQFETF 729
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 26/136 (19%)
Query: 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFS 142
SA+ +DISG LSG +S L+ ++S N IP +L L+LA N F+
Sbjct: 223 SALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFT 282
Query: 143 GNLPYSIASMV-SLSYLNVSRNSLTQSIGDIFG-------------------------NL 176
G +P ++ +L+ L++S N ++ FG +
Sbjct: 283 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 342
Query: 177 AGLATLDLSFNNFSGD 192
GL LDLSFN FSG+
Sbjct: 343 RGLKVLDLSFNEFSGE 358
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 9/159 (5%)
Query: 88 IDISGLGLSG--TMGYLLSDLL-SLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGN 144
+D+S +SG +G++LSD L+ +SGN I + NL L+++SNNFS
Sbjct: 156 LDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTG 215
Query: 145 LPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDXXXXXXXXXXXX 204
+P+ + +L +L++S N L+ L L++S N F G
Sbjct: 216 IPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVG--PIPPLPLKSLQ 272
Query: 205 XXXXXXXQVTGSLNVF-SGL--PLTTLNVANNHFSGWIP 240
+ TG + F SG LT L+++ NHF G +P
Sbjct: 273 YLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 311
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 108 SLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSL 165
S+ D+S N + IP ++ P L LNL N+ SG++P + + L+ L++S N L
Sbjct: 633 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL 692
Query: 166 TQSIGDIFGNLAGLATLDLSFNNFSG 191
I L L +DLS NN SG
Sbjct: 693 DGRIPQAMSALTMLTEIDLSNNNLSG 718
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 31/195 (15%)
Query: 88 IDISGLGLSGTMGYLLSDL-LSLRKFDLSGNSIHDTIPYQLPPN----LTSLNLASNNFS 142
+D+S SG + L++L SL DLS N+ I L N L L L +N F+
Sbjct: 348 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 407
Query: 143 GNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAG------------------------ 178
G +P ++++ L L++S N L+ +I G+L+
Sbjct: 408 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKT 467
Query: 179 LATLDLSFNNFSGDXXXXXXXXXXXXXXXXXXXQVTGSLNVFSGL--PLTTLNVANNHFS 236
L TL L FN+ +G+ ++TG + + G L L ++NN FS
Sbjct: 468 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 527
Query: 237 GWIPRELISIRTFIY 251
G IP EL R+ I+
Sbjct: 528 GNIPAELGDCRSLIW 542
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 95 LSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASM 152
L+G + LS+ +L LS N + IP + NL L L++N+FSGN+P +
Sbjct: 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDC 537
Query: 153 VSLSYLNVSRNSLTQSI 169
SL +L+++ N +I
Sbjct: 538 RSLIWLDLNTNLFNGTI 554
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPP--NLTSLNLASNNF 141
+++ +D+S LSG + + + L +L N I +IP ++ L L+L+SN
Sbjct: 633 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL 692
Query: 142 SGNLPYSIASMVSLSYLNVSRNSLTQSIGDI 172
G +P +++++ L+ +++S N+L+ I ++
Sbjct: 693 DGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 723
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 415 EFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHP 468
++ +GEG+ G+V+ AE N ++AVK + A+ S ++ +F ++ L+H
Sbjct: 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ--DFQREAELLTMLQHQ 103
Query: 469 NIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVA-LGTARALEY 527
+IV G C E L+V+EY+ +G+L+ L +K L V LG + L
Sbjct: 104 HIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 528 LHEVCLPSV-------VHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGTS 577
+V V VHR+ + N L+ L + D G++ +T+ + G +
Sbjct: 164 ASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 220
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 418 IGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
+G+G+ G V + G+++AVKK+ ++ + + +F + + L+H NIV
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 78
Query: 473 LAGYCAEHGQR--LLVYEYVGNGNLHDMLHFAD---DSSKNLTWNARVRVALGTARALEY 527
G C G+R L+ E++ G+L + L D K L + +++ + +EY
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQI------CKGMEY 132
Query: 528 LHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567
L +HR+ + NIL+++E + D GL + P
Sbjct: 133 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 169
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 395 ITATSYTVASLQTATNS-FSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSL 449
I+ T + A + A S F ++G+GS G+V+ +G + A+K + A L +
Sbjct: 12 ISITHHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKV 71
Query: 450 QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNL 509
++ ++ + HP +V L G+ L+ +++ G+L F S + +
Sbjct: 72 RDRVRTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDL-----FTRLSKEVM 126
Query: 510 TWNARVRVALGT-ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568
V+ L A L++LH + +++R+ K NILLD+E + L+D GL+ +
Sbjct: 127 FTEEDVKFYLAELALGLDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDH 183
Query: 569 ERQ 571
E++
Sbjct: 184 EKK 186
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 401 TVASLQTATNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDN---FL 456
++ S+ +++ IG+G+ G VY A + A G+ +A+++ ++LQ++ +
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQ-----MNLQQQPKKELII 65
Query: 457 EAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVR 516
+ M ++PNIV + +V EY+ G+L D++ + +
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQIAA 120
Query: 517 VALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA-LTP-NTERQVIT 574
V +ALE+LH V+HR+ KS NILL + + L+D G A +TP ++R +
Sbjct: 121 VCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV 177
Query: 575 GT 576
GT
Sbjct: 178 GT 179
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 9/147 (6%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IGEG+ G VY+A G+++A+KKI + + +S + L HPNIV L
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARALEYLHEVCLPS 535
+ LV+E++ D+ F D S+ ++ L + L + H
Sbjct: 78 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---R 130
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLA 562
V+HR+ K N+L++ E L+D GLA
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLA 157
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 417 LIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG 475
++G G+ V AE K++A+K I AL +E + ++ + +++HPNIV L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE-GKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
G L+ + V G L D + T R+ A++YLH++
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIV----EKGFYTERDASRLIFQVLDAVKYLHDL---G 136
Query: 536 VVHRNFKSANIL---LDDELNPHLSDCGLAAL 564
+VHR+ K N+L LD++ +SD GL+ +
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLA 474
++GEGS V A E A + A+K ++ + + + ++ + MSRL HP V L
Sbjct: 44 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 103
Query: 475 GYCAEHGQRLLV-YEYVGNGNLHDMLHFADDSSKNLT--WNARVRVALGTARALEYLHEV 531
+C + ++L Y NG L + + T + A + ALEYLH
Sbjct: 104 -FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEYLHG- 155
Query: 532 CLPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNTER 570
++HR+ K NILL+++++ ++D G A L+P +++
Sbjct: 156 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 193
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 401 TVASLQTATNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDN---FL 456
++ S+ +++ IG+G+ G VY A + A G+ +A+++ ++LQ++ +
Sbjct: 12 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQ-----MNLQQQPKKELII 66
Query: 457 EAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVR 516
+ M ++PNIV + +V EY+ G+L D++ + +
Sbjct: 67 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQIAA 121
Query: 517 VALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA-LTP-NTERQVIT 574
V +ALE+LH V+HR+ KS NILL + + L+D G A +TP ++R +
Sbjct: 122 VCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV 178
Query: 575 GT 576
GT
Sbjct: 179 GT 180
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR 466
+ +F + IGEG+ G VY+A G+++A+KKI + + +S + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 467 HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARAL 525
HPNIV L + LV+E++ D+ F D S+ ++ L + L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ H V+HR+ K N+L++ E L+D GLA
Sbjct: 120 AFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR 466
+ +F + IGEG+ G VY+A G+++A+KKI + + +S + L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 467 HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARAL 525
HPNIV L + LV+E++ D+ F D S+ ++ L + L
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGL 120
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ H V+HR+ K N+L++ E L+D GLA
Sbjct: 121 AFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLA 154
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 78/184 (42%), Gaps = 24/184 (13%)
Query: 408 ATNSFSQEF----LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNM 462
A F Q++ +IG G V R A G AVK ++ A L E LE V
Sbjct: 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQ--LEEVREA 145
Query: 463 SR-----LR----HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNA 513
+R LR HP+I+TL LV++ + G L D L L+
Sbjct: 146 TRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL----TEKVALSEKE 201
Query: 514 RVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA-LTPNTERQV 572
+ A+ +LH ++VHR+ K NILLDD + LSD G + L P + +
Sbjct: 202 TRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE 258
Query: 573 ITGT 576
+ GT
Sbjct: 259 LCGT 262
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 9/147 (6%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IGEG+ G VY+A G+++A+KKI + + +S + L HPNIV L
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARALEYLHEVCLPS 535
+ LV+E++ D+ F D S+ ++ L + L + H
Sbjct: 78 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---R 130
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLA 562
V+HR+ K N+L++ E L+D GLA
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLA 157
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEA-VSNMSRLRHPNIVTL--A 474
+G+G G V+R + G+ +AVK S E+ F E + N LRH NI+ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFS----SRDEKSWFRETELYNTVMLRHENILGFIAS 70
Query: 475 GYCAEHG--QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
+ H Q L+ Y G+L+D L L + +R+ L A L +LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 533 L-----PSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITG 575
P++ HR+ KS NIL+ ++D GLA + + Q+ G
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG 173
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR 466
+ +F + IGEG+ G VY+A G+++A+KKI + + +S + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 467 HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARAL 525
HPNIV L + LV+E++ D+ F D S+ ++ L + L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ H V+HR+ K N+L++ E L+D GLA
Sbjct: 117 AFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR 466
+ +F + IGEG+ G VY+A G+++A+KKI + + +S + L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 467 HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARAL 525
HPNIV L + LV+E++ D+ F D S+ ++ L + L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ H V+HR+ K N+L++ E L+D GLA
Sbjct: 118 AFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 417 LIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG 475
++G G+ V AE K++A+K I AL +E + ++ + +++HPNIV L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALE-GKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
G L+ + V G L D + T R+ A++YLH++
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIV----EKGFYTERDASRLIFQVLDAVKYLHDL---G 136
Query: 536 VVHRNFKSANIL---LDDELNPHLSDCGLAAL 564
+VHR+ K N+L LD++ +SD GL+ +
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR 466
+ +F + IGEG+ G VY+A G+++A+KKI + + +S + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 467 HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARAL 525
HPNIV L + LV+E++ D+ F D S+ ++ L + L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ H V+HR+ K N+L++ E L+D GLA
Sbjct: 120 AFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 9/147 (6%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IGEG+ G VY+A G+++A+KKI + + +S + L HPNIV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARALEYLHEVCLPS 535
+ LV+E++ D+ F D S+ ++ L + L + H
Sbjct: 71 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS---HR 123
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLA 562
V+HR+ K N+L++ E L+D GLA
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR 466
+ +F + IGEG+ G VY+A G+++A+KKI + + +S + L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 467 HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARAL 525
HPNIV L + LV+E++ D+ F D S+ ++ L + L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ H V+HR+ K N+L++ E L+D GLA
Sbjct: 119 AFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 15/172 (8%)
Query: 394 PITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFAN---GKIMAVKKIDNAALSLQ 450
P + Y +A N ++GEG G VY + N KI K +L
Sbjct: 13 PRGSPQYGIAREDVVLNR-----ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLD 67
Query: 451 EEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510
++ F+ M L HP+IV L G E +++ E G L L +S K LT
Sbjct: 68 NKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKVLT 126
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
V +L +A+ YL + + VHR+ NIL+ L D GL+
Sbjct: 127 ---LVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLS 172
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Query: 417 LIGEGSLGRVYRAEFANGKIM-AVKKIDNAALSLQEEDNFLEAVSN--MSRLRHPNIVTL 473
+IG+GS G+V A ++ AVK + A+ ++E+ + + N + ++HP +V L
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRV-ALGTARALEYLHEVC 532
+ V +Y+ G L F + R R A A AL YLH +
Sbjct: 105 HFSFQTADKLYFVLDYINGGEL-----FYHLQRERCFLEPRARFYAAEIASALGYLHSL- 158
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
++V+R+ K NILLD + + L+D GL N E T T
Sbjct: 159 --NIVYRDLKPENILLDSQGHIVLTDFGLC--KENIEHNSTTST 198
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR 466
+ +F + IGEG+ G VY+A G+++A+KKI + + +S + L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 467 HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARAL 525
HPNIV L + LV+E++ D+ F D S+ ++ L + L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ H V+HR+ K N+L++ E L+D GLA
Sbjct: 119 AFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 9/147 (6%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IGEG+ G VY+A G+++A+KKI + + +S + L HPNIV L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARALEYLHEVCLPS 535
+ LV+E++ D+ F D S+ ++ L + L + H
Sbjct: 70 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 122
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLA 562
V+HR+ K N+L++ E L+D GLA
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEA-VSNMSRLRHPNIVTL--A 474
+G+G G V+R + G+ +AVK S E+ F E + N LRH NI+ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFS----SRDEKSWFRETELYNTVMLRHENILGFIAS 70
Query: 475 GYCAEHG--QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
+ H Q L+ Y G+L+D L + + +R+ L A L +LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIEI 125
Query: 533 L-----PSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITG 575
P++ HR+ KS NIL+ ++D GLA + + Q+ G
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG 173
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 9/147 (6%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IGEG+ G VY+A G+++A+KKI + + +S + L HPNIV L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARALEYLHEVCLPS 535
+ LV+E++ D+ F D S+ ++ L + L + H
Sbjct: 70 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 122
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLA 562
V+HR+ K N+L++ E L+D GLA
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 410 NSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHP 468
+F + IGEG+ G VY+A G+++A+KKI + + +S + L HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 469 NIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARALEY 527
NIV L + LV+E+V D+ F D S+ ++ L + L +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQ----DLKTFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 528 LHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
H V+HR+ K N+L++ E L+D GLA
Sbjct: 118 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR 466
+ +F + IGEG+ G VY+A G+++A+KKI + + +S + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 467 HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARAL 525
HPNIV L + LV+E++ D+ F D S+ ++ L + L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ H V+HR+ K N+L++ E L+D GLA
Sbjct: 117 AFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR 466
+ +F + IGEG+ G VY+A G+++A+KKI + + +S + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 467 HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARAL 525
HPNIV L + LV+E++ D+ F D S+ ++ L + L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ H V+HR+ K N+L++ E L+D GLA
Sbjct: 117 AFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 417 LIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG 475
++G G+ V AE K++A+K I AL +E + ++ + +++HPNIV L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALE-GKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
G L+ + V G L D + T R+ A++YLH++
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIV----EKGFYTERDASRLIFQVLDAVKYLHDL---G 136
Query: 536 VVHRNFKSANIL---LDDELNPHLSDCGLAAL 564
+VHR+ K N+L LD++ +SD GL+ +
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 401 TVASLQTATNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDN---FL 456
++ S+ +++ IG+G+ G VY A + A G+ +A+++ ++LQ++ +
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQ-----MNLQQQPKKELII 65
Query: 457 EAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVR 516
+ M ++PNIV + +V EY+ G+L D++ + +
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQIAA 120
Query: 517 VALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA-LTP-NTERQVIT 574
V +ALE+LH V+HR+ KS NILL + + L+D G A +TP ++R +
Sbjct: 121 VCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV 177
Query: 575 GT 576
GT
Sbjct: 178 GT 179
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR 466
+ +F + IGEG+ G VY+A G+++A+KKI + + +S + L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 467 HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARAL 525
HPNIV L + LV+E++ D+ F D S+ ++ L + L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ H V+HR+ K N+L++ E L+D GLA
Sbjct: 118 AFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR 466
+ +F + IGEG+ G VY+A G+++A+KKI + + +S + L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 467 HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARAL 525
HPNIV L + LV+E++ D+ F D S+ ++ L + L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ H V+HR+ K N+L++ E L+D GLA
Sbjct: 119 AFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLA 152
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR 466
+ +F + IGEG+ G VY+A G+++A+KKI + + +S + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 467 HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARAL 525
HPNIV L + LV+E++ D+ F D S+ ++ L + L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ H V+HR+ K N+L++ E L+D GLA
Sbjct: 117 AFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 9/147 (6%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IGEG+ G VY+A G+++A+KKI + + +S + L HPNIV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARALEYLHEVCLPS 535
+ LV+E++ D+ F D S+ ++ L + L + H
Sbjct: 71 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 123
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLA 562
V+HR+ K N+L++ E L+D GLA
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 9/147 (6%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IGEG+ G VY+A G+++A+KKI + + +S + L HPNIV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARALEYLHEVCLPS 535
+ LV+E++ D+ F D S+ ++ L + L + H
Sbjct: 71 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 123
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLA 562
V+HR+ K N+L++ E L+D GLA
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 9/147 (6%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IGEG+ G VY+A G+++A+KKI + + +S + L HPNIV L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARALEYLHEVCLPS 535
+ LV+E++ D+ F D S+ ++ L + L + H
Sbjct: 70 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 122
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLA 562
V+HR+ K N+L++ E L+D GLA
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 9/147 (6%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IGEG+ G VY+A G+++A+KKI + + +S + L HPNIV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARALEYLHEVCLPS 535
+ LV+E++ D+ F D S+ ++ L + L + H
Sbjct: 71 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 123
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLA 562
V+HR+ K N+L++ E L+D GLA
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 9/147 (6%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IGEG+ G VY+A G+++A+KKI + + +S + L HPNIV L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARALEYLHEVCLPS 535
+ LV+E++ D+ F D S+ ++ L + L + H
Sbjct: 70 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 122
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLA 562
V+HR+ K N+L++ E L+D GLA
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 417 LIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG 475
++G G+ V AE K++A+K I AL +E + ++ + +++HPNIV L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALE-GKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
G L+ + V G L D + T R+ A++YLH++
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIV----EKGFYTERDASRLIFQVLDAVKYLHDL---G 136
Query: 536 VVHRNFKSANIL---LDDELNPHLSDCGLAAL 564
+VHR+ K N+L LD++ +SD GL+ +
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR 466
+ +F + IGEG+ G VY+A G+++A+KKI + + +S + L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 467 HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARAL 525
HPNIV L + LV+E++ D+ F D S+ ++ L + L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ H V+HR+ K N+L++ E L+D GLA
Sbjct: 118 AFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLA 151
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 9/147 (6%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IGEG+ G VY+A G+++A+KKI + + +S + L HPNIV L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARALEYLHEVCLPS 535
+ LV+E++ D+ F D S+ ++ L + L + H
Sbjct: 72 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 124
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLA 562
V+HR+ K N+L++ E L+D GLA
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 415 EFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHP 468
++ +GEG+ G+V+ AE N ++AVK + A+ S ++ +F ++ L+H
Sbjct: 17 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ--DFQREAELLTMLQHQ 74
Query: 469 NIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVA-LGTARALEY 527
+IV G C E L+V+EY+ +G+L+ L +K L V LG + L
Sbjct: 75 HIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 528 LHEVCLPSV-------VHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGTS 577
+V V VHR+ + N L+ L + D G++ +T+ + G +
Sbjct: 135 ASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 191
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 410 NSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHP 468
+F + IGEG+ G VY+A G+++A+KKI + + +S + L HP
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 469 NIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARALEY 527
NIV L + LV+E++ D+ F D S+ ++ L + L +
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 528 LHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
H V+HR+ K N+L++ E L+D GLA
Sbjct: 123 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 154
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 10/149 (6%)
Query: 417 LIGEGSLGRVYRAEFAN---GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL 473
++GEG G VY + N KI K +L ++ F+ M L HP+IV L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
G E +++ E G L L +S K LT V +L +A+ YL +
Sbjct: 75 IGIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKAMAYLESI-- 128
Query: 534 PSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ VHR+ NIL+ L D GL+
Sbjct: 129 -NCVHRDIAVRNILVASPECVKLGDFGLS 156
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 10/149 (6%)
Query: 417 LIGEGSLGRVYRAEFAN---GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL 473
++GEG G VY + N KI K +L ++ F+ M L HP+IV L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
G E +++ E G L L +S K LT V +L +A+ YL +
Sbjct: 79 IGIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKAMAYLESI-- 132
Query: 534 PSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ VHR+ NIL+ L D GL+
Sbjct: 133 -NCVHRDIAVRNILVASPECVKLGDFGLS 160
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR 466
+ +F + IGEG+ G VY+A G+++A+KKI + + +S + L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 467 HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARAL 525
HPNIV L + LV+E++ D+ F D S+ ++ L + L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSM----DLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ H V+HR+ K N+L++ E L+D GLA
Sbjct: 118 AFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLA 151
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR 466
+ +F + IGEG+ G VY+A G+++A+KKI + + +S + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 467 HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARAL 525
HPNIV L + LV+E++ D+ F D S+ ++ L + L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSM----DLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ H V+HR+ K N+L++ E L+D GLA
Sbjct: 120 AFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLA 153
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 415 EFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHP 468
++ +GEG+ G+V+ AE N ++AVK + A+ S ++ +F ++ L+H
Sbjct: 23 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ--DFQREAELLTMLQHQ 80
Query: 469 NIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVA-LGTARALEY 527
+IV G C E L+V+EY+ +G+L+ L +K L V LG + L
Sbjct: 81 HIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 528 LHEVCLPSV-------VHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGTS 577
+V V VHR+ + N L+ L + D G++ +T+ + G +
Sbjct: 141 ASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 197
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR 466
+ +F + IGEG+ G VY+A G+++A+KKI + + +S + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 467 HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARAL 525
HPNIV L + LV+E++ D+ F D S+ ++ L + L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ----DLKDFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ H V+HR+ K N+L++ E L+D GLA
Sbjct: 117 AFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLA 150
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 403 ASLQTATN-----SFSQEFL-IGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNF 455
A+LQ + S+ F+ IGEGS G V A ++GK++AVKK+D L Q+
Sbjct: 7 AALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRREL 63
Query: 456 L-EAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNAR 514
L V M +H N+V + + +V E++ G L D++ + + +
Sbjct: 64 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---- 119
Query: 515 VRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT--ERQV 572
V L +AL LH V+HR+ KS +ILL + LSD G A R+
Sbjct: 120 -AVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX 175
Query: 573 ITGT 576
+ GT
Sbjct: 176 LVGT 179
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR 466
+ +F + IGEG+ G VY+A G+++A+KKI + + +S + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 467 HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARAL 525
HPNIV L + LV+E++ D+ F D S+ ++ L + L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ----DLKTFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ H V+HR+ K N+L++ E L+D GLA
Sbjct: 120 AFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 16/151 (10%)
Query: 435 KIMAVKKID---NAALSLQEEDNFLEA-VSNMSRLR----HPNIVTLAGYCAEHGQRLLV 486
K AVK ID + S +E EA + + LR HPNI+ L + LV
Sbjct: 30 KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 89
Query: 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANI 546
++ + G L D L L+ ++ + LH++ ++VHR+ K NI
Sbjct: 90 FDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENI 142
Query: 547 LLDDELNPHLSDCGLAA-LTPNTERQVITGT 576
LLDD++N L+D G + L P + + + GT
Sbjct: 143 LLDDDMNIKLTDFGFSCQLDPGEKLREVCGT 173
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR 466
+ +F + IGEG+ G VY+A G+++A+KKI + + +S + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 467 HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARAL 525
HPNIV L + LV+E++ D+ F D S+ ++ L + L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSM----DLKDFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ H V+HR+ K N+L++ E L+D GLA
Sbjct: 120 AFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 403 ASLQTATN-----SFSQEFL-IGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNF 455
A+LQ + S+ F+ IGEGS G V A ++GK++AVKK+D L Q+
Sbjct: 11 AALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRREL 67
Query: 456 L-EAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNAR 514
L V M +H N+V + + +V E++ G L D++ + + +
Sbjct: 68 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---- 123
Query: 515 VRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT--ERQV 572
V L +AL LH V+HR+ KS +ILL + LSD G A R+
Sbjct: 124 -AVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX 179
Query: 573 ITGT 576
+ GT
Sbjct: 180 LVGT 183
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 417 LIGEGSLGRVYRA----EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
++G G+ G VY+ E KI KI N + F++ M+ + HP++V
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 104
Query: 473 LAGYCAEHGQRLLVYEYVGNGNLHDMLH-FADDSSKNLTWNARVRVALGTARALEYLHEV 531
L G C +L V + + +G L + +H D+ L N V++A G + YL E
Sbjct: 105 LLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKG----MMYLEER 159
Query: 532 CLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
L VHR+ + N+L+ + ++D GLA L E++
Sbjct: 160 RL---VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE 196
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 16/167 (9%)
Query: 405 LQTATNSFSQEF----LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQ-EEDNFLEA 458
+Q +T FS + ++G+GS G V + G+ AVK I + + ++++ L
Sbjct: 23 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 82
Query: 459 VSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVA 518
V + +L HPNI+ L + + G LV E G L D + S K + R+
Sbjct: 83 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAARII 138
Query: 519 LGTARALEYLHEVCLPSVVHRNFKSANILLD---DELNPHLSDCGLA 562
+ Y+H+ +VHR+ K N+LL+ + N + D GL+
Sbjct: 139 RQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS 182
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR 466
+ +F + IGEG+ G VY+A G+++A+KKI + + +S + L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 467 HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARAL 525
HPNIV L + LV+E++ D+ F D S+ ++ L + L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSM----DLKDFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ H V+HR+ K N+L++ E L+D GLA
Sbjct: 119 AFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 410 NSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHP 468
+ + + +IG G+ V A A K +A+K+I N D L+ + MS+ HP
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRI-NLEKCQTSMDELLKEIQAMSQCHHP 68
Query: 469 NIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHF----ADDSSKNLTWNARVRVALGTARA 524
NIV+ + LV + + G++ D++ + S L + +
Sbjct: 69 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA-------LTPNTERQVITGT 576
LEYLH+ +HR+ K+ NILL ++ + ++D G++A +T N R+ GT
Sbjct: 129 LEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 25/166 (15%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEED----NFLEAVSNMSRLR----HPN 469
+GEG+ G+V AE K+ A+ + ++D + + VS M ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDML--------HFADD----SSKNLTWNARVRV 517
I+ L G C + G ++ Y GNL + L ++ D + +T+ V
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 518 ALGTARALEYL-HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
AR +EYL + C +HR+ + N+L+ + ++D GLA
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 26/223 (11%)
Query: 368 DLTPPPA----EKLVIERVAKSGSLKKIKSPITATSYTVASLQTATN-----SFSQEFL- 417
D PPPA E + E+ S ++ ++ + A+LQ + S+ F+
Sbjct: 100 DSPPPPARARQENGMPEKPPGPRSPQREPQRVSHEQFR-AALQLVVDPGDPRSYLDNFIK 158
Query: 418 IGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFL-EAVSNMSRLRHPNIVTLAG 475
IGEGS G V A ++GK++AVKK+D L Q+ L V M +H N+V +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYN 215
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
+ +V E++ G L D++ + + + V L +AL LH
Sbjct: 216 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-----VCLAVLQALSVLHAQ---G 267
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLAALTPN--TERQVITGT 576
V+HR+ KS +ILL + LSD G A R+ + GT
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT 310
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 16/167 (9%)
Query: 405 LQTATNSFSQEF----LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQ-EEDNFLEA 458
+Q +T FS + ++G+GS G V + G+ AVK I + + ++++ L
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 459 VSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVA 518
V + +L HPNI+ L + + G LV E G L D + S K + R+
Sbjct: 77 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSEVDAARII 132
Query: 519 LGTARALEYLHEVCLPSVVHRNFKSANILLD---DELNPHLSDCGLA 562
+ Y+H+ +VHR+ K N+LL+ + N + D GL+
Sbjct: 133 RQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 30/176 (17%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNM 462
SL+ A++ F + ++G+G+ G+V +A A + + A+KKI + L L V +
Sbjct: 1 SLRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS---TILSEVMLL 56
Query: 463 SRLRHPNIVTLAGYCAEHGQRLLV---------------YEYVGNGNLHDMLHFAD-DSS 506
+ L H +V Y A +R V EY N L+D++H + +
Sbjct: 57 ASLNHQYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQ 114
Query: 507 KNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
++ W R+ AL Y+H ++HR+ K NI +D+ N + D GLA
Sbjct: 115 RDEYW----RLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLA 163
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 16/151 (10%)
Query: 435 KIMAVKKID---NAALSLQEEDNFLEA-VSNMSRLR----HPNIVTLAGYCAEHGQRLLV 486
K AVK ID + S +E EA + + LR HPNI+ L + LV
Sbjct: 43 KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 102
Query: 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANI 546
++ + G L D L L+ ++ + LH++ ++VHR+ K NI
Sbjct: 103 FDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENI 155
Query: 547 LLDDELNPHLSDCGLAA-LTPNTERQVITGT 576
LLDD++N L+D G + L P + + + GT
Sbjct: 156 LLDDDMNIKLTDFGFSCQLDPGEKLRSVCGT 186
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 418 IGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFL-EAVSNMSRLRHPNIVTLAG 475
IGEGS G V A ++GK++AVKK+D L Q+ L V M +H N+V +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYN 95
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
+ +V E++ G L D++ + + + V L +AL LH
Sbjct: 96 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ---G 147
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLAALTPNT--ERQVITGT 576
V+HR+ KS +ILL + LSD G A R+ + GT
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT 190
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 16/151 (10%)
Query: 435 KIMAVKKID---NAALSLQEEDNFLEA-VSNMSRLR----HPNIVTLAGYCAEHGQRLLV 486
K AVK ID + S +E EA + + LR HPNI+ L + LV
Sbjct: 43 KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 102
Query: 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANI 546
++ + G L D L L+ ++ + LH++ ++VHR+ K NI
Sbjct: 103 FDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENI 155
Query: 547 LLDDELNPHLSDCGLAA-LTPNTERQVITGT 576
LLDD++N L+D G + L P + + + GT
Sbjct: 156 LLDDDMNIKLTDFGFSCQLDPGEKLREVCGT 186
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 418 IGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFL-EAVSNMSRLRHPNIVTLAG 475
IGEGS G V A ++GK++AVKK+D L Q+ L V M +H N+V +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYN 93
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
+ +V E++ G L D++ + + + V L +AL LH
Sbjct: 94 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ---G 145
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLAALTPNT--ERQVITGT 576
V+HR+ KS +ILL + LSD G A R+ + GT
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT 188
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 16/167 (9%)
Query: 405 LQTATNSFSQEF----LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQ-EEDNFLEA 458
+Q +T FS + ++G+GS G V + G+ AVK I + + ++++ L
Sbjct: 40 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 99
Query: 459 VSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVA 518
V + +L HPNI+ L + + G LV E G L D + S K + R+
Sbjct: 100 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSEVDAARII 155
Query: 519 LGTARALEYLHEVCLPSVVHRNFKSANILLD---DELNPHLSDCGLA 562
+ Y+H+ +VHR+ K N+LL+ + N + D GL+
Sbjct: 156 RQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS 199
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 417 LIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+IG GS G V++A+ +A+KK+ LQ++ + M ++HPN+V L +
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKV------LQDKRFKNRELQIMRIVKHPNVVDLKAF 100
Query: 477 CAEHGQRL------LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARALEYLH 529
+G + LV EYV H+A K +++ + R+L Y+H
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPETVYRASRHYA--KLKQTMPMLLIKLYMYQLLRSLAYIH 158
Query: 530 EVCLPSVVHRNFKSANILLD 549
+ + HR+ K N+LLD
Sbjct: 159 SI---GICHRDIKPQNLLLD 175
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 16/167 (9%)
Query: 405 LQTATNSFSQEF----LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQ-EEDNFLEA 458
+Q +T FS + ++G+GS G V + G+ AVK I + + ++++ L
Sbjct: 41 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 100
Query: 459 VSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVA 518
V + +L HPNI+ L + + G LV E G L D + S K + R+
Sbjct: 101 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSEVDAARII 156
Query: 519 LGTARALEYLHEVCLPSVVHRNFKSANILLD---DELNPHLSDCGLA 562
+ Y+H+ +VHR+ K N+LL+ + N + D GL+
Sbjct: 157 RQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS 200
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 410 NSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHP 468
+ + + +IG G+ V A A K +A+K+I N D L+ + MS+ HP
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRI-NLEKCQTSMDELLKEIQAMSQCHHP 73
Query: 469 NIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHF----ADDSSKNLTWNARVRVALGTARA 524
NIV+ + LV + + G++ D++ + S L + +
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA-------LTPNTERQVITGT 576
LEYLH+ +HR+ K+ NILL ++ + ++D G++A +T N R+ GT
Sbjct: 134 LEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 6/162 (3%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVS-N 461
S++ + +G G+ G V + +G+IMAVK+I A ++ QE+ L + +
Sbjct: 1 SMEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRI-RATVNSQEQKRLLMDLDIS 59
Query: 462 MSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGT 521
M + P VT G G + E + + +L D + + + ++A+
Sbjct: 60 MRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSI 118
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563
+ALE+LH SV+HR+ K +N+L++ + D G++
Sbjct: 119 VKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISG 158
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 30/164 (18%)
Query: 418 IGEGSLGRV--YRAEFAN---GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
+GEG G+V Y + N G+++AVK + Q + + + L H +IV
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGC-GPQLRSGWQREIEILRTLYHEHIVK 75
Query: 473 LAGYCAEHGQR--LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE 530
G C + G++ LV EYV G+L D L R +G A+ L + +
Sbjct: 76 YKGCCEDQGEKSVQLVMEYVPLGSLRDYL---------------PRHCVGLAQLLLFAQQ 120
Query: 531 VC-------LPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567
+C +HR + N+LLD++ + D GLA P
Sbjct: 121 ICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE 164
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 25/166 (15%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEED----NFLEAVSNMSRLR----HPN 469
+GEG+ G+V AE K+ A+ + ++D + + VS M ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDML--------HFADD----SSKNLTWNARVRV 517
I+ L G C + G ++ Y GNL + L ++ D + +T+ V
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 518 ALGTARALEYL-HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
AR +EYL + C +HR+ + N+L+ + ++D GLA
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 30/164 (18%)
Query: 418 IGEGSLGRV--YRAEFAN---GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
+GEG G+V Y + N G+++AVK + Q + + + L H +IV
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGC-GPQLRSGWQREIEILRTLYHEHIVK 74
Query: 473 LAGYCAEHGQR--LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE 530
G C + G++ LV EYV G+L D L R +G A+ L + +
Sbjct: 75 YKGCCEDQGEKSVQLVMEYVPLGSLRDYL---------------PRHCVGLAQLLLFAQQ 119
Query: 531 VC-------LPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567
+C +HR + N+LLD++ + D GLA P
Sbjct: 120 ICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE 163
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQ-EEDNFLEAVSNMSRLRHPNIVTLAG 475
+G+G G VY A E + I+A+K + + + + E + + L HPNI+ L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNAR--VRVALGTARALEYLHEVCL 533
Y + + L+ EY G L+ L K+ T++ + + A AL Y H
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKEL------QKSCTFDEQRTATIMEELADALMYCHG--- 141
Query: 534 PSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
V+HR+ K N+LL + ++D G + P+ R+ + GT
Sbjct: 142 KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGT 184
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 417 LIGEGSLGRVYRA----EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
++G G+ G VY+ E KI KI N + F++ M+ + HP++V
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 473 LAGYCAEHGQRLLVYEYVGNGNLHDMLH-FADDSSKNLTWNARVRVALGTARALEYLHEV 531
L G C +L V + + +G L + +H D+ L N V++A G + YL E
Sbjct: 82 LLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKG----MMYLEER 136
Query: 532 CLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
L VHR+ + N+L+ + ++D GLA L E++
Sbjct: 137 RL---VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE 173
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 418 IGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFL-EAVSNMSRLRHPNIVTLAG 475
IGEGS G V A ++GK++AVKK+D L Q+ L V M +H N+V +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYN 138
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
+ +V E++ G L D++ + + + V L +AL LH
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ---G 190
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLAALTPN--TERQVITGT 576
V+HR+ KS +ILL + LSD G A R+ + GT
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT 233
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 19/176 (10%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALS----LQEEDNFLEAVSNMSRL-RHPNIV 471
+G G+ G+V A F GK AV K+ L E++ + + MS L +H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH-- 529
L G C G L++ EY G D+L+F S+ L + +A T + LH
Sbjct: 114 NLLGACTHGGPVLVITEYCCYG---DLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFS 170
Query: 530 --------EVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGTS 577
+ + +HR+ + N+LL + + D GLA N ++ G +
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
S++ +IG GS G VY+A+ + G+++A+KK+ LQ++ + M +L H N
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCN 110
Query: 470 IVTLAGYCAEHGQRL------LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA- 522
IV L + G++ LV +YV H++ +K V++ +
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS--RAKQTLPVIYVKLYMYQLF 168
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDE 551
R+L Y+H + HR+ K N+LLD +
Sbjct: 169 RSLAYIHSF---GICHRDIKPQNLLLDPD 194
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
S++ +IG GS G VY+A+ + G+++A+KK+ LQ++ + M +L H N
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCN 112
Query: 470 IVTLAGYCAEHGQRL------LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA- 522
IV L + G++ LV +YV H++ +K V++ +
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS--RAKQTLPVIYVKLYMYQLF 170
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDE 551
R+L Y+H + HR+ K N+LLD +
Sbjct: 171 RSLAYIHSF---GICHRDIKPQNLLLDPD 196
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 6/148 (4%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVS-NMSRLRHPNIVTLAG 475
+G G+ G V + +G+IMAVK+I A ++ QE+ L + +M + P VT G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRI-RATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
G + E + + +L D + + + ++A+ +ALE+LH S
Sbjct: 118 ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--S 174
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLAA 563
V+HR+ K +N+L++ + D G++
Sbjct: 175 VIHRDVKPSNVLINALGQVKMCDFGISG 202
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
IG+GS G VY+ + K + KI + + E ++ + ++ +S+ P I G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
+ + ++ EY+G G+ D+L L + + L+YLH +
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLL-----KPGPLEETYIATILREILKGLDYLHS---ERKI 138
Query: 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTE--RQVITGT 576
HR+ K+AN+LL ++ + L+D G+A +T+ R GT
Sbjct: 139 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGT 179
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 418 IGEGSLGRV--YRAEFAN---GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
+GEG G+V Y + N G+++AVK + A Q + + + + L H +I+
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADAGPQHRSGWKQEIDILRTLYHEHIIK 97
Query: 473 LAGYCAEHGQR--LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE 530
G C + G LV EYV G+L D L R ++G A+ L + +
Sbjct: 98 YKGCCEDAGAASLQLVMEYVPLGSLRDYL---------------PRHSIGLAQLLLFAQQ 142
Query: 531 VC-------LPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567
+C +HR+ + N+LLD++ + D GLA P
Sbjct: 143 ICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMS 463
+ + S E +G G G V+ A + +AVK + ++S++ FL + M
Sbjct: 9 AWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE---AFLAEANVMK 65
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR 523
L+H +V L + ++ E++ G+L D L + S + L + + A
Sbjct: 66 TLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAE 122
Query: 524 ALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
+ ++ + + +HR+ ++ANIL+ L ++D GLA + + E
Sbjct: 123 GMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 165
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
S++ +IG GS G VY+A+ + G+++A+KK+ LQ++ + M +L H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCN 108
Query: 470 IVTLAGYCAEHGQRL------LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA- 522
IV L + G++ LV +YV H++ +K V++ +
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS--RAKQTLPVIYVKLYMYQLF 166
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDE 551
R+L Y+H + HR+ K N+LLD +
Sbjct: 167 RSLAYIHSF---GICHRDIKPQNLLLDPD 192
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
S++ +IG GS G VY+A+ + G+++A+KK+ LQ++ + M +L H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCN 108
Query: 470 IVTLAGYCAEHGQRL------LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA- 522
IV L + G++ LV +YV H++ +K V++ +
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS--RAKQTLPVIYVKLYMYQLF 166
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDE 551
R+L Y+H + HR+ K N+LLD +
Sbjct: 167 RSLAYIHSF---GICHRDIKPQNLLLDPD 192
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
S++ +IG GS G VY+A+ + G+++A+KK+ LQ++ + M +L H N
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCN 102
Query: 470 IVTLAGYCAEHGQRL------LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA- 522
IV L + G++ LV +YV H++ +K V++ +
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS--RAKQTLPVIYVKLYMYQLF 160
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDE 551
R+L Y+H + HR+ K N+LLD +
Sbjct: 161 RSLAYIHSF---GICHRDIKPQNLLLDPD 186
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 11/163 (6%)
Query: 403 ASLQTATNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN 461
A + N F L+G+G+ G+V E A G+ A+K + + ++E S
Sbjct: 1 ARAKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 60
Query: 462 -MSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRV-AL 519
+ RHP + L H + V EY G L F S + + R R
Sbjct: 61 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL-----FFHLSRERVFTEERARFYGA 115
Query: 520 GTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
ALEYLH VV+R+ K N++LD + + ++D GL
Sbjct: 116 EIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLC 155
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
S++ +IG GS G VY+A+ + G+++A+KK+ LQ++ + M +L H N
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCN 79
Query: 470 IVTLAGYCAEHGQRL------LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA- 522
IV L + G++ LV +YV H++ +K V++ +
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS--RAKQTLPVIYVKLYMYQLF 137
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDE 551
R+L Y+H + HR+ K N+LLD +
Sbjct: 138 RSLAYIHSF---GICHRDIKPQNLLLDPD 163
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
S++ +IG GS G VY+A+ + G+++A+KK+ LQ++ + M +L H N
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCN 153
Query: 470 IVTLAGYCAEHGQRL------LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA- 522
IV L + G++ LV +YV H++ +K V++ +
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS--RAKQTLPVIYVKLYMYQLF 211
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDE 551
R+L Y+H + HR+ K N+LLD +
Sbjct: 212 RSLAYIHSF---GICHRDIKPQNLLLDPD 237
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 24/161 (14%)
Query: 418 IGEGSLGRVYRA-EFANG-KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH------PN 469
IGEG+ G+V++A + NG + +A+K++ + EE L + ++ LRH PN
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV---RVQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 470 IVTLAGYCA-----EHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVR-VALGTAR 523
+V L C + LV+E+V D+ + D + ++ + R
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQ----DLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 524 ALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
L++LH VVHR+ K NIL+ L+D GLA +
Sbjct: 132 GLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMS 463
+ + S E +G G G V+ A + +AVK + ++S++ FL + M
Sbjct: 182 AWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE---AFLAEANVMK 238
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR 523
L+H +V L + ++ E++ G+L D L + S + L + + A
Sbjct: 239 TLQHDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAE 295
Query: 524 ALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569
+ ++ + + +HR+ ++ANIL+ L ++D GLA + + E
Sbjct: 296 GMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 24/161 (14%)
Query: 418 IGEGSLGRVYRA-EFANG-KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH------PN 469
IGEG+ G+V++A + NG + +A+K++ + EE L + ++ LRH PN
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV---RVQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 470 IVTLAGYCA-----EHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVR-VALGTAR 523
+V L C + LV+E+V D+ + D + ++ + R
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQ----DLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 524 ALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
L++LH VVHR+ K NIL+ L+D GLA +
Sbjct: 132 GLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
S++ +IG GS G VY+A+ + G+++A+KK+ LQ++ + M +L H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCN 86
Query: 470 IVTLAGYCAEHGQRL------LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA- 522
IV L + G++ LV +YV H++ +K V++ +
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS--RAKQTLPVIYVKLYMYQLF 144
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDE 551
R+L Y+H + HR+ K N+LLD +
Sbjct: 145 RSLAYIHSF---GICHRDIKPQNLLLDPD 170
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 26/156 (16%)
Query: 421 GSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEA--VSNMSRLRHPNIVTLAGYCA 478
G G V++A+ N + +AVK +Q++ ++ V ++ ++H NI+ G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVK-----IFPIQDKQSWQNEYEVYSLPGMKHENILQFIG-AE 87
Query: 479 EHGQRL-----LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC- 532
+ G + L+ + G+L D L + ++WN +A AR L YLHE
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSDFL-----KANVVSWNELCHIAETMARGLAYLHEDIP 142
Query: 533 ------LPSVVHRNFKSANILLDDELNPHLSDCGLA 562
P++ HR+ KS N+LL + L ++D GLA
Sbjct: 143 GLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 418 IGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEED----NFLEAVSNMSRLRHPNIVT 472
+GEG+ VY+ + ++A+K+I L+ E+ + VS + L+H NIVT
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEI-----RLEHEEGAPCTAIREVSLLKDLKHANIVT 64
Query: 473 LAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
L LV+EY+ D+ + DD + + R L Y H
Sbjct: 65 LHDIIHTEKSLTLVFEYLDK----DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR-- 118
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA 562
V+HR+ K N+L+++ L+D GLA
Sbjct: 119 -QKVLHRDLKPQNLLINERGELKLADFGLA 147
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 22/173 (12%)
Query: 412 FSQEFLIGEGSLGRVYRA-EFANGKIMAVKKID-----NAALSLQEEDNFLEAVSNMSRL 465
F++ IG+GS G V++ + K++A+K ID + +Q+E ++ +S+
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE------ITVLSQC 82
Query: 466 RHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARAL 525
P + G + + ++ EY+G G+ D+L + R + L
Sbjct: 83 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR-----EILKGL 137
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE--RQVITGT 576
+YLH +HR+ K+AN+LL + L+D G+A +T+ R GT
Sbjct: 138 DYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGT 187
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
S++ +IG GS G VY+A+ + G+++A+KK+ LQ++ + M +L H N
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCN 93
Query: 470 IVTLAGYCAEHGQRL------LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA- 522
IV L + G++ LV +YV H++ +K V++ +
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS--RAKQTLPVIYVKLYMYQLF 151
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDE 551
R+L Y+H + HR+ K N+LLD +
Sbjct: 152 RSLAYIHSF---GICHRDIKPQNLLLDPD 177
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
S++ +IG GS G VY+A+ + G+++A+KK+ LQ++ + M +L H N
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCN 82
Query: 470 IVTLAGYCAEHGQRL------LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA- 522
IV L + G++ LV +YV H++ +K V++ +
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS--RAKQTLPVIYVKLYMYQLF 140
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDE 551
R+L Y+H + HR+ K N+LLD +
Sbjct: 141 RSLAYIHSF---GICHRDIKPQNLLLDPD 166
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
S++ +IG GS G VY+A+ + G+++A+KK+ LQ++ + M +L H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCN 74
Query: 470 IVTLAGYCAEHGQRL------LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA- 522
IV L + G++ LV +YV H++ +K V++ +
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYS--RAKQTLPVIYVKLYMYQLF 132
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDE 551
R+L Y+H + HR+ K N+LLD +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPD 158
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
S++ +IG GS G VY+A+ + G+++A+KK+ LQ++ + M +L H N
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCN 87
Query: 470 IVTLAGYCAEHGQRL------LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA- 522
IV L + G++ LV +YV H++ +K V++ +
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS--RAKQTLPVIYVKLYMYQLF 145
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDE 551
R+L Y+H + HR+ K N+LLD +
Sbjct: 146 RSLAYIHSF---GICHRDIKPQNLLLDPD 171
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 12/166 (7%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG 475
++G+GS G V + + + AVK I+ A+ ++ L V + +L HPNI+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
+ +V E G L D + K + + R+ + Y+H+ +
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYMHK---HN 141
Query: 536 VVHRNFKSANILL---DDELNPHLSDCGLA-ALTPNTERQVITGTS 577
+VHR+ K NILL + + + + D GL+ NT+ + GT+
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTA 187
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
S++ +IG GS G VY+A+ + G+++A+KK+ LQ++ + M +L H N
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCN 75
Query: 470 IVTLAGYCAEHGQRL------LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA- 522
IV L + G++ LV +YV H++ +K V++ +
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS--RAKQTLPVIYVKLYMYQLF 133
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDE 551
R+L Y+H + HR+ K N+LLD +
Sbjct: 134 RSLAYIHSF---GICHRDIKPQNLLLDPD 159
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 21/156 (13%)
Query: 417 LIGEGSLGRVYRAEFANG----KIMAVKKIDNAALSLQEEDN-FLEAVSN-MSRLRHPNI 470
++G+G G+V++ G KI A+K + A + +D +A N + ++HP I
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLH----FADDSSKNLTWNARVRVALGTARALE 526
V L G+ L+ EY+ G L L F +D++ + A + +ALG
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTA--CFYLAEISMALG------ 135
Query: 527 YLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+LH+ +++R+ K NI+L+ + + L+D GL
Sbjct: 136 HLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLC 168
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
S++ +IG GS G VY+A+ + G+++A+KK+ LQ++ + M +L H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCN 74
Query: 470 IVTLAGYCAEHGQRL------LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA- 522
IV L + G++ LV +YV H++ +K V++ +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS--RAKQTLPVIYVKLYMYQLF 132
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDE 551
R+L Y+H + HR+ K N+LLD +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPD 158
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
S++ +IG GS G VY+A+ + G+++A+KK+ LQ++ + M +L H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCN 86
Query: 470 IVTLAGYCAEHGQRL------LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA- 522
IV L + G++ LV +YV H++ +K V++ +
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS--RAKQTLPVIYVKLYMYQLF 144
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDE 551
R+L Y+H + HR+ K N+LLD +
Sbjct: 145 RSLAYIHSF---GICHRDIKPQNLLLDPD 170
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
S++ +IG GS G VY+A+ + G+++A+KK+ LQ++ + M +L H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCN 74
Query: 470 IVTLAGYCAEHGQRL------LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA- 522
IV L + G++ LV +YV H++ +K V++ +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS--RAKQTLPVIYVKLYMYQLF 132
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDE 551
R+L Y+H + HR+ K N+LLD +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPD 158
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 21/156 (13%)
Query: 417 LIGEGSLGRVYRAEFANG----KIMAVKKIDNAALSLQEEDN-FLEAVSN-MSRLRHPNI 470
++G+G G+V++ G KI A+K + A + +D +A N + ++HP I
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLH----FADDSSKNLTWNARVRVALGTARALE 526
V L G+ L+ EY+ G L L F +D++ + A + +ALG
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTA--CFYLAEISMALG------ 135
Query: 527 YLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+LH+ +++R+ K NI+L+ + + L+D GL
Sbjct: 136 HLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLC 168
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 16/142 (11%)
Query: 418 IGEGSLGRVY---RAEFAN-GKI----MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
+G+G+ +++ R E + G++ + +K +D A + E +F EA S MS+L H +
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSE--SFFEAASMMSKLSHKH 73
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH 529
+V G C + +LV E+V G+L L + + N+ W ++ VA A A+ +L
Sbjct: 74 LVLNYGVCVCGDENILVQEFVKFGSLDTYLK-KNKNCINILW--KLEVAKQLAAAMHFLE 130
Query: 530 EVCLPSVVHRNFKSANILLDDE 551
E L +H N + NILL E
Sbjct: 131 ENTL---IHGNVCAKNILLIRE 149
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
S++ +IG GS G VY+A+ + G+++A+KK+ LQ++ + M +L H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCN 74
Query: 470 IVTLAGYCAEHGQRL------LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA- 522
IV L + G++ LV +YV H++ +K V++ +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS--RAKQTLPVIYVKLYMYQLF 132
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDE 551
R+L Y+H + HR+ K N+LLD +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPD 158
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 24/161 (14%)
Query: 418 IGEGSLGRVYRA-EFANG-KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH------PN 469
IGEG+ G+V++A + NG + +A+K++ + EE L + ++ LRH PN
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV---RVQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 470 IVTLAGYCA-----EHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVR-VALGTAR 523
+V L C + LV+E+V D+ + D + ++ + R
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQ----DLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 524 ALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
L++LH VVHR+ K NIL+ L+D GLA +
Sbjct: 132 GLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
S++ +IG GS G VY+A+ + G+++A+KK+ LQ++ + M +L H N
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCN 78
Query: 470 IVTLAGYCAEHGQRL------LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA- 522
IV L + G++ LV +YV H++ +K V++ +
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS--RAKQTLPVIYVKLYMYQLF 136
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDE 551
R+L Y+H + HR+ K N+LLD +
Sbjct: 137 RSLAYIHSF---GICHRDIKPQNLLLDPD 162
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 17/157 (10%)
Query: 417 LIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDN--FLEAVSNMSRLR-HPNIVT 472
++ EG VY A+ +G+ A+K++ LS +EE N ++ V M +L HPNIV
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRL----LSNEEEKNRAIIQEVCFMKKLSGHPNIVQ 90
Query: 473 LAGYCA------EHGQ-RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARAL 525
+ + GQ L+ + G L + L +S L+ + +++ T RA+
Sbjct: 91 FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLK-KMESRGPLSCDTVLKIFYQTCRAV 149
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+++H P ++HR+ K N+LL ++ L D G A
Sbjct: 150 QHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 11/160 (6%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MS 463
+ N F L+G+G+ G+V E A G+ A+K + + ++E S +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRV-ALGTA 522
RHP + L H + V EY G L F S + + R R
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL-----FFHLSRERVFTEERARFYGAEIV 115
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
ALEYLH VV+R+ K N++LD + + ++D GL
Sbjct: 116 SALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLC 152
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 11/160 (6%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MS 463
+ N F L+G+G+ G+V E A G+ A+K + + ++E S +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRV-ALGTA 522
RHP + L H + V EY G L F S + + R R
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL-----FFHLSRERVFTEERARFYGAEIV 115
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
ALEYLH VV+R+ K N++LD + + ++D GL
Sbjct: 116 SALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLC 152
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 12/166 (7%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG 475
++G+GS G V + + + AVK I+ A+ ++ L V + +L HPNI+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
+ +V E G L D + K + + R+ + Y+H+ +
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYMHK---HN 141
Query: 536 VVHRNFKSANILL---DDELNPHLSDCGLA-ALTPNTERQVITGTS 577
+VHR+ K NILL + + + + D GL+ NT+ + GT+
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTA 187
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 418 IGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471
+GEG+ G+V+ AE N ++AVK + + L+ ++ +F ++ L+H +IV
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARK--DFQREAELLTNLQHEHIV 80
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH-- 529
G C + ++V+EY+ +G+L+ L A + + + R A G + LH
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKFLR-AHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 530 ------EVCLPS--VVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGTS 577
V L S VHR+ + N L+ L + D G++ +T+ + G +
Sbjct: 140 SQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 24/174 (13%)
Query: 412 FSQEFLIGEGSLGRVYRA-EFANGKIMAVKKID-----NAALSLQEEDNFLEAVSNMSRL 465
F++ IG+GS G V++ + K++A+K ID + +Q+E ++ +S+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE------ITVLSQC 62
Query: 466 RHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD-DSSKNLTWNARVRVALGTARA 524
P + G + + ++ EY+G G+ D+L D ++ T + +
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIAT------ILREILKG 116
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE--RQVITGT 576
L+YLH +HR+ K+AN+LL + L+D G+A +T+ R GT
Sbjct: 117 LDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGT 167
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 9/147 (6%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IGEG+ G VY+A G+++A+ KI + + +S + L HPNIV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARALEYLHEVCLPS 535
+ LV+E++ D+ F D S+ ++ L + L + H
Sbjct: 71 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 123
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLA 562
V+HR+ K N+L++ E L+D GLA
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 9/147 (6%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IGEG+ G VY+A G+++A+ KI + + +S + L HPNIV L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARALEYLHEVCLPS 535
+ LV+E++ D+ F D S+ ++ L + L + H
Sbjct: 70 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 122
Query: 536 VVHRNFKSANILLDDELNPHLSDCGLA 562
V+HR+ K N+L++ E L+D GLA
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 12/166 (7%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG 475
++G+GS G V + + + AVK I+ A+ ++ L V + +L HPNI+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
+ +V E G L D + K + + R+ + Y+H+ +
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYMHK---HN 141
Query: 536 VVHRNFKSANILL---DDELNPHLSDCGLA-ALTPNTERQVITGTS 577
+VHR+ K NILL + + + + D GL+ NT+ + GT+
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTA 187
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 11/160 (6%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MS 463
+ N F L+G+G+ G+V E A G+ A+K + + ++E S +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRV-ALGTA 522
RHP + L H + V EY G L F S + + R R
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL-----FFHLSRERVFTEERARFYGAEIV 115
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
ALEYLH VV+R+ K N++LD + + ++D GL
Sbjct: 116 SALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLC 152
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 11/160 (6%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MS 463
+ N F L+G+G+ G+V E A G+ A+K + + ++E S +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRV-ALGTA 522
RHP + L H + V EY G L F S + + R R
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL-----FFHLSRERVFTEERARFYGAEIV 115
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
ALEYLH VV+R+ K N++LD + + ++D GL
Sbjct: 116 SALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLC 152
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 24/174 (13%)
Query: 412 FSQEFLIGEGSLGRVYRA-EFANGKIMAVKKID-----NAALSLQEEDNFLEAVSNMSRL 465
F++ IG+GS G V++ + K++A+K ID + +Q+E ++ +S+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE------ITVLSQC 62
Query: 466 RHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD-DSSKNLTWNARVRVALGTARA 524
P + G + + ++ EY+G G+ D+L D ++ T + +
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIAT------ILREILKG 116
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE--RQVITGT 576
L+YLH +HR+ K+AN+LL + L+D G+A +T+ R GT
Sbjct: 117 LDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGT 167
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLA 474
++GEGS V A E A + A+K ++ + + + ++ + MSRL HP V L
Sbjct: 40 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 99
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT--WNARVRVALGTARALEYLHEVC 532
+ + Y NG L + + T + A + ALEYLH
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEYLHG-- 151
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNTER 570
++HR+ K NILL+++++ ++D G A L+P +++
Sbjct: 152 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 189
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLA 474
++GEGS V A E A + A+K ++ + + + ++ + MSRL HP V L
Sbjct: 42 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 101
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT--WNARVRVALGTARALEYLHEVC 532
+ + Y NG L + + T + A + ALEYLH
Sbjct: 102 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEYLHG-- 153
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNTER 570
++HR+ K NILL+++++ ++D G A L+P +++
Sbjct: 154 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 191
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLA 474
++GEGS V A E A + A+K ++ + + + ++ + MSRL HP V L
Sbjct: 14 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 73
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT--WNARVRVALGTARALEYLHEVC 532
+ + Y NG L + + T + A + ALEYLH
Sbjct: 74 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEYLHG-- 125
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNTER 570
++HR+ K NILL+++++ ++D G A L+P +++
Sbjct: 126 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 163
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLA 474
++GEGS V A E A + A+K ++ + + + ++ + MSRL HP V L
Sbjct: 17 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 76
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT--WNARVRVALGTARALEYLHEVC 532
+ + Y NG L + + T + A + ALEYLH
Sbjct: 77 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEYLHG-- 128
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNTER 570
++HR+ K NILL+++++ ++D G A L+P +++
Sbjct: 129 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 166
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 20/155 (12%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G+ V AE A GK+ AVK I AL +E + ++ + +++H NIV L
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPKKALK-GKESSIENEIAVLRKIKHENIVALEDI 88
Query: 477 CAEHGQRLLVYEYVGNGNLHDML----HFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
LV + V G L D + + + + L +R L A+ YLH +
Sbjct: 89 YESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTL-----IRQVLD---AVYYLHRM- 139
Query: 533 LPSVVHRNFKSANILL---DDELNPHLSDCGLAAL 564
+VHR+ K N+L D+E +SD GL+ +
Sbjct: 140 --GIVHRDLKPENLLYYSQDEESKIMISDFGLSKM 172
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 24/174 (13%)
Query: 412 FSQEFLIGEGSLGRVYRA-EFANGKIMAVKKID-----NAALSLQEEDNFLEAVSNMSRL 465
F++ IG+GS G V++ + K++A+K ID + +Q+E ++ +S+
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE------ITVLSQC 77
Query: 466 RHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD-DSSKNLTWNARVRVALGTARA 524
P + G + + ++ EY+G G+ D+L D ++ T + +
Sbjct: 78 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIAT------ILREILKG 131
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE--RQVITGT 576
L+YLH +HR+ K+AN+LL + L+D G+A +T+ R GT
Sbjct: 132 LDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGT 182
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 85/215 (39%), Gaps = 23/215 (10%)
Query: 372 PPAEKLVIERVAKSGSLKKIKSPITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEF 431
P E L + SG +++ K + AS F +IG GS +V
Sbjct: 15 PTTENLYFQGAMGSG-IEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRL 73
Query: 432 AN-GKIMAVKKIDNAALS-------LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483
+I A++ + ++ +Q E + E SN HP +V L +
Sbjct: 74 KKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN-----HPFLVGLHSCFQTESRL 128
Query: 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKS 543
V EYV G+L M H K +AR A + AL YLHE +++R+ K
Sbjct: 129 FFVIEYVNGGDL--MFHMQR-QRKLPEEHARFYSA-EISLALNYLHER---GIIYRDLKL 181
Query: 544 ANILLDDELNPHLSDCGLA--ALTPNTERQVITGT 576
N+LLD E + L+D G+ L P GT
Sbjct: 182 DNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGT 216
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLA 474
++GEGS V A E A + A+K ++ + + + ++ + MSRL HP V L
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT--WNARVRVALGTARALEYLHEVC 532
+ + Y NG L + + T + A + ALEYLH
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEYLHG-- 148
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNTER 570
++HR+ K NILL+++++ ++D G A L+P +++
Sbjct: 149 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 186
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLA 474
++GEGS V A E A + A+K ++ + + + ++ + MSRL HP V L
Sbjct: 40 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 99
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT--WNARVRVALGTARALEYLHEVC 532
+ + Y NG L + + T + A + ALEYLH
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEYLHG-- 151
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNTER 570
++HR+ K NILL+++++ ++D G A L+P +++
Sbjct: 152 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 189
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLA 474
++GEGS V A E A + A+K ++ + + + ++ + MSRL HP V L
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT--WNARVRVALGTARALEYLHEVC 532
+ + Y NG L + + T + A + ALEYLH
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEYLHG-- 148
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNTER 570
++HR+ K NILL+++++ ++D G A L+P +++
Sbjct: 149 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 186
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLA 474
++GEGS V A E A + A+K ++ + + + ++ + MSRL HP V L
Sbjct: 16 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 75
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT--WNARVRVALGTARALEYLHEVC 532
+ + Y NG L + + T + A + ALEYLH
Sbjct: 76 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEYLHG-- 127
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNTER 570
++HR+ K NILL+++++ ++D G A L+P +++
Sbjct: 128 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 165
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLA 474
++GEGS V A E A + A+K ++ + + + ++ + MSRL HP V L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT--WNARVRVALGTARALEYLHEVC 532
+ + Y NG L + + T + A + ALEYLH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEYLHG-- 150
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNTER 570
++HR+ K NILL+++++ ++D G A L+P +++
Sbjct: 151 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLA 474
++GEGS V A E A + A+K ++ + + + ++ + MSRL HP V L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT--WNARVRVALGTARALEYLHEVC 532
+ + Y NG L + + T + A + ALEYLH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEYLHG-- 150
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNTER 570
++HR+ K NILL+++++ ++D G A L+P +++
Sbjct: 151 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLA 474
++GEGS V A E A + A+K ++ + + + ++ + MSRL HP V L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT--WNARVRVALGTARALEYLHEVC 532
+ + Y NG L + + T + A + ALEYLH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEYLHG-- 150
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNTER 570
++HR+ K NILL+++++ ++D G A L+P +++
Sbjct: 151 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLA 474
++GEGS V A E A + A+K ++ + + + ++ + MSRL HP V L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT--WNARVRVALGTARALEYLHEVC 532
+ + Y NG L + + T + A + ALEYLH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEYLHG-- 150
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNTER 570
++HR+ K NILL+++++ ++D G A L+P +++
Sbjct: 151 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLA 474
++GEGS V A E A + A+K ++ + + + ++ + MSRL HP V L
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT--WNARVRVALGTARALEYLHEVC 532
+ + Y NG L + + T + A + ALEYLH
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEYLHG-- 148
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNTER 570
++HR+ K NILL+++++ ++D G A L+P +++
Sbjct: 149 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 186
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 16/142 (11%)
Query: 418 IGEGSLGRVY---RAEFAN-GKI----MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
+G+G+ +++ R E + G++ + +K +D A + E +F EA S MS+L H +
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSE--SFFEAASMMSKLSHKH 73
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH 529
+V G C + +LV E+V G+L L + + N+ W ++ VA A A+ +L
Sbjct: 74 LVLNYGVCFCGDENILVQEFVKFGSLDTYLK-KNKNCINILW--KLEVAKQLAWAMHFLE 130
Query: 530 EVCLPSVVHRNFKSANILLDDE 551
E L +H N + NILL E
Sbjct: 131 ENTL---IHGNVCAKNILLIRE 149
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLA 474
++GEGS V A E A + A+K ++ + + + ++ + MSRL HP V L
Sbjct: 15 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 74
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT--WNARVRVALGTARALEYLHEVC 532
+ + Y NG L + + T + A + ALEYLH
Sbjct: 75 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEYLHG-- 126
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNTER 570
++HR+ K NILL+++++ ++D G A L+P +++
Sbjct: 127 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 164
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 21/159 (13%)
Query: 418 IGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
+G+G+ G V + G ++AVK++ ++ Q +F + + L IV
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR--DFQREIQILKALHSDFIVK 72
Query: 473 LAG--YCAEHGQRLLVYEYVGNGNLHDML--HFAD-DSSKNLTWNARVRVALGTARALEY 527
G Y + LV EY+ +G L D L H A D+S+ L +++++ + +EY
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEY 126
Query: 528 LHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566
L VHR+ + NIL++ E + ++D GLA L P
Sbjct: 127 LGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 162
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 11/160 (6%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MS 463
+ N F L+G+G+ G+V E A G+ A+K + + ++E S +
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 65
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRV-ALGTA 522
RHP + L H + V EY G L F S + + R R
Sbjct: 66 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL-----FFHLSRERVFTEERARFYGAEIV 120
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
ALEYLH VV+R+ K N++LD + + ++D GL
Sbjct: 121 SALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLC 157
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLA 474
++GEGS V A E A + A+K ++ + + + ++ + MSRL HP V L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT--WNARVRVALGTARALEYLHEVC 532
+ + Y NG L + + T + A + ALEYLH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEYLHG-- 150
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNTER 570
++HR+ K NILL+++++ ++D G A L+P +++
Sbjct: 151 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 11/160 (6%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MS 463
+ N F L+G+G+ G+V E A G+ A+K + + ++E S +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRV-ALGTA 522
RHP + L H + V EY G L F S + + R R
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL-----FFHLSRERVFTEERARFYGAEIV 115
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
ALEYLH VV+R+ K N++LD + + ++D GL
Sbjct: 116 SALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLC 152
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLA 474
++GEGS V A E A + A+K ++ + + + ++ + MSRL HP V L
Sbjct: 21 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 80
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT--WNARVRVALGTARALEYLHEVC 532
+ + Y NG L + + T + A + ALEYLH
Sbjct: 81 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEYLHG-- 132
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNTER 570
++HR+ K NILL+++++ ++D G A L+P +++
Sbjct: 133 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 170
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 9/159 (5%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMS 463
+ + S E +G G G V+ A + +AVK + ++S++ FL + M
Sbjct: 176 AWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE---AFLAEANVMK 232
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR 523
L+H +V L + ++ E++ G+L D L + S + L + + A
Sbjct: 233 TLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAE 289
Query: 524 ALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ ++ + + +HR+ ++ANIL+ L ++D GLA
Sbjct: 290 GMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLA 325
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLA 474
++GEGS V A E A + A+K ++ + + + ++ + MSRL HP V L
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 95
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT--WNARVRVALGTARALEYLHEVC 532
+ + Y NG L + + T + A + ALEYLH
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEYLHG-- 147
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNTER 570
++HR+ K NILL+++++ ++D G A L+P +++
Sbjct: 148 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 185
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 16/167 (9%)
Query: 405 LQTATNSFSQEF----LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQ-EEDNFLEA 458
+Q +T FS + ++G+GS G V + G+ AVK I + + ++++ L
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 459 VSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVA 518
V + +L HPNI L + + G LV E G L D + S K + R+
Sbjct: 77 VQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSEVDAARII 132
Query: 519 LGTARALEYLHEVCLPSVVHRNFKSANILLD---DELNPHLSDCGLA 562
+ Y H+ +VHR+ K N+LL+ + N + D GL+
Sbjct: 133 RQVLSGITYXHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLA 474
++GEGS V A E A + A+K ++ + + + ++ + MSRL HP V L
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 95
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT--WNARVRVALGTARALEYLHEVC 532
+ + Y NG L + + T + A + ALEYLH
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEYLHG-- 147
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNTER 570
++HR+ K NILL+++++ ++D G A L+P +++
Sbjct: 148 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 185
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 21/159 (13%)
Query: 418 IGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
+G+G+ G V + G ++AVK++ ++ Q +F + + L IV
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR--DFQREIQILKALHSDFIVK 76
Query: 473 LAGYCAEHGQR--LLVYEYVGNGNLHDML--HFAD-DSSKNLTWNARVRVALGTARALEY 527
G G++ LV EY+ +G L D L H A D+S+ L +++++ + +EY
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEY 130
Query: 528 LHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566
L VHR+ + NIL++ E + ++D GLA L P
Sbjct: 131 LGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 166
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 21/159 (13%)
Query: 418 IGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
+G+G+ G V + G ++AVK++ ++ Q +F + + L IV
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR--DFQREIQILKALHSDFIVK 75
Query: 473 LAGYCAEHGQR--LLVYEYVGNGNLHDML--HFAD-DSSKNLTWNARVRVALGTARALEY 527
G G++ LV EY+ +G L D L H A D+S+ L +++++ + +EY
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEY 129
Query: 528 LHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566
L VHR+ + NIL++ E + ++D GLA L P
Sbjct: 130 LGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 165
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 21/159 (13%)
Query: 418 IGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
+G+G+ G V + G ++AVK++ ++ Q +F + + L IV
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR--DFQREIQILKALHSDFIVK 88
Query: 473 LAGYCAEHGQR--LLVYEYVGNGNLHDML--HFAD-DSSKNLTWNARVRVALGTARALEY 527
G G++ LV EY+ +G L D L H A D+S+ L +++++ + +EY
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEY 142
Query: 528 LHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566
L VHR+ + NIL++ E + ++D GLA L P
Sbjct: 143 LGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 178
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 13/150 (8%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAG 475
+G+G+ V R + G+ A K I+ LS ++ LE + + RL +HPNIV L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQK-LEREARICRLLKHPNIVRLHD 70
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
+E G LV++ V G L F D ++ + + + + LE ++ L
Sbjct: 71 SISEEGFHYLVFDLVTGGEL-----FEDIVARE--YYSEADASHCIQQILESVNHCHLNG 123
Query: 536 VVHRNFKSANILLDDELN---PHLSDCGLA 562
+VHR+ K N+LL + L+D GLA
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLA 474
++GEGS V A E A + A+K ++ + + + ++ + MSRL HP V L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT--WNARVRVALGTARALEYLHEVC 532
+ + Y NG L + + T + A + ALEYLH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEI------VSALEYLHG-- 150
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNTER 570
++HR+ K NILL+++++ ++D G A L+P +++
Sbjct: 151 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 13/157 (8%)
Query: 411 SFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHP 468
+F E IG G VYRA +G +A+KK+ L + + ++ + + +L HP
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 469 NIVTLAGYCAEHGQRLLVYEYVGNGNLHDML-HFADDSS---KNLTWNARVRVALGTARA 524
N++ E + +V E G+L M+ HF + W V++ A
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL----CSA 148
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561
LE++H V+HR+ K AN+ + L D GL
Sbjct: 149 LEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGL 182
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 19/161 (11%)
Query: 412 FSQEFLI----GEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL- 465
F++E+ + G+G+ V R + G+ A I+ LS ++ LE + + RL
Sbjct: 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQK-LEREARICRLL 67
Query: 466 RHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA-RA 524
+HPNIV L +E G L+++ V G L F D ++ A + A
Sbjct: 68 KHPNIVRLHDSISEEGHHYLIFDLVTGGEL-----FEDIVAREYYSEADASHCIQQILEA 122
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELN---PHLSDCGLA 562
+ + H++ VVHRN K N+LL +L L+D GLA
Sbjct: 123 VLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLA 160
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 15/151 (9%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAG 475
+G+G+ V R + G+ A K I+ LS ++ LE + + RL +HPNIV L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQK-LEREARICRLLKHPNIVRLHD 88
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA-RALEYLHEVCLP 534
+E G L+++ V G L F D ++ A + A+ + H++
Sbjct: 89 SISEEGHHYLIFDLVTGGEL-----FEDIVAREYYSEADASHCIQQILEAVLHCHQM--- 140
Query: 535 SVVHRNFKSANILLDDELN---PHLSDCGLA 562
VVHR+ K N+LL +L L+D GLA
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLA 171
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 13/150 (8%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAG 475
+G+G+ V R + G+ A K I+ LS ++ LE + + RL +HPNIV L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQK-LEREARICRLLKHPNIVRLHD 70
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
+E G LV++ V G L F D ++ + + + + LE ++ L
Sbjct: 71 SISEEGFHYLVFDLVTGGEL-----FEDIVARE--YYSEADASHCIQQILESVNHCHLNG 123
Query: 536 VVHRNFKSANILLDDELN---PHLSDCGLA 562
+VHR+ K N+LL + L+D GLA
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 19/149 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
S++ +IG GS G VY+A+ + G+++A+KK+ LQ + + M +L H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQGKAFKNRELQIMRKLDHCN 74
Query: 470 IVTLAGYCAEHGQRL------LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA- 522
IV L + G++ LV +YV H++ +K V++ +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS--RAKQTLPVIYVKLYMYQLF 132
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDE 551
R+L Y+H + HR+ K N+LLD +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPD 158
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 24/158 (15%)
Query: 418 IGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIVT 472
IG+G+ G V++A G+ +A+KK+ L E++ F L + + L+H N+V
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV----LMENEKEGFPITALREIKILQLLKHENVVN 81
Query: 473 LAGYCAEH--------GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARA 524
L C G LV+++ HD+ + T + RV
Sbjct: 82 LIEICRTKASPYNRCKGSIYLVFDFCE----HDLAGLLSNVLVKFTLSEIKRVMQMLLNG 137
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
L Y+H ++HR+ K+AN+L+ + L+D GLA
Sbjct: 138 LYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 19/149 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
S++ +IG GS G VY+A+ + G+++A+KK+ LQ + + M +L H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQGKAFKNRELQIMRKLDHCN 74
Query: 470 IVTLAGYCAEHGQRL------LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA- 522
IV L + G++ LV +YV H++ +K V++ +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS--RAKQTLPVIYVKLYMYQLF 132
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDE 551
R+L Y+H + HR+ K N+LLD +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPD 158
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 29/167 (17%)
Query: 412 FSQEFL-----IGEGSLGRV----YRAEFAN-GKIMAVKKID-----NAALSLQEEDNFL 456
F + FL +GEG G+V Y E N G+ +AVK + N L++E +
Sbjct: 18 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKE---I 74
Query: 457 EAVSNMSRLRHPNIVTLAGYCAEHGQR--LLVYEYVGNGNLHDMLHFADDSSKNLTWNAR 514
E + N L H NIV G C E G L+ E++ +G+L + L + + +
Sbjct: 75 EILRN---LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQ 128
Query: 515 VRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561
++ A+ + ++YL VHR+ + N+L++ E + D GL
Sbjct: 129 LKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGL 172
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 24/158 (15%)
Query: 418 IGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIVT 472
IG+G+ G V++A G+ +A+KK+ L E++ F L + + L+H N+V
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV----LMENEKEGFPITALREIKILQLLKHENVVN 81
Query: 473 LAGYCAEH--------GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARA 524
L C G LV+++ HD+ + T + RV
Sbjct: 82 LIEICRTKASPYNRCKGSIYLVFDFCE----HDLAGLLSNVLVKFTLSEIKRVMQMLLNG 137
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
L Y+H ++HR+ K+AN+L+ + L+D GLA
Sbjct: 138 LYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 29/169 (17%)
Query: 412 FSQEFL-----IGEGSLGRV----YRAEFAN-GKIMAVKKID-----NAALSLQEEDNFL 456
F + FL +GEG G+V Y E N G+ +AVK + N L++E +
Sbjct: 6 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKE---I 62
Query: 457 EAVSNMSRLRHPNIVTLAGYCAEHGQR--LLVYEYVGNGNLHDMLHFADDSSKNLTWNAR 514
E + N L H NIV G C E G L+ E++ +G+L + L + + +
Sbjct: 63 EILRN---LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQ 116
Query: 515 VRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563
++ A+ + ++YL VHR+ + N+L++ E + D GL
Sbjct: 117 LKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 162
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 10/163 (6%)
Query: 403 ASLQTATNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEE-DNFLEAVS 460
A + N F L+G+G+ G+V E A G+ A+K + + ++E + L
Sbjct: 2 AMARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 61
Query: 461 NMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRV-AL 519
+ RHP + L H + V EY G L F S + + R R
Sbjct: 62 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL-----FFHLSRERVFSEDRARFYGA 116
Query: 520 GTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
AL+YLH +VV+R+ K N++LD + + ++D GL
Sbjct: 117 EIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLC 157
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 15/172 (8%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALS----LQEEDNFLEAVSNMSRL-RHPNIV 471
+G G+ G+V A F GK AV K+ L E++ + + MS L +H NIV
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLH------FADDSSKNLTWNARVRVALGTARAL 525
L G C G L++ EY G+L + L + + L + + A+ +
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGTS 577
+L + +HR+ + N+LL + + D GLA N ++ G +
Sbjct: 166 AFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 214
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 24/158 (15%)
Query: 418 IGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIVT 472
IG+G+ G V++A G+ +A+KK+ L E++ F L + + L+H N+V
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKV----LMENEKEGFPITALREIKILQLLKHENVVN 80
Query: 473 LAGYCAEH--------GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARA 524
L C G LV+++ HD+ + T + RV
Sbjct: 81 LIEICRTKASPYNRCKGSIYLVFDFCE----HDLAGLLSNVLVKFTLSEIKRVMQMLLNG 136
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
L Y+H ++HR+ K+AN+L+ + L+D GLA
Sbjct: 137 LYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLA 171
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 16/166 (9%)
Query: 405 LQTATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEED----NFLEAV 459
+ N FS +IG G G VY A+ GK+ A+K +D + +++ + N +
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 460 SNMSRLRHPNIVTLAGYCAEHGQRL-LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRV- 517
S +S P IV ++ Y +L + + + G+LH L S + A +R
Sbjct: 244 SLVSTGDCPFIVCMS-YAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFY 297
Query: 518 ALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563
A LE++H VV+R+ K ANILLD+ + +SD GLA
Sbjct: 298 AAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC 340
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 16/166 (9%)
Query: 405 LQTATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEED----NFLEAV 459
+ N FS +IG G G VY A+ GK+ A+K +D + +++ + N +
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 460 SNMSRLRHPNIVTLAGYCAEHGQRL-LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRV- 517
S +S P IV ++ Y +L + + + G+LH L S + A +R
Sbjct: 244 SLVSTGDCPFIVCMS-YAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFY 297
Query: 518 ALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563
A LE++H VV+R+ K ANILLD+ + +SD GLA
Sbjct: 298 AAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC 340
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 16/166 (9%)
Query: 405 LQTATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEED----NFLEAV 459
+ N FS +IG G G VY A+ GK+ A+K +D + +++ + N +
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 460 SNMSRLRHPNIVTLAGYCAEHGQRL-LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRV- 517
S +S P IV ++ Y +L + + + G+LH L S + A +R
Sbjct: 244 SLVSTGDCPFIVCMS-YAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFY 297
Query: 518 ALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563
A LE++H VV+R+ K ANILLD+ + +SD GLA
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLAC 340
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 71/170 (41%), Gaps = 22/170 (12%)
Query: 417 LIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALS-------LQEEDNFLEAVSNMSRLRHP 468
+IG GS +V +I A+K + ++ +Q E + E SN HP
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN-----HP 66
Query: 469 NIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+V L + V EYV G+L M H K +AR A + AL YL
Sbjct: 67 FLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQR-QRKLPEEHARFYSA-EISLALNYL 122
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA--ALTPNTERQVITGT 576
HE +++R+ K N+LLD E + L+D G+ L P GT
Sbjct: 123 HER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGT 169
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 16/166 (9%)
Query: 405 LQTATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEED----NFLEAV 459
+ N FS +IG G G VY A+ GK+ A+K +D + +++ + N +
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 460 SNMSRLRHPNIVTLAGYCAEHGQRL-LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRV- 517
S +S P IV ++ Y +L + + + G+LH L S + A +R
Sbjct: 243 SLVSTGDCPFIVCMS-YAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFY 296
Query: 518 ALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563
A LE++H VV+R+ K ANILLD+ + +SD GLA
Sbjct: 297 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLAC 339
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 71/170 (41%), Gaps = 22/170 (12%)
Query: 417 LIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALS-------LQEEDNFLEAVSNMSRLRHP 468
+IG GS +V +I A+K + ++ +Q E + E SN HP
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN-----HP 81
Query: 469 NIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+V L + V EYV G+L M H K +AR A + AL YL
Sbjct: 82 FLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQR-QRKLPEEHARFYSA-EISLALNYL 137
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA--ALTPNTERQVITGT 576
HE +++R+ K N+LLD E + L+D G+ L P GT
Sbjct: 138 HER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGT 184
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 26/159 (16%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEA-VSNMSRLRHPNIVTLAGY 476
IG+G G V+ ++ G+ +AVK + +E F E + +RH NI+ G+
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVK----VFFTTEEASWFRETEIYQTVLMRHENIL---GF 96
Query: 477 CA-------EHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH 529
A Q L+ +Y NG+L+D L S L + +++A + L +LH
Sbjct: 97 IAADIKGTGSWTQLYLITDYHENGSLYDYL-----KSTTLDAKSMLKLAYSSVSGLCHLH 151
Query: 530 EVCL-----PSVVHRNFKSANILLDDELNPHLSDCGLAA 563
P++ HR+ KS NIL+ ++D GLA
Sbjct: 152 TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 190
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 69/170 (40%), Gaps = 22/170 (12%)
Query: 417 LIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALS-------LQEEDNFLEAVSNMSRLRHP 468
+IG GS +V +I A+K + ++ +Q E + E SN HP
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN-----HP 70
Query: 469 NIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+V L + V EYV G+L M H + L + + AL YL
Sbjct: 71 FLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQ--RQRKLPEEHARFYSAEISLALNYL 126
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA--ALTPNTERQVITGT 576
HE +++R+ K N+LLD E + L+D G+ L P GT
Sbjct: 127 HER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGT 173
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 10/160 (6%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEE-DNFLEAVSNMS 463
+ N F L+G+G+ G+V E A G+ A+K + + ++E + L +
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRV-ALGTA 522
RHP + L H + V EY G L F S + + R R
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVMEYANGGEL-----FFHLSRERVFSEDRARFYGAEIV 118
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
AL+YLH +VV+R+ K N++LD + + ++D GL
Sbjct: 119 SALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLC 156
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 14/159 (8%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLA 474
++GEGS A E A + A+K ++ + + + ++ + MSRL HP V L
Sbjct: 37 ILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT--WNARVRVALGTARALEYLHEVC 532
+ + Y NG L + + T + A + ALEYLH
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEYLHG-- 148
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNTER 570
++HR+ K NILL+++++ ++D G A L+P +++
Sbjct: 149 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 186
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 10/160 (6%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEE-DNFLEAVSNMS 463
+ N F L+G+G+ G+V E A G+ A+K + + ++E + L +
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 464 RLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRV-ALGTA 522
RHP + L H + V EY G L F S + + R R
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVMEYANGGEL-----FFHLSRERVFSEDRARFYGAEIV 120
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
AL+YLH +VV+R+ K N++LD + + ++D GL
Sbjct: 121 SALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLC 158
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 19/149 (12%)
Query: 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
S++ +IG GS G VY+A+ + G+++A+KK+ LQ + + M +L H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQGKAFKNRELQIMRKLDHCN 74
Query: 470 IVTLAGYCAEHGQRL------LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA- 522
IV L + G++ LV +YV H++ +K V++ +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYS--RAKQTLPVIYVKLYMYQLF 132
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDE 551
R+L Y+H + HR+ K N+LLD +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPD 158
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 13/151 (8%)
Query: 418 IGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IG G+ G V A G+ +A+KKI NA + L + + +H NI+ +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 477 ---CAEHGQRLLVYEYVG--NGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV 531
+G+ VY + +LH ++H SS+ LT R L+Y+H
Sbjct: 123 LRPTVPYGEFKSVYVVLDLMESDLHQIIH----SSQPLTLEHVRYFLYQLLRGLKYMHSA 178
Query: 532 CLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
V+HR+ K +N+L+++ + D G+A
Sbjct: 179 ---QVIHRDLKPSNLLVNENCELKIGDFGMA 206
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 72/177 (40%), Gaps = 18/177 (10%)
Query: 387 SLKKIKSPITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAA 446
SL K K +T + L +F + L+ E + GR Y + +++ K D A
Sbjct: 137 SLAKPKHRVTMNEFEYLKL-LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK--DEVA 193
Query: 447 LSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSS 506
+L E + RHP + L H + V EY G L F S
Sbjct: 194 HTLTEN-------RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL-----FFHLSR 241
Query: 507 KNLTWNARVRV-ALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ + R R AL+YLH +VV+R+ K N++LD + + ++D GL
Sbjct: 242 ERVFSEDRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLC 296
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 72/177 (40%), Gaps = 18/177 (10%)
Query: 387 SLKKIKSPITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAA 446
SL K K +T + L +F + L+ E + GR Y + +++ K D A
Sbjct: 140 SLAKPKHRVTMNEFEYLKL-LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK--DEVA 196
Query: 447 LSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSS 506
+L E + RHP + L H + V EY G L F S
Sbjct: 197 HTLTEN-------RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL-----FFHLSR 244
Query: 507 KNLTWNARVRV-ALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ + R R AL+YLH +VV+R+ K N++LD + + ++D GL
Sbjct: 245 ERVFSEDRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLC 299
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 15/172 (8%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALS----LQEEDNFLEAVSNMSRL-RHPNIV 471
+G G+ G+V A F GK AV K+ L E++ + + MS L +H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLH------FADDSSKNLTWNARVRVALGTARAL 525
L G C G L++ EY G+L + L + + L + + A+ +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGTS 577
+L + +HR+ + N+LL + + D GLA N ++ G +
Sbjct: 174 AFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 222
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 27/172 (15%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVK--KIDNAALSLQEEDNFLEAVSNMSR 464
AT+ + IG G+ G VY+A + G +A+K ++ N EE + V ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNG-----EEGLPISTVREVAL 56
Query: 465 LR------HPNIVTLAGYCA-----EHGQRLLVYEYVGNGNLHDMLHFADDSSK-NLTWN 512
LR HPN+V L CA + LV+E+V D+ + D + L
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ----DLRTYLDKAPPPGLPAE 112
Query: 513 ARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
+ R L++LH C +VHR+ K NIL+ L+D GLA +
Sbjct: 113 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 75/179 (41%), Gaps = 27/179 (15%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR 466
AT+ + IG G+ G VY+A + G +A+K + + V ++ LR
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 467 ------HPNIVTLAGYCA-----EHGQRLLVYEYVGNGNLHDMLHFADDSSK-NLTWNAR 514
HPN+V L CA + LV+E+V D+ + D + L
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ----DLRTYLDKAPPPGLPAETI 122
Query: 515 VRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA-------ALTP 566
+ R L++LH C +VHR+ K NIL+ L+D GLA ALTP
Sbjct: 123 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTP 178
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 36/165 (21%)
Query: 417 LIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFL--EAVSNMSRLRHPNI---- 470
LIG G G VY+ + + +AVK S NF+ + + + + H NI
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVK-----VFSFANRQNFINEKNIYRVPLMEHDNIARFI 73
Query: 471 -----VTLAGYCAEHGQRLLVYEYVGNGNLHDML--HFADDSSKNLTWNARVRVALGTAR 523
VT G + LLV EY NG+L L H +D W + R+A R
Sbjct: 74 VGDERVTADG----RMEYLLVMEYYPNGSLXKYLSLHTSD-------WVSSCRLAHSVTR 122
Query: 524 ALEYLH------EVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
L YLH + P++ HR+ S N+L+ ++ +SD GL+
Sbjct: 123 GLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 27/172 (15%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVK--KIDNAALSLQEEDNFLEAVSNMSR 464
AT+ + IG G+ G VY+A + G +A+K ++ N EE + V ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNG-----EEGLPISTVREVAL 56
Query: 465 LR------HPNIVTLAGYCA-----EHGQRLLVYEYVGNGNLHDMLHFADDSSK-NLTWN 512
LR HPN+V L CA + LV+E+V D+ + D + L
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ----DLRTYLDKAPPPGLPAE 112
Query: 513 ARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
+ R L++LH C +VHR+ K NIL+ L+D GLA +
Sbjct: 113 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 27/172 (15%)
Query: 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVK--KIDNAALSLQEEDNFLEAVSNMSR 464
AT+ + IG G+ G VY+A + G +A+K ++ N EE + V ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNG-----EEGLPISTVREVAL 56
Query: 465 LR------HPNIVTLAGYCA-----EHGQRLLVYEYVGNGNLHDMLHFADDSSK-NLTWN 512
LR HPN+V L CA + LV+E+V D+ + D + L
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ----DLRTYLDKAPPPGLPAE 112
Query: 513 ARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
+ R L++LH C +VHR+ K NIL+ L+D GLA +
Sbjct: 113 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 13/151 (8%)
Query: 418 IGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IG G+ G V A G+ +A+KKI NA + L + + +H NI+ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 477 ---CAEHGQRLLVYEYVG--NGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV 531
+G+ VY + +LH ++H SS+ LT R L+Y+H
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMESDLHQIIH----SSQPLTLEHVRYFLYQLLRGLKYMHSA 177
Query: 532 CLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
V+HR+ K +N+L+++ + D G+A
Sbjct: 178 ---QVIHRDLKPSNLLVNENCELKIGDFGMA 205
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 78/187 (41%), Gaps = 30/187 (16%)
Query: 417 LIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-------HPN 469
++G G+ G+V A A G I A L+E+ + E + MS L+ H N
Sbjct: 52 VLGSGAFGKVMNAT-AYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDMLH-----FADDSSKN--------------LT 510
IV L G C G L++EY G+L + L F++D + LT
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570
+ + A A+ +E+L S VHR+ + N+L+ + D GLA +
Sbjct: 171 FEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN 227
Query: 571 QVITGTS 577
V+ G +
Sbjct: 228 YVVRGNA 234
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 21/150 (14%)
Query: 418 IGEGSLG--RVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG 475
IG G+ G R+ R + +++AVK I+ A ++N + N LRHPNIV
Sbjct: 28 IGSGNFGVARLMRDKLTK-ELVAVKYIERGAAI---DENVQREIINHRSLRHPNIVRFKE 83
Query: 476 YCAEHGQRLLVYEYVGNGNLHDML----HFADDSSKNLTWNARVRVALGTARALEYLHEV 531
++ EY G L++ + F++D ++ + Y H +
Sbjct: 84 VILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQ--------LLSGVSYCHSM 135
Query: 532 CLPSVVHRNFKSANILLDDELNPHLSDCGL 561
+ HR+ K N LLD P L C
Sbjct: 136 ---QICHRDLKLENTLLDGSPAPRLKICDF 162
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+GEG+ G V A + +AVK +D ++ +N + + L H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
E + L EY G L D + + + R + YLH + +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GI 126
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ K N+LLD+ N +SD GLA +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+GEG+ G V A + +AVK +D ++ +N + + L H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
E + L EY G L D + + + R + YLH + +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GI 125
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ K N+LLD+ N +SD GLA +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 82/174 (47%), Gaps = 24/174 (13%)
Query: 412 FSQEFLIGEGSLGRVYRA-EFANGKIMAVKKID-----NAALSLQEEDNFLEAVSNMSRL 465
F++ IG+GS G V++ + +++A+K ID + +Q+E ++ +S+
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQE------ITVLSQC 78
Query: 466 RHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD-DSSKNLTWNARVRVALGTARA 524
+ G + + ++ EY+G G+ D+L D + T + +
Sbjct: 79 DSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEI------LKG 132
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE--RQVITGT 576
L+YLH +HR+ K+AN+LL ++ + L+D G+A +T+ R GT
Sbjct: 133 LDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGT 183
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 71/162 (43%), Gaps = 13/162 (8%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IGEGS G V A E +G+ +AVK +D Q + V M +H N+V +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMD--LRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
+ ++ E++ G L D++ S L V +AL YLH V
Sbjct: 111 YLVGEELWVLMEFLQGGALTDIV-----SQVRLNEEQIATVCEAVLQALAYLHA---QGV 162
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAALTPN--TERQVITGT 576
+HR+ KS +ILL + LSD G A +R+ + GT
Sbjct: 163 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGT 204
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 8/156 (5%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+G G+ G V+ E + + V K N S + + + L HPNI+ +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV 537
++ +V E G L + + A K L+ + AL Y H VV
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVV 146
Query: 538 HRNFKSANILLDDELNPH----LSDCGLAALTPNTE 569
H++ K NIL D +PH + D GLA L + E
Sbjct: 147 HKDLKPENILFQD-TSPHSPIKIIDFGLAELFKSDE 181
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+GEG+ G V A + +AVK +D ++ +N + + L H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
E + L EY G L D + + + R + YLH + +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GI 126
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ K N+LLD+ N +SD GLA +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+GEG+ G V A + +AVK +D ++ +N + + L H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
E + L EY G L D + + + R + YLH + +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GI 126
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ K N+LLD+ N +SD GLA +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+GEG+ G V A + +AVK +D ++ +N + + L H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
E + L EY G L D + + + R + YLH + +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GI 126
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ K N+LLD+ N +SD GLA +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 80/164 (48%), Gaps = 20/164 (12%)
Query: 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKI---DNAALSLQEEDNFLEAVSNMSR 464
++ F + L+GEG+ G V A G+I+A+KKI D +L+ L + +
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT----LREIKILKH 65
Query: 465 LRHPNIVTLAGY----CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALG 520
+H NI+T+ E+ + + + + +LH ++ S++ L+ +
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-----STQMLSDDHIQYFIYQ 120
Query: 521 TARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
T RA++ LH +V+HR+ K +N+L++ + + D GLA +
Sbjct: 121 TLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARI 161
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 80/164 (48%), Gaps = 20/164 (12%)
Query: 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKI---DNAALSLQEEDNFLEAVSNMSR 464
++ F + L+GEG+ G V A G+I+A+KKI D +L+ L + +
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT----LREIKILKH 65
Query: 465 LRHPNIVTLAGY----CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALG 520
+H NI+T+ E+ + + + + +LH ++ S++ L+ +
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-----STQMLSDDHIQYFIYQ 120
Query: 521 TARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
T RA++ LH +V+HR+ K +N+L++ + + D GLA +
Sbjct: 121 TLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARI 161
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 417 LIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-----RHPNI 470
++G+GS G+V A G + AVK + + LQ++D +E R+ HP +
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVI-LQDDD--VECTMTEKRILSLARNHPFL 86
Query: 471 VTLAGYCAEHGQRLL-VYEYVGNGNLHDMLHFADDSSKNLTWNARVRV-ALGTARALEYL 528
L C + RL V E+V G+L M H S+ AR R A AL +L
Sbjct: 87 TQLFC-CFQTPDRLFFVMEFVNGGDL--MFHIQ--KSRRFD-EARARFYAAEIISALMFL 140
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
H+ +++R+ K N+LLD E + L+D G+
Sbjct: 141 HD---KGIIYRDLKLDNVLLDHEGHCKLADFGMC 171
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 24/158 (15%)
Query: 418 IGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIVT 472
IG+G+ G V++A G+ +A+KK+ L E++ F L + + L+H N+V
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV----LMENEKEGFPITALREIKILQLLKHENVVN 81
Query: 473 LAGYCAEHGQRL--------LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARA 524
L C LV+++ HD+ + T + RV
Sbjct: 82 LIEICRTKASPYNRCKASIYLVFDFCE----HDLAGLLSNVLVKFTLSEIKRVMQMLLNG 137
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
L Y+H ++HR+ K+AN+L+ + L+D GLA
Sbjct: 138 LYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 80/164 (48%), Gaps = 20/164 (12%)
Query: 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKI---DNAALSLQEEDNFLEAVSNMSR 464
++ F + L+GEG+ G V A G+I+A+KKI D +L+ L + +
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT----LREIKILKH 65
Query: 465 LRHPNIVTLAGY----CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALG 520
+H NI+T+ E+ + + + + +LH ++ S++ L+ +
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-----STQMLSDDHIQYFIYQ 120
Query: 521 TARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
T RA++ LH +V+HR+ K +N+L++ + + D GLA +
Sbjct: 121 TLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARI 161
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRAEFANG-KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHP 468
+++ + LIG GS G VY A N K +A+KK++ L + L ++ ++RL+
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 469 NIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNL-------TWNARVRVALGT 521
I+ L + LL ++ L+ +L AD K L T +
Sbjct: 88 YIIRLHDLII--PEDLLKFD-----ELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNL 140
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572
+++HE ++HR+ K AN LL+ + + + D GLA T N+++ +
Sbjct: 141 LLGEKFIHE---SGIIHRDLKPANCLLNQDCSVKICDFGLAR-TINSDKDI 187
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+GEG+ G V A + +AVK +D ++ +N + + + L H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEICINAMLNHENVVKFYGH 73
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
E + L EY G L D + + + R + YLH + +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GI 126
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ K N+LLD+ N +SD GLA +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+GEG+ G V A + +AVK +D ++ +N + + L H N+V G+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEICINKMLNHENVVKFYGH 71
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
E + L EY G L D + + + R + YLH + +
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GI 124
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ K N+LLD+ N +SD GLA +
Sbjct: 125 THRDIKPENLLLDERDNLKISDFGLATV 152
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+GEG+ G V A + +AVK +D ++ +N + + L H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
E + L EY G L D + + + R + YLH + +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GI 125
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ K N+LLD+ N +SD GLA +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+GEG+ G V A + +AVK +D ++ +N + + L H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
E + L EY G L D + + + R + YLH + +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GI 125
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ K N+LLD+ N +SD GLA +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+GEG+ G V A + +AVK +D ++ +N + + L H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
E + L EY G L D + + + R + YLH + +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GI 125
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ K N+LLD+ N +SD GLA +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 410 NSFSQEFLIGEGSLGRVYRAEFA--NGKIM--AVKKIDNAALSLQEEDNFLEAVSNMSRL 465
F+ ++G+G G V A+ +G + AVK + ++ + + FL + M
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 466 RHPNIVTLAGYCAEHGQR------LLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRV 517
HP++ L G + +++ ++ +G+LH L + ++ NL VR
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 518 ALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ A +EYL + +HR+ + N +L +++ ++D GL+
Sbjct: 143 MVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLS 184
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+GEG+ G V A + +AVK +D ++ +N + + L H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
E + L EY G L D + + + R + YLH + +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GI 126
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ K N+LLD+ N +SD GLA +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+GEG+ G V A + +AVK +D ++ +N + + L H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
E + L EY G L D + + + R + YLH + +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GI 125
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ K N+LLD+ N +SD GLA +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+GEG+ G V A + +AVK +D ++ +N + + L H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
E + L EY G L D + + + R + YLH + +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GI 125
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ K N+LLD+ N +SD GLA +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+GEG+ G V A + +AVK +D ++ +N + + L H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
E + L EY G L D + + + R + YLH + +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GI 126
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ K N+LLD+ N +SD GLA +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+GEG+ G V A + +AVK +D ++ +N + + L H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
E + L EY G L D + + + R + YLH + +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GI 125
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ K N+LLD+ N +SD GLA +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+GEG+ G V A + +AVK +D ++ +N + + L H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
E + L EY G L D + + + R + YLH + +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GI 125
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ K N+LLD+ N +SD GLA +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 62/151 (41%), Gaps = 21/151 (13%)
Query: 418 IGEGSLG--RVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG 475
IG G+ G R+ R + +N +++AVK I+ + ++N + N LRHPNIV
Sbjct: 27 IGSGNFGVARLMRDKQSN-ELVAVKYIERGE---KIDENVKREIINHRSLRHPNIVRFKE 82
Query: 476 YCAEHGQRLLVYEYVGNGNLHDML----HFADDSSKNLTWNARVRVALGTARALEYLHEV 531
+V EY G L + + F++D ++ + Y H +
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQ--------LISGVSYCHAM 134
Query: 532 CLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
V HR+ K N LLD P L C
Sbjct: 135 ---QVCHRDLKLENTLLDGSPAPRLKICAFG 162
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+GEG+ G V A + +AVK +D ++ +N + + L H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
E + L EY G L D + + + R + YLH + +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GI 125
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ K N+LLD+ N +SD GLA +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+GEG+ G V A + +AVK +D ++ +N + + L H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
E + L EY G L D + + + R + YLH + +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GI 125
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ K N+LLD+ N +SD GLA +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+GEG+ G V A + +AVK +D ++ +N + + L H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEIXINKMLNHENVVKFYGH 73
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
E + L EY G L D + + + R + YLH + +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GI 126
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ K N+LLD+ N +SD GLA +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+GEG+ G V A + +AVK +D ++ +N + + L H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
E + L EY G L D + + + R + YLH + +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GI 125
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ K N+LLD+ N +SD GLA +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 418 IGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR-LRHPNIVTLAG 475
+G G+ G V + +G+I AVK+I A ++ QE+ L + R + P VT G
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRI-RATVNSQEQKRLLXDLDISXRTVDCPFTVTFYG 100
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
G + E + + +L D + + + ++A+ +ALE+LH S
Sbjct: 101 ALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--S 157
Query: 536 VVHRNFKSANILLD 549
V+HR+ K +N+L++
Sbjct: 158 VIHRDVKPSNVLIN 171
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+GEG+ G V A + +AVK +D ++ +N + + L H N+V G+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
E + L EY G L D + + + R + YLH + +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GI 125
Query: 537 VHRNFKSANILLDDELNPHLSDCGLAAL 564
HR+ K N+LLD+ N +SD GLA +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 62/151 (41%), Gaps = 21/151 (13%)
Query: 418 IGEGSLG--RVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG 475
IG G+ G R+ R + +N +++AVK I+ + ++N + N LRHPNIV
Sbjct: 27 IGSGNFGVARLMRDKQSN-ELVAVKYIERGE---KIDENVKREIINHRSLRHPNIVRFKE 82
Query: 476 YCAEHGQRLLVYEYVGNGNLHDML----HFADDSSKNLTWNARVRVALGTARALEYLHEV 531
+V EY G L + + F++D ++ + Y H +
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQ--------LISGVSYCHAM 134
Query: 532 CLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
V HR+ K N LLD P L C
Sbjct: 135 ---QVCHRDLKLENTLLDGSPAPRLKICAFG 162
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 73/171 (42%), Gaps = 16/171 (9%)
Query: 412 FSQEFLIGEGSLGRVYRAEFANGKIM-AVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNI 470
++ E IG GS G V A +I A KKI +++ D F + + M L HPNI
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKI--PKYFVEDVDRFKQEIEIMKSLDHPNI 68
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHD-MLHFADDSSKNLTWNARVRVALGTARALEYLH 529
+ L ++ LV E G L + ++H + + R+ A+ Y H
Sbjct: 69 IRLYETFEDNTDIYLVMELCTGGELFERVVH-----KRVFRESDAARIMKDVLSAVAYCH 123
Query: 530 EVCLPSVVHRNFKSANILL--DDELNP-HLSDCGLAA-LTPNTERQVITGT 576
++ +V HR+ K N L D +P L D GLAA P + GT
Sbjct: 124 KL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGT 171
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 73/171 (42%), Gaps = 16/171 (9%)
Query: 412 FSQEFLIGEGSLGRVYRAEFANGKIM-AVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNI 470
++ E IG GS G V A +I A KKI +++ D F + + M L HPNI
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKI--PKYFVEDVDRFKQEIEIMKSLDHPNI 85
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHD-MLHFADDSSKNLTWNARVRVALGTARALEYLH 529
+ L ++ LV E G L + ++H + + R+ A+ Y H
Sbjct: 86 IRLYETFEDNTDIYLVMELCTGGELFERVVH-----KRVFRESDAARIMKDVLSAVAYCH 140
Query: 530 EVCLPSVVHRNFKSANILL--DDELNP-HLSDCGLAA-LTPNTERQVITGT 576
++ +V HR+ K N L D +P L D GLAA P + GT
Sbjct: 141 KL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGT 188
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 438 AVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHD 497
A+K I ++S LE V+ + L HPNI+ L + + LV E G L D
Sbjct: 66 AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFD 125
Query: 498 -MLHFADDSSKNLTWNARVRVALGTARALE---YLHEVCLPSVVHRNFKSANILLDDELN 553
++H + +N V A+ + L YLH+ ++VHR+ K N+LL+ +
Sbjct: 126 EIIH-------RMKFN-EVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEK 174
Query: 554 PHL---SDCGLAALTPNTER 570
L D GL+A+ N ++
Sbjct: 175 DALIKIVDFGLSAVFENQKK 194
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 21/150 (14%)
Query: 418 IGEGSLG--RVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG 475
IG G+ G R+ R + +N +++AVK I+ + ++N + N LRHPNIV
Sbjct: 26 IGSGNFGVARLMRDKQSN-ELVAVKYIERGE---KIDENVKREIINHRSLRHPNIVRFKE 81
Query: 476 YCAEHGQRLLVYEYVGNGNLHDML----HFADDSSKNLTWNARVRVALGTARALEYLHEV 531
+V EY G L + + F++D ++ + Y H +
Sbjct: 82 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQ--------LISGVSYCHAM 133
Query: 532 CLPSVVHRNFKSANILLDDELNPHLSDCGL 561
V HR+ K N LLD P L C
Sbjct: 134 ---QVCHRDLKLENTLLDGSPAPRLKICDF 160
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 18/141 (12%)
Query: 418 IGEGSLGRVY---RAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLA 474
+G G+ G VY R + + K A+K+I+ +S+ + ++ + L+HPN+++L
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISM----SACREIALLRELKHPNVISLQ 84
Query: 475 GYCAEHGQR--LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEY----- 527
H R L+++Y HD+ H + V++ G ++L Y
Sbjct: 85 KVFLSHADRKVWLLFDYAE----HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDG 140
Query: 528 LHEVCLPSVVHRNFKSANILL 548
+H + V+HR+ K ANIL+
Sbjct: 141 IHYLHANWVLHRDLKPANILV 161
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 69/148 (46%), Gaps = 18/148 (12%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+ E G +++ + G + VK + S ++ +F E + HPN++ + G C
Sbjct: 18 LNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 478 ----AEHGQRLLVYEYVGNGNLHDMLH----FADDSSKNLTWNARVRVALGTARALEYLH 529
A H L+ ++ G+L+++LH F D S+ V+ AL AR + +LH
Sbjct: 77 QSPPAPHPT--LITHWMPYGSLYNVLHEGTNFVVDQSQA------VKFALDMARGMAFLH 128
Query: 530 EVCLPSVVHRNFKSANILLDDELNPHLS 557
+ P + S ++++D+++ +S
Sbjct: 129 TL-EPLIPRHALNSRSVMIDEDMTARIS 155
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 21/169 (12%)
Query: 393 SPITATSYTVASLQTATNSFSQEF-----------LIGEGSLGRVYRAEFANGKIMAVKK 441
S ++A S+ + QT+ F QE+ LIG+G G+VY + +G++ A++
Sbjct: 7 SLLSARSFPRKASQTSI--FLQEWDIPFEQLEIGELIGKGRFGQVYHGRW-HGEV-AIRL 62
Query: 442 IDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHF 501
ID + + F V + RH N+V G C ++ L+ ++
Sbjct: 63 IDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVR- 121
Query: 502 ADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD 550
D+ L N ++A + + YLH ++H++ KS N+ D+
Sbjct: 122 --DAKIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYDN 165
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 15/175 (8%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALS----LQEEDNFLEAVSNMSRL-RHPNIV 471
+G G+ G+V A F GK AV K+ L E++ + + MS L +H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNA--RVRVALGTARALEYLH 529
L G C G L++ EY G+L + L ++N L + L +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 530 EVCL-------PSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGTS 577
+V + +HR+ + N+LL + + D GLA N ++ G +
Sbjct: 174 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 228
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 7/149 (4%)
Query: 418 IGEGSLGRVYR-AEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IG G+ G V + +G+IMAVK+I + +++ ++ M P IV G
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 477 CAEHGQRLLVYEYVGNG--NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLP 534
G + E + + ++ D + ++ L T +AL +L E
Sbjct: 90 LFREGDCWICMELMSTSFDKFYKYVYSVLDDV--IPEEILGKITLATVKALNHLKENL-- 145
Query: 535 SVVHRNFKSANILLDDELNPHLSDCGLAA 563
++HR+ K +NILLD N L D G++
Sbjct: 146 KIIHRDIKPSNILLDRSGNIKLCDFGISG 174
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 22/166 (13%)
Query: 407 TATNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEED----NFLEAVSN 461
++++ F Q +G G+ VY+ G +A+K++ L E+ + +S
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEV-----KLDSEEGTPSTAIREISL 56
Query: 462 MSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFAD-----DSSKNLTWNARVR 516
M L+H NIV L + LV+E++ N D+ + D ++ + L N
Sbjct: 57 MKELKHENIVRLYDVIHTENKLTLVFEFMDN----DLKKYMDSRTVGNTPRGLELNLVKY 112
Query: 517 VALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ L + HE ++HR+ K N+L++ L D GLA
Sbjct: 113 FQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLA 155
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 21/150 (14%)
Query: 409 TNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNA-ALSLQEEDNFLEAVSNMSRLR 466
T F + IG G G V++ + +G I A+K+ A S+ E++ E ++ +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 467 HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHD--------MLHFADDSSKNLTWNARVRVA 518
H ++V AE L+ EY G+L D M +F + K+L
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLL-------- 121
Query: 519 LGTARALEYLHEVCLPSVVHRNFKSANILL 548
L R L Y+H + S+VH + K +NI +
Sbjct: 122 LQVGRGLRYIHSM---SLVHMDIKPSNIFI 148
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 63/149 (42%), Gaps = 13/149 (8%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAAL--SLQEEDNFLEAVSNMSRLRHPNIVTLA 474
IG G +V A G+++A+K +D L L +EA+ N LRH +I L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKN---LRHQHICQLY 74
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLP 534
+ +V EY G L D + D S+ T RV V A+ Y+H
Sbjct: 75 HVLETANKIFMVLEYCPGGELFDYIISQDRLSEEET---RV-VFRQIVSAVAYVHS---Q 127
Query: 535 SVVHRNFKSANILLDDELNPHLSDCGLAA 563
HR+ K N+L D+ L D GL A
Sbjct: 128 GYAHRDLKPENLLFDEYHKLKLIDFGLCA 156
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 21/150 (14%)
Query: 409 TNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNA-ALSLQEEDNFLEAVSNMSRLR 466
T F + IG G G V++ + +G I A+K+ A S+ E++ E ++ +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 467 HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHD--------MLHFADDSSKNLTWNARVRVA 518
H ++V AE L+ EY G+L D M +F + K+L
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLL-------- 119
Query: 519 LGTARALEYLHEVCLPSVVHRNFKSANILL 548
L R L Y+H + S+VH + K +NI +
Sbjct: 120 LQVGRGLRYIHSM---SLVHMDIKPSNIFI 146
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 18/151 (11%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEED-----NFLEAVSNMSRLRHPNIV 471
IGEG+ G V++A+ +I+A+K++ L ++D + L + + L+H NIV
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV-----RLDDDDEGVPSSALREICLLKELKHKNIV 64
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV 531
L + LV+E+ D+ + D + +L + L + H
Sbjct: 65 RLHDVLHSDKKLTLVFEFCD----QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 532 CLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+V+HR+ K N+L++ L+D GLA
Sbjct: 121 ---NVLHRDLKPQNLLINRNGELKLADFGLA 148
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 21/150 (14%)
Query: 409 TNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNA-ALSLQEEDNFLEAVSNMSRLR 466
T F + IG G G V++ + +G I A+K+ A S+ E++ E ++ +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 467 HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHD--------MLHFADDSSKNLTWNARVRVA 518
H ++V AE L+ EY G+L D M +F + K+L
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLL-------- 119
Query: 519 LGTARALEYLHEVCLPSVVHRNFKSANILL 548
L R L Y+H + S+VH + K +NI +
Sbjct: 120 LQVGRGLRYIHSM---SLVHMDIKPSNIFI 146
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 15/167 (8%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--A 474
IG GS VY+ + +A ++ + L+ E F E + L+HPNIV +
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 475 GYCAEHGQR--LLVYEYVGNGNLHDML-HFADDSSKNL-TWNARVRVALGTARALEYLHE 530
G++ +LV E +G L L F K L +W ++ + L++LH
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFLH- 146
Query: 531 VCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALTPNTERQVITGT 576
P ++HR+ K NI + + D GLA L + + + GT
Sbjct: 147 TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGT 193
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 21/150 (14%)
Query: 409 TNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNA-ALSLQEEDNFLEAVSNMSRLR 466
T F + IG G G V++ + +G I A+K+ A S+ E++ E ++ +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 467 HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHD--------MLHFADDSSKNLTWNARVRVA 518
H ++V AE L+ EY G+L D M +F + K+L
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLL-------- 117
Query: 519 LGTARALEYLHEVCLPSVVHRNFKSANILL 548
L R L Y+H + S+VH + K +NI +
Sbjct: 118 LQVGRGLRYIHSM---SLVHMDIKPSNIFI 144
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 82/183 (44%), Gaps = 39/183 (21%)
Query: 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKID--------NAALSLQEEDNFLEAVS 460
N+F Q ++G+G G V + A GK+ A KK++ A++L E+ LE V+
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEK-QILEKVN 242
Query: 461 NMSRLRHPNIVTLAGYCAEHGQRL-LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL 519
SR +V+LA Y E L LV + G+L ++ +
Sbjct: 243 --SRF----VVSLA-YAYETKDALCLVLTLMNGGDLKFHIYHMGQA------------GF 283
Query: 520 GTARALEYLHEVCL-------PSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572
ARA+ Y E+C +V+R+ K NILLDD + +SD GLA P E Q
Sbjct: 284 PEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVP--EGQT 341
Query: 573 ITG 575
I G
Sbjct: 342 IKG 344
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAG 475
+G+G+ V R + + A K I+ LS ++ LE + + RL +HPNIV L
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQK-LEREARICRLLKHPNIVRLHD 97
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535
+E G LV++ V G L F D ++ + + + + LE ++ +
Sbjct: 98 SISEEGFHYLVFDLVTGGEL-----FEDIVARE--YYSEADASHCIHQILESVNHIHQHD 150
Query: 536 VVHRNFKSANILLDDELN---PHLSDCGLA 562
+VHR+ K N+LL + L+D GLA
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLA 180
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 13/157 (8%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAG 475
+G+G+ G V+++ + G+++AVKKI +A + + + ++ L H NIV L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 476 YCAEHGQR--LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
R LV++Y+ +LH ++ + L + V + ++YLH L
Sbjct: 77 VLRADNDRDVYLVFDYM-ETDLHAVIR-----ANILEPVHKQYVVYQLIKVIKYLHSGGL 130
Query: 534 PSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570
+HR+ K +NILL+ E + ++D GL+ N R
Sbjct: 131 ---LHRDMKPSNILLNAECHVKVADFGLSRSFVNIRR 164
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 82/183 (44%), Gaps = 39/183 (21%)
Query: 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKID--------NAALSLQEEDNFLEAVS 460
N+F Q ++G+G G V + A GK+ A KK++ A++L E+ LE V+
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEK-QILEKVN 242
Query: 461 NMSRLRHPNIVTLAGYCAEHGQRL-LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL 519
SR +V+LA Y E L LV + G+L ++ +
Sbjct: 243 --SRF----VVSLA-YAYETKDALCLVLTLMNGGDLKFHIYHMGQA------------GF 283
Query: 520 GTARALEYLHEVCL-------PSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572
ARA+ Y E+C +V+R+ K NILLDD + +SD GLA P E Q
Sbjct: 284 PEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVP--EGQT 341
Query: 573 ITG 575
I G
Sbjct: 342 IKG 344
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAG 475
IG+G+ V R + G A K I+ LS ++ LE + + RL +H NIV L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQK-LEREARICRLLKHSNIVRLHD 70
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA-RALEYLHEVCLP 534
+E G LV++ V G L F D ++ A + A+ + H++
Sbjct: 71 SISEEGFHYLVFDLVTGGEL-----FEDIVAREYYSEADASHCIQQILEAVLHCHQM--- 122
Query: 535 SVVHRNFKSANILLDDELN---PHLSDCGLA 562
VVHR+ K N+LL + L+D GLA
Sbjct: 123 GVVHRDLKPENLLLASKCKGAAVKLADFGLA 153
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 18/158 (11%)
Query: 424 GRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483
G+ Y A+F + ++ + + ++ E N L + RHPNI+TL
Sbjct: 37 GKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI------RHPNIITLHDIFENKTDV 90
Query: 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKS 543
+L+ E V G L D L ++LT + + + YLH + H + K
Sbjct: 91 VLILELVSGGELFDFLA----EKESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKP 143
Query: 544 ANILLDDELNPH----LSDCGLA-ALTPNTERQVITGT 576
NI+L D+ P+ L D G+A + E + I GT
Sbjct: 144 ENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGT 181
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 18/158 (11%)
Query: 424 GRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483
G+ Y A+F + ++ + + ++ E N L + RHPNI+TL
Sbjct: 30 GKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI------RHPNIITLHDIFENKTDV 83
Query: 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKS 543
+L+ E V G L D L ++LT + + + YLH + H + K
Sbjct: 84 VLILELVSGGELFDFLA----EKESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKP 136
Query: 544 ANILLDDELNPH----LSDCGLA-ALTPNTERQVITGT 576
NI+L D+ P+ L D G+A + E + I GT
Sbjct: 137 ENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGT 174
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 11/148 (7%)
Query: 418 IGEGSLGRVYRAE--FANGKIMAVKKIDNAALSLQEE-DNFLEAVSNMSRLRHPNIVTLA 474
+G G + VY AE N K+ A+K I +E F V N S+L H NIV++
Sbjct: 19 LGGGGMSTVYLAEDTILNIKV-AIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI 77
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLP 534
E LV EY+ L + + +S L+ + + +++ H++
Sbjct: 78 DVDEEDDCYYLVMEYIEGPTLSEYI----ESHGPLSVDTAINFTNQILDGIKHAHDM--- 130
Query: 535 SVVHRNFKSANILLDDELNPHLSDCGLA 562
+VHR+ K NIL+D + D G+A
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDFGIA 158
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 60/150 (40%), Gaps = 17/150 (11%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IG GS R A AVK ID + EE L + +HPNI+TL
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEIL-----LRYGQHPNIITLKDV 89
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
+ LV E + G L D + K + V + +EYLH V
Sbjct: 90 YDDGKHVYLVTELMRGGELLDKIL----RQKFFSEREASFVLHTIGKTVEYLHS---QGV 142
Query: 537 VHRNFKSANILLDDEL-NPH---LSDCGLA 562
VHR+ K +NIL DE NP + D G A
Sbjct: 143 VHRDLKPSNILYVDESGNPECLRICDFGFA 172
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 20/191 (10%)
Query: 391 IKSPITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAE----FANGKIMAVKKIDNAA 446
+K + + T + + +F ++G G+ G+V+ GK+ A+K + A
Sbjct: 35 VKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKAT 94
Query: 447 LSLQEEDNFLEAVSNMSRLRH----PNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFA 502
+ +Q+ + L H P +VTL + L+ +Y+ G L F
Sbjct: 95 I-VQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGEL-----FT 148
Query: 503 DDSSKNLTWNARVRVALGT-ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561
S + V++ +G ALE+LH++ +++R+ K NILLD + L+D GL
Sbjct: 149 HLSQRERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGL 205
Query: 562 AA--LTPNTER 570
+ + TER
Sbjct: 206 SKEFVADETER 216
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 21/146 (14%)
Query: 418 IGEGSLG--RVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG 475
IG G+ G R+ R + AN +++AVK I+ + ++N + N LRHPNIV
Sbjct: 27 IGAGNFGVARLMRDKQAN-ELVAVKYIERGE---KIDENVKREIINHRSLRHPNIVRFKE 82
Query: 476 YCAEHGQRLLVYEYVGNGNLHDML----HFADDSSKNLTWNARVRVALGTARALEYLHEV 531
+V EY G L + + F++D ++ + Y H +
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQ--------LISGVSYAHAM 134
Query: 532 CLPSVVHRNFKSANILLDDELNPHLS 557
V HR+ K N LLD P L
Sbjct: 135 ---QVAHRDLKLENTLLDGSPAPRLK 157
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 18/158 (11%)
Query: 424 GRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483
G+ Y A+F + + + + ++ E N L + RHPNI+TL
Sbjct: 51 GKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREI------RHPNIITLHDIFENKTDV 104
Query: 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKS 543
+L+ E V G L D L ++LT + + + YLH + H + K
Sbjct: 105 VLILELVSGGELFDFLA----EKESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKP 157
Query: 544 ANILLDDELNPH----LSDCGLA-ALTPNTERQVITGT 576
NI+L D+ P+ L D G+A + E + I GT
Sbjct: 158 ENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGT 195
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 74/185 (40%), Gaps = 28/185 (15%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALS----LQEEDNFLEAVSNMSRL-RHPNIV 471
+G G+ G+V A F GK AV K+ L E++ + + MS L +H NIV
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLH-------------------FADDSSKNLTWN 512
L G C G L++ EY G+L + L + + L
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 513 ARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572
+ + A+ + +L + +HR+ + N+LL + + D GLA N +
Sbjct: 159 DLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 215
Query: 573 ITGTS 577
+ G +
Sbjct: 216 VKGNA 220
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 60/150 (40%), Gaps = 17/150 (11%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
IG GS R A AVK ID + EE L + +HPNI+TL
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEIL-----LRYGQHPNIITLKDV 89
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536
+ LV E + G L D + K + V + +EYLH V
Sbjct: 90 YDDGKHVYLVTELMRGGELLDKIL----RQKFFSEREASFVLHTIGKTVEYLHS---QGV 142
Query: 537 VHRNFKSANILLDDEL-NPH---LSDCGLA 562
VHR+ K +NIL DE NP + D G A
Sbjct: 143 VHRDLKPSNILYVDESGNPECLRICDFGFA 172
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 58/155 (37%), Gaps = 29/155 (18%)
Query: 430 EFANGKIMAVKKIDNAALSLQEEDNFLEA------------------VSNMSRLRHPNIV 471
E +GK VKK + LQ F++ VS + ++HPN++
Sbjct: 18 ELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV 531
TL +L+ E V G L D L ++LT + YLH +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 532 CLPSVVHRNFKSANILLDDELNP----HLSDCGLA 562
+ H + K NI+L D P + D GLA
Sbjct: 134 ---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++G G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 74
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L++ + + G L D + D S L W ++
Sbjct: 75 VDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------ 127
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D GLA L E++
Sbjct: 128 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 174
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 16/166 (9%)
Query: 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNM 462
++ F ++G+GS G+V+ AEF + A+K + + + D+ +E
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM---DDDVECTMVE 68
Query: 463 SRL-----RHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRV 517
R+ HP + + V EY+ G+L M H S +
Sbjct: 69 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQ--SCHKFDLSRATFY 124
Query: 518 ALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563
A L++LH +V+R+ K NILLD + + ++D G+
Sbjct: 125 AAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK 167
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 25/168 (14%)
Query: 417 LIGEGSLGRVYRA----EFANGKI-MAVKKIDNAA--LSLQEEDNFLEAVSNMSRLRHPN 469
++G G G V++ E + KI + +K I++ + S Q + + A+ + L H +
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGS---LDHAH 76
Query: 470 IVTLAGYCAEHGQRL-LVYEYVGNGNLHDMLHF---ADDSSKNLTWNARVRVALGTARAL 525
IV L G C G L LV +Y+ G+L D + A L W ++ A+ +
Sbjct: 77 IVRLLGLCP--GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGM 128
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVI 573
YL E +VHRN + N+LL ++D G+A L P ++Q++
Sbjct: 129 YYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLL 173
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 28/179 (15%)
Query: 397 ATSYTVASLQTATNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEED-- 453
+ S + A T+ + + + +GEG+ G VY+A + + +A+K+I L +EE
Sbjct: 21 SMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRI---RLEHEEEGVP 77
Query: 454 -NFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL-LVYEYVGNGNLHDMLHFADDSSKNLTW 511
+ VS + L+H NI+ L H RL L++EY N D+ + D KN
Sbjct: 78 GTAIREVSLLKELQHRNIIELKS-VIHHNHRLHLIFEYAEN----DLKKYMD---KNPDV 129
Query: 512 NARVRVAL--GTARALEYLH-EVCLPSVVHRNFKSANILL---DDELNPHLS--DCGLA 562
+ RV + + + H CL HR+ K N+LL D P L D GLA
Sbjct: 130 SMRVIKSFLYQLINGVNFCHSRRCL----HRDLKPQNLLLSVSDASETPVLKIGDFGLA 184
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 51/214 (23%)
Query: 373 PAEKL--VIERVAKSGSLKKIKSPITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRA- 429
P+EK V+ R+ K L+K+K ++G G G V++
Sbjct: 16 PSEKANKVLARIFKETELRKLK------------------------VLGSGVFGTVHKGV 51
Query: 430 ---EFANGKI-MAVKKIDNAA--LSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483
E + KI + +K I++ + S Q + + A+ + L H +IV L G C G
Sbjct: 52 WIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGS---LDHAHIVRLLGLCP--GSS 106
Query: 484 L-LVYEYVGNGNLHDMLHF---ADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHR 539
L LV +Y+ G+L D + A L W ++ A+ + YL E +VHR
Sbjct: 107 LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYLEEH---GMVHR 157
Query: 540 NFKSANILLDDELNPHLSDCGLAALTPNTERQVI 573
N + N+LL ++D G+A L P ++Q++
Sbjct: 158 NLAARNVLLKSPSQVQVADFGVADLLPPDDKQLL 191
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 60/148 (40%), Gaps = 21/148 (14%)
Query: 418 IGEGSLG--RVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG 475
IG G+ G R+ R + +N +++AVK I+ + N + N LRHPNIV
Sbjct: 27 IGSGNFGVARLMRDKQSN-ELVAVKYIERGE---KIAANVKREIINHRSLRHPNIVRFKE 82
Query: 476 YCAEHGQRLLVYEYVGNGNLHDML----HFADDSSKNLTWNARVRVALGTARALEYLHEV 531
+V EY G L + + F++D ++ + Y H +
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQ--------LISGVSYCHAM 134
Query: 532 CLPSVVHRNFKSANILLDDELNPHLSDC 559
V HR+ K N LLD P L C
Sbjct: 135 ---QVCHRDLKLENTLLDGSPAPRLKIC 159
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 418 IGEGSLGRVYRAEF--ANGKIM--AVKKIDNAALSLQEE-DNFLEAVSNMSRLRHPNIVT 472
+G+GS G V R E+ +GK + AVK + LS E D+F+ V+ M L H N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 473 LAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
L G + +V E G+L D L + R A+ A + YL
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLR---KHQGHFLLGTLSRYAVQVAEGMGYLES-- 139
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVI 573
+HR+ + N+LL + D GL P + +
Sbjct: 140 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXV 179
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 418 IGEGSLGRVYRAEF--ANGKIM--AVKKIDNAALSLQEE-DNFLEAVSNMSRLRHPNIVT 472
+G+GS G V R E+ +GK + AVK + LS E D+F+ V+ M L H N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 473 LAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
L G + +V E G+L D L + R A+ A + YL
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLR---KHQGHFLLGTLSRYAVQVAEGMGYLES-- 139
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVI 573
+HR+ + N+LL + D GL P + +
Sbjct: 140 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 179
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++G G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 77
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L++ + + G L D + D S L W ++
Sbjct: 78 VDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 130
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D GLA L E++
Sbjct: 131 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 177
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++G G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 75
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L++ + + G L D + D S L W ++
Sbjct: 76 VDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 128
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D GLA L E++
Sbjct: 129 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 175
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++G G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 76
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L++ + + G L D + D S L W ++
Sbjct: 77 VDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 129
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D GLA L E++
Sbjct: 130 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 176
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 418 IGEGSLGRVYRAEF--ANGKIM--AVKKIDNAALSLQEE-DNFLEAVSNMSRLRHPNIVT 472
+G+GS G V R E+ +GK + AVK + LS E D+F+ V+ M L H N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 473 LAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
L G + +V E G+L D L + R A+ A + YL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLR---KHQGHFLLGTLSRYAVQVAEGMGYLES-- 133
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVI 573
+HR+ + N+LL + D GL P + +
Sbjct: 134 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 173
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 71/181 (39%), Gaps = 25/181 (13%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-------HPNI 470
+G G+ G+V A A G I + + A L+ + E + MS L+ H NI
Sbjct: 31 LGAGAFGKVVEAT-AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 89
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDS--------------SKNLTWNARVR 516
V L G C G L++ EY G+L + L DS L +
Sbjct: 90 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 149
Query: 517 VALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
+ A+ + +L + +HR+ + NILL + D GLA N V+ G
Sbjct: 150 FSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 206
Query: 577 S 577
+
Sbjct: 207 A 207
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 418 IGEGSLGRVYRAEF--ANGKIM--AVKKIDNAALSLQEE-DNFLEAVSNMSRLRHPNIVT 472
+G+GS G V R E+ +GK + AVK + LS E D+F+ V+ M L H N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 473 LAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
L G + +V E G+L D L + R A+ A + YL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLR---KHQGHFLLGTLSRYAVQVAEGMGYLES-- 133
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVI 573
+HR+ + N+LL + D GL P + +
Sbjct: 134 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 173
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 69/174 (39%), Gaps = 17/174 (9%)
Query: 405 LQTATNSFSQEFLI----GEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAV 459
+ A+ FS + + G+G+ V R G A K I+ LS ++
Sbjct: 20 MMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREA 79
Query: 460 SNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL 519
+L+HPNIV L E LV++ V G L F D ++ A +
Sbjct: 80 RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL-----FEDIVAREFYSEADASHCI 134
Query: 520 GTA-RALEYLHEVCLPSVVHRNFKSANILLDDELNP---HLSDCGLAALTPNTE 569
++ Y H +VHRN K N+LL + L+D GLA ++E
Sbjct: 135 QQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 185
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 71/181 (39%), Gaps = 25/181 (13%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-------HPNI 470
+G G+ G+V A A G I + + A L+ + E + MS L+ H NI
Sbjct: 54 LGAGAFGKVVEAT-AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 112
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDS--------------SKNLTWNARVR 516
V L G C G L++ EY G+L + L DS L +
Sbjct: 113 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 172
Query: 517 VALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
+ A+ + +L + +HR+ + NILL + D GLA N V+ G
Sbjct: 173 FSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGN 229
Query: 577 S 577
+
Sbjct: 230 A 230
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 19/162 (11%)
Query: 417 LIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG 475
LIG GS G VY A N K +A+KK++ L + L ++ ++RL+ I+ L
Sbjct: 33 LIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYD 92
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNL------TWNARVRVALGTARALE-YL 528
LL ++ L+ +L AD K L ++ L E ++
Sbjct: 93 LII--PDDLLKFD-----ELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFI 145
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570
HE ++HR+ K AN LL+ + + + D GLA T N+E+
Sbjct: 146 HE---SGIIHRDLKPANCLLNQDCSVKVCDFGLAR-TINSEK 183
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 418 IGEGSLGRVYRAEF--ANGKIM--AVKKIDNAALSLQEE-DNFLEAVSNMSRLRHPNIVT 472
+G+GS G V R E+ +GK + AVK + LS E D+F+ V+ M L H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 473 LAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
L G + +V E G+L D L + R A+ A + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLR---KHQGHFLLGTLSRYAVQVAEGMGYLES-- 129
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVI 573
+HR+ + N+LL + D GL P + +
Sbjct: 130 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 169
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 418 IGEGSLGRVYRAEF--ANGKIM--AVKKIDNAALSLQEE-DNFLEAVSNMSRLRHPNIVT 472
+G+GS G V R E+ +GK + AVK + LS E D+F+ V+ M L H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 473 LAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
L G + +V E G+L D L + R A+ A + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLR---KHQGHFLLGTLSRYAVQVAEGMGYLES-- 129
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVI 573
+HR+ + N+LL + D GL P + +
Sbjct: 130 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXV 169
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 10/103 (9%)
Query: 467 HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALE 526
HPNIV L + LV E + G L + + K+ + + A+
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERI----KKKKHFSETEASYIMRKLVSAVS 120
Query: 527 YLHEVCLPSVVHRNFKSANILLDDE---LNPHLSDCGLAALTP 566
++H+V VVHR+ K N+L DE L + D G A L P
Sbjct: 121 HMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP 160
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 22/162 (13%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-------HPN 469
+G G+ G+V A+ F K + + A L+E E + MS L+ H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTV--AVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 470 IVTLAGYCAEHGQRLLV-YEYVGNGNL--------HDMLHFADDSSKNLTWNARVRVALG 520
+V L G C + G L+V E+ GNL ++ + + D LT + +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQ 152
Query: 521 TARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
A+ +E+L +HR+ + NILL ++ + D GLA
Sbjct: 153 VAKGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLA 191
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++G G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 74
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L++ + + G L D + D S L W ++
Sbjct: 75 VDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 127
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D GLA L E++
Sbjct: 128 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 174
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 17/166 (10%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLE-AVSNMSRLRHPNIVTLA 474
++G G+ V+ + GK+ A+K I + D+ LE ++ + +++H NIVTL
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAF---RDSSLENEIAVLKKIKHENIVTLE 72
Query: 475 GYCAEHGQRLLVYEYVGNGNLHD-MLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
LV + V G L D +L + K+ + V A++YLHE
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDAS-----LVIQQVLSAVKYLHE--- 124
Query: 534 PSVVHRNFKSANIL-LDDELNPH--LSDCGLAALTPNTERQVITGT 576
+VHR+ K N+L L E N ++D GL+ + N GT
Sbjct: 125 NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGT 170
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++G G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 73
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L++ + + G L D + D S L W ++
Sbjct: 74 VDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 126
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D GLA L E++
Sbjct: 127 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++G G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 73
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L+ + + G L D + D S L W ++
Sbjct: 74 VDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------ 126
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D GLA L E++
Sbjct: 127 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDN-----FLEAVSNMSRLRHPNIV 471
IGEG+ G V++A+ +I+A+K++ L ++D L + + L+H NIV
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV-----RLDDDDEGVPSSALREICLLKELKHKNIV 64
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV 531
L + LV+E+ D+ + D + +L + L + H
Sbjct: 65 RLHDVLHSDKKLTLVFEFCD----QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 532 CLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+V+HR+ K N+L++ L++ GLA
Sbjct: 121 ---NVLHRDLKPQNLLINRNGELKLANFGLA 148
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 13/140 (9%)
Query: 418 IGEGSLGRVYRAEFANGK------IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471
+G G+ G VY + + +AVK + S Q+E +FL +S+L H NIV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKLNHQNIV 111
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFA---DDSSKNLTWNARVRVALGTARALEYL 528
G + R ++ E + G+L L +L + VA A +YL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 529 HEVCLPSVVHRNFKSANILL 548
E +HR+ + N LL
Sbjct: 172 EEN---HFIHRDIAARNCLL 188
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 71/181 (39%), Gaps = 25/181 (13%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-------HPNI 470
+G G+ G+V A A G I + + A L+ + E + MS L+ H NI
Sbjct: 47 LGAGAFGKVVEAT-AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 105
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDS--------------SKNLTWNARVR 516
V L G C G L++ EY G+L + L DS L +
Sbjct: 106 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 165
Query: 517 VALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
+ A+ + +L + +HR+ + NILL + D GLA N V+ G
Sbjct: 166 FSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 222
Query: 577 S 577
+
Sbjct: 223 A 223
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 418 IGEGSLGRVYRAEF--ANGKIM--AVKKIDNAALSLQEE-DNFLEAVSNMSRLRHPNIVT 472
+G+GS G V R E+ +GK + AVK + LS E D+F+ V+ M L H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 473 LAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
L G + +V E G+L D L + R A+ A + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLR---KHQGHFLLGTLSRYAVQVAEGMGYLES-- 129
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVI 573
+HR+ + N+LL + D GL P + +
Sbjct: 130 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 169
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 71/181 (39%), Gaps = 25/181 (13%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-------HPNI 470
+G G+ G+V A A G I + + A L+ + E + MS L+ H NI
Sbjct: 49 LGAGAFGKVVEAT-AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 107
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDS--------------SKNLTWNARVR 516
V L G C G L++ EY G+L + L DS L +
Sbjct: 108 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 167
Query: 517 VALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
+ A+ + +L + +HR+ + NILL + D GLA N V+ G
Sbjct: 168 FSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 224
Query: 577 S 577
+
Sbjct: 225 A 225
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++G G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 76
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L+ + + G L D + D S L W ++
Sbjct: 77 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 129
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D GLA L E++
Sbjct: 130 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 176
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++G G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 75
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L+ + + G L D + D S L W ++
Sbjct: 76 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 128
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D GLA L E++
Sbjct: 129 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 175
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++G G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 80
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L+ + + G L D + D S L W ++
Sbjct: 81 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 133
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D GLA L E++
Sbjct: 134 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 180
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 64/159 (40%), Gaps = 17/159 (10%)
Query: 409 TNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH 467
T+ + + IG GS R A AVK ID + EE L + +H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEIL-----LRYGQH 75
Query: 468 PNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEY 527
PNI+TL + +V E + G L D + K + V + +EY
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELMKGGELLDKIL----RQKFFSEREASAVLFTITKTVEY 131
Query: 528 LHEVCLPSVVHRNFKSANILLDDEL-NPH---LSDCGLA 562
LH VVHR+ K +NIL DE NP + D G A
Sbjct: 132 LHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFA 167
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 71/181 (39%), Gaps = 25/181 (13%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-------HPNI 470
+G G+ G+V A A G I + + A L+ + E + MS L+ H NI
Sbjct: 54 LGAGAFGKVVEAT-AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 112
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDS--------------SKNLTWNARVR 516
V L G C G L++ EY G+L + L DS L +
Sbjct: 113 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 172
Query: 517 VALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
+ A+ + +L + +HR+ + NILL + D GLA N V+ G
Sbjct: 173 FSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 229
Query: 577 S 577
+
Sbjct: 230 A 230
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 16/153 (10%)
Query: 417 LIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-----RHPNI 470
++G+GS G+V+ AEF + A+K + + + D+ +E R+ HP +
Sbjct: 24 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM---DDDVECTMVEKRVLSLAWEHPFL 80
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE 530
+ V EY+ G+L M H S + A L++LH
Sbjct: 81 THMFCTFQTKENLFFVMEYLNGGDL--MYHIQ--SCHKFDLSRATFYAAEIILGLQFLHS 136
Query: 531 VCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563
+V+R+ K NILLD + + ++D G+
Sbjct: 137 ---KGIVYRDLKLDNILLDKDGHIKIADFGMCK 166
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++G G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 76
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L+ + + G L D + D S L W ++
Sbjct: 77 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 129
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D GLA L E++
Sbjct: 130 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 176
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++G G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 98
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L+ + + G L D + D S L W ++
Sbjct: 99 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 151
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D GLA L E++
Sbjct: 152 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 198
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 13/140 (9%)
Query: 418 IGEGSLGRVYRAEFANGK------IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471
+G G+ G VY + + +AVK + S Q+E +FL +S+L H NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKLNHQNIV 97
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFA---DDSSKNLTWNARVRVALGTARALEYL 528
G + R ++ E + G+L L +L + VA A +YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 529 HEVCLPSVVHRNFKSANILL 548
E +HR+ + N LL
Sbjct: 158 EEN---HFIHRDIAARNCLL 174
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 10/149 (6%)
Query: 417 LIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSN--MSRLRHPNIVTLA 474
++G+GS G+V A+ + + KI + +Q++D V ++ L P +T
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 475 GYCAEHGQRL-LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
C + RL V EYV G+L M H V A + L +LH+
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDL--MYHIQ--QVGKFKEPQAVFYAAEISIGLFFLHKR-- 139
Query: 534 PSVVHRNFKSANILLDDELNPHLSDCGLA 562
+++R+ K N++LD E + ++D G+
Sbjct: 140 -GIIYRDLKLDNVMLDSEGHIKIADFGMC 167
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++G G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 67
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L+ + + G L D + D S L W ++
Sbjct: 68 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 120
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D GLA L E++
Sbjct: 121 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 167
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++G G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 73
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L+ + + G L D + D S L W ++
Sbjct: 74 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 126
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D GLA L E++
Sbjct: 127 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++G G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 79
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L+ + + G L D + D S L W ++
Sbjct: 80 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 132
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D GLA L E++
Sbjct: 133 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 179
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++G G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 73
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L+ + + G L D + D S L W ++
Sbjct: 74 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 126
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D GLA L E++
Sbjct: 127 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 22/162 (13%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-------HPN 469
+G G+ G+V A+ F K + + A L+E E + MS L+ H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTV--AVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 470 IVTLAGYCAEHGQRLLV-YEYVGNGNL--------HDMLHFADDSSKNLTWNARVRVALG 520
+V L G C + G L+V E+ GNL ++ + + D LT + +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQ 152
Query: 521 TARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
A+ +E+L +HR+ + NILL ++ + D GLA
Sbjct: 153 VAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLA 191
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++G G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 76
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L+ + + G L D + D S L W ++
Sbjct: 77 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 129
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D GLA L E++
Sbjct: 130 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 176
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 29/155 (18%)
Query: 430 EFANGKIMAVKKIDNAALSLQEEDNFLEA------------------VSNMSRLRHPNIV 471
E +G+ VKK + LQ F++ VS + ++HPN++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV 531
TL +L+ E V G L D L ++LT + YLH +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 532 CLPSVVHRNFKSANILLDDELNP----HLSDCGLA 562
+ H + K NI+L D P + D GLA
Sbjct: 134 ---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 29/155 (18%)
Query: 430 EFANGKIMAVKKIDNAALSLQEEDNFLEA------------------VSNMSRLRHPNIV 471
E +G+ VKK + LQ F++ VS + ++HPN++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV 531
TL +L+ E V G L D L ++LT + YLH +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 532 CLPSVVHRNFKSANILLDDELNP----HLSDCGLA 562
+ H + K NI+L D P + D GLA
Sbjct: 134 ---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 108 SLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQ 167
SL ++S N + DTI LPP + L+L SN +P + + +L LNV+ N L
Sbjct: 400 SLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIKS-IPKQVVKLEALQELNVASNQLKS 458
Query: 168 SIGDIFGNLAGLATLDLSFN 187
IF L L + L N
Sbjct: 459 VPDGIFDRLTSLQKIWLHTN 478
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 63/159 (39%), Gaps = 17/159 (10%)
Query: 409 TNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH 467
T+ + + IG GS R A AVK ID + EE L + +H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEIL-----LRYGQH 75
Query: 468 PNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEY 527
PNI+TL + +V E G L D + K + V + +EY
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELXKGGELLDKIL----RQKFFSEREASAVLFTITKTVEY 131
Query: 528 LHEVCLPSVVHRNFKSANILLDDEL-NPH---LSDCGLA 562
LH VVHR+ K +NIL DE NP + D G A
Sbjct: 132 LHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFA 167
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 29/155 (18%)
Query: 430 EFANGKIMAVKKIDNAALSLQEEDNFLEA------------------VSNMSRLRHPNIV 471
E +G+ VKK + LQ F++ VS + ++HPN++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV 531
TL +L+ E V G L D L ++LT + YLH +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 532 CLPSVVHRNFKSANILLDDELNP----HLSDCGLA 562
+ H + K NI+L D P + D GLA
Sbjct: 134 ---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 29/155 (18%)
Query: 430 EFANGKIMAVKKIDNAALSLQEEDNFLEA------------------VSNMSRLRHPNIV 471
E +G+ VKK + LQ F++ VS + ++HPN++
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV 531
TL +L+ E V G L D L ++LT + YLH +
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYYLHSL 132
Query: 532 CLPSVVHRNFKSANILLDDELNP----HLSDCGLA 562
+ H + K NI+L D P + D GLA
Sbjct: 133 ---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 16/140 (11%)
Query: 418 IGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G G V R + G+ +A+K+ LS + + + + M +L HPN+V+ A
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQC-RQELSPKNRERWCLEIQIMKKLNHPNVVS-ARE 80
Query: 477 CAEHGQR-------LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALG-TARALEYL 528
+ Q+ LL EY G+L L+ ++ L +R L + AL YL
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCC-GLK-EGPIRTLLSDISSALRYL 138
Query: 529 HEVCLPSVVHRNFKSANILL 548
HE ++HR+ K NI+L
Sbjct: 139 HE---NRIIHRDLKPENIVL 155
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 29/155 (18%)
Query: 430 EFANGKIMAVKKIDNAALSLQEEDNFLEA------------------VSNMSRLRHPNIV 471
E +G+ VKK + LQ F++ VS + ++HPN++
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV 531
TL +L+ E V G L D L ++LT + YLH +
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYYLHSL 132
Query: 532 CLPSVVHRNFKSANILLDDELNP----HLSDCGLA 562
+ H + K NI+L D P + D GLA
Sbjct: 133 ---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++G G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 83
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L+ + + G L D + D S L W ++
Sbjct: 84 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 136
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D GLA L E++
Sbjct: 137 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 183
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 29/155 (18%)
Query: 430 EFANGKIMAVKKIDNAALSLQEEDNFLEA------------------VSNMSRLRHPNIV 471
E +G+ VKK + LQ F++ VS + ++HPN++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV 531
TL +L+ E V G L D L ++LT + YLH +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 532 CLPSVVHRNFKSANILLDDELNP----HLSDCGLA 562
+ H + K NI+L D P + D GLA
Sbjct: 134 ---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 16/140 (11%)
Query: 418 IGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G G G V R + G+ +A+K+ LS + + + + M +L HPN+V+ A
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQC-RQELSPKNRERWCLEIQIMKKLNHPNVVS-ARE 79
Query: 477 CAEHGQR-------LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALG-TARALEYL 528
+ Q+ LL EY G+L L+ ++ L +R L + AL YL
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCC-GLK-EGPIRTLLSDISSALRYL 137
Query: 529 HEVCLPSVVHRNFKSANILL 548
HE ++HR+ K NI+L
Sbjct: 138 HE---NRIIHRDLKPENIVL 154
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 29/155 (18%)
Query: 430 EFANGKIMAVKKIDNAALSLQEEDNFLEA------------------VSNMSRLRHPNIV 471
E +G+ VKK + LQ F++ VS + ++HPN++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV 531
TL +L+ E V G L D L ++LT + YLH +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 532 CLPSVVHRNFKSANILLDDELNP----HLSDCGLA 562
+ H + K NI+L D P + D GLA
Sbjct: 134 ---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 29/155 (18%)
Query: 430 EFANGKIMAVKKIDNAALSLQEEDNFLEA------------------VSNMSRLRHPNIV 471
E +G+ VKK + LQ F++ VS + ++HPN++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV 531
TL +L+ E V G L D L ++LT + YLH +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 532 CLPSVVHRNFKSANILLDDELNP----HLSDCGLA 562
+ H + K NI+L D P + D GLA
Sbjct: 134 ---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 29/155 (18%)
Query: 430 EFANGKIMAVKKIDNAALSLQEEDNFLEA------------------VSNMSRLRHPNIV 471
E +G+ VKK + LQ F++ VS + ++HPN++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV 531
TL +L+ E V G L D L ++LT + YLH +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 532 CLPSVVHRNFKSANILLDDELNP----HLSDCGLA 562
+ H + K NI+L D P + D GLA
Sbjct: 134 ---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 12/149 (8%)
Query: 418 IGEGSLGRVYRAEFANGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL 473
IGEG G V++ + + + +A+K N S + FL+ M + HP+IV L
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKL 104
Query: 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
G E+ ++ E G L L S L + + A + AL YL
Sbjct: 105 IGVITENPV-WIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLES--- 157
Query: 534 PSVVHRNFKSANILLDDELNPHLSDCGLA 562
VHR+ + N+L+ L D GL+
Sbjct: 158 KRFVHRDIAARNVLVSSNDCVKLGDFGLS 186
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 29/155 (18%)
Query: 430 EFANGKIMAVKKIDNAALSLQEEDNFLEA------------------VSNMSRLRHPNIV 471
E +G+ VKK + LQ F++ VS + ++HPN++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV 531
TL +L+ E V G L D L ++LT + YLH +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 532 CLPSVVHRNFKSANILLDDELNP----HLSDCGLA 562
+ H + K NI+L D P + D GLA
Sbjct: 134 ---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 63/157 (40%), Gaps = 13/157 (8%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G+G+ V R G A K I+ LS ++ +L+HPNIV L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA-RALEYLHEVCLPS 535
E LV++ V G L F D ++ A + ++ Y H
Sbjct: 74 IQEESFHYLVFDLVTGGEL-----FEDIVAREFYSEADASHCIQQILESIAYCHS---NG 125
Query: 536 VVHRNFKSANILLDDELN---PHLSDCGLAALTPNTE 569
+VHRN K N+LL + L+D GLA ++E
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 162
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 63/157 (40%), Gaps = 13/157 (8%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G+G+ V R G A K I+ LS ++ +L+HPNIV L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA-RALEYLHEVCLPS 535
E LV++ V G L F D ++ A + ++ Y H
Sbjct: 74 IQEESFHYLVFDLVTGGEL-----FEDIVAREFYSEADASHCIQQILESIAYCHS---NG 125
Query: 536 VVHRNFKSANILLDDELN---PHLSDCGLAALTPNTE 569
+VHRN K N+LL + L+D GLA ++E
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 162
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 63/157 (40%), Gaps = 13/157 (8%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476
+G+G+ V R G A K I+ LS ++ +L+HPNIV L
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA-RALEYLHEVCLPS 535
E LV++ V G L F D ++ A + ++ Y H
Sbjct: 73 IQEESFHYLVFDLVTGGEL-----FEDIVAREFYSEADASHCIQQILESIAYCHS---NG 124
Query: 536 VVHRNFKSANILLDDELN---PHLSDCGLAALTPNTE 569
+VHRN K N+LL + L+D GLA ++E
Sbjct: 125 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 161
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 28/165 (16%)
Query: 418 IGEGSLGRVYRAEFANG------KIMAVKKIDNAALSLQEE--DNFLEAVSN----MSRL 465
+G G+ G V + NG K++ + D S + + F E + N + L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 466 RHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDML---HFADDSSKNLTWNARVRVALGTA 522
HPNI+ L + LV E+ G L + + H D+ N ++ G
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECD---AANIMKQILSGIC 160
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDE---LNPHLSDCGLAAL 564
YLH+ ++VHR+ K NILL+++ LN + D GL++
Sbjct: 161 ----YLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSF 198
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 29/155 (18%)
Query: 430 EFANGKIMAVKKIDNAALSLQEEDNFLEA------------------VSNMSRLRHPNIV 471
E +G+ VKK + LQ F++ VS + ++HPN++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV 531
TL +L+ E V G L D L ++LT + YLH +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 532 CLPSVVHRNFKSANILLDDELNP----HLSDCGLA 562
+ H + K NI+L D P + D GLA
Sbjct: 134 ---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 14/163 (8%)
Query: 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFL-EAV 459
+ LQ + +IG G+ G V A+ K+ A+K + + + + F E
Sbjct: 67 IRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEER 126
Query: 460 SNMSRLRHPNIVTLAGYCAEHGQRLL--VYEYVGNGNLHDMLHFADDSSKNLTWNARVRV 517
M+ P +V L +CA + L V EY+ G+L +++ D K W A+
Sbjct: 127 DIMAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEK---W-AKFYT 180
Query: 518 ALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560
A AL+ +H + L +HR+ K N+LLD + L+D G
Sbjct: 181 A-EVVLALDAIHSMGL---IHRDVKPDNMLLDKHGHLKLADFG 219
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 61/147 (41%), Gaps = 17/147 (11%)
Query: 420 EGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE 479
E S G Y A+F + ++ ++ + ED E VS + ++HPN++TL
Sbjct: 32 EKSTGLQYAAKF-----IKKRRTKSSRRGVSREDIERE-VSILKEIQHPNVITLHEVYEN 85
Query: 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHR 539
+L+ E V G L D L ++LT + YLH + + H
Sbjct: 86 KTDVILILELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYYLHSL---QIAHF 138
Query: 540 NFKSANILLDDELNP----HLSDCGLA 562
+ K NI+L D P + D GLA
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 12/149 (8%)
Query: 418 IGEGSLGRVYRAEFANGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL 473
IGEG G V++ + + + +A+K N S + FL+ M + HP+IV L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
G E+ ++ E G L L S L + + A + AL YL
Sbjct: 77 IGVITENPV-WIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLES--- 129
Query: 534 PSVVHRNFKSANILLDDELNPHLSDCGLA 562
VHR+ + N+L+ L D GL+
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 16/156 (10%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALS----LQEEDNFLEAVSNMSRLRHPNIV 471
+IG+G+ V R G+ AVK +D A + L ED EA S L+HP+IV
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREA-SICHMLKHPHIV 89
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARV--RVALGTARALEYLH 529
L + G +V+E++ +L + ++ V AL Y H
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADL--CFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 530 EVCLPSVVHRNFKSANILLDDELNP---HLSDCGLA 562
+ +++HR+ K N+LL + N L D G+A
Sbjct: 148 D---NNIIHRDVKPENVLLASKENSAPVKLGDFGVA 180
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 12/149 (8%)
Query: 418 IGEGSLGRVYRAEFANGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL 473
IGEG G V++ + + + +A+K N S + FL+ M + HP+IV L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
G E+ ++ E G L L S L + + A + AL YL
Sbjct: 77 IGVITENPV-WIIMELCTLGELRSFLQVRKFS---LDLASLILYAYQLSTALAYLES--- 129
Query: 534 PSVVHRNFKSANILLDDELNPHLSDCGLA 562
VHR+ + N+L+ L D GL+
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 12/149 (8%)
Query: 418 IGEGSLGRVYRAEFANGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL 473
IGEG G V++ + + + +A+K N S + FL+ M + HP+IV L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKL 81
Query: 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
G E+ ++ E G L L S L + + A + AL YL
Sbjct: 82 IGVITENPV-WIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLES--- 134
Query: 534 PSVVHRNFKSANILLDDELNPHLSDCGLA 562
VHR+ + N+L+ L D GL+
Sbjct: 135 KRFVHRDIAARNVLVSSNDCVKLGDFGLS 163
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 12/149 (8%)
Query: 418 IGEGSLGRVYRAEFANGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL 473
IGEG G V++ + + + +A+K N S + FL+ M + HP+IV L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
G E+ ++ E G L L S L + + A + AL YL
Sbjct: 77 IGVITENPV-WIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLES--- 129
Query: 534 PSVVHRNFKSANILLDDELNPHLSDCGLA 562
VHR+ + N+L+ L D GL+
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++G G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 70
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L+ + + G L D + D S L W ++
Sbjct: 71 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 123
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A + YL + L VHR+ + N+L+ + ++D GLA L E++
Sbjct: 124 AEGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 170
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 13/140 (9%)
Query: 418 IGEGSLGRVYRAEFANGK------IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471
+G G+ G VY + + +AVK + S Q+E +FL +S+ H NIV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIV 111
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFA---DDSSKNLTWNARVRVALGTARALEYL 528
G + R ++ E + G+L L +L + VA A +YL
Sbjct: 112 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 529 HEVCLPSVVHRNFKSANILL 548
E +HR+ + N LL
Sbjct: 172 EEN---HFIHRDIAARNCLL 188
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 13/140 (9%)
Query: 418 IGEGSLGRVYRAEFANGK------IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471
+G G+ G VY + + +AVK + S Q+E +FL +S+ H NIV
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIV 88
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFA---DDSSKNLTWNARVRVALGTARALEYL 528
G + R ++ E + G+L L +L + VA A +YL
Sbjct: 89 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 529 HEVCLPSVVHRNFKSANILL 548
E +HR+ + N LL
Sbjct: 149 EEN---HFIHRDIAARNCLL 165
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 20/169 (11%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG 475
++G+G+ G VY + +N +A+K+I + E ++ L+H NIV G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP--LHEEIALHKHLKHKNIVQYLG 86
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALE---YLHEVC 532
+E+G + E V G+L +L S + + T + LE YLH+
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALLR----SKWGPLKDNEQTIGFYTKQILEGLKYLHD-- 140
Query: 533 LPSVVHRNFKSANILLDDELNP-HLSDCG----LAALTPNTERQVITGT 576
+VHR+ K N+L++ +SD G LA + P TE TGT
Sbjct: 141 -NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE--TFTGT 186
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 12/149 (8%)
Query: 418 IGEGSLGRVYRAEFANGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL 473
IGEG G V++ + + + +A+K N S + FL+ M + HP+IV L
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKL 79
Query: 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
G E+ ++ E G L L S L + + A + AL YL
Sbjct: 80 IGVITENPV-WIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLES--- 132
Query: 534 PSVVHRNFKSANILLDDELNPHLSDCGLA 562
VHR+ + N+L+ L D GL+
Sbjct: 133 KRFVHRDIAARNVLVSSNDCVKLGDFGLS 161
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 13/140 (9%)
Query: 418 IGEGSLGRVYRAEFANGK------IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471
+G G+ G VY + + +AVK + S Q+E +FL +S+ H NIV
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIV 137
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFA---DDSSKNLTWNARVRVALGTARALEYL 528
G + R ++ E + G+L L +L + VA A +YL
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 529 HEVCLPSVVHRNFKSANILL 548
E +HR+ + N LL
Sbjct: 198 EEN---HFIHRDIAARNCLL 214
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 12/149 (8%)
Query: 418 IGEGSLGRVYRAEFANGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL 473
IGEG G V++ + + + +A+K N S + FL+ M + HP+IV L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKL 78
Query: 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
G E+ ++ E G L L S L + + A + AL YL
Sbjct: 79 IGVITENPV-WIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLES--- 131
Query: 534 PSVVHRNFKSANILLDDELNPHLSDCGLA 562
VHR+ + N+L+ L D GL+
Sbjct: 132 KRFVHRDIAARNVLVSSNDCVKLGDFGLS 160
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 13/140 (9%)
Query: 418 IGEGSLGRVYRAEFANGK------IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471
+G G+ G VY + + +AVK + S Q+E +FL +S+ H NIV
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIV 113
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFA---DDSSKNLTWNARVRVALGTARALEYL 528
G + R ++ E + G+L L +L + VA A +YL
Sbjct: 114 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 529 HEVCLPSVVHRNFKSANILL 548
E +HR+ + N LL
Sbjct: 174 EEN---HFIHRDIAARNCLL 190
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 13/140 (9%)
Query: 418 IGEGSLGRVYRAEFANGK------IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471
+G G+ G VY + + +AVK + S Q+E +FL +S+ H NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIV 97
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFA---DDSSKNLTWNARVRVALGTARALEYL 528
G + R ++ E + G+L L +L + VA A +YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 529 HEVCLPSVVHRNFKSANILL 548
E +HR+ + N LL
Sbjct: 158 EEN---HFIHRDIAARNCLL 174
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 31/158 (19%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQE------EDNFLEAVSNMSRLRHPNIV 471
+G G+ G V + + M K+ID A L++ + + M +L +P IV
Sbjct: 18 LGCGNFGSVRQGVYR----MRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 73
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV 531
L G C +LV E G G LH L R + + E LH+V
Sbjct: 74 RLIGVCQAEAL-MLVMEMAGGGPLHKFL-------------VGKREEIPVSNVAELLHQV 119
Query: 532 CL-------PSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ + VHR+ + N+LL + +SD GL+
Sbjct: 120 SMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLS 157
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 13/140 (9%)
Query: 418 IGEGSLGRVYRAEFANGK------IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471
+G G+ G VY + + +AVK + S Q+E +FL +S+ H NIV
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIV 103
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFA---DDSSKNLTWNARVRVALGTARALEYL 528
G + R ++ E + G+L L +L + VA A +YL
Sbjct: 104 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 529 HEVCLPSVVHRNFKSANILL 548
E +HR+ + N LL
Sbjct: 164 EEN---HFIHRDIAARNCLL 180
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 12/149 (8%)
Query: 418 IGEGSLGRVYRAEFANGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL 473
IGEG G V++ + + + +A+K N S + FL+ M + HP+IV L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
G E+ ++ E G L L S L + + A + AL YL
Sbjct: 74 IGVITENPV-WIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLES--- 126
Query: 534 PSVVHRNFKSANILLDDELNPHLSDCGLA 562
VHR+ + N+L+ L D GL+
Sbjct: 127 KRFVHRDIAARNVLVSSNDCVKLGDFGLS 155
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 20/169 (11%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG 475
++G+G+ G VY + +N +A+K+I + E ++ L+H NIV G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP--LHEEIALHKHLKHKNIVQYLG 72
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALE---YLHEVC 532
+E+G + E V G+L +L S + + T + LE YLH+
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSALLR----SKWGPLKDNEQTIGFYTKQILEGLKYLHD-- 126
Query: 533 LPSVVHRNFKSANILLDDELNP-HLSDCG----LAALTPNTERQVITGT 576
+VHR+ K N+L++ +SD G LA + P TE TGT
Sbjct: 127 -NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE--TFTGT 172
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 13/140 (9%)
Query: 418 IGEGSLGRVYRAEFANGK------IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471
+G G+ G VY + + +AVK + S Q+E +FL +S+ H NIV
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIV 96
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFA---DDSSKNLTWNARVRVALGTARALEYL 528
G + R ++ E + G+L L +L + VA A +YL
Sbjct: 97 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 529 HEVCLPSVVHRNFKSANILL 548
E +HR+ + N LL
Sbjct: 157 EEN---HFIHRDIAARNCLL 173
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 29/155 (18%)
Query: 430 EFANGKIMAVKKIDNAALSLQEEDNFLEA------------------VSNMSRLRHPNIV 471
E +G+ VKK + LQ F++ VS + ++HPN++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV 531
TL +L+ E V G L D L ++LT + YLH +
Sbjct: 78 TLHEVYENKTDVILIGELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 532 CLPSVVHRNFKSANILLDDELNP----HLSDCGLA 562
+ H + K NI+L D P + D GLA
Sbjct: 134 ---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 24/164 (14%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-------HPN 469
+G G+ G+V A+ F K + + A L+E E + MS L+ H N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTV--AVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 470 IVTLAGYCAEHGQRLLV-YEYVGNGNLHDML---------HFADDSSKN-LTWNARVRVA 518
+V L G C + G L+V E+ GNL L + +D K+ LT + +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYS 154
Query: 519 LGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
A+ +E+L +HR+ + NILL ++ + D GLA
Sbjct: 155 FQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 13/140 (9%)
Query: 418 IGEGSLGRVYRAEFANGK------IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471
+G G+ G VY + + +AVK + S Q+E +FL +S+ H NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIV 97
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFA---DDSSKNLTWNARVRVALGTARALEYL 528
G + R ++ E + G+L L +L + VA A +YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 529 HEVCLPSVVHRNFKSANILL 548
E +HR+ + N LL
Sbjct: 158 EEN---HFIHRDIAARNCLL 174
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 13/140 (9%)
Query: 418 IGEGSLGRVYRAEFANGK------IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471
+G G+ G VY + + +AVK + S Q+E +FL +S+ H NIV
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIV 96
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFA---DDSSKNLTWNARVRVALGTARALEYL 528
G + R ++ E + G+L L +L + VA A +YL
Sbjct: 97 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 529 HEVCLPSVVHRNFKSANILL 548
E +HR+ + N LL
Sbjct: 157 EEN---HFIHRDIAARNCLL 173
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 13/140 (9%)
Query: 418 IGEGSLGRVYRAEFANGK------IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471
+G G+ G VY + + +AVK + S Q+E +FL +S+ H NIV
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIV 114
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFA---DDSSKNLTWNARVRVALGTARALEYL 528
G + R ++ E + G+L L +L + VA A +YL
Sbjct: 115 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 529 HEVCLPSVVHRNFKSANILL 548
E +HR+ + N LL
Sbjct: 175 EEN---HFIHRDIAARNCLL 191
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 18/148 (12%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477
+ E G +++ + G + VK + S ++ +F E + HPN++ + G C
Sbjct: 18 LNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 478 ----AEHGQRLLVYEYVGNGNLHDMLH----FADDSSKNLTWNARVRVALGTARALEYLH 529
A H L+ + G+L+++LH F D S+ V+ AL AR +LH
Sbjct: 77 QSPPAPHPT--LITHWXPYGSLYNVLHEGTNFVVDQSQA------VKFALDXARGXAFLH 128
Query: 530 EVCLPSVVHRNFKSANILLDDELNPHLS 557
+ P + S ++ +D++ +S
Sbjct: 129 TL-EPLIPRHALNSRSVXIDEDXTARIS 155
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 81/199 (40%), Gaps = 29/199 (14%)
Query: 386 GSLKKIKSPITATSY---TVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKI 442
GS+K I S + Y V N + + +G ++ E + K A+KK
Sbjct: 4 GSMKDILSNYSNLIYLNKYVKEKDKYINDYRIIRTLNQGKFNKIILCE-KDNKFYALKKY 62
Query: 443 DNAALSLQEE---------------DNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487
+ + L + + D+F + ++ +++ +T G + + ++Y
Sbjct: 63 EKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIY 122
Query: 488 EYVGNGNL--HDMLHFADDSSKNLTWNARVRVALGTARA----LEYLHEVCLPSVVHRNF 541
EY+ N ++ D F D KN T ++V ++ Y+H ++ HR+
Sbjct: 123 EYMENDSILKFDEYFFVLD--KNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDV 178
Query: 542 KSANILLDDELNPHLSDCG 560
K +NIL+D LSD G
Sbjct: 179 KPSNILMDKNGRVKLSDFG 197
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 12/149 (8%)
Query: 418 IGEGSLGRVYRAEFANGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL 473
IGEG G V++ + + + +A+K N S + FL+ M + HP+IV L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
G E+ ++ E G L L S L + + A + AL YL
Sbjct: 77 IGVITENPV-WIIMELCTLGELRSFLQVRKFS---LDLASLILYAYQLSTALAYLES--- 129
Query: 534 PSVVHRNFKSANILLDDELNPHLSDCGLA 562
VHR+ + N+L+ L D GL+
Sbjct: 130 KRFVHRDIAARNVLVSATDCVKLGDFGLS 158
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 12/164 (7%)
Query: 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDN-FLEAVSNM 462
Q ++ + + +G G+ G V + G A+K I ++++ L+ V+ +
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVL 75
Query: 463 SRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA 522
+L HPNI+ L + + LV E G L D + S+ +V GT
Sbjct: 76 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTT 135
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDELNPHL---SDCGLAA 563
YLH+ ++VHR+ K N+LL+ + L D GL+A
Sbjct: 136 ----YLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSA 172
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 54/139 (38%), Gaps = 11/139 (7%)
Query: 418 IGEGSLGRVYRAEFAN-----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
+G G+ G VY + + + K S Q+E +FL +S+ H NIV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 473 LAGYCAEHGQRLLVYEYVGNGNLHDMLHFA---DDSSKNLTWNARVRVALGTARALEYLH 529
G + R ++ E + G+L L +L + VA A +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 530 EVCLPSVVHRNFKSANILL 548
E +HR+ + N LL
Sbjct: 173 EN---HFIHRDIAARNCLL 188
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/159 (18%), Positives = 68/159 (42%), Gaps = 6/159 (3%)
Query: 405 LQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR 464
++ + F + +G G+ G V++ ++ +K+ + + + + + +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARA 524
P IV G G+ + E++ G+L +L A + + +V++ +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKG 116
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563
L YL E ++HR+ K +NIL++ L D G++
Sbjct: 117 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSG 153
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
+ F + +G G+ G V + + ++ +K+ + + + + + + P
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH 529
IV G G+ + E++ G+L +L +K + +V++ R L YL
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVL----KEAKRIPEEILGKVSIAVLRGLAYLR 131
Query: 530 EVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563
E ++HR+ K +NIL++ L D G++
Sbjct: 132 EKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSG 163
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 20/162 (12%)
Query: 410 NSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHP 468
+ + LIG GS G V A + +++A+KKI L + L ++ ++RL H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 469 NIVTLAGYC----AEHGQRLLVYEYVGNGNLHDM----LHFADDSSKNLTWNARVRVALG 520
++V + E L V + + + + ++ + K L +N V
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLV----- 167
Query: 521 TARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
++Y+H ++HR+ K AN L++ + + + D GLA
Sbjct: 168 ---GVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++G G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 75
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L++ + + G L D + D S L W ++
Sbjct: 76 VDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 128
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D G A L E++
Sbjct: 129 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 175
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++G G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 75
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L++ + + G L D + D S L W ++
Sbjct: 76 VDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 128
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D G A L E++
Sbjct: 129 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 175
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 13/140 (9%)
Query: 418 IGEGSLGRVYRAEFANGK------IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471
+G G+ G VY + + +AVK + S Q+E +FL +S+ H NIV
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIV 123
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFA---DDSSKNLTWNARVRVALGTARALEYL 528
G + R ++ E + G+L L +L + VA A +YL
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 529 HEVCLPSVVHRNFKSANILL 548
E +HR+ + N LL
Sbjct: 184 EEN---HFIHRDIAARNCLL 200
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 12/149 (8%)
Query: 418 IGEGSLGRVYRAEFANGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL 473
IGEG G V++ + + + +A+K N S + FL+ M + HP+IV L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
G E+ ++ E G L L S L + + A + AL YL
Sbjct: 457 IGVITENPV-WIIMELCTLGELRSFLQVRKFS---LDLASLILYAYQLSTALAYLES--- 509
Query: 534 PSVVHRNFKSANILLDDELNPHLSDCGLA 562
VHR+ + N+L+ L D GL+
Sbjct: 510 KRFVHRDIAARNVLVSSNDCVKLGDFGLS 538
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 72/172 (41%), Gaps = 6/172 (3%)
Query: 405 LQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR 464
++ + F + +G G+ G V++ ++ +K+ + + + + + +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARA 524
P IV G G+ + E++ G+L +L A + + +V++ +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKG 116
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
L YL E ++HR+ K +NIL++ L D G++ ++ GT
Sbjct: 117 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 166
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 72/172 (41%), Gaps = 6/172 (3%)
Query: 405 LQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR 464
++ + F + +G G+ G V++ ++ +K+ + + + + + +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARA 524
P IV G G+ + E++ G+L +L A + + +V++ +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKG 116
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
L YL E ++HR+ K +NIL++ L D G++ ++ GT
Sbjct: 117 LTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 166
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 72/172 (41%), Gaps = 6/172 (3%)
Query: 405 LQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR 464
++ + F + +G G+ G V++ ++ +K+ + + + + + +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARA 524
P IV G G+ + E++ G+L +L A + + +V++ +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKG 116
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
L YL E ++HR+ K +NIL++ L D G++ ++ GT
Sbjct: 117 LTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 166
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++G G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 77
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L++ + + G L D + D S L W ++
Sbjct: 78 VDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 130
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D G A L E++
Sbjct: 131 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 177
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIV- 471
IGEG+ G V A + N +A+KKI S E + L + + R RH NI+
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKI-----SPFEHQTYCQRTLREIKILLRFRHENIIG 105
Query: 472 ---TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+ E + + + ++ +L+ +L +++L+ + R L+Y+
Sbjct: 106 INDIIRAPTIEQMKDVYLVTHLMGADLYKLL-----KTQHLSNDHICYFLYQILRGLKYI 160
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
H +V+HR+ K +N+LL+ + + D GLA
Sbjct: 161 HSA---NVLHRDLKPSNLLLNTTXDLKICDFGLA 191
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++ G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 80
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L++ + + G L D + D S L W ++
Sbjct: 81 VDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 133
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D GLA L E++
Sbjct: 134 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 180
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 66/158 (41%), Gaps = 16/158 (10%)
Query: 417 LIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQE-----EDNFLEAVSNMSRLRHPNIV 471
L+GEGS G+V E + + + + + E N + + + RLRH N++
Sbjct: 12 LLGEGSYGKV--KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVI 69
Query: 472 TLAG--YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH 529
L Y E + +V EY G + +ML + + L LEYLH
Sbjct: 70 QLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQL--IDGLEYLH 126
Query: 530 EVCLPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTP 566
+VH++ K N+LL +S G+A AL P
Sbjct: 127 SQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHP 161
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 72/172 (41%), Gaps = 6/172 (3%)
Query: 405 LQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR 464
++ + F + +G G+ G V++ ++ +K+ + + + + + +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARA 524
P IV G G+ + E++ G+L +L A + + +V++ +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKG 116
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
L YL E ++HR+ K +NIL++ L D G++ ++ GT
Sbjct: 117 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 166
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIV- 471
IGEG+ G V A + N +A+KKI S E + L + + R RH NI+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI-----SPFEHQTYCQRTLREIKILLRFRHENIIG 87
Query: 472 ---TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+ E + + + + + +L+ +L +++L+ + R L+Y+
Sbjct: 88 INDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLKYI 142
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
H +V+HR+ K +N+LL+ + + D GLA
Sbjct: 143 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 173
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIV- 471
IGEG+ G V A + N +A+KKI S E + L + + R RH NI+
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKI-----SPFEHQTYCQRTLREIKILLRFRHENIIG 93
Query: 472 ---TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+ E + + + + + +L+ +L +++L+ + R L+Y+
Sbjct: 94 INDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLKYI 148
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
H +V+HR+ K +N+LL+ + + D GLA
Sbjct: 149 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 179
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIV- 471
IGEG+ G V A + N +A+KKI S E + L + + R RH NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-----SPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 472 ---TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+ E + + + + + +L+ +L +++L+ + R L+Y+
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLKYI 140
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
H +V+HR+ K +N+LL+ + + D GLA
Sbjct: 141 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 171
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 14/150 (9%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV----T 472
IGEG+ G V A K+ +A+KKI + L + + R RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRT-LREIKILLRFRHENIIGINDI 93
Query: 473 LAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
+ E + + + + + +L+ +L +++L+ + R L+Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLKYIHSA- 147
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+V+HR+ K +N+LL+ + + D GLA
Sbjct: 148 --NVLHRDLKPSNLLLNTTXDLKICDFGLA 175
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIV- 471
IGEG+ G V A + N +A+KKI S E + L + + R RH NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-----SPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 472 ---TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+ E + + + + + +L+ +L +++L+ + R L+Y+
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLKYI 140
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
H +V+HR+ K +N+LL+ + + D GLA
Sbjct: 141 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 171
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 15/163 (9%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR 464
Q N +G G+ G+V++ F G ++AVK++ + + + ++ +
Sbjct: 21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKS 80
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRV----ALG 520
P IV G + + E +G A+ K + R+ +
Sbjct: 81 HDCPYIVQCFGTFITNTDVFIAMELMGT--------CAEKLKKRMQGPIPERILGKMTVA 132
Query: 521 TARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563
+AL YL E V+HR+ K +NILLD+ L D G++
Sbjct: 133 IVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISG 173
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIV- 471
IGEG+ G V A + N +A+KKI S E + L + + R RH NI+
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKI-----SPFEHQTYCQRTLREIKILLRFRHENIIG 105
Query: 472 ---TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+ E + + + + + +L+ +L +++L+ + R L+Y+
Sbjct: 106 INDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLKYI 160
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
H +V+HR+ K +N+LL+ + + D GLA
Sbjct: 161 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 191
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++G G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 80
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L+ + + G L D + D S L W ++
Sbjct: 81 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 133
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D G A L E++
Sbjct: 134 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 180
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 23/172 (13%)
Query: 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEE------DNFLEAVSNM 462
F + ++G G+ G VY+ + G+ + KI A + L+E L+ M
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIMELREATSPKANKEILDEAYVM 105
Query: 463 SRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVAL 519
+ + +P++ L G C +L+ + + G L D + D S L W ++
Sbjct: 106 ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 160
Query: 520 GTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D GLA L E++
Sbjct: 161 --AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 207
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 26/166 (15%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-------HPN 469
+G G+ G+V A+ F K + + A L+E E + MS L+ H N
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTV--AVKMLKEGATHSEHRALMSELKILIHIGHHLN 129
Query: 470 IVTLAGYCAEHGQRLLV-YEYVGNGNLHDMLH-----------FADDSSKN-LTWNARVR 516
+V L G C + G L+V E+ GNL L +D K+ LT +
Sbjct: 130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 189
Query: 517 VALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ A+ +E+L +HR+ + NILL ++ + D GLA
Sbjct: 190 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLA 232
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIV- 471
IGEG+ G V A + N +A+KKI S E + L + + R RH NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-----SPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 472 ---TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+ E + + + + + +L+ +L +++L+ + R L+Y+
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLKYI 140
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
H +V+HR+ K +N+LL+ + + D GLA
Sbjct: 141 HSA---NVLHRDLKPSNLLLNTTXDLKICDFGLA 171
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIV- 471
IGEG+ G V A + N +A+KKI S E + L + + R RH NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-----SPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 472 ---TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+ E + + + + + +L+ +L +++L+ + R L+Y+
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLKYI 140
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
H +V+HR+ K +N+LL+ + + D GLA
Sbjct: 141 HSA---NVLHRDLKPSNLLLNTTXDLKICDFGLA 171
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 25/165 (15%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-------HPN 469
+G G+ G+V A+ F K + + A L+E E + MS L+ H N
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTV--AVKMLKEGATHSEHRALMSELKILIHIGHHLN 93
Query: 470 IVTLAGYCAEHGQRLLV-YEYVGNGNLHDMLH----------FADDSSKN-LTWNARVRV 517
+V L G C + G L+V E+ GNL L +D K+ LT +
Sbjct: 94 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICY 153
Query: 518 ALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ A+ +E+L +HR+ + NILL ++ + D GLA
Sbjct: 154 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIV- 471
IGEG+ G V A + N +A+KKI S E + L + + R RH NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-----SPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 472 ---TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+ E + + + + + +L+ +L +++L+ + R L+Y+
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLKYI 140
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
H +V+HR+ K +N+LL+ + + D GLA
Sbjct: 141 HSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLA 171
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++ G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 80
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L+ + + G L D + D S L W ++
Sbjct: 81 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 133
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D GLA L E++
Sbjct: 134 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 180
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Query: 412 FSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNF----LEAVSNMSRLR 466
++Q IGEG+ G V A + +A+KKI S E + L + + R R
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKI-----SPFEHQTYCQRTLREIQILLRFR 99
Query: 467 HPNIV----TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTA 522
H N++ L E + + + + + +L+ +L S+ L+ +
Sbjct: 100 HENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLL-----KSQQLSNDHICYFLYQIL 154
Query: 523 RALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
R L+Y+H +V+HR+ K +N+L++ + + D GLA +
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARI 193
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++G G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 73
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L+ + + G L D + D S L W ++
Sbjct: 74 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 126
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D G A L E++
Sbjct: 127 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 173
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++G G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 75
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L+ + + G L D + D S L W ++
Sbjct: 76 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 128
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D G A L E++
Sbjct: 129 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 175
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Query: 417 LIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQE-EDNFLEAVSNMSRLRHPNIVTLA 474
++G G G V+ + A GK+ A KK++ L ++ + ++++ IV+LA
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLP 534
LV + G++ ++ D+ + + LE+LH+
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR--- 308
Query: 535 SVVHRNFKSANILLDDELNPHLSDCGLA 562
++++R+ K N+LLDD+ N +SD GLA
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 12/149 (8%)
Query: 418 IGEGSLGRVYRAEFANGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL 473
IGEG G V++ + + + +A+K N S + FL+ M + HP+IV L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
G E+ ++ E G L L S L + + A + AL YL
Sbjct: 457 IGVITENPV-WIIMELCTLGELRSFLQVRKFS---LDLASLILYAYQLSTALAYLES--- 509
Query: 534 PSVVHRNFKSANILLDDELNPHLSDCGLA 562
VHR+ + N+L+ L D GL+
Sbjct: 510 KRFVHRDIAARNVLVSATDCVKLGDFGLS 538
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIV- 471
IGEG+ G V A K+ +A+KKI S E + L + + R RH NI+
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKI-----SPFEHQTYCQRTLREIKILLRFRHENIIG 83
Query: 472 ---TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+ E + + + + + +L+ +L +++L+ + R L+Y+
Sbjct: 84 INDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLKYI 138
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
H +V+HR+ K +N+LL+ + + D GLA
Sbjct: 139 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 169
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 19/170 (11%)
Query: 410 NSFSQEFLIGEGSLGRVYRA----EFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSR 464
F + ++ G+ G VY+ E KI +A+K++ A S + L+ M+
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMAS 73
Query: 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGT 521
+ +P++ L G C +L+ + + G L D + D S L W ++
Sbjct: 74 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 126
Query: 522 ARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571
A+ + YL + L VHR+ + N+L+ + ++D GLA L E++
Sbjct: 127 AKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Query: 417 LIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQE-EDNFLEAVSNMSRLRHPNIVTLA 474
++G G G V+ + A GK+ A KK++ L ++ + ++++ IV+LA
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLP 534
LV + G++ ++ D+ + + LE+LH+
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR--- 308
Query: 535 SVVHRNFKSANILLDDELNPHLSDCGLA 562
++++R+ K N+LLDD+ N +SD GLA
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Query: 417 LIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQE-EDNFLEAVSNMSRLRHPNIVTLA 474
++G G G V+ + A GK+ A KK++ L ++ + ++++ IV+LA
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLP 534
LV + G++ ++ D+ + + LE+LH+
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR--- 308
Query: 535 SVVHRNFKSANILLDDELNPHLSDCGLA 562
++++R+ K N+LLDD+ N +SD GLA
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 26/166 (15%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-------HPN 469
+G G+ G+V A+ F K + + A L+E E + MS L+ H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTV--AVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 470 IVTLAGYCAEHGQRLLVY-EYVGNGNLHDMLH-----------FADDSSKN-LTWNARVR 516
+V L G C + G L+V E+ GNL L +D K+ LT +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 517 VALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ A+ +E+L +HR+ + NILL ++ + D GLA
Sbjct: 144 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLA 186
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 26/166 (15%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-------HPN 469
+G G+ G+V A+ F K + + A L+E E + MS L+ H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTV--AVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 470 IVTLAGYCAEHGQRLLVY-EYVGNGNLHDMLH-----------FADDSSKN-LTWNARVR 516
+V L G C + G L+V E+ GNL L +D K+ LT +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 517 VALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ A+ +E+L +HR+ + NILL ++ + D GLA
Sbjct: 144 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLA 186
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 26/166 (15%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-------HPN 469
+G G+ G+V A+ F K + + A L+E E + MS L+ H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTV--AVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 470 IVTLAGYCAEHGQRLLV-YEYVGNGNLHDMLH-----------FADDSSKN-LTWNARVR 516
+V L G C + G L+V E+ GNL L +D K+ LT +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 517 VALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ A+ +E+L +HR+ + NILL ++ + D GLA
Sbjct: 153 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIV- 471
IGEG+ G V A K+ +A+KKI S E + L + + R RH NI+
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKI-----SPFEHQTYCQRTLREIKILLRFRHENIIG 83
Query: 472 ---TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+ E + + + + + +L+ +L +++L+ + R L+Y+
Sbjct: 84 INDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLKYI 138
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
H +V+HR+ K +N+LL+ + + D GLA
Sbjct: 139 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 169
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 26/166 (15%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-------HPN 469
+G G+ G+V A+ F K + + A L+E E + MS L+ H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTV--AVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 470 IVTLAGYCAEHGQRLLV-YEYVGNGNLHDMLH-----------FADDSSKN-LTWNARVR 516
+V L G C + G L+V E+ GNL L +D K+ LT +
Sbjct: 84 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 517 VALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ A+ +E+L +HR+ + NILL ++ + D GLA
Sbjct: 144 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLA 186
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 7/149 (4%)
Query: 417 LIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQE--EDNFLEAVSNMSRLRHPNIVTL 473
++G G G V+ + A GK+ A KK++ L ++ + +E ++++ IV+L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK-KILAKVHSRFIVSL 250
Query: 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
A LV + G++ ++ D+ + + LE+LH+
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR-- 308
Query: 534 PSVVHRNFKSANILLDDELNPHLSDCGLA 562
++++R+ K N+LLDD+ N +SD GLA
Sbjct: 309 -NIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIV- 471
IGEG+ G V A K+ +A+KKI S E + L + + R RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-----SPFEHQTYCQRTLREIKILLRFRHENIIG 89
Query: 472 ---TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+ E + + + + + +L+ +L +++L+ + R L+Y+
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLKYI 144
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
H +V+HR+ K +N+LL+ + + D GLA
Sbjct: 145 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 175
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIV- 471
IGEG+ G V A K+ +A+KKI S E + L + + R RH NI+
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKI-----SPFEHQTYCQRTLREIKILLRFRHENIIG 90
Query: 472 ---TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+ E + + + + + +L+ +L +++L+ + R L+Y+
Sbjct: 91 INDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLKYI 145
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
H +V+HR+ K +N+LL+ + + D GLA
Sbjct: 146 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 176
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 26/166 (15%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-------HPN 469
+G G+ G+V A+ F K + + A L+E E + MS L+ H N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTV--AVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 470 IVTLAGYCAEHGQRLLV-YEYVGNGNLHDML-----------HFADDSSKN-LTWNARVR 516
+V L G C + G L+V E+ GNL L +D K+ LT +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLIC 154
Query: 517 VALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ A+ +E+L +HR+ + NILL ++ + D GLA
Sbjct: 155 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLA 197
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIV- 471
IGEG+ G V A K+ +A+KKI S E + L + + R RH NI+
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKI-----SPFEHQTYCQRTLREIKILLRFRHENIIG 91
Query: 472 ---TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+ E + + + + + +L+ +L +++L+ + R L+Y+
Sbjct: 92 INDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLKYI 146
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
H +V+HR+ K +N+LL+ + + D GLA
Sbjct: 147 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 177
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIV- 471
IGEG+ G V A K+ +A+KKI S E + L + + R RH NI+
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKI-----SPFEHQTYCQRTLREIKILLRFRHENIIG 82
Query: 472 ---TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+ E + + + + + +L+ +L +++L+ + R L+Y+
Sbjct: 83 INDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLKYI 137
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
H +V+HR+ K +N+LL+ + + D GLA
Sbjct: 138 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 168
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIV- 471
IGEG+ G V A K+ +A+KKI S E + L + + R RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-----SPFEHQTYCQRTLREIKILLRFRHENIIG 89
Query: 472 ---TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+ E + + + + + +L+ +L +++L+ + R L+Y+
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLKYI 144
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
H +V+HR+ K +N+LL+ + + D GLA
Sbjct: 145 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 175
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 26/166 (15%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-------HPN 469
+G G+ G+V A+ F K + + A L+E E + MS L+ H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTV--AVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 470 IVTLAGYCAEHGQRLLV-YEYVGNGNLHDMLH-----------FADDSSKN-LTWNARVR 516
+V L G C + G L+V E+ GNL L +D K+ LT +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 517 VALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ A+ +E+L +HR+ + NILL ++ + D GLA
Sbjct: 153 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIV- 471
IGEG+ G V A K+ +A+KKI S E + L + + R RH NI+
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKI-----SPFEHQTYCQRTLREIKILLRFRHENIIG 90
Query: 472 ---TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+ E + + + + + +L+ +L +++L+ + R L+Y+
Sbjct: 91 INDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLKYI 145
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
H +V+HR+ K +N+LL+ + + D GLA
Sbjct: 146 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 176
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIV- 471
IGEG+ G V A K+ +A+KKI S E + L + + R RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-----SPFEHQTYCQRTLREIKILLRFRHENIIG 89
Query: 472 ---TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+ E + + + + + +L+ +L +++L+ + R L+Y+
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLKYI 144
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
H +V+HR+ K +N+LL+ + + D GLA
Sbjct: 145 HSA---NVLHRDLKPSNLLLNTTXDLKICDFGLA 175
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 23/173 (13%)
Query: 405 LQTATNSFSQEF----LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLE-- 457
L +SQ++ +G G+ G V+ A + K + VK I + ED ++E
Sbjct: 15 LAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVL---EDCWIEDP 71
Query: 458 -------AVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510
++ +SR+ H NI+ + G LV E G+G D+ F D + L
Sbjct: 72 KLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSG--LDLFAFIDRHPR-LD 128
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563
+ A+ YL L ++HR+ K NI++ ++ L D G AA
Sbjct: 129 EPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAA 178
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 22/154 (14%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIV- 471
IGEG+ G V A K+ +A+KKI S E + L + + R RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-----SPFEHQTYCQRTLREIKILLRFRHENIIG 89
Query: 472 ---TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+ E + + + + + +L+ +L S+ ++ + R L+Y+
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICY-----FLYQILRGLKYI 144
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
H +V+HR+ K +N+LL+ + + D GLA
Sbjct: 145 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 175
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 26/166 (15%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-------HPN 469
+G G+ G+V A+ F K + + A L+E E + MS L+ H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTV--AVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 470 IVTLAGYCAEHGQRLLV-YEYVGNGNLHDMLH-----------FADDSSKN-LTWNARVR 516
+V L G C + G L+V E+ GNL L +D K+ LT +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 517 VALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ A+ +E+L +HR+ + NILL ++ + D GLA
Sbjct: 153 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 26/166 (15%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-------HPN 469
+G G+ G+V A+ F K + + A L+E E + MS L+ H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTV--AVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 470 IVTLAGYCAEHGQRLLVY-EYVGNGNLHDMLH-----------FADDSSKN-LTWNARVR 516
+V L G C + G L+V E+ GNL L +D K+ LT +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 517 VALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ A+ +E+L +HR+ + NILL ++ + D GLA
Sbjct: 144 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLA 186
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/154 (19%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
+ F + +G G+ G V++ ++ +K+ + + + + + + P
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH 529
IV G G+ + E++ G+L +L A + + +V++ + L YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 183
Query: 530 EVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563
E ++HR+ K +NIL++ L D G++
Sbjct: 184 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSG 215
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 10/112 (8%)
Query: 455 FLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNAR 514
L+ V+ + +L HPNI+ L + + LV E G L D + S+
Sbjct: 51 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM 110
Query: 515 VRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHL---SDCGLAA 563
+V GT YLH+ ++VHR+ K N+LL+ + L D GL+A
Sbjct: 111 KQVLSGTT----YLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSA 155
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 12/163 (7%)
Query: 417 LIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG 475
++G+G+ V+R G + A+K +N + L+ D + + +L H NIV L
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 476 YCAEHGQR--LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
E R +L+ E+ G+L+ +L ++ L + + V + +L E
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLE-EPSNAYGLPESEFLIVLRDVVGGMNHLRE--- 130
Query: 534 PSVVHRNFKSANILL----DDELNPHLSDCGLAALTPNTERQV 572
+VHRN K NI+ D + L+D G A + E+ V
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV 173
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 37/165 (22%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR 464
+ + F E + G+G+ G V E + G +A+KK+ E L+ + +++
Sbjct: 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE---LQIMQDLAV 75
Query: 465 LRHPNIVTLAGYCAEHGQRL-------LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRV 517
L HPNIV L Y G+R +V EYV D LH +N R +V
Sbjct: 76 LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP-----DTLH---RCCRNYY---RRQV 124
Query: 518 A----------LGTARALEYLHEVCLPS--VVHRNFKSANILLDD 550
A R++ LH LPS V HR+ K N+L+++
Sbjct: 125 APPPILIKVFLFQLIRSIGCLH---LPSVNVCHRDIKPHNVLVNE 166
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 73/174 (41%), Gaps = 22/174 (12%)
Query: 409 TNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH 467
++ F E +G G+ VYR + K A+K + ++ + + RL H
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSH 107
Query: 468 PNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEY 527
PNI+ L + LV E V G L D + S+ +A ++ A+ Y
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI----LEAVAY 163
Query: 528 LHEVCLPSVVHRNFKSANILL-----DDELNPHLSDCGLAALTPNTERQVITGT 576
LHE +VHR+ K N+L D L ++D GL+ + E QV+ T
Sbjct: 164 LHE---NGIVHRDLKPENLLYATPAPDAPLK--IADFGLSKI---VEHQVLMKT 209
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN 469
+ F + +G G+ G V++ ++ +K+ + + + + + + P
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH 529
IV G G+ + E++ G+L +L A + + +V++ + L YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 140
Query: 530 EVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVITGT 576
E ++HR+ K +NIL++ L D G++ ++ GT
Sbjct: 141 EK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 185
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/158 (18%), Positives = 67/158 (42%), Gaps = 6/158 (3%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL 465
+ + F + +G G+ G V++ ++ +K+ + + + + + +
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 64
Query: 466 RHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARAL 525
P IV G G+ + E++ G+L +L A + + +V++ + L
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGL 120
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563
YL E ++HR+ K +NIL++ L D G++
Sbjct: 121 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSG 156
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 73/172 (42%), Gaps = 10/172 (5%)
Query: 393 SPITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQ-- 450
+P+ + +T FL G+G + Y + K + K+ ++ L+
Sbjct: 10 APLKEIPDVLVDPRTMKRYMRGRFL-GKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH 68
Query: 451 EEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510
+++ ++ L +P++V G+ + +V E +L + LH K +T
Sbjct: 69 QKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LH---KRRKAVT 124
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
T + ++YLH V+HR+ K N+ L+D+++ + D GLA
Sbjct: 125 EPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 173
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 12/163 (7%)
Query: 417 LIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG 475
++G+G+ V+R G + A+K +N + L+ D + + +L H NIV L
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 476 YCAEHGQR--LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
E R +L+ E+ G+L+ +L ++ L + + V + +L E
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLE-EPSNAYGLPESEFLIVLRDVVGGMNHLRE--- 130
Query: 534 PSVVHRNFKSANILL----DDELNPHLSDCGLAALTPNTERQV 572
+VHRN K NI+ D + L+D G A + E+ V
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV 173
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 73/172 (42%), Gaps = 10/172 (5%)
Query: 393 SPITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQ-- 450
+P+ + +T FL G+G + Y + K + K+ ++ L+
Sbjct: 26 APLKEIPDVLVDPRTMKRYMRGRFL-GKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH 84
Query: 451 EEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510
+++ ++ L +P++V G+ + +V E +L + LH K +T
Sbjct: 85 QKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LH---KRRKAVT 140
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
T + ++YLH V+HR+ K N+ L+D+++ + D GLA
Sbjct: 141 EPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 418 IGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIV- 471
IGEG+ G V A K+ +A++KI S E + L + + R RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKI-----SPFEHQTYCQRTLREIKILLRFRHENIIG 89
Query: 472 ---TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+ E + + + + + +L+ +L +++L+ + R L+Y+
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLKYI 144
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
H +V+HR+ K +N+LL+ + + D GLA
Sbjct: 145 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 175
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 73/172 (42%), Gaps = 10/172 (5%)
Query: 393 SPITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQ-- 450
+P+ + +T FL G+G + Y + K + K+ ++ L+
Sbjct: 26 APLKEIPDVLVDPRTMKRYMRGRFL-GKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH 84
Query: 451 EEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510
+++ ++ L +P++V G+ + +V E +L + LH K +T
Sbjct: 85 QKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LH---KRRKAVT 140
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
T + ++YLH V+HR+ K N+ L+D+++ + D GLA
Sbjct: 141 EPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/158 (18%), Positives = 67/158 (42%), Gaps = 6/158 (3%)
Query: 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL 465
+ + F + +G G+ G V++ ++ +K+ + + + + + +
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 88
Query: 466 RHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARAL 525
P IV G G+ + E++ G+L +L A + + +V++ + L
Sbjct: 89 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGL 144
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563
YL E ++HR+ K +NIL++ L D G++
Sbjct: 145 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSG 180
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 73/172 (42%), Gaps = 10/172 (5%)
Query: 393 SPITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQ-- 450
+P+ + +T FL G+G + Y + K + K+ ++ L+
Sbjct: 26 APLKEIPDVLVDPRTMKRYMRGRFL-GKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH 84
Query: 451 EEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510
+++ ++ L +P++V G+ + +V E +L + LH K +T
Sbjct: 85 QKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LH---KRRKAVT 140
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
T + ++YLH V+HR+ K N+ L+D+++ + D GLA
Sbjct: 141 EPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 27/172 (15%)
Query: 417 LIGEGSLGRVYRAEFANGKIMAVKKIDNAALSL---QEEDNFLEAVSNMSRLRHPNIVTL 473
+G+G + + A+ K + KI +L L Q E +E +S L H ++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSME-ISIHRSLAHQHVVGF 104
Query: 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
G+ ++ +V E +L + LH + R AL A YL ++ L
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLE-LH-------------KRRKALTEPEARYYLRQIVL 150
Query: 534 PS-------VVHRNFKSANILLDDELNPHLSDCGLAALTP--NTERQVITGT 576
V+HR+ K N+ L+++L + D GLA ++V+ GT
Sbjct: 151 GCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 202
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 27/172 (15%)
Query: 417 LIGEGSLGRVYRAEFANGKIMAVKKIDNAALSL---QEEDNFLEAVSNMSRLRHPNIVTL 473
+G+G + + A+ K + KI +L L Q E +E +S L H ++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSME-ISIHRSLAHQHVVGF 106
Query: 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
G+ ++ +V E +L + LH + R AL A YL ++ L
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLE-LH-------------KRRKALTEPEARYYLRQIVL 152
Query: 534 PS-------VVHRNFKSANILLDDELNPHLSDCGLAALTP--NTERQVITGT 576
V+HR+ K N+ L+++L + D GLA ++V+ GT
Sbjct: 153 GCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 204
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 27/172 (15%)
Query: 417 LIGEGSLGRVYRAEFANGKIMAVKKIDNAALSL---QEEDNFLEAVSNMSRLRHPNIVTL 473
+G+G + + A+ K + KI +L L Q E +E +S L H ++V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSME-ISIHRSLAHQHVVGF 80
Query: 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
G+ ++ +V E +L ++ + R AL A YL ++ L
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSLLEL--------------HKRRKALTEPEARYYLRQIVL 126
Query: 534 PS-------VVHRNFKSANILLDDELNPHLSDCGLAALTP--NTERQVITGT 576
V+HR+ K N+ L+++L + D GLA ++V+ GT
Sbjct: 127 GCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 178
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 25/156 (16%)
Query: 417 LIGEGSLGRVYRAEFANGKIMAVKKIDNAALSL---QEEDNFLEAVSNMSRLRHPNIVTL 473
+G+G + + A+ K + KI +L L Q E +E +S L H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSME-ISIHRSLAHQHVVGF 82
Query: 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
G+ ++ +V E +L + LH + R AL A YL ++ L
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLE-LH-------------KRRKALTEPEARYYLRQIVL 128
Query: 534 PS-------VVHRNFKSANILLDDELNPHLSDCGLA 562
V+HR+ K N+ L+++L + D GLA
Sbjct: 129 GCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 110 RKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSI 169
++ D G S+ D++P +P + L+L S + + + L++LN+ N L
Sbjct: 17 KEVDCQGKSL-DSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLS 75
Query: 170 GDIFGNLAGLATLDLSFNNFS 190
+F +L L TL L+ N +
Sbjct: 76 AGVFDDLTELGTLGLANNQLA 96
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 25/156 (16%)
Query: 417 LIGEGSLGRVYRAEFANGKIMAVKKIDNAALSL---QEEDNFLEAVSNMSRLRHPNIVTL 473
+G+G + + A+ K + KI +L L Q E +E +S L H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSME-ISIHRSLAHQHVVGF 82
Query: 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
G+ ++ +V E +L + LH + R AL A YL ++ L
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLE-LH-------------KRRKALTEPEARYYLRQIVL 128
Query: 534 PS-------VVHRNFKSANILLDDELNPHLSDCGLA 562
V+HR+ K N+ L+++L + D GLA
Sbjct: 129 GCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 110 RKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSI 169
++ D G S+ D++P +P + L+L S + + + L++LN+ N L
Sbjct: 17 KEVDCQGKSL-DSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLS 75
Query: 170 GDIFGNLAGLATLDLSFNNFS 190
+F +L L TL L+ N +
Sbjct: 76 AGVFDDLTELGTLGLANNQLA 96
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 25/156 (16%)
Query: 417 LIGEGSLGRVYRAEFANGKIMAVKKIDNAALSL---QEEDNFLEAVSNMSRLRHPNIVTL 473
+G+G + + A+ K + KI +L L Q E +E +S L H ++V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSME-ISIHRSLAHQHVVGF 86
Query: 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
G+ ++ +V E +L + LH + R AL A YL ++ L
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSLLE-LH-------------KRRKALTEPEARYYLRQIVL 132
Query: 534 PS-------VVHRNFKSANILLDDELNPHLSDCGLA 562
V+HR+ K N+ L+++L + D GLA
Sbjct: 133 GCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 168
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 17/181 (9%)
Query: 392 KSPITATSYTVASLQTATN-------SFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDN 444
K+P T+ T++ N F+ ++G+GS G+V +E + KI
Sbjct: 316 KAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILK 375
Query: 445 AALSLQEEDNFLEAVSN--MSRLRHPNIVTLAGYCAEHGQRL-LVYEYVGNGNLHDMLHF 501
+ +Q++D V ++ P +T C + RL V EYV G+L M H
Sbjct: 376 KDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHI 433
Query: 502 ADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561
V A A L +L +++R+ K N++LD E + ++D G+
Sbjct: 434 Q--QVGRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGM 488
Query: 562 A 562
Sbjct: 489 C 489
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 23/112 (20%), Positives = 55/112 (49%), Gaps = 10/112 (8%)
Query: 453 DNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR--LLVYEYVGNGNLHDMLHFADDSSKNLT 510
+ + ++ + +L HPN+V L + + +V+E V G + ++ + K L+
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV-----PTLKPLS 135
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+ + +EYLH ++HR+ K +N+L+ ++ + ++D G++
Sbjct: 136 EDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVS 184
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 11/99 (11%)
Query: 454 NFLEAVSNMSRLRHPNIVTL--AGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNL 509
F N + L HP IV + G L +V EYV L D++H + +
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH----TEGPM 113
Query: 510 TWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL 548
T + V +AL + H+ ++HR+ K ANIL+
Sbjct: 114 TPKRAIEVIADACQALNFSHQN---GIIHRDVKPANILI 149
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 21/157 (13%)
Query: 417 LIGEGSLGRVYRAEF----ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472
++G G+ G VY+ + N KI K+ S + L+ M+ + P +
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 473 LAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD-----SSKNLTWNARVRVALGTARALEY 527
L G C +L V + + G L D H ++ S L W ++ A+ + Y
Sbjct: 84 LLGICLTSTVQL-VTQLMPYGCLLD--HVRENRGRLGSQDLLNWCMQI------AKGMSY 134
Query: 528 LHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564
L +V L VHR+ + N+L+ + ++D GLA L
Sbjct: 135 LEDVRL---VHRDLAARNVLVKSPNHVKITDFGLARL 168
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 81/198 (40%), Gaps = 11/198 (5%)
Query: 382 VAKSGSLKKIKSPITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKK 441
+ K+ ++ S T + L+ + +IG G+ G V + + + K
Sbjct: 41 LRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMK 100
Query: 442 IDNAALSLQEEDN--FLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDML 499
+ + ++ D+ F E M+ P +V L + +V EY+ G+L +++
Sbjct: 101 LLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM 160
Query: 500 HFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559
D K W AR A AL+ +H + +HR+ K N+LLD + L+D
Sbjct: 161 SNYDVPEK---W-ARFYTA-EVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 212
Query: 560 GLAALTPNTERQVITGTS 577
G + N E V T+
Sbjct: 213 G-TCMKMNKEGMVRCDTA 229
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 81/198 (40%), Gaps = 11/198 (5%)
Query: 382 VAKSGSLKKIKSPITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKK 441
+ K+ ++ S T + L+ + +IG G+ G V + + + K
Sbjct: 46 LRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMK 105
Query: 442 IDNAALSLQEEDN--FLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDML 499
+ + ++ D+ F E M+ P +V L + +V EY+ G+L +++
Sbjct: 106 LLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM 165
Query: 500 HFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559
D K W AR A AL+ +H + +HR+ K N+LLD + L+D
Sbjct: 166 SNYDVPEK---W-ARFYTA-EVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 217
Query: 560 GLAALTPNTERQVITGTS 577
G + N E V T+
Sbjct: 218 G-TCMKMNKEGMVRCDTA 234
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 11/108 (10%)
Query: 459 VSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVA 518
VS + ++ HPNI+TL +L+ E V G L D L + S+ + ++
Sbjct: 66 VSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 519 LGTARALEYLHEVCLPSVVHRNFKSANILLDDELNP----HLSDCGLA 562
G + YLH + H + K NI+L D+ P L D GLA
Sbjct: 126 DG----VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 16/110 (14%)
Query: 468 PNIVTLAGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARA 524
PNI+TLA + R LV+E+V N + + D +R + +A
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFYMYEILKA 143
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALT-PNTERQV 572
L+Y H + ++HR+ K N+L+D E L D GLA P E V
Sbjct: 144 LDYCHSM---GIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 80/196 (40%), Gaps = 11/196 (5%)
Query: 384 KSGSLKKIKSPITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKID 443
K+ ++ S T + L+ + +IG G+ G V + + + K+
Sbjct: 48 KNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLL 107
Query: 444 NAALSLQEEDN--FLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHF 501
+ ++ D+ F E M+ P +V L + +V EY+ G+L +++
Sbjct: 108 SKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN 167
Query: 502 ADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561
D K W AR A AL+ +H + +HR+ K N+LLD + L+D G
Sbjct: 168 YDVPEK---W-ARFYTA-EVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFG- 218
Query: 562 AALTPNTERQVITGTS 577
+ N E V T+
Sbjct: 219 TCMKMNKEGMVRCDTA 234
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 22/154 (14%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIV- 471
IGEG+ G V A + N +A+KKI S E + L + + RH NI+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI-----SPFEHQTYCQRTLREIKILLAFRHENIIG 87
Query: 472 ---TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+ E + + + + + +L+ +L +++L+ + R L+Y+
Sbjct: 88 INDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLKYI 142
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
H +V+HR+ K +N+LL+ + + D GLA
Sbjct: 143 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 173
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 15/115 (13%)
Query: 454 NFLEAVSNMSRLRHPNIVTLAGYCAEHGQR------LLVYEYVGNGNLHDMLHFADDSSK 507
F N + L HP IV + Y + +V EYV L D++H +
Sbjct: 58 RFRREAQNAAALNHPAIVAV--YATGEAETPAGPLPYIVMEYVDGVTLRDIVH----TEG 111
Query: 508 NLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+T + V +AL + H+ ++HR+ K ANI++ + D G+A
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 89 DISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP----PNLTSLNLASNNFSGN 144
++S + L+G L D+ + F SI Q P P L SL L N G+
Sbjct: 281 NVSAMSLAGVSIKYLEDVP--KHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMN--KGS 336
Query: 145 LPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLA--GLATLDLSFN 187
+ + ++ SLSYL++SRN+L+ S + +L L LDLSFN
Sbjct: 337 ISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFN 381
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 13/144 (9%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALS----LQEEDNFLEAVSNMSRLRHPNIV 471
+IG+G V R G+ AVK +D A + L ED EA S L+HP+IV
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREA-SICHMLKHPHIV 91
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARV--RVALGTARALEYLH 529
L + G +V+E++ +L + ++ V AL Y H
Sbjct: 92 ELLETYSSDGMLYMVFEFMDGADL--CFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 149
Query: 530 EVCLPSVVHRNFKSANILLDDELN 553
+ +++HR+ K +LL + N
Sbjct: 150 D---NNIIHRDVKPHCVLLASKEN 170
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 13/144 (9%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALS----LQEEDNFLEAVSNMSRLRHPNIV 471
+IG+G V R G+ AVK +D A + L ED EA S L+HP+IV
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREA-SICHMLKHPHIV 89
Query: 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARV--RVALGTARALEYLH 529
L + G +V+E++ +L + ++ V AL Y H
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADL--CFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 530 EVCLPSVVHRNFKSANILLDDELN 553
+ +++HR+ K +LL + N
Sbjct: 148 D---NNIIHRDVKPHCVLLASKEN 168
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 16/110 (14%)
Query: 468 PNIVTLAGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARA 524
PNI+TLA + R LV+E+V N + + D +R + +A
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFYMYEILKA 143
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALT-PNTERQV 572
L+Y H + ++HR+ K N+++D E L D GLA P E V
Sbjct: 144 LDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 89 DISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP----PNLTSLNLASNNFSGN 144
++S + L+G L D+ + F SI Q P P L SL L N G+
Sbjct: 286 NVSAMSLAGVSIKYLEDVP--KHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMN--KGS 341
Query: 145 LPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLA--GLATLDLSFN 187
+ + ++ SLSYL++SRN+L+ S + +L L LDLSFN
Sbjct: 342 ISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFN 386
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 11/98 (11%)
Query: 455 FLEAVSNMSRLRHPNIVTL--AGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLT 510
F N + L HP IV + G L +V EYV L D++H + +T
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH----TEGPMT 114
Query: 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL 548
+ V +AL + H+ ++HR+ K ANI++
Sbjct: 115 PKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMI 149
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 11/99 (11%)
Query: 454 NFLEAVSNMSRLRHPNIVTL--AGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNL 509
F N + L HP IV + G L +V EYV L D++H + +
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH----TEGPM 113
Query: 510 TWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL 548
T + V +AL + H+ ++HR+ K ANI++
Sbjct: 114 TPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMI 149
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 11/99 (11%)
Query: 454 NFLEAVSNMSRLRHPNIVTL--AGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNL 509
F N + L HP IV + G L +V EYV L D++H + +
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH----TEGPM 113
Query: 510 TWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL 548
T + V +AL + H+ ++HR+ K ANI++
Sbjct: 114 TPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMI 149
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 94/257 (36%), Gaps = 40/257 (15%)
Query: 325 FCIRKNRRKVSGARSSAGSFPVSTNNMNTEMHEQRVKSVAAVTDLTPPPAEKLVIERVAK 384
+C+++ S + +S + P + +T H QR TP PA I K
Sbjct: 248 YCLKEACPNSSASNASGAAAPTLPAHPSTLTHPQRRIDTLNSDGYTPEPAR---ITSPDK 304
Query: 385 SGSLKKIKSPITATSYTVASLQTAT------NSFSQEFLIGEGSLGRVYRAEFANGKIMA 438
+ S + L+ N + +G G+ G V + + M
Sbjct: 305 PRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYR----MR 360
Query: 439 VKKIDNAALSLQE------EDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGN 492
K+ID A L++ + + M +L +P IV L G C +LV E G
Sbjct: 361 KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEAL-MLVMEMAGG 419
Query: 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL-------PSVVHRNFKSAN 545
G LH L R + + E LH+V + + VHRN + N
Sbjct: 420 GPLHKFL-------------VGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARN 466
Query: 546 ILLDDELNPHLSDCGLA 562
+LL + +SD GL+
Sbjct: 467 VLLVNRHYAKISDFGLS 483
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 452 EDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDML----HFADDSSK 507
+D L + M +L +P IV + G C E +LV E G L+ L H D K
Sbjct: 414 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 469
Query: 508 NLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
N+ + + + ++YL E + VHR+ + N+LL + +SD GL+
Sbjct: 470 NI-----IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS 516
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 16/110 (14%)
Query: 468 PNIVTLAGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARA 524
PNI+TLA + R LV+E+V N + + D +R + +A
Sbjct: 97 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFYMYEILKA 148
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALT-PNTERQV 572
L+Y H + ++HR+ K N+++D E L D GLA P E V
Sbjct: 149 LDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 195
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 16/110 (14%)
Query: 468 PNIVTLAGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARA 524
PNI+TLA + R LV+E+V N + + + LT + +R + +A
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQL-------RQTLT-DYDIRFYMYEILKA 143
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALT-PNTERQV 572
L+Y H + ++HR+ K N+++D E L D GLA P E V
Sbjct: 144 LDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 16/110 (14%)
Query: 468 PNIVTLAGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARA 524
PNI+TLA + R LV+E+V N + + D +R + +A
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFYMYEILKA 143
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALT-PNTERQV 572
L+Y H + ++HR+ K N+++D E L D GLA P E V
Sbjct: 144 LDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 452 EDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDML----HFADDSSK 507
+D L + M +L +P IV + G C E +LV E G L+ L H D K
Sbjct: 56 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 111
Query: 508 NLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
N+ + + + ++YL E + VHR+ + N+LL + +SD GL+
Sbjct: 112 NI-----IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLS 158
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQ--------ILRGLKYI 137
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 138 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 171
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 16/110 (14%)
Query: 468 PNIVTLAGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARA 524
PNI+TLA + R LV+E+V N + + D +R + +A
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFYMYEILKA 143
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALT-PNTERQV 572
L+Y H + ++HR+ K N+++D E L D GLA P E V
Sbjct: 144 LDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 16/110 (14%)
Query: 468 PNIVTLAGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARA 524
PNI+TLA + R LV+E+V N + + D +R + +A
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFYMYEILKA 143
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALT-PNTERQV 572
L+Y H + ++HR+ K N+++D E L D GLA P E V
Sbjct: 144 LDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 16/110 (14%)
Query: 468 PNIVTLAGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARA 524
PNI+TLA + R LV+E+V N + + D +R + +A
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFYMYEILKA 143
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALT-PNTERQV 572
L+Y H + ++HR+ K N+++D E L D GLA P E V
Sbjct: 144 LDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 16/110 (14%)
Query: 468 PNIVTLAGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARA 524
PNI+TLA + R LV+E+V N + + D +R + +A
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFYMYEILKA 142
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALT-PNTERQV 572
L+Y H + ++HR+ K N+++D E L D GLA P E V
Sbjct: 143 LDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 189
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 452 EDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDML----HFADDSSK 507
+D L + M +L +P IV + G C E +LV E G L+ L H D K
Sbjct: 56 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 111
Query: 508 NLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
N+ + + + ++YL E + VHR+ + N+LL + +SD GL+
Sbjct: 112 NI-----IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLS 158
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 16/110 (14%)
Query: 468 PNIVTLAGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARA 524
PNI+TLA + R LV+E+V N + + D +R + +A
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFYMYEILKA 143
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALT-PNTERQV 572
L+Y H + ++HR+ K N+++D E L D GLA P E V
Sbjct: 144 LDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 452 EDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDML----HFADDSSK 507
+D L + M +L +P IV + G C E +LV E G L+ L H D K
Sbjct: 50 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 105
Query: 508 NLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
N+ + + + ++YL E + VHR+ + N+LL + +SD GL+
Sbjct: 106 NI-----IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLS 152
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 16/110 (14%)
Query: 468 PNIVTLAGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARA 524
PNI+TLA + R LV+E+V N + + D +R + +A
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFYMYEILKA 143
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALT-PNTERQV 572
L+Y H + ++HR+ K N+++D E L D GLA P E V
Sbjct: 144 LDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 137
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 138 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 171
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 452 EDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDML----HFADDSSK 507
+D L + M +L +P IV + G C E +LV E G L+ L H D K
Sbjct: 415 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 470
Query: 508 NLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
N+ + + + ++YL E + VHR+ + N+LL + +SD GL+
Sbjct: 471 NI-----IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS 517
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 16/110 (14%)
Query: 468 PNIVTLAGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARA 524
PNI+TLA + R LV+E+V N + + D +R + +A
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFYMYEILKA 143
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALT-PNTERQV 572
L+Y H + ++HR+ K N+++D E L D GLA P E V
Sbjct: 144 LDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 16/110 (14%)
Query: 468 PNIVTLAGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARA 524
PNI+TLA + R LV+E+V N + + D +R + +A
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFYMYEILKA 142
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALT-PNTERQV 572
L+Y H + ++HR+ K N+++D E L D GLA P E V
Sbjct: 143 LDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 189
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 16/110 (14%)
Query: 468 PNIVTLAGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARA 524
PNI+TLA + R LV+E+V N + + D +R + +A
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFYMYEILKA 143
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALT-PNTERQV 572
L+Y H + ++HR+ K N+++D E L D GLA P E V
Sbjct: 144 LDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 137
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 138 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 171
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 452 EDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDML----HFADDSSK 507
+D L + M +L +P IV + G C E +LV E G L+ L H D K
Sbjct: 52 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 107
Query: 508 NLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
N+ + + + ++YL E + VHR+ + N+LL + +SD GL+
Sbjct: 108 NI-----IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLS 154
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 16/110 (14%)
Query: 468 PNIVTLAGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVAL-GTARA 524
PNI+TLA + R LV+E+V N + + D +R + +A
Sbjct: 90 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFYMYEILKA 141
Query: 525 LEYLHEVCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALT-PNTERQV 572
L+Y H + ++HR+ K N+++D E L D GLA P E V
Sbjct: 142 LDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 188
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 452 EDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDML----HFADDSSK 507
+D L + M +L +P IV + G C E +LV E G L+ L H D K
Sbjct: 62 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 117
Query: 508 NLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
N+ + + + ++YL E + VHR+ + N+LL + +SD GL+
Sbjct: 118 NI-----IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLS 164
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 452 EDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDML----HFADDSSK 507
+D L + M +L +P IV + G C E +LV E G L+ L H D K
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 127
Query: 508 NLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
N+ + + + ++YL E + VHR+ + N+LL + +SD GL+
Sbjct: 128 NI-----IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLS 174
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 452 EDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDML----HFADDSSK 507
+D L + M +L +P IV + G C E +LV E G L+ L H D K
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 127
Query: 508 NLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
N+ + + + ++YL E + VHR+ + N+LL + +SD GL+
Sbjct: 128 NI-----IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLS 174
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 11/113 (9%)
Query: 454 NFLEAVSNMSRLRHPNIVTL--AGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNL 509
F N + L HP IV + G L +V EYV L D++H + +
Sbjct: 75 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH----TEGPM 130
Query: 510 TWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
T + V +AL + H+ ++HR+ K ANI++ + D G+A
Sbjct: 131 TPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 180
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 161
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 162 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 195
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 141
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 10/149 (6%)
Query: 417 LIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSN--MSRLRHPNIVTLA 474
++G+GS G+V +E + KI + +Q++D V ++ P +T
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 475 GYCAEHGQRL-LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533
C + RL V EYV G+L M H V A A L +L
Sbjct: 87 HSCFQTMDRLYFVMEYVNGGDL--MYHIQ--QVGRFKEPHAVFYAAEIAIGLFFLQS--- 139
Query: 534 PSVVHRNFKSANILLDDELNPHLSDCGLA 562
+++R+ K N++LD E + ++D G+
Sbjct: 140 KGIIYRDLKLDNVMLDSEGHIKIADFGMC 168
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 27/144 (18%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSL---QEED---NFLEAVSNMSRLRHPNI 470
+G G+ G V A E K +A+K I ++ +E D N + + +L HP I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVA------LGTARA 524
+ + + + +V E + G L D + N R++ A A
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFD----------KVVGNKRLKEATCKLYFYQMLLA 126
Query: 525 LEYLHEVCLPSVVHRNFKSANILL 548
++YLHE ++HR+ K N+LL
Sbjct: 127 VQYLHE---NGIIHRDLKPENVLL 147
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 27/144 (18%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSL---QEED---NFLEAVSNMSRLRHPNI 470
+G G+ G V A E K +A+K I ++ +E D N + + +L HP I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVA------LGTARA 524
+ + + + +V E + G L D + N R++ A A
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFD----------KVVGNKRLKEATCKLYFYQMLLA 126
Query: 525 LEYLHEVCLPSVVHRNFKSANILL 548
++YLHE ++HR+ K N+LL
Sbjct: 127 VQYLHE---NGIIHRDLKPENVLL 147
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 161
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 162 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 195
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Query: 103 LSDLLSLRKFDLSGNSIHDTIP---YQLPPNLTSLNLASNNFSGNLPYSI-ASMVSLSYL 158
L +L +L L+GN + ++P + NL L L N LP + + +L+YL
Sbjct: 81 LKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQS-LPDGVFDKLTNLTYL 138
Query: 159 NVSRNSLTQSIGDIFGNLAGLATLDLSFNNFS 190
N++ N L +F L L LDLS+N
Sbjct: 139 NLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ 170
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 452 EDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDML----HFADDSSK 507
+D L + M +L +P IV + G C E +LV E G L+ L H D K
Sbjct: 70 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 125
Query: 508 NLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
N+ + + + ++YL E + VHR+ + N+LL + +SD GL+
Sbjct: 126 NI-----IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLS 172
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 160
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 161 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 194
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 22/154 (14%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNF----LEAVSNMSRLRHPNIV- 471
IGEG+ G V A + N +A+KKI S E + L + + RH NI+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI-----SPFEHQTYCQRTLREIKILLAFRHENIIG 87
Query: 472 ---TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
+ E + + + + + +L+ +L +++L+ + R L+Y+
Sbjct: 88 INDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLKYI 142
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
H +V+HR+ K +N+LL+ + + D GLA
Sbjct: 143 HSA---NVLHRDLKPSNLLLNTTSDLKICDFGLA 173
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 27/144 (18%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSL---QEED---NFLEAVSNMSRLRHPNI 470
+G G+ G V A E K +A+K I ++ +E D N + + +L HP I
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR------A 524
+ + + + +V E + G L D + N R++ A A
Sbjct: 77 IKIKNF-FDAEDYYIVLELMEGGELFD----------KVVGNKRLKEATCKLYFYQMLLA 125
Query: 525 LEYLHEVCLPSVVHRNFKSANILL 548
++YLHE ++HR+ K N+LL
Sbjct: 126 VQYLHE---NGIIHRDLKPENVLL 146
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 27/144 (18%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSL---QEED---NFLEAVSNMSRLRHPNI 470
+G G+ G V A E K +A+K I ++ +E D N + + +L HP I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR------A 524
+ + + + +V E + G L D + N R++ A A
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFD----------KVVGNKRLKEATCKLYFYQMLLA 126
Query: 525 LEYLHEVCLPSVVHRNFKSANILL 548
++YLHE ++HR+ K N+LL
Sbjct: 127 VQYLHE---NGIIHRDLKPENVLL 147
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 141
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 141
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDAGLARHT 175
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
IG G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 146
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 147 HSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHT 180
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 141
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSL---QEEDNFLEAVSNMSRLRHPNIVT 472
LIG+GS G+V +A + + +A+K I N L Q E LE ++ IV
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVH 120
Query: 473 LAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
L + LV+E + NL+D+L + + + ++ N + A AL +L
Sbjct: 121 LKRHFMFRNHLCLVFEMLSY-NLYDLLR--NTNFRGVSLNLTRKFAQQMCTALLFLATPE 177
Query: 533 LPSVVHRNFKSANILL 548
L S++H + K NILL
Sbjct: 178 L-SIIHCDLKPENILL 192
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 27/144 (18%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSL---QEED---NFLEAVSNMSRLRHPNI 470
+G G+ G V A E K +A+K I ++ +E D N + + +L HP I
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVA------LGTARA 524
+ + + + +V E + G L D + N R++ A A
Sbjct: 84 IKIKNF-FDAEDYYIVLELMEGGELFD----------KVVGNKRLKEATCKLYFYQMLLA 132
Query: 525 LEYLHEVCLPSVVHRNFKSANILL 548
++YLHE ++HR+ K N+LL
Sbjct: 133 VQYLHE---NGIIHRDLKPENVLL 153
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 402 VASLQTATNSFSQEFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSL---QEEDNFLE 457
V + + + + + LIG+GS G+V +A + + +A+K I N L Q E LE
Sbjct: 27 VKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 86
Query: 458 AVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRV 517
++ IV L + LV+E + NL+D+L + + + ++ N +
Sbjct: 87 LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLR--NTNFRGVSLNLTRKF 143
Query: 518 ALGTARALEYLHEVCLPSVVHRNFKSANILL 548
A AL +L L S++H + K NILL
Sbjct: 144 AQQMCTALLFLATPEL-SIIHCDLKPENILL 173
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 151
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 152 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 185
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 153
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 154 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 187
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 88 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 139
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 140 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 173
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Query: 417 LIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSL---QEEDNFLEAVSNMSRLRHPNIVT 472
LIG+GS G+V +A + + +A+K I N L Q E LE ++ IV
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVH 120
Query: 473 LAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC 532
L + LV+E + NL+D+L + + + ++ N + A AL +L
Sbjct: 121 LKRHFMFRNHLCLVFEMLSY-NLYDLLR--NTNFRGVSLNLTRKFAQQMCTALLFLATPE 177
Query: 533 LPSVVHRNFKSANILL 548
L S++H + K NILL
Sbjct: 178 L-SIIHCDLKPENILL 192
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 137
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 138 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 171
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V + + +G +AVKK+ S+ + + ++H N++ L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 119 FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 170
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 171 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 204
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 160
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 161 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 194
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 153
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 154 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 187
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 138
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 139 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 172
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 161
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 162 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 195
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 153
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 154 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 187
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 141
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQ--------ILRGLKYI 141
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHT 175
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 143
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 144 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 177
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQ--------ILRGLKYI 141
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 20/159 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 164
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567
H ++HR+ K +N+ ++++ + D GLA T +
Sbjct: 165 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 200
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 141
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 152
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 153 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 186
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 164
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 165 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 198
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 20/159 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 148
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567
H ++HR+ K +N+ ++++ + D GLA T +
Sbjct: 149 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 141
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 138
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 139 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 172
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 143
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 144 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 177
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 20/159 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 148
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567
H ++HR+ K +N+ ++++ + D GLA T +
Sbjct: 149 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 141
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 152
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 153 HSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHT 186
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 20/159 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 148
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567
H ++HR+ K +N+ ++++ + D GLA T +
Sbjct: 149 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 141
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 141
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 141
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHT 175
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 148
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 149 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 182
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 141
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 146
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 147 HSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHT 180
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 146
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 147 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 180
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 89 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 140
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 141 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 174
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 141
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 141
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 146
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 147 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 180
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 143
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 144 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 177
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 147
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 148 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 181
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 147
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 148 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 181
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 66/164 (40%), Gaps = 14/164 (8%)
Query: 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEFANG-KIMAVKKIDN-AALSLQEEDNFLEAV 459
V ++ F +IG G+ G V + N K+ A+K ++ L E F E
Sbjct: 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREER 125
Query: 460 SNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDML-HFADDSSKNLT--WNARVR 516
+ I TL + LV +Y G+L +L F D + + + A +
Sbjct: 126 DVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMV 185
Query: 517 VALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560
+A+ + L Y VHR+ K NIL+D + L+D G
Sbjct: 186 IAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFG 220
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 11/97 (11%)
Query: 418 IGEGSLGRVYRAEFANG-------KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNI 470
IG+GS G V R N KIM KI ++ ++ + V M +L HPNI
Sbjct: 34 IGQGSYG-VVRVAIENQTRAIRAIKIMNKNKI--RQINPKDVERIKTEVRLMKKLHHPNI 90
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLH-FADDSS 506
L + LV E G+L D L+ F DDS+
Sbjct: 91 ARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDST 127
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 141
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDGGLARHT 175
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 141
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDRGLARHT 175
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 27/144 (18%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSL---QEED---NFLEAVSNMSRLRHPNI 470
+G G+ G V A E K +A++ I ++ +E D N + + +L HP I
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 216
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR------A 524
+ + + + +V E + G L D + N R++ A A
Sbjct: 217 IKIKNF-FDAEDYYIVLELMEGGELFD----------KVVGNKRLKEATCKLYFYQMLLA 265
Query: 525 LEYLHEVCLPSVVHRNFKSANILL 548
++YLHE ++HR+ K N+LL
Sbjct: 266 VQYLHE---NGIIHRDLKPENVLL 286
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 59/154 (38%), Gaps = 9/154 (5%)
Query: 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RH 467
SF + +G GS G V++ +G++ AVK+ + ++ L V + ++ +H
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH 116
Query: 468 PNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEY 527
P V L E G L E G + + W T AL +
Sbjct: 117 PCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWG----YLRDTLLALAH 172
Query: 528 LHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561
LH L VH + K ANI L L D GL
Sbjct: 173 LHSQGL---VHLDVKPANIFLGPRGRCKLGDFGL 203
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 143
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 144 HSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHT 177
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 27/144 (18%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSL---QEED---NFLEAVSNMSRLRHPNI 470
+G G+ G V A E K +A++ I ++ +E D N + + +L HP I
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR------A 524
+ + + + +V E + G L D + N R++ A A
Sbjct: 203 IKIKNF-FDAEDYYIVLELMEGGELFD----------KVVGNKRLKEATCKLYFYQMLLA 251
Query: 525 LEYLHEVCLPSVVHRNFKSANILL 548
++YLHE ++HR+ K N+LL
Sbjct: 252 VQYLHE---NGIIHRDLKPENVLL 272
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 147
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 148 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 181
>pdb|3ZYI|A Chain A, Netring2 In Complex With Ngl2
Length = 452
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 123 IPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATL 182
+P +P N LNL NN + + L L + RNS+ Q F LA L TL
Sbjct: 69 VPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTL 128
Query: 183 DLSFNNF 189
+L F+N+
Sbjct: 129 EL-FDNW 134
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 14/109 (12%)
Query: 468 PNIVTLAGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARAL 525
PNIV L + + L++EYV N + + D ++ R + +AL
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTD------YDIRYYI-YELLKAL 139
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALT-PNTERQV 572
+Y H ++HR+ K N+++D EL L D GLA P E V
Sbjct: 140 DYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 185
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 14/109 (12%)
Query: 468 PNIVTLAGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARAL 525
PNIV L + + L++EYV N + + D ++ R + +AL
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTD------YDIRYYI-YELLKAL 140
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALT-PNTERQV 572
+Y H ++HR+ K N+++D EL L D GLA P E V
Sbjct: 141 DYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 186
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 147
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + D GLA T
Sbjct: 148 HSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHT 181
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 14/109 (12%)
Query: 468 PNIVTLAGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARAL 525
PNIV L + + L++EYV N + + D ++ R + +AL
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTD------YDIRYYI-YELLKAL 139
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALT-PNTERQV 572
+Y H ++HR+ K N+++D EL L D GLA P E V
Sbjct: 140 DYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 185
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 14/109 (12%)
Query: 468 PNIVTLAGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARAL 525
PNIV L + + L++EYV N + + D ++ R + +AL
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTD------YDIRYYI-YELLKAL 138
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALT-PNTERQV 572
+Y H ++HR+ K N+++D EL L D GLA P E V
Sbjct: 139 DYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 184
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 14/109 (12%)
Query: 468 PNIVTLAGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARAL 525
PNIV L + + L++EYV N + + D ++ R + +AL
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTD------YDIRYYI-YELLKAL 138
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALT-PNTERQV 572
+Y H ++HR+ K N+++D EL L D GLA P E V
Sbjct: 139 DYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 184
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 14/109 (12%)
Query: 468 PNIVTLAGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARAL 525
PNIV L + + L++EYV N + + D ++ R + +AL
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTD------YDIRYYI-YELLKAL 138
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALT-PNTERQV 572
+Y H ++HR+ K N+++D EL L D GLA P E V
Sbjct: 139 DYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 184
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 14/109 (12%)
Query: 468 PNIVTLAGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARAL 525
PNIV L + + L++EYV N + + D ++ R + +AL
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTD------YDIRYYI-YELLKAL 138
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALT-PNTERQV 572
+Y H ++HR+ K N+++D EL L D GLA P E V
Sbjct: 139 DYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 184
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 14/109 (12%)
Query: 468 PNIVTLAGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARAL 525
PNIV L + + L++EYV N + + D ++ R + +AL
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTD------YDIRYYI-YELLKAL 159
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALT-PNTERQV 572
+Y H ++HR+ K N+++D EL L D GLA P E V
Sbjct: 160 DYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 205
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 14/109 (12%)
Query: 468 PNIVTLAGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARAL 525
PNIV L + + L++EYV N + + D ++ R + +AL
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTD------YDIRYYI-YELLKAL 138
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALT-PNTERQV 572
+Y H ++HR+ K N+++D EL L D GLA P E V
Sbjct: 139 DYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 184
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 14/109 (12%)
Query: 468 PNIVTLAGYCAEHGQRL--LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARAL 525
PNIV L + + L++EYV N + + D ++ R + +AL
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTD------YDIRYYI-YELLKAL 138
Query: 526 EYLHEVCLPSVVHRNFKSANILLDDELNP-HLSDCGLAALT-PNTERQV 572
+Y H ++HR+ K N+++D EL L D GLA P E V
Sbjct: 139 DYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 184
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Query: 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGN---SIHDTIPYQLPPNLTSLNLAS 138
G + S+ I+ L+ + L+ LR +LS N +I ++ ++L L + L
Sbjct: 223 GLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELL-RLQEIQLVG 281
Query: 139 NNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGD 192
+ PY+ + L LNVS N LT +F ++ L TL L N + D
Sbjct: 282 GQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACD 335
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 101 YLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSL---NLASNNFSGNLPYSIAS-MVSLS 156
Y L L L +L N D IP ++ +L L +L NN + LP S+ + VSL
Sbjct: 540 YFLKGLSHLHILNLESNGF-DEIPVEVFKDLFELKIIDLGLNNLN-TLPASVFNNQVSLK 597
Query: 157 YLNVSRNSLTQSIGDIFG-NLAGLATLDLSFNNF 189
LN+ +N +T +FG L LD+ FN F
Sbjct: 598 SLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPF 631
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 101 YLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSL---NLASNNFSGNLPYSIAS-MVSLS 156
Y L L L +L N D IP ++ +L L +L NN + LP S+ + VSL
Sbjct: 530 YFLKGLSHLHILNLESNGF-DEIPVEVFKDLFELKIIDLGLNNLNT-LPASVFNNQVSLK 587
Query: 157 YLNVSRNSLTQSIGDIFG-NLAGLATLDLSFNNF 189
LN+ +N +T +FG L LD+ FN F
Sbjct: 588 SLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPF 621
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 101 YLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSL---NLASNNFSGNLPYSIAS-MVSLS 156
Y L L L +L N D IP ++ +L L +L NN LP S+ + VSL
Sbjct: 535 YFLKGLSHLHILNLESNGF-DEIPVEVFKDLFELKIIDLGLNNL-NTLPASVFNNQVSLK 592
Query: 157 YLNVSRNSLTQSIGDIFG-NLAGLATLDLSFNNF 189
LN+ +N +T +FG L LD+ FN F
Sbjct: 593 SLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPF 626
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 17/147 (11%)
Query: 420 EGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE 479
E S G Y A+F K+ A+ + VS + ++ H N++TL
Sbjct: 33 EKSTGLEYAAKFIK------KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN 86
Query: 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHR 539
+L+ E V G L D L + S+ + ++ G + YLH + H
Sbjct: 87 RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG----VNYLH---TKKIAHF 139
Query: 540 NFKSANILLDDELNP----HLSDCGLA 562
+ K NI+L D+ P L D GLA
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 123 IPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATL 182
+P +P ++T L L N F+ +P +++ L+ +++S N ++ F N+ L TL
Sbjct: 25 LPKGIPRDVTELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTL 83
Query: 183 DLSFNNF 189
LS+N
Sbjct: 84 ILSYNRL 90
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 17/147 (11%)
Query: 420 EGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE 479
E S G Y A+F K+ A+ + VS + ++ H N++TL
Sbjct: 33 EKSTGLEYAAKFIK------KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN 86
Query: 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHR 539
+L+ E V G L D L + S+ + ++ G + YLH + H
Sbjct: 87 RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG----VNYLH---TKKIAHF 139
Query: 540 NFKSANILLDDELNP----HLSDCGLA 562
+ K NI+L D+ P L D GLA
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 17/147 (11%)
Query: 420 EGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE 479
E S G Y A+F K+ A+ + VS + ++ H N++TL
Sbjct: 33 EKSTGLEYAAKFIK------KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN 86
Query: 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHR 539
+L+ E V G L D L + S+ + ++ G + YLH + H
Sbjct: 87 RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG----VNYLH---TKKIAHF 139
Query: 540 NFKSANILLDDELNP----HLSDCGLA 562
+ K NI+L D+ P L D GLA
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 24/123 (19%)
Query: 66 NEGDPCGESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPY 125
N DP ++KG+ E S V + D+S + + + S L + L+ N I+
Sbjct: 260 NFKDPDNFTFKGL--EASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEIN----- 312
Query: 126 QLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLS 185
+ N F G + L LN+S+N L +F NL L LDLS
Sbjct: 313 ---------KIDDNAFWG--------LTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLS 355
Query: 186 FNN 188
+N+
Sbjct: 356 YNH 358
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 18/157 (11%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH--PNIVTLAG 475
IG G +V++ +I A+K ++ Q D++ ++ +++L+ I+ L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFA---DDSSKNLTWNARVRVALGTARALEYLHEVC 532
Y +V E GN +L+ L D + W LE +H +
Sbjct: 96 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWK----------NMLEAVHTIH 144
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNT 568
+VH + K AN L+ D + L D G+A + P+T
Sbjct: 145 QHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDT 180
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 65/162 (40%), Gaps = 18/162 (11%)
Query: 420 EGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE 479
E S G Y A+F K+ A+ + VS + ++ H N++TL
Sbjct: 33 EKSTGLEYAAKFIK------KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN 86
Query: 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHR 539
+L+ E V G L D L + S+ + ++ G + YLH + H
Sbjct: 87 RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG----VNYLH---TKKIAHF 139
Query: 540 NFKSANILLDDELNP----HLSDCGLA-ALTPNTERQVITGT 576
+ K NI+L D+ P L D GLA + E + I GT
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 17/147 (11%)
Query: 420 EGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE 479
E S G Y A+F K+ A+ + VS + ++ H N++TL
Sbjct: 33 EKSTGLEYAAKFIK------KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN 86
Query: 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHR 539
+L+ E V G L D L + S+ + ++ G + YLH + H
Sbjct: 87 RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG----VNYLH---TKKIAHF 139
Query: 540 NFKSANILLDDELNP----HLSDCGLA 562
+ K NI+L D+ P L D GLA
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 16/152 (10%)
Query: 418 IGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A A + +AVKK+ SL + + L+H N++ L
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 474 ---AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE 530
A + + LV +G +L++++ S +++ + + R L+Y+H
Sbjct: 88 FTPATSIEDFSEVYLVTTLMG-ADLNNIVKCQALSDEHVQF-----LVYQLLRGLKYIHS 141
Query: 531 VCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
++HR+ K +N+ ++++ + D GLA
Sbjct: 142 A---GIIHRDLKPSNVAVNEDCELRILDFGLA 170
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 18/157 (11%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH--PNIVTLAG 475
IG G +V++ +I A+K ++ Q D++ ++ +++L+ I+ L
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFA---DDSSKNLTWNARVRVALGTARALEYLHEVC 532
Y +V E GN +L+ L D + W LE +H +
Sbjct: 80 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWK----------NMLEAVHTIH 128
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNT 568
+VH + K AN L+ D + L D G+A + P+T
Sbjct: 129 QHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDT 164
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 18/157 (11%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH--PNIVTLAG 475
IG G +V++ +I A+K ++ Q D++ ++ +++L+ I+ L
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFA---DDSSKNLTWNARVRVALGTARALEYLHEVC 532
Y +V E GN +L+ L D + W LE +H +
Sbjct: 76 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWK----------NMLEAVHTIH 124
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNT 568
+VH + K AN L+ D + L D G+A + P+T
Sbjct: 125 QHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDT 160
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 31/71 (43%)
Query: 120 HDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGL 179
H ++P +P N L L N + P S+++L L + N L +F +L L
Sbjct: 31 HASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQL 90
Query: 180 ATLDLSFNNFS 190
LDL N +
Sbjct: 91 TVLDLGTNQLT 101
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 18/157 (11%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH--PNIVTLAG 475
IG G +V++ +I A+K ++ Q D++ ++ +++L+ I+ L
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFA---DDSSKNLTWNARVRVALGTARALEYLHEVC 532
Y +V E GN +L+ L D + W LE +H +
Sbjct: 77 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYW----------KNMLEAVHTIH 125
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNT 568
+VH + K AN L+ D + L D G+A + P+T
Sbjct: 126 QHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDT 161
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 122 TIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLAT 181
TIP LPP+LT L+L N + S+ + +L+ L +S NS++ N L
Sbjct: 185 TIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRE 244
Query: 182 LDLSFNNF 189
L L+ N
Sbjct: 245 LHLNNNKL 252
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 122 TIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLAT 181
TIP LPP+LT L+L N + S+ + +L+ L +S NS++ N L
Sbjct: 185 TIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRE 244
Query: 182 LDLSFNNF 189
L L+ N
Sbjct: 245 LHLNNNKL 252
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 418 IGEGSLGRVYRA------EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNI 470
+G G+ G+V +A + + +AVK + A + E + + ++ + H N+
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGA-TASEYKALMTELKILTHIGHHLNV 93
Query: 471 VTLAGYCAEHGQRLLV-YEYVGNGNLHDMLHFADD 504
V L G C + G L+V EY GNL + L D
Sbjct: 94 VNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRD 128
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 18/157 (11%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH--PNIVTLAG 475
IG G +V++ +I A+K ++ Q D++ ++ +++L+ I+ L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFA---DDSSKNLTWNARVRVALGTARALEYLHEVC 532
Y +V E GN +L+ L D + W LE +H +
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWK----------NMLEAVHTIH 172
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNT 568
+VH + K AN L+ D + L D G+A + P+T
Sbjct: 173 QHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDT 208
>pdb|3TWI|D Chain D, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|E Chain E, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|F Chain F, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
Length = 179
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 30/68 (44%)
Query: 122 TIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLAT 181
++P +P L+L N + P S+ L+YLN++ N LT +F L L
Sbjct: 33 SVPAGIPTTTQVLHLYINQITKLEPGVFDSLTQLTYLNLAVNQLTALPVGVFDKLTKLTH 92
Query: 182 LDLSFNNF 189
L L N
Sbjct: 93 LALHINQL 100
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 18/157 (11%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH--PNIVTLAG 475
IG G +V++ +I A+K ++ Q D++ ++ +++L+ I+ L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFA---DDSSKNLTWNARVRVALGTARALEYLHEVC 532
Y +V E GN +L+ L D + W LE +H +
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWK----------NMLEAVHTIH 172
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNT 568
+VH + K AN L+ D + L D G+A + P+T
Sbjct: 173 QHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDT 208
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 18/157 (11%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH--PNIVTLAG 475
IG G +V++ +I A+K ++ Q D++ ++ +++L+ I+ L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFA---DDSSKNLTWNARVRVALGTARALEYLHEVC 532
Y +V E GN +L+ L D + W LE +H +
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWK----------NMLEAVHTIH 172
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA-ALTPNT 568
+VH + K AN L+ D + L D G+A + P+T
Sbjct: 173 QHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDT 208
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 63/157 (40%), Gaps = 20/157 (12%)
Query: 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A + G +AVKK+ S+ + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 474 ---AGYCAEHGQRLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL 528
A E LV +G N+ DD + L + R L+Y+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 141
Query: 529 HEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565
H ++HR+ K +N+ ++++ + GLA T
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILGFGLARHT 175
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 16/152 (10%)
Query: 418 IGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A A + +AVKK+ SL + + L+H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 474 ---AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE 530
A + + LV +G +L++++ S +++ + + R L+Y+H
Sbjct: 96 FTPATSIEDFSEVYLVTTLMG-ADLNNIVKCQALSDEHVQF-----LVYQLLRGLKYIHS 149
Query: 531 VCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
++HR+ K +N+ ++++ + D GLA
Sbjct: 150 A---GIIHRDLKPSNVAVNEDSELRILDFGLA 178
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 108 SLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQ 167
S+ +LS N + ++ LPP + L+L NN ++P + + +L LNV+ N L
Sbjct: 429 SILVLNLSSNMLTGSVFRCLPPKVKVLDL-HNNRIMSIPKDVTHLQALQELNVASNQLKS 487
Query: 168 SIGDIFGNLAGLATLDLSFN 187
+F L L + L N
Sbjct: 488 VPDGVFDRLTSLQYIWLHDN 507
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 22/155 (14%)
Query: 418 IGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL--- 473
+G G+ G V A A + +AVKK+ SL + + L+H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 474 ---AGYCAEHGQRLLVYEYVGNGNLHDMLH---FADDSSKNLTWNARVRVALGTARALEY 527
A + + LV +G +L++++ +D+ + L + R L+Y
Sbjct: 96 FTPATSIEDFSEVYLVTTLMG-ADLNNIVKSQALSDEHVQFLVYQ--------LLRGLKY 146
Query: 528 LHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+H ++HR+ K +N+ ++++ + D GLA
Sbjct: 147 IHSA---GIIHRDLKPSNVAVNEDSELRILDFGLA 178
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 26/145 (17%)
Query: 435 KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL---------- 484
K +A+KKI Q + L + + RL H NIV + G +L
Sbjct: 37 KRVAIKKI--VLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTEL 94
Query: 485 ----LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRN 540
+V EY+ +L ++L + L +AR+ R L+Y+H +V+HR+
Sbjct: 95 NSVYIVQEYM-ETDLANVL----EQGPLLEEHARL-FMYQLLRGLKYIHSA---NVLHRD 145
Query: 541 FKSANILLDDE-LNPHLSDCGLAAL 564
K AN+ ++ E L + D GLA +
Sbjct: 146 LKPANLFINTEDLVLKIGDFGLARI 170
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 78/202 (38%), Gaps = 38/202 (18%)
Query: 370 TPPPAEKLVIERVAKSGSLKKIKSPITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRA 429
+PPPA +SG ++ +T T++ V ++ +G G+ G V A
Sbjct: 3 SPPPA---------RSGFYRQ---EVTKTAWEVRAVYRDLQP------VGSGAYGAVCSA 44
Query: 430 -EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCA------EHGQ 482
+ G +A+KK+ S + + +RH N++ L +
Sbjct: 45 VDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104
Query: 483 RLLVYEYVGN--GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRN 540
LV ++G G L +D + L + + L Y+H ++HR+
Sbjct: 105 FYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQ--------MLKGLRYIHAA---GIIHRD 153
Query: 541 FKSANILLDDELNPHLSDCGLA 562
K N+ ++++ + D GLA
Sbjct: 154 LKPGNLAVNEDCELKILDFGLA 175
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 62/150 (41%), Gaps = 17/150 (11%)
Query: 418 IGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH--PNIVTLAG 475
IG G +V++ +I A+K ++ Q D++ ++ +++L+ I+ L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 476 YCAEHGQRLLVYEYVGNGNLHDMLHFA---DDSSKNLTWNARVRVALGTARALEYLHEVC 532
Y +V E GN +L+ L D + W LE +H +
Sbjct: 96 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWK----------NMLEAVHTIH 144
Query: 533 LPSVVHRNFKSANILLDDELNPHLSDCGLA 562
+VH + K AN L+ D + L D G+A
Sbjct: 145 QHGIVHSDLKPANFLIVDGM-LKLIDFGIA 173
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 108 SLRKFDLSGNSIHDTI--PYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSL 165
+L + DLS N++HD + P+L L+L NN P S + +L YL++ R
Sbjct: 249 NLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFT 308
Query: 166 TQSIG 170
QS+
Sbjct: 309 KQSVS 313
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 9/109 (8%)
Query: 85 VVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPP------NLTSLNLAS 138
++ +DIS + + L SL ++GNS + LP NLT L+L+
Sbjct: 423 LIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF---LPDIFTELRNLTFLDLSQ 479
Query: 139 NNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFN 187
P + S+ SL LN++ N L IF L L + L N
Sbjct: 480 CQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTN 528
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 28.5 bits (62), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-------HPN 469
+G G+ G+V A+ F K + + A L+E E + MS L+ H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTV--AVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 470 IVTLAGYCAEHGQRLLV-YEYVGNGNL 495
+V L G C + G L+V E+ GNL
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNL 119
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 28.5 bits (62), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-------HPN 469
+G G+ G+V A+ F K + + A L+E E + MS L+ H N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTV--AVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 470 IVTLAGYCAEHGQRLLV-YEYVGNGNL 495
+V L G C + G L+V E+ GNL
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNL 121
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.132 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,175,000
Number of Sequences: 62578
Number of extensions: 512644
Number of successful extensions: 3013
Number of sequences better than 100.0: 941
Number of HSP's better than 100.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 544
Number of HSP's that attempted gapping in prelim test: 1820
Number of HSP's gapped (non-prelim): 1099
length of query: 577
length of database: 14,973,337
effective HSP length: 104
effective length of query: 473
effective length of database: 8,465,225
effective search space: 4004051425
effective search space used: 4004051425
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)