Query 008121
Match_columns 577
No_of_seqs 610 out of 4614
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 18:37:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008121.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008121hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9d_A Serine/threonine-protei 100.0 4.5E-36 1.5E-40 305.3 15.0 163 410-577 24-189 (350)
2 3omv_A RAF proto-oncogene seri 100.0 1.9E-35 6.4E-40 296.4 16.4 160 409-577 35-198 (307)
3 3fpq_A Serine/threonine-protei 100.0 1.8E-35 6.2E-40 294.3 16.2 160 413-577 29-194 (290)
4 4asz_A BDNF/NT-3 growth factor 100.0 1.1E-35 3.7E-40 298.0 14.6 155 410-569 13-182 (299)
5 4aoj_A High affinity nerve gro 100.0 3.9E-35 1.3E-39 297.9 15.8 155 410-569 41-212 (329)
6 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.1E-35 7E-40 295.5 13.3 161 410-577 32-198 (311)
7 4gt4_A Tyrosine-protein kinase 100.0 4.3E-35 1.5E-39 294.9 14.4 154 412-569 28-199 (308)
8 4fih_A Serine/threonine-protei 100.0 5.9E-35 2E-39 296.6 14.0 158 410-577 74-234 (346)
9 3ubd_A Ribosomal protein S6 ki 100.0 2.5E-35 8.5E-40 294.8 8.9 161 410-577 24-190 (304)
10 3hyh_A Carbon catabolite-derep 100.0 3.3E-34 1.1E-38 282.8 15.6 160 410-577 13-175 (275)
11 4fie_A Serine/threonine-protei 100.0 3E-34 1E-38 298.5 15.1 159 409-577 150-311 (423)
12 3hmm_A TGF-beta receptor type- 100.0 7.2E-34 2.4E-38 286.3 16.1 150 411-569 4-162 (303)
13 1ogq_A PGIP-2, polygalacturona 100.0 8.9E-34 3E-38 287.6 16.0 219 38-257 2-234 (313)
14 4g3f_A NF-kappa-beta-inducing 100.0 4.5E-34 1.5E-38 289.2 13.3 154 410-577 58-220 (336)
15 4g31_A Eukaryotic translation 100.0 2E-33 6.9E-38 281.8 15.7 154 410-568 5-171 (299)
16 4ase_A Vascular endothelial gr 100.0 4.8E-33 1.7E-37 284.9 13.2 161 406-570 60-240 (353)
17 4b99_A Mitogen-activated prote 100.0 9.1E-32 3.1E-36 280.1 16.6 160 410-577 54-226 (398)
18 3v5w_A G-protein coupled recep 100.0 1.7E-31 5.7E-36 290.3 15.9 161 410-577 189-354 (689)
19 4f9c_A Cell division cycle 7-r 100.0 2.1E-30 7.2E-35 266.9 15.5 148 407-568 18-171 (361)
20 3uto_A Twitchin; kinase, muscl 100.0 8.3E-30 2.8E-34 278.1 16.9 160 410-577 157-320 (573)
21 4ecn_A Leucine-rich repeat pro 100.0 9.6E-30 3.3E-34 288.5 11.4 215 37-257 264-608 (876)
22 3rgz_A Protein brassinosteroid 100.0 4.2E-29 1.5E-33 283.5 15.9 217 36-257 6-260 (768)
23 3fe3_A MAP/microtubule affinit 100.0 1.2E-28 4.2E-33 251.3 16.4 162 409-577 14-177 (328)
24 3uim_A Brassinosteroid insensi 100.0 1.1E-28 3.8E-33 251.3 15.6 172 397-569 17-188 (326)
25 4eco_A Uncharacterized protein 100.0 3.4E-29 1.2E-33 278.2 10.7 214 39-257 27-366 (636)
26 4aw2_A Serine/threonine-protei 100.0 2.6E-28 8.8E-33 257.9 13.6 170 402-577 66-240 (437)
27 3s95_A LIMK-1, LIM domain kina 100.0 1.5E-27 5E-32 241.3 18.4 151 410-568 10-161 (310)
28 2qkw_B Protein kinase; three-h 100.0 4.8E-28 1.7E-32 246.1 14.9 161 401-566 30-190 (321)
29 3v8s_A RHO-associated protein 99.9 3E-28 1E-32 255.4 11.5 167 403-577 62-233 (410)
30 1o6l_A RAC-beta serine/threoni 99.9 8.4E-28 2.9E-32 245.9 14.4 161 410-577 5-169 (337)
31 3p86_A Serine/threonine-protei 99.9 1.5E-27 5.2E-32 241.2 15.3 156 408-568 35-192 (309)
32 2vd5_A DMPK protein; serine/th 99.9 5.8E-28 2E-32 253.4 12.5 171 401-577 52-227 (412)
33 3zgw_A Maternal embryonic leuc 99.9 1.1E-27 3.7E-32 246.0 14.0 160 409-576 9-172 (347)
34 1fot_A TPK1 delta, CAMP-depend 99.9 1.9E-27 6.6E-32 241.4 15.6 160 410-577 6-167 (318)
35 3txo_A PKC-L, NPKC-ETA, protei 99.9 1.1E-27 3.8E-32 246.6 14.0 162 409-577 22-188 (353)
36 4fr4_A YANK1, serine/threonine 99.9 1.7E-27 5.8E-32 247.6 15.4 161 410-577 15-178 (384)
37 4fcg_A Uncharacterized protein 99.9 2.3E-28 7.9E-33 249.3 8.5 215 37-257 22-266 (328)
38 2c30_A Serine/threonine-protei 99.9 3.9E-27 1.3E-31 239.5 17.5 167 400-576 25-204 (321)
39 3niz_A Rhodanese family protei 99.9 3E-27 1E-31 239.2 16.3 152 409-567 20-171 (311)
40 3fxz_A Serine/threonine-protei 99.9 3.9E-27 1.3E-31 236.8 16.8 158 409-576 19-179 (297)
41 4dc2_A Protein kinase C IOTA t 99.9 1.5E-27 5E-32 248.9 14.1 162 409-577 51-217 (396)
42 2psq_A Fibroblast growth facto 99.9 4.4E-27 1.5E-31 244.0 17.4 156 409-568 80-256 (370)
43 3qd2_B Eukaryotic translation 99.9 3.9E-27 1.3E-31 240.0 16.8 155 409-568 5-217 (332)
44 3kul_A Ephrin type-A receptor 99.9 3.5E-27 1.2E-31 240.3 16.3 153 409-568 48-204 (325)
45 3a8x_A Protein kinase C IOTA t 99.9 3.5E-27 1.2E-31 242.3 16.3 161 410-577 9-174 (345)
46 2bdw_A Hypothetical protein K1 99.9 4.6E-27 1.6E-31 243.0 17.2 162 409-577 28-194 (362)
47 2yab_A Death-associated protei 99.9 4.7E-27 1.6E-31 242.6 16.9 162 409-577 11-182 (361)
48 1xjd_A Protein kinase C, theta 99.9 2.3E-27 7.8E-32 243.4 14.3 164 407-577 14-182 (345)
49 4hcu_A Tyrosine-protein kinase 99.9 2.9E-27 1E-31 233.9 14.3 150 410-568 10-159 (269)
50 3c0i_A Peripheral plasma membr 99.9 3E-27 1E-31 243.4 14.6 166 409-577 23-197 (351)
51 1tki_A Titin; serine kinase, m 99.9 9.2E-27 3.2E-31 236.8 17.7 160 409-577 4-167 (321)
52 2qol_A Ephrin receptor; recept 99.9 3.7E-27 1.3E-31 244.8 15.1 153 409-568 44-200 (373)
53 4eqm_A Protein kinase; transfe 99.9 5.2E-27 1.8E-31 235.5 15.7 153 409-568 10-164 (294)
54 1rdq_E PKA C-alpha, CAMP-depen 99.9 3.1E-27 1.1E-31 243.1 14.3 160 410-577 41-202 (350)
55 3tki_A Serine/threonine-protei 99.9 2.8E-27 9.6E-32 240.8 13.7 150 409-566 6-156 (323)
56 3e7e_A HBUB1, BUB1A, mitotic c 99.9 3.4E-27 1.2E-31 244.4 14.6 151 408-566 63-234 (365)
57 3soa_A Calcium/calmodulin-depe 99.9 5.3E-27 1.8E-31 248.7 15.7 163 408-577 9-177 (444)
58 3o0g_A Cell division protein k 99.9 1E-26 3.4E-31 233.1 16.6 151 410-567 2-153 (292)
59 3sxs_A Cytoplasmic tyrosine-pr 99.9 4.8E-27 1.7E-31 232.2 14.1 154 409-571 7-160 (268)
60 3a62_A Ribosomal protein S6 ki 99.9 4.2E-27 1.4E-31 240.0 14.0 162 409-577 16-185 (327)
61 2i0e_A Protein kinase C-beta I 99.9 4.1E-27 1.4E-31 242.3 14.1 163 408-577 18-185 (353)
62 3cbl_A C-FES, proto-oncogene t 99.9 2.3E-27 8E-32 246.8 12.3 153 409-568 113-266 (377)
63 3h4j_B AMPK kdaid, SNF1-like p 99.9 4.2E-27 1.4E-31 240.5 13.3 160 410-577 9-171 (336)
64 1ob3_A PFPK5, cell division co 99.9 4.8E-27 1.7E-31 234.9 13.4 150 410-566 2-151 (288)
65 2y94_A 5'-AMP-activated protei 99.9 9.2E-27 3.1E-31 248.6 16.3 161 410-577 16-179 (476)
66 2y0a_A Death-associated protei 99.9 1.3E-26 4.5E-31 236.2 16.7 161 410-577 11-181 (326)
67 2zv2_A Calcium/calmodulin-depe 99.9 8.9E-27 3.1E-31 234.1 15.1 152 409-568 12-190 (298)
68 2r5t_A Serine/threonine-protei 99.9 6.9E-27 2.3E-31 242.4 14.5 162 409-577 37-203 (373)
69 3c4z_A Rhodopsin kinase; Ser/T 99.9 1.2E-26 4E-31 250.8 16.7 166 409-577 184-353 (543)
70 3gen_A Tyrosine-protein kinase 99.9 6.7E-27 2.3E-31 233.1 13.7 151 409-568 23-173 (283)
71 1x8b_A WEE1HU, WEE1-like prote 99.9 1.2E-26 4.1E-31 231.3 15.4 157 409-568 10-187 (289)
72 2nru_A Interleukin-1 receptor- 99.9 4E-26 1.4E-30 230.2 19.1 166 397-567 12-185 (307)
73 2acx_A G protein-coupled recep 99.9 1.1E-26 3.8E-31 251.7 15.9 165 408-577 182-349 (576)
74 3soc_A Activin receptor type-2 99.9 1.1E-26 3.7E-31 236.4 14.9 151 409-568 23-184 (322)
75 1opk_A P150, C-ABL, proto-onco 99.9 7E-27 2.4E-31 251.8 14.1 153 409-569 219-372 (495)
76 3p1a_A MYT1 kinase, membrane-a 99.9 8.3E-27 2.9E-31 236.0 13.9 160 410-576 57-219 (311)
77 1luf_A Muscle-specific tyrosin 99.9 1.1E-26 3.7E-31 238.2 14.4 157 406-566 43-225 (343)
78 3rp9_A Mitogen-activated prote 99.9 1.1E-26 3.8E-31 248.0 14.9 149 410-566 53-207 (458)
79 3gni_B Strad alpha; kinase fol 99.9 2.4E-26 8.1E-31 240.2 16.9 152 409-565 24-178 (389)
80 1qcf_A Haematopoetic cell kina 99.9 5.4E-27 1.9E-31 250.0 11.7 152 408-568 186-337 (454)
81 4agu_A Cyclin-dependent kinase 99.9 2.6E-26 8.9E-31 232.1 15.9 151 410-567 3-154 (311)
82 4euu_A Serine/threonine-protei 99.9 2.6E-26 9E-31 233.1 16.0 163 409-576 8-178 (319)
83 3tt0_A Basic fibroblast growth 99.9 2.3E-26 7.8E-31 239.7 15.8 155 409-567 68-243 (382)
84 3vhe_A Vascular endothelial gr 99.9 8.3E-27 2.8E-31 240.6 12.3 163 402-568 14-246 (359)
85 1t4h_A Serine/threonine-protei 99.9 3.4E-26 1.2E-30 228.9 16.3 160 411-577 27-194 (290)
86 2vuw_A Serine/threonine-protei 99.9 7E-28 2.4E-32 246.6 4.1 150 409-567 19-234 (336)
87 3q4u_A Activin receptor type-1 99.9 3.1E-26 1.1E-30 230.2 16.0 147 409-569 7-167 (301)
88 4ejn_A RAC-alpha serine/threon 99.9 6.2E-27 2.1E-31 249.1 11.4 162 409-577 147-313 (446)
89 3uc3_A Serine/threonine-protei 99.9 1.6E-26 5.4E-31 239.0 14.0 158 409-576 19-180 (361)
90 1kob_A Twitchin; kinase, intra 99.9 4.9E-26 1.7E-30 237.1 17.8 161 409-577 50-214 (387)
91 2ivs_A Proto-oncogene tyrosine 99.9 2.8E-26 9.6E-31 231.9 15.5 156 409-568 22-203 (314)
92 3ugc_A Tyrosine-protein kinase 99.9 9.4E-27 3.2E-31 233.6 11.8 152 409-568 9-167 (295)
93 3fdn_A Serine/threonine-protei 99.9 1.8E-26 6.1E-31 229.6 13.6 161 409-576 8-170 (279)
94 3n9x_A Phosphotransferase; mal 99.9 2.6E-26 9E-31 243.2 15.6 152 409-568 25-182 (432)
95 3lb7_A RAF proto-oncogene seri 99.9 5.4E-26 1.8E-30 229.6 17.1 149 409-566 35-183 (307)
96 3ork_A Serine/threonine protei 99.9 8.6E-27 2.9E-31 235.9 11.1 152 409-567 11-168 (311)
97 3is5_A Calcium-dependent prote 99.9 2E-26 7E-31 230.1 13.7 156 410-569 22-181 (285)
98 3l9p_A Anaplastic lymphoma kin 99.9 1.1E-26 3.6E-31 240.9 12.0 153 409-565 70-234 (367)
99 2pmi_A Negative RE, cyclin-dep 99.9 3.9E-26 1.3E-30 231.8 15.8 153 409-566 4-159 (317)
100 3qup_A Tyrosine-protein kinase 99.9 2.4E-26 8.3E-31 233.6 13.9 158 407-567 20-189 (323)
101 3kk8_A Calcium/calmodulin depe 99.9 5.7E-26 2E-30 226.4 16.2 161 409-576 5-170 (284)
102 2x4f_A Myosin light chain kina 99.9 3.6E-26 1.2E-30 237.3 15.1 157 413-577 92-252 (373)
103 3dls_A PAS domain-containing s 99.9 1.9E-26 6.7E-31 235.8 12.8 162 408-576 22-192 (335)
104 3dbq_A Dual specificity protei 99.9 2.6E-26 9E-31 235.6 13.8 152 409-569 8-161 (343)
105 1k9a_A Carboxyl-terminal SRC k 99.9 4E-26 1.4E-30 243.0 15.7 148 409-566 192-340 (450)
106 3kmu_A ILK, integrin-linked ki 99.9 5.5E-26 1.9E-30 224.6 15.3 150 410-565 10-163 (271)
107 2w4o_A Calcium/calmodulin-depe 99.9 3.6E-26 1.2E-30 235.2 14.1 158 408-576 51-213 (349)
108 1fmk_A C-SRC, P60-SRC, tyrosin 99.9 1.2E-26 4.1E-31 247.2 10.9 151 409-568 183-333 (452)
109 3dtc_A Mitogen-activated prote 99.9 3.3E-26 1.1E-30 226.5 13.3 162 409-576 6-177 (271)
110 1t46_A HOMO sapiens V-KIT hard 99.9 4.7E-26 1.6E-30 230.2 14.4 158 409-570 22-200 (313)
111 2eue_A Carbon catabolite derep 99.9 8.5E-26 2.9E-30 224.2 15.7 151 410-568 13-165 (275)
112 3f3z_A Calcium/calmodulin-depe 99.9 6.9E-26 2.4E-30 225.0 15.1 159 409-576 8-171 (277)
113 1u5q_A Serine/threonine protei 99.9 4.7E-26 1.6E-30 234.2 14.2 151 410-567 54-206 (348)
114 2vgo_A Serine/threonine-protei 99.9 5.5E-26 1.9E-30 226.6 14.3 160 410-576 14-175 (284)
115 2w5a_A Serine/threonine-protei 99.9 3.2E-26 1.1E-30 227.6 12.4 157 409-568 5-169 (279)
116 2izr_A Casein kinase I isoform 99.9 6.7E-26 2.3E-30 231.3 15.1 149 410-569 9-164 (330)
117 3lij_A Calcium/calmodulin depe 99.9 4.9E-26 1.7E-30 245.3 14.8 162 409-577 36-202 (494)
118 4aaa_A Cyclin-dependent kinase 99.9 8.2E-26 2.8E-30 230.7 15.6 151 410-567 25-176 (331)
119 2rku_A Serine/threonine-protei 99.9 1.3E-25 4.4E-30 225.1 16.8 151 409-566 14-166 (294)
120 3t9t_A Tyrosine-protein kinase 99.9 4.4E-26 1.5E-30 225.0 13.1 149 410-567 8-156 (267)
121 2zmd_A Dual specificity protei 99.9 5.8E-26 2E-30 237.2 14.7 150 410-568 56-207 (390)
122 3eqc_A Dual specificity mitoge 99.9 3.6E-26 1.2E-30 236.2 12.8 161 409-576 32-193 (360)
123 2owb_A Serine/threonine-protei 99.9 1.1E-25 3.9E-30 230.1 16.4 151 409-566 40-192 (335)
124 4eut_A Serine/threonine-protei 99.9 6.8E-26 2.3E-30 237.3 15.0 164 409-577 8-179 (396)
125 3cok_A Serine/threonine-protei 99.9 9.4E-26 3.2E-30 224.1 15.2 152 410-567 11-164 (278)
126 1rjb_A FL cytokine receptor; k 99.9 4.5E-26 1.6E-30 233.8 13.2 157 408-568 43-225 (344)
127 1vzo_A Ribosomal protein S6 ki 99.9 1.8E-26 6E-31 238.1 10.0 152 409-567 53-211 (355)
128 3kfa_A Tyrosine-protein kinase 99.9 5.8E-26 2E-30 226.8 13.3 154 408-569 11-165 (288)
129 3pfq_A PKC-B, PKC-beta, protei 99.9 6.1E-26 2.1E-30 252.7 15.0 163 408-577 339-506 (674)
130 2pvf_A Fibroblast growth facto 99.9 1.5E-25 5.1E-30 229.1 16.7 156 409-568 34-210 (334)
131 3mwu_A Calmodulin-domain prote 99.9 4.6E-26 1.6E-30 245.1 13.3 161 409-576 21-186 (486)
132 3oz6_A Mitogen-activated prote 99.9 1.2E-25 4E-30 234.8 16.0 150 408-566 7-160 (388)
133 2h8h_A Proto-oncogene tyrosine 99.9 1.7E-26 5.8E-31 251.0 10.0 151 409-568 266-416 (535)
134 3fme_A Dual specificity mitoge 99.9 6.7E-26 2.3E-30 226.5 13.5 158 409-569 6-164 (290)
135 3i6u_A CDS1, serine/threonine- 99.9 1E-25 3.6E-30 237.5 15.6 163 407-577 132-305 (419)
136 3kn6_A Ribosomal protein S6 ki 99.9 1.3E-25 4.5E-30 228.7 15.8 142 415-568 16-162 (325)
137 2wqm_A Serine/threonine-protei 99.9 1.7E-25 5.7E-30 226.1 16.5 155 410-567 32-188 (310)
138 3hko_A Calcium/calmodulin-depe 99.9 3.5E-26 1.2E-30 234.6 11.7 160 404-566 20-221 (345)
139 2a2a_A Death-associated protei 99.9 1.1E-25 3.8E-30 228.7 15.2 161 409-576 11-181 (321)
140 2pml_X PFPK7, Ser/Thr protein 99.9 4.5E-26 1.5E-30 234.1 12.4 162 409-576 30-213 (348)
141 2yex_A Serine/threonine-protei 99.9 1.3E-25 4.6E-30 222.6 15.4 150 409-566 6-156 (276)
142 4f0f_A Serine/threonine-protei 99.9 2.3E-25 7.8E-30 222.4 17.1 151 409-567 18-181 (287)
143 1qpc_A LCK kinase; alpha beta 99.9 6.1E-26 2.1E-30 225.6 12.8 152 409-569 12-163 (279)
144 3ttj_A Mitogen-activated prote 99.9 1E-25 3.5E-30 240.4 15.4 159 409-577 61-227 (464)
145 3brb_A Proto-oncogene tyrosine 99.9 1.3E-25 4.6E-30 227.1 15.4 158 407-567 31-199 (313)
146 1p4o_A Insulin-like growth fac 99.9 7.3E-26 2.5E-30 229.9 13.4 158 406-567 21-190 (322)
147 4e5w_A Tyrosine-protein kinase 99.9 9.2E-26 3.2E-30 226.9 14.0 153 410-569 21-180 (302)
148 3q5i_A Protein kinase; CDPK, m 99.9 1.4E-25 4.8E-30 242.4 16.4 162 409-577 35-212 (504)
149 1mp8_A Focal adhesion kinase 1 99.9 8E-26 2.7E-30 225.2 13.2 152 409-568 14-169 (281)
150 3llt_A Serine/threonine kinase 99.9 1.3E-25 4.3E-30 232.0 15.0 165 402-576 27-222 (360)
151 3g33_A Cell division protein k 99.9 2.2E-25 7.4E-30 225.1 16.3 164 408-577 7-183 (308)
152 1cm8_A Phosphorylated MAP kina 99.9 8.4E-26 2.9E-30 234.1 13.4 150 409-567 24-180 (367)
153 3og7_A AKAP9-BRAF fusion prote 99.9 9.6E-26 3.3E-30 225.6 13.4 149 409-566 23-171 (289)
154 3gbz_A Kinase, CMGC CDK; ssgci 99.9 6.4E-26 2.2E-30 231.4 12.4 152 407-566 31-188 (329)
155 2buj_A Serine/threonine-protei 99.9 1.6E-25 5.4E-30 226.9 15.0 153 408-565 27-184 (317)
156 3mi9_A Cell division protein k 99.9 1.9E-25 6.4E-30 229.9 15.7 150 410-566 17-175 (351)
157 3lxl_A Tyrosine-protein kinase 99.9 1.4E-25 4.7E-30 228.6 14.2 153 409-569 22-181 (327)
158 3lxp_A Non-receptor tyrosine-p 99.9 3.6E-25 1.2E-29 224.7 17.2 148 412-568 33-187 (318)
159 4fvq_A Tyrosine-protein kinase 99.9 9.3E-26 3.2E-30 225.4 12.7 151 409-567 7-173 (289)
160 3gxj_A TGF-beta receptor type- 99.9 2.4E-26 8.4E-31 231.1 8.3 145 410-568 3-161 (303)
161 2jam_A Calcium/calmodulin-depe 99.9 1.2E-25 4E-30 226.6 13.2 159 409-576 8-170 (304)
162 3nyv_A Calmodulin-domain prote 99.9 9E-26 3.1E-30 242.7 13.1 161 409-576 25-191 (484)
163 4fl3_A Tyrosine-protein kinase 99.9 9.1E-26 3.1E-30 249.6 13.5 146 416-569 375-523 (635)
164 3poz_A Epidermal growth factor 99.9 8E-26 2.8E-30 230.4 12.0 152 409-568 14-170 (327)
165 3mdy_A Bone morphogenetic prot 99.9 2.7E-25 9.3E-30 227.0 16.0 153 406-569 33-196 (337)
166 3c1x_A Hepatocyte growth facto 99.9 1.1E-25 3.8E-30 233.5 13.2 150 411-567 90-244 (373)
167 1xbb_A Tyrosine-protein kinase 99.9 1.8E-25 6E-30 223.9 14.2 152 410-569 16-171 (291)
168 2y7j_A Phosphorylase B kinase 99.9 3E-25 1E-29 229.8 16.2 166 405-577 89-263 (365)
169 3bhy_A Death-associated protei 99.9 2E-25 7E-30 222.2 14.5 151 410-567 5-164 (283)
170 2h6d_A 5'-AMP-activated protei 99.9 1.6E-25 5.6E-30 222.1 13.6 152 410-568 11-164 (276)
171 1mqb_A Ephrin type-A receptor 99.9 2.1E-25 7.2E-30 228.0 14.7 151 410-567 44-199 (333)
172 1zy4_A Serine/threonine-protei 99.9 2.3E-25 7.9E-30 223.7 14.8 149 409-566 5-167 (303)
173 3an0_A Dual specificity mitoge 99.9 1.5E-25 5E-30 229.7 13.1 157 408-568 49-207 (340)
174 3f66_A Hepatocyte growth facto 99.9 2.4E-25 8.2E-30 223.5 14.4 152 410-568 25-181 (298)
175 3kex_A Receptor tyrosine-prote 99.9 7.7E-26 2.6E-30 230.3 10.8 152 410-569 13-169 (325)
176 3pg1_A Mitogen-activated prote 99.9 1.6E-25 5.3E-30 231.5 13.3 160 401-567 13-186 (362)
177 2r3i_A Cell division protein k 99.9 2.5E-25 8.7E-30 223.4 14.4 151 410-566 3-154 (299)
178 3pls_A Macrophage-stimulating 99.9 2.8E-25 9.7E-30 222.8 14.7 150 411-567 22-176 (298)
179 2qr7_A Ribosomal protein S6 ki 99.9 2.8E-25 9.5E-30 227.8 14.9 156 409-577 21-184 (342)
180 3a7i_A MST3 kinase, serine/thr 99.9 5.9E-25 2E-29 221.3 17.0 151 409-568 21-172 (303)
181 3lm5_A Serine/threonine-protei 99.9 2E-25 6.7E-30 227.5 13.5 167 405-576 23-196 (327)
182 2a19_B Interferon-induced, dou 99.9 2E-25 6.7E-30 222.3 13.2 149 409-568 10-175 (284)
183 1u59_A Tyrosine-protein kinase 99.9 5.5E-25 1.9E-29 219.8 16.5 150 411-568 10-163 (287)
184 2xir_A Vascular endothelial gr 99.9 1.6E-25 5.5E-30 226.6 12.7 161 404-568 21-201 (316)
185 3eb0_A Putative uncharacterize 99.9 2.3E-25 7.8E-30 232.2 14.1 154 406-569 3-196 (383)
186 2h34_A Serine/threonine-protei 99.9 3.6E-25 1.2E-29 223.7 15.1 153 409-568 33-187 (309)
187 1nxk_A MAP kinase-activated pr 99.9 2.8E-25 9.6E-30 232.7 14.6 155 411-577 62-227 (400)
188 3uqc_A Probable conserved tran 99.9 5.1E-25 1.8E-29 220.1 15.8 145 410-563 31-177 (286)
189 2ac3_A MAP kinase-interacting 99.9 3.8E-25 1.3E-29 224.0 15.0 148 410-566 12-165 (316)
190 1ua2_A CAK, cell division prot 99.9 2.3E-25 8E-30 228.8 13.6 153 408-567 8-164 (346)
191 2ozo_A Tyrosine-protein kinase 99.9 2.5E-25 8.6E-30 245.4 14.8 144 417-568 343-489 (613)
192 3op5_A Serine/threonine-protei 99.9 1.5E-25 5E-30 232.0 12.1 153 408-567 33-206 (364)
193 3byv_A Rhoptry kinase; malaria 99.9 4.7E-26 1.6E-30 236.9 8.4 154 409-566 72-257 (377)
194 1fvr_A Tyrosine-protein kinase 99.9 3.6E-25 1.2E-29 225.5 14.8 152 410-565 25-192 (327)
195 2i1m_A Macrophage colony-stimu 99.9 1E-25 3.5E-30 230.0 10.7 156 409-568 45-217 (333)
196 1b6c_B TGF-B superfamily recep 99.9 7E-25 2.4E-29 224.6 16.5 150 405-568 37-200 (342)
197 1phk_A Phosphorylase kinase; g 99.9 6E-25 2.1E-29 220.5 15.6 153 409-568 16-177 (298)
198 2ycf_A Serine/threonine-protei 99.9 3.4E-25 1.2E-29 225.2 13.8 152 409-568 9-170 (322)
199 2w1i_A JAK2; chromosomal rearr 99.9 4.6E-25 1.6E-29 224.7 14.6 153 409-569 40-199 (326)
200 3mtl_A Cell division protein k 99.9 9.8E-26 3.4E-30 229.5 9.6 149 410-566 2-151 (324)
201 2xrw_A Mitogen-activated prote 99.9 5.4E-25 1.9E-29 228.4 15.3 150 409-568 24-180 (371)
202 2fst_X Mitogen-activated prote 99.9 2.4E-25 8.2E-30 230.5 12.4 150 409-567 28-184 (367)
203 1csn_A Casein kinase-1; phosph 99.9 7.3E-25 2.5E-29 219.8 14.7 149 409-568 9-164 (298)
204 2eva_A TAK1 kinase - TAB1 chim 99.9 4.1E-25 1.4E-29 223.1 12.6 150 410-567 8-158 (307)
205 2x7f_A TRAF2 and NCK-interacti 99.9 1.7E-25 5.8E-30 227.6 9.9 156 404-567 18-181 (326)
206 2vwi_A Serine/threonine-protei 99.9 2.6E-25 8.8E-30 223.6 11.1 155 408-566 13-172 (303)
207 2clq_A Mitogen-activated prote 99.9 2.1E-24 7.2E-29 216.1 17.6 151 411-567 23-175 (295)
208 4azs_A Methyltransferase WBDD; 99.9 2E-25 6.9E-30 243.4 10.6 149 418-576 242-402 (569)
209 2yfx_A Tyrosine-protein kinase 99.9 6.1E-25 2.1E-29 223.8 13.3 153 409-565 29-193 (327)
210 3cc6_A Protein tyrosine kinase 99.9 8.2E-25 2.8E-29 217.8 13.6 152 409-568 11-166 (281)
211 3g2f_A Bone morphogenetic prot 99.9 7E-25 2.4E-29 224.0 13.4 148 409-567 12-172 (336)
212 2wtk_C Serine/threonine-protei 99.9 1.9E-24 6.6E-29 217.6 16.4 152 409-566 4-160 (305)
213 3nsz_A CK II alpha, casein kin 99.9 1.8E-24 6.2E-29 220.4 16.4 144 410-568 36-184 (330)
214 2pzi_A Probable serine/threoni 99.9 8.2E-25 2.8E-29 244.8 14.6 155 410-577 80-241 (681)
215 3com_A Serine/threonine-protei 99.9 1.1E-24 3.9E-29 220.3 14.3 151 408-568 27-178 (314)
216 3qyz_A Mitogen-activated prote 99.9 1.3E-24 4.3E-29 225.0 14.9 150 409-568 26-181 (364)
217 1blx_A Cyclin-dependent kinase 99.9 7E-25 2.4E-29 223.0 12.7 154 408-567 9-172 (326)
218 4exu_A Mitogen-activated prote 99.9 1E-24 3.6E-29 226.2 14.2 149 409-567 41-196 (371)
219 2wei_A Calmodulin-domain prote 99.9 1.2E-24 4E-29 217.4 13.9 152 409-567 21-176 (287)
220 2j7t_A Serine/threonine-protei 99.9 7.8E-25 2.7E-29 220.1 12.6 149 408-564 17-166 (302)
221 3lzb_A Epidermal growth factor 99.9 6.8E-25 2.3E-29 223.6 12.2 152 409-568 14-170 (327)
222 2o6s_A Variable lymphocyte rec 99.9 1.1E-24 3.7E-29 207.0 12.5 175 69-248 3-190 (208)
223 2v62_A Serine/threonine-protei 99.9 9.1E-25 3.1E-29 224.3 12.8 150 409-566 36-204 (345)
224 1j1b_A Glycogen synthase kinas 99.9 1E-24 3.5E-29 230.0 13.2 157 410-576 54-219 (420)
225 1byg_A CSK, protein (C-termina 99.9 4.9E-25 1.7E-29 219.0 10.1 149 409-567 20-169 (278)
226 3rgz_A Protein brassinosteroid 99.9 9E-25 3.1E-29 248.0 13.5 109 152-260 631-743 (768)
227 2i6l_A Mitogen-activated prote 99.9 2.3E-24 7.8E-29 218.3 15.1 147 409-566 10-172 (320)
228 2b9h_A MAP kinase FUS3, mitoge 99.9 1.9E-24 6.4E-29 222.4 14.6 149 409-567 10-164 (353)
229 3ll6_A Cyclin G-associated kin 99.9 1.5E-24 5.2E-29 221.2 13.7 152 409-567 27-190 (337)
230 2iwi_A Serine/threonine-protei 99.9 3.2E-25 1.1E-29 224.2 8.4 163 407-576 28-201 (312)
231 3coi_A Mitogen-activated prote 99.9 1.5E-24 5.2E-29 223.3 13.3 148 410-567 24-178 (353)
232 2o6q_A Variable lymphocyte rec 99.9 9.3E-24 3.2E-28 209.1 18.4 175 84-259 38-220 (270)
233 3cek_A Dual specificity protei 99.9 5.2E-25 1.8E-29 222.8 9.6 154 406-568 24-179 (313)
234 3kvw_A DYRK2, dual specificity 99.9 3.9E-24 1.3E-28 226.2 16.5 158 409-576 96-262 (429)
235 4e7w_A Glycogen synthase kinas 99.9 1.3E-24 4.6E-29 227.2 12.8 150 410-569 40-196 (394)
236 3q60_A ROP5B; pseudokinase, tr 99.9 1E-24 3.4E-29 226.3 11.4 151 410-568 62-247 (371)
237 2jii_A Serine/threonine-protei 99.9 4.8E-25 1.6E-29 227.0 8.7 145 410-567 42-213 (352)
238 3a99_A Proto-oncogene serine/t 99.9 7.6E-25 2.6E-29 222.5 10.0 163 407-576 40-211 (320)
239 3m2w_A MAP kinase-activated pr 99.9 3.3E-24 1.1E-28 215.5 14.6 147 410-568 17-173 (299)
240 3e3p_A Protein kinase, putativ 99.9 2.4E-24 8.3E-29 222.2 13.6 166 404-576 17-194 (360)
241 2y4i_B KSR2, HKSR2, kinase sup 99.9 3.1E-25 1E-29 224.9 6.7 150 407-565 30-179 (319)
242 3rgf_A Cyclin-dependent kinase 99.9 1.9E-24 6.6E-29 226.9 12.9 145 415-567 26-184 (405)
243 3fhr_A MAP kinase-activated pr 99.9 4.1E-24 1.4E-28 218.7 14.8 157 409-576 27-192 (336)
244 1u46_A ACK-1, activated CDC42 99.9 1.7E-24 5.8E-29 216.3 11.5 154 409-569 17-175 (291)
245 2j0j_A Focal adhesion kinase 1 99.9 3.7E-24 1.3E-28 237.7 14.7 153 408-568 388-544 (656)
246 1z57_A Dual specificity protei 99.9 6.2E-24 2.1E-28 216.8 15.2 158 409-576 13-197 (339)
247 4hgt_A Casein kinase I isoform 99.9 5.4E-24 1.8E-28 213.2 13.2 150 408-568 7-161 (296)
248 3aln_A Dual specificity mitoge 99.9 5E-24 1.7E-28 216.9 13.1 156 409-568 21-179 (327)
249 3m19_A Variable lymphocyte rec 99.9 1.6E-23 5.5E-28 205.1 16.2 182 74-259 6-194 (251)
250 3sv0_A Casein kinase I-like; t 99.9 1.3E-23 4.4E-28 224.7 16.4 150 409-569 6-160 (483)
251 3uzp_A CKI-delta, CKID, casein 99.9 1.1E-23 3.7E-28 211.0 14.9 150 409-569 8-162 (296)
252 1wak_A Serine/threonine-protei 99.9 7.7E-24 2.6E-28 221.2 13.8 136 409-552 36-184 (397)
253 1ogq_A PGIP-2, polygalacturona 99.9 3.6E-24 1.2E-28 216.8 10.4 134 83-217 76-213 (313)
254 2dyl_A Dual specificity mitoge 99.9 1E-23 3.5E-28 213.5 13.3 152 409-567 24-177 (318)
255 2rio_A Serine/threonine-protei 99.9 5.7E-24 1.9E-28 225.3 11.6 149 411-568 16-181 (434)
256 3p23_A Serine/threonine-protei 99.9 1.7E-23 5.8E-28 221.2 12.5 148 409-568 23-176 (432)
257 2eu9_A Dual specificity protei 99.9 3.9E-23 1.3E-27 212.3 14.9 158 409-576 18-202 (355)
258 2vx3_A Dual specificity tyrosi 99.9 4.8E-23 1.6E-27 214.6 15.5 161 408-576 52-221 (382)
259 1ozn_A Reticulon 4 receptor; N 99.9 1.8E-22 6.2E-27 201.4 18.4 176 83-258 32-215 (285)
260 3qa8_A MGC80376 protein; kinas 99.9 1.2E-23 4.3E-28 230.2 10.1 155 410-569 14-178 (676)
261 3m19_A Variable lymphocyte rec 99.9 1.7E-22 5.7E-27 197.8 16.5 165 74-238 15-194 (251)
262 3en9_A Glycoprotease, O-sialog 99.9 1.4E-23 5E-28 227.5 9.7 139 413-569 339-483 (540)
263 1p9a_G Platelet glycoprotein I 99.9 3.1E-22 1.1E-26 200.2 18.6 175 83-259 31-210 (290)
264 2z62_A TOLL-like receptor 4, v 99.9 2E-22 6.8E-27 200.1 16.7 190 69-258 1-214 (276)
265 2z66_A Variable lymphocyte rec 99.9 1.4E-22 4.9E-27 204.2 15.9 191 69-259 3-238 (306)
266 1q8y_A SR protein kinase; tran 99.9 4.4E-23 1.5E-27 213.8 11.8 151 409-567 18-190 (373)
267 1zar_A RIO2 kinase; serine kin 99.9 6.7E-23 2.3E-27 204.0 12.4 146 404-568 84-245 (282)
268 1ozn_A Reticulon 4 receptor; N 99.9 7.3E-22 2.5E-26 197.0 16.4 177 83-259 56-240 (285)
269 4fcg_A Uncharacterized protein 99.9 4E-22 1.4E-26 203.1 13.0 173 82-258 103-291 (328)
270 3zyi_A Leucine-rich repeat-con 99.9 3.9E-21 1.3E-25 204.7 17.4 188 70-258 49-256 (452)
271 3dzo_A Rhoptry kinase domain; 99.9 3.6E-22 1.2E-26 210.1 9.1 155 409-567 77-263 (413)
272 2v9t_B SLIT homolog 2 protein 99.9 2.7E-21 9.4E-26 185.2 13.6 156 69-237 7-166 (220)
273 3rfs_A Internalin B, repeat mo 99.9 1.1E-20 3.9E-25 187.1 18.5 174 83-258 41-219 (272)
274 2v70_A SLIT-2, SLIT homolog 2 99.9 2.6E-21 8.7E-26 185.4 13.1 151 87-240 15-170 (220)
275 3j0a_A TOLL-like receptor 5; m 99.9 6.1E-21 2.1E-25 218.7 17.9 178 83-260 290-563 (844)
276 2xwt_C Thyrotropin receptor; s 99.8 2.7E-21 9.4E-26 187.6 12.2 188 69-258 6-219 (239)
277 1xku_A Decorin; proteoglycan, 99.8 1.2E-20 4.2E-25 192.2 17.6 195 60-258 18-230 (330)
278 2id5_A Lingo-1, leucine rich r 99.8 5.6E-21 1.9E-25 204.9 15.7 187 70-256 6-212 (477)
279 2ft3_A Biglycan; proteoglycan, 99.8 1E-20 3.5E-25 192.9 16.5 186 69-257 29-254 (332)
280 3e6j_A Variable lymphocyte rec 99.8 8.7E-21 3E-25 182.9 14.4 157 68-240 16-176 (229)
281 3zyj_A Leucine-rich repeat-con 99.8 1.2E-20 4.1E-25 200.2 16.4 183 74-257 44-244 (440)
282 1wwl_A Monocyte differentiatio 99.8 1.6E-21 5.6E-26 197.2 9.2 174 83-258 95-288 (312)
283 1w8a_A SLIT protein; signaling 99.8 2.9E-21 9.9E-26 181.0 10.2 169 87-258 12-184 (192)
284 3v47_A TOLL-like receptor 5B a 99.8 7.3E-21 2.5E-25 202.5 14.4 171 69-239 6-196 (455)
285 2z80_A TOLL-like receptor 2, v 99.8 4E-21 1.4E-25 197.7 11.6 185 72-258 29-236 (353)
286 3rfs_A Internalin B, repeat mo 99.8 2.9E-20 9.8E-25 184.2 17.3 170 82-257 62-235 (272)
287 2xot_A Amphoterin-induced prot 99.8 8.9E-21 3.1E-25 195.8 12.7 170 87-259 22-204 (361)
288 3oja_B Anopheles plasmodium-re 99.8 1.2E-20 4.2E-25 207.9 14.7 132 84-215 52-185 (597)
289 3v47_A TOLL-like receptor 5B a 99.8 3.2E-20 1.1E-24 197.5 16.7 106 153-258 275-385 (455)
290 2v70_A SLIT-2, SLIT homolog 2 99.8 6.1E-20 2.1E-24 175.8 16.9 149 69-217 7-169 (220)
291 3vq2_A TLR4, TOLL-like recepto 99.8 1.2E-20 4.1E-25 208.4 13.6 190 68-257 4-217 (606)
292 1ziw_A TOLL-like receptor 3; i 99.8 2.9E-20 9.8E-25 208.2 15.7 175 70-244 1-192 (680)
293 1wwl_A Monocyte differentiatio 99.8 7.8E-21 2.7E-25 192.1 9.8 174 81-257 119-309 (312)
294 4glp_A Monocyte differentiatio 99.8 1.8E-20 6.2E-25 189.3 12.5 174 84-259 92-287 (310)
295 2z81_A CD282 antigen, TOLL-lik 99.8 1.2E-20 4E-25 205.9 11.9 183 74-258 5-210 (549)
296 3o6n_A APL1; leucine-rich repe 99.8 2.9E-20 1E-24 193.9 14.4 134 83-216 45-180 (390)
297 3cvr_A Invasion plasmid antige 99.8 2.1E-20 7E-25 203.0 13.3 161 60-241 33-197 (571)
298 3zyj_A Leucine-rich repeat-con 99.8 8.4E-20 2.9E-24 193.7 16.8 172 83-256 88-267 (440)
299 4eco_A Uncharacterized protein 99.8 5.8E-21 2E-25 212.0 8.1 174 81-257 247-446 (636)
300 2v9t_B SLIT homolog 2 protein 99.8 1.9E-19 6.4E-24 172.4 17.1 149 110-259 14-167 (220)
301 3vq2_A TLR4, TOLL-like recepto 99.8 4.9E-20 1.7E-24 203.5 14.9 174 83-257 350-534 (606)
302 3zyi_A Leucine-rich repeat-con 99.8 1.1E-19 3.6E-24 193.6 16.1 173 83-257 99-279 (452)
303 1zth_A RIO1 serine protein kin 99.8 1.4E-20 4.8E-25 184.8 8.5 141 412-568 49-222 (258)
304 2o6q_A Variable lymphocyte rec 99.8 2.4E-19 8.2E-24 177.3 17.2 158 83-240 61-222 (270)
305 3oja_A Leucine-rich immune mol 99.8 2.9E-20 1E-24 199.5 11.4 167 84-258 59-228 (487)
306 3e6j_A Variable lymphocyte rec 99.8 2.1E-19 7E-24 173.3 15.8 150 109-259 21-174 (229)
307 3oja_A Leucine-rich immune mol 99.8 3.1E-20 1E-24 199.4 10.6 169 82-259 79-252 (487)
308 3t6q_A CD180 antigen; protein- 99.8 1.3E-19 4.6E-24 200.0 15.8 174 84-258 377-561 (606)
309 4ecn_A Leucine-rich repeat pro 99.8 3.2E-20 1.1E-24 210.6 11.1 156 99-257 440-632 (876)
310 3t6q_A CD180 antigen; protein- 99.8 1.1E-19 3.6E-24 200.8 14.4 187 69-255 6-213 (606)
311 2z66_A Variable lymphocyte rec 99.8 7.1E-20 2.4E-24 184.4 11.9 178 82-260 77-264 (306)
312 1xku_A Decorin; proteoglycan, 99.8 3.6E-19 1.2E-23 181.3 16.2 172 82-257 75-253 (330)
313 2o6s_A Variable lymphocyte rec 99.8 3.6E-19 1.2E-23 168.8 15.1 170 78-257 5-178 (208)
314 3j0a_A TOLL-like receptor 5; m 99.8 1.4E-19 4.6E-24 207.5 14.1 185 73-257 14-217 (844)
315 1p9a_G Platelet glycoprotein I 99.8 5.2E-19 1.8E-23 176.8 16.6 153 82-237 54-209 (290)
316 4g8a_A TOLL-like receptor 4; l 99.8 1.7E-19 5.9E-24 199.6 14.1 175 69-243 25-221 (635)
317 3oja_B Anopheles plasmodium-re 99.8 3.9E-19 1.3E-23 195.9 16.8 174 83-257 75-314 (597)
318 2id5_A Lingo-1, leucine rich r 99.8 3.8E-19 1.3E-23 190.5 15.4 174 83-256 56-236 (477)
319 3o53_A Protein LRIM1, AGAP0063 99.8 7.6E-20 2.6E-24 185.3 9.3 169 82-258 57-228 (317)
320 3a79_B TLR6, VLRB.59, TOLL-lik 99.8 3.4E-19 1.2E-23 195.0 14.7 174 84-258 277-487 (562)
321 4b8c_D Glucose-repressible alc 99.8 6.5E-21 2.2E-25 214.0 0.9 199 39-243 129-361 (727)
322 1ziw_A TOLL-like receptor 3; i 99.8 7.7E-19 2.6E-23 196.6 17.5 178 83-260 405-625 (680)
323 3o6n_A APL1; leucine-rich repe 99.8 9E-19 3.1E-23 182.7 16.7 173 84-257 70-308 (390)
324 2xwt_C Thyrotropin receptor; s 99.8 2.5E-19 8.5E-24 173.8 11.0 170 82-254 54-236 (239)
325 4ezg_A Putative uncharacterize 99.8 4E-19 1.4E-23 167.1 12.0 151 82-237 43-195 (197)
326 2z7x_B TOLL-like receptor 1, v 99.8 2.1E-19 7.1E-24 194.7 11.5 172 84-258 248-458 (520)
327 1h6u_A Internalin H; cell adhe 99.8 7.6E-19 2.6E-23 177.2 14.2 168 82-258 62-231 (308)
328 2o6r_A Variable lymphocyte rec 99.8 9.8E-19 3.3E-23 161.3 12.5 135 69-216 3-139 (177)
329 1w8a_A SLIT protein; signaling 99.8 1.4E-18 4.9E-23 162.5 13.8 130 110-240 11-143 (192)
330 2ft3_A Biglycan; proteoglycan, 99.8 1.1E-18 3.8E-23 177.9 13.9 168 83-258 102-278 (332)
331 2z63_A TOLL-like receptor 4, v 99.8 5.7E-19 2E-23 193.3 12.6 176 83-259 347-533 (570)
332 2z62_A TOLL-like receptor 4, v 99.8 2.1E-18 7.1E-23 171.0 15.3 169 87-258 11-191 (276)
333 2xot_A Amphoterin-induced prot 99.8 5.6E-19 1.9E-23 182.3 10.4 168 69-237 14-203 (361)
334 4g8a_A TOLL-like receptor 4; l 99.8 1.4E-18 4.6E-23 192.4 14.3 180 59-246 12-196 (635)
335 2z63_A TOLL-like receptor 4, v 99.8 1.3E-18 4.5E-23 190.4 13.6 173 83-255 28-211 (570)
336 2z80_A TOLL-like receptor 2, v 99.8 3.9E-18 1.3E-22 175.4 16.1 176 76-257 26-211 (353)
337 3cvr_A Invasion plasmid antige 99.8 4.4E-18 1.5E-22 184.7 16.4 155 83-258 80-244 (571)
338 1h6t_A Internalin B; cell adhe 99.8 3.7E-18 1.3E-22 170.7 14.2 166 83-258 46-214 (291)
339 2z81_A CD282 antigen, TOLL-lik 99.8 4.3E-18 1.5E-22 185.5 15.7 174 78-256 2-184 (549)
340 2z7x_B TOLL-like receptor 1, v 99.8 5E-18 1.7E-22 183.8 15.9 149 108-258 248-435 (520)
341 1h6u_A Internalin H; cell adhe 99.8 8.6E-18 2.9E-22 169.4 15.7 169 82-259 40-210 (308)
342 2wfh_A SLIT homolog 2 protein 99.7 5.7E-18 1.9E-22 158.6 11.1 113 123-236 25-139 (193)
343 2wfh_A SLIT homolog 2 protein 99.7 1.5E-17 5.3E-22 155.6 13.9 126 87-216 14-141 (193)
344 4ay9_X Follicle-stimulating ho 99.7 6.4E-18 2.2E-22 173.6 12.2 190 70-259 6-217 (350)
345 3a79_B TLR6, VLRB.59, TOLL-lik 99.7 8.4E-18 2.9E-22 183.9 13.5 172 83-259 331-512 (562)
346 1jl5_A Outer protein YOPM; leu 99.7 3.4E-17 1.2E-21 174.0 17.5 161 83-258 131-291 (454)
347 4glp_A Monocyte differentiatio 99.7 2.5E-18 8.7E-23 173.5 8.3 177 80-257 114-307 (310)
348 2o6r_A Variable lymphocyte rec 99.7 2.3E-17 7.8E-22 152.1 13.9 131 109-240 9-141 (177)
349 3o53_A Protein LRIM1, AGAP0063 99.7 3.2E-18 1.1E-22 173.3 8.6 169 82-259 79-252 (317)
350 1o6v_A Internalin A; bacterial 99.7 2.3E-17 7.9E-22 176.2 14.9 165 85-258 223-389 (466)
351 1h6t_A Internalin B; cell adhe 99.7 2.2E-17 7.4E-22 165.1 13.8 147 82-237 67-214 (291)
352 2ell_A Acidic leucine-rich nuc 99.7 8.1E-18 2.8E-22 153.7 9.4 132 83-216 24-162 (168)
353 1m9s_A Internalin B; cell inva 99.7 2E-17 6.8E-22 181.4 13.5 147 82-238 64-212 (605)
354 2ell_A Acidic leucine-rich nuc 99.7 1.4E-17 4.9E-22 152.0 10.3 134 105-241 22-164 (168)
355 4ezg_A Putative uncharacterize 99.7 1.5E-17 5.3E-22 156.1 10.3 151 102-257 39-194 (197)
356 3bz5_A Internalin-J, INLJ; leu 99.7 1.5E-16 5E-21 169.3 17.8 163 83-258 42-226 (457)
357 4fmz_A Internalin; leucine ric 99.7 4.3E-17 1.5E-21 167.0 12.9 167 83-258 155-325 (347)
358 3bz5_A Internalin-J, INLJ; leu 99.7 1.5E-16 5.1E-21 169.2 17.5 162 82-258 84-247 (457)
359 1m9s_A Internalin B; cell inva 99.7 7.1E-17 2.4E-21 176.9 15.2 168 82-259 42-212 (605)
360 1xeu_A Internalin C; cellular 99.7 8.5E-17 2.9E-21 158.3 14.0 147 82-238 40-187 (263)
361 2je0_A Acidic leucine-rich nuc 99.7 1E-17 3.6E-22 149.7 6.8 126 83-210 17-149 (149)
362 1o6v_A Internalin A; bacterial 99.7 1.5E-16 5E-21 170.0 15.2 167 83-258 177-345 (466)
363 3g06_A SSPH2 (leucine-rich rep 99.7 7.5E-17 2.6E-21 177.1 12.8 136 60-215 12-155 (622)
364 1xeu_A Internalin C; cellular 99.7 5.7E-17 1.9E-21 159.5 10.7 164 84-259 20-187 (263)
365 1jl5_A Outer protein YOPM; leu 99.7 3.9E-16 1.3E-20 165.9 17.9 160 82-258 90-251 (454)
366 4gyi_A RIO2 kinase; protein ki 99.7 5.4E-17 1.9E-21 165.9 10.5 142 410-566 95-266 (397)
367 4fmz_A Internalin; leucine ric 99.7 2.1E-16 7E-21 161.9 14.0 166 83-257 132-300 (347)
368 2ca6_A RAN GTPase-activating p 99.7 1.7E-18 5.8E-23 180.3 -1.7 176 82-257 93-316 (386)
369 1dce_A Protein (RAB geranylger 99.7 2E-18 6.9E-23 188.1 -1.8 151 84-240 350-550 (567)
370 2je0_A Acidic leucine-rich nuc 99.7 3.7E-17 1.3E-21 146.1 6.8 125 105-231 15-148 (149)
371 3g39_A Variable lymphocyte rec 99.7 2.6E-16 8.9E-21 144.1 12.5 107 110-217 12-118 (170)
372 2r9u_A Variable lymphocyte rec 99.7 5.8E-16 2E-20 142.3 12.6 107 110-217 15-121 (174)
373 2ast_B S-phase kinase-associat 99.6 4.8E-18 1.6E-22 173.2 -2.5 172 83-255 70-258 (336)
374 4b8c_D Glucose-repressible alc 99.6 2.3E-17 7.9E-22 185.2 1.4 145 81-233 222-369 (727)
375 3g06_A SSPH2 (leucine-rich rep 99.6 2.4E-15 8.4E-20 165.0 17.4 54 83-142 81-134 (622)
376 1a9n_A U2A', U2A'; complex (nu 99.6 2.1E-16 7.2E-21 145.5 6.9 131 102-236 14-153 (176)
377 2ca6_A RAN GTPase-activating p 99.6 2.5E-17 8.6E-22 171.4 -0.3 86 153-238 159-259 (386)
378 3goz_A Leucine-rich repeat-con 99.6 5.2E-17 1.8E-21 167.6 0.4 154 84-237 23-210 (362)
379 2ast_B S-phase kinase-associat 99.6 2.4E-17 8.3E-22 168.0 -2.1 180 74-256 38-234 (336)
380 3goz_A Leucine-rich repeat-con 99.6 3.2E-17 1.1E-21 169.2 -1.9 174 84-257 52-266 (362)
381 1ds9_A Outer arm dynein; leuci 99.6 4.7E-18 1.6E-22 159.8 -8.9 130 83-217 18-156 (198)
382 1a9n_A U2A', U2A'; complex (nu 99.6 1.5E-15 5.1E-20 139.8 8.1 129 82-216 18-155 (176)
383 3g39_A Variable lymphocyte rec 99.6 3E-15 1E-19 137.0 9.7 103 87-192 13-117 (170)
384 1dce_A Protein (RAB geranylger 99.6 7.9E-15 2.7E-19 159.7 12.3 118 108-230 442-567 (567)
385 2r9u_A Variable lymphocyte rec 99.5 4.1E-14 1.4E-18 129.9 12.2 108 86-197 15-124 (174)
386 4ay9_X Follicle-stimulating ho 99.5 2.2E-14 7.5E-19 147.1 11.3 173 82-255 53-234 (350)
387 1ds9_A Outer arm dynein; leuci 99.5 3.8E-17 1.3E-21 153.6 -8.8 134 103-241 14-158 (198)
388 1z7x_W Ribonuclease inhibitor; 99.5 1E-15 3.6E-20 162.8 -2.6 174 84-257 86-297 (461)
389 1z7x_W Ribonuclease inhibitor; 99.5 1.4E-15 4.9E-20 161.7 -1.9 174 84-257 200-411 (461)
390 2ifg_A High affinity nerve gro 99.5 8.5E-14 2.9E-18 142.5 9.6 111 70-215 4-117 (347)
391 2ifg_A High affinity nerve gro 99.4 2.4E-13 8.4E-18 139.0 10.5 104 133-238 12-118 (347)
392 3tm0_A Aminoglycoside 3'-phosp 99.3 4.3E-12 1.5E-16 124.3 10.9 144 409-564 13-213 (263)
393 3un9_A NLR family member X1; l 99.3 3.4E-14 1.2E-18 146.6 -5.1 162 83-244 72-260 (372)
394 3sb4_A Hypothetical leucine ri 99.2 3.4E-11 1.1E-15 122.2 11.3 93 152-246 225-320 (329)
395 1nd4_A Aminoglycoside 3'-phosp 99.2 8.9E-12 3E-16 121.6 6.6 130 419-565 29-215 (264)
396 3un9_A NLR family member X1; l 99.1 1.5E-12 5.2E-17 134.3 -3.9 134 83-216 101-254 (372)
397 3dxp_A Putative acyl-COA dehyd 99.1 1.7E-10 5.9E-15 118.4 10.9 143 414-564 42-248 (359)
398 3sb4_A Hypothetical leucine ri 99.1 2.3E-10 7.8E-15 116.0 10.9 145 82-229 100-327 (329)
399 3ogk_B Coronatine-insensitive 99.1 1.6E-11 5.6E-16 134.6 -0.2 127 83-210 112-252 (592)
400 3ogk_B Coronatine-insensitive 98.9 1.7E-10 5.8E-15 126.5 2.7 102 84-186 139-252 (592)
401 3rw6_A Nuclear RNA export fact 98.9 4.6E-11 1.6E-15 116.3 -4.4 141 70-216 77-235 (267)
402 2p1m_B Transport inhibitor res 98.8 1.1E-10 3.6E-15 128.1 -3.8 128 82-210 104-244 (594)
403 2p1m_B Transport inhibitor res 98.8 1.2E-10 3.9E-15 127.8 -7.3 171 83-256 289-493 (594)
404 3r70_A Aminoglycoside phosphot 98.7 5.6E-08 1.9E-12 97.9 11.7 137 411-565 38-238 (320)
405 4fdw_A Leucine rich hypothetic 98.7 1.4E-07 4.8E-12 97.9 12.9 125 84-214 158-284 (401)
406 2ra8_A Uncharacterized protein 98.7 4E-09 1.4E-13 107.8 1.1 155 83-238 139-322 (362)
407 4fdw_A Leucine rich hypothetic 98.6 2.5E-07 8.4E-12 96.1 13.9 166 83-256 180-357 (401)
408 3sg8_A APH(2'')-ID; antibiotic 98.6 5.6E-08 1.9E-12 97.1 8.0 137 415-565 25-224 (304)
409 1io0_A Tropomodulin; LRR prote 98.6 1.8E-09 6.1E-14 99.7 -3.0 117 98-214 27-164 (185)
410 2ra8_A Uncharacterized protein 98.5 4.2E-08 1.4E-12 100.3 5.1 171 83-256 107-319 (362)
411 3rw6_A Nuclear RNA export fact 98.5 1.5E-08 5E-13 98.6 1.1 102 103-207 137-257 (267)
412 1io0_A Tropomodulin; LRR prote 98.5 1.1E-08 3.8E-13 94.4 -0.4 109 82-190 35-164 (185)
413 3tdw_A Gentamicin resistance p 98.5 1.1E-06 3.7E-11 87.8 13.4 137 415-565 24-225 (306)
414 3d1u_A Putative fructosamine-3 98.5 4.8E-07 1.6E-11 89.5 9.8 143 414-564 19-216 (288)
415 4gkh_A Aminoglycoside 3'-phosp 98.4 1.3E-06 4.5E-11 85.3 12.6 136 417-565 31-224 (272)
416 3ovc_A Hygromycin-B 4-O-kinase 98.3 1.9E-06 6.5E-11 88.1 11.0 144 414-565 45-244 (362)
417 3ats_A Putative uncharacterize 98.2 1.6E-06 5.5E-11 88.4 6.5 81 416-496 26-121 (357)
418 2q83_A YTAA protein; 2635576, 98.1 2.5E-05 8.5E-10 78.8 13.1 142 416-564 38-252 (346)
419 3jr1_A Putative fructosamine-3 97.9 7.2E-05 2.5E-09 74.5 11.5 140 414-560 40-232 (312)
420 2olc_A MTR kinase, methylthior 97.8 4E-05 1.4E-09 79.3 9.5 77 415-493 35-120 (397)
421 3rfe_A Platelet glycoprotein I 97.8 4.1E-05 1.4E-09 65.7 6.9 56 111-166 12-68 (130)
422 2pyw_A Uncharacterized protein 97.6 0.00026 8.7E-09 73.8 11.2 75 415-492 39-122 (420)
423 3f7w_A Putative fructosamine-3 97.6 0.00012 4.1E-09 72.0 7.9 77 413-495 18-97 (288)
424 3e4g_A ATP synthase subunit S, 97.5 2.2E-05 7.5E-10 70.8 1.9 84 129-212 61-150 (176)
425 1pgv_A TMD-1, tropomodulin TMD 97.5 5.9E-06 2E-10 76.0 -2.8 87 101-187 35-136 (197)
426 4gt6_A Cell surface protein; l 97.4 0.00056 1.9E-08 70.5 10.9 130 100-235 258-390 (394)
427 1pgv_A TMD-1, tropomodulin TMD 97.3 4.8E-05 1.6E-09 69.9 0.9 110 81-190 39-170 (197)
428 3rfe_A Platelet glycoprotein I 97.3 0.00039 1.3E-08 59.6 6.3 56 157-214 12-68 (130)
429 3dxq_A Choline/ethanolamine ki 97.3 0.0005 1.7E-08 68.0 7.9 31 534-565 173-203 (301)
430 2ppq_A HSK, HK, homoserine kin 97.2 0.00051 1.7E-08 68.5 7.9 144 416-564 28-217 (322)
431 3csv_A Aminoglycoside phosphot 97.2 0.00071 2.4E-08 67.9 8.6 32 534-565 183-218 (333)
432 3e4g_A ATP synthase subunit S, 97.1 8.3E-05 2.8E-09 67.0 0.7 38 83-120 61-99 (176)
433 4fs7_A Uncharacterized protein 97.1 0.0019 6.3E-08 66.5 10.8 142 84-233 231-376 (394)
434 4gt6_A Cell surface protein; l 97.1 0.0013 4.4E-08 67.8 9.4 123 84-214 266-391 (394)
435 1zyl_A Hypothetical protein YI 97.1 0.0054 1.9E-07 61.1 13.2 143 416-564 32-223 (328)
436 4h09_A Hypothetical leucine ri 97.0 0.0026 9E-08 64.9 10.6 129 98-231 208-341 (379)
437 4fs7_A Uncharacterized protein 97.0 0.007 2.4E-07 62.2 13.5 143 101-252 224-374 (394)
438 1nw1_A Choline kinase (49.2 KD 96.9 0.0015 5.1E-08 68.1 7.9 72 415-494 78-158 (429)
439 3feg_A Choline/ethanolamine ki 96.8 0.0028 9.4E-08 64.8 8.2 142 416-564 56-254 (379)
440 4h09_A Hypothetical leucine ri 96.5 0.013 4.6E-07 59.6 11.6 131 102-236 189-322 (379)
441 2qg7_A Ethanolamine kinase PV0 96.4 0.011 3.7E-07 62.0 10.2 74 415-495 113-188 (458)
442 3c5i_A Choline kinase; choline 96.3 0.012 4.1E-07 59.8 9.4 72 416-494 39-120 (369)
443 3i1a_A Spectinomycin phosphotr 96.3 0.015 5.1E-07 58.4 9.9 31 534-564 206-236 (339)
444 3f2s_A CK, chetk-alpha, cholin 95.4 0.031 1.1E-06 57.3 8.2 145 416-564 58-280 (401)
445 2k1k_A Ephrin type-A receptor 94.6 0.026 9E-07 36.3 2.9 31 298-328 6-36 (38)
446 3mes_A Choline kinase; malaria 94.4 0.12 4.1E-06 53.3 9.4 142 415-564 75-291 (424)
447 2ks1_B Epidermal growth factor 93.0 0.14 4.9E-06 33.9 4.4 27 305-331 13-39 (44)
448 2l2t_A Receptor tyrosine-prote 92.9 0.16 5.6E-06 33.6 4.5 27 304-330 11-37 (44)
449 3g15_A CK, chetk-alpha, cholin 91.0 0.53 1.8E-05 48.1 8.3 29 536-564 246-280 (401)
450 3cxl_A N-chimerin; SH2, RHO-GA 90.3 0.033 1.1E-06 58.4 -1.5 61 415-478 147-214 (463)
451 2jwa_A Receptor tyrosine-prote 89.4 0.34 1.2E-05 32.0 3.3 11 304-314 13-23 (44)
452 4ano_A ESSB; membrane protein, 88.2 1.5 5.2E-05 40.4 8.2 91 465-569 47-138 (219)
453 4ann_A ESSB; membrane protein, 86.6 1.4 4.8E-05 40.5 6.9 91 465-568 42-132 (215)
454 2l34_A TYRO protein tyrosine k 65.6 4.1 0.00014 25.1 2.3 27 300-326 4-30 (33)
455 2l8s_A Integrin alpha-1; trans 57.1 17 0.0006 25.0 4.4 27 301-327 8-34 (54)
456 2klu_A T-cell surface glycopro 56.5 19 0.00065 25.7 4.6 7 308-314 12-18 (70)
457 2knc_A Integrin alpha-IIB; tra 50.9 27 0.00094 24.0 4.7 28 300-327 10-37 (54)
458 2klu_A T-cell surface glycopro 47.7 8.9 0.0003 27.4 1.8 17 304-320 12-28 (70)
459 2lz0_A Uncharacterized protein 46.8 53 0.0018 25.7 6.7 39 171-210 14-52 (100)
460 3ls8_A Phosphatidylinositol 3- 44.8 2.3E+02 0.008 30.1 13.1 46 511-563 454-501 (614)
461 2k1a_A Integrin alpha-IIB; sin 38.3 26 0.0009 22.8 2.8 24 301-324 9-32 (42)
462 2lz0_A Uncharacterized protein 36.0 45 0.0015 26.1 4.6 48 139-187 6-53 (100)
463 1cja_A Protein (actin-fragmin 31.6 3E+02 0.01 26.8 10.4 138 416-566 75-239 (342)
464 2jp3_A FXYD domain-containing 29.1 40 0.0014 24.1 2.8 20 305-324 19-38 (67)
465 3hhm_A Phosphatidylinositol-4, 26.3 3.4E+02 0.012 31.0 11.2 25 539-563 937-961 (1091)
466 2jo1_A Phospholemman; FXYD1, N 22.5 1E+02 0.0036 22.2 3.9 20 305-324 18-37 (72)
467 2knc_B Integrin beta-3; transm 21.4 71 0.0024 23.9 3.1 16 305-320 13-28 (79)
468 1afo_A Glycophorin A; integral 21.2 1E+02 0.0035 19.5 3.2 26 304-329 11-36 (40)
No 1
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=4.5e-36 Score=305.26 Aligned_cols=163 Identities=25% Similarity=0.408 Sum_probs=139.7
Q ss_pred cCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 488 (577)
++|...+.||+|+||+||+|+. .+|+.||||+++.........+.|.+|+++|++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 5788999999999999999977 468999999997665556667889999999999999999999999999999999999
Q ss_pred ecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCCC
Q 008121 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (577)
Q Consensus 489 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~~ 568 (577)
||++|+|.++|+. .....+++.++..|+.||+.||+|||++ +||||||||+||||++++.+||+|||+|+.+...
T Consensus 104 y~~gg~L~~~i~~--~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 104 YCEGGDLFKRINA--QKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp CCTTCBHHHHHHH--TTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred CCCCCcHHHHHHH--cCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 9999999999963 2345678999999999999999999999 9999999999999999999999999999987654
Q ss_pred cc--ccccCCC
Q 008121 569 ER--QVITGTS 577 (577)
Q Consensus 569 ~~--~~~~Gt~ 577 (577)
.. ...+|||
T Consensus 179 ~~~~~~~~GT~ 189 (350)
T 4b9d_A 179 VELARACIGTP 189 (350)
T ss_dssp HHHHHHHHSCC
T ss_pred cccccccCCCc
Confidence 32 4567886
No 2
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=296.43 Aligned_cols=160 Identities=26% Similarity=0.441 Sum_probs=135.6
Q ss_pred hcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 488 (577)
.++|...+.||+|+||+||+|++.+ .||||+++....+....++|.+|+++|++++|||||+++|+|.+ +..|||||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 3567778899999999999998753 59999997655556677889999999999999999999998865 56899999
Q ss_pred ecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCCC
Q 008121 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (577)
Q Consensus 489 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~~ 568 (577)
||++|+|.++|+. ....++|.++++|+.|||+||+|||++ +||||||||+||||++++.+||+|||+|+.....
T Consensus 112 y~~gGsL~~~l~~---~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 112 WCEGSSLYKHLHV---QETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp CCSSCBHHHHHHT---SCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred cCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 9999999999962 345799999999999999999999999 9999999999999999999999999999976532
Q ss_pred c----cccccCCC
Q 008121 569 E----RQVITGTS 577 (577)
Q Consensus 569 ~----~~~~~Gt~ 577 (577)
. ....+||+
T Consensus 186 ~~~~~~~~~~GT~ 198 (307)
T 3omv_A 186 SGSQQVEQPTGSV 198 (307)
T ss_dssp --------CCCCT
T ss_pred CcceeecccccCC
Confidence 2 24567885
No 3
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.8e-35 Score=294.33 Aligned_cols=160 Identities=25% Similarity=0.363 Sum_probs=140.6
Q ss_pred CccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEe----CCeEEEEE
Q 008121 413 SQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE----HGQRLLVY 487 (577)
Q Consensus 413 ~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~~lv~ 487 (577)
...+.||+|+||+||+|.+. +++.||+|++..........+.|.+|+++|++++|||||+++++|.+ ++..|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 44567999999999999775 58899999997666566667889999999999999999999999865 34689999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC-CCCCeEEeccccCcccC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD-DELNPHLSDCGLAALTP 566 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~-~~~~~kl~DFGla~~~~ 566 (577)
|||++|+|.++++. ...+++..+..|+.||+.||+|||++. ++||||||||+|||++ +++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 99999999999973 457899999999999999999999981 2399999999999998 47999999999999887
Q ss_pred CCccccccCCC
Q 008121 567 NTERQVITGTS 577 (577)
Q Consensus 567 ~~~~~~~~Gt~ 577 (577)
.......+|||
T Consensus 184 ~~~~~~~~GTp 194 (290)
T 3fpq_A 184 ASFAKAVIGTP 194 (290)
T ss_dssp TTSBEESCSSC
T ss_pred CCccCCcccCc
Confidence 77778889997
No 4
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.1e-35 Score=297.97 Aligned_cols=155 Identities=26% Similarity=0.473 Sum_probs=135.3
Q ss_pred cCCCccceeccCccceEEEEEEc------CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 483 (577)
++|...+.||+|+||+||+|++. +++.||||+++.. +....++|.+|+++|++++|||||+++|+|.+++..
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 90 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 90 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC--ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence 45677889999999999999874 4788999999754 345677899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHhhhhcc---------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCe
Q 008121 484 LLVYEYVGNGNLHDMLHFAD---------DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNP 554 (577)
Q Consensus 484 ~lv~e~~~~g~L~~~l~~~~---------~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~ 554 (577)
|+|||||++|||.++|+... .....++|.++++|+.|||+||+|||++ +||||||||+|||+++++.+
T Consensus 91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcE
Confidence 99999999999999997432 2346799999999999999999999999 99999999999999999999
Q ss_pred EEeccccCcccCCCc
Q 008121 555 HLSDCGLAALTPNTE 569 (577)
Q Consensus 555 kl~DFGla~~~~~~~ 569 (577)
||+|||+|+......
T Consensus 168 Ki~DFGla~~~~~~~ 182 (299)
T 4asz_A 168 KIGDFGMSRDVYSTD 182 (299)
T ss_dssp EECCCSCHHHHTGGG
T ss_pred EECCcccceecCCCC
Confidence 999999999765544
No 5
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.9e-35 Score=297.91 Aligned_cols=155 Identities=27% Similarity=0.462 Sum_probs=130.4
Q ss_pred cCCCccceeccCccceEEEEEEc------CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 483 (577)
++|...+.||+|+||+||+|++. +++.||||+++.. +....++|.+|+++|++++|||||+++|+|.+.+..
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 118 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 118 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 45666788999999999999874 4789999999754 355677899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHhhhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC
Q 008121 484 LLVYEYVGNGNLHDMLHFADD-----------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL 552 (577)
Q Consensus 484 ~lv~e~~~~g~L~~~l~~~~~-----------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~ 552 (577)
|+|||||++|+|.++++.... ...+++|.++++|+.|||+||+|||+. +||||||||+||||++++
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGL 195 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTT
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCC
Confidence 999999999999999975321 235699999999999999999999998 999999999999999999
Q ss_pred CeEEeccccCcccCCCc
Q 008121 553 NPHLSDCGLAALTPNTE 569 (577)
Q Consensus 553 ~~kl~DFGla~~~~~~~ 569 (577)
.+||+|||+|+......
T Consensus 196 ~~Ki~DFGla~~~~~~~ 212 (329)
T 4aoj_A 196 VVKIGDFGMSRDIYSTD 212 (329)
T ss_dssp EEEECCCC---------
T ss_pred cEEEcccccceeccCCC
Confidence 99999999999765443
No 6
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.1e-35 Score=295.54 Aligned_cols=161 Identities=25% Similarity=0.355 Sum_probs=142.2
Q ss_pred cCCCccceeccCccceEEEEEE-cCCcEEEEEEcccccc-chHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
++|...+.||+|+||+||+|+. .+++.||||++.+... .....+.+.+|+++|++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4688899999999999999976 4689999999975432 2234567899999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||+++|||.++++. .+.+++.++..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+..
T Consensus 112 Ey~~gG~L~~~i~~----~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 112 SYAKNGELLKYIRK----IGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp CCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 99999999999973 35799999999999999999999999 999999999999999999999999999998753
Q ss_pred Cc----cccccCCC
Q 008121 568 TE----RQVITGTS 577 (577)
Q Consensus 568 ~~----~~~~~Gt~ 577 (577)
.. ..+.+|||
T Consensus 185 ~~~~~~~~~~~GTp 198 (311)
T 4aw0_A 185 ESKQARANSFVGTA 198 (311)
T ss_dssp TTTCCCBCCCCSCG
T ss_pred CCCcccccCcccCc
Confidence 32 35678986
No 7
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=4.3e-35 Score=294.86 Aligned_cols=154 Identities=26% Similarity=0.430 Sum_probs=132.8
Q ss_pred CCccceeccCccceEEEEEEc------CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEE
Q 008121 412 FSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (577)
Q Consensus 412 ~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 485 (577)
+...+.||+|+||+||+|.+. +++.||||+++... .....++|.+|+.++++++|||||+++|+|.+++..++
T Consensus 28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 445678999999999999873 46889999997543 33446789999999999999999999999999999999
Q ss_pred EEEecCCCCHHHhhhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC
Q 008121 486 VYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN 553 (577)
Q Consensus 486 v~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~ 553 (577)
|||||++|||.++|+.... ....++|.++++|+.|||+||+|||+. +||||||||+|||||++++
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCC
Confidence 9999999999999964321 124689999999999999999999999 9999999999999999999
Q ss_pred eEEeccccCcccCCCc
Q 008121 554 PHLSDCGLAALTPNTE 569 (577)
Q Consensus 554 ~kl~DFGla~~~~~~~ 569 (577)
+||+|||+|+......
T Consensus 184 ~Ki~DFGlar~~~~~~ 199 (308)
T 4gt4_A 184 VKISDLGLFREVYAAD 199 (308)
T ss_dssp EEECCSCCBCGGGGGG
T ss_pred EEECCcccceeccCCC
Confidence 9999999999765443
No 8
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=5.9e-35 Score=296.56 Aligned_cols=158 Identities=30% Similarity=0.429 Sum_probs=140.6
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 488 (577)
..|+..+.||+|+||+||+|... +|+.||||+++... ....+.+.+|+++|++++|||||+++++|.+++..|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmE 151 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 151 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG--CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCc--hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 46888899999999999999874 69999999996543 2234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCCC
Q 008121 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (577)
Q Consensus 489 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~~ 568 (577)
||++|+|.++++. ..+++.++..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+...
T Consensus 152 y~~gg~L~~~l~~-----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 223 (346)
T 4fih_A 152 FLEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 223 (346)
T ss_dssp CCTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred CCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCC
Confidence 9999999999962 4589999999999999999999999 9999999999999999999999999999987544
Q ss_pred c--cccccCCC
Q 008121 569 E--RQVITGTS 577 (577)
Q Consensus 569 ~--~~~~~Gt~ 577 (577)
. ....+|||
T Consensus 224 ~~~~~~~~GTp 234 (346)
T 4fih_A 224 VPRRKSLVGTP 234 (346)
T ss_dssp SCCBCCCCSCG
T ss_pred CCcccccccCc
Confidence 3 45678986
No 9
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.5e-35 Score=294.83 Aligned_cols=161 Identities=25% Similarity=0.357 Sum_probs=134.1
Q ss_pred cCCCccceeccCccceEEEEEEc----CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 485 (577)
++|+..+.||+|+||+||+|+.. +++.||||+++..........++.+|+++|++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 46888999999999999999762 46899999997654444444568899999999999999999999999999999
Q ss_pred EEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCccc
Q 008121 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (577)
Q Consensus 486 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~ 565 (577)
|||||++|||.++++. ...+++.++..|+.|++.||+|||++ +||||||||+|||+++++.+||+|||+|+..
T Consensus 104 vmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EECCCTTCEEHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEcCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 9999999999999973 35799999999999999999999999 9999999999999999999999999999976
Q ss_pred CCCc--cccccCCC
Q 008121 566 PNTE--RQVITGTS 577 (577)
Q Consensus 566 ~~~~--~~~~~Gt~ 577 (577)
.+.. ....+|||
T Consensus 177 ~~~~~~~~~~~GT~ 190 (304)
T 3ubd_A 177 IDHEKKAYSFCGTV 190 (304)
T ss_dssp ----CCCCSCCCCG
T ss_pred cCCCccccccccCc
Confidence 4433 35678986
No 10
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.3e-34 Score=282.79 Aligned_cols=160 Identities=27% Similarity=0.455 Sum_probs=127.1
Q ss_pred cCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccc-hHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
++|+..+.||+|+||+||+|.. .+|+.||||++++.... ......+.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 5799999999999999999976 46899999999654322 233567999999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||+ +|+|.+++. ....+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+...+
T Consensus 93 Ey~-~g~L~~~l~----~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 93 EYA-GNELFDYIV----QRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHH----HSCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred eCC-CCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 999 689999996 345799999999999999999999999 999999999999999999999999999997655
Q ss_pred Cc-cccccCCC
Q 008121 568 TE-RQVITGTS 577 (577)
Q Consensus 568 ~~-~~~~~Gt~ 577 (577)
.. ....+|||
T Consensus 165 ~~~~~~~~GT~ 175 (275)
T 3hyh_A 165 GNFLKTSCGSP 175 (275)
T ss_dssp ----------C
T ss_pred CCccCCeeECc
Confidence 44 35677886
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3e-34 Score=298.52 Aligned_cols=159 Identities=30% Similarity=0.431 Sum_probs=141.1
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
.+.|+..+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.+|++++|||||+++++|.+.+..||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT--CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc--hhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 356888999999999999999874 68999999996542 233456889999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
|||++|+|.++++. ..+++.++..|+.||+.||+|||++ +||||||||+||||+.++.+||+|||+|+.+..
T Consensus 228 Ey~~gG~L~~~i~~-----~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 228 EFLEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp ECCTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred eCCCCCcHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence 99999999999962 3589999999999999999999999 999999999999999999999999999998754
Q ss_pred C--ccccccCCC
Q 008121 568 T--ERQVITGTS 577 (577)
Q Consensus 568 ~--~~~~~~Gt~ 577 (577)
. .....+|||
T Consensus 300 ~~~~~~~~~GTp 311 (423)
T 4fie_A 300 EVPRRKSLVGTP 311 (423)
T ss_dssp SCCCBCCCEECT
T ss_pred CCccccccccCc
Confidence 4 345678986
No 12
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=7.2e-34 Score=286.27 Aligned_cols=150 Identities=29% Similarity=0.399 Sum_probs=127.7
Q ss_pred CCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCC----eEEEE
Q 008121 411 SFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG----QRLLV 486 (577)
Q Consensus 411 ~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~----~~~lv 486 (577)
+|...+.||+|+||+||+|++ +|+.||||+++... .....+..|+..+.+++|||||+++|+|.+++ ..|||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 466778999999999999988 58999999986432 22233445677778899999999999998654 57999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeeecCCCCCCeeeCCCCCeEEecccc
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV-----CLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~-----~~~~ivHrDlk~~NILl~~~~~~kl~DFGl 561 (577)
||||++|+|.++|+ ...++|..+.+|+.|+++||+|||++ +.++||||||||+|||+|+++++||+|||+
T Consensus 80 ~Ey~~~gsL~~~l~-----~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGl 154 (303)
T 3hmm_A 80 SDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp EECCTTCBHHHHHH-----HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred ecCCCCCcHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCC
Confidence 99999999999996 24689999999999999999999976 245899999999999999999999999999
Q ss_pred CcccCCCc
Q 008121 562 AALTPNTE 569 (577)
Q Consensus 562 a~~~~~~~ 569 (577)
|+......
T Consensus 155 a~~~~~~~ 162 (303)
T 3hmm_A 155 AVRHDSAT 162 (303)
T ss_dssp CEEEETTT
T ss_pred CccccCCC
Confidence 99765443
No 13
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=8.9e-34 Score=287.59 Aligned_cols=219 Identities=26% Similarity=0.449 Sum_probs=200.4
Q ss_pred CCChHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCccEEeeC----CcEEEEEcCCCCCcc--cccccccCCCCCCE
Q 008121 38 TTDSSDVQALQVLYTSLNSPSVLTNWKGNEGDPCGESWKGVACEG----SAVVSIDISGLGLSG--TMGYLLSDLLSLRK 111 (577)
Q Consensus 38 ~~~~~~~~~l~~~~~~~~~~~~l~~w~~~~~~~c~~~w~gv~C~~----~~v~~l~l~~~~l~g--~~~~~~~~l~~L~~ 111 (577)
.|.++|++||++||+++.++..+.+|.. +.|||.+.|.||.|+. ++|+.|+|++|+++| .+|..|+++++|++
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~ 80 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNF 80 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSE
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCe
Confidence 4788999999999999988777889975 4688955699999985 799999999999999 99999999999999
Q ss_pred EEccC-CCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCc
Q 008121 112 FDLSG-NSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNN 188 (577)
Q Consensus 112 L~Ls~-N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 188 (577)
|+|++ |++.+.+|..+. ++|++|+|++|++++.+|..|+++++|++|+|++|++++.+|..|.++++|++|+|++|+
T Consensus 81 L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 160 (313)
T 1ogq_A 81 LYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160 (313)
T ss_dssp EEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred eeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCc
Confidence 99995 999999998776 899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCccCCC-CCCeEEccCcccccccc-cCCCCCccEEEeecCccccccCcccc---cccceeecCCcCC
Q 008121 189 FSGDLPNSFISLS-NISSLYLQNNQVTGSLN-VFSGLPLTTLNVANNHFSGWIPRELI---SIRTFIYDGNSFD 257 (577)
Q Consensus 189 l~g~~p~~~~~l~-~L~~L~l~~N~l~~~~~-~~~~~~L~~L~l~~N~l~g~~p~~l~---~l~~l~~~~n~~~ 257 (577)
++|.+|..++.++ +|++|+|++|++++.++ .+..++|+.|++++|++++.+|..+. +++.|++++|.+.
T Consensus 161 l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 234 (313)
T 1ogq_A 161 ISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLA 234 (313)
T ss_dssp CEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEEC
T ss_pred ccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCcee
Confidence 9999999999998 99999999999998654 56666799999999999999887665 5677889999875
No 14
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4.5e-34 Score=289.22 Aligned_cols=154 Identities=26% Similarity=0.319 Sum_probs=132.8
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 488 (577)
+.|...++||+|+||+||+|++. +|+.||||+++.... +.+|+.++++++|||||++++++.+++..|||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE 130 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 45677788999999999999874 589999999965422 2469999999999999999999999999999999
Q ss_pred ecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC-CeEEeccccCcccCC
Q 008121 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL-NPHLSDCGLAALTPN 567 (577)
Q Consensus 489 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~-~~kl~DFGla~~~~~ 567 (577)
||++|+|.++|+. ...+++.++..|+.||+.||+|||++ +||||||||+||||+.++ .+||+|||+|+.+..
T Consensus 131 y~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~ 203 (336)
T 4g3f_A 131 LLEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203 (336)
T ss_dssp CCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred ccCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence 9999999999973 35699999999999999999999999 999999999999999987 699999999998754
Q ss_pred Ccc-------ccccCCC
Q 008121 568 TER-------QVITGTS 577 (577)
Q Consensus 568 ~~~-------~~~~Gt~ 577 (577)
... ..++|||
T Consensus 204 ~~~~~~~~~~~~~~GT~ 220 (336)
T 4g3f_A 204 DGLGKSLLTGDYIPGTE 220 (336)
T ss_dssp ----------CCCCCCG
T ss_pred CCcccceecCCccccCc
Confidence 332 2356885
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2e-33 Score=281.82 Aligned_cols=154 Identities=21% Similarity=0.333 Sum_probs=126.1
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCC-------
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG------- 481 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------- 481 (577)
++|+..+.||+|+||+||+|+.. +|+.||||+++... .....+.+.+|+++|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 35888899999999999999874 68999999996543 3445677999999999999999999999987544
Q ss_pred -----eEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEE
Q 008121 482 -----QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHL 556 (577)
Q Consensus 482 -----~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl 556 (577)
..|+|||||++|+|.++++.. ......++..++.|+.||++||+|||++ +||||||||+|||++.++.+||
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~-~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl 159 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGR-CTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKV 159 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTC-CSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhc-CCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEE
Confidence 368999999999999999732 1223456777899999999999999999 9999999999999999999999
Q ss_pred eccccCcccCCC
Q 008121 557 SDCGLAALTPNT 568 (577)
Q Consensus 557 ~DFGla~~~~~~ 568 (577)
+|||+|+.....
T Consensus 160 ~DFGla~~~~~~ 171 (299)
T 4g31_A 160 GDFGLVTAMDQD 171 (299)
T ss_dssp CCCCCC------
T ss_pred ccCccceecCCC
Confidence 999999987543
No 16
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4.8e-33 Score=284.87 Aligned_cols=161 Identities=23% Similarity=0.382 Sum_probs=137.3
Q ss_pred HHhhcCCCccceeccCccceEEEEEEcC------CcEEEEEEccccccchHHHHHHHHHHHHhhcCCC-CceeeEeeEEE
Q 008121 406 QTATNSFSQEFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH-PNIVTLAGYCA 478 (577)
Q Consensus 406 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H-~niv~l~~~~~ 478 (577)
+...++|...+.||+|+||+||+|.+.. ++.||||+++... .....++|.+|+++|++++| ||||+++|+|.
T Consensus 60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~ 138 (353)
T 4ase_A 60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACT 138 (353)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred EecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-ChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEE
Confidence 3445788889999999999999998643 3689999997643 34456789999999999976 89999999997
Q ss_pred eC-CeEEEEEEecCCCCHHHhhhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCC
Q 008121 479 EH-GQRLLVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSAN 545 (577)
Q Consensus 479 ~~-~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~N 545 (577)
.. +..|+|||||++|+|.++|+.... ....++|.+++.|+.|||+||+|||++ +||||||||+|
T Consensus 139 ~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~N 215 (353)
T 4ase_A 139 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARN 215 (353)
T ss_dssp CTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred ecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccc
Confidence 65 568999999999999999975321 235689999999999999999999999 99999999999
Q ss_pred eeeCCCCCeEEeccccCcccCCCcc
Q 008121 546 ILLDDELNPHLSDCGLAALTPNTER 570 (577)
Q Consensus 546 ILl~~~~~~kl~DFGla~~~~~~~~ 570 (577)
||+++++.+||+|||+|+.+.....
T Consensus 216 ILl~~~~~vKi~DFGlar~~~~~~~ 240 (353)
T 4ase_A 216 ILLSEKNVVKICDFGLARDIYKDPD 240 (353)
T ss_dssp EEECGGGCEEECCCGGGSCTTTCTT
T ss_pred eeeCCCCCEEECcchhhhhcccCCC
Confidence 9999999999999999997755443
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.97 E-value=9.1e-32 Score=280.11 Aligned_cols=160 Identities=24% Similarity=0.375 Sum_probs=138.4
Q ss_pred cCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEe------CCe
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE------HGQ 482 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~------~~~ 482 (577)
++|...+.||+|+||+||+|.. .+|+.||||+++.........+.+.+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 5788999999999999999977 469999999997655455566788999999999999999999998764 357
Q ss_pred EEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccC
Q 008121 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (577)
Q Consensus 483 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla 562 (577)
.|+|||||+ |+|.+++. ..+.+++.++..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|
T Consensus 134 ~~ivmE~~~-g~L~~~i~----~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIH----SSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp EEEEEECCS-EEHHHHHT----SSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeCCC-CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeeccee
Confidence 899999995 78999996 456799999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCC------ccccccCCC
Q 008121 563 ALTPNT------ERQVITGTS 577 (577)
Q Consensus 563 ~~~~~~------~~~~~~Gt~ 577 (577)
+.+... .....+||+
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~ 226 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATR 226 (398)
T ss_dssp BCC-------CCCCCSSCCCC
T ss_pred eecccCccccccccccceeCh
Confidence 976432 234567885
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.97 E-value=1.7e-31 Score=290.29 Aligned_cols=161 Identities=30% Similarity=0.345 Sum_probs=140.9
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccch-HHHH---HHHHHHHHhhcCCCCceeeEeeEEEeCCeEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL-QEED---NFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~---~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 484 (577)
++|...+.||+|+||+||+|+.. +|+.||||++++..... .... ....++.+++.++|||||+++++|.+.+..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 57999999999999999999775 58999999996543211 1122 2334467778889999999999999999999
Q ss_pred EEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcc
Q 008121 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (577)
Q Consensus 485 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~ 564 (577)
+|||||+||+|.++|+. ...+++..+..|+.||+.||+|||++ +||||||||+|||||.+|.+||+|||+|+.
T Consensus 269 lVmEy~~GGdL~~~l~~----~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQ----HGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp EEECCCCSCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeee
Confidence 99999999999999973 35699999999999999999999999 999999999999999999999999999999
Q ss_pred cCCCccccccCCC
Q 008121 565 TPNTERQVITGTS 577 (577)
Q Consensus 565 ~~~~~~~~~~Gt~ 577 (577)
+......+.+|||
T Consensus 342 ~~~~~~~t~~GTp 354 (689)
T 3v5w_A 342 FSKKKPHASVGTH 354 (689)
T ss_dssp CSSCCCCSCCSCG
T ss_pred cCCCCCCCccCCc
Confidence 8888888899996
No 19
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.97 E-value=2.1e-30 Score=266.86 Aligned_cols=148 Identities=23% Similarity=0.343 Sum_probs=130.9
Q ss_pred HhhcCCCccceeccCccceEEEEEEc----CCcEEEEEEccccccchHHHHHHHHHHHHhhcC-CCCceeeEeeEEEeCC
Q 008121 407 TATNSFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHG 481 (577)
Q Consensus 407 ~~~~~~~~~~~lg~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~ 481 (577)
...++|...+.||+|+||+||+|..+ +++.||||++.... ...++.+|+++|..+ +|||||++++++.+.+
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~ 93 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND 93 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc----CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC
Confidence 34578999999999999999999753 46889999986432 345678999999988 6999999999999999
Q ss_pred eEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC-CCeEEeccc
Q 008121 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE-LNPHLSDCG 560 (577)
Q Consensus 482 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~-~~~kl~DFG 560 (577)
+.|+||||+++|+|.++++ .+++.++..++.|++.||+|||++ +||||||||+|||++.+ +.+||+|||
T Consensus 94 ~~~lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFG 163 (361)
T 4f9c_A 94 HVVIAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFG 163 (361)
T ss_dssp EEEEEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EEEEEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCC
Confidence 9999999999999999984 489999999999999999999999 99999999999999876 799999999
Q ss_pred cCcccCCC
Q 008121 561 LAALTPNT 568 (577)
Q Consensus 561 la~~~~~~ 568 (577)
+|+...+.
T Consensus 164 la~~~~~~ 171 (361)
T 4f9c_A 164 LAQGTHDT 171 (361)
T ss_dssp TCEECTTC
T ss_pred CCcccCCc
Confidence 99866543
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.96 E-value=8.3e-30 Score=278.08 Aligned_cols=160 Identities=25% Similarity=0.417 Sum_probs=141.3
Q ss_pred cCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 488 (577)
++|.+.+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|+++|+.++|||||++++++.+.+..|+|||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E 234 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE 234 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc--hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence 5788999999999999999977 468999999986542 3445678999999999999999999999999999999999
Q ss_pred ecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC--CCeEEeccccCcccC
Q 008121 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE--LNPHLSDCGLAALTP 566 (577)
Q Consensus 489 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~--~~~kl~DFGla~~~~ 566 (577)
||++|+|.++|. .....+++.++..|+.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+.
T Consensus 235 ~~~gg~L~~~i~---~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 235 FMSGGELFEKVA---DEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp CCCCCBHHHHHT---CTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred ecCCCcHHHHHH---HhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 999999999985 2345799999999999999999999999 99999999999999854 899999999999876
Q ss_pred CCcc-ccccCCC
Q 008121 567 NTER-QVITGTS 577 (577)
Q Consensus 567 ~~~~-~~~~Gt~ 577 (577)
.... ...+||+
T Consensus 309 ~~~~~~~~~GT~ 320 (573)
T 3uto_A 309 PKQSVKVTTGTA 320 (573)
T ss_dssp TTSEEEEECSSG
T ss_pred CCCceeeeEECc
Confidence 5543 5677885
No 21
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=9.6e-30 Score=288.51 Aligned_cols=215 Identities=17% Similarity=0.314 Sum_probs=171.7
Q ss_pred cCCChHHHHHHHHHHHhcCCCCCCCCCCCCC----CCCCCCCC------------ccEEee-CCcEEEEEcCCCCCcccc
Q 008121 37 CTTDSSDVQALQVLYTSLNSPSVLTNWKGNE----GDPCGESW------------KGVACE-GSAVVSIDISGLGLSGTM 99 (577)
Q Consensus 37 ~~~~~~~~~~l~~~~~~~~~~~~l~~w~~~~----~~~c~~~w------------~gv~C~-~~~v~~l~l~~~~l~g~~ 99 (577)
.++..+|++||++||+++.++ +|+.++ .+||.|.| .||.|+ .++|+.|+|++++|+|.+
T Consensus 264 ~~~~~~d~~ALl~~k~~l~~~----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~i 339 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALDGK----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRV 339 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTTGG----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEE
T ss_pred cccchHHHHHHHHHHHHcCCC----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcC
Confidence 344567999999999999876 787543 47855699 999998 489999999999999999
Q ss_pred cccccCCCCCCEEEc-cCCCcCCc--------------------------------------------------------
Q 008121 100 GYLLSDLLSLRKFDL-SGNSIHDT-------------------------------------------------------- 122 (577)
Q Consensus 100 ~~~~~~l~~L~~L~L-s~N~l~~~-------------------------------------------------------- 122 (577)
|+.|++|++|++||| ++|.++|.
T Consensus 340 p~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~ 419 (876)
T 4ecn_A 340 PDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKK 419 (876)
T ss_dssp CGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCC
T ss_pred chHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccc
Confidence 999999999999999 88877665
Q ss_pred --------------------CCCCCC--CCccEEEccCCcCCC-----------------cCCCCcc--CCCCccEEEec
Q 008121 123 --------------------IPYQLP--PNLTSLNLASNNFSG-----------------NLPYSIA--SMVSLSYLNVS 161 (577)
Q Consensus 123 --------------------~p~~~~--~~L~~L~l~~N~l~~-----------------~~p~~~~--~l~~L~~L~L~ 161 (577)
+|..+. ++|++|+|++|+|+| .+|..++ ++++|++|+|+
T Consensus 420 ~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls 499 (876)
T 4ecn_A 420 DSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELY 499 (876)
T ss_dssp CCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred ccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECc
Confidence 554444 789999999999998 3888877 89999999999
Q ss_pred cCCCcccccccccCCCCCcEEeCcCCc-ccC-CCCCCccCCC-------CCCeEEccCcccccccc--cCCCCC-ccEEE
Q 008121 162 RNSLTQSIGDIFGNLAGLATLDLSFNN-FSG-DLPNSFISLS-------NISSLYLQNNQVTGSLN--VFSGLP-LTTLN 229 (577)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~g-~~p~~~~~l~-------~L~~L~l~~N~l~~~~~--~~~~~~-L~~L~ 229 (577)
+|++.+.+|..|+++++|++|+|++|+ |+| .+|..++.++ +|++|+|++|+|+..+. .+..++ |+.|+
T Consensus 500 ~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~L~~L~~L~ 579 (876)
T 4ecn_A 500 NCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLD 579 (876)
T ss_dssp SCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTTCTTCCEEE
T ss_pred CCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhhhhcCCCCCEEE
Confidence 999999999888899999999999887 887 7776555544 78888888888875444 455554 77777
Q ss_pred eecCccccccCcccc---cccceeecCCcCC
Q 008121 230 VANNHFSGWIPRELI---SIRTFIYDGNSFD 257 (577)
Q Consensus 230 l~~N~l~g~~p~~l~---~l~~l~~~~n~~~ 257 (577)
|++|+|+ .+| .+. +++.|.+++|.+.
T Consensus 580 Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~ 608 (876)
T 4ecn_A 580 CVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE 608 (876)
T ss_dssp CTTSCCC-BCC-CCCTTSEESEEECCSSCCS
T ss_pred CCCCCcc-cch-hhcCCCcceEEECcCCccc
Confidence 7777777 676 443 4455667777665
No 22
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.96 E-value=4.2e-29 Score=283.53 Aligned_cols=217 Identities=24% Similarity=0.327 Sum_probs=162.6
Q ss_pred ccCCChHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCccEEeeCCcEEEEEcCCCCCccc---cc------------
Q 008121 36 QCTTDSSDVQALQVLYTSLNSPSVLTNWKGNEGDPCGESWKGVACEGSAVVSIDISGLGLSGT---MG------------ 100 (577)
Q Consensus 36 ~~~~~~~~~~~l~~~~~~~~~~~~l~~w~~~~~~~c~~~w~gv~C~~~~v~~l~l~~~~l~g~---~~------------ 100 (577)
+..+.++|++||++||+++.|+..+.+|+. +.||| .|.||+|+.++|+.|+|+++++.|. +|
T Consensus 6 ~~~~~~~~~~all~~k~~~~~~~~l~~W~~-~~~~C--~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 6 PSQSLYREIHQLISFKDVLPDKNLLPDWSS-NKNPC--TFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp --CCHHHHHHHHHHHHTTCSCTTSSTTCCT-TSCGG--GSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred cccCCHHHHHHHHHHHhhCCCcccccCCCC-CCCCc--CCcceEECCCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 344467899999999999988778899984 46888 8999999999999999999999987 55
Q ss_pred -----------ccccCCCCCCEEEccCCCcCCcCCC--CCC--CCccEEEccCCcCCCcCCCCc-cCCCCccEEEeccCC
Q 008121 101 -----------YLLSDLLSLRKFDLSGNSIHDTIPY--QLP--PNLTSLNLASNNFSGNLPYSI-ASMVSLSYLNVSRNS 164 (577)
Q Consensus 101 -----------~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~--~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~L~~N~ 164 (577)
..|+.+++|++|||++|+++|.+|. .+. ++|++|+|++|.+++.+|..+ .++++|++|+|++|+
T Consensus 83 ~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 162 (768)
T 3rgz_A 83 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANS 162 (768)
T ss_dssp ECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSC
T ss_pred CCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCc
Confidence 4566777888888888888777776 554 778888888888877777665 677788888888888
Q ss_pred Cccccccc---ccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccccCCCCC-ccEEEeecCccccccC
Q 008121 165 LTQSIGDI---FGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP-LTTLNVANNHFSGWIP 240 (577)
Q Consensus 165 l~~~~p~~---~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~L~l~~N~l~g~~p 240 (577)
+++..|.. +.++++|++|+|++|++++.+|. ..+++|++|+|++|++++.++.+..++ |++|++++|++++.+|
T Consensus 163 l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~ 240 (768)
T 3rgz_A 163 ISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFS 240 (768)
T ss_dssp CEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSCHH
T ss_pred cCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCcCCCccc
Confidence 87777766 66777777777777777765553 567777777777777777666555554 7777777777777777
Q ss_pred cccc---cccceeecCCcCC
Q 008121 241 RELI---SIRTFIYDGNSFD 257 (577)
Q Consensus 241 ~~l~---~l~~l~~~~n~~~ 257 (577)
..+. +++.|++++|.+.
T Consensus 241 ~~l~~l~~L~~L~Ls~n~l~ 260 (768)
T 3rgz_A 241 RAISTCTELKLLNISSNQFV 260 (768)
T ss_dssp HHTTTCSSCCEEECCSSCCE
T ss_pred HHHhcCCCCCEEECCCCccc
Confidence 6544 4455666666654
No 23
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.96 E-value=1.2e-28 Score=251.27 Aligned_cols=162 Identities=25% Similarity=0.383 Sum_probs=143.4
Q ss_pred hcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
.++|...+.||+|+||.||+|.+ .+|+.||||++..........+++.+|+++++.++||||+++++++...+..|+||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45788899999999999999987 57999999999766555566778999999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||+++|+|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 94 e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 94 EYASGGEVFDYLVA----HGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp CCCTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred ECCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 99999999999963 35689999999999999999999999 999999999999999999999999999987654
Q ss_pred Cc-cccccCCC
Q 008121 568 TE-RQVITGTS 577 (577)
Q Consensus 568 ~~-~~~~~Gt~ 577 (577)
.. ....+||+
T Consensus 167 ~~~~~~~~gt~ 177 (328)
T 3fe3_A 167 GGKLDAFCGAP 177 (328)
T ss_dssp SCGGGTTSSSG
T ss_pred CCccccccCCc
Confidence 33 34556663
No 24
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.96 E-value=1.1e-28 Score=251.33 Aligned_cols=172 Identities=37% Similarity=0.699 Sum_probs=151.6
Q ss_pred ceeecHHHHHHhhcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeE
Q 008121 397 ATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476 (577)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~ 476 (577)
...++..++....++|...+.||+|+||.||+|...+++.||||++..... ......|.+|++++++++||||++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccC-chHHHHHHHHHHHHHhccCCCccceEEE
Confidence 356788999999999999999999999999999988899999999975432 2223368999999999999999999999
Q ss_pred EEeCCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEE
Q 008121 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHL 556 (577)
Q Consensus 477 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl 556 (577)
+...+..++||||+++|+|.++++........+++..+..|+.|++.||+|||+.+.++|+||||||+|||++.++.+||
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 99999999999999999999999865555667999999999999999999999987778999999999999999999999
Q ss_pred eccccCcccCCCc
Q 008121 557 SDCGLAALTPNTE 569 (577)
Q Consensus 557 ~DFGla~~~~~~~ 569 (577)
+|||+++......
T Consensus 176 ~Dfg~~~~~~~~~ 188 (326)
T 3uim_A 176 GDFGLAKLMDYKD 188 (326)
T ss_dssp CCCSSCEECCSSS
T ss_pred ccCccccccCccc
Confidence 9999999765433
No 25
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.95 E-value=3.4e-29 Score=278.18 Aligned_cols=214 Identities=17% Similarity=0.300 Sum_probs=183.5
Q ss_pred CChHHHHHHHHHHHhcCCCCCC---------CCCCCCCCCCCCCCC---ccEEeeC-CcEEEEEcCCCCCcccccccccC
Q 008121 39 TDSSDVQALQVLYTSLNSPSVL---------TNWKGNEGDPCGESW---KGVACEG-SAVVSIDISGLGLSGTMGYLLSD 105 (577)
Q Consensus 39 ~~~~~~~~l~~~~~~~~~~~~l---------~~w~~~~~~~c~~~w---~gv~C~~-~~v~~l~l~~~~l~g~~~~~~~~ 105 (577)
....|++||.++|++++++.|- .+|+. +.|+| .| .||+|+. ++|+.|+|++++++|.+|+.|++
T Consensus 27 ~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-~~~~c--~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~ 103 (636)
T 4eco_A 27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-NKELD--MWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQ 103 (636)
T ss_dssp HHHHHHHHHHHHHHHTTGGGCCCCC------CCCCC-SSCGG--GTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGG
T ss_pred hHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-CCCcc--cccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhc
Confidence 3456999999999999876432 37985 46778 89 9999975 69999999999999999999999
Q ss_pred CCCCCEEEccCCCc------------------------------------------------------------------
Q 008121 106 LLSLRKFDLSGNSI------------------------------------------------------------------ 119 (577)
Q Consensus 106 l~~L~~L~Ls~N~l------------------------------------------------------------------ 119 (577)
|++|++|||++|.+
T Consensus 104 L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l 183 (636)
T 4eco_A 104 LTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITL 183 (636)
T ss_dssp CTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCC
T ss_pred CccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccch
Confidence 99999999999944
Q ss_pred ------------CCcCCCCCC--CCccEEEccCCcCCCc-----------------CCCCcc--CCCCccEEEeccCCCc
Q 008121 120 ------------HDTIPYQLP--PNLTSLNLASNNFSGN-----------------LPYSIA--SMVSLSYLNVSRNSLT 166 (577)
Q Consensus 120 ------------~~~~p~~~~--~~L~~L~l~~N~l~~~-----------------~p~~~~--~l~~L~~L~L~~N~l~ 166 (577)
+| +|..+. ++|++|+|++|+|+|. +|..++ ++++|++|+|++|++.
T Consensus 184 ~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~ 262 (636)
T 4eco_A 184 KDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNL 262 (636)
T ss_dssp CTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTC
T ss_pred hhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCC
Confidence 34 676665 8999999999999996 999999 9999999999999999
Q ss_pred ccccccccCCCCCcEEeCcCCc-ccC-CCCCCccCC------CCCCeEEccCcccccccc--cCCCCC-ccEEEeecCcc
Q 008121 167 QSIGDIFGNLAGLATLDLSFNN-FSG-DLPNSFISL------SNISSLYLQNNQVTGSLN--VFSGLP-LTTLNVANNHF 235 (577)
Q Consensus 167 ~~~p~~~~~l~~L~~L~Ls~N~-l~g-~~p~~~~~l------~~L~~L~l~~N~l~~~~~--~~~~~~-L~~L~l~~N~l 235 (577)
|.+|..|+++++|++|+|++|+ |+| .+|..++.+ ++|++|+|++|+|+..+. .+..++ |+.|++++|++
T Consensus 263 ~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~l 342 (636)
T 4eco_A 263 TKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQL 342 (636)
T ss_dssp SSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCCC
T ss_pred ccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCcCCcC
Confidence 9999999999999999999998 998 889888776 899999999999995555 566665 89999999999
Q ss_pred ccccCcccc---cccceeecCCcCC
Q 008121 236 SGWIPRELI---SIRTFIYDGNSFD 257 (577)
Q Consensus 236 ~g~~p~~l~---~l~~l~~~~n~~~ 257 (577)
+|.+| .+. +++.|++++|.+.
T Consensus 343 ~g~ip-~~~~l~~L~~L~L~~N~l~ 366 (636)
T 4eco_A 343 EGKLP-AFGSEIKLASLNLAYNQIT 366 (636)
T ss_dssp EEECC-CCEEEEEESEEECCSSEEE
T ss_pred ccchh-hhCCCCCCCEEECCCCccc
Confidence 98888 554 5566777777765
No 26
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.95 E-value=2.6e-28 Score=257.92 Aligned_cols=170 Identities=24% Similarity=0.279 Sum_probs=144.0
Q ss_pred HHHHHHhhcCCCccceeccCccceEEEEEEcC-CcEEEEEEcccccc-chHHHHHHHHHHHHhhcCCCCceeeEeeEEEe
Q 008121 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE 479 (577)
Q Consensus 402 ~~~~~~~~~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~ 479 (577)
+.++....++|...+.||+|+||+||+|+..+ ++.||+|++++... .......+.+|..++..++||||++++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 44555667889999999999999999998865 78999999864321 11123348899999999999999999999999
Q ss_pred CCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEecc
Q 008121 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559 (577)
Q Consensus 480 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DF 559 (577)
.+..|+||||+++|+|.++++. ....+++..+..++.|++.||+|||+. +||||||||+|||++.++.+||+||
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~---~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DF 219 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSK---FEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADF 219 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEecCCCCcHHHHHHH---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcch
Confidence 9999999999999999999962 246799999999999999999999999 9999999999999999999999999
Q ss_pred ccCcccCCCcc---ccccCCC
Q 008121 560 GLAALTPNTER---QVITGTS 577 (577)
Q Consensus 560 Gla~~~~~~~~---~~~~Gt~ 577 (577)
|+|+....... ...+||+
T Consensus 220 Gla~~~~~~~~~~~~~~~GT~ 240 (437)
T 4aw2_A 220 GSCLKLMEDGTVQSSVAVGTP 240 (437)
T ss_dssp TTCEECCTTSCEECCSCCSCG
T ss_pred hhhhhcccCCCcccccccCCc
Confidence 99987654433 2356774
No 27
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.95 E-value=1.5e-27 Score=241.28 Aligned_cols=151 Identities=25% Similarity=0.502 Sum_probs=135.5
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 488 (577)
++|...+.||+|+||.||+|.+. +++.||+|++... .....+.|.+|++++++++||||+++++++.+.+..++|||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 87 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF--DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE 87 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence 56778899999999999999875 5899999988543 35567789999999999999999999999999999999999
Q ss_pred ecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCCC
Q 008121 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (577)
Q Consensus 489 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~~ 568 (577)
|+++|+|.++++. ....+++.++..|+.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 88 ~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 88 YIKGGTLRGIIKS---MDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp CCTTCBHHHHHHH---CCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred ecCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence 9999999999973 245699999999999999999999999 9999999999999999999999999999876443
No 28
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.95 E-value=4.8e-28 Score=246.14 Aligned_cols=161 Identities=35% Similarity=0.719 Sum_probs=143.2
Q ss_pred cHHHHHHhhcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeC
Q 008121 401 TVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH 480 (577)
Q Consensus 401 ~~~~~~~~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~ 480 (577)
...++...+++|...+.||+|+||.||+|.+.+++.||||++.... ....+.+.+|++++++++||||+++++++...
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES--SQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC--SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 3344556778999999999999999999998889999999986542 34567799999999999999999999999999
Q ss_pred CeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccc
Q 008121 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (577)
Q Consensus 481 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFG 560 (577)
+..++||||+++|+|.+++.........+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCT
T ss_pred CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecc
Confidence 999999999999999999975443445699999999999999999999999 99999999999999999999999999
Q ss_pred cCcccC
Q 008121 561 LAALTP 566 (577)
Q Consensus 561 la~~~~ 566 (577)
+++...
T Consensus 185 ~~~~~~ 190 (321)
T 2qkw_B 185 ISKKGT 190 (321)
T ss_dssp TCEECS
T ss_pred cccccc
Confidence 998654
No 29
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.95 E-value=3e-28 Score=255.42 Aligned_cols=167 Identities=21% Similarity=0.291 Sum_probs=142.3
Q ss_pred HHHHHhhcCCCccceeccCccceEEEEEEc-CCcEEEEEEcccccc-chHHHHHHHHHHHHhhcCCCCceeeEeeEEEeC
Q 008121 403 ASLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH 480 (577)
Q Consensus 403 ~~~~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~ 480 (577)
.++....++|...+.||+|+||.||+|+.. +++.||+|++++... .....+.+.+|+.+++.++|||||++++++.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 445556678999999999999999999875 588999999864321 111234578899999999999999999999999
Q ss_pred CeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccc
Q 008121 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (577)
Q Consensus 481 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFG 560 (577)
+..|+||||+++|+|.++++. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~-----~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG 213 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFG 213 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEeCCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccc
Confidence 999999999999999999962 3589999999999999999999999 99999999999999999999999999
Q ss_pred cCcccCCCcc---ccccCCC
Q 008121 561 LAALTPNTER---QVITGTS 577 (577)
Q Consensus 561 la~~~~~~~~---~~~~Gt~ 577 (577)
+|+....... ...+||+
T Consensus 214 ~a~~~~~~~~~~~~~~~gt~ 233 (410)
T 3v8s_A 214 TCMKMNKEGMVRCDTAVGTP 233 (410)
T ss_dssp TCEECCTTSEEECCSCCSCG
T ss_pred eeEeeccCCcccccCCcCCc
Confidence 9987765432 3556774
No 30
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.95 E-value=8.4e-28 Score=245.90 Aligned_cols=161 Identities=25% Similarity=0.353 Sum_probs=138.7
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEcccccc-chHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
++|...+.||+|+||.||+|+.. +++.||+|++++... .......+.+|+++++.++||||+++++++...+..|+||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 56888899999999999999875 589999999965421 2234567889999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 85 E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 157 (337)
T 1o6l_A 85 EYANGGELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157 (337)
T ss_dssp ECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence 99999999999963 35689999999999999999999999 999999999999999999999999999986432
Q ss_pred --CccccccCCC
Q 008121 568 --TERQVITGTS 577 (577)
Q Consensus 568 --~~~~~~~Gt~ 577 (577)
......+||+
T Consensus 158 ~~~~~~~~~gt~ 169 (337)
T 1o6l_A 158 DGATMKTFCGTP 169 (337)
T ss_dssp TTCCBCCCEECG
T ss_pred CCCcccccccCh
Confidence 2234455664
No 31
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.95 E-value=1.5e-27 Score=241.24 Aligned_cols=156 Identities=35% Similarity=0.549 Sum_probs=132.6
Q ss_pred hhcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 408 ~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
..++|...+.||+|+||.||+|+. +++.||||++..........++|.+|++++++++||||+++++++...+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 356788889999999999999987 5889999999776555666778999999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeeCCCCCeEEeccccCccc
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS--VVHRNFKSANILLDDELNPHLSDCGLAALT 565 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~--ivHrDlk~~NILl~~~~~~kl~DFGla~~~ 565 (577)
||+++|+|.++++... ....+++..++.++.|+++||+|||+. + |+||||||+|||++.++.+||+|||+++..
T Consensus 114 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp ECCTTCBHHHHHHSTT-HHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred ecCCCCcHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 9999999999996211 112489999999999999999999998 7 999999999999999999999999999865
Q ss_pred CCC
Q 008121 566 PNT 568 (577)
Q Consensus 566 ~~~ 568 (577)
...
T Consensus 190 ~~~ 192 (309)
T 3p86_A 190 AST 192 (309)
T ss_dssp ---
T ss_pred ccc
Confidence 443
No 32
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.95 E-value=5.8e-28 Score=253.42 Aligned_cols=171 Identities=22% Similarity=0.247 Sum_probs=145.0
Q ss_pred cHHHHHHhhcCCCccceeccCccceEEEEEEc-CCcEEEEEEcccccc-chHHHHHHHHHHHHhhcCCCCceeeEeeEEE
Q 008121 401 TVASLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCA 478 (577)
Q Consensus 401 ~~~~~~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~ 478 (577)
.+.+.....++|...+.||+|+||.||+++.. +++.||+|++++... .....+.+.+|..++..++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 34455556788999999999999999999875 689999999864321 1222345788999999999999999999999
Q ss_pred eCCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEec
Q 008121 479 EHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSD 558 (577)
Q Consensus 479 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~D 558 (577)
+.+..|+||||+++|+|.++++.. ...+++..+..++.||+.||+|||+. +||||||||+|||++.++.+||+|
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~D 205 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLAD 205 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEee
Confidence 999999999999999999999632 34689999999999999999999999 999999999999999999999999
Q ss_pred cccCcccCCCcc---ccccCCC
Q 008121 559 CGLAALTPNTER---QVITGTS 577 (577)
Q Consensus 559 FGla~~~~~~~~---~~~~Gt~ 577 (577)
||+++....... ...+||+
T Consensus 206 FGla~~~~~~~~~~~~~~~Gt~ 227 (412)
T 2vd5_A 206 FGSCLKLRADGTVRSLVAVGTP 227 (412)
T ss_dssp CTTCEECCTTSCEECSSCCSCG
T ss_pred chhheeccCCCccccceecccc
Confidence 999998755433 2356774
No 33
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.95 E-value=1.1e-27 Score=245.95 Aligned_cols=160 Identities=24% Similarity=0.358 Sum_probs=133.4
Q ss_pred hcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
.++|...+.||+|+||.||+|.. .+|+.||||++..... ......+.+|++++++++||||+++++++...+..++||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~-~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTL-GSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEcccc-chHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 46788899999999999999976 5689999999865432 223456889999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||+++|+|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 88 E~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 160 (347)
T 3zgw_A 88 EYCPGGELFDYIIS----QDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160 (347)
T ss_dssp ECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred eCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence 99999999999963 34689999999999999999999999 999999999999999999999999999987644
Q ss_pred Ccc---ccccCC
Q 008121 568 TER---QVITGT 576 (577)
Q Consensus 568 ~~~---~~~~Gt 576 (577)
... ...+||
T Consensus 161 ~~~~~~~~~~gt 172 (347)
T 3zgw_A 161 NKDYHLQTCCGS 172 (347)
T ss_dssp -----------C
T ss_pred CCCccccccCCc
Confidence 322 344455
No 34
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.95 E-value=1.9e-27 Score=241.36 Aligned_cols=160 Identities=27% Similarity=0.421 Sum_probs=139.3
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEcccccc-chHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
++|...+.||+|+||.||+++.. +|+.||+|+++.... .....+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 56888899999999999999875 689999999865422 1223566889999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||+++|+|.++++. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 86 e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 86 DYIEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158 (318)
T ss_dssp CCCCSCBHHHHHHH----TSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred eCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence 99999999999973 45689999999999999999999999 999999999999999999999999999997654
Q ss_pred CccccccCCC
Q 008121 568 TERQVITGTS 577 (577)
Q Consensus 568 ~~~~~~~Gt~ 577 (577)
.....+||+
T Consensus 159 -~~~~~~gt~ 167 (318)
T 1fot_A 159 -VTYTLCGTP 167 (318)
T ss_dssp -CBCCCCSCT
T ss_pred -ccccccCCc
Confidence 344556764
No 35
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.95 E-value=1.1e-27 Score=246.57 Aligned_cols=162 Identities=23% Similarity=0.332 Sum_probs=135.4
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEcccccc-chHHHHHHHHHHHHhhcC-CCCceeeEeeEEEeCCeEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 485 (577)
.++|...+.||+|+||.||+|+.. +++.||||+++.... .....+.+.+|.+++..+ +||||+++++++.+.+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 467888999999999999999875 589999999975421 223355678899999988 69999999999999999999
Q ss_pred EEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCccc
Q 008121 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (577)
Q Consensus 486 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~ 565 (577)
||||+++|+|.++++. ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+..
T Consensus 102 v~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQK----SRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 9999999999999973 35689999999999999999999999 9999999999999999999999999999964
Q ss_pred CCC--ccccccCCC
Q 008121 566 PNT--ERQVITGTS 577 (577)
Q Consensus 566 ~~~--~~~~~~Gt~ 577 (577)
... .....+||+
T Consensus 175 ~~~~~~~~~~~gt~ 188 (353)
T 3txo_A 175 ICNGVTTATFCGTP 188 (353)
T ss_dssp CC---------CCG
T ss_pred ccCCccccccCCCc
Confidence 332 234556774
No 36
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.95 E-value=1.7e-27 Score=247.57 Aligned_cols=161 Identities=25% Similarity=0.386 Sum_probs=140.1
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEcccccc-chHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
++|...+.||+|+||.||++... +++.||+|++..... .....+.+.+|+++++.++|||||++++++.+.+..|+||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 56888899999999999999775 488999999864321 2233567889999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||+++|+|.++++ ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+....
T Consensus 95 e~~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 95 DLLLGGDLRYHLQ----QNVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp CCCTTEEHHHHHH----TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 9999999999997 345799999999999999999999999 999999999999999999999999999997654
Q ss_pred Cc-cccccCCC
Q 008121 568 TE-RQVITGTS 577 (577)
Q Consensus 568 ~~-~~~~~Gt~ 577 (577)
.. ....+||+
T Consensus 168 ~~~~~~~~gt~ 178 (384)
T 4fr4_A 168 ETQITTMAGTK 178 (384)
T ss_dssp TCCBCCCCSCG
T ss_pred CCceeccCCCc
Confidence 33 34566764
No 37
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=2.3e-28 Score=249.31 Aligned_cols=215 Identities=20% Similarity=0.276 Sum_probs=187.5
Q ss_pred cCCChHHHHHHHHHHHhcC-CC-CCCCCCC---CCCCCCCCCCCccEEeeC----------CcEEEEEcCCCCCcccccc
Q 008121 37 CTTDSSDVQALQVLYTSLN-SP-SVLTNWK---GNEGDPCGESWKGVACEG----------SAVVSIDISGLGLSGTMGY 101 (577)
Q Consensus 37 ~~~~~~~~~~l~~~~~~~~-~~-~~l~~w~---~~~~~~c~~~w~gv~C~~----------~~v~~l~l~~~~l~g~~~~ 101 (577)
.....+|++||+++|+++. ++ +++..|. ....++| .|.|+.|+. .+|+.|+|++|+++ .+|.
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~--~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~ 98 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIE--TRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPD 98 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSC--CSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCS
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhccccccccccc--ccCCcchhhhHHHHhcccccceeEEEccCCCch-hcCh
Confidence 4456789999999999883 44 5677884 2345666 899999963 78999999999998 7888
Q ss_pred cccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccC----
Q 008121 102 LLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGN---- 175 (577)
Q Consensus 102 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~---- 175 (577)
.++.+++|++|+|++|+|+ .+|..+. ++|++|+|++|+|+ .+|..|+++++|++|+|++|++.+.+|..+..
T Consensus 99 ~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~ 176 (328)
T 4fcg_A 99 QAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDAS 176 (328)
T ss_dssp CGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-C
T ss_pred hhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccch
Confidence 8999999999999999999 8898776 89999999999999 88999999999999999999999999987765
Q ss_pred -----CCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccccCCCCC-ccEEEeecCccccccCcccc---cc
Q 008121 176 -----LAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP-LTTLNVANNHFSGWIPRELI---SI 246 (577)
Q Consensus 176 -----l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~L~l~~N~l~g~~p~~l~---~l 246 (577)
+++|++|+|++|+|+ .+|..++++++|++|+|++|+|++.++.+..++ |+.|++++|++.+.+|..+. ++
T Consensus 177 ~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L 255 (328)
T 4fcg_A 177 GEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPL 255 (328)
T ss_dssp CCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCC
T ss_pred hhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCC
Confidence 999999999999999 899999999999999999999999877776665 99999999999999998765 56
Q ss_pred cceeecCCcCC
Q 008121 247 RTFIYDGNSFD 257 (577)
Q Consensus 247 ~~l~~~~n~~~ 257 (577)
+.|++++|...
T Consensus 256 ~~L~L~~n~~~ 266 (328)
T 4fcg_A 256 KRLILKDCSNL 266 (328)
T ss_dssp CEEECTTCTTC
T ss_pred CEEECCCCCch
Confidence 67888887654
No 38
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.95 E-value=3.9e-27 Score=239.54 Aligned_cols=167 Identities=29% Similarity=0.368 Sum_probs=141.8
Q ss_pred ecHHHHHHhhcC----------CCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCC
Q 008121 400 YTVASLQTATNS----------FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHP 468 (577)
Q Consensus 400 ~~~~~~~~~~~~----------~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~ 468 (577)
++.+++..+++. |...+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++++||
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 25 VTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--CCSHHHHHHHHHHHTTCCCT
T ss_pred CcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc--hhHHHHHHHHHHHHHhCCCC
Confidence 455555555543 566678999999999999876 69999999986442 33456789999999999999
Q ss_pred ceeeEeeEEEeCCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee
Q 008121 469 NIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL 548 (577)
Q Consensus 469 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl 548 (577)
||+++++++...+..++||||+++|+|.+++. ...+++..+..++.|+++||+|||+. +|+||||||+|||+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll 174 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVS-----QVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILL 174 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEE
Confidence 99999999999999999999999999999985 34689999999999999999999999 99999999999999
Q ss_pred CCCCCeEEeccccCcccCCCc--cccccCC
Q 008121 549 DDELNPHLSDCGLAALTPNTE--RQVITGT 576 (577)
Q Consensus 549 ~~~~~~kl~DFGla~~~~~~~--~~~~~Gt 576 (577)
+.++.+||+|||+++...... .....||
T Consensus 175 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 204 (321)
T 2c30_A 175 TLDGRVKLSDFGFCAQISKDVPKRKSLVGT 204 (321)
T ss_dssp CTTCCEEECCCTTCEECCSSSCCBCCCCSC
T ss_pred CCCCcEEEeeeeeeeecccCccccccccCC
Confidence 999999999999998765432 2334455
No 39
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.95 E-value=3e-27 Score=239.24 Aligned_cols=152 Identities=26% Similarity=0.368 Sum_probs=133.1
Q ss_pred hcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 488 (577)
.++|...+.||+|+||.||+|...+++.||+|++..........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 46788899999999999999999889999999997554344445778999999999999999999999999999999999
Q ss_pred ecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 489 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
|++ |+|.+.+.. ....+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 100 ~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 100 FME-KDLKKVLDE---NKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp CCS-EEHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred CCC-CCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 997 588888862 345689999999999999999999999 999999999999999999999999999987643
No 40
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.95 E-value=3.9e-27 Score=236.82 Aligned_cols=158 Identities=27% Similarity=0.403 Sum_probs=138.2
Q ss_pred hcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
.++|...+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 96 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG--CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc--ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence 46789999999999999999976 568999999986443 223566899999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||+++|+|.+++.. ..+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 97 e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (297)
T 3fxz_A 97 EYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (297)
T ss_dssp ECCTTCBHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred ECCCCCCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 99999999999962 3589999999999999999999999 999999999999999999999999999987654
Q ss_pred Ccc--ccccCC
Q 008121 568 TER--QVITGT 576 (577)
Q Consensus 568 ~~~--~~~~Gt 576 (577)
... ....||
T Consensus 169 ~~~~~~~~~gt 179 (297)
T 3fxz_A 169 EQSKRSTMVGT 179 (297)
T ss_dssp TTCCBCCCCSC
T ss_pred cccccCCccCC
Confidence 433 334455
No 41
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.95 E-value=1.5e-27 Score=248.93 Aligned_cols=162 Identities=23% Similarity=0.340 Sum_probs=137.6
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccc-hHHHHHHHHHHHHhhcC-CCCceeeEeeEEEeCCeEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 485 (577)
.++|...+.||+|+||.||+|+.. +++.||+|++++.... ....+.+.+|..++.++ +|||||++++++.+.+..|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 457888999999999999999875 4789999999754322 22334577888888876 89999999999999999999
Q ss_pred EEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCccc
Q 008121 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (577)
Q Consensus 486 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~ 565 (577)
||||+++|+|.++++. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+..
T Consensus 131 V~E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEcCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 9999999999999973 35689999999999999999999999 9999999999999999999999999999863
Q ss_pred C--CCccccccCCC
Q 008121 566 P--NTERQVITGTS 577 (577)
Q Consensus 566 ~--~~~~~~~~Gt~ 577 (577)
. .......+||+
T Consensus 204 ~~~~~~~~~~~gt~ 217 (396)
T 4dc2_A 204 LRPGDTTSTFCGTP 217 (396)
T ss_dssp CCTTCCBCCCCBCG
T ss_pred ccCCCccccccCCc
Confidence 2 33345667774
No 42
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.95 E-value=4.4e-27 Score=244.00 Aligned_cols=156 Identities=26% Similarity=0.470 Sum_probs=136.1
Q ss_pred hcCCCccceeccCccceEEEEEEc--------CCcEEEEEEccccccchHHHHHHHHHHHHhhcC-CCCceeeEeeEEEe
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA--------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAE 479 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~ 479 (577)
.++|...+.||+|+||.||+|++. ++..||||+++... .....+++.+|+++++++ +||||++++++|..
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC-BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc-CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 357888899999999999999763 35679999997543 345567899999999999 89999999999999
Q ss_pred CCeEEEEEEecCCCCHHHhhhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCee
Q 008121 480 HGQRLLVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANIL 547 (577)
Q Consensus 480 ~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIL 547 (577)
.+..|+||||+++|+|.++++.... ....+++.+++.++.||++||+|||+. +|+||||||+|||
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIl 235 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 235 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEE
Confidence 9999999999999999999975321 124589999999999999999999999 9999999999999
Q ss_pred eCCCCCeEEeccccCcccCCC
Q 008121 548 LDDELNPHLSDCGLAALTPNT 568 (577)
Q Consensus 548 l~~~~~~kl~DFGla~~~~~~ 568 (577)
++.++.+||+|||+++.....
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~ 256 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNI 256 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCC
T ss_pred ECCCCCEEEccccCCcccCcc
Confidence 999999999999999976543
No 43
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.95 E-value=3.9e-27 Score=240.01 Aligned_cols=155 Identities=21% Similarity=0.327 Sum_probs=132.9
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCC------
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG------ 481 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------ 481 (577)
.++|...+.||+|+||.||+|... +++.||||+++... .....+.+.+|++++++++||||++++++|.+.+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 356888899999999999999886 78999999986543 3345677999999999999999999999986543
Q ss_pred ---------------------------------------------------eEEEEEEecCCCCHHHhhhhccCCCCCCC
Q 008121 482 ---------------------------------------------------QRLLVYEYVGNGNLHDMLHFADDSSKNLT 510 (577)
Q Consensus 482 ---------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~~l~ 510 (577)
..++||||+++|+|.++++... .....+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~ 162 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC-SLEDRE 162 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC-SGGGSC
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc-Cccchh
Confidence 3799999999999999997432 234457
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCCC
Q 008121 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (577)
Q Consensus 511 ~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~~ 568 (577)
+..++.|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 217 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQD 217 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC
T ss_pred hHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccc
Confidence 778999999999999999999 9999999999999999999999999999987654
No 44
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.95 E-value=3.5e-27 Score=240.33 Aligned_cols=153 Identities=27% Similarity=0.460 Sum_probs=135.2
Q ss_pred hcCCCccceeccCccceEEEEEEc----CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 484 (577)
.++|...+.||+|+||.||+|.+. .+..||||+++... .....+.|.+|++++++++||||+++++++.+.+..+
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 126 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM 126 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccE
Confidence 356788899999999999999874 35569999997543 3455678999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcc
Q 008121 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (577)
Q Consensus 485 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~ 564 (577)
+||||+++|+|.++++. ....+++.++..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 127 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 127 IVTEYMENGSLDTFLRT---HDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp EEEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EEeeCCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 99999999999999962 345799999999999999999999999 999999999999999999999999999997
Q ss_pred cCCC
Q 008121 565 TPNT 568 (577)
Q Consensus 565 ~~~~ 568 (577)
....
T Consensus 201 ~~~~ 204 (325)
T 3kul_A 201 LEDD 204 (325)
T ss_dssp CC--
T ss_pred cccC
Confidence 7544
No 45
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.95 E-value=3.5e-27 Score=242.26 Aligned_cols=161 Identities=24% Similarity=0.345 Sum_probs=138.8
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEcccccc-chHHHHHHHHHHHHhhcC-CCCceeeEeeEEEeCCeEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 486 (577)
++|...+.||+|+||.||+|+.. +++.||+|+++.... .....+.+.+|..++.++ +||||+++++++.+.+..|+|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 46788899999999999999875 588999999975432 234456788999999887 899999999999999999999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccC
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~ 566 (577)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 89 ~e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp ECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 999999999999963 34689999999999999999999999 99999999999999999999999999998643
Q ss_pred --CCccccccCCC
Q 008121 567 --NTERQVITGTS 577 (577)
Q Consensus 567 --~~~~~~~~Gt~ 577 (577)
.......+||+
T Consensus 162 ~~~~~~~~~~gt~ 174 (345)
T 3a8x_A 162 RPGDTTSTFCGTP 174 (345)
T ss_dssp CTTCCBCCCCSCG
T ss_pred CCCCcccccCCCc
Confidence 22334556764
No 46
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.95 E-value=4.6e-27 Score=243.03 Aligned_cols=162 Identities=25% Similarity=0.382 Sum_probs=141.4
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
.++|...+.||+|+||.||+|... +++.||+|++..........+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 467888999999999999999774 5899999999765555556678999999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC---CCeEEeccccCcc
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE---LNPHLSDCGLAAL 564 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~---~~~kl~DFGla~~ 564 (577)
||+++|+|.+++. ....+++.++..++.|++.||+|||+. +|+||||||+|||++.+ +.+||+|||+++.
T Consensus 108 e~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 108 DLVTGGELFEDIV----AREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp CCCCSCBHHHHHT----TCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred ecCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 9999999999986 345789999999999999999999999 99999999999999865 4599999999997
Q ss_pred cCCCcc-ccccCCC
Q 008121 565 TPNTER-QVITGTS 577 (577)
Q Consensus 565 ~~~~~~-~~~~Gt~ 577 (577)
...... ...+||+
T Consensus 181 ~~~~~~~~~~~gt~ 194 (362)
T 2bdw_A 181 VNDSEAWHGFAGTP 194 (362)
T ss_dssp CTTCCSCCCSCSCT
T ss_pred ecCCcccccCCCCc
Confidence 764433 3455664
No 47
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.94 E-value=4.7e-27 Score=242.60 Aligned_cols=162 Identities=25% Similarity=0.316 Sum_probs=139.9
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccch----HHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL----QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 483 (577)
.+.|...+.||+|+||.||+|... +|+.||+|.++...... ...+.+.+|+.++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 456888999999999999999875 58999999997543221 1356789999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC----CeEEecc
Q 008121 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL----NPHLSDC 559 (577)
Q Consensus 484 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~----~~kl~DF 559 (577)
++||||+++|+|.+++. ....+++.++..++.||+.||+|||+. +|+||||||+|||+++++ .+||+||
T Consensus 91 ~lv~e~~~gg~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 91 VLILELVSGGELFDFLA----QKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEECCCSCBHHHHHT----TCSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 99999999999999996 345799999999999999999999999 999999999999998877 7999999
Q ss_pred ccCcccCCCc-cccccCCC
Q 008121 560 GLAALTPNTE-RQVITGTS 577 (577)
Q Consensus 560 Gla~~~~~~~-~~~~~Gt~ 577 (577)
|+++...... ....+||+
T Consensus 164 G~a~~~~~~~~~~~~~gt~ 182 (361)
T 2yab_A 164 GLAHEIEDGVEFKNIFGTP 182 (361)
T ss_dssp SSCEECCTTCCCCCCCSCG
T ss_pred CCceEcCCCCccccCCCCc
Confidence 9999775543 34455764
No 48
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.94 E-value=2.3e-27 Score=243.43 Aligned_cols=164 Identities=21% Similarity=0.360 Sum_probs=138.9
Q ss_pred HhhcCCCccceeccCccceEEEEEEc-CCcEEEEEEcccccc-chHHHHHHHHHHHHhhcC-CCCceeeEeeEEEeCCeE
Q 008121 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQR 483 (577)
Q Consensus 407 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~ 483 (577)
...++|...+.||+|+||.||+|+.. +++.||||+++.... .....+.+..|.+++..+ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 34578889999999999999999875 589999999965421 122345677888888876 999999999999999999
Q ss_pred EEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCc
Q 008121 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (577)
Q Consensus 484 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~ 563 (577)
|+||||+++|+|.++++. ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 94 ~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~ 166 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQS----CHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK 166 (345)
T ss_dssp EEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhh
Confidence 999999999999999973 34689999999999999999999999 99999999999999999999999999998
Q ss_pred ccC--CCccccccCCC
Q 008121 564 LTP--NTERQVITGTS 577 (577)
Q Consensus 564 ~~~--~~~~~~~~Gt~ 577 (577)
... .......+||+
T Consensus 167 ~~~~~~~~~~~~~gt~ 182 (345)
T 1xjd_A 167 ENMLGDAKTNTFCGTP 182 (345)
T ss_dssp CCCCTTCCBCCCCSCG
T ss_pred hcccCCCcccCCCCCc
Confidence 653 23345566774
No 49
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.94 E-value=2.9e-27 Score=233.94 Aligned_cols=150 Identities=27% Similarity=0.481 Sum_probs=135.6
Q ss_pred cCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEEe
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 489 (577)
++|...+.||+|+||.||+|.+.+++.||+|++..... ..+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc---CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 56778899999999999999998899999999975432 345689999999999999999999999999999999999
Q ss_pred cCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCCC
Q 008121 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (577)
Q Consensus 490 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~~ 568 (577)
+++|+|.++++. ....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 87 MEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp CTTCBHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred CCCCcHHHHHHh---cCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccc
Confidence 999999999962 345689999999999999999999999 9999999999999999999999999999876543
No 50
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.94 E-value=3e-27 Score=243.43 Aligned_cols=166 Identities=23% Similarity=0.298 Sum_probs=139.3
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccc---hHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS---LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 484 (577)
.+.|...+.||+|+||.||+|... +++.||||++...... ....+.+.+|+.+++.++||||+++++++.+.+..|
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 356888899999999999999774 6899999998643211 113567899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC---eEEecccc
Q 008121 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN---PHLSDCGL 561 (577)
Q Consensus 485 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~---~kl~DFGl 561 (577)
+||||+++|+|.+.+.........+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 99999999999988865444455689999999999999999999999 9999999999999986654 99999999
Q ss_pred CcccCCCcc--ccccCCC
Q 008121 562 AALTPNTER--QVITGTS 577 (577)
Q Consensus 562 a~~~~~~~~--~~~~Gt~ 577 (577)
++....... ...+||+
T Consensus 180 a~~~~~~~~~~~~~~gt~ 197 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTP 197 (351)
T ss_dssp CEECCTTSCBCCCCCSCG
T ss_pred eeEecCCCeeecCCcCCc
Confidence 998765432 3345653
No 51
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=9.2e-27 Score=236.76 Aligned_cols=160 Identities=16% Similarity=0.235 Sum_probs=138.7
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
.++|...+.||+|+||.||+|... +++.||+|.+... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 80 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIF 80 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC---cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEE
Confidence 357888999999999999999775 5889999998643 344567889999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC--CCCeEEeccccCccc
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD--ELNPHLSDCGLAALT 565 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~--~~~~kl~DFGla~~~ 565 (577)
||+++|+|.+++. .....+++.++..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++..
T Consensus 81 e~~~g~~L~~~l~---~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~ 154 (321)
T 1tki_A 81 EFISGLDIFERIN---TSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154 (321)
T ss_dssp CCCCCCBHHHHHT---SSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred EeCCCCCHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence 9999999999995 2345689999999999999999999999 9999999999999987 789999999999987
Q ss_pred CCCcc-ccccCCC
Q 008121 566 PNTER-QVITGTS 577 (577)
Q Consensus 566 ~~~~~-~~~~Gt~ 577 (577)
..... ....||+
T Consensus 155 ~~~~~~~~~~gt~ 167 (321)
T 1tki_A 155 KPGDNFRLLFTAP 167 (321)
T ss_dssp CTTCEEEEEESCG
T ss_pred CCCCccccccCCh
Confidence 55433 3344553
No 52
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.94 E-value=3.7e-27 Score=244.77 Aligned_cols=153 Identities=27% Similarity=0.471 Sum_probs=129.5
Q ss_pred hcCCCccceeccCccceEEEEEEc----CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 484 (577)
.++|...+.||+|+||.||+|.+. ++..||||+++... .....++|.+|+.++++++||||+++++++...+..+
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 122 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence 357888999999999999999765 57789999997543 3455678999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcc
Q 008121 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (577)
Q Consensus 485 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~ 564 (577)
+||||+++|+|.++++. ....+++.+++.|+.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 123 lv~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRK---HDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 99999999999999962 345799999999999999999999999 999999999999999999999999999997
Q ss_pred cCCC
Q 008121 565 TPNT 568 (577)
Q Consensus 565 ~~~~ 568 (577)
....
T Consensus 197 ~~~~ 200 (373)
T 2qol_A 197 LEDD 200 (373)
T ss_dssp ----
T ss_pred cccC
Confidence 6543
No 53
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.94 E-value=5.2e-27 Score=235.52 Aligned_cols=153 Identities=25% Similarity=0.330 Sum_probs=134.6
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccc-cchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAA-LSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 486 (577)
.++|...+.||+|+||.||+|+.. +++.||+|++.... ......+.|.+|+.++++++||||+++++++...+..|+|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 357888999999999999999764 68899999985432 2234567899999999999999999999999999999999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccC
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~ 566 (577)
|||+++|+|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 90 ~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 90 MEYIEGPTLSEYIES----HGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 999999999999963 34689999999999999999999999 99999999999999999999999999998765
Q ss_pred CC
Q 008121 567 NT 568 (577)
Q Consensus 567 ~~ 568 (577)
..
T Consensus 163 ~~ 164 (294)
T 4eqm_A 163 ET 164 (294)
T ss_dssp --
T ss_pred cc
Confidence 43
No 54
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.94 E-value=3.1e-27 Score=243.08 Aligned_cols=160 Identities=23% Similarity=0.366 Sum_probs=139.0
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEcccccc-chHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
++|...+.||+|+||.||++... +|+.||+|+++.... .....+.+.+|+++++.++||||+++++++.+.+..|+||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 56888899999999999999875 689999999865421 1233567889999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 121 e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 121 EYVAGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp ECCTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 99999999999973 34689999999999999999999999 999999999999999999999999999997654
Q ss_pred CccccccCCC
Q 008121 568 TERQVITGTS 577 (577)
Q Consensus 568 ~~~~~~~Gt~ 577 (577)
. ....+||+
T Consensus 194 ~-~~~~~gt~ 202 (350)
T 1rdq_E 194 R-TWTLCGTP 202 (350)
T ss_dssp C-BCCCEECG
T ss_pred C-cccccCCc
Confidence 3 33455653
No 55
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.94 E-value=2.8e-27 Score=240.82 Aligned_cols=150 Identities=27% Similarity=0.377 Sum_probs=131.9
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
.++|...+.||+|+||.||+|... +++.||||++..... ....+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 84 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc-cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 357888999999999999999875 689999999864322 233466889999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~ 566 (577)
||+++|+|.++++ ....+++.++..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 85 e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 156 (323)
T 3tki_A 85 EYCSGGELFDRIE----PDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (323)
T ss_dssp ECCTTEEGGGGSB----TTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EcCCCCcHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceec
Confidence 9999999999986 445799999999999999999999999 99999999999999999999999999998654
No 56
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.94 E-value=3.4e-27 Score=244.41 Aligned_cols=151 Identities=20% Similarity=0.280 Sum_probs=130.5
Q ss_pred hhcCCCccceeccCccceEEEEE------EcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCC---CCceeeEeeEEE
Q 008121 408 ATNSFSQEFLIGEGSLGRVYRAE------FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR---HPNIVTLAGYCA 478 (577)
Q Consensus 408 ~~~~~~~~~~lg~G~fg~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~~~~~ 478 (577)
..++|...+.||+|+||.||+|. ..+++.||||+++.. ...++.+|++++..++ |+||+++++++.
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~ 137 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHL 137 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-----ChhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence 34678888999999999999993 456889999998643 2345777777777776 999999999999
Q ss_pred eCCeEEEEEEecCCCCHHHhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC-------
Q 008121 479 EHGQRLLVYEYVGNGNLHDMLHFADD-SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD------- 550 (577)
Q Consensus 479 ~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~------- 550 (577)
..+..|+||||+++|+|.++++.... ....+++.+++.|+.|+++||+|||+. +||||||||+|||++.
T Consensus 138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC--
T ss_pred cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccc
Confidence 99999999999999999999975433 356799999999999999999999999 9999999999999998
Q ss_pred ----CCCeEEeccccCcccC
Q 008121 551 ----ELNPHLSDCGLAALTP 566 (577)
Q Consensus 551 ----~~~~kl~DFGla~~~~ 566 (577)
++.+||+|||+|+.+.
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~ 234 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMK 234 (365)
T ss_dssp ----CTTEEECCCTTCEEGG
T ss_pred cccccCCEEEeeCchhhhhh
Confidence 8999999999997543
No 57
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.94 E-value=5.3e-27 Score=248.66 Aligned_cols=163 Identities=25% Similarity=0.335 Sum_probs=140.2
Q ss_pred hhcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEE
Q 008121 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 408 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 486 (577)
..++|...+.||+|+||.||+|.. .+|+.||+|++..........+.+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 346788899999999999999976 4689999999976655555677899999999999999999999999999999999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC---CCCCeEEeccccCc
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD---DELNPHLSDCGLAA 563 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~---~~~~~kl~DFGla~ 563 (577)
|||+++|+|.+.+.. ...+++.++..++.|++.||+|||+. +|+||||||+|||++ +++.+||+|||+|+
T Consensus 89 ~E~~~gg~L~~~i~~----~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 89 FDLVTGGELFEDIVA----REYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp ECCCBCCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 999999999999863 45689999999999999999999999 999999999999998 46789999999998
Q ss_pred ccCCCcc--ccccCCC
Q 008121 564 LTPNTER--QVITGTS 577 (577)
Q Consensus 564 ~~~~~~~--~~~~Gt~ 577 (577)
....... ....||+
T Consensus 162 ~~~~~~~~~~~~~gt~ 177 (444)
T 3soa_A 162 EVEGEQQAWFGFAGTP 177 (444)
T ss_dssp CCCTTCCBCCCSCSCG
T ss_pred EecCCCceeecccCCc
Confidence 7755433 2345663
No 58
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.94 E-value=1e-26 Score=233.06 Aligned_cols=151 Identities=23% Similarity=0.345 Sum_probs=133.8
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 488 (577)
++|...+.||+|+||.||+|... +++.||||++............+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46888899999999999999875 58999999997655445556788999999999999999999999999999999999
Q ss_pred ecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 489 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
|+++ ++.+.+.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 82 ~~~~-~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 82 FCDQ-DLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp CCSE-EHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred cCCC-CHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 9975 66666642 346799999999999999999999999 999999999999999999999999999987643
No 59
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.94 E-value=4.8e-27 Score=232.17 Aligned_cols=154 Identities=24% Similarity=0.429 Sum_probs=137.8
Q ss_pred hcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 488 (577)
.++|...+.||+|+||.||+|++.++..||+|+++.... ..+++.+|++++.+++||||+++++++...+..++|||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM---SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC---cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 457888899999999999999999888999999975432 34568999999999999999999999999999999999
Q ss_pred ecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCCC
Q 008121 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (577)
Q Consensus 489 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~~ 568 (577)
|+++|+|.++++.. ...+++.++..|+.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 84 YISNGCLLNYLRSH---GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp CCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred ccCCCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 99999999999632 34689999999999999999999999 9999999999999999999999999999977655
Q ss_pred ccc
Q 008121 569 ERQ 571 (577)
Q Consensus 569 ~~~ 571 (577)
...
T Consensus 158 ~~~ 160 (268)
T 3sxs_A 158 QYV 160 (268)
T ss_dssp CEE
T ss_pred hhh
Confidence 443
No 60
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.94 E-value=4.2e-27 Score=239.99 Aligned_cols=162 Identities=23% Similarity=0.363 Sum_probs=128.9
Q ss_pred hcCCCccceeccCccceEEEEEE----cCCcEEEEEEcccccc--chHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCe
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF----ANGKIMAVKKIDNAAL--SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 482 (577)
.++|...+.||+|+||.||+++. .+++.||+|+++.... .......+.+|++++++++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35688889999999999999987 4689999999975432 12234567889999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccC
Q 008121 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (577)
Q Consensus 483 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla 562 (577)
.|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~ 168 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLER----EGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLC 168 (327)
T ss_dssp EEEEEECCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred EEEEEeCCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcc
Confidence 9999999999999999963 34688999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCc--cccccCCC
Q 008121 563 ALTPNTE--RQVITGTS 577 (577)
Q Consensus 563 ~~~~~~~--~~~~~Gt~ 577 (577)
+...... ....+||+
T Consensus 169 ~~~~~~~~~~~~~~gt~ 185 (327)
T 3a62_A 169 KESIHDGTVTHTFCGTI 185 (327)
T ss_dssp ----------CTTSSCC
T ss_pred cccccCCccccccCCCc
Confidence 8643322 23445653
No 61
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.94 E-value=4.1e-27 Score=242.26 Aligned_cols=163 Identities=20% Similarity=0.287 Sum_probs=139.0
Q ss_pred hhcCCCccceeccCccceEEEEEEcC-CcEEEEEEcccccc-chHHHHHHHHHHHHhhcC-CCCceeeEeeEEEeCCeEE
Q 008121 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRL 484 (577)
Q Consensus 408 ~~~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~ 484 (577)
..++|...+.||+|+||.||+|+... ++.||+|+++.... .....+.+..|.+++..+ +||||+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 34678889999999999999998864 78999999865422 122356678899999888 8999999999999999999
Q ss_pred EEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcc
Q 008121 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (577)
Q Consensus 485 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~ 564 (577)
+||||+++|+|.++++. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 98 lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp EEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 99999999999999973 34689999999999999999999999 999999999999999999999999999996
Q ss_pred cCC--CccccccCCC
Q 008121 565 TPN--TERQVITGTS 577 (577)
Q Consensus 565 ~~~--~~~~~~~Gt~ 577 (577)
... ......+||+
T Consensus 171 ~~~~~~~~~~~~gt~ 185 (353)
T 2i0e_A 171 NIWDGVTTKTFCGTP 185 (353)
T ss_dssp CCCTTCCBCCCCSCG
T ss_pred cccCCcccccccCCc
Confidence 432 2345566774
No 62
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.94 E-value=2.3e-27 Score=246.75 Aligned_cols=153 Identities=23% Similarity=0.417 Sum_probs=135.9
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
.++|...+.||+|+||.||+|.+. +++.||||+++... .....++|.+|++++++++||||+++++++...+..++||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS-CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 356778899999999999999886 68999999987542 3445567899999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||+++|+|.++++.. ...+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 192 e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp ECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred EcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence 999999999999732 34589999999999999999999999 999999999999999999999999999987544
Q ss_pred C
Q 008121 568 T 568 (577)
Q Consensus 568 ~ 568 (577)
.
T Consensus 266 ~ 266 (377)
T 3cbl_A 266 G 266 (377)
T ss_dssp S
T ss_pred C
Confidence 3
No 63
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.94 E-value=4.2e-27 Score=240.54 Aligned_cols=160 Identities=29% Similarity=0.425 Sum_probs=137.7
Q ss_pred cCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccc-hHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
++|...+.||+|+||.||+|.. .+++.||||++...... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5788899999999999999987 56899999998643221 112356889999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||+ +|+|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 89 E~~-~g~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 89 EYA-GGELFDYIVE----KKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp CCC-CEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred ECC-CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 999 7899999863 35689999999999999999999999 999999999999999999999999999997655
Q ss_pred Ccc-ccccCCC
Q 008121 568 TER-QVITGTS 577 (577)
Q Consensus 568 ~~~-~~~~Gt~ 577 (577)
... ...+||+
T Consensus 161 ~~~~~~~~gt~ 171 (336)
T 3h4j_B 161 GNFLKTSCGSP 171 (336)
T ss_dssp SBTTCCCTTST
T ss_pred CcccccccCCc
Confidence 432 4455664
No 64
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.94 E-value=4.8e-27 Score=234.95 Aligned_cols=150 Identities=27% Similarity=0.387 Sum_probs=133.8
Q ss_pred cCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEEe
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 489 (577)
++|...+.||+|+||.||+|...+++.||+|++..........+.+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 46788899999999999999988899999999975543333346788999999999999999999999999999999999
Q ss_pred cCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccC
Q 008121 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (577)
Q Consensus 490 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~ 566 (577)
+++ +|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 82 ~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 151 (288)
T 1ob3_A 82 LDQ-DLKKLLDV---CEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFG 151 (288)
T ss_dssp CSE-EHHHHHHT---STTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHC
T ss_pred cCC-CHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccC
Confidence 975 99998863 345689999999999999999999999 99999999999999999999999999998654
No 65
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.94 E-value=9.2e-27 Score=248.56 Aligned_cols=161 Identities=25% Similarity=0.451 Sum_probs=140.3
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccc-hHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
++|...+.||+|+||.||+|... +|+.||||++...... ......+.+|+.+++.++||||+++++++...+..|+||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 46788899999999999999875 6899999999654221 123567899999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||+++|+|.+++. ....+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 96 E~~~gg~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 96 EYVSGGELFDYIC----KNGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp ECCSSEEHHHHTT----SSSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred eCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 9999999999996 346799999999999999999999999 999999999999999999999999999998755
Q ss_pred Cc-cccccCCC
Q 008121 568 TE-RQVITGTS 577 (577)
Q Consensus 568 ~~-~~~~~Gt~ 577 (577)
.. ....+||+
T Consensus 169 ~~~~~~~~gt~ 179 (476)
T 2y94_A 169 GEFLRTSCGSP 179 (476)
T ss_dssp TCCBCCCCSCS
T ss_pred cccccccCCCc
Confidence 43 24556664
No 66
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.94 E-value=1.3e-26 Score=236.15 Aligned_cols=161 Identities=24% Similarity=0.336 Sum_probs=138.5
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccch----HHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL----QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 484 (577)
+.|...+.||+|+||.||+|... +++.||+|.++...... ...+.+.+|+.++++++||||+++++++...+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45788899999999999999875 58999999986543211 13567899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC----CeEEeccc
Q 008121 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL----NPHLSDCG 560 (577)
Q Consensus 485 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~----~~kl~DFG 560 (577)
+||||+++|+|.+++. ....+++.++..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||
T Consensus 91 lv~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 91 LILELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEECCCSCBHHHHHT----TSSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEcCCCCCHHHHHH----hcCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 9999999999999996 345799999999999999999999999 999999999999999887 89999999
Q ss_pred cCcccCCCc-cccccCCC
Q 008121 561 LAALTPNTE-RQVITGTS 577 (577)
Q Consensus 561 la~~~~~~~-~~~~~Gt~ 577 (577)
+++...... .....||+
T Consensus 164 ~a~~~~~~~~~~~~~gt~ 181 (326)
T 2y0a_A 164 LAHKIDFGNEFKNIFGTP 181 (326)
T ss_dssp TCEECCTTSCCCCCCSCT
T ss_pred CCeECCCCCccccccCCc
Confidence 999775332 33445664
No 67
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.94 E-value=8.9e-27 Score=234.13 Aligned_cols=152 Identities=22% Similarity=0.360 Sum_probs=128.4
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccch------------------------HHHHHHHHHHHHhh
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL------------------------QEEDNFLEAVSNMS 463 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~------------------------~~~~~~~~e~~~l~ 463 (577)
.++|...+.||+|+||.||+|... +++.||||++....... ...+++.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 357888999999999999999764 58899999986542111 12356889999999
Q ss_pred cCCCCceeeEeeEEEe--CCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCC
Q 008121 464 RLRHPNIVTLAGYCAE--HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNF 541 (577)
Q Consensus 464 ~l~H~niv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDl 541 (577)
+++||||+++++++.+ .+..++||||+++|+|.+++. ...+++.++..++.|+++||+|||+. +|+||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dl 163 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-----LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDI 163 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence 9999999999999986 568899999999999988663 45799999999999999999999999 9999999
Q ss_pred CCCCeeeCCCCCeEEeccccCcccCCC
Q 008121 542 KSANILLDDELNPHLSDCGLAALTPNT 568 (577)
Q Consensus 542 k~~NILl~~~~~~kl~DFGla~~~~~~ 568 (577)
||+|||++.++.+||+|||+++.....
T Consensus 164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~ 190 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADFGVSNEFKGS 190 (298)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred CHHHEEECCCCCEEEecCCCccccccc
Confidence 999999999999999999999876544
No 68
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.94 E-value=6.9e-27 Score=242.37 Aligned_cols=162 Identities=28% Similarity=0.382 Sum_probs=130.3
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccc-hHHHHHHHHHHHH-hhcCCCCceeeEeeEEEeCCeEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSN-MSRLRHPNIVTLAGYCAEHGQRLL 485 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~-l~~l~H~niv~l~~~~~~~~~~~l 485 (577)
.++|...+.||+|+||.||+|+.. +++.||+|++++.... ......+.+|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 356888999999999999999875 4789999999755332 2334556677776 577899999999999999999999
Q ss_pred EEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCccc
Q 008121 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (577)
Q Consensus 486 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~ 565 (577)
||||+++|+|.++++. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 117 v~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 117 VLDYINGGELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 9999999999999973 35688999999999999999999999 9999999999999999999999999999864
Q ss_pred C--CCccccccCCC
Q 008121 566 P--NTERQVITGTS 577 (577)
Q Consensus 566 ~--~~~~~~~~Gt~ 577 (577)
. .......+||+
T Consensus 190 ~~~~~~~~~~~gt~ 203 (373)
T 2r5t_A 190 IEHNSTTSTFCGTP 203 (373)
T ss_dssp BCCCCCCCSBSCCC
T ss_pred ccCCCccccccCCc
Confidence 3 23345567775
No 69
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.94 E-value=1.2e-26 Score=250.80 Aligned_cols=166 Identities=23% Similarity=0.334 Sum_probs=143.4
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccc-hHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 486 (577)
.++|...+.||+|+||.||+|+.. +|+.||+|++...... ....+.+.+|++++++++||||+++++++...+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 367888899999999999999875 5899999999654321 12356788999999999999999999999999999999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccC
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~ 566 (577)
|||+++|+|.+++.........+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999999975444456799999999999999999999999 99999999999999999999999999999875
Q ss_pred CCcc--ccccCCC
Q 008121 567 NTER--QVITGTS 577 (577)
Q Consensus 567 ~~~~--~~~~Gt~ 577 (577)
.... ...+||+
T Consensus 341 ~~~~~~~~~~GT~ 353 (543)
T 3c4z_A 341 AGQTKTKGYAGTP 353 (543)
T ss_dssp TTCCCBCCCCSCT
T ss_pred CCCcccccccCCc
Confidence 5443 3457775
No 70
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.94 E-value=6.7e-27 Score=233.09 Aligned_cols=151 Identities=25% Similarity=0.416 Sum_probs=133.2
Q ss_pred hcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 488 (577)
.++|...+.||+|+||.||+|.+.++..||+|+++.... ..+++.+|++++.+++||||+++++++...+..++|||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC---CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 456788899999999999999999899999999975432 34568999999999999999999999999999999999
Q ss_pred ecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCCC
Q 008121 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (577)
Q Consensus 489 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~~ 568 (577)
|+++|+|.++++. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 100 ~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 100 YMANGCLLNYLRE---MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp CCTTCBHHHHHHC---GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred ccCCCcHHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence 9999999999963 235689999999999999999999999 9999999999999999999999999999876543
No 71
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.94 E-value=1.2e-26 Score=231.31 Aligned_cols=157 Identities=25% Similarity=0.362 Sum_probs=138.0
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcC-CCCceeeEeeEEEeCCeEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 486 (577)
.++|...+.||+|+||.||+|... +++.||||+++..........++.+|+..+.++ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 467888999999999999999875 689999999976544455677889999999999 999999999999999999999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC----------------
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---------------- 550 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~---------------- 550 (577)
|||+++|+|.+++.........+++.++..|+.|++.||+|||+. +|+||||||+|||++.
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 999999999999975433346789999999999999999999999 9999999999999984
Q ss_pred ---CCCeEEeccccCcccCCC
Q 008121 551 ---ELNPHLSDCGLAALTPNT 568 (577)
Q Consensus 551 ---~~~~kl~DFGla~~~~~~ 568 (577)
...+||+|||+++.....
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~ 187 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSP 187 (289)
T ss_dssp ---CCCEEECCCTTCEETTCS
T ss_pred cCCceEEEEcccccccccCCc
Confidence 447999999999976544
No 72
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.94 E-value=4e-26 Score=230.25 Aligned_cols=166 Identities=34% Similarity=0.602 Sum_probs=146.3
Q ss_pred ceeecHHHHHHhhcCCCcc------ceeccCccceEEEEEEcCCcEEEEEEccccc--cchHHHHHHHHHHHHhhcCCCC
Q 008121 397 ATSYTVASLQTATNSFSQE------FLIGEGSLGRVYRAEFANGKIMAVKKIDNAA--LSLQEEDNFLEAVSNMSRLRHP 468 (577)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~------~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~e~~~l~~l~H~ 468 (577)
...|+..++..++++|... +.||+|+||.||+|.. +++.||||++.... ......+.|.+|+.++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 3568889999999998877 8999999999999986 58899999986432 1233467799999999999999
Q ss_pred ceeeEeeEEEeCCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee
Q 008121 469 NIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL 548 (577)
Q Consensus 469 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl 548 (577)
||+++++++...+..++||||+++|+|.+++.... ....+++..+..|+.|++.||+|||+. +|+||||||+||++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili 166 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILL 166 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGG-GCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEE
Confidence 99999999999999999999999999999996432 245689999999999999999999999 99999999999999
Q ss_pred CCCCCeEEeccccCcccCC
Q 008121 549 DDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 549 ~~~~~~kl~DFGla~~~~~ 567 (577)
++++.+||+|||+++....
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~ 185 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEK 185 (307)
T ss_dssp CTTCCEEECCCTTCEECCS
T ss_pred cCCCcEEEeeccccccccc
Confidence 9999999999999987654
No 73
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.94 E-value=1.1e-26 Score=251.67 Aligned_cols=165 Identities=27% Similarity=0.348 Sum_probs=141.9
Q ss_pred hhcCCCccceeccCccceEEEEEEc-CCcEEEEEEcccccc-chHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEE
Q 008121 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (577)
Q Consensus 408 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 485 (577)
..++|...+.||+|+||.||+|... +|+.||+|++..... .......+.+|++++++++|||||++++++.+.+..|+
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 3467888999999999999999875 689999999865422 12235668899999999999999999999999999999
Q ss_pred EEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCccc
Q 008121 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (577)
Q Consensus 486 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~ 565 (577)
||||+++|+|.+++... ....+++..+..++.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+..
T Consensus 262 VmEy~~gg~L~~~l~~~--~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~ 336 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHM--GQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV 336 (576)
T ss_dssp EECCCCSCBHHHHHHSS--SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceec
Confidence 99999999999999632 234589999999999999999999999 9999999999999999999999999999987
Q ss_pred CCCcc-ccccCCC
Q 008121 566 PNTER-QVITGTS 577 (577)
Q Consensus 566 ~~~~~-~~~~Gt~ 577 (577)
..... ...+||+
T Consensus 337 ~~~~~~~~~~GT~ 349 (576)
T 2acx_A 337 PEGQTIKGRVGTV 349 (576)
T ss_dssp CTTCCEECCCSCG
T ss_pred ccCccccccCCCc
Confidence 65443 4456774
No 74
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.94 E-value=1.1e-26 Score=236.38 Aligned_cols=151 Identities=26% Similarity=0.394 Sum_probs=130.7
Q ss_pred hcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCC----eEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG----QRL 484 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~----~~~ 484 (577)
.++|...+.||+|+||.||+|++. ++.||||+++.. ......+.+|+.++++++||||+++++++.... ..+
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 98 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ---DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecC---chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence 467888999999999999999876 799999998643 234455677999999999999999999998754 479
Q ss_pred EEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-------CCCeeecCCCCCCeeeCCCCCeEEe
Q 008121 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC-------LPSVVHRNFKSANILLDDELNPHLS 557 (577)
Q Consensus 485 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~-------~~~ivHrDlk~~NILl~~~~~~kl~ 557 (577)
+||||+++|+|.++++. ..+++..+..|+.|+++||+|||+.+ .++|+||||||+|||++.++.+||+
T Consensus 99 lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~ 173 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173 (322)
T ss_dssp EEEECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEc
Confidence 99999999999999963 35899999999999999999999861 2379999999999999999999999
Q ss_pred ccccCcccCCC
Q 008121 558 DCGLAALTPNT 568 (577)
Q Consensus 558 DFGla~~~~~~ 568 (577)
|||+++.....
T Consensus 174 DFg~a~~~~~~ 184 (322)
T 3soc_A 174 DFGLALKFEAG 184 (322)
T ss_dssp CCTTCEEECTT
T ss_pred cCCcccccccc
Confidence 99999876543
No 75
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.94 E-value=7e-27 Score=251.76 Aligned_cols=153 Identities=25% Similarity=0.471 Sum_probs=136.7
Q ss_pred hcCCCccceeccCccceEEEEEEcC-CcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
..+|...+.||+|+||.||+|.+.. +..||||+++... ...++|.+|+++|++++|||||+++++|...+..++||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc---cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 3567778899999999999998865 8899999997543 23567999999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||+++|+|.++++.. ....+++..++.|+.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 296 E~~~~g~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 370 (495)
T 1opk_A 296 EFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTG 370 (495)
T ss_dssp ECCTTCBHHHHHHHS--CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred EccCCCCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence 999999999999742 345689999999999999999999999 999999999999999999999999999998755
Q ss_pred Cc
Q 008121 568 TE 569 (577)
Q Consensus 568 ~~ 569 (577)
..
T Consensus 371 ~~ 372 (495)
T 1opk_A 371 DT 372 (495)
T ss_dssp CC
T ss_pred Cc
Confidence 43
No 76
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.94 E-value=8.3e-27 Score=236.00 Aligned_cols=160 Identities=26% Similarity=0.287 Sum_probs=132.8
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcC-CCCceeeEeeEEEeCCeEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 487 (577)
++|...+.||+|+||+||+|... +++.||||++...........++..|+..+.++ +||||++++++|.+.+..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 56888999999999999999876 689999999865544444555566666666555 8999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||+ +|+|.+++... ...+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 137 e~~-~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp ECC-CCBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred ecc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 999 67999988643 35699999999999999999999999 999999999999999999999999999987654
Q ss_pred Ccc-ccccCC
Q 008121 568 TER-QVITGT 576 (577)
Q Consensus 568 ~~~-~~~~Gt 576 (577)
... ....||
T Consensus 210 ~~~~~~~~gt 219 (311)
T 3p1a_A 210 AGAGEVQEGD 219 (311)
T ss_dssp -----CCCCC
T ss_pred CCCCcccCCC
Confidence 433 233355
No 77
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.94 E-value=1.1e-26 Score=238.16 Aligned_cols=157 Identities=28% Similarity=0.452 Sum_probs=137.8
Q ss_pred HHhhcCCCccceeccCccceEEEEEEc------CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEe
Q 008121 406 QTATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE 479 (577)
Q Consensus 406 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~ 479 (577)
....++|...+.||+|+||.||+|... +++.||||+++... .....+.|.+|++++++++||||+++++++..
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 345678999999999999999999875 34889999997543 34456789999999999999999999999999
Q ss_pred CCeEEEEEEecCCCCHHHhhhhccCC--------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 008121 480 HGQRLLVYEYVGNGNLHDMLHFADDS--------------------SKNLTWNARVRVALGTARALEYLHEVCLPSVVHR 539 (577)
Q Consensus 480 ~~~~~lv~e~~~~g~L~~~l~~~~~~--------------------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHr 539 (577)
.+..++||||+++|+|.++++..... ...+++.+++.|+.|+++||+|||+. +|+||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~ 198 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHR 198 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecC
Confidence 99999999999999999999753211 25789999999999999999999999 99999
Q ss_pred CCCCCCeeeCCCCCeEEeccccCcccC
Q 008121 540 NFKSANILLDDELNPHLSDCGLAALTP 566 (577)
Q Consensus 540 Dlk~~NILl~~~~~~kl~DFGla~~~~ 566 (577)
||||+|||++.++.+||+|||+++...
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 225 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIY 225 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHT
T ss_pred CCCcceEEECCCCeEEEeecCCCcccc
Confidence 999999999999999999999998654
No 78
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.94 E-value=1.1e-26 Score=248.02 Aligned_cols=149 Identities=23% Similarity=0.378 Sum_probs=124.4
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeC-----CeE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH-----GQR 483 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~~ 483 (577)
++|...+.||+|+||.||+|... +++.||||++..........+++.+|++++++++|||||++++++... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 57888999999999999999764 689999999976544555677899999999999999999999998543 568
Q ss_pred EEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCc
Q 008121 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (577)
Q Consensus 484 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~ 563 (577)
|+||||+ +|+|.++++ ....+++..+..|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+
T Consensus 133 ~lv~e~~-~~~L~~~~~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~ 204 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFR----TPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLAR 204 (458)
T ss_dssp EEEECCC-SEEHHHHHH----SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred EEEEecc-ccchhhhcc----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccch
Confidence 9999998 579999986 446799999999999999999999999 99999999999999999999999999999
Q ss_pred ccC
Q 008121 564 LTP 566 (577)
Q Consensus 564 ~~~ 566 (577)
...
T Consensus 205 ~~~ 207 (458)
T 3rp9_A 205 TVD 207 (458)
T ss_dssp CTT
T ss_pred hcc
Confidence 765
No 79
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.94 E-value=2.4e-26 Score=240.17 Aligned_cols=152 Identities=22% Similarity=0.293 Sum_probs=137.5
Q ss_pred hcCCCccceeccC--ccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEE
Q 008121 409 TNSFSQEFLIGEG--SLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (577)
Q Consensus 409 ~~~~~~~~~lg~G--~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 485 (577)
.++|...+.||+| +||.||+|... +++.||||+++.........+.+.+|+++++.++|||||++++++...+..|+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4568889999999 99999999875 68999999997665555667788999999999999999999999999999999
Q ss_pred EEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCccc
Q 008121 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (577)
Q Consensus 486 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~ 565 (577)
||||+++|+|.+++... ....+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||.+...
T Consensus 104 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTH--FMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEECCTTCBHHHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEccCCCCHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 99999999999999732 335689999999999999999999999 9999999999999999999999999998754
No 80
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.94 E-value=5.4e-27 Score=250.03 Aligned_cols=152 Identities=22% Similarity=0.415 Sum_probs=134.4
Q ss_pred hhcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 408 ~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
..++|...+.||+|+||.||+|.+.++..||||+++... ...++|.+|+++|++++|||||++++++. .+..++||
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~ 261 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIIT 261 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC---ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEE
Confidence 345677889999999999999999889999999997543 23567999999999999999999999986 56789999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||+++|+|.++++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 262 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~ 336 (454)
T 1qcf_A 262 EFMAKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED 336 (454)
T ss_dssp CCCTTCBHHHHHHSH--HHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred eecCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence 999999999999732 123578999999999999999999999 999999999999999999999999999997654
Q ss_pred C
Q 008121 568 T 568 (577)
Q Consensus 568 ~ 568 (577)
.
T Consensus 337 ~ 337 (454)
T 1qcf_A 337 N 337 (454)
T ss_dssp H
T ss_pred C
Confidence 3
No 81
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.94 E-value=2.6e-26 Score=232.05 Aligned_cols=151 Identities=26% Similarity=0.403 Sum_probs=135.7
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 488 (577)
++|...+.||+|+||.||+|... +++.||||++..........+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 56888899999999999999875 48999999987655445556778999999999999999999999999999999999
Q ss_pred ecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 489 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
|+++++|.++++ ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 83 ~~~~~~l~~~~~----~~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 154 (311)
T 4agu_A 83 YCDHTVLHELDR----YQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTG 154 (311)
T ss_dssp CCSEEHHHHHHH----TSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred eCCCchHHHHHh----hhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence 999999998886 345689999999999999999999999 999999999999999999999999999987653
No 82
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.94 E-value=2.6e-26 Score=233.07 Aligned_cols=163 Identities=25% Similarity=0.382 Sum_probs=137.3
Q ss_pred hcCCCccceeccCccceEEEEEEcC-CcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCC--eEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG--QRLL 485 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~l 485 (577)
.++|...+.||+|+||.||+|.... ++.||||+++.... ....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence 3568888999999999999998754 89999999975432 233567889999999999999999999998765 7899
Q ss_pred EEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----CCCCCeEEecccc
Q 008121 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL----DDELNPHLSDCGL 561 (577)
Q Consensus 486 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl----~~~~~~kl~DFGl 561 (577)
||||+++|+|.++++... ....+++.++..|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+
T Consensus 87 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 87 IMEFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp EEECCTTCBHHHHHHSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred EEeCCCCCCHHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 999999999999997432 233489999999999999999999999 99999999999999 7888899999999
Q ss_pred CcccCCCcc-ccccCC
Q 008121 562 AALTPNTER-QVITGT 576 (577)
Q Consensus 562 a~~~~~~~~-~~~~Gt 576 (577)
++....... ....||
T Consensus 163 a~~~~~~~~~~~~~gt 178 (319)
T 4euu_A 163 ARELEDDEQFVSLYGT 178 (319)
T ss_dssp CEECCTTCCBCCCCSC
T ss_pred ceecCCCCceeecccC
Confidence 997655443 234455
No 83
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.94 E-value=2.3e-26 Score=239.71 Aligned_cols=155 Identities=26% Similarity=0.449 Sum_probs=135.8
Q ss_pred hcCCCccceeccCccceEEEEEEc--------CCcEEEEEEccccccchHHHHHHHHHHHHhhcC-CCCceeeEeeEEEe
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA--------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAE 479 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~ 479 (577)
.++|...+.||+|+||.||+|+.. ++..||||+++... ......++.+|+++++++ +||||+++++++..
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc-CHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 457888899999999999999763 23579999997543 345567899999999999 99999999999999
Q ss_pred CCeEEEEEEecCCCCHHHhhhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCee
Q 008121 480 HGQRLLVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANIL 547 (577)
Q Consensus 480 ~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIL 547 (577)
.+..++||||+++|+|.+++..... ....+++.++..|+.|++.||+|||+. +|+||||||+|||
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEE
Confidence 9999999999999999999975321 124689999999999999999999999 9999999999999
Q ss_pred eCCCCCeEEeccccCcccCC
Q 008121 548 LDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 548 l~~~~~~kl~DFGla~~~~~ 567 (577)
+++++.+||+|||+++....
T Consensus 224 l~~~~~~kL~DFG~a~~~~~ 243 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHH 243 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSC
T ss_pred EcCCCcEEEcccCccccccc
Confidence 99999999999999997654
No 84
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.94 E-value=8.3e-27 Score=240.65 Aligned_cols=163 Identities=23% Similarity=0.398 Sum_probs=137.8
Q ss_pred HHHHHHhhcCCCccceeccCccceEEEEEE------cCCcEEEEEEccccccchHHHHHHHHHHHHhhcC-CCCceeeEe
Q 008121 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEF------ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLA 474 (577)
Q Consensus 402 ~~~~~~~~~~~~~~~~lg~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~ 474 (577)
........++|...+.||+|+||.||+|++ .+++.||||+++... .....+.+.+|++++.++ +||||++++
T Consensus 14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC-CHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 344455678899999999999999999974 245789999997543 344567799999999999 799999999
Q ss_pred eEEEeCC-eEEEEEEecCCCCHHHhhhhccCC------------------------------------------------
Q 008121 475 GYCAEHG-QRLLVYEYVGNGNLHDMLHFADDS------------------------------------------------ 505 (577)
Q Consensus 475 ~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~------------------------------------------------ 505 (577)
+++...+ ..++||||+++|+|.++++.....
T Consensus 93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (359)
T 3vhe_A 93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS 172 (359)
T ss_dssp EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence 9998765 489999999999999999743221
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCCC
Q 008121 506 --------------SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (577)
Q Consensus 506 --------------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~~ 568 (577)
...+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 246 (359)
T 3vhe_A 173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246 (359)
T ss_dssp -----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSC
T ss_pred cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccc
Confidence 12289999999999999999999999 9999999999999999999999999999876443
No 85
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.94 E-value=3.4e-26 Score=228.88 Aligned_cols=160 Identities=24% Similarity=0.349 Sum_probs=139.0
Q ss_pred CCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEe----CCeEEE
Q 008121 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE----HGQRLL 485 (577)
Q Consensus 411 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~~l 485 (577)
.|...+.||+|+||.||+|... ++..||+|++..........+.+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 3566778999999999999774 57889999997666566677889999999999999999999999865 346899
Q ss_pred EEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeeC-CCCCeEEeccccC
Q 008121 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS--VVHRNFKSANILLD-DELNPHLSDCGLA 562 (577)
Q Consensus 486 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~--ivHrDlk~~NILl~-~~~~~kl~DFGla 562 (577)
||||+++|+|.+++.. ...+++..+..|+.|++.||+|||+. + |+||||||+|||++ +++.+||+|||++
T Consensus 107 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~ 179 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EEEecCCCCHHHHHHH----ccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence 9999999999999963 35689999999999999999999998 6 99999999999998 7899999999999
Q ss_pred cccCCCccccccCCC
Q 008121 563 ALTPNTERQVITGTS 577 (577)
Q Consensus 563 ~~~~~~~~~~~~Gt~ 577 (577)
............||+
T Consensus 180 ~~~~~~~~~~~~~t~ 194 (290)
T 1t4h_A 180 TLKRASFAKAVIGTP 194 (290)
T ss_dssp GGCCTTSBEESCSSC
T ss_pred ccccccccccccCCc
Confidence 877666666666663
No 86
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.94 E-value=7e-28 Score=246.61 Aligned_cols=150 Identities=18% Similarity=0.225 Sum_probs=124.1
Q ss_pred hcCCCccceeccCccceEEEEEEcCCcEEEEEEcccccc------chHHHHHHHHHHHHhhcCC---------CCceeeE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAAL------SLQEEDNFLEAVSNMSRLR---------HPNIVTL 473 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~e~~~l~~l~---------H~niv~l 473 (577)
.++|...+.||+|+||+||+|.. +|+.||||+++.... .....+.+.+|+++++.++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35677889999999999999987 689999999975421 1223466888888888875 7777777
Q ss_pred eeEEE-----------------e-------------CCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHH
Q 008121 474 AGYCA-----------------E-------------HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR 523 (577)
Q Consensus 474 ~~~~~-----------------~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~ 523 (577)
.+.+. + .+..|+||||+++|++.+.+. ...+++.++..|+.||+.
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~-----~~~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR-----TKLSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT-----TTCCCHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH-----hcCCCHHHHHHHHHHHHH
Confidence 66542 2 678999999999998777763 256899999999999999
Q ss_pred HHHHHh-cCCCCCeeecCCCCCCeeeCCCC--------------------CeEEeccccCcccCC
Q 008121 524 ALEYLH-EVCLPSVVHRNFKSANILLDDEL--------------------NPHLSDCGLAALTPN 567 (577)
Q Consensus 524 ~L~yLH-~~~~~~ivHrDlk~~NILl~~~~--------------------~~kl~DFGla~~~~~ 567 (577)
||+||| +. +|+||||||+|||++.++ .+||+|||+|+....
T Consensus 173 aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~ 234 (336)
T 2vuw_A 173 SLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD 234 (336)
T ss_dssp HHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET
T ss_pred HHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC
Confidence 999999 88 999999999999999887 899999999997654
No 87
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.94 E-value=3.1e-26 Score=230.19 Aligned_cols=147 Identities=27% Similarity=0.424 Sum_probs=125.9
Q ss_pred hcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhc--CCCCceeeEeeEEEeC----Ce
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR--LRHPNIVTLAGYCAEH----GQ 482 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~----~~ 482 (577)
.++|...+.||+|+||.||+|.+ +++.||||++... ....+.+|.+++.. ++||||+++++++... ..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~ 80 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ 80 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence 46788899999999999999987 6899999998643 33445666666655 8999999999987543 45
Q ss_pred EEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCeeecCCCCCCeeeCCCCCe
Q 008121 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH--------EVCLPSVVHRNFKSANILLDDELNP 554 (577)
Q Consensus 483 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH--------~~~~~~ivHrDlk~~NILl~~~~~~ 554 (577)
.++||||+++|+|.++++ ...+++..+.+|+.|++.||+||| +. +|+||||||+|||++.++.+
T Consensus 81 ~~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~ 152 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQC 152 (301)
T ss_dssp EEEEECCCTTCBHHHHHT-----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCE
T ss_pred eEEehhhccCCCHHHHHh-----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCE
Confidence 899999999999999995 356999999999999999999999 76 99999999999999999999
Q ss_pred EEeccccCcccCCCc
Q 008121 555 HLSDCGLAALTPNTE 569 (577)
Q Consensus 555 kl~DFGla~~~~~~~ 569 (577)
||+|||+|+......
T Consensus 153 kl~Dfg~a~~~~~~~ 167 (301)
T 3q4u_A 153 CIADLGLAVMHSQST 167 (301)
T ss_dssp EECCCTTCEEEETTT
T ss_pred EEeeCCCeeeccccc
Confidence 999999998654433
No 88
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.94 E-value=6.2e-27 Score=249.11 Aligned_cols=162 Identities=25% Similarity=0.358 Sum_probs=129.4
Q ss_pred hcCCCccceeccCccceEEEEEE-cCCcEEEEEEcccccc-chHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 486 (577)
.++|...+.||+|+||.||+|.. .+++.||||+++.... .......+.+|+++++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 35788899999999999999976 4689999999865422 233456688999999999999999999999999999999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeeCCCCCeEEeccccCccc
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE-VCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~-~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~ 565 (577)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+|+..
T Consensus 227 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 227 MEYANGGELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp ECCCSSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EeeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 999999999999963 3568999999999999999999998 7 8999999999999999999999999999864
Q ss_pred CCCc--cccccCCC
Q 008121 566 PNTE--RQVITGTS 577 (577)
Q Consensus 566 ~~~~--~~~~~Gt~ 577 (577)
.... ....+||+
T Consensus 300 ~~~~~~~~~~~gt~ 313 (446)
T 4ejn_A 300 IKDGATMKTFCGTP 313 (446)
T ss_dssp CC-----CCSSSCG
T ss_pred cCCCcccccccCCc
Confidence 3332 24455663
No 89
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.94 E-value=1.6e-26 Score=238.98 Aligned_cols=158 Identities=22% Similarity=0.316 Sum_probs=129.4
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
.++|...+.||+|+||.||++... +++.||||++.... ...+.+.+|+.++++++||||+++++++...+..++||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 95 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA---AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST---TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc---cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence 457888999999999999999875 68999999986532 22355889999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC--eEEeccccCccc
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN--PHLSDCGLAALT 565 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~--~kl~DFGla~~~ 565 (577)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++..
T Consensus 96 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~ 168 (361)
T 3uc3_A 96 EYASGGELYERICN----AGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168 (361)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred EeCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence 99999999999963 34689999999999999999999999 9999999999999987765 999999999854
Q ss_pred CCCc-cccccCC
Q 008121 566 PNTE-RQVITGT 576 (577)
Q Consensus 566 ~~~~-~~~~~Gt 576 (577)
.... .....||
T Consensus 169 ~~~~~~~~~~gt 180 (361)
T 3uc3_A 169 VLHSQPKSTVGT 180 (361)
T ss_dssp ------------
T ss_pred cccCCCCCCcCC
Confidence 3222 2334455
No 90
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.94 E-value=4.9e-26 Score=237.10 Aligned_cols=161 Identities=22% Similarity=0.350 Sum_probs=138.4
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
.++|...+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 127 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL 127 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc--hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEE
Confidence 357888999999999999999775 58899999986432 334567899999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC--CCCeEEeccccCccc
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD--ELNPHLSDCGLAALT 565 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~--~~~~kl~DFGla~~~ 565 (577)
||+++|+|.+++. .....+++.++..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++..
T Consensus 128 E~~~gg~L~~~l~---~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 128 EFLSGGELFDRIA---AEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp ECCCCCBHHHHTT---CTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EcCCCCcHHHHHH---hhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceec
Confidence 9999999999985 2345799999999999999999999999 9999999999999974 578999999999987
Q ss_pred CCCcc-ccccCCC
Q 008121 566 PNTER-QVITGTS 577 (577)
Q Consensus 566 ~~~~~-~~~~Gt~ 577 (577)
..... ...+||+
T Consensus 202 ~~~~~~~~~~gt~ 214 (387)
T 1kob_A 202 NPDEIVKVTTATA 214 (387)
T ss_dssp CTTSCEEEECSSG
T ss_pred CCCcceeeeccCC
Confidence 55433 3445653
No 91
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.94 E-value=2.8e-26 Score=231.95 Aligned_cols=156 Identities=28% Similarity=0.471 Sum_probs=136.0
Q ss_pred hcCCCccceeccCccceEEEEEE------cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCe
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF------ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 482 (577)
.++|...+.||+|+||.||+|.. .+++.||||+++... .....+++.+|++++++++||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 45688889999999999999976 235789999997543 34556789999999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHhhhhccC--------------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 008121 483 RLLVYEYVGNGNLHDMLHFADD--------------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFK 542 (577)
Q Consensus 483 ~~lv~e~~~~g~L~~~l~~~~~--------------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk 542 (577)
.++||||+++|+|.+++..... ....+++.++..++.|+++||+|||+. +|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccc
Confidence 9999999999999999975332 123589999999999999999999999 99999999
Q ss_pred CCCeeeCCCCCeEEeccccCcccCCC
Q 008121 543 SANILLDDELNPHLSDCGLAALTPNT 568 (577)
Q Consensus 543 ~~NILl~~~~~~kl~DFGla~~~~~~ 568 (577)
|+||++++++.+||+|||+++.....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~ 203 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEE 203 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTT
T ss_pred hheEEEcCCCCEEEcccccccccccc
Confidence 99999999999999999999876543
No 92
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.94 E-value=9.4e-27 Score=233.56 Aligned_cols=152 Identities=24% Similarity=0.455 Sum_probs=130.5
Q ss_pred hcCCCccceeccCccceEEEEEE-----cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeC--C
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF-----ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--G 481 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~ 481 (577)
.++|+..+.||+|+||.||+|++ .+++.||||++... .....+.|.+|++++++++||||+++++++... .
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 35678889999999999999985 35889999998754 345567899999999999999999999998653 4
Q ss_pred eEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEecccc
Q 008121 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (577)
Q Consensus 482 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGl 561 (577)
..++||||+++|+|.+++... ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred ceEEEEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 689999999999999999632 34589999999999999999999999 999999999999999999999999999
Q ss_pred CcccCCC
Q 008121 562 AALTPNT 568 (577)
Q Consensus 562 a~~~~~~ 568 (577)
++.....
T Consensus 161 ~~~~~~~ 167 (295)
T 3ugc_A 161 TKVLPQD 167 (295)
T ss_dssp CC-----
T ss_pred cccccCC
Confidence 9976543
No 93
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.94 E-value=1.8e-26 Score=229.60 Aligned_cols=161 Identities=29% Similarity=0.415 Sum_probs=134.5
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccc-hHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 486 (577)
.++|...+.||+|+||.||+|... +++.||+|++...... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 457888999999999999999775 4778999998643221 12256788999999999999999999999999999999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccC
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~ 566 (577)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 88 ~e~~~~~~l~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 88 LEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp ECCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred EecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 999999999999963 34689999999999999999999999 99999999999999999999999999998766
Q ss_pred CCccccccCC
Q 008121 567 NTERQVITGT 576 (577)
Q Consensus 567 ~~~~~~~~Gt 576 (577)
........||
T Consensus 161 ~~~~~~~~~~ 170 (279)
T 3fdn_A 161 SSRRTDLCGT 170 (279)
T ss_dssp -------CCC
T ss_pred cccccccCCC
Confidence 5555555555
No 94
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.94 E-value=2.6e-26 Score=243.16 Aligned_cols=152 Identities=24% Similarity=0.372 Sum_probs=133.7
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeC-----Ce
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH-----GQ 482 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~ 482 (577)
.++|...+.||+|+||.||+|... +++.||||++..........+++.+|++++++++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 357888999999999999999774 588999999976544455677899999999999999999999999766 57
Q ss_pred EEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccC
Q 008121 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (577)
Q Consensus 483 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla 562 (577)
.|+||||++ |+|.++++ ....+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+|
T Consensus 105 ~~lv~e~~~-~~L~~~~~----~~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFK----TPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEEECCS-EEHHHHHH----SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecCC-cCHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 899999996 69999996 346799999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCC
Q 008121 563 ALTPNT 568 (577)
Q Consensus 563 ~~~~~~ 568 (577)
+.....
T Consensus 177 ~~~~~~ 182 (432)
T 3n9x_A 177 RTINSE 182 (432)
T ss_dssp EEC---
T ss_pred cccccc
Confidence 976543
No 95
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.94 E-value=5.4e-26 Score=229.64 Aligned_cols=149 Identities=27% Similarity=0.463 Sum_probs=130.8
Q ss_pred hcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 488 (577)
.++|...+.||+|+||.||+|.+. ..+|+|.++.........+.|.+|++++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 457888999999999999999764 36899988765555566788999999999999999999999875 456899999
Q ss_pred ecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccC
Q 008121 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (577)
Q Consensus 489 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~ 566 (577)
|+++|+|.++++. ....+++.++..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 112 ~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~ 183 (307)
T 3lb7_A 112 WCEGSSLYKHLHV---QETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp CCSSCBHHHHHHT---SCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC--
T ss_pred cCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecc
Confidence 9999999999962 356799999999999999999999999 99999999999999999999999999998654
No 96
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.94 E-value=8.6e-27 Score=235.86 Aligned_cols=152 Identities=23% Similarity=0.330 Sum_probs=129.9
Q ss_pred hcCCCccceeccCccceEEEEEE-cCCcEEEEEEcccccc-chHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCC----e
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG----Q 482 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~----~ 482 (577)
.++|...+.||+|+||.||+|.. .+++.||||+++.... .......|.+|++++++++||||+++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 35788899999999999999986 5689999999975432 2334567899999999999999999999987654 3
Q ss_pred EEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccC
Q 008121 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (577)
Q Consensus 483 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla 562 (577)
.|+||||+++|+|.++++. ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 91 ~~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEECCCEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred cEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 4999999999999999973 34689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCC
Q 008121 563 ALTPN 567 (577)
Q Consensus 563 ~~~~~ 567 (577)
+....
T Consensus 164 ~~~~~ 168 (311)
T 3ork_A 164 RAIAD 168 (311)
T ss_dssp -----
T ss_pred ccccc
Confidence 87654
No 97
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.93 E-value=2e-26 Score=230.06 Aligned_cols=156 Identities=25% Similarity=0.334 Sum_probs=133.7
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 488 (577)
++|...+.||+|+||.||++... +++.||+|++.... .....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR-SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG-CCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc-cchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 46778899999999999999774 58899999986543 23345678999999999999999999999999999999999
Q ss_pred ecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---CCCCCeEEeccccCccc
Q 008121 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL---DDELNPHLSDCGLAALT 565 (577)
Q Consensus 489 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl---~~~~~~kl~DFGla~~~ 565 (577)
|+++|+|.+++.........+++..+..|+.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+++..
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 9999999999865433456799999999999999999999999 99999999999999 45688999999999876
Q ss_pred CCCc
Q 008121 566 PNTE 569 (577)
Q Consensus 566 ~~~~ 569 (577)
....
T Consensus 178 ~~~~ 181 (285)
T 3is5_A 178 KSDE 181 (285)
T ss_dssp ----
T ss_pred CCcc
Confidence 5433
No 98
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.93 E-value=1.1e-26 Score=240.87 Aligned_cols=153 Identities=25% Similarity=0.359 Sum_probs=133.1
Q ss_pred hcCCCccceeccCccceEEEEEEc------CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCe
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 482 (577)
.++|...+.||+|+||.||+|.+. +++.||||+++... ......++.+|+.++++++||||+++++++...+.
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 148 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 148 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc-ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 356788899999999999999853 46789999996532 34556679999999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC---CeEE
Q 008121 483 RLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL---NPHL 556 (577)
Q Consensus 483 ~~lv~e~~~~g~L~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~---~~kl 556 (577)
.++||||+++|+|.++++.... ....+++.+++.|+.|+++||+|||+. +|+||||||+|||++.++ .+||
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEE
Confidence 9999999999999999975432 234689999999999999999999999 999999999999999554 5999
Q ss_pred eccccCccc
Q 008121 557 SDCGLAALT 565 (577)
Q Consensus 557 ~DFGla~~~ 565 (577)
+|||+|+..
T Consensus 226 ~DFG~a~~~ 234 (367)
T 3l9p_A 226 GDFGMARDI 234 (367)
T ss_dssp CCCHHHHHH
T ss_pred CCCcccccc
Confidence 999999854
No 99
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.93 E-value=3.9e-26 Score=231.76 Aligned_cols=153 Identities=24% Similarity=0.378 Sum_probs=120.4
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
.++|...+.||+|+||.||+|... +++.||+|+++... .....+.+.+|++++++++||||+++++++..++..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS-EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS-TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc-ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 457888999999999999999764 58999999986443 2223456889999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCccc
Q 008121 488 EYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~ 565 (577)
||++ |+|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9998 69999986432 2234689999999999999999999999 9999999999999999999999999999876
Q ss_pred C
Q 008121 566 P 566 (577)
Q Consensus 566 ~ 566 (577)
.
T Consensus 159 ~ 159 (317)
T 2pmi_A 159 G 159 (317)
T ss_dssp T
T ss_pred C
Confidence 4
No 100
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.93 E-value=2.4e-26 Score=233.63 Aligned_cols=158 Identities=22% Similarity=0.449 Sum_probs=123.8
Q ss_pred HhhcCCCccceeccCccceEEEEEEcCC----cEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCe
Q 008121 407 TATNSFSQEFLIGEGSLGRVYRAEFANG----KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (577)
Q Consensus 407 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 482 (577)
...++|...+.||+|+||.||+|.+... ..||||+++.........++|.+|++++++++||||+++++++...+.
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 3456788999999999999999976543 279999997654445567889999999999999999999999987765
Q ss_pred E------EEEEEecCCCCHHHhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCe
Q 008121 483 R------LLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNP 554 (577)
Q Consensus 483 ~------~lv~e~~~~g~L~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~ 554 (577)
. ++||||+++|+|.+++.... .....+++.++..|+.|++.||+|||+. +|+||||||+|||+++++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 5 99999999999999996433 2233689999999999999999999999 99999999999999999999
Q ss_pred EEeccccCcccCC
Q 008121 555 HLSDCGLAALTPN 567 (577)
Q Consensus 555 kl~DFGla~~~~~ 567 (577)
||+|||+++....
T Consensus 177 kl~Dfg~a~~~~~ 189 (323)
T 3qup_A 177 CVADFGLSRKIYS 189 (323)
T ss_dssp EECCCCC------
T ss_pred EEeeccccccccc
Confidence 9999999987644
No 101
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.93 E-value=5.7e-26 Score=226.35 Aligned_cols=161 Identities=25% Similarity=0.378 Sum_probs=140.0
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
.++|...+.||+|+||.||+|... +++.||+|++..........+.+.+|+.++++++||||+++++++...+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 467888999999999999999775 5899999999766555666778999999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC---eEEeccccCcc
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN---PHLSDCGLAAL 564 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~---~kl~DFGla~~ 564 (577)
||+++|+|.+.+.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++..
T Consensus 85 e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 85 DLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp CCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred ecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 99999999998863 35689999999999999999999999 9999999999999986655 99999999987
Q ss_pred cCCCcc-ccccCC
Q 008121 565 TPNTER-QVITGT 576 (577)
Q Consensus 565 ~~~~~~-~~~~Gt 576 (577)
...... ....||
T Consensus 158 ~~~~~~~~~~~~~ 170 (284)
T 3kk8_A 158 VNDSEAWHGFAGT 170 (284)
T ss_dssp CCSSCBCCCSCSC
T ss_pred cccCccccCCCCC
Confidence 655443 233454
No 102
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.93 E-value=3.6e-26 Score=237.25 Aligned_cols=157 Identities=28% Similarity=0.402 Sum_probs=129.9
Q ss_pred CccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEEecC
Q 008121 413 SQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVG 491 (577)
Q Consensus 413 ~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 491 (577)
...+.||+|+||.||+|.. .+|+.||+|+++... ....++|.+|++++++++||||+++++++...+..++||||++
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~ 169 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG--MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVD 169 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc--cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 3356899999999999977 468999999987542 3456779999999999999999999999999999999999999
Q ss_pred CCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee--CCCCCeEEeccccCcccCCCc
Q 008121 492 NGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL--DDELNPHLSDCGLAALTPNTE 569 (577)
Q Consensus 492 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl--~~~~~~kl~DFGla~~~~~~~ 569 (577)
+|+|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+|||+ +.++.+||+|||+++......
T Consensus 170 ~~~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~ 243 (373)
T 2x4f_A 170 GGELFDRIID---ESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE 243 (373)
T ss_dssp TCEEHHHHHH---TGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC
T ss_pred CCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc
Confidence 9999998863 234689999999999999999999999 99999999999999 667899999999999875543
Q ss_pred c-ccccCCC
Q 008121 570 R-QVITGTS 577 (577)
Q Consensus 570 ~-~~~~Gt~ 577 (577)
. ....||+
T Consensus 244 ~~~~~~gt~ 252 (373)
T 2x4f_A 244 KLKVNFGTP 252 (373)
T ss_dssp BCCCCCSSC
T ss_pred ccccccCCC
Confidence 3 3344653
No 103
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.93 E-value=1.9e-26 Score=235.81 Aligned_cols=162 Identities=23% Similarity=0.321 Sum_probs=138.6
Q ss_pred hhcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccch------HHHHHHHHHHHHhhcCCCCceeeEeeEEEeC
Q 008121 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSL------QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH 480 (577)
Q Consensus 408 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~------~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~ 480 (577)
..++|...+.||+|+||.||+|.. .+++.||||+++...... .....+.+|++++++++||||+++++++...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 356788999999999999999976 568899999986543211 1334577899999999999999999999999
Q ss_pred CeEEEEEEecCCC-CHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEecc
Q 008121 481 GQRLLVYEYVGNG-NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559 (577)
Q Consensus 481 ~~~~lv~e~~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DF 559 (577)
+..++||||+.+| +|.+++. ....+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFID----RHPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHH----TCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred CEEEEEEEeCCCCccHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeec
Confidence 9999999999877 9999996 345699999999999999999999999 9999999999999999999999999
Q ss_pred ccCcccCCCcc-ccccCC
Q 008121 560 GLAALTPNTER-QVITGT 576 (577)
Q Consensus 560 Gla~~~~~~~~-~~~~Gt 576 (577)
|+++....... ...+||
T Consensus 175 g~a~~~~~~~~~~~~~gt 192 (335)
T 3dls_A 175 GSAAYLERGKLFYTFCGT 192 (335)
T ss_dssp TTCEECCTTCCBCEECSC
T ss_pred ccceECCCCCceeccCCC
Confidence 99997755433 344565
No 104
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.93 E-value=2.6e-26 Score=235.63 Aligned_cols=152 Identities=22% Similarity=0.287 Sum_probs=133.5
Q ss_pred hcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCC--CceeeEeeEEEeCCeEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH--PNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H--~niv~l~~~~~~~~~~~lv 486 (577)
.++|...+.||+|+||.||++...+++.||||++..........+.+.+|++++.+++| |||+++++++...+..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 35688889999999999999998889999999997655556667889999999999987 9999999999999999999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccC
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~ 566 (577)
|| +.+|+|.+++.. ...+++.++..|+.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+++...
T Consensus 88 ~e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EC-CCSEEHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred Ee-CCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 99 568899999973 45789999999999999999999999 999999999999997 5789999999999775
Q ss_pred CCc
Q 008121 567 NTE 569 (577)
Q Consensus 567 ~~~ 569 (577)
...
T Consensus 159 ~~~ 161 (343)
T 3dbq_A 159 PDT 161 (343)
T ss_dssp ---
T ss_pred ccc
Confidence 443
No 105
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.93 E-value=4e-26 Score=243.01 Aligned_cols=148 Identities=31% Similarity=0.485 Sum_probs=131.6
Q ss_pred hcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCC-eEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG-QRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~-~~~lv~ 487 (577)
.++|...+.||+|+||.||+|.+. ++.||||+++... ..+.|.+|+++|++++||||+++++++...+ ..++||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 456778899999999999999886 7899999997542 3567999999999999999999999987765 799999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~ 566 (577)
||+++|+|.++++.. ....+++..++.++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 267 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp ECCTTCBHHHHHHHH--CTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EecCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 999999999999743 234579999999999999999999999 99999999999999999999999999998654
No 106
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.93 E-value=5.5e-26 Score=224.56 Aligned_cols=150 Identities=19% Similarity=0.383 Sum_probs=134.3
Q ss_pred cCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeC--CeEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQRLLVY 487 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~lv~ 487 (577)
++|...+.||+|+||.||+|.+. ++.||||+++.........+.|.+|+.++++++||||+++++++... +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 56888899999999999999985 88999999987655566677899999999999999999999999877 7889999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeeCCCCCeEEeccccCccc
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS--VVHRNFKSANILLDDELNPHLSDCGLAALT 565 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~--ivHrDlk~~NILl~~~~~~kl~DFGla~~~ 565 (577)
||+++|+|.++++. .....+++.++..|+.|++.||+|||+. + |+||||||+||+++.++.+||+|||++...
T Consensus 89 e~~~~~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 89 HWMPYGSLYNVLHE--GTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp ECCTTCBHHHHHHS--CSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred cccCCCcHHHHHhh--cccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeee
Confidence 99999999999973 2334689999999999999999999998 6 999999999999999999999999987654
No 107
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.93 E-value=3.6e-26 Score=235.20 Aligned_cols=158 Identities=25% Similarity=0.381 Sum_probs=122.5
Q ss_pred hhcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEE
Q 008121 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 408 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 486 (577)
..++|...+.||+|+||.||+|... +++.||||+++.. ...+.+.+|++++++++||||+++++++...+..++|
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 126 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT----VDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLV 126 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc----hhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEE
Confidence 3467888999999999999999886 4789999998643 2345688999999999999999999999999999999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC---CCCeEEeccccCc
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---ELNPHLSDCGLAA 563 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~---~~~~kl~DFGla~ 563 (577)
|||+++|+|.+++. ....+++.++..++.|+++||+|||+. +|+||||||+|||++. ++.+||+|||+++
T Consensus 127 ~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~ 199 (349)
T 2w4o_A 127 LELVTGGELFDRIV----EKGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSK 199 (349)
T ss_dssp ECCCCSCBHHHHHT----TCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred EEeCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence 99999999999996 345689999999999999999999999 9999999999999975 8899999999999
Q ss_pred ccCCCcc-ccccCC
Q 008121 564 LTPNTER-QVITGT 576 (577)
Q Consensus 564 ~~~~~~~-~~~~Gt 576 (577)
....... ...+||
T Consensus 200 ~~~~~~~~~~~~gt 213 (349)
T 2w4o_A 200 IVEHQVLMKTVCGT 213 (349)
T ss_dssp -------------C
T ss_pred ccCcccccccccCC
Confidence 7654332 334454
No 108
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.93 E-value=1.2e-26 Score=247.17 Aligned_cols=151 Identities=28% Similarity=0.494 Sum_probs=131.0
Q ss_pred hcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 488 (577)
.++|...+.||+|+||.||+|.+.++..||||+++.... ..++|.+|+++|++++||||+++++++.. +..++|||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 456778889999999999999998888999999975432 34679999999999999999999999876 67899999
Q ss_pred ecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCCC
Q 008121 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (577)
Q Consensus 489 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~~ 568 (577)
|+++|+|.++++.. ....+++.++..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 259 ~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 333 (452)
T 1fmk_A 259 YMSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 333 (452)
T ss_dssp CCTTCBHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred hhcCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCC
Confidence 99999999999632 234689999999999999999999999 9999999999999999999999999999976543
No 109
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.93 E-value=3.3e-26 Score=226.48 Aligned_cols=162 Identities=31% Similarity=0.477 Sum_probs=124.8
Q ss_pred hcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccc--hHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALS--LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 486 (577)
.++|...+.||+|+||.||+|.+. ++.||||+++..... ....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 356788899999999999999875 889999998654221 12346789999999999999999999999999999999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC--------CCCeEEec
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD--------ELNPHLSD 558 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~--------~~~~kl~D 558 (577)
|||+++|+|.++++ ...+++..+..++.|++.||+|||+....+|+||||||+|||++. ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 99999999999984 457899999999999999999999993223999999999999986 67899999
Q ss_pred cccCcccCCCccccccCC
Q 008121 559 CGLAALTPNTERQVITGT 576 (577)
Q Consensus 559 FGla~~~~~~~~~~~~Gt 576 (577)
||+++...........||
T Consensus 160 fg~~~~~~~~~~~~~~~~ 177 (271)
T 3dtc_A 160 FGLAREWHRTTKMSAAGA 177 (271)
T ss_dssp CCC-------------CC
T ss_pred CCcccccccccccCCCCc
Confidence 999997765555455555
No 110
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.93 E-value=4.7e-26 Score=230.22 Aligned_cols=158 Identities=28% Similarity=0.430 Sum_probs=137.0
Q ss_pred hcCCCccceeccCccceEEEEEE------cCCcEEEEEEccccccchHHHHHHHHHHHHhhcC-CCCceeeEeeEEEeCC
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF------ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHG 481 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~ 481 (577)
.++|...+.||+|+||.||+|.+ .+++.||||+++... .....+.+.+|+.+++++ +||||+++++++...+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch-hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 45788889999999999999975 346789999997543 334567899999999999 9999999999999999
Q ss_pred eEEEEEEecCCCCHHHhhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCee
Q 008121 482 QRLLVYEYVGNGNLHDMLHFADD--------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANIL 547 (577)
Q Consensus 482 ~~~lv~e~~~~g~L~~~l~~~~~--------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIL 547 (577)
..++||||+++|+|.+++..... ....+++.++..++.|+++||+|||+. +|+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEE
Confidence 99999999999999999975321 123589999999999999999999999 9999999999999
Q ss_pred eCCCCCeEEeccccCcccCCCcc
Q 008121 548 LDDELNPHLSDCGLAALTPNTER 570 (577)
Q Consensus 548 l~~~~~~kl~DFGla~~~~~~~~ 570 (577)
++.++.+||+|||+++.......
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~ 200 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSN 200 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTT
T ss_pred EcCCCCEEEcccccccccccccc
Confidence 99999999999999997765443
No 111
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.93 E-value=8.5e-26 Score=224.18 Aligned_cols=151 Identities=27% Similarity=0.454 Sum_probs=119.8
Q ss_pred cCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccc-hHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
++|...+.||+|+||.||+|.. .+++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5788899999999999999976 46899999998754322 233567889999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||+ +++|.+.+. ....+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 93 e~~-~~~l~~~~~----~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 93 EYA-GNELFDYIV----QRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHH----TSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred hhc-CCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 999 778888886 345699999999999999999999999 999999999999999999999999999987654
Q ss_pred C
Q 008121 568 T 568 (577)
Q Consensus 568 ~ 568 (577)
.
T Consensus 165 ~ 165 (275)
T 2eue_A 165 G 165 (275)
T ss_dssp -
T ss_pred c
Confidence 3
No 112
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.93 E-value=6.9e-26 Score=225.00 Aligned_cols=159 Identities=28% Similarity=0.365 Sum_probs=137.6
Q ss_pred hcCCCccceeccCccceEEEEEEcC-CcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
.++|...+.||+|+||.||+|.... +..||+|++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF--VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM 85 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG--CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc--cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEE
Confidence 4568888999999999999998754 7789999986543 234567899999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---CCCCCeEEeccccCcc
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL---DDELNPHLSDCGLAAL 564 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl---~~~~~~kl~DFGla~~ 564 (577)
||+++++|.+++.. ...+++.++..|+.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.
T Consensus 86 e~~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~ 158 (277)
T 3f3z_A 86 ELCTGGELFERVVH----KRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 158 (277)
T ss_dssp ECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred eccCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEeccccee
Confidence 99999999999863 35689999999999999999999999 99999999999999 7889999999999987
Q ss_pred cCCCcc-ccccCC
Q 008121 565 TPNTER-QVITGT 576 (577)
Q Consensus 565 ~~~~~~-~~~~Gt 576 (577)
...... ....||
T Consensus 159 ~~~~~~~~~~~~t 171 (277)
T 3f3z_A 159 FKPGKMMRTKVGT 171 (277)
T ss_dssp CCTTSCBCCCCSC
T ss_pred ccCccchhccCCC
Confidence 654433 334455
No 113
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.93 E-value=4.7e-26 Score=234.19 Aligned_cols=151 Identities=32% Similarity=0.463 Sum_probs=132.9
Q ss_pred cCCCccceeccCccceEEEEEE-cCCcEEEEEEcccccc-chHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
+.|...+.||+|+||.||+|.. .+++.||||++..... .....+++.+|++++++++||||+++++++...+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4578889999999999999986 5689999999864322 2334567899999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||++ |+|.+++.. ....+++.++..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 134 e~~~-g~l~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 134 EYCL-GSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp ECCS-EEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred ecCC-CCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 9997 688888853 245789999999999999999999999 999999999999999999999999999987653
No 114
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.93 E-value=5.5e-26 Score=226.62 Aligned_cols=160 Identities=28% Similarity=0.420 Sum_probs=138.7
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccc-hHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
++|...+.||+|+||.||+|... +++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 56888899999999999999875 5788999998643221 122467899999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||+++|+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 94 EFAPRGELYKELQK----HGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp CCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 99999999999973 34689999999999999999999999 999999999999999999999999999987766
Q ss_pred CccccccCC
Q 008121 568 TERQVITGT 576 (577)
Q Consensus 568 ~~~~~~~Gt 576 (577)
.......||
T Consensus 167 ~~~~~~~~~ 175 (284)
T 2vgo_A 167 LRRRTMCGT 175 (284)
T ss_dssp SCBCCCCSC
T ss_pred cccccccCC
Confidence 555555555
No 115
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.93 E-value=3.2e-26 Score=227.59 Aligned_cols=157 Identities=29% Similarity=0.452 Sum_probs=136.1
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEe--CCeEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE--HGQRLL 485 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~~~l 485 (577)
.++|...+.||+|+||.||++... +++.||+|++..........+.+.+|++++++++||||+++++++.. .+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 356888899999999999999875 68999999997655455667789999999999999999999998854 568999
Q ss_pred EEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-----eeecCCCCCCeeeCCCCCeEEeccc
Q 008121 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS-----VVHRNFKSANILLDDELNPHLSDCG 560 (577)
Q Consensus 486 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~-----ivHrDlk~~NILl~~~~~~kl~DFG 560 (577)
||||+++|+|.+++.........+++..+..|+.|++.||+|||+. + |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 9999999999999976544556799999999999999999999998 6 9999999999999999999999999
Q ss_pred cCcccCCC
Q 008121 561 LAALTPNT 568 (577)
Q Consensus 561 la~~~~~~ 568 (577)
+++.....
T Consensus 162 ~~~~~~~~ 169 (279)
T 2w5a_A 162 LARILNHD 169 (279)
T ss_dssp HHHHC---
T ss_pred hheeeccc
Confidence 99876543
No 116
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.93 E-value=6.7e-26 Score=231.29 Aligned_cols=149 Identities=18% Similarity=0.245 Sum_probs=131.3
Q ss_pred cCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcC-CCCceeeEeeEEEeCCeEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 487 (577)
++|...+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 84 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS----RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL 84 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC----SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc----chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence 5688899999999999999986 568999999986432 223578899999999 9999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC-----eEEeccccC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN-----PHLSDCGLA 562 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~-----~kl~DFGla 562 (577)
||+ +|+|.+++... ...+++.++..|+.|++.||+|||+. +|+||||||+|||++.++. +||+|||++
T Consensus 85 e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a 157 (330)
T 2izr_A 85 ELL-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157 (330)
T ss_dssp ECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTC
T ss_pred EeC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccc
Confidence 999 99999999742 45799999999999999999999999 9999999999999998887 999999999
Q ss_pred cccCCCc
Q 008121 563 ALTPNTE 569 (577)
Q Consensus 563 ~~~~~~~ 569 (577)
+......
T Consensus 158 ~~~~~~~ 164 (330)
T 2izr_A 158 KEYIDPE 164 (330)
T ss_dssp EESBCTT
T ss_pred eeeecCC
Confidence 9765443
No 117
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.93 E-value=4.9e-26 Score=245.31 Aligned_cols=162 Identities=25% Similarity=0.383 Sum_probs=134.4
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
.++|...+.||+|+||.||+|... +++.||+|++............+.+|+.+++.++|||||+++++|...+..|+||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 346888999999999999999875 6889999999765443444667899999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC---CCCeEEeccccCcc
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---ELNPHLSDCGLAAL 564 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~---~~~~kl~DFGla~~ 564 (577)
||+++|+|.+.+.. ...+++..+..|+.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.
T Consensus 116 e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 116 ECYKGGELFDEIIH----RMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred ecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 99999999998863 35689999999999999999999999 9999999999999976 45699999999998
Q ss_pred cCCCcc-ccccCCC
Q 008121 565 TPNTER-QVITGTS 577 (577)
Q Consensus 565 ~~~~~~-~~~~Gt~ 577 (577)
...... ...+||+
T Consensus 189 ~~~~~~~~~~~gt~ 202 (494)
T 3lij_A 189 FENQKKMKERLGTA 202 (494)
T ss_dssp CBTTBCBCCCCSCT
T ss_pred CCCCccccccCCCc
Confidence 765433 3455664
No 118
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.93 E-value=8.2e-26 Score=230.70 Aligned_cols=151 Identities=25% Similarity=0.408 Sum_probs=132.7
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 488 (577)
++|...+.||+|+||.||+|... +++.||||++..........+.+.+|++++++++||||+++++++...+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 56888899999999999999875 48999999986655445556778899999999999999999999999999999999
Q ss_pred ecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 489 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
|+++++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 105 ~~~~~~l~~~~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 105 FVDHTILDDLEL----FPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp CCSEEHHHHHHH----STTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred cCCcchHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 999999988765 345699999999999999999999999 999999999999999999999999999986543
No 119
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.93 E-value=1.3e-25 Score=225.14 Aligned_cols=151 Identities=21% Similarity=0.350 Sum_probs=134.7
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEcccccc-chHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 486 (577)
.++|...+.||+|+||.||++... +++.||+|++..... .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 356778899999999999999875 478899999865432 234567789999999999999999999999999999999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccC
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~ 566 (577)
|||+++++|.+++.. ...+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 94 ~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 94 LELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp EECCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 999999999998863 35689999999999999999999999 99999999999999999999999999998764
No 120
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.93 E-value=4.4e-26 Score=224.98 Aligned_cols=149 Identities=28% Similarity=0.468 Sum_probs=134.9
Q ss_pred cCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEEe
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 489 (577)
++|...+.||+|+||.||+|.+.+++.||+|++..... ..+++.+|++++++++||||+++++++...+..++||||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 56778899999999999999998899999999975432 245789999999999999999999999999999999999
Q ss_pred cCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 490 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
+++|+|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~~~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 156 (267)
T 3t9t_A 85 MEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 156 (267)
T ss_dssp CTTCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred CCCCcHHHHHhh---CcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccc
Confidence 999999999963 235689999999999999999999999 999999999999999999999999999987644
No 121
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.93 E-value=5.8e-26 Score=237.17 Aligned_cols=150 Identities=23% Similarity=0.290 Sum_probs=132.2
Q ss_pred cCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCC--CCceeeEeeEEEeCCeEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR--HPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~~~~~lv~ 487 (577)
.+|...+.||+|+||.||+|...+++.||||++..........+.+.+|++++.+++ ||||+++++++...+..|+||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 458889999999999999999888999999999765545566788999999999997 599999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
| +.+|+|.+++.. ...+++.++..|+.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++....
T Consensus 136 E-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 136 E-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp E-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred e-cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 9 568899999973 34789999999999999999999999 999999999999996 57999999999997754
Q ss_pred C
Q 008121 568 T 568 (577)
Q Consensus 568 ~ 568 (577)
.
T Consensus 207 ~ 207 (390)
T 2zmd_A 207 D 207 (390)
T ss_dssp -
T ss_pred C
Confidence 4
No 122
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.93 E-value=3.6e-26 Score=236.16 Aligned_cols=161 Identities=22% Similarity=0.353 Sum_probs=137.4
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
.++|...+.||+|+||.||+|... +++.||+|++.... .....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 110 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 110 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc-CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence 356888899999999999999875 68999999986542 3455678999999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||+++|+|.++++. ...+++..+..|+.|++.||+|||+.. +|+||||||+|||++.++.+||+|||+++....
T Consensus 111 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 111 EHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp CCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred ECCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 99999999999973 346899999999999999999999842 799999999999999999999999999986544
Q ss_pred CccccccCC
Q 008121 568 TERQVITGT 576 (577)
Q Consensus 568 ~~~~~~~Gt 576 (577)
.......||
T Consensus 185 ~~~~~~~gt 193 (360)
T 3eqc_A 185 SMANSFVGT 193 (360)
T ss_dssp HC----CCC
T ss_pred ccccCCCCC
Confidence 444444454
No 123
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.93 E-value=1.1e-25 Score=230.14 Aligned_cols=151 Identities=21% Similarity=0.350 Sum_probs=135.1
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEcccccc-chHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 486 (577)
.++|...+.||+|+||.||++... +++.||+|++..... .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 456888899999999999999875 478999999865432 234567789999999999999999999999999999999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccC
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~ 566 (577)
|||+++++|.+++.. ...+++.++..|+.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 120 ~e~~~~~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 120 LELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp ECCCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 999999999999863 35689999999999999999999999 99999999999999999999999999998764
No 124
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.93 E-value=6.8e-26 Score=237.26 Aligned_cols=164 Identities=25% Similarity=0.380 Sum_probs=137.7
Q ss_pred hcCCCccceeccCccceEEEEEEcC-CcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCC--eEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG--QRLL 485 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~l 485 (577)
.++|...+.||+|+||.||+|.+.. ++.||||+++.... ....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l 86 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence 3568888999999999999998754 89999999975432 233567889999999999999999999998765 7899
Q ss_pred EEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----CCCCCeEEecccc
Q 008121 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL----DDELNPHLSDCGL 561 (577)
Q Consensus 486 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl----~~~~~~kl~DFGl 561 (577)
||||+++|+|.++++... ....+++..+..|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+
T Consensus 87 v~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 87 IMEFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp EECCCTTEEHHHHTTSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred EEecCCCCCHHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 999999999999996432 223489999999999999999999999 99999999999999 7788899999999
Q ss_pred CcccCCCcc-ccccCCC
Q 008121 562 AALTPNTER-QVITGTS 577 (577)
Q Consensus 562 a~~~~~~~~-~~~~Gt~ 577 (577)
++....... ....||+
T Consensus 163 a~~~~~~~~~~~~~gt~ 179 (396)
T 4eut_A 163 ARELEDDEQFVSLYGTE 179 (396)
T ss_dssp CEECCCGGGSSCSSSCC
T ss_pred ceEccCCCccccccCCc
Confidence 997755443 2344553
No 125
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.93 E-value=9.4e-26 Score=224.15 Aligned_cols=152 Identities=29% Similarity=0.428 Sum_probs=134.2
Q ss_pred cCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccc-hHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
++|...+.||+|+||.||+|.. .+++.||||++...... ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 5688889999999999999987 56899999998643211 122467899999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||+++|+|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 91 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 91 EMCHNGEMNRYLKN---RVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp ECCTTEEHHHHHHT---CSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred ecCCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 99999999999962 346789999999999999999999999 999999999999999999999999999987653
No 126
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=4.5e-26 Score=233.75 Aligned_cols=157 Identities=27% Similarity=0.424 Sum_probs=132.2
Q ss_pred hhcCCCccceeccCccceEEEEEE------cCCcEEEEEEccccccchHHHHHHHHHHHHhhcC-CCCceeeEeeEEEeC
Q 008121 408 ATNSFSQEFLIGEGSLGRVYRAEF------ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEH 480 (577)
Q Consensus 408 ~~~~~~~~~~lg~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~ 480 (577)
..++|...+.||+|+||.||+|.+ .+++.||||+++... .....+.+.+|+.++.++ +||||+++++++...
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 346788899999999999999986 245689999997542 233456799999999999 899999999999999
Q ss_pred CeEEEEEEecCCCCHHHhhhhccCC-------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCC
Q 008121 481 GQRLLVYEYVGNGNLHDMLHFADDS-------------------SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNF 541 (577)
Q Consensus 481 ~~~~lv~e~~~~g~L~~~l~~~~~~-------------------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDl 541 (577)
+..++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +|+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence 9999999999999999999743211 13489999999999999999999999 9999999
Q ss_pred CCCCeeeCCCCCeEEeccccCcccCCC
Q 008121 542 KSANILLDDELNPHLSDCGLAALTPNT 568 (577)
Q Consensus 542 k~~NILl~~~~~~kl~DFGla~~~~~~ 568 (577)
||+|||++.++.+||+|||+++.....
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~ 225 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSD 225 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGC
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccC
Confidence 999999999999999999999876443
No 127
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=1.8e-26 Score=238.11 Aligned_cols=152 Identities=24% Similarity=0.336 Sum_probs=133.1
Q ss_pred hcCCCccceeccCccceEEEEEE----cCCcEEEEEEcccccc--chHHHHHHHHHHHHhhcC-CCCceeeEeeEEEeCC
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF----ANGKIMAVKKIDNAAL--SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHG 481 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~ 481 (577)
.++|...+.||+|+||.||+++. .+++.||||+++.... .....+.+.+|++++.++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 35788899999999999999987 3689999999875422 112344577899999999 6999999999999999
Q ss_pred eEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEecccc
Q 008121 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (577)
Q Consensus 482 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGl 561 (577)
..++||||+++|+|.+++.. ...+++.++..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~ 205 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQ----RERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGL 205 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred eEEEEeecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCC
Confidence 99999999999999999973 34689999999999999999999999 999999999999999999999999999
Q ss_pred CcccCC
Q 008121 562 AALTPN 567 (577)
Q Consensus 562 a~~~~~ 567 (577)
++....
T Consensus 206 a~~~~~ 211 (355)
T 1vzo_A 206 SKEFVA 211 (355)
T ss_dssp EEECCG
T ss_pred Ceeccc
Confidence 987643
No 128
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.93 E-value=5.8e-26 Score=226.81 Aligned_cols=154 Identities=25% Similarity=0.461 Sum_probs=137.4
Q ss_pred hhcCCCccceeccCccceEEEEEEcC-CcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEE
Q 008121 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 408 ~~~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 486 (577)
..++|...+.||+|+||.||+|.+.. ++.||+|++... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v 87 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC---STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence 34668888999999999999998764 889999998653 33567799999999999999999999999999999999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccC
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~ 566 (577)
|||+++|+|.++++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 88 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 88 TEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp EECCTTEEHHHHHHHC--CTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred EEcCCCCcHHHHHHhc--ccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 9999999999999742 346689999999999999999999999 99999999999999999999999999999765
Q ss_pred CCc
Q 008121 567 NTE 569 (577)
Q Consensus 567 ~~~ 569 (577)
...
T Consensus 163 ~~~ 165 (288)
T 3kfa_A 163 GDT 165 (288)
T ss_dssp SSS
T ss_pred CCc
Confidence 443
No 129
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.93 E-value=6.1e-26 Score=252.73 Aligned_cols=163 Identities=20% Similarity=0.296 Sum_probs=139.0
Q ss_pred hhcCCCccceeccCccceEEEEEEc-CCcEEEEEEcccccc-chHHHHHHHHHHHHhhcC-CCCceeeEeeEEEeCCeEE
Q 008121 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRL 484 (577)
Q Consensus 408 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~ 484 (577)
..++|...+.||+|+||.||+|+.. +++.||||+++.... .....+.+..|.+++..+ +||||+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3467889999999999999999875 578999999875321 123345678899999887 7999999999999999999
Q ss_pred EEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcc
Q 008121 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (577)
Q Consensus 485 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~ 564 (577)
+||||+++|+|.++++. ...+++..+..|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+.
T Consensus 419 lV~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp EEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred EEEeCcCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeec
Confidence 99999999999999973 34689999999999999999999999 999999999999999999999999999996
Q ss_pred cC--CCccccccCCC
Q 008121 565 TP--NTERQVITGTS 577 (577)
Q Consensus 565 ~~--~~~~~~~~Gt~ 577 (577)
.. .......+||+
T Consensus 492 ~~~~~~~~~~~~GT~ 506 (674)
T 3pfq_A 492 NIWDGVTTKTFCGTP 506 (674)
T ss_dssp CCCTTCCBCCCCSCS
T ss_pred cccCCcccccccCCC
Confidence 43 33345567875
No 130
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.93 E-value=1.5e-25 Score=229.07 Aligned_cols=156 Identities=26% Similarity=0.473 Sum_probs=134.5
Q ss_pred hcCCCccceeccCccceEEEEEEc--------CCcEEEEEEccccccchHHHHHHHHHHHHhhcC-CCCceeeEeeEEEe
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA--------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAE 479 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~ 479 (577)
.++|...+.||+|+||.||+|.+. +++.||||+++... .....+++.+|+++++++ +||||+++++++..
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC-cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 467888899999999999999863 46789999997543 345567799999999999 89999999999999
Q ss_pred CCeEEEEEEecCCCCHHHhhhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCee
Q 008121 480 HGQRLLVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANIL 547 (577)
Q Consensus 480 ~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIL 547 (577)
.+..++||||+++|+|.+++..... ....+++.+++.++.|+++||+|||+. +|+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEE
Confidence 9999999999999999999974321 123589999999999999999999999 9999999999999
Q ss_pred eCCCCCeEEeccccCcccCCC
Q 008121 548 LDDELNPHLSDCGLAALTPNT 568 (577)
Q Consensus 548 l~~~~~~kl~DFGla~~~~~~ 568 (577)
++.++.+||+|||+++.....
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~ 210 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNI 210 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTT
T ss_pred EcCCCCEEEcccccccccccc
Confidence 999999999999999876543
No 131
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.93 E-value=4.6e-26 Score=245.11 Aligned_cols=161 Identities=25% Similarity=0.410 Sum_probs=137.4
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
.++|...+.||+|+||.||+|... +++.||||++............+.+|++++++++||||+++++++...+..|+||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 356888899999999999999875 6899999998654433345677899999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC---CCCCeEEeccccCcc
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD---DELNPHLSDCGLAAL 564 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~---~~~~~kl~DFGla~~ 564 (577)
||+++|+|.+.+.. ...+++..+..|+.|++.||.|||+. +|+||||||+|||++ .++.+||+|||+++.
T Consensus 101 e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 101 ELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp CCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 99999999998863 35689999999999999999999999 999999999999995 566899999999987
Q ss_pred cCCCcc-ccccCC
Q 008121 565 TPNTER-QVITGT 576 (577)
Q Consensus 565 ~~~~~~-~~~~Gt 576 (577)
...... ....||
T Consensus 174 ~~~~~~~~~~~gt 186 (486)
T 3mwu_A 174 FQQNTKMKDRIGT 186 (486)
T ss_dssp BCCC----CCTTG
T ss_pred CCCCCccCCCcCC
Confidence 654332 344455
No 132
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.93 E-value=1.2e-25 Score=234.83 Aligned_cols=150 Identities=25% Similarity=0.404 Sum_probs=124.8
Q ss_pred hhcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCC-CCceeeEeeEEEeCC--eE
Q 008121 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHG--QR 483 (577)
Q Consensus 408 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~--~~ 483 (577)
..++|...+.||+|+||.||+|.. .+++.||||++...........++.+|+.++.++. ||||+++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 356788999999999999999976 46899999999765444556777889999999997 999999999997554 78
Q ss_pred EEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCc
Q 008121 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (577)
Q Consensus 484 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~ 563 (577)
|+||||++ |+|.++++. ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+|+
T Consensus 87 ~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRA-----NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSR 157 (388)
T ss_dssp EEEEECCS-EEHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEecccC-cCHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence 99999997 699999862 4689999999999999999999999 99999999999999999999999999998
Q ss_pred ccC
Q 008121 564 LTP 566 (577)
Q Consensus 564 ~~~ 566 (577)
...
T Consensus 158 ~~~ 160 (388)
T 3oz6_A 158 SFV 160 (388)
T ss_dssp ESS
T ss_pred ccc
Confidence 764
No 133
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.93 E-value=1.7e-26 Score=251.03 Aligned_cols=151 Identities=28% Similarity=0.494 Sum_probs=133.8
Q ss_pred hcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 488 (577)
.++|...+.||+|+||.||+|.+.++..||||+++.... ..++|.+|+++|++++||||+++++++.+ +..++|||
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 456778889999999999999998888999999975432 34679999999999999999999999876 67899999
Q ss_pred ecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCCC
Q 008121 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (577)
Q Consensus 489 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~~ 568 (577)
|+++|+|.++++.. ....+++.+++.|+.||++||+|||++ +||||||||+|||+++++.+||+|||+++.....
T Consensus 342 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 416 (535)
T 2h8h_A 342 YMSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 416 (535)
T ss_dssp CCTTEEHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH
T ss_pred hhcCCcHHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCC
Confidence 99999999999632 234589999999999999999999999 9999999999999999999999999999976543
No 134
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.93 E-value=6.7e-26 Score=226.49 Aligned_cols=158 Identities=23% Similarity=0.356 Sum_probs=126.0
Q ss_pred hcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
.++|...+.||+|+||.||+|.. .+++.||||+++.........+.+.++...++.++||||+++++++...+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 46788899999999999999987 56899999999765433344445556666688899999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||++ |+|.++++........+++..+..|+.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 9997 5998888654445678999999999999999999999853 799999999999999999999999999987654
Q ss_pred Cc
Q 008121 568 TE 569 (577)
Q Consensus 568 ~~ 569 (577)
..
T Consensus 163 ~~ 164 (290)
T 3fme_A 163 DV 164 (290)
T ss_dssp --
T ss_pred cc
Confidence 43
No 135
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.93 E-value=1e-25 Score=237.55 Aligned_cols=163 Identities=22% Similarity=0.340 Sum_probs=129.5
Q ss_pred HhhcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccc------hHHHHHHHHHHHHhhcCCCCceeeEeeEEEe
Q 008121 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS------LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE 479 (577)
Q Consensus 407 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~ 479 (577)
...++|...+.||+|+||.||+|... +++.||||++...... ......+.+|++++++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 34578999999999999999999764 5799999998654321 112235789999999999999999999975
Q ss_pred CCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC---CCeEE
Q 008121 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE---LNPHL 556 (577)
Q Consensus 480 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~---~~~kl 556 (577)
.+..++||||+++|+|.+++. ....+++.++..|+.|++.||+|||+. +|+||||||+|||++.+ +.+||
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl 283 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKI 283 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTS----SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred cCceEEEEEcCCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEE
Confidence 456899999999999999885 456799999999999999999999999 99999999999999754 45999
Q ss_pred eccccCcccCCCcc-ccccCCC
Q 008121 557 SDCGLAALTPNTER-QVITGTS 577 (577)
Q Consensus 557 ~DFGla~~~~~~~~-~~~~Gt~ 577 (577)
+|||+|+....... ...+||+
T Consensus 284 ~DFG~a~~~~~~~~~~~~~gt~ 305 (419)
T 3i6u_A 284 TDFGHSKILGETSLMRTLCGTP 305 (419)
T ss_dssp CCSSTTTSCC-----------C
T ss_pred eecccceecCCCccccccCCCC
Confidence 99999998654432 3445553
No 136
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.93 E-value=1.3e-25 Score=228.68 Aligned_cols=142 Identities=27% Similarity=0.416 Sum_probs=125.3
Q ss_pred cceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCC-CCceeeEeeEEEeCCeEEEEEEecCC
Q 008121 415 EFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLLVYEYVGN 492 (577)
Q Consensus 415 ~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~~ 492 (577)
.+.||+|+||.||+|... +++.||||++... ....+.+|+.++..+. ||||+++++++.+.+..|+||||+++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence 478999999999999875 5899999998532 3456788999999997 99999999999999999999999999
Q ss_pred CCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC---CeEEeccccCcccCCC
Q 008121 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL---NPHLSDCGLAALTPNT 568 (577)
Q Consensus 493 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~---~~kl~DFGla~~~~~~ 568 (577)
|+|.++++. ...+++.++..|+.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++.....
T Consensus 91 ~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 91 GELFERIKK----KKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp CBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 999999973 45799999999999999999999999 999999999999997665 8999999999876543
No 137
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.93 E-value=1.7e-25 Score=226.08 Aligned_cols=155 Identities=24% Similarity=0.384 Sum_probs=130.3
Q ss_pred cCCCccceeccCccceEEEEEE-cCCcEEEEEEccccc-cchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAA-LSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
++|...+.||+|+||.||+|.. .+++.||||+++... .......++.+|+.++++++||||+++++++...+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 4688889999999999999976 568999999987532 23445677999999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||+++|+|.+++.........+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 99999999999975444566789999999999999999999999 999999999999999999999999999987644
No 138
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.93 E-value=3.5e-26 Score=234.60 Aligned_cols=160 Identities=26% Similarity=0.295 Sum_probs=134.5
Q ss_pred HHHHhhcCCCccceeccCccceEEEEEE-cCCcEEEEEEcccccc---chHHHHHHHHHHHHhhcCCCCceeeEeeEEEe
Q 008121 404 SLQTATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAAL---SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE 479 (577)
Q Consensus 404 ~~~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~ 479 (577)
++....++|...+.||+|+||.||+|.. .+++.||+|++..... .....+.+.+|++++++++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 3456678899999999999999999977 4588999999864321 23456789999999999999999999999999
Q ss_pred CCeEEEEEEecCCCCHHHhhhhccC------------------------------------CCCCCCHHHHHHHHHHHHH
Q 008121 480 HGQRLLVYEYVGNGNLHDMLHFADD------------------------------------SSKNLTWNARVRVALGTAR 523 (577)
Q Consensus 480 ~~~~~lv~e~~~~g~L~~~l~~~~~------------------------------------~~~~l~~~~~~~i~~~i~~ 523 (577)
.+..++||||+++|+|.+++..... ....+++..+..|+.|++.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 9999999999999999999852110 0223467778899999999
Q ss_pred HHHHHhcCCCCCeeecCCCCCCeeeCCCC--CeEEeccccCcccC
Q 008121 524 ALEYLHEVCLPSVVHRNFKSANILLDDEL--NPHLSDCGLAALTP 566 (577)
Q Consensus 524 ~L~yLH~~~~~~ivHrDlk~~NILl~~~~--~~kl~DFGla~~~~ 566 (577)
||+|||+. +|+||||||+|||++.++ .+||+|||+++...
T Consensus 180 ~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~ 221 (345)
T 3hko_A 180 ALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFY 221 (345)
T ss_dssp HHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGG
T ss_pred HHHHHHHC---CccccCCChhhEEEecCCCceEEEeecccccccc
Confidence 99999999 999999999999998776 89999999998653
No 139
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.93 E-value=1.1e-25 Score=228.72 Aligned_cols=161 Identities=24% Similarity=0.311 Sum_probs=138.0
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccch----HHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL----QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 483 (577)
.++|...+.||+|+||.||+|... +++.||+|.++...... ...+++.+|+.++++++||||+++++++...+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 356888899999999999999875 58999999986543221 1356789999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC----CeEEecc
Q 008121 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL----NPHLSDC 559 (577)
Q Consensus 484 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~----~~kl~DF 559 (577)
++||||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+||
T Consensus 91 ~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 91 VLILELVSGGELFDFLA----QKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEECCCCSCBHHHHHH----TCSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 99999999999999996 345789999999999999999999999 999999999999999887 7999999
Q ss_pred ccCcccCCCcc-ccccCC
Q 008121 560 GLAALTPNTER-QVITGT 576 (577)
Q Consensus 560 Gla~~~~~~~~-~~~~Gt 576 (577)
|+++....... ....||
T Consensus 164 g~~~~~~~~~~~~~~~gt 181 (321)
T 2a2a_A 164 GLAHEIEDGVEFKNIFGT 181 (321)
T ss_dssp TTCEECCTTCCCCCCCSC
T ss_pred ccceecCccccccccCCC
Confidence 99987654432 233454
No 140
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.93 E-value=4.5e-26 Score=234.08 Aligned_cols=162 Identities=20% Similarity=0.352 Sum_probs=139.3
Q ss_pred hcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchH---------------HHHHHHHHHHHhhcCCCCceeeE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQ---------------EEDNFLEAVSNMSRLRHPNIVTL 473 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~---------------~~~~~~~e~~~l~~l~H~niv~l 473 (577)
.++|...+.||+|+||.||+|.. +++.||||++........ ..+.|.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 45788899999999999999988 899999999864322111 11779999999999999999999
Q ss_pred eeEEEeCCeEEEEEEecCCCCHHHh------hhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCe
Q 008121 474 AGYCAEHGQRLLVYEYVGNGNLHDM------LHFADDSSKNLTWNARVRVALGTARALEYLHE-VCLPSVVHRNFKSANI 546 (577)
Q Consensus 474 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~-~~~~~ivHrDlk~~NI 546 (577)
++++...+..++||||+++|+|.++ +. ......+++..+..++.|++.||+|||+ . +|+||||||+||
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~--~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Ni 183 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLD--KNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNI 183 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSC--SSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhh--hccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhE
Confidence 9999999999999999999999998 53 2225679999999999999999999999 7 999999999999
Q ss_pred eeCCCCCeEEeccccCcccCCCccccccCC
Q 008121 547 LLDDELNPHLSDCGLAALTPNTERQVITGT 576 (577)
Q Consensus 547 Ll~~~~~~kl~DFGla~~~~~~~~~~~~Gt 576 (577)
+++.++.+||+|||+++...........||
T Consensus 184 l~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 213 (348)
T 2pml_X 184 LMDKNGRVKLSDFGESEYMVDKKIKGSRGT 213 (348)
T ss_dssp EECTTSCEEECCCTTCEECBTTEECSSCSC
T ss_pred EEcCCCcEEEeccccccccccccccCCCCC
Confidence 999999999999999998655544444444
No 141
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.93 E-value=1.3e-25 Score=222.58 Aligned_cols=150 Identities=27% Similarity=0.382 Sum_probs=134.7
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
.++|...+.||+|+||.||+|... +++.||||++.... .....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGG-CTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeecc-chhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 356888899999999999999875 68999999986443 2344677899999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~ 566 (577)
||+++|+|.+++. ....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 85 e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 156 (276)
T 2yex_A 85 EYCSGGELFDRIE----PDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (276)
T ss_dssp ECCTTEEGGGGSB----TTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EecCCCcHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccC
Confidence 9999999999985 345789999999999999999999999 99999999999999999999999999998653
No 142
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.93 E-value=2.3e-25 Score=222.45 Aligned_cols=151 Identities=29% Similarity=0.481 Sum_probs=129.1
Q ss_pred hcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHH-----HHHHHHHHHHhhcCCCCceeeEeeEEEeCCe
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQE-----EDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~-----~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 482 (577)
.++|...+.||+|+||.||+|.+ .+++.||+|++......... .+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 35678889999999999999987 46899999998644322111 167899999999999999999999987665
Q ss_pred EEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeeCCCCC-----eE
Q 008121 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS--VVHRNFKSANILLDDELN-----PH 555 (577)
Q Consensus 483 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~--ivHrDlk~~NILl~~~~~-----~k 555 (577)
++||||+++|+|.+.+. .....+++..+..++.|++.||+|||+. + |+||||||+|||++.++. +|
T Consensus 97 -~lv~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~k 169 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAK 169 (287)
T ss_dssp -EEEEECCTTCBHHHHHH---CTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEE
T ss_pred -eEEEEecCCCCHHHHHh---cccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEE
Confidence 69999999999999885 2445799999999999999999999998 7 999999999999988776 99
Q ss_pred EeccccCcccCC
Q 008121 556 LSDCGLAALTPN 567 (577)
Q Consensus 556 l~DFGla~~~~~ 567 (577)
|+|||+++....
T Consensus 170 l~Dfg~~~~~~~ 181 (287)
T 4f0f_A 170 VADFGLSQQSVH 181 (287)
T ss_dssp ECCCTTCBCCSS
T ss_pred eCCCCccccccc
Confidence 999999986543
No 143
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.93 E-value=6.1e-26 Score=225.62 Aligned_cols=152 Identities=28% Similarity=0.475 Sum_probs=133.3
Q ss_pred hcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 488 (577)
.++|...+.||+|+||.||+|...+++.||||+++... ...+.|.+|++++++++||||+++++++.. +..++|||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e 87 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITE 87 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc---ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEe
Confidence 45678889999999999999999888899999987543 235678999999999999999999999864 56899999
Q ss_pred ecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCCC
Q 008121 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (577)
Q Consensus 489 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~~ 568 (577)
|+++|+|.+++... ....+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 88 ~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T 1qpc_A 88 YMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (279)
T ss_dssp CCTTCBHHHHTTSH--HHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred cCCCCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence 99999999999622 123689999999999999999999999 9999999999999999999999999999977554
Q ss_pred c
Q 008121 569 E 569 (577)
Q Consensus 569 ~ 569 (577)
.
T Consensus 163 ~ 163 (279)
T 1qpc_A 163 E 163 (279)
T ss_dssp C
T ss_pred c
Confidence 3
No 144
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.93 E-value=1e-25 Score=240.43 Aligned_cols=159 Identities=21% Similarity=0.265 Sum_probs=130.0
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeC------C
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH------G 481 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------~ 481 (577)
.++|...+.||+|+||.||+|... +++.||||++..........+++.+|+.+++.++|||||++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467889999999999999999764 589999999976544555677899999999999999999999999654 3
Q ss_pred eEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEecccc
Q 008121 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (577)
Q Consensus 482 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGl 561 (577)
..|+||||+++ +|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~lv~E~~~~-~l~~~~~------~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp EEEEEEECCSE-EHHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEEeCCCC-CHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 57999999975 5777764 2489999999999999999999999 999999999999999999999999999
Q ss_pred CcccCCCcc-ccccCCC
Q 008121 562 AALTPNTER-QVITGTS 577 (577)
Q Consensus 562 a~~~~~~~~-~~~~Gt~ 577 (577)
|+....... ...+||+
T Consensus 211 a~~~~~~~~~~~~~gt~ 227 (464)
T 3ttj_A 211 ARTAGTSFMMTPYVVTR 227 (464)
T ss_dssp C-----CCCC----CCC
T ss_pred eeecCCCcccCCCcccc
Confidence 997655432 3345653
No 145
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.93 E-value=1.3e-25 Score=227.10 Aligned_cols=158 Identities=24% Similarity=0.468 Sum_probs=129.5
Q ss_pred HhhcCCCccceeccCccceEEEEEEc----CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCC-
Q 008121 407 TATNSFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG- 481 (577)
Q Consensus 407 ~~~~~~~~~~~lg~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~- 481 (577)
...++|...+.||+|+||.||+|.+. +++.||+|+++.........+.+.+|+.++++++||||+++++++...+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 34567888899999999999999764 3458999999765555566778999999999999999999999997755
Q ss_pred ----eEEEEEEecCCCCHHHhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeE
Q 008121 482 ----QRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPH 555 (577)
Q Consensus 482 ----~~~lv~e~~~~g~L~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~k 555 (577)
..++||||+++|+|.+++.... .....+++..++.|+.|+++||.|||+. +|+||||||+||+++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEE
Confidence 3599999999999999985332 3456799999999999999999999999 999999999999999999999
Q ss_pred EeccccCcccCC
Q 008121 556 LSDCGLAALTPN 567 (577)
Q Consensus 556 l~DFGla~~~~~ 567 (577)
|+|||+++....
T Consensus 188 l~Dfg~~~~~~~ 199 (313)
T 3brb_A 188 VADFGLSKKIYS 199 (313)
T ss_dssp ECSCSCC-----
T ss_pred EeecCcceeccc
Confidence 999999987643
No 146
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.93 E-value=7.3e-26 Score=229.92 Aligned_cols=158 Identities=22% Similarity=0.366 Sum_probs=137.3
Q ss_pred HHhhcCCCccceeccCccceEEEEEEc------CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEe
Q 008121 406 QTATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE 479 (577)
Q Consensus 406 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~ 479 (577)
....++|...+.||+|+||.||+|.+. +++.||||++.... ......+|.+|++++++++||||+++++++..
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 99 (322)
T 1p4o_A 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 99 (322)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS
T ss_pred cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEcc
Confidence 345677888999999999999999764 36789999997543 34456679999999999999999999999999
Q ss_pred CCeEEEEEEecCCCCHHHhhhhcc------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC
Q 008121 480 HGQRLLVYEYVGNGNLHDMLHFAD------DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN 553 (577)
Q Consensus 480 ~~~~~lv~e~~~~g~L~~~l~~~~------~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~ 553 (577)
.+..++||||+++|+|.++++... .....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 100 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~ 176 (322)
T 1p4o_A 100 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFT 176 (322)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCC
T ss_pred CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCe
Confidence 999999999999999999997422 1225678999999999999999999999 9999999999999999999
Q ss_pred eEEeccccCcccCC
Q 008121 554 PHLSDCGLAALTPN 567 (577)
Q Consensus 554 ~kl~DFGla~~~~~ 567 (577)
+||+|||+++....
T Consensus 177 ~kl~Dfg~~~~~~~ 190 (322)
T 1p4o_A 177 VKIGDFGMTRDIYE 190 (322)
T ss_dssp EEECCTTCCCGGGG
T ss_pred EEECcCcccccccc
Confidence 99999999986543
No 147
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.93 E-value=9.2e-26 Score=226.94 Aligned_cols=153 Identities=22% Similarity=0.430 Sum_probs=131.3
Q ss_pred cCCCccceeccCccceEEEEEE-----cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeC--Ce
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEF-----ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQ 482 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~ 482 (577)
+.|...+.||+|+||.||+|.+ .+++.||||+++... .....+.+.+|++++++++||||+++++++... ..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 4577789999999999999984 358899999997543 233456789999999999999999999999876 66
Q ss_pred EEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccC
Q 008121 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (577)
Q Consensus 483 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla 562 (577)
.++||||+++|+|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 100 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 173 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPK---NKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 173 (302)
T ss_dssp EEEEEECCTTCBHHHHHHH---HTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred EEEEEEeCCCCcHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccc
Confidence 8999999999999999953 235689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCc
Q 008121 563 ALTPNTE 569 (577)
Q Consensus 563 ~~~~~~~ 569 (577)
+......
T Consensus 174 ~~~~~~~ 180 (302)
T 4e5w_A 174 KAIETDK 180 (302)
T ss_dssp EECCTTC
T ss_pred ccccCCC
Confidence 9775543
No 148
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.93 E-value=1.4e-25 Score=242.36 Aligned_cols=162 Identities=23% Similarity=0.349 Sum_probs=135.8
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccch-----------HHHHHHHHHHHHhhcCCCCceeeEeeE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL-----------QEEDNFLEAVSNMSRLRHPNIVTLAGY 476 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~-----------~~~~~~~~e~~~l~~l~H~niv~l~~~ 476 (577)
.++|...+.||+|+||.||+|... +++.||||++....... ...+.+.+|+.++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467888999999999999999875 57899999986543221 235678999999999999999999999
Q ss_pred EEeCCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC---C
Q 008121 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL---N 553 (577)
Q Consensus 477 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~---~ 553 (577)
+.+.+..|+||||+++|+|.+++.. ...+++..+..|+.|++.||+|||+. +|+||||||+|||++.++ .
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIIN----RHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSS
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCcc
Confidence 9999999999999999999999863 35689999999999999999999999 999999999999998775 6
Q ss_pred eEEeccccCcccCCCcc-ccccCCC
Q 008121 554 PHLSDCGLAALTPNTER-QVITGTS 577 (577)
Q Consensus 554 ~kl~DFGla~~~~~~~~-~~~~Gt~ 577 (577)
+||+|||+++....... ....||+
T Consensus 188 ~kl~Dfg~a~~~~~~~~~~~~~gt~ 212 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKDYKLRDRLGTA 212 (504)
T ss_dssp EEECCCTTCEECCTTSCBCCCCSCT
T ss_pred EEEEECCCCEEcCCCCccccccCCc
Confidence 99999999997755432 4455664
No 149
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.93 E-value=8e-26 Score=225.15 Aligned_cols=152 Identities=25% Similarity=0.395 Sum_probs=124.6
Q ss_pred hcCCCccceeccCccceEEEEEEcC----CcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 484 (577)
.++|...+.||+|+||.||+|.+.. +..||+|+++... .....+.|.+|+.++++++||||+++++++. ++..+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 4578888999999999999997743 4579999986532 3445677999999999999999999999984 55789
Q ss_pred EEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcc
Q 008121 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (577)
Q Consensus 485 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~ 564 (577)
+||||+++|+|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 92 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQV---RKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp EEEECCTTEEHHHHHHH---TTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC------
T ss_pred EEEecCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccc
Confidence 99999999999999963 234689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCC
Q 008121 565 TPNT 568 (577)
Q Consensus 565 ~~~~ 568 (577)
....
T Consensus 166 ~~~~ 169 (281)
T 1mp8_A 166 MEDS 169 (281)
T ss_dssp ----
T ss_pred cCcc
Confidence 6543
No 150
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.93 E-value=1.3e-25 Score=232.00 Aligned_cols=165 Identities=24% Similarity=0.306 Sum_probs=138.7
Q ss_pred HHHHHHhhcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCC-----CCceeeEee
Q 008121 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-----HPNIVTLAG 475 (577)
Q Consensus 402 ~~~~~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-----H~niv~l~~ 475 (577)
..+.....++|...+.||+|+||.||+|.. .+++.||||+++.. ....+.+..|++++..++ ||||+++++
T Consensus 27 ~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~ 103 (360)
T 3llt_A 27 WKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI---KKYTRSAKIEADILKKIQNDDINNNNIVKYHG 103 (360)
T ss_dssp CCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred eecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc---hhhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence 333444567899999999999999999987 46889999998642 344566788999999886 999999999
Q ss_pred EEEeCCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC-----
Q 008121 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD----- 550 (577)
Q Consensus 476 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~----- 550 (577)
++...+..++||||+ +++|.+++... ....+++.++..|+.|++.||+|||+. +|+||||||+|||++.
T Consensus 104 ~~~~~~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~ 177 (360)
T 3llt_A 104 KFMYYDHMCLIFEPL-GPSLYEIITRN--NYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEK 177 (360)
T ss_dssp EEEETTEEEEEECCC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCE
T ss_pred eeeECCeeEEEEcCC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccc
Confidence 999999999999999 99999999732 334689999999999999999999999 9999999999999986
Q ss_pred --------------------CCCeEEeccccCcccCCCccccccCC
Q 008121 551 --------------------ELNPHLSDCGLAALTPNTERQVITGT 576 (577)
Q Consensus 551 --------------------~~~~kl~DFGla~~~~~~~~~~~~Gt 576 (577)
++.+||+|||+|+..... .....||
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-~~~~~gt 222 (360)
T 3llt_A 178 SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-HGSIINT 222 (360)
T ss_dssp EEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-CCSCCSC
T ss_pred cccchhcccccccccccccCCCCEEEEeccCceecCCC-CcCccCc
Confidence 789999999999875433 2334454
No 151
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.93 E-value=2.2e-25 Score=225.11 Aligned_cols=164 Identities=29% Similarity=0.378 Sum_probs=130.1
Q ss_pred hhcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccc---hHHHHHHHHHHHHhhcC---CCCceeeEeeEEEeC
Q 008121 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALS---LQEEDNFLEAVSNMSRL---RHPNIVTLAGYCAEH 480 (577)
Q Consensus 408 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l---~H~niv~l~~~~~~~ 480 (577)
..++|...+.||+|+||.||+|.. .+++.||||++...... ......+.+|+++++++ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 457899999999999999999986 56899999998643211 11123456666666655 599999999999876
Q ss_pred C-----eEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeE
Q 008121 481 G-----QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPH 555 (577)
Q Consensus 481 ~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~k 555 (577)
. ..++||||++ |+|.+++... ....+++.++..|+.|++.||+|||+. +|+||||||+|||++.++.+|
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~k 160 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKA--PPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVK 160 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTC--CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEE
Confidence 5 5799999997 6999999732 334599999999999999999999999 999999999999999999999
Q ss_pred EeccccCcccCCCcc-ccccCCC
Q 008121 556 LSDCGLAALTPNTER-QVITGTS 577 (577)
Q Consensus 556 l~DFGla~~~~~~~~-~~~~Gt~ 577 (577)
|+|||+++....... ....||+
T Consensus 161 l~Dfg~a~~~~~~~~~~~~~gt~ 183 (308)
T 3g33_A 161 LADFGLARIYSYQMALTPVVVTL 183 (308)
T ss_dssp ECSCSCTTTSTTCCCSGGGGCCC
T ss_pred EeeCccccccCCCcccCCccccc
Confidence 999999987654433 3345553
No 152
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=8.4e-26 Score=234.05 Aligned_cols=150 Identities=19% Similarity=0.324 Sum_probs=126.8
Q ss_pred hcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCC------
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG------ 481 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------ 481 (577)
.++|...+.||+|+||.||+|.. .+|+.||||++..........+++.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 35788899999999999999987 46899999999655444555678899999999999999999999997653
Q ss_pred eEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEecccc
Q 008121 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (577)
Q Consensus 482 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGl 561 (577)
..|+||||+ +++|.++++. ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 469999999 8899999862 4689999999999999999999999 999999999999999999999999999
Q ss_pred CcccCC
Q 008121 562 AALTPN 567 (577)
Q Consensus 562 a~~~~~ 567 (577)
++....
T Consensus 175 a~~~~~ 180 (367)
T 1cm8_A 175 ARQADS 180 (367)
T ss_dssp CEECCS
T ss_pred cccccc
Confidence 997644
No 153
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.93 E-value=9.6e-26 Score=225.61 Aligned_cols=149 Identities=30% Similarity=0.480 Sum_probs=125.9
Q ss_pred hcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 488 (577)
.++|...+.||+|+||.||+|.+. ..||||+++.........+.|.+|++++++++||||+++++++ ..+..++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 457888999999999999999764 3599999976655566678899999999999999999999965 4556899999
Q ss_pred ecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccC
Q 008121 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (577)
Q Consensus 489 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~ 566 (577)
|+++++|.++++. ....+++.++..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 100 ~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 171 (289)
T 3og7_A 100 WCEGSSLYHHLHA---SETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171 (289)
T ss_dssp CCCEEEHHHHHTT---C---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred ecCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccc
Confidence 9999999999952 346789999999999999999999999 99999999999999999999999999998654
No 154
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.93 E-value=6.4e-26 Score=231.36 Aligned_cols=152 Identities=22% Similarity=0.350 Sum_probs=127.7
Q ss_pred HhhcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEE
Q 008121 407 TATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (577)
Q Consensus 407 ~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 485 (577)
...++|...+.||+|+||.||+|.. .+++.||||+++.........+.+.+|++++++++||||+++++++...+..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 3456789999999999999999976 468999999997654444445678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee-----CCCCCeEEeccc
Q 008121 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL-----DDELNPHLSDCG 560 (577)
Q Consensus 486 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl-----~~~~~~kl~DFG 560 (577)
||||++ |+|.+++.. ...+++..+..|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||
T Consensus 111 v~e~~~-~~L~~~~~~----~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg 182 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDK----NPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFG 182 (329)
T ss_dssp EEECCS-EEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred EEecCC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCC
Confidence 999997 599999963 34689999999999999999999999 99999999999999 455569999999
Q ss_pred cCcccC
Q 008121 561 LAALTP 566 (577)
Q Consensus 561 la~~~~ 566 (577)
+++...
T Consensus 183 ~a~~~~ 188 (329)
T 3gbz_A 183 LARAFG 188 (329)
T ss_dssp HHHHHC
T ss_pred CccccC
Confidence 998754
No 155
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.93 E-value=1.6e-25 Score=226.91 Aligned_cols=153 Identities=27% Similarity=0.397 Sum_probs=133.8
Q ss_pred hhcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEe----CCe
Q 008121 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE----HGQ 482 (577)
Q Consensus 408 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~ 482 (577)
..++|...+.||+|+||.||++.. .+++.||||++... .....+.+.+|++++++++||||+++++++.. ...
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC--CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCce
Confidence 346788899999999999999987 56899999998643 34556789999999999999999999999863 347
Q ss_pred EEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccC
Q 008121 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (577)
Q Consensus 483 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla 562 (577)
.++||||+++|+|.+++.........+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 8999999999999999976555567899999999999999999999999 9999999999999999999999999998
Q ss_pred ccc
Q 008121 563 ALT 565 (577)
Q Consensus 563 ~~~ 565 (577)
+..
T Consensus 182 ~~~ 184 (317)
T 2buj_A 182 NQA 184 (317)
T ss_dssp EES
T ss_pred hhc
Confidence 764
No 156
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.93 E-value=1.9e-25 Score=229.93 Aligned_cols=150 Identities=26% Similarity=0.421 Sum_probs=130.6
Q ss_pred cCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEe--------C
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE--------H 480 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--------~ 480 (577)
++|...+.||+|+||.||+|.. .+++.||||++............+.+|++++++++||||+++++++.. .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5788899999999999999987 568999999986554444445678899999999999999999999977 4
Q ss_pred CeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccc
Q 008121 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (577)
Q Consensus 481 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFG 560 (577)
+..++||||+++ +|.+.+. .....+++.++..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~---~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 169 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLS---NVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 169 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHH---CTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred ceEEEEEeccCC-CHHHHHh---hccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccch
Confidence 468999999975 8888775 2345699999999999999999999999 99999999999999999999999999
Q ss_pred cCcccC
Q 008121 561 LAALTP 566 (577)
Q Consensus 561 la~~~~ 566 (577)
+|+...
T Consensus 170 ~a~~~~ 175 (351)
T 3mi9_A 170 LARAFS 175 (351)
T ss_dssp TCEECC
T ss_pred hccccc
Confidence 998764
No 157
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.93 E-value=1.4e-25 Score=228.62 Aligned_cols=153 Identities=25% Similarity=0.406 Sum_probs=134.2
Q ss_pred hcCCCccceeccCccceEEEEEE-----cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEE--eCC
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF-----ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCA--EHG 481 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~--~~~ 481 (577)
.++|...+.||+|+||.||+|++ .+++.||||++... .....+.+.+|++++++++||||+++++++. ...
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 99 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQ 99 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSC
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCc
Confidence 35678889999999999999984 35889999999754 3445677999999999999999999999987 455
Q ss_pred eEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEecccc
Q 008121 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (577)
Q Consensus 482 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGl 561 (577)
..++||||+++|+|.+++... ...+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred eEEEEEeecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccc
Confidence 789999999999999999642 24589999999999999999999999 999999999999999999999999999
Q ss_pred CcccCCCc
Q 008121 562 AALTPNTE 569 (577)
Q Consensus 562 a~~~~~~~ 569 (577)
++......
T Consensus 174 ~~~~~~~~ 181 (327)
T 3lxl_A 174 AKLLPLDK 181 (327)
T ss_dssp CEECCTTC
T ss_pred ceecccCC
Confidence 99775443
No 158
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.93 E-value=3.6e-25 Score=224.66 Aligned_cols=148 Identities=27% Similarity=0.461 Sum_probs=131.6
Q ss_pred CCccceeccCccceEEEEEEc-----CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeC--CeEE
Q 008121 412 FSQEFLIGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQRL 484 (577)
Q Consensus 412 ~~~~~~lg~G~fg~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~ 484 (577)
|...+.||+|+||.||++.+. +++.||||+++... .....+.|.+|++++++++||||+++++++... ...+
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA-GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc-ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 477889999999999998653 58899999997543 345567899999999999999999999999874 5789
Q ss_pred EEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcc
Q 008121 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (577)
Q Consensus 485 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~ 564 (577)
+||||+++|+|.+++.. ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 112 lv~e~~~~~~L~~~l~~-----~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 183 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPR-----HSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 183 (318)
T ss_dssp EEECCCTTCBHHHHGGG-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEecccCCcHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccc
Confidence 99999999999999962 3489999999999999999999999 999999999999999999999999999998
Q ss_pred cCCC
Q 008121 565 TPNT 568 (577)
Q Consensus 565 ~~~~ 568 (577)
....
T Consensus 184 ~~~~ 187 (318)
T 3lxp_A 184 VPEG 187 (318)
T ss_dssp CCTT
T ss_pred cccc
Confidence 7554
No 159
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.93 E-value=9.3e-26 Score=225.43 Aligned_cols=151 Identities=27% Similarity=0.394 Sum_probs=132.0
Q ss_pred hcCCCccceeccCccceEEEEEEcC-C-------cEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeC
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFAN-G-------KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH 480 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~ 480 (577)
.++|...+.||+|+||.||+|.... + ..||+|++.... ....+.|.+|++++++++||||+++++++...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH--RNYSESFFEAASMMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG--GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence 3567888999999999999997643 3 479999986542 34567799999999999999999999999999
Q ss_pred CeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC-------
Q 008121 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN------- 553 (577)
Q Consensus 481 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~------- 553 (577)
+..++||||+++|+|.++++. ....+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.
T Consensus 85 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 158 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYLKK---NKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPP 158 (289)
T ss_dssp TCCEEEEECCTTCBHHHHHHH---TGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred CCCEEEEECCCCCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccc
Confidence 999999999999999999973 234489999999999999999999999 9999999999999998887
Q ss_pred -eEEeccccCcccCC
Q 008121 554 -PHLSDCGLAALTPN 567 (577)
Q Consensus 554 -~kl~DFGla~~~~~ 567 (577)
+||+|||+++....
T Consensus 159 ~~kl~Dfg~~~~~~~ 173 (289)
T 4fvq_A 159 FIKLSDPGISITVLP 173 (289)
T ss_dssp EEEECCCCSCTTTSC
T ss_pred eeeeccCcccccccC
Confidence 99999999976543
No 160
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.93 E-value=2.4e-26 Score=231.06 Aligned_cols=145 Identities=30% Similarity=0.460 Sum_probs=118.4
Q ss_pred cCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhc--CCCCceeeEeeEEEeCC----eE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR--LRHPNIVTLAGYCAEHG----QR 483 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~~----~~ 483 (577)
++|...+.||+|+||.||+|.+. ++.||||++... ....+.+|.+++.. ++||||+++++++...+ ..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 76 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T-----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc-----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCcccee
Confidence 57889999999999999999875 889999998643 34557778888777 79999999999998776 78
Q ss_pred EEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCeeecCCCCCCeeeCCCCCeE
Q 008121 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH--------EVCLPSVVHRNFKSANILLDDELNPH 555 (577)
Q Consensus 484 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH--------~~~~~~ivHrDlk~~NILl~~~~~~k 555 (577)
++||||+++|+|.++++. ..+++..+.+++.|++.||+||| +. +|+||||||+|||++.++.+|
T Consensus 77 ~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~k 148 (303)
T 3gxj_A 77 WLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCC 148 (303)
T ss_dssp EEEEECCTTCCHHHHHHH-----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-
T ss_pred EEEEeccCCCCHHHHHhc-----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEE
Confidence 999999999999999962 35788889999999999999999 76 999999999999999999999
Q ss_pred EeccccCcccCCC
Q 008121 556 LSDCGLAALTPNT 568 (577)
Q Consensus 556 l~DFGla~~~~~~ 568 (577)
|+|||+++.....
T Consensus 149 l~DFg~a~~~~~~ 161 (303)
T 3gxj_A 149 IADLGLAVRHDSA 161 (303)
T ss_dssp BCCCCC-CCEETT
T ss_pred EeecCcceeccCC
Confidence 9999999865443
No 161
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.93 E-value=1.2e-25 Score=226.60 Aligned_cols=159 Identities=25% Similarity=0.399 Sum_probs=135.4
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
.++|...+.||+|+||.||++... +++.||+|+++... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP--AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVM 85 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc--ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEE
Confidence 356888899999999999999875 68999999987532 233456889999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---CCCCCeEEeccccCcc
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL---DDELNPHLSDCGLAAL 564 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl---~~~~~~kl~DFGla~~ 564 (577)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.
T Consensus 86 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~ 158 (304)
T 2jam_A 86 QLVSGGELFDRILE----RGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM 158 (304)
T ss_dssp CCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCC
T ss_pred EcCCCccHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCccee
Confidence 99999999999863 34689999999999999999999999 99999999999999 7889999999999987
Q ss_pred cCCCccccccCC
Q 008121 565 TPNTERQVITGT 576 (577)
Q Consensus 565 ~~~~~~~~~~Gt 576 (577)
..........||
T Consensus 159 ~~~~~~~~~~~~ 170 (304)
T 2jam_A 159 EQNGIMSTACGT 170 (304)
T ss_dssp CCCBTTHHHHSC
T ss_pred cCCCccccccCC
Confidence 655444444454
No 162
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.93 E-value=9e-26 Score=242.71 Aligned_cols=161 Identities=27% Similarity=0.446 Sum_probs=138.9
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccc-hHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 486 (577)
.++|...+.||+|+||.||+|... +++.||||++...... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 356888899999999999999875 6899999998644322 33467799999999999999999999999999999999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---CCCCCeEEeccccCc
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL---DDELNPHLSDCGLAA 563 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl---~~~~~~kl~DFGla~ 563 (577)
|||+++|+|.+++. ....+++..+..|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++
T Consensus 105 ~e~~~~~~L~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 105 GEVYTGGELFDEII----SRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp ECCCCSCBHHHHHH----TCSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EecCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 99999999999986 345799999999999999999999999 99999999999999 567899999999998
Q ss_pred ccCCCcc-ccccCC
Q 008121 564 LTPNTER-QVITGT 576 (577)
Q Consensus 564 ~~~~~~~-~~~~Gt 576 (577)
....... ...+||
T Consensus 178 ~~~~~~~~~~~~gt 191 (484)
T 3nyv_A 178 HFEASKKMKDKIGT 191 (484)
T ss_dssp HBCCCCSHHHHTTG
T ss_pred EcccccccccCCCC
Confidence 7655433 334455
No 163
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.93 E-value=9.1e-26 Score=249.65 Aligned_cols=146 Identities=27% Similarity=0.422 Sum_probs=128.6
Q ss_pred ceeccCccceEEEEEEc---CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEEecCC
Q 008121 416 FLIGEGSLGRVYRAEFA---NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (577)
Q Consensus 416 ~~lg~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 492 (577)
+.||+|+||.||+|.+. .++.||||+++.........++|.+|+++|++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999663 46789999998665445557789999999999999999999999964 568899999999
Q ss_pred CCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCCCc
Q 008121 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (577)
Q Consensus 493 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~ 569 (577)
|+|.++++ ....+++..+..|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+.+....
T Consensus 454 g~L~~~l~----~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~ 523 (635)
T 4fl3_A 454 GPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 523 (635)
T ss_dssp EEHHHHHH----HCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--
T ss_pred CCHHHHHh----hCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCc
Confidence 99999996 345689999999999999999999999 99999999999999999999999999999775443
No 164
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.93 E-value=8e-26 Score=230.43 Aligned_cols=152 Identities=23% Similarity=0.435 Sum_probs=126.8
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCc----EEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 483 (577)
.++|...+.||+|+||.||+|.+. +++ +||+|.++... .....++|.+|+.++++++||||++++++|.... .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~ 91 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-E
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-e
Confidence 356788899999999999999864 344 46888875432 2344677999999999999999999999998764 7
Q ss_pred EEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCc
Q 008121 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (577)
Q Consensus 484 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~ 563 (577)
++|+||+++|+|.++++. ....+++..++.|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+
T Consensus 92 ~~v~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 92 QLITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEECCTTCBHHHHHHH---STTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred EEEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCccee
Confidence 899999999999999973 345689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCC
Q 008121 564 LTPNT 568 (577)
Q Consensus 564 ~~~~~ 568 (577)
.....
T Consensus 166 ~~~~~ 170 (327)
T 3poz_A 166 LLGAE 170 (327)
T ss_dssp HHTTT
T ss_pred EccCC
Confidence 76543
No 165
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=2.7e-25 Score=227.03 Aligned_cols=153 Identities=27% Similarity=0.381 Sum_probs=127.1
Q ss_pred HHhhcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhc--CCCCceeeEeeEEEeC---
Q 008121 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR--LRHPNIVTLAGYCAEH--- 480 (577)
Q Consensus 406 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~--- 480 (577)
....++|...+.||+|+||.||+|++. ++.||||++... ....+.+|.+++.. ++||||+++++++...
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~ 106 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT-----EEASWFRETEIYQTVLMRHENILGFIAADIKGTGS 106 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc-----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC
Confidence 344578999999999999999999876 899999998532 22334445555444 5999999999999877
Q ss_pred -CeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeeecCCCCCCeeeCCCCCe
Q 008121 481 -GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC-----LPSVVHRNFKSANILLDDELNP 554 (577)
Q Consensus 481 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~-----~~~ivHrDlk~~NILl~~~~~~ 554 (577)
...++||||+++|+|.++++. ..+++..+..++.|++.||+|||+.+ .++|+||||||+|||++.++.+
T Consensus 107 ~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 107 WTQLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp GCEEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred CCceEEEEeccCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCE
Confidence 789999999999999999962 36899999999999999999999762 3479999999999999999999
Q ss_pred EEeccccCcccCCCc
Q 008121 555 HLSDCGLAALTPNTE 569 (577)
Q Consensus 555 kl~DFGla~~~~~~~ 569 (577)
||+|||+++......
T Consensus 182 kl~Dfg~a~~~~~~~ 196 (337)
T 3mdy_A 182 CIADLGLAVKFISDT 196 (337)
T ss_dssp EECCCTTCEECC---
T ss_pred EEEeCCCceeecccc
Confidence 999999998764433
No 166
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=1.1e-25 Score=233.52 Aligned_cols=150 Identities=27% Similarity=0.510 Sum_probs=123.4
Q ss_pred CCCccceeccCccceEEEEEEc--CC--cEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEe-CCeEEE
Q 008121 411 SFSQEFLIGEGSLGRVYRAEFA--NG--KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE-HGQRLL 485 (577)
Q Consensus 411 ~~~~~~~lg~G~fg~Vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-~~~~~l 485 (577)
.|...+.||+|+||.||+|.+. ++ ..||||.++... .....++|.+|+.++++++||||+++++++.. ++..++
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS-CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 3556788999999999999764 22 468999986532 34566789999999999999999999998754 457899
Q ss_pred EEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCccc
Q 008121 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (577)
Q Consensus 486 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~ 565 (577)
||||+++|+|.++++ .....+++.++..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 169 v~e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 242 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIR---NETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM 242 (373)
T ss_dssp EEECCTTCBHHHHHH---CTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEECCCCCCHHHHHh---hcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccc
Confidence 999999999999996 2345688999999999999999999999 9999999999999999999999999999866
Q ss_pred CC
Q 008121 566 PN 567 (577)
Q Consensus 566 ~~ 567 (577)
..
T Consensus 243 ~~ 244 (373)
T 3c1x_A 243 YD 244 (373)
T ss_dssp --
T ss_pred cc
Confidence 44
No 167
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.93 E-value=1.8e-25 Score=223.85 Aligned_cols=152 Identities=27% Similarity=0.412 Sum_probs=130.2
Q ss_pred cCCCccc-eeccCccceEEEEEEc---CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEE
Q 008121 410 NSFSQEF-LIGEGSLGRVYRAEFA---NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (577)
Q Consensus 410 ~~~~~~~-~lg~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 485 (577)
++|...+ .||+|+||.||+|.+. +++.||||+++.........+++.+|+++++.++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 4566666 8999999999999653 368899999976544444567899999999999999999999999 5667899
Q ss_pred EEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCccc
Q 008121 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (577)
Q Consensus 486 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~ 565 (577)
||||+++|+|.++++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 95 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 167 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167 (291)
T ss_dssp EEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEeCCCCCHHHHHHh----CcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence 9999999999999973 35689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCc
Q 008121 566 PNTE 569 (577)
Q Consensus 566 ~~~~ 569 (577)
....
T Consensus 168 ~~~~ 171 (291)
T 1xbb_A 168 RADE 171 (291)
T ss_dssp CTTC
T ss_pred ccCC
Confidence 5443
No 168
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.92 E-value=3e-25 Score=229.76 Aligned_cols=166 Identities=26% Similarity=0.382 Sum_probs=141.0
Q ss_pred HHHhhcCCCccceeccCccceEEEEEEc-CCcEEEEEEcccccc--c----hHHHHHHHHHHHHhhcC-CCCceeeEeeE
Q 008121 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL--S----LQEEDNFLEAVSNMSRL-RHPNIVTLAGY 476 (577)
Q Consensus 405 ~~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~----~~~~~~~~~e~~~l~~l-~H~niv~l~~~ 476 (577)
.....++|...+.||+|+||.||+|.+. +|+.||||+++.... . ....+.+.+|+.++.++ +||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 3445567999999999999999999885 699999999864321 1 12245688999999999 79999999999
Q ss_pred EEeCCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEE
Q 008121 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHL 556 (577)
Q Consensus 477 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl 556 (577)
+...+..++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||+++++.+||
T Consensus 169 ~~~~~~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl 241 (365)
T 2y7j_A 169 YESSSFMFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRL 241 (365)
T ss_dssp EEBSSEEEEEECCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEE
T ss_pred EeeCCEEEEEEEeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEE
Confidence 9999999999999999999999963 35689999999999999999999999 9999999999999999999999
Q ss_pred eccccCcccCCCcc-ccccCCC
Q 008121 557 SDCGLAALTPNTER-QVITGTS 577 (577)
Q Consensus 557 ~DFGla~~~~~~~~-~~~~Gt~ 577 (577)
+|||+++....... ...+||+
T Consensus 242 ~DfG~~~~~~~~~~~~~~~gt~ 263 (365)
T 2y7j_A 242 SDFGFSCHLEPGEKLRELCGTP 263 (365)
T ss_dssp CCCTTCEECCTTCCBCCCCSCG
T ss_pred EecCcccccCCCcccccCCCCC
Confidence 99999987654432 3455653
No 169
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.92 E-value=2e-25 Score=222.21 Aligned_cols=151 Identities=26% Similarity=0.376 Sum_probs=133.4
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccch----HHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL----QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 484 (577)
++|...+.||+|+||.||+|... +++.||+|.++...... ...+.+.+|+.++++++||||+++++++...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46888899999999999999876 58999999986543221 13567999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC----CeEEeccc
Q 008121 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL----NPHLSDCG 560 (577)
Q Consensus 485 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~----~~kl~DFG 560 (577)
+||||+++++|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 85 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 85 LILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEeecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 99999999999999963 35689999999999999999999999 999999999999999877 89999999
Q ss_pred cCcccCC
Q 008121 561 LAALTPN 567 (577)
Q Consensus 561 la~~~~~ 567 (577)
+++....
T Consensus 158 ~~~~~~~ 164 (283)
T 3bhy_A 158 IAHKIEA 164 (283)
T ss_dssp TCEECC-
T ss_pred cceeccC
Confidence 9987644
No 170
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.92 E-value=1.6e-25 Score=222.09 Aligned_cols=152 Identities=27% Similarity=0.446 Sum_probs=134.4
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEcccccc-chHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
++|...+.||+|+||.||+|... +++.||||++..... .....+.+.+|+++++.++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 57888899999999999999875 689999999864321 1223567899999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 91 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 91 EYVSGGELFDYICK----HGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp ECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred eccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 99999999999963 34689999999999999999999999 999999999999999999999999999987654
Q ss_pred C
Q 008121 568 T 568 (577)
Q Consensus 568 ~ 568 (577)
.
T Consensus 164 ~ 164 (276)
T 2h6d_A 164 G 164 (276)
T ss_dssp -
T ss_pred C
Confidence 3
No 171
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=2.1e-25 Score=227.96 Aligned_cols=151 Identities=25% Similarity=0.453 Sum_probs=129.2
Q ss_pred cCCCccceeccCccceEEEEEEcC-----CcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFAN-----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 484 (577)
.+|...+.||+|+||.||+|.+.. +..||||+++... ......+|.+|++++++++||||+++++++...+..+
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 456778899999999999997643 2469999997543 3445667999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcc
Q 008121 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (577)
Q Consensus 485 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~ 564 (577)
+||||+++|+|.+++.. ....+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 123 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 123 IITEYMENGALDKFLRE---KDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEEECCTTEEHHHHHHH---TTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 99999999999999963 345789999999999999999999999 999999999999999999999999999987
Q ss_pred cCC
Q 008121 565 TPN 567 (577)
Q Consensus 565 ~~~ 567 (577)
...
T Consensus 197 ~~~ 199 (333)
T 1mqb_A 197 LED 199 (333)
T ss_dssp ---
T ss_pred hcc
Confidence 654
No 172
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.92 E-value=2.3e-25 Score=223.69 Aligned_cols=149 Identities=28% Similarity=0.454 Sum_probs=131.8
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEe--------
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE-------- 479 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-------- 479 (577)
.++|...+.||+|+||.||+|... +++.||||++... ....+.+.+|++++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT---EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM 81 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc---HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence 456888999999999999999874 6899999998542 3456779999999999999999999998865
Q ss_pred -----CCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCe
Q 008121 480 -----HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNP 554 (577)
Q Consensus 480 -----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~ 554 (577)
.+..++||||+++|+|.++++. ....+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+
T Consensus 82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~ 155 (303)
T 1zy4_A 82 TAVKKKSTLFIQMEYCENGTLYDLIHS---ENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNV 155 (303)
T ss_dssp ----CEEEEEEEEECCCSCBHHHHHHH---SCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCE
T ss_pred cccccCCceEEEEecCCCCCHHHhhhc---cccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCE
Confidence 3568999999999999999963 235678899999999999999999999 99999999999999999999
Q ss_pred EEeccccCcccC
Q 008121 555 HLSDCGLAALTP 566 (577)
Q Consensus 555 kl~DFGla~~~~ 566 (577)
||+|||+++...
T Consensus 156 kl~dfg~~~~~~ 167 (303)
T 1zy4_A 156 KIGDFGLAKNVH 167 (303)
T ss_dssp EECCCCCCSCTT
T ss_pred EEeeCcchhhcc
Confidence 999999998764
No 173
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.92 E-value=1.5e-25 Score=229.66 Aligned_cols=157 Identities=24% Similarity=0.380 Sum_probs=132.5
Q ss_pred hhcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHH-hhcCCCCceeeEeeEEEeCCeEEE
Q 008121 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLAGYCAEHGQRLL 485 (577)
Q Consensus 408 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~-l~~l~H~niv~l~~~~~~~~~~~l 485 (577)
..++|...+.||+|+||.||+|.. .+|+.||||+++...... ...++..|..+ ++.++||||+++++++...+..++
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ-EQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCH-HHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcH-HHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 346788889999999999999986 568999999997654333 34445555554 788899999999999999999999
Q ss_pred EEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCccc
Q 008121 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (577)
Q Consensus 486 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~ 565 (577)
||||+++ +|.+++.........+++..+..|+.|++.||+|||+.. +|+||||||+|||++.++.+||+|||+++..
T Consensus 128 v~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 128 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp EECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred EHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 9999975 999988754345678999999999999999999999742 8999999999999999999999999999876
Q ss_pred CCC
Q 008121 566 PNT 568 (577)
Q Consensus 566 ~~~ 568 (577)
...
T Consensus 205 ~~~ 207 (340)
T 3an0_A 205 VDS 207 (340)
T ss_dssp SCH
T ss_pred ccc
Confidence 543
No 174
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.92 E-value=2.4e-25 Score=223.53 Aligned_cols=152 Identities=27% Similarity=0.486 Sum_probs=130.8
Q ss_pred cCCCccceeccCccceEEEEEEcC----CcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEE-eCCeEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCA-EHGQRL 484 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~-~~~~~~ 484 (577)
.+|...+.||+|+||.||+|.+.+ ...||+|.+.... .....+.+.+|++++++++||||+++++++. .++..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC-CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 457778899999999999997643 2368999987532 3455678999999999999999999999865 456789
Q ss_pred EEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcc
Q 008121 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (577)
Q Consensus 485 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~ 564 (577)
+||||+++|+|.++++ .....+++.++..|+.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~v~e~~~~~~L~~~l~---~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIR---NETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARD 177 (298)
T ss_dssp EEEECCTTCBHHHHHH---CTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred EEEeCCCCCCHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccc
Confidence 9999999999999996 2356689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCC
Q 008121 565 TPNT 568 (577)
Q Consensus 565 ~~~~ 568 (577)
....
T Consensus 178 ~~~~ 181 (298)
T 3f66_A 178 MYDK 181 (298)
T ss_dssp CSCG
T ss_pred cccc
Confidence 6543
No 175
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.92 E-value=7.7e-26 Score=230.33 Aligned_cols=152 Identities=25% Similarity=0.418 Sum_probs=128.5
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcE----EEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKI----MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 484 (577)
++|...+.||+|+||.||+|.+. +++. ||+|.+.... .......+.+|+.++++++||||+++++++. .+..+
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT-SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc-cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 46778899999999999999864 3443 7888775432 1223345778999999999999999999986 45789
Q ss_pred EEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcc
Q 008121 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (577)
Q Consensus 485 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~ 564 (577)
+||||+++|+|.+++.. ....+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 91 ~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQ---HRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp EEEECCTTCBSHHHHHS---SGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred EEEEeCCCCCHHHHHHH---ccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccc
Confidence 99999999999999962 235789999999999999999999999 999999999999999999999999999998
Q ss_pred cCCCc
Q 008121 565 TPNTE 569 (577)
Q Consensus 565 ~~~~~ 569 (577)
.....
T Consensus 165 ~~~~~ 169 (325)
T 3kex_A 165 LPPDD 169 (325)
T ss_dssp SCCCT
T ss_pred cCccc
Confidence 75443
No 176
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.92 E-value=1.6e-25 Score=231.49 Aligned_cols=160 Identities=24% Similarity=0.327 Sum_probs=134.6
Q ss_pred cHHHHHHhhcCCCccceeccCccceEEEEEEcCCcEEEEEEcccccc---------chHHHHHHHHHHHHhhcCCCCcee
Q 008121 401 TVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAAL---------SLQEEDNFLEAVSNMSRLRHPNIV 471 (577)
Q Consensus 401 ~~~~~~~~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~---------~~~~~~~~~~e~~~l~~l~H~niv 471 (577)
.+.++....++|...+.||+|+||.||+|...+++.||||++..... .....+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 35677788899999999999999999999888899999999864321 122347799999999999999999
Q ss_pred eEeeEEEeC-----CeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCe
Q 008121 472 TLAGYCAEH-----GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANI 546 (577)
Q Consensus 472 ~l~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NI 546 (577)
++++++... ...|+||||++ |+|.+.+. .....+++..+..|+.|++.||.|||+. +|+||||||+||
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NI 165 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIH---DQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNI 165 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHH---CTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHE
Confidence 999998542 36899999997 68988886 2345799999999999999999999999 999999999999
Q ss_pred eeCCCCCeEEeccccCcccCC
Q 008121 547 LLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 547 Ll~~~~~~kl~DFGla~~~~~ 567 (577)
|++.++.+||+|||+++....
T Consensus 166 l~~~~~~~kl~Dfg~~~~~~~ 186 (362)
T 3pg1_A 166 LLADNNDITICDFNLAREDTA 186 (362)
T ss_dssp EECTTCCEEECCTTC------
T ss_pred EEcCCCCEEEEecCccccccc
Confidence 999999999999999986443
No 177
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.92 E-value=2.5e-25 Score=223.38 Aligned_cols=151 Identities=26% Similarity=0.410 Sum_probs=129.8
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 488 (577)
++|...+.||+|+||.||+|... +++.||||+++.........+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 46888899999999999999875 68999999986543333334678899999999999999999999999999999999
Q ss_pred ecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccC
Q 008121 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (577)
Q Consensus 489 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~ 566 (577)
|++ |+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 83 ~~~-~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 154 (299)
T 2r3i_A 83 FLH-QDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154 (299)
T ss_dssp CCS-EEHHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHC
T ss_pred ccc-CCHHHHHHhh--hccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhcc
Confidence 997 6999998743 335689999999999999999999999 99999999999999999999999999998654
No 178
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=2.8e-25 Score=222.81 Aligned_cols=150 Identities=27% Similarity=0.462 Sum_probs=129.7
Q ss_pred CCCccceeccCccceEEEEEEcC-C---cEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeE-EE
Q 008121 411 SFSQEFLIGEGSLGRVYRAEFAN-G---KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR-LL 485 (577)
Q Consensus 411 ~~~~~~~lg~G~fg~Vy~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~-~l 485 (577)
.|...+.||+|+||.||+|.+.+ + ..||+|++.... .....+.|.+|++++++++||||+++++++...+.. ++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 100 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT-EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV 100 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc-cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence 34556889999999999997643 2 379999987532 345567899999999999999999999999876655 99
Q ss_pred EEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCccc
Q 008121 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (577)
Q Consensus 486 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~ 565 (577)
||||+.+|+|.++++. ....+++.++..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 101 v~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 174 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRS---PQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDI 174 (298)
T ss_dssp EECCCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred EEecccCCCHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence 9999999999999962 356789999999999999999999999 9999999999999999999999999999865
Q ss_pred CC
Q 008121 566 PN 567 (577)
Q Consensus 566 ~~ 567 (577)
..
T Consensus 175 ~~ 176 (298)
T 3pls_A 175 LD 176 (298)
T ss_dssp TT
T ss_pred cC
Confidence 44
No 179
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.92 E-value=2.8e-25 Score=227.78 Aligned_cols=156 Identities=28% Similarity=0.342 Sum_probs=131.4
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcC-CCCceeeEeeEEEeCCeEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 486 (577)
.++|...+.||+|+||.||+|... +++.||||+++.... .+.+|++++.++ +||||+++++++.+.+..|+|
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv 94 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVV 94 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEE
Confidence 456888899999999999999875 588999999965422 234678888777 799999999999999999999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC----CCeEEeccccC
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE----LNPHLSDCGLA 562 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~----~~~kl~DFGla 562 (577)
|||+++|+|.+++. ....+++.++..++.|++.||+|||+. +|+||||||+|||+.++ +.+||+|||++
T Consensus 95 ~E~~~gg~L~~~i~----~~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a 167 (342)
T 2qr7_A 95 TELMKGGELLDKIL----RQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFA 167 (342)
T ss_dssp ECCCCSCBHHHHHH----TCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTC
T ss_pred EeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCc
Confidence 99999999999996 345799999999999999999999999 99999999999998543 35999999999
Q ss_pred cccCCCc--cccccCCC
Q 008121 563 ALTPNTE--RQVITGTS 577 (577)
Q Consensus 563 ~~~~~~~--~~~~~Gt~ 577 (577)
+...... ....+||+
T Consensus 168 ~~~~~~~~~~~~~~gt~ 184 (342)
T 2qr7_A 168 KQLRAENGLLMTPCYTA 184 (342)
T ss_dssp EECBCTTCCBCCSSCCS
T ss_pred ccCcCCCCceeccCCCc
Confidence 9765443 23445653
No 180
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.92 E-value=5.9e-25 Score=221.29 Aligned_cols=151 Identities=26% Similarity=0.426 Sum_probs=134.9
Q ss_pred hcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
.+.|...+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 99 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC-STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 34678889999999999999976 4688999999865432 334677999999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||+++++|.+++. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 100 e~~~~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 100 EYLGGGSALDLLE-----PGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp ECCTTEEHHHHHT-----TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred EeCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCc
Confidence 9999999999985 35689999999999999999999999 999999999999999999999999999987654
Q ss_pred C
Q 008121 568 T 568 (577)
Q Consensus 568 ~ 568 (577)
.
T Consensus 172 ~ 172 (303)
T 3a7i_A 172 T 172 (303)
T ss_dssp T
T ss_pred c
Confidence 4
No 181
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.92 E-value=2e-25 Score=227.54 Aligned_cols=167 Identities=19% Similarity=0.295 Sum_probs=137.0
Q ss_pred HHHhhcCCCcc-ceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCC-CCceeeEeeEEEeCC
Q 008121 405 LQTATNSFSQE-FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHG 481 (577)
Q Consensus 405 ~~~~~~~~~~~-~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~ 481 (577)
.....+.|... +.||+|+||.||+|... +++.||+|+++..........++.+|+.++.+++ ||||+++++++...+
T Consensus 23 ~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~ 102 (327)
T 3lm5_A 23 MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTS 102 (327)
T ss_dssp HHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred HHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC
Confidence 34445566666 88999999999999775 5899999999765444445677899999999995 699999999999999
Q ss_pred eEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC---CCCeEEec
Q 008121 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---ELNPHLSD 558 (577)
Q Consensus 482 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~---~~~~kl~D 558 (577)
..++||||+++|+|.+++.. .....+++.++..|+.|++.||+|||+. +|+||||||+|||++. ++.+||+|
T Consensus 103 ~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~D 177 (327)
T 3lm5_A 103 EIILILEYAAGGEIFSLCLP--ELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVD 177 (327)
T ss_dssp EEEEEEECCTTEEGGGGGSS--CC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECC
T ss_pred eEEEEEEecCCCcHHHHHHH--hcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEee
Confidence 99999999999999999852 2346799999999999999999999999 9999999999999998 78999999
Q ss_pred cccCcccCCCcc-ccccCC
Q 008121 559 CGLAALTPNTER-QVITGT 576 (577)
Q Consensus 559 FGla~~~~~~~~-~~~~Gt 576 (577)
||+++....... ....||
T Consensus 178 fg~a~~~~~~~~~~~~~gt 196 (327)
T 3lm5_A 178 FGMSRKIGHACELREIMGT 196 (327)
T ss_dssp GGGCEEC---------CCC
T ss_pred CccccccCCccccccccCC
Confidence 999997654432 233454
No 182
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.92 E-value=2e-25 Score=222.27 Aligned_cols=149 Identities=23% Similarity=0.417 Sum_probs=130.7
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEe--------
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE-------- 479 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-------- 479 (577)
.++|...+.||+|+||.||+|... +++.||+|+++... +.+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 456888999999999999999885 68999999986432 246789999999999999999998854
Q ss_pred --------CCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC
Q 008121 480 --------HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (577)
Q Consensus 480 --------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~ 551 (577)
....++||||+++|+|.++++.. ....+++..+..++.|++.||.|||+. +|+||||||+||+++++
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~ 158 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR--RGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDT 158 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHG--GGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEET
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCC
Confidence 34579999999999999999743 235689999999999999999999999 99999999999999999
Q ss_pred CCeEEeccccCcccCCC
Q 008121 552 LNPHLSDCGLAALTPNT 568 (577)
Q Consensus 552 ~~~kl~DFGla~~~~~~ 568 (577)
+.+||+|||+++.....
T Consensus 159 ~~~kl~Dfg~~~~~~~~ 175 (284)
T 2a19_B 159 KQVKIGDFGLVTSLKND 175 (284)
T ss_dssp TEEEECCCTTCEESSCC
T ss_pred CCEEECcchhheecccc
Confidence 99999999999876554
No 183
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=5.5e-25 Score=219.77 Aligned_cols=150 Identities=23% Similarity=0.403 Sum_probs=130.8
Q ss_pred CCCccc-eeccCccceEEEEEEc---CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEE
Q 008121 411 SFSQEF-LIGEGSLGRVYRAEFA---NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 411 ~~~~~~-~lg~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 486 (577)
+|...+ .||+|+||.||+|.+. +++.||||+++... .....+++.+|++++++++||||+++++++ ..+..++|
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc-chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 444444 8999999999999763 57889999997642 345567899999999999999999999999 55678999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccC
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~ 566 (577)
|||+++|+|.+++. .....+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 88 ~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 88 MEMAGGGPLHKFLV---GKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp EECCTTEEHHHHHT---TCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred EEeCCCCCHHHHHH---hCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 99999999999995 2345699999999999999999999999 99999999999999999999999999999765
Q ss_pred CC
Q 008121 567 NT 568 (577)
Q Consensus 567 ~~ 568 (577)
..
T Consensus 162 ~~ 163 (287)
T 1u59_A 162 AD 163 (287)
T ss_dssp TC
T ss_pred cC
Confidence 43
No 184
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.92 E-value=1.6e-25 Score=226.59 Aligned_cols=161 Identities=24% Similarity=0.400 Sum_probs=136.2
Q ss_pred HHHHhhcCCCccceeccCccceEEEEEE------cCCcEEEEEEccccccchHHHHHHHHHHHHhhcC-CCCceeeEeeE
Q 008121 404 SLQTATNSFSQEFLIGEGSLGRVYRAEF------ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGY 476 (577)
Q Consensus 404 ~~~~~~~~~~~~~~lg~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~ 476 (577)
......++|...+.||+|+||.||+|.+ .+++.||||+++... .....+.+.+|+.++.++ +||||++++++
T Consensus 21 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 99 (316)
T 2xir_A 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGA 99 (316)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred ceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC-CcHHHHHHHHHHHHHHhcccCCCeeeEEEE
Confidence 3444567899999999999999999975 346889999997543 344566799999999999 79999999999
Q ss_pred EEeCC-eEEEEEEecCCCCHHHhhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 008121 477 CAEHG-QRLLVYEYVGNGNLHDMLHFADDS------------SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKS 543 (577)
Q Consensus 477 ~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~ 543 (577)
+...+ ..++||||+++|+|.+++...... ...+++..+..++.|+++||.|||+. +|+||||||
T Consensus 100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp 176 (316)
T 2xir_A 100 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 176 (316)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred EecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCcc
Confidence 87755 589999999999999999743221 22388999999999999999999999 999999999
Q ss_pred CCeeeCCCCCeEEeccccCcccCCC
Q 008121 544 ANILLDDELNPHLSDCGLAALTPNT 568 (577)
Q Consensus 544 ~NILl~~~~~~kl~DFGla~~~~~~ 568 (577)
+||+++.++.+||+|||+++.....
T Consensus 177 ~Nil~~~~~~~kl~Dfg~~~~~~~~ 201 (316)
T 2xir_A 177 RNILLSEKNVVKICDFGLARDIYKD 201 (316)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTC
T ss_pred ceEEECCCCCEEECCCccccccccC
Confidence 9999999999999999999876443
No 185
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.92 E-value=2.3e-25 Score=232.22 Aligned_cols=154 Identities=26% Similarity=0.341 Sum_probs=127.7
Q ss_pred HHhhcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeC----
Q 008121 406 QTATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH---- 480 (577)
Q Consensus 406 ~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~---- 480 (577)
....++|...+.||+|+||.||+|.. .+|+.||||++.... ....+|+++++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP------RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT------TSCCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHHcCCCCccchhheeeecCccc
Confidence 34567899999999999999999976 568999999986432 1234689999999999999999998443
Q ss_pred ----------------------------------CeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHH
Q 008121 481 ----------------------------------GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALE 526 (577)
Q Consensus 481 ----------------------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~ 526 (577)
...++||||++ |+|.+.++........+++..+..++.|+++||+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp ---------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 34889999998 5888888654345678999999999999999999
Q ss_pred HHhcCCCCCeeecCCCCCCeeeC-CCCCeEEeccccCcccCCCc
Q 008121 527 YLHEVCLPSVVHRNFKSANILLD-DELNPHLSDCGLAALTPNTE 569 (577)
Q Consensus 527 yLH~~~~~~ivHrDlk~~NILl~-~~~~~kl~DFGla~~~~~~~ 569 (577)
|||+. +|+||||||+|||++ +++.+||+|||+|+......
T Consensus 156 ~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~ 196 (383)
T 3eb0_A 156 FIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE 196 (383)
T ss_dssp HHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS
T ss_pred HHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC
Confidence 99999 999999999999998 68899999999999764443
No 186
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.92 E-value=3.6e-25 Score=223.73 Aligned_cols=153 Identities=24% Similarity=0.344 Sum_probs=131.4
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccc-hHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 486 (577)
.++|...+.||+|+||.||+|... +++.||+|++...... ....+.+.+|+.++.+++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 367888999999999999999875 6889999998754322 33457789999999999999999999999999999999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccC
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~ 566 (577)
|||+++++|.++++. ...+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 113 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 113 MRLINGVDLAAMLRR----QGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EECCCCEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEecCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 999999999999973 34689999999999999999999999 99999999999999999999999999998765
Q ss_pred CC
Q 008121 567 NT 568 (577)
Q Consensus 567 ~~ 568 (577)
..
T Consensus 186 ~~ 187 (309)
T 2h34_A 186 DE 187 (309)
T ss_dssp --
T ss_pred cc
Confidence 43
No 187
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.92 E-value=2.8e-25 Score=232.74 Aligned_cols=155 Identities=20% Similarity=0.292 Sum_probs=121.7
Q ss_pred CCCcc-ceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHh-hcCCCCceeeEeeEEEe----CCeE
Q 008121 411 SFSQE-FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNM-SRLRHPNIVTLAGYCAE----HGQR 483 (577)
Q Consensus 411 ~~~~~-~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l-~~l~H~niv~l~~~~~~----~~~~ 483 (577)
+|... +.||+|+||.||+|... +++.||||+++.. ..+.+|++++ +..+||||+++++++.. .+..
T Consensus 62 ~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 44444 68999999999999775 5889999998532 2356788776 44589999999999865 5578
Q ss_pred EEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC---CCCeEEeccc
Q 008121 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---ELNPHLSDCG 560 (577)
Q Consensus 484 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~---~~~~kl~DFG 560 (577)
|+||||+++|+|.++++. .....+++.++..|+.||+.||+|||+. +|+||||||+|||++. ++.+||+|||
T Consensus 135 ~lv~E~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp EEEEECCCSEEHHHHHHC--C---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEeCCCCcHHHHHHH--hCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecc
Confidence 999999999999999973 2235699999999999999999999999 9999999999999997 7899999999
Q ss_pred cCcccCCCcc-ccccCCC
Q 008121 561 LAALTPNTER-QVITGTS 577 (577)
Q Consensus 561 la~~~~~~~~-~~~~Gt~ 577 (577)
+++....... ...+||+
T Consensus 210 ~a~~~~~~~~~~~~~gt~ 227 (400)
T 1nxk_A 210 FAKETTSHNSLTTPCYTP 227 (400)
T ss_dssp TCEECC-----------C
T ss_pred cccccCCCCccccCCCCC
Confidence 9997654332 3444553
No 188
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.92 E-value=5.1e-25 Score=220.07 Aligned_cols=145 Identities=13% Similarity=0.125 Sum_probs=128.1
Q ss_pred cCCCccceeccCccceEEEEEEcC-CcEEEEEEccccccc-hHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
++|...+.||+|+||.||+|.... ++.||||++...... ....+.|.+|+..+++++||||+++++++...+..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 568888999999999999998754 899999999765332 344578999999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCc
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~ 563 (577)
||+++++|.++++. . ....++.+|+.|++.||+|||+. +|+||||||+|||+++++.+||+++|...
T Consensus 111 e~~~g~~L~~~l~~-----~-~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~~~~ 177 (286)
T 3uqc_A 111 EWIRGGSLQEVADT-----S-PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPATMP 177 (286)
T ss_dssp ECCCEEEHHHHHTT-----C-CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCCCCT
T ss_pred EecCCCCHHHHHhc-----C-CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEeccccC
Confidence 99999999999951 2 35567899999999999999999 99999999999999999999999887654
No 189
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.92 E-value=3.8e-25 Score=224.01 Aligned_cols=148 Identities=23% Similarity=0.340 Sum_probs=128.0
Q ss_pred cCCCc-cceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcC-CCCceeeEeeEEEeCCeEEEE
Q 008121 410 NSFSQ-EFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 410 ~~~~~-~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 486 (577)
+.|.+ .+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++.++ +||||+++++++.+.+..++|
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv 89 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLV 89 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence 45666 47899999999999976 468999999986542 23456789999999885 799999999999999999999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC---eEEeccccCc
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN---PHLSDCGLAA 563 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~---~kl~DFGla~ 563 (577)
|||+++|+|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++
T Consensus 90 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~ 162 (316)
T 2ac3_A 90 FEKMRGGSILSHIHK----RRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGS 162 (316)
T ss_dssp EECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred EEcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence 999999999999973 35689999999999999999999999 9999999999999998776 9999999998
Q ss_pred ccC
Q 008121 564 LTP 566 (577)
Q Consensus 564 ~~~ 566 (577)
...
T Consensus 163 ~~~ 165 (316)
T 2ac3_A 163 GIK 165 (316)
T ss_dssp ---
T ss_pred ccc
Confidence 654
No 190
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=2.3e-25 Score=228.84 Aligned_cols=153 Identities=29% Similarity=0.420 Sum_probs=126.9
Q ss_pred hhcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccch---HHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeE
Q 008121 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL---QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (577)
Q Consensus 408 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 483 (577)
..++|...+.||+|+||.||+|... +|+.||||++....... ...+.+.+|++++++++||||+++++++...+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 3567999999999999999999875 58999999996532211 1124688999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCc
Q 008121 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (577)
Q Consensus 484 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~ 563 (577)
++||||+++ +|.+++. .....+++.++..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 88 ~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIK---DNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp EEEEECCSE-EHHHHHT---TCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred EEEEEcCCC-CHHHHHH---hcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 999999985 8988885 2345688999999999999999999999 99999999999999999999999999998
Q ss_pred ccCC
Q 008121 564 LTPN 567 (577)
Q Consensus 564 ~~~~ 567 (577)
....
T Consensus 161 ~~~~ 164 (346)
T 1ua2_A 161 SFGS 164 (346)
T ss_dssp TTTS
T ss_pred eccC
Confidence 7643
No 191
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.92 E-value=2.5e-25 Score=245.42 Aligned_cols=144 Identities=25% Similarity=0.421 Sum_probs=126.9
Q ss_pred eeccCccceEEEEEEc---CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEEecCCC
Q 008121 417 LIGEGSLGRVYRAEFA---NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNG 493 (577)
Q Consensus 417 ~lg~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 493 (577)
.||+|+||.||+|.+. ++..||||+++... .....++|.+|+++|++++|||||+++++|.. +..++||||+++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCC-SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCC
Confidence 7999999999999774 45679999997542 33456789999999999999999999999976 5689999999999
Q ss_pred CHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCCC
Q 008121 494 NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (577)
Q Consensus 494 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~~ 568 (577)
+|.++++. ....+++..+..|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+++.....
T Consensus 421 ~L~~~l~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~ 489 (613)
T 2ozo_A 421 PLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGAD 489 (613)
T ss_dssp BHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--
T ss_pred cHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCC
Confidence 99999962 355799999999999999999999999 9999999999999999999999999999976543
No 192
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.92 E-value=1.5e-25 Score=232.00 Aligned_cols=153 Identities=22% Similarity=0.318 Sum_probs=126.2
Q ss_pred hhcCCCccceeccCccceEEEEEEcC------CcEEEEEEccccccchHHH---------HHHHHHHHHhhcCCCCceee
Q 008121 408 ATNSFSQEFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEE---------DNFLEAVSNMSRLRHPNIVT 472 (577)
Q Consensus 408 ~~~~~~~~~~lg~G~fg~Vy~~~~~~------~~~vavK~~~~~~~~~~~~---------~~~~~e~~~l~~l~H~niv~ 472 (577)
..++|...+.||+|+||.||+|.+.. ++.||||++.........+ ..+..|+..+..++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34578889999999999999998765 4789999986442111111 23445667788899999999
Q ss_pred EeeEEEeC----CeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee
Q 008121 473 LAGYCAEH----GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL 548 (577)
Q Consensus 473 l~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl 548 (577)
+++++... ...++||||+ +|+|.++++. ....+++.+++.|+.|++.||+|||+. +|+||||||+|||+
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~---~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill 185 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA---NAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLL 185 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEE
Confidence 99998764 4589999999 9999999963 346799999999999999999999999 99999999999999
Q ss_pred C--CCCCeEEeccccCcccCC
Q 008121 549 D--DELNPHLSDCGLAALTPN 567 (577)
Q Consensus 549 ~--~~~~~kl~DFGla~~~~~ 567 (577)
+ .++.+||+|||+|+.+..
T Consensus 186 ~~~~~~~~kl~DFG~a~~~~~ 206 (364)
T 3op5_A 186 NYKNPDQVYLVDYGLAYRYCP 206 (364)
T ss_dssp ESSCTTCEEECCCTTCEESSG
T ss_pred ecCCCCeEEEEECCcceeccc
Confidence 9 889999999999987643
No 193
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.92 E-value=4.7e-26 Score=236.91 Aligned_cols=154 Identities=16% Similarity=0.216 Sum_probs=126.4
Q ss_pred hcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccc-cchHHHHHHHHHH---HHhhcCCCCceeeEe-------eE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAA-LSLQEEDNFLEAV---SNMSRLRHPNIVTLA-------GY 476 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~e~---~~l~~l~H~niv~l~-------~~ 476 (577)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ......+.|.+|+ +.+++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788889999999999999986 568999999986432 2234567789999 556667899999998 66
Q ss_pred EEeCC-----------------eEEEEEEecCCCCHHHhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 008121 477 CAEHG-----------------QRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGTARALEYLHEVCLPSV 536 (577)
Q Consensus 477 ~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~i 536 (577)
+...+ ..|+||||+ +|+|.++++.... ....+++..+..|+.|+++||+|||+. +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 65543 278999999 6899999974321 123455688999999999999999999 99
Q ss_pred eecCCCCCCeeeCCCCCeEEeccccCcccC
Q 008121 537 VHRNFKSANILLDDELNPHLSDCGLAALTP 566 (577)
Q Consensus 537 vHrDlk~~NILl~~~~~~kl~DFGla~~~~ 566 (577)
+||||||+|||++.++.+||+|||+|+...
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~ 257 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDG 257 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETT
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecC
Confidence 999999999999999999999999999643
No 194
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.92 E-value=3.6e-25 Score=225.49 Aligned_cols=152 Identities=30% Similarity=0.544 Sum_probs=129.9
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcE--EEEEEccccccchHHHHHHHHHHHHhhcC-CCCceeeEeeEEEeCCeEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKI--MAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 485 (577)
++|...+.||+|+||.||+|... ++.. ||+|.++... .....+.+.+|+++++++ +||||+++++++...+..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc-chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 56888899999999999999764 4654 4999886432 334456789999999999 89999999999999999999
Q ss_pred EEEecCCCCHHHhhhhcc------------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC
Q 008121 486 VYEYVGNGNLHDMLHFAD------------DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN 553 (577)
Q Consensus 486 v~e~~~~g~L~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~ 553 (577)
||||+++|+|.+++.... .....+++.+++.++.|++.||+|||+. +|+||||||+|||++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence 999999999999997432 2235799999999999999999999999 9999999999999999999
Q ss_pred eEEeccccCccc
Q 008121 554 PHLSDCGLAALT 565 (577)
Q Consensus 554 ~kl~DFGla~~~ 565 (577)
+||+|||+++..
T Consensus 181 ~kL~Dfg~~~~~ 192 (327)
T 1fvr_A 181 AKIADFGLSRGQ 192 (327)
T ss_dssp EEECCTTCEESS
T ss_pred EEEcccCcCccc
Confidence 999999999854
No 195
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.92 E-value=1e-25 Score=230.05 Aligned_cols=156 Identities=26% Similarity=0.405 Sum_probs=134.7
Q ss_pred hcCCCccceeccCccceEEEEEEcC------CcEEEEEEccccccchHHHHHHHHHHHHhhcC-CCCceeeEeeEEEeCC
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHG 481 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~ 481 (577)
.++|...+.||+|+||.||+|.... .+.||+|.+.... .....+.+.+|+.+++++ +||||+++++++...+
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 4678888999999999999998643 2479999987543 344567799999999999 8999999999999999
Q ss_pred eEEEEEEecCCCCHHHhhhhccC----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC
Q 008121 482 QRLLVYEYVGNGNLHDMLHFADD----------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (577)
Q Consensus 482 ~~~lv~e~~~~g~L~~~l~~~~~----------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~ 551 (577)
..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+|||++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCC
Confidence 99999999999999999974321 134689999999999999999999999 99999999999999999
Q ss_pred CCeEEeccccCcccCCC
Q 008121 552 LNPHLSDCGLAALTPNT 568 (577)
Q Consensus 552 ~~~kl~DFGla~~~~~~ 568 (577)
+.+||+|||+++.....
T Consensus 201 ~~~kl~Dfg~~~~~~~~ 217 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMND 217 (333)
T ss_dssp GEEEBCCCGGGCCGGGC
T ss_pred CeEEECccccccccccc
Confidence 99999999999865443
No 196
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.92 E-value=7e-25 Score=224.57 Aligned_cols=150 Identities=30% Similarity=0.452 Sum_probs=131.8
Q ss_pred HHHhhcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhc--CCCCceeeEeeEEEeCC-
Q 008121 405 LQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR--LRHPNIVTLAGYCAEHG- 481 (577)
Q Consensus 405 ~~~~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~~- 481 (577)
.....++|...+.||+|+||.||+|.+ +++.||||++... ....+.+|.+++.. ++||||+++++++...+
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~ 110 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNG 110 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCS
T ss_pred cccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCC
Confidence 345567899999999999999999987 4899999998643 34567788888877 79999999999998776
Q ss_pred ---eEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCeeecCCCCCCeeeCC
Q 008121 482 ---QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH--------EVCLPSVVHRNFKSANILLDD 550 (577)
Q Consensus 482 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH--------~~~~~~ivHrDlk~~NILl~~ 550 (577)
..++||||+++|+|.++++. ..+++.+++.++.|++.||+||| +. +|+||||||+|||++.
T Consensus 111 ~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~ 182 (342)
T 1b6c_B 111 TWTQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKK 182 (342)
T ss_dssp SCCCEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECT
T ss_pred ccceeEEEEeecCCCcHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECC
Confidence 78999999999999999962 36899999999999999999999 66 9999999999999999
Q ss_pred CCCeEEeccccCcccCCC
Q 008121 551 ELNPHLSDCGLAALTPNT 568 (577)
Q Consensus 551 ~~~~kl~DFGla~~~~~~ 568 (577)
++.+||+|||+++.....
T Consensus 183 ~~~~kL~Dfg~~~~~~~~ 200 (342)
T 1b6c_B 183 NGTCCIADLGLAVRHDSA 200 (342)
T ss_dssp TSCEEECCCTTCEEEETT
T ss_pred CCCEEEEECCCceecccc
Confidence 999999999999876543
No 197
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.92 E-value=6e-25 Score=220.52 Aligned_cols=153 Identities=26% Similarity=0.386 Sum_probs=134.5
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEcccccc-------chHHHHHHHHHHHHhhcCC-CCceeeEeeEEEe
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-------SLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAE 479 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~ 479 (577)
.++|...+.||+|+||.||+|... +++.||||+++.... .....+.+.+|++++++++ ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 467888999999999999999875 589999999864321 1123467889999999996 9999999999999
Q ss_pred CCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEecc
Q 008121 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559 (577)
Q Consensus 480 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DF 559 (577)
.+..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred CCeEEEEEeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecc
Confidence 9999999999999999999973 35689999999999999999999999 9999999999999999999999999
Q ss_pred ccCcccCCC
Q 008121 560 GLAALTPNT 568 (577)
Q Consensus 560 Gla~~~~~~ 568 (577)
|+++.....
T Consensus 169 g~~~~~~~~ 177 (298)
T 1phk_A 169 GFSCQLDPG 177 (298)
T ss_dssp TTCEECCTT
T ss_pred cchhhcCCC
Confidence 999876543
No 198
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.92 E-value=3.4e-25 Score=225.17 Aligned_cols=152 Identities=23% Similarity=0.350 Sum_probs=127.9
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccc------hHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCC
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS------LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~ 481 (577)
.++|...+.||+|+||.||+|... +++.||||++...... ......+.+|++++++++||||+++++++...+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 457888999999999999999775 5889999998654221 122345889999999999999999999987654
Q ss_pred eEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC---eEEec
Q 008121 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN---PHLSD 558 (577)
Q Consensus 482 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~---~kl~D 558 (577)
.++||||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|
T Consensus 89 -~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp -EEEEEECCTTEETHHHHS----TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred -eEEEEecCCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 899999999999999986 346789999999999999999999999 9999999999999987654 99999
Q ss_pred cccCcccCCC
Q 008121 559 CGLAALTPNT 568 (577)
Q Consensus 559 FGla~~~~~~ 568 (577)
||+++.....
T Consensus 161 fg~~~~~~~~ 170 (322)
T 2ycf_A 161 FGHSKILGET 170 (322)
T ss_dssp CTTCEECCCC
T ss_pred Cccceecccc
Confidence 9999976544
No 199
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.92 E-value=4.6e-25 Score=224.67 Aligned_cols=153 Identities=25% Similarity=0.472 Sum_probs=133.1
Q ss_pred hcCCCccceeccCccceEEEEEE-----cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCC--
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF-----ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG-- 481 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~-- 481 (577)
.++|...+.||+|+||.||+|.+ .+++.||||++... .....+.|.+|++++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence 35677889999999999999984 35889999998754 3445678999999999999999999999987654
Q ss_pred eEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEecccc
Q 008121 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (577)
Q Consensus 482 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGl 561 (577)
..++||||+++|+|.+++.. ....+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 191 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHH---STTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred ceEEEEECCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcc
Confidence 67999999999999999963 235689999999999999999999999 999999999999999999999999999
Q ss_pred CcccCCCc
Q 008121 562 AALTPNTE 569 (577)
Q Consensus 562 a~~~~~~~ 569 (577)
++......
T Consensus 192 ~~~~~~~~ 199 (326)
T 2w1i_A 192 TKVLPQDK 199 (326)
T ss_dssp CEECCSSC
T ss_pred hhhccccc
Confidence 99875543
No 200
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.92 E-value=9.8e-26 Score=229.49 Aligned_cols=149 Identities=26% Similarity=0.386 Sum_probs=127.9
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 488 (577)
++|...+.||+|+||.||+|... +++.||||++.... .......+.+|++++++++||||+++++++...+..++|||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEH-EEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccc-ccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 46888899999999999999875 68999999986432 11222245679999999999999999999999999999999
Q ss_pred ecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccC
Q 008121 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (577)
Q Consensus 489 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~ 566 (577)
|++ |+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 81 ~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 151 (324)
T 3mtl_A 81 YLD-KDLKQYLDD---CGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKS 151 (324)
T ss_dssp CCS-EEHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-
T ss_pred ccc-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCccccccc
Confidence 997 599998863 345689999999999999999999999 99999999999999999999999999998654
No 201
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.92 E-value=5.4e-25 Score=228.36 Aligned_cols=150 Identities=21% Similarity=0.292 Sum_probs=127.3
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCC------
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG------ 481 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------ 481 (577)
.++|...+.||+|+||.||+|... +++.||||++..........+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 357888999999999999999764 5889999999755444556678899999999999999999999997654
Q ss_pred eEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEecccc
Q 008121 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (577)
Q Consensus 482 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGl 561 (577)
..|+||||++ |+|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp EEEEEEECCS-EEHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred ceEEEEEcCC-CCHHHHHh------hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 7899999997 57888885 3488999999999999999999999 999999999999999999999999999
Q ss_pred CcccCCC
Q 008121 562 AALTPNT 568 (577)
Q Consensus 562 a~~~~~~ 568 (577)
++.....
T Consensus 174 a~~~~~~ 180 (371)
T 2xrw_A 174 ARTAGTS 180 (371)
T ss_dssp -------
T ss_pred ccccccc
Confidence 9876543
No 202
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.92 E-value=2.4e-25 Score=230.54 Aligned_cols=150 Identities=21% Similarity=0.368 Sum_probs=118.0
Q ss_pred hcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeC------C
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH------G 481 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------~ 481 (577)
.++|...+.||+|+||.||+|.. .+|+.||||++..........+++.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 36788899999999999999976 5689999999976544455667889999999999999999999998654 5
Q ss_pred eEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEecccc
Q 008121 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (577)
Q Consensus 482 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGl 561 (577)
..|+|+||+ +++|.++++ ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 108 ~~~lv~e~~-~~~L~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---
T ss_pred eEEEEeccc-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 679999999 789999885 25699999999999999999999999 999999999999999999999999999
Q ss_pred CcccCC
Q 008121 562 AALTPN 567 (577)
Q Consensus 562 a~~~~~ 567 (577)
++....
T Consensus 179 a~~~~~ 184 (367)
T 2fst_X 179 ARHTAD 184 (367)
T ss_dssp ------
T ss_pred cccccc
Confidence 987543
No 203
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.92 E-value=7.3e-25 Score=219.81 Aligned_cols=149 Identities=19% Similarity=0.270 Sum_probs=131.0
Q ss_pred hcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcC-CCCceeeEeeEEEeCCeEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 486 (577)
.++|...+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|++++.++ +|+|++++++++......++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 84 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 84 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence 35688899999999999999986 568999999986432 234578899999999 799999999999999999999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC-----eEEecccc
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN-----PHLSDCGL 561 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~-----~kl~DFGl 561 (577)
|||+ +|+|.++++.. ...+++.++..|+.|++.||+|||+. +|+||||||+|||++.++. +||+|||+
T Consensus 85 ~e~~-~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~ 157 (298)
T 1csn_A 85 IDLL-GPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 157 (298)
T ss_dssp EECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred EEec-CCCHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence 9999 99999999732 34699999999999999999999999 9999999999999987776 99999999
Q ss_pred CcccCCC
Q 008121 562 AALTPNT 568 (577)
Q Consensus 562 a~~~~~~ 568 (577)
++.....
T Consensus 158 ~~~~~~~ 164 (298)
T 1csn_A 158 VKFYRDP 164 (298)
T ss_dssp CEESBCT
T ss_pred ccccccc
Confidence 9976554
No 204
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.92 E-value=4.1e-25 Score=223.13 Aligned_cols=150 Identities=30% Similarity=0.488 Sum_probs=123.4
Q ss_pred cCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEEe
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 489 (577)
++|...+.||+|+||.||+|.+. ++.||||++... ...+.|.+|++++++++||||+++++++.+ ..++||||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~ 80 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEY 80 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEEC
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEc
Confidence 46777899999999999999875 788999998643 345679999999999999999999998763 47899999
Q ss_pred cCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC-eEEeccccCcccCC
Q 008121 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN-PHLSDCGLAALTPN 567 (577)
Q Consensus 490 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~-~kl~DFGla~~~~~ 567 (577)
+++|+|.++++... ....+++..++.++.|+++||+|||+....+|+||||||+|||++.++. +||+|||+++....
T Consensus 81 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 81 AEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp CTTCBHHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred CCCCCHHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 99999999997321 2235788999999999999999999932228999999999999998886 79999999986543
No 205
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.92 E-value=1.7e-25 Score=227.65 Aligned_cols=156 Identities=27% Similarity=0.469 Sum_probs=133.3
Q ss_pred HHHHhhcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcC-CCCceeeEeeEEEe--
Q 008121 404 SLQTATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAE-- 479 (577)
Q Consensus 404 ~~~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~-- 479 (577)
++....++|...+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+.++.++ +||||+++++++..
T Consensus 18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 94 (326)
T 2x7f_A 18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN 94 (326)
T ss_dssp CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC
T ss_pred hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc---ccHHHHHHHHHHHHhccCCCCeeeeeeEEeecc
Confidence 3445567889999999999999999987 468999999986432 2346688999999998 79999999999976
Q ss_pred ----CCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeE
Q 008121 480 ----HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPH 555 (577)
Q Consensus 480 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~k 555 (577)
.+..++||||+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 95 PPGMDDQLWLVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp --CCCCEEEEEEECCTTEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEE
T ss_pred CccccceEEEEEEcCCCCcHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEE
Confidence 46789999999999999999743 235689999999999999999999999 999999999999999999999
Q ss_pred EeccccCcccCC
Q 008121 556 LSDCGLAALTPN 567 (577)
Q Consensus 556 l~DFGla~~~~~ 567 (577)
|+|||+++....
T Consensus 170 l~Dfg~~~~~~~ 181 (326)
T 2x7f_A 170 LVDFGVSAQLDR 181 (326)
T ss_dssp ECCCTTTC----
T ss_pred EeeCcCceecCc
Confidence 999999987643
No 206
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.92 E-value=2.6e-25 Score=223.60 Aligned_cols=155 Identities=25% Similarity=0.380 Sum_probs=120.9
Q ss_pred hhcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEE
Q 008121 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 408 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 486 (577)
..++|...+.||+|+||.||+|.. .+++.||||++..... ....+++.+|++++++++||||+++++++...+..++|
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 456788999999999999999976 4688999999865421 23456788999999999999999999999999999999
Q ss_pred EEecCCCCHHHhhhhcc----CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccC
Q 008121 487 YEYVGNGNLHDMLHFAD----DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~----~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla 562 (577)
|||+++|+|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 99999999999986421 1345689999999999999999999999 9999999999999999999999999999
Q ss_pred cccC
Q 008121 563 ALTP 566 (577)
Q Consensus 563 ~~~~ 566 (577)
+...
T Consensus 169 ~~~~ 172 (303)
T 2vwi_A 169 AFLA 172 (303)
T ss_dssp HHCC
T ss_pred heec
Confidence 8654
No 207
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.92 E-value=2.1e-24 Score=216.11 Aligned_cols=151 Identities=24% Similarity=0.316 Sum_probs=130.2
Q ss_pred CCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEEEe
Q 008121 411 SFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (577)
Q Consensus 411 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 489 (577)
+|.....||+|+||.||+|.. .+++.||||.+.... ....+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 100 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ 100 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC--C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc--hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence 455566899999999999986 458899999986542 34456789999999999999999999999999999999999
Q ss_pred cCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC-CCCeEEeccccCcccCC
Q 008121 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-ELNPHLSDCGLAALTPN 567 (577)
Q Consensus 490 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~-~~~~kl~DFGla~~~~~ 567 (577)
+++|+|.+++... .....+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++....
T Consensus 101 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~ 175 (295)
T 2clq_A 101 VPGGSLSALLRSK-WGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175 (295)
T ss_dssp CSEEEHHHHHHHT-TCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC
T ss_pred CCCCCHHHHHHhh-ccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCC
Confidence 9999999999742 1234567889999999999999999999 9999999999999987 89999999999987654
No 208
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.92 E-value=2e-25 Score=243.43 Aligned_cols=149 Identities=15% Similarity=0.143 Sum_probs=114.4
Q ss_pred eccCccceEEEE-EEcCCcEEEEEEcccccc--------chHHHHHHHHHHHHhhcC-CCCceeeEeeEEEeCCeEEEEE
Q 008121 418 IGEGSLGRVYRA-EFANGKIMAVKKIDNAAL--------SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 418 lg~G~fg~Vy~~-~~~~~~~vavK~~~~~~~--------~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 487 (577)
.+.|++|.+..+ +..-|+.+|||.+..... .....++|.+|+++|+++ .|+||+++++++.+++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 556666666655 334589999999864321 123356799999999999 6999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||++||+|.++|+ ...+++.. +|+.||+.||+|+|++ +||||||||+|||+++++.+||+|||+|+....
T Consensus 322 Eyv~G~~L~d~i~----~~~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 322 EKLPGRLLSDMLA----AGEEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp ECCCSEEHHHHHH----TTCCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred ecCCCCcHHHHHH----hCCCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 9999999999997 34556654 5899999999999999 999999999999999999999999999997754
Q ss_pred Ccc--ccccCC
Q 008121 568 TER--QVITGT 576 (577)
Q Consensus 568 ~~~--~~~~Gt 576 (577)
... ...+||
T Consensus 392 ~~~~~~t~vGT 402 (569)
T 4azs_A 392 DCSWPTNLVQS 402 (569)
T ss_dssp --CCSHHHHHH
T ss_pred CCccccCceec
Confidence 432 334455
No 209
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.92 E-value=6.1e-25 Score=223.79 Aligned_cols=153 Identities=25% Similarity=0.361 Sum_probs=130.1
Q ss_pred hcCCCccceeccCccceEEEEEE------cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCe
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF------ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 482 (577)
.++|...+.||+|+||.||+|.+ .+++.||||++.... ......++.+|+.++++++||||+++++++...+.
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc-chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 46788899999999999999974 347789999996432 34556789999999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC---CCCeEE
Q 008121 483 RLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---ELNPHL 556 (577)
Q Consensus 483 ~~lv~e~~~~g~L~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~---~~~~kl 556 (577)
.++||||+++|+|.+++..... ....+++.+++.++.|++.||.|||+. +|+||||||+|||++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEE
Confidence 9999999999999999975432 124589999999999999999999999 9999999999999984 456999
Q ss_pred eccccCccc
Q 008121 557 SDCGLAALT 565 (577)
Q Consensus 557 ~DFGla~~~ 565 (577)
+|||+++..
T Consensus 185 ~Dfg~~~~~ 193 (327)
T 2yfx_A 185 GDFGMARDI 193 (327)
T ss_dssp CCCHHHHHH
T ss_pred Ccccccccc
Confidence 999999854
No 210
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.92 E-value=8.2e-25 Score=217.76 Aligned_cols=152 Identities=27% Similarity=0.434 Sum_probs=130.2
Q ss_pred hcCCCccceeccCccceEEEEEEcC----CcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 484 (577)
.++|...+.||+|+||.||+|.+.+ +..||+|.+.... .....+.|.+|++++++++||||+++++++.+. ..+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~ 88 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTW 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCE
Confidence 4568888999999999999997643 3469999987543 344567899999999999999999999998654 568
Q ss_pred EEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcc
Q 008121 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (577)
Q Consensus 485 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~ 564 (577)
+||||+++|+|.++++. ....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 89 ~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 89 IIMELYPYGELGHYLER---NKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEEECCTTCBHHHHHHH---HTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEEecCCCCCHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 99999999999999963 235689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCC
Q 008121 565 TPNT 568 (577)
Q Consensus 565 ~~~~ 568 (577)
....
T Consensus 163 ~~~~ 166 (281)
T 3cc6_A 163 IEDE 166 (281)
T ss_dssp C---
T ss_pred cccc
Confidence 6543
No 211
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.92 E-value=7e-25 Score=224.04 Aligned_cols=148 Identities=29% Similarity=0.472 Sum_probs=121.8
Q ss_pred hcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHH--HHHHHhhcCCCCceeeEeeEEEe-----CC
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFL--EAVSNMSRLRHPNIVTLAGYCAE-----HG 481 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~--~e~~~l~~l~H~niv~l~~~~~~-----~~ 481 (577)
.++|...+.||+|+||.||+|+. +++.||||++... ....+. .|+..+..++||||+++++++.. ..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA-----NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc-----chhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 35788889999999999999976 6899999998643 223333 34444566899999999986542 23
Q ss_pred eEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC------CCCeeecCCCCCCeeeCCCCCeE
Q 008121 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC------LPSVVHRNFKSANILLDDELNPH 555 (577)
Q Consensus 482 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~------~~~ivHrDlk~~NILl~~~~~~k 555 (577)
..++||||+++|+|.++++. ...++..+.+|+.|+++||+|||+.+ .++|+||||||+|||++.++.+|
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 160 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSL-----HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEE
T ss_pred eEEEEEecCCCCcHHHHHhh-----cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEE
Confidence 57899999999999999962 34589999999999999999999873 33899999999999999999999
Q ss_pred EeccccCcccCC
Q 008121 556 LSDCGLAALTPN 567 (577)
Q Consensus 556 l~DFGla~~~~~ 567 (577)
|+|||+++....
T Consensus 161 L~DFG~a~~~~~ 172 (336)
T 3g2f_A 161 ISDFGLSMRLTG 172 (336)
T ss_dssp ECCCTTCEECSS
T ss_pred Eeeccceeeccc
Confidence 999999987653
No 212
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.92 E-value=1.9e-24 Score=217.60 Aligned_cols=152 Identities=27% Similarity=0.343 Sum_probs=129.5
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccc--hHHHHHHHHHHHHhhcCCCCceeeEeeEEE--eCCeE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS--LQEEDNFLEAVSNMSRLRHPNIVTLAGYCA--EHGQR 483 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~--~~~~~ 483 (577)
.++|...+.||+|+||.||++... +++.||+|+++..... ....+.+.+|++++++++||||+++++++. +.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 367899999999999999999874 5889999999754321 234577999999999999999999999984 44578
Q ss_pred EEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCc
Q 008121 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (577)
Q Consensus 484 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~ 563 (577)
++||||+++| |.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 84 ~lv~e~~~~~-l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSV--PEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEECCSEE-HHHHHHHS--TTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEehhccCC-HHHHHHhC--cccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccc
Confidence 9999999876 77777632 346789999999999999999999999 99999999999999999999999999998
Q ss_pred ccC
Q 008121 564 LTP 566 (577)
Q Consensus 564 ~~~ 566 (577)
...
T Consensus 158 ~~~ 160 (305)
T 2wtk_C 158 ALH 160 (305)
T ss_dssp ECC
T ss_pred ccC
Confidence 764
No 213
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.92 E-value=1.8e-24 Score=220.38 Aligned_cols=144 Identities=26% Similarity=0.403 Sum_probs=128.5
Q ss_pred cCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCC-CCceeeEeeEEEe--CCeEEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAE--HGQRLL 485 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~--~~~~~l 485 (577)
++|...+.||+|+||.||+|.. .+++.||||+++.. ..+.+.+|++++++++ ||||+++++++.. ....++
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l 110 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 110 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence 5788899999999999999976 56899999998643 2456889999999997 9999999999987 667899
Q ss_pred EEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC-CeEEeccccCcc
Q 008121 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL-NPHLSDCGLAAL 564 (577)
Q Consensus 486 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~-~~kl~DFGla~~ 564 (577)
||||+++++|.++++ .+++.++..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++.
T Consensus 111 v~e~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~ 180 (330)
T 3nsz_A 111 VFEHVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180 (330)
T ss_dssp EEECCCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeccCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceE
Confidence 999999999999884 378999999999999999999999 999999999999999776 899999999987
Q ss_pred cCCC
Q 008121 565 TPNT 568 (577)
Q Consensus 565 ~~~~ 568 (577)
....
T Consensus 181 ~~~~ 184 (330)
T 3nsz_A 181 YHPG 184 (330)
T ss_dssp CCTT
T ss_pred cCCC
Confidence 6543
No 214
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.91 E-value=8.2e-25 Score=244.84 Aligned_cols=155 Identities=24% Similarity=0.378 Sum_probs=131.8
Q ss_pred cCCCccceeccCccceEEEEEEc--CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCe-----
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA--NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ----- 482 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~----- 482 (577)
++|.+.+.||+|+||.||+|.+. +++.||||++.... .......|.+|++++++++||||+++++++...+.
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG-DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC-CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 67888999999999999999875 58999999986532 34456678999999999999999999999987665
Q ss_pred EEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccC
Q 008121 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (577)
Q Consensus 483 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla 562 (577)
.|+||||+++++|.+++. ..+++.+++.|+.||++||+|||+. +||||||||+|||++.+ .+||+|||++
T Consensus 159 ~~lv~E~~~g~~L~~~~~------~~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a 228 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKG------QKLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAV 228 (681)
T ss_dssp EEEEEECCCCEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred eEEEEEeCCCCcHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccc
Confidence 799999999999998774 2689999999999999999999999 99999999999999986 8999999999
Q ss_pred cccCCCccccccCCC
Q 008121 563 ALTPNTERQVITGTS 577 (577)
Q Consensus 563 ~~~~~~~~~~~~Gt~ 577 (577)
+..... ....||+
T Consensus 229 ~~~~~~--~~~~gt~ 241 (681)
T 2pzi_A 229 SRINSF--GYLYGTP 241 (681)
T ss_dssp EETTCC--SCCCCCT
T ss_pred hhcccC--CccCCCc
Confidence 976544 3444553
No 215
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.91 E-value=1.1e-24 Score=220.30 Aligned_cols=151 Identities=30% Similarity=0.516 Sum_probs=129.2
Q ss_pred hhcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEE
Q 008121 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 408 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 486 (577)
..++|...+.||+|+||.||+|... +|+.||+|.+.... ..+++.+|+.++.+++||||+++++++...+..++|
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 102 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV 102 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence 4567888999999999999999875 48999999986432 245688999999999999999999999999999999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccC
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~ 566 (577)
|||+++|+|.+++.. ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 103 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 103 MEYCGAGSVSDIIRL---RNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLT 176 (314)
T ss_dssp EECCTTEEHHHHHHH---HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECB
T ss_pred eecCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhh
Confidence 999999999999863 245689999999999999999999999 99999999999999999999999999998765
Q ss_pred CC
Q 008121 567 NT 568 (577)
Q Consensus 567 ~~ 568 (577)
..
T Consensus 177 ~~ 178 (314)
T 3com_A 177 DT 178 (314)
T ss_dssp TT
T ss_pred hh
Confidence 43
No 216
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.91 E-value=1.3e-24 Score=225.00 Aligned_cols=150 Identities=25% Similarity=0.367 Sum_probs=131.2
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeC-----Ce
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH-----GQ 482 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~ 482 (577)
.++|...+.||+|+||.||+|... +++.||||++.... .....+.+.+|++++.+++||||+++++++... ..
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc-CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 357888999999999999999764 68899999997432 344457789999999999999999999999755 36
Q ss_pred EEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccC
Q 008121 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (577)
Q Consensus 483 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla 562 (577)
.|+||||++ |+|.++++ ...+++.++..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 105 ~~iv~e~~~-~~L~~~l~-----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp EEEEEECCS-EEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEcccC-cCHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcce
Confidence 899999997 59999986 24589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCC
Q 008121 563 ALTPNT 568 (577)
Q Consensus 563 ~~~~~~ 568 (577)
+.....
T Consensus 176 ~~~~~~ 181 (364)
T 3qyz_A 176 RVADPD 181 (364)
T ss_dssp EECCGG
T ss_pred EecCCC
Confidence 976543
No 217
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.91 E-value=7e-25 Score=222.97 Aligned_cols=154 Identities=27% Similarity=0.415 Sum_probs=128.4
Q ss_pred hhcCCCccceeccCccceEEEEEE--cCCcEEEEEEccccccchHHHHHHHHHHHHhhcC---CCCceeeEeeEEE----
Q 008121 408 ATNSFSQEFLIGEGSLGRVYRAEF--ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL---RHPNIVTLAGYCA---- 478 (577)
Q Consensus 408 ~~~~~~~~~~lg~G~fg~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l---~H~niv~l~~~~~---- 478 (577)
..++|...+.||+|+||.||+|.. .+++.||+|+++...........+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 456888999999999999999987 4688999999865432222223456676666555 8999999999987
Q ss_pred -eCCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEe
Q 008121 479 -EHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLS 557 (577)
Q Consensus 479 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~ 557 (577)
.....++||||++ |+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHS--CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 4567899999997 6999999743 334589999999999999999999999 99999999999999999999999
Q ss_pred ccccCcccCC
Q 008121 558 DCGLAALTPN 567 (577)
Q Consensus 558 DFGla~~~~~ 567 (577)
|||+++....
T Consensus 163 Dfg~~~~~~~ 172 (326)
T 1blx_A 163 DFGLARIYSF 172 (326)
T ss_dssp SCCSCCCCCG
T ss_pred cCcccccccC
Confidence 9999987653
No 218
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.91 E-value=1e-24 Score=226.23 Aligned_cols=149 Identities=19% Similarity=0.333 Sum_probs=128.9
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeE----
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR---- 483 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~---- 483 (577)
.++|...+.||+|+||.||+|... +|+.||||++..........+++.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 457888999999999999999764 589999999976554555677899999999999999999999999876654
Q ss_pred --EEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEecccc
Q 008121 484 --LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (577)
Q Consensus 484 --~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGl 561 (577)
++||||++ |+|.+++. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 121 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG------MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEEcccc-ccHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999997 68888773 3489999999999999999999999 999999999999999999999999999
Q ss_pred CcccCC
Q 008121 562 AALTPN 567 (577)
Q Consensus 562 a~~~~~ 567 (577)
++....
T Consensus 191 a~~~~~ 196 (371)
T 4exu_A 191 ARHADA 196 (371)
T ss_dssp C-----
T ss_pred cccccc
Confidence 986543
No 219
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.91 E-value=1.2e-24 Score=217.41 Aligned_cols=152 Identities=25% Similarity=0.413 Sum_probs=134.8
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
.++|...+.||+|+||.||+|... +++.||+|++..........+.+.+|++++++++||||+++++++...+..++||
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 100 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence 457888999999999999999875 6899999998765444445677999999999999999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC---CCeEEeccccCcc
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE---LNPHLSDCGLAAL 564 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~---~~~kl~DFGla~~ 564 (577)
||+++++|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.+ +.+||+|||+++.
T Consensus 101 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~ 173 (287)
T 2wei_A 101 ELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (287)
T ss_dssp CCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGT
T ss_pred EccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCccee
Confidence 99999999998863 34689999999999999999999999 99999999999999754 4799999999987
Q ss_pred cCC
Q 008121 565 TPN 567 (577)
Q Consensus 565 ~~~ 567 (577)
...
T Consensus 174 ~~~ 176 (287)
T 2wei_A 174 FQQ 176 (287)
T ss_dssp BCC
T ss_pred ecC
Confidence 644
No 220
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.91 E-value=7.8e-25 Score=220.13 Aligned_cols=149 Identities=25% Similarity=0.431 Sum_probs=130.5
Q ss_pred hhcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEE
Q 008121 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 408 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 486 (577)
..++|...+.||+|+||.||+|... +++.||+|++.... ....+++.+|++++++++||||+++++++...+..++|
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC--HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 3467888999999999999999885 48899999986542 33456789999999999999999999999999999999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcc
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~ 564 (577)
|||+++|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 95 ~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 166 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLEL---DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAK 166 (302)
T ss_dssp EECCTTEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHH
T ss_pred EEeCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcc
Confidence 9999999999988632 35689999999999999999999999 999999999999999999999999998753
No 221
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.91 E-value=6.8e-25 Score=223.58 Aligned_cols=152 Identities=23% Similarity=0.435 Sum_probs=125.9
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCc----EEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 483 (577)
.++|...+.||+|+||.||+|.+. +++ +||+|.+.... .....+++.+|+.++++++||||+++++++.... .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~ 91 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS-SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-E
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-c
Confidence 356888999999999999999864 344 35777775432 2345677999999999999999999999998764 7
Q ss_pred EEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCc
Q 008121 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (577)
Q Consensus 484 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~ 563 (577)
++|+||+++|+|.+++.. ....+++..++.|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 92 ~~v~~~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 92 QLITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEECCCSSCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred eEEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 899999999999999963 245689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCC
Q 008121 564 LTPNT 568 (577)
Q Consensus 564 ~~~~~ 568 (577)
.....
T Consensus 166 ~~~~~ 170 (327)
T 3lzb_A 166 LLGAE 170 (327)
T ss_dssp -----
T ss_pred EccCc
Confidence 76443
No 222
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.91 E-value=1.1e-24 Score=207.02 Aligned_cols=175 Identities=21% Similarity=0.253 Sum_probs=152.6
Q ss_pred CCCCCCCccEEeeC-----------CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEE
Q 008121 69 DPCGESWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLN 135 (577)
Q Consensus 69 ~~c~~~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ 135 (577)
+.|.|.|.+|.|+. .+++.|+|++|++++..+..|+.+++|++|+|++|+|++..+..+. ++|++|+
T Consensus 3 ~~C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 82 (208)
T 2o6s_A 3 SRCSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLN 82 (208)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEE
Confidence 56778999999975 2588999999999988777899999999999999999965444443 8999999
Q ss_pred ccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCccccc
Q 008121 136 LASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTG 215 (577)
Q Consensus 136 l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 215 (577)
|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|.+.+
T Consensus 83 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 162 (208)
T 2o6s_A 83 LSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 162 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC
T ss_pred CCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec
Confidence 99999998877888999999999999999998888889999999999999999997666678999999999999998876
Q ss_pred ccccCCCCCccEEEeecCccccccCcccccccc
Q 008121 216 SLNVFSGLPLTTLNVANNHFSGWIPRELISIRT 248 (577)
Q Consensus 216 ~~~~~~~~~L~~L~l~~N~l~g~~p~~l~~l~~ 248 (577)
..+ .|+.|+++.|+++|.+|++++++..
T Consensus 163 ~~~-----~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 TCP-----GIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CTT-----TTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred CCC-----CHHHHHHHHHhCCceeeccCccccC
Confidence 432 3788999999999999998876643
No 223
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.91 E-value=9.1e-25 Score=224.34 Aligned_cols=150 Identities=22% Similarity=0.237 Sum_probs=122.4
Q ss_pred hcCCCccceeccCccceEEEEEEc----CCcEEEEEEccccccchH---------HHHHHHHHHHHhhcCCCCceeeEee
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQ---------EEDNFLEAVSNMSRLRHPNIVTLAG 475 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~---------~~~~~~~e~~~l~~l~H~niv~l~~ 475 (577)
.++|...+.||+|+||.||+|... ++..||||++........ ....+.+|+..+..++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 356888899999999999999875 578899999865421111 1234677889999999999999999
Q ss_pred EEEe----CCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC
Q 008121 476 YCAE----HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (577)
Q Consensus 476 ~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~ 551 (577)
++.. ....|+||||+ +|+|.+++.. ...+++.++..|+.|++.||+|||+. +|+||||||+|||++.+
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQ----NGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYK 187 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBG----GGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccC
Confidence 9987 67899999999 9999999963 23799999999999999999999999 99999999999999987
Q ss_pred C--CeEEeccccCcccC
Q 008121 552 L--NPHLSDCGLAALTP 566 (577)
Q Consensus 552 ~--~~kl~DFGla~~~~ 566 (577)
+ .+||+|||+++.+.
T Consensus 188 ~~~~~kL~Dfg~a~~~~ 204 (345)
T 2v62_A 188 NPDQVYLADYGLSYRYC 204 (345)
T ss_dssp STTSEEECCCTTCEESS
T ss_pred CCCcEEEEeCCCceecc
Confidence 7 99999999998764
No 224
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.91 E-value=1e-24 Score=230.00 Aligned_cols=157 Identities=26% Similarity=0.346 Sum_probs=126.9
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeC----C--e
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH----G--Q 482 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~----~--~ 482 (577)
.+|...+.||+|+||.||+|.+. +++.||||++.... ..+.+|++++++++|||||++++++... + .
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~ 127 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence 35778899999999999999885 58999999985432 1234699999999999999999998542 1 3
Q ss_pred EEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC-CCeEEecccc
Q 008121 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE-LNPHLSDCGL 561 (577)
Q Consensus 483 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~-~~~kl~DFGl 561 (577)
.++||||+++ +|.+.++........+++..+..++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|||+
T Consensus 128 ~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 128 LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchh
Confidence 6799999975 77777654334567799999999999999999999999 99999999999999965 6789999999
Q ss_pred CcccCCCcc-ccccCC
Q 008121 562 AALTPNTER-QVITGT 576 (577)
Q Consensus 562 a~~~~~~~~-~~~~Gt 576 (577)
|+....... ....||
T Consensus 204 a~~~~~~~~~~~~~~t 219 (420)
T 1j1b_A 204 AKQLVRGEPNVSYICS 219 (420)
T ss_dssp CEECCTTCCCCSCCSC
T ss_pred hhhcccCCCceeeeeC
Confidence 997644332 234455
No 225
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.91 E-value=4.9e-25 Score=219.01 Aligned_cols=149 Identities=32% Similarity=0.501 Sum_probs=125.0
Q ss_pred hcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeC-CeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH-GQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-~~~~lv~ 487 (577)
.++|...+.||+|+||.||+++.. ++.||||+++... ..+.|.+|++++++++||||+++++++... +..++||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 456888899999999999999875 8899999987532 456789999999999999999999997654 4789999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
||+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 95 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 95 EYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169 (278)
T ss_dssp CCCTTEEHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred ecCCCCCHHHHHHhc--ccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence 999999999999632 123478999999999999999999999 999999999999999999999999999986543
No 226
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.91 E-value=9e-25 Score=247.99 Aligned_cols=109 Identities=28% Similarity=0.413 Sum_probs=65.0
Q ss_pred CCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccc-cCCCCC-ccEEE
Q 008121 152 MVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSGLP-LTTLN 229 (577)
Q Consensus 152 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~L~ 229 (577)
+++|+.|||++|+|+|.+|..|+++++|+.|+|++|+|+|.+|..|+++++|++|+|++|+|+|.+| .+..++ |+.||
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 3455566666666666666666666666666666666666666666666666666666666666554 244443 66666
Q ss_pred eecCccccccCc--ccccccceeecCCcCCCCC
Q 008121 230 VANNHFSGWIPR--ELISIRTFIYDGNSFDNGP 260 (577)
Q Consensus 230 l~~N~l~g~~p~--~l~~l~~l~~~~n~~~~~~ 260 (577)
+++|+|+|.||. .+.++....+.||+..||+
T Consensus 711 ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 711 LSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp CCSSEEEEECCSSSSGGGSCGGGGCSCTEEEST
T ss_pred CcCCcccccCCCchhhccCCHHHhcCCchhcCC
Confidence 666666666664 2444555556666655554
No 227
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.91 E-value=2.3e-24 Score=218.29 Aligned_cols=147 Identities=27% Similarity=0.385 Sum_probs=123.5
Q ss_pred hcCCCccceeccCccceEEEEEEcC-CcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEE---------
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCA--------- 478 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~--------- 478 (577)
.++|...+.||+|+||.||+|.... ++.||+|++... .....+++.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 87 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD 87 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC-
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccc
Confidence 3578889999999999999998764 899999998643 3455678999999999999999999999873
Q ss_pred -----eCCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC-CCC
Q 008121 479 -----EHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD-DEL 552 (577)
Q Consensus 479 -----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~-~~~ 552 (577)
..+..++||||++ |+|.++++ ...+++..+..++.|+++||+|||+. +|+||||||+||+++ +++
T Consensus 88 ~~~~~~~~~~~lv~e~~~-~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 158 (320)
T 2i6l_A 88 VGSLTELNSVYIVQEYME-TDLANVLE-----QGPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDL 158 (320)
T ss_dssp ---CCSCSEEEEEEECCS-EEHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTT
T ss_pred cccccccCceeEEeeccC-CCHHHHhh-----cCCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCC
Confidence 3467899999997 69999985 35689999999999999999999999 999999999999997 567
Q ss_pred CeEEeccccCcccC
Q 008121 553 NPHLSDCGLAALTP 566 (577)
Q Consensus 553 ~~kl~DFGla~~~~ 566 (577)
.+||+|||+++...
T Consensus 159 ~~kl~Dfg~~~~~~ 172 (320)
T 2i6l_A 159 VLKIGDFGLARIMD 172 (320)
T ss_dssp EEEECCCTTCBCC-
T ss_pred eEEEccCccccccC
Confidence 99999999999764
No 228
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.91 E-value=1.9e-24 Score=222.43 Aligned_cols=149 Identities=26% Similarity=0.409 Sum_probs=130.7
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeC-----Ce
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH-----GQ 482 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~ 482 (577)
.++|...+.||+|+||.||+|... +|+.||||++.... ......++.+|++++++++||||+++++++... ..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD-KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc-cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 457888999999999999999875 68999999996432 344566788999999999999999999998654 67
Q ss_pred EEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccC
Q 008121 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (577)
Q Consensus 483 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla 562 (577)
.++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 89 ~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLA 159 (353)
T ss_dssp EEEEECCCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeccC-ccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccc
Confidence 899999997 699999862 4689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCC
Q 008121 563 ALTPN 567 (577)
Q Consensus 563 ~~~~~ 567 (577)
+....
T Consensus 160 ~~~~~ 164 (353)
T 2b9h_A 160 RIIDE 164 (353)
T ss_dssp EECC-
T ss_pred ccccc
Confidence 97653
No 229
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.91 E-value=1.5e-24 Score=221.23 Aligned_cols=152 Identities=25% Similarity=0.415 Sum_probs=130.6
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCC-CCceeeEeeEEE--------
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCA-------- 478 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~-------- 478 (577)
..+|...+.||+|+||.||+|.+. +++.||||++... .....+.+.+|+.++.++. ||||+++++++.
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 104 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT 104 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence 457888999999999999999874 6899999998543 3445667899999999996 999999999984
Q ss_pred eCCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeeCCCCCeEE
Q 008121 479 EHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS--VVHRNFKSANILLDDELNPHL 556 (577)
Q Consensus 479 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~--ivHrDlk~~NILl~~~~~~kl 556 (577)
.....++||||++ |+|.++++... ....+++.++..|+.|++.||+|||+. + |+||||||+|||++.++.+||
T Consensus 105 ~~~~~~lv~e~~~-g~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl 179 (337)
T 3ll6_A 105 GQAEFLLLTELCK-GQLVEFLKKME-SRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKL 179 (337)
T ss_dssp SSEEEEEEEECCS-EEHHHHHHHHH-TTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEB
T ss_pred CCceEEEEEEecC-CCHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEE
Confidence 3345799999995 79999986432 245699999999999999999999998 7 999999999999999999999
Q ss_pred eccccCcccCC
Q 008121 557 SDCGLAALTPN 567 (577)
Q Consensus 557 ~DFGla~~~~~ 567 (577)
+|||+++....
T Consensus 180 ~Dfg~~~~~~~ 190 (337)
T 3ll6_A 180 CDFGSATTISH 190 (337)
T ss_dssp CCCTTCBCCSS
T ss_pred ecCccceeccc
Confidence 99999987654
No 230
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.91 E-value=3.2e-25 Score=224.21 Aligned_cols=163 Identities=22% Similarity=0.271 Sum_probs=130.4
Q ss_pred HhhcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccch----HHHHHHHHHHHHhhcC----CCCceeeEeeEE
Q 008121 407 TATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSL----QEEDNFLEAVSNMSRL----RHPNIVTLAGYC 477 (577)
Q Consensus 407 ~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l----~H~niv~l~~~~ 477 (577)
...++|...+.||+|+||.||+|.. .+++.||||+++...... .....+.+|+.++.++ +||||+++++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 4457899999999999999999976 468899999996543211 1233456788888888 899999999999
Q ss_pred EeCCeEEEEEEe-cCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC-CCCCeE
Q 008121 478 AEHGQRLLVYEY-VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD-DELNPH 555 (577)
Q Consensus 478 ~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~-~~~~~k 555 (577)
...+..++|||| +++++|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++ +++.+|
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITE----KGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEE
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEE
Confidence 998999999999 789999999973 34689999999999999999999999 999999999999999 889999
Q ss_pred EeccccCcccCCCccccccCC
Q 008121 556 LSDCGLAALTPNTERQVITGT 576 (577)
Q Consensus 556 l~DFGla~~~~~~~~~~~~Gt 576 (577)
|+|||+++...........||
T Consensus 181 l~dfg~~~~~~~~~~~~~~~~ 201 (312)
T 2iwi_A 181 LIDFGSGALLHDEPYTDFDGT 201 (312)
T ss_dssp ECCCSSCEECCSSCBCCCCSC
T ss_pred EEEcchhhhcccCcccccCCc
Confidence 999999998776655555565
No 231
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.91 E-value=1.5e-24 Score=223.33 Aligned_cols=148 Identities=20% Similarity=0.331 Sum_probs=129.0
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCe------
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ------ 482 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~------ 482 (577)
++|...+.||+|+||.||+|... +|+.||||++..........+++.+|+.++++++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 56888899999999999999874 68999999997654445556788999999999999999999999987653
Q ss_pred EEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccC
Q 008121 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (577)
Q Consensus 483 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla 562 (577)
.++||||++ |+|.+++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 173 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMG------LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA 173 (353)
T ss_dssp CEEEEECCS-EEGGGTTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred EEEEecccc-CCHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccc
Confidence 499999997 68888773 3489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCC
Q 008121 563 ALTPN 567 (577)
Q Consensus 563 ~~~~~ 567 (577)
+....
T Consensus 174 ~~~~~ 178 (353)
T 3coi_A 174 RHADA 178 (353)
T ss_dssp TC---
T ss_pred cCCCC
Confidence 87543
No 232
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=9.3e-24 Score=209.11 Aligned_cols=175 Identities=23% Similarity=0.309 Sum_probs=126.1
Q ss_pred cEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCC-C--CCccEEEccCCcCCCcCCCCccCCCCccEEEe
Q 008121 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQL-P--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (577)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 160 (577)
.++.|+|++|++++..+..|.++++|++|+|++|+|+. +|... . ++|++|+|++|++++..+..|..+++|++|+|
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT-LPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSC-CCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCe-eChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 46777777787777666677788888888888888774 44332 2 67888888888887766667777888888888
Q ss_pred ccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCccccccccc-CCCCC-ccEEEeecCccccc
Q 008121 161 SRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSGLP-LTTLNVANNHFSGW 238 (577)
Q Consensus 161 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~L~l~~N~l~g~ 238 (577)
++|++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++.++. +..++ |+.|+|++|+|++.
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 196 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRV 196 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcC
Confidence 88888877777777788888888888888765555577778888888888887776553 54444 78888888888754
Q ss_pred cCccc---ccccceeecCCcCCCC
Q 008121 239 IPREL---ISIRTFIYDGNSFDNG 259 (577)
Q Consensus 239 ~p~~l---~~l~~l~~~~n~~~~~ 259 (577)
.+..+ .+++.+++.+|++.|.
T Consensus 197 ~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 197 PEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCS
T ss_pred CHHHhccccCCCEEEecCCCeeCC
Confidence 44333 3556677777777653
No 233
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.91 E-value=5.2e-25 Score=222.82 Aligned_cols=154 Identities=23% Similarity=0.284 Sum_probs=134.2
Q ss_pred HHhhcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCC--CCceeeEeeEEEeCCeE
Q 008121 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR--HPNIVTLAGYCAEHGQR 483 (577)
Q Consensus 406 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~~~~ 483 (577)
....++|...+.||+|+||.||++...+++.||||++..........+.+.+|++++.+++ ||||+++++++...+..
T Consensus 24 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~ 103 (313)
T 3cek_A 24 SVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 103 (313)
T ss_dssp EETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEE
T ss_pred eeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEE
Confidence 3445678889999999999999999888999999999765545566788999999999997 59999999999999999
Q ss_pred EEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCc
Q 008121 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (577)
Q Consensus 484 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~ 563 (577)
++||| +.+|+|.+++.. ...+++.++..++.|+++||+|||+. +|+||||||+|||+++ +.+||+|||+++
T Consensus 104 ~lv~e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~ 174 (313)
T 3cek_A 104 YMVME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIAN 174 (313)
T ss_dssp EEEEC-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSC
T ss_pred EEEEe-cCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccc
Confidence 99999 568899999973 35789999999999999999999999 9999999999999975 899999999998
Q ss_pred ccCCC
Q 008121 564 LTPNT 568 (577)
Q Consensus 564 ~~~~~ 568 (577)
.....
T Consensus 175 ~~~~~ 179 (313)
T 3cek_A 175 QMQPD 179 (313)
T ss_dssp C----
T ss_pred cccCc
Confidence 76543
No 234
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.91 E-value=3.9e-24 Score=226.18 Aligned_cols=158 Identities=18% Similarity=0.240 Sum_probs=132.1
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcC------CCCceeeEeeEEEeCC
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL------RHPNIVTLAGYCAEHG 481 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l------~H~niv~l~~~~~~~~ 481 (577)
..+|...+.||+|+||.||+|... +++.||||+++.. .....++.+|++++..+ +|+||+++++++...+
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 172 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN 172 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence 356888999999999999999765 5899999999653 33445677777777766 6779999999999999
Q ss_pred eEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC--eEEecc
Q 008121 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN--PHLSDC 559 (577)
Q Consensus 482 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~--~kl~DF 559 (577)
..++||||++ |+|.+++... ....+++..+..|+.||+.||+|||+. +|+||||||+|||++.++. +||+||
T Consensus 173 ~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DF 246 (429)
T 3kvw_A 173 HICMTFELLS-MNLYELIKKN--KFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDF 246 (429)
T ss_dssp EEEEEECCCC-CBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCC
T ss_pred eEEEEEeccC-CCHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeec
Confidence 9999999996 6999998742 334589999999999999999999999 9999999999999999887 999999
Q ss_pred ccCcccCCCccccccCC
Q 008121 560 GLAALTPNTERQVITGT 576 (577)
Q Consensus 560 Gla~~~~~~~~~~~~Gt 576 (577)
|+|+..... ....+||
T Consensus 247 G~a~~~~~~-~~~~~gt 262 (429)
T 3kvw_A 247 GSSCYEHQR-VYTYIQS 262 (429)
T ss_dssp TTCEETTCC-CCSSCSC
T ss_pred ccceecCCc-ccccCCC
Confidence 999865432 3334555
No 235
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.91 E-value=1.3e-24 Score=227.22 Aligned_cols=150 Identities=25% Similarity=0.348 Sum_probs=124.0
Q ss_pred cCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCC------eE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG------QR 483 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------~~ 483 (577)
.+|...+.||+|+||.||+|....+..||+|++..... ...+|+++++.++||||+++++++...+ ..
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 113 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence 46888899999999999999998777799998854321 1236899999999999999999986543 37
Q ss_pred EEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC-CCCCeEEeccccC
Q 008121 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD-DELNPHLSDCGLA 562 (577)
Q Consensus 484 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~-~~~~~kl~DFGla 562 (577)
++||||++++ +.+.+.........+++..+..++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+|
T Consensus 114 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a 189 (394)
T 4e7w_A 114 NLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSA 189 (394)
T ss_dssp EEEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence 8999999864 4444433223456799999999999999999999999 999999999999999 7999999999999
Q ss_pred cccCCCc
Q 008121 563 ALTPNTE 569 (577)
Q Consensus 563 ~~~~~~~ 569 (577)
+......
T Consensus 190 ~~~~~~~ 196 (394)
T 4e7w_A 190 KILIAGE 196 (394)
T ss_dssp EECCTTC
T ss_pred ccccCCC
Confidence 9764433
No 236
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.91 E-value=1e-24 Score=226.34 Aligned_cols=151 Identities=15% Similarity=0.083 Sum_probs=113.2
Q ss_pred cCCCccceeccCccceEEEEEEc-CCcEEEEEEcccccc-chHHHHHHHHHH---HHhhcCCCCceeeEe-------eEE
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAV---SNMSRLRHPNIVTLA-------GYC 477 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~---~~l~~l~H~niv~l~-------~~~ 477 (577)
..|...+.||+|+||.||+|.+. +++.||||++..... .....+.+.+|+ ..++. +||||++++ +++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence 45778899999999999999875 689999999976543 234456677784 45555 799988754 444
Q ss_pred EeC-----------------CeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHH------HHHHHHHHHHHHHHhcCCCC
Q 008121 478 AEH-----------------GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNAR------VRVALGTARALEYLHEVCLP 534 (577)
Q Consensus 478 ~~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~------~~i~~~i~~~L~yLH~~~~~ 534 (577)
... ...|+||||++ |+|.++++.. ...+++..+ ..++.|+++||+|||+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~--- 213 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL---DFVYVFRGDEGILALHILTAQLIRLAANLQSK--- 213 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH---HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh---ccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---
Confidence 332 33799999998 8999999743 223455555 78889999999999999
Q ss_pred CeeecCCCCCCeeeCCCCCeEEeccccCcccCCC
Q 008121 535 SVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (577)
Q Consensus 535 ~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~~~ 568 (577)
+|+||||||+|||++.++.+||+|||+|+.....
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~ 247 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR 247 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTCE
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCCC
Confidence 9999999999999999999999999999976543
No 237
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.91 E-value=4.8e-25 Score=227.04 Aligned_cols=145 Identities=22% Similarity=0.276 Sum_probs=126.1
Q ss_pred cCCCccceeccCccceEEEEEEcC---------CcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceee--------
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFAN---------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT-------- 472 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~-------- 472 (577)
++|...+.||+|+||.||+|.... ++.||||++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~~ 114 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYST 114 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhccC
Confidence 578889999999999999998763 789999998643 35788999999999999987
Q ss_pred -------EeeEEEe-CCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCC
Q 008121 473 -------LAGYCAE-HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSA 544 (577)
Q Consensus 473 -------l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~ 544 (577)
+++++.. .+..++||||+ +|+|.+++... ....+++.++..|+.|++.||+|||+. +|+||||||+
T Consensus 115 ~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~ 188 (352)
T 2jii_A 115 PLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS--PKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAE 188 (352)
T ss_dssp TTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGG
T ss_pred CccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHH
Confidence 6777776 67889999999 99999999732 236799999999999999999999999 9999999999
Q ss_pred CeeeCCCC--CeEEeccccCcccCC
Q 008121 545 NILLDDEL--NPHLSDCGLAALTPN 567 (577)
Q Consensus 545 NILl~~~~--~~kl~DFGla~~~~~ 567 (577)
|||++.++ .+||+|||+++....
T Consensus 189 NIl~~~~~~~~~kl~Dfg~a~~~~~ 213 (352)
T 2jii_A 189 NIFVDPEDQSQVTLAGYGFAFRYCP 213 (352)
T ss_dssp GEEEETTEEEEEEECCGGGCBCSSG
T ss_pred HEEEcCCCCceEEEecCcceeeccC
Confidence 99999998 999999999987654
No 238
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.91 E-value=7.6e-25 Score=222.51 Aligned_cols=163 Identities=21% Similarity=0.290 Sum_probs=138.2
Q ss_pred HhhcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccch----HHHHHHHHHHHHhhcCC--CCceeeEeeEEEe
Q 008121 407 TATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSL----QEEDNFLEAVSNMSRLR--HPNIVTLAGYCAE 479 (577)
Q Consensus 407 ~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~ 479 (577)
...++|...+.||+|+||.||+|.. .+++.||||++....... ...+.+.+|++++++++ ||||+++++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 3456788899999999999999976 568999999986543221 12345678899999996 5999999999999
Q ss_pred CCeEEEEEEecCC-CCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC-CCCCeEEe
Q 008121 480 HGQRLLVYEYVGN-GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD-DELNPHLS 557 (577)
Q Consensus 480 ~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~-~~~~~kl~ 557 (577)
.+..++||||+.+ ++|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+|||++ +++.+||+
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~ 192 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLI 192 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEEC
T ss_pred CCcEEEEEEcCCCCccHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEe
Confidence 9999999999976 899999963 35689999999999999999999999 999999999999999 78999999
Q ss_pred ccccCcccCCCccccccCC
Q 008121 558 DCGLAALTPNTERQVITGT 576 (577)
Q Consensus 558 DFGla~~~~~~~~~~~~Gt 576 (577)
|||+++...........||
T Consensus 193 Dfg~~~~~~~~~~~~~~gt 211 (320)
T 3a99_A 193 DFGSGALLKDTVYTDFDGT 211 (320)
T ss_dssp CCTTCEECCSSCBCCCCSC
T ss_pred eCccccccccccccCCCCC
Confidence 9999998776655555565
No 239
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.91 E-value=3.3e-24 Score=215.52 Aligned_cols=147 Identities=20% Similarity=0.319 Sum_probs=125.7
Q ss_pred cCCCcc-ceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHh-hcCCCCceeeEeeEEEe----CCe
Q 008121 410 NSFSQE-FLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNM-SRLRHPNIVTLAGYCAE----HGQ 482 (577)
Q Consensus 410 ~~~~~~-~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l-~~l~H~niv~l~~~~~~----~~~ 482 (577)
++|... +.||+|+||.||++.. .+++.||+|+++.. ..+.+|++++ +..+||||+++++++.. ...
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 89 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 89 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence 345554 7799999999999977 56899999998532 2466788877 66699999999999876 667
Q ss_pred EEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC---CCCeEEecc
Q 008121 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---ELNPHLSDC 559 (577)
Q Consensus 483 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~---~~~~kl~DF 559 (577)
.++||||+++|+|.+++... ....+++..+..|+.|++.||+|||+. +|+||||||+|||++. ++.+||+||
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Df 164 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 164 (299)
T ss_dssp EEEEECCCCSCBHHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred EEEEEeecCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecc
Confidence 89999999999999999742 345799999999999999999999999 9999999999999998 789999999
Q ss_pred ccCcccCCC
Q 008121 560 GLAALTPNT 568 (577)
Q Consensus 560 Gla~~~~~~ 568 (577)
|+++.....
T Consensus 165 g~a~~~~~~ 173 (299)
T 3m2w_A 165 GFAKETTGE 173 (299)
T ss_dssp TTCEECTTC
T ss_pred ccccccccc
Confidence 999876543
No 240
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.91 E-value=2.4e-24 Score=222.24 Aligned_cols=166 Identities=25% Similarity=0.331 Sum_probs=124.0
Q ss_pred HHHHhhcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCe
Q 008121 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (577)
Q Consensus 404 ~~~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 482 (577)
......++|...+.||+|+||.||+|... +++.||||++.... .....+.+|++.++.++||||+++++++...+.
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP---RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT---TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc---cccHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 34566788999999999999999999874 58999999885432 223346778888899999999999999976443
Q ss_pred -------EEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCCeeecCCCCCCeeeCC-CC
Q 008121 483 -------RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH--EVCLPSVVHRNFKSANILLDD-EL 552 (577)
Q Consensus 483 -------~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH--~~~~~~ivHrDlk~~NILl~~-~~ 552 (577)
.++||||+++ +|.+.+.........+++..+..++.|++.||.||| +. +|+||||||+|||++. ++
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~ 169 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADG 169 (360)
T ss_dssp SCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTT
T ss_pred ccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCC
Confidence 7899999976 666555433345667899999999999999999999 77 9999999999999996 89
Q ss_pred CeEEeccccCcccCCCccc-cccCC
Q 008121 553 NPHLSDCGLAALTPNTERQ-VITGT 576 (577)
Q Consensus 553 ~~kl~DFGla~~~~~~~~~-~~~Gt 576 (577)
.+||+|||+++........ ...||
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~gt 194 (360)
T 3e3p_A 170 TLKLCDFGSAKKLSPSEPNVAYICS 194 (360)
T ss_dssp EEEECCCTTCBCCCTTSCCCSTTSC
T ss_pred cEEEeeCCCceecCCCCCcccccCC
Confidence 9999999999977554432 33454
No 241
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.91 E-value=3.1e-25 Score=224.92 Aligned_cols=150 Identities=22% Similarity=0.371 Sum_probs=128.8
Q ss_pred HhhcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEE
Q 008121 407 TATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 407 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 486 (577)
...++|...+.||+|+||.||+|.+.+ .||+|+++.........+.|.+|+.++++++||||+++++++...+..++|
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 345678889999999999999998754 599999875443333445678899999999999999999999999999999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCccc
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~ 565 (577)
|||+++|+|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+||+++ ++.+||+|||+++..
T Consensus 108 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~ 179 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRD---AKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSIS 179 (319)
T ss_dssp CBCCCSEEHHHHTTS---SCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred eecccCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence 999999999999962 345789999999999999999999999 999999999999998 679999999998764
No 242
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.91 E-value=1.9e-24 Score=226.94 Aligned_cols=145 Identities=24% Similarity=0.440 Sum_probs=114.7
Q ss_pred cceeccCccceEEEEEEc---CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEe--CCeEEEEEEe
Q 008121 415 EFLIGEGSLGRVYRAEFA---NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE--HGQRLLVYEY 489 (577)
Q Consensus 415 ~~~lg~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~~~lv~e~ 489 (577)
.++||+|+||.||+|.+. +++.||||++..... ...+.+|++++++++||||+++++++.. ....++||||
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~ 101 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 101 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEEC
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeC
Confidence 458999999999999875 478999999975432 2357899999999999999999999954 6689999999
Q ss_pred cCCCCHHHhhhhcc-----CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----CCCCCeEEeccc
Q 008121 490 VGNGNLHDMLHFAD-----DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL----DDELNPHLSDCG 560 (577)
Q Consensus 490 ~~~g~L~~~l~~~~-----~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl----~~~~~~kl~DFG 560 (577)
++ |+|.+++.... .....+++..+..|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||
T Consensus 102 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 177 (405)
T 3rgf_A 102 AE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMG 177 (405)
T ss_dssp CS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCTT
T ss_pred CC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEECC
Confidence 96 58888876322 1233589999999999999999999999 99999999999999 778999999999
Q ss_pred cCcccCC
Q 008121 561 LAALTPN 567 (577)
Q Consensus 561 la~~~~~ 567 (577)
+|+....
T Consensus 178 ~a~~~~~ 184 (405)
T 3rgf_A 178 FARLFNS 184 (405)
T ss_dssp CCC----
T ss_pred CceecCC
Confidence 9987654
No 243
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.91 E-value=4.1e-24 Score=218.67 Aligned_cols=157 Identities=20% Similarity=0.297 Sum_probs=120.0
Q ss_pred hcCCCcc-ceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEe----CCe
Q 008121 409 TNSFSQE-FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE----HGQ 482 (577)
Q Consensus 409 ~~~~~~~-~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~ 482 (577)
.++|... +.||+|+||.||+|... +++.||||++... .... .+....+..++||||+++++++.. ...
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~---~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS---PKAR---QEVDHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS---HHHH---HHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc---HHHH---HHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 4567664 46999999999999876 6899999998543 1222 222334567799999999999876 445
Q ss_pred EEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC---CCCeEEecc
Q 008121 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---ELNPHLSDC 559 (577)
Q Consensus 483 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~---~~~~kl~DF 559 (577)
.++||||+++|+|.+++... ....+++.++..|+.|++.||+|||+. +|+||||||+|||++. ++.+||+||
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Df 175 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQER--GDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDF 175 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred EEEEEeccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecc
Confidence 89999999999999999732 335799999999999999999999999 9999999999999976 456999999
Q ss_pred ccCcccCCCccccccCC
Q 008121 560 GLAALTPNTERQVITGT 576 (577)
Q Consensus 560 Gla~~~~~~~~~~~~Gt 576 (577)
|+++...........||
T Consensus 176 g~~~~~~~~~~~~~~~t 192 (336)
T 3fhr_A 176 GFAKETTQNALQTPCYT 192 (336)
T ss_dssp TTCEEC-----------
T ss_pred ccceeccccccccCCCC
Confidence 99997766555555555
No 244
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.91 E-value=1.7e-24 Score=216.34 Aligned_cols=154 Identities=27% Similarity=0.400 Sum_probs=124.5
Q ss_pred hcCCCccceeccCccceEEEEEEc--CCc--EEEEEEcccccc-chHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA--NGK--IMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~--~~~--~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 483 (577)
.++|...+.||+|+||.||+|.+. +++ .||||+++.... .....+++.+|++++++++||||+++++++.... .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 356888899999999999999763 233 689999865432 2345678999999999999999999999998765 8
Q ss_pred EEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCc
Q 008121 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (577)
Q Consensus 484 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~ 563 (577)
++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp EEEEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eeeEecccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccc
Confidence 8999999999999999642 34689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCc
Q 008121 564 LTPNTE 569 (577)
Q Consensus 564 ~~~~~~ 569 (577)
......
T Consensus 170 ~~~~~~ 175 (291)
T 1u46_A 170 ALPQND 175 (291)
T ss_dssp ECCC-C
T ss_pred cccccc
Confidence 775443
No 245
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.91 E-value=3.7e-24 Score=237.66 Aligned_cols=153 Identities=25% Similarity=0.391 Sum_probs=132.7
Q ss_pred hhcCCCccceeccCccceEEEEEEcC----CcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeE
Q 008121 408 ATNSFSQEFLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (577)
Q Consensus 408 ~~~~~~~~~~lg~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 483 (577)
..++|...+.||+|+||.||+|.+.. +..||||+++... .....+.|.+|+.++++++||||+++++++. ++..
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~ 465 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 465 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence 34678888999999999999998743 4679999986532 3445678999999999999999999999985 4568
Q ss_pred EEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCc
Q 008121 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (577)
Q Consensus 484 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~ 563 (577)
|+||||+++|+|.++++. ....+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 466 ~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQV---RKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp EEEEECCTTCBHHHHHHH---TTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred EEEEEcCCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCe
Confidence 999999999999999963 234689999999999999999999999 99999999999999999999999999999
Q ss_pred ccCCC
Q 008121 564 LTPNT 568 (577)
Q Consensus 564 ~~~~~ 568 (577)
.....
T Consensus 540 ~~~~~ 544 (656)
T 2j0j_A 540 YMEDS 544 (656)
T ss_dssp SCCC-
T ss_pred ecCCC
Confidence 77544
No 246
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.91 E-value=6.2e-24 Score=216.79 Aligned_cols=158 Identities=19% Similarity=0.310 Sum_probs=133.1
Q ss_pred hcCCCccceeccCccceEEEEEE--cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCc------eeeEeeEEEeC
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF--ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN------IVTLAGYCAEH 480 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~~~~~~~ 480 (577)
.++|...+.||+|+||.||+|.. .+++.||||+++.. ....+.+.+|+++++.++|++ ++++++++...
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~ 89 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH 89 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence 35788899999999999999976 35889999998643 344567888999998887664 99999999999
Q ss_pred CeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC----------
Q 008121 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---------- 550 (577)
Q Consensus 481 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~---------- 550 (577)
+..++||||+ +++|.+++... ....+++.++..++.|+++||+|||+. +|+||||||+|||++.
T Consensus 90 ~~~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~ 163 (339)
T 1z57_A 90 GHICIVFELL-GLSTYDFIKEN--GFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPK 163 (339)
T ss_dssp TEEEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC--
T ss_pred CcEEEEEcCC-CCCHHHHHHhc--CCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCc
Confidence 9999999999 88999999732 334689999999999999999999999 9999999999999987
Q ss_pred ---------CCCeEEeccccCcccCCCccccccCC
Q 008121 551 ---------ELNPHLSDCGLAALTPNTERQVITGT 576 (577)
Q Consensus 551 ---------~~~~kl~DFGla~~~~~~~~~~~~Gt 576 (577)
++.+||+|||+++..... .....||
T Consensus 164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~-~~~~~gt 197 (339)
T 1z57_A 164 IKRDERTLINPDIKVVDFGSATYDDEH-HSTLVST 197 (339)
T ss_dssp --CEEEEESCCCEEECCCSSCEETTSC-CCSSCSC
T ss_pred cccccccccCCCceEeeCcccccCccc-cccccCC
Confidence 678999999999875433 2334454
No 247
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.90 E-value=5.4e-24 Score=213.16 Aligned_cols=150 Identities=22% Similarity=0.325 Sum_probs=125.1
Q ss_pred hhcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEE-EeCCeEEE
Q 008121 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC-AEHGQRLL 485 (577)
Q Consensus 408 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~-~~~~~~~l 485 (577)
..++|...+.||+|+||.||+|.. .+++.||||++.... ..+++.+|++++..++|++++..++++ ...+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT----KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc----cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEE
Confidence 356899999999999999999986 568999999865432 223578899999999988877666655 66778899
Q ss_pred EEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---CCCCCeEEeccccC
Q 008121 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL---DDELNPHLSDCGLA 562 (577)
Q Consensus 486 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl---~~~~~~kl~DFGla 562 (577)
||||+ +|+|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||++
T Consensus 83 v~e~~-~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a 155 (296)
T 4hgt_A 83 VMELL-GPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEECC-CCBHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEcc-CCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccc
Confidence 99999 9999999963 245699999999999999999999999 99999999999999 78899999999999
Q ss_pred cccCCC
Q 008121 563 ALTPNT 568 (577)
Q Consensus 563 ~~~~~~ 568 (577)
+.....
T Consensus 156 ~~~~~~ 161 (296)
T 4hgt_A 156 KKYRDA 161 (296)
T ss_dssp EECBCT
T ss_pred eeccCc
Confidence 976544
No 248
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.90 E-value=5e-24 Score=216.95 Aligned_cols=156 Identities=25% Similarity=0.375 Sum_probs=127.6
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHH-HhhcCCCCceeeEeeEEEeCCeEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVS-NMSRLRHPNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~-~l~~l~H~niv~l~~~~~~~~~~~lv 486 (577)
.++|...+.||+|+||.||+|... +++.||||+++... ......++..|+. +++.++||||+++++++...+..++|
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV-DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC-CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc-CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 357788899999999999999874 68999999997543 2334445556655 77888999999999999999999999
Q ss_pred EEecCCCCHHHhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCccc
Q 008121 487 YEYVGNGNLHDMLHFAD-DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~-~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~ 565 (577)
|||+++ +|.+++.... .....+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||+++..
T Consensus 100 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 100 MELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp ECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred EeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 999975 8888775321 23567899999999999999999999852 7999999999999999999999999999876
Q ss_pred CCC
Q 008121 566 PNT 568 (577)
Q Consensus 566 ~~~ 568 (577)
...
T Consensus 177 ~~~ 179 (327)
T 3aln_A 177 VDS 179 (327)
T ss_dssp ---
T ss_pred ccc
Confidence 543
No 249
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=1.6e-23 Score=205.07 Aligned_cols=182 Identities=23% Similarity=0.285 Sum_probs=152.4
Q ss_pred CCccEEeeCCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccC
Q 008121 74 SWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIAS 151 (577)
Q Consensus 74 ~w~gv~C~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~ 151 (577)
.|.|..|.. ..+.+++++++++ .+|..+. ++|+.|+|++|+|++..|..+. ++|++|+|++|+|++..|..|..
T Consensus 6 ~~~gC~C~~-~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 81 (251)
T 3m19_A 6 TVTGCTCNE-GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDD 81 (251)
T ss_dssp HHHSSEEEG-GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTT
T ss_pred CCCceEcCC-CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhcc
Confidence 788999963 3446899999998 4555554 6899999999999987776665 89999999999999988888999
Q ss_pred CCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccc-cCCCCC-ccEEE
Q 008121 152 MVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSGLP-LTTLN 229 (577)
Q Consensus 152 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~L~ 229 (577)
+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++.++ .+..++ |+.|+
T Consensus 82 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 161 (251)
T 3m19_A 82 LTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLS 161 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEE
Confidence 9999999999999998888889999999999999999997666678899999999999999998776 466655 99999
Q ss_pred eecCccccccCccc---ccccceeecCCcCCCC
Q 008121 230 VANNHFSGWIPREL---ISIRTFIYDGNSFDNG 259 (577)
Q Consensus 230 l~~N~l~g~~p~~l---~~l~~l~~~~n~~~~~ 259 (577)
|++|+|++..|..+ .+++.+++++|++.|.
T Consensus 162 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 162 LSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 99999997766554 4567888999988653
No 250
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.90 E-value=1.3e-23 Score=224.67 Aligned_cols=150 Identities=23% Similarity=0.332 Sum_probs=128.2
Q ss_pred hcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCC-CceeeEeeEEEeCCeEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH-PNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H-~niv~l~~~~~~~~~~~lv 486 (577)
.++|...+.||+|+||.||+|.. .+++.||||++..... ..++.+|++++..++| ++|..+..++...+..++|
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lv 81 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLV 81 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEE
Confidence 35788899999999999999986 5689999998754322 2347889999999987 4566667777888899999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---CCCCCeEEeccccCc
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL---DDELNPHLSDCGLAA 563 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl---~~~~~~kl~DFGla~ 563 (577)
|||+ +|+|.++++.. ...+++.+++.|+.||+.||+|||+. +||||||||+|||+ +.++.+||+|||+++
T Consensus 82 me~~-g~sL~~ll~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (483)
T 3sv0_A 82 MDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (483)
T ss_dssp EECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EECC-CCCHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence 9999 99999999632 45699999999999999999999999 99999999999999 688999999999999
Q ss_pred ccCCCc
Q 008121 564 LTPNTE 569 (577)
Q Consensus 564 ~~~~~~ 569 (577)
.+....
T Consensus 155 ~~~~~~ 160 (483)
T 3sv0_A 155 KYRDTS 160 (483)
T ss_dssp ECBCTT
T ss_pred eccCCc
Confidence 775543
No 251
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.90 E-value=1.1e-23 Score=211.02 Aligned_cols=150 Identities=22% Similarity=0.326 Sum_probs=128.2
Q ss_pred hcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEE-EeCCeEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC-AEHGQRLLV 486 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~-~~~~~~~lv 486 (577)
.++|...+.||+|+||.||+|.. .+++.||||++.... ..+++.+|+.++..++|++++..+.++ ...+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT----KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS----SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc----chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEE
Confidence 46788899999999999999986 678999999986432 223588999999999998877665555 667788999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---CCCCCeEEeccccCc
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL---DDELNPHLSDCGLAA 563 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl---~~~~~~kl~DFGla~ 563 (577)
|||+ +|+|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++
T Consensus 84 ~e~~-~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 156 (296)
T 3uzp_A 84 MELL-GPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EECC-CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEec-CCCHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcc
Confidence 9999 9999999963 245699999999999999999999999 99999999999999 488999999999999
Q ss_pred ccCCCc
Q 008121 564 LTPNTE 569 (577)
Q Consensus 564 ~~~~~~ 569 (577)
......
T Consensus 157 ~~~~~~ 162 (296)
T 3uzp_A 157 KYRDAR 162 (296)
T ss_dssp ECBCTT
T ss_pred cccccc
Confidence 765543
No 252
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.90 E-value=7.7e-24 Score=221.20 Aligned_cols=136 Identities=19% Similarity=0.293 Sum_probs=114.8
Q ss_pred hcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCC--------CCceeeEeeEEE-
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR--------HPNIVTLAGYCA- 478 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--------H~niv~l~~~~~- 478 (577)
.++|...+.||+|+||.||+|.. .+++.||||+++.. ....+.+.+|+++++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~ 112 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI 112 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence 46788999999999999999976 45889999999643 344667889999999885 788999999987
Q ss_pred ---eCCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC
Q 008121 479 ---EHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL 552 (577)
Q Consensus 479 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~ 552 (577)
.....++||||+ +|+|.+.+.. .....+++..+..|+.|++.||+|||+++ +|+||||||+|||++.++
T Consensus 113 ~~~~~~~~~lv~e~~-~~~l~~~~~~--~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~ 184 (397)
T 1wak_A 113 SGVNGTHICMVFEVL-GHHLLKWIIK--SNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNE 184 (397)
T ss_dssp EETTEEEEEEEECCC-CCBHHHHHHH--TTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCH
T ss_pred cCCCCceEEEEEecc-CccHHHHHHh--cccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccc
Confidence 455789999999 6677777653 23356999999999999999999999864 799999999999999775
No 253
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.90 E-value=3.6e-24 Score=216.78 Aligned_cols=134 Identities=25% Similarity=0.430 Sum_probs=106.4
Q ss_pred CcEEEEEcCC-CCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEE
Q 008121 83 SAVVSIDISG-LGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (577)
Q Consensus 83 ~~v~~l~l~~-~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 159 (577)
..++.|+|++ |.+.+.+|..|+++++|++|+|++|+|++.+|..+. ++|++|+|++|++++.+|..|..+++|++|+
T Consensus 76 ~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 155 (313)
T 1ogq_A 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred CCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEE
Confidence 5688888985 888888888888888888888888888888887665 7888888888888888888888888888888
Q ss_pred eccCCCcccccccccCCC-CCcEEeCcCCcccCCCCCCccCCCCCCeEEccCccccccc
Q 008121 160 VSRNSLTQSIGDIFGNLA-GLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSL 217 (577)
Q Consensus 160 L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~ 217 (577)
|++|++++.+|..+.+++ +|++|+|++|++++.+|..+..++ |++|+|++|.+++.+
T Consensus 156 L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~ 213 (313)
T 1ogq_A 156 FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDA 213 (313)
T ss_dssp CCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECC
T ss_pred CcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcC
Confidence 888888888888888887 788888888877777776666554 666666666655533
No 254
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.90 E-value=1e-23 Score=213.47 Aligned_cols=152 Identities=21% Similarity=0.331 Sum_probs=118.4
Q ss_pred hcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 487 (577)
.++|...+.||+|+||.||+|... +++.||||++..........+.+.++..+++.++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 356788899999999999999875 6899999999755433333444555666788899999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE-VCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~-~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~ 566 (577)
||+ ++.+..+... ....+++..+..++.|+++||+|||+ . +|+||||||+||+++.++.+||+|||+++...
T Consensus 104 e~~-~~~~~~l~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 104 ELM-GTCAEKLKKR---MQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp CCC-SEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred ecc-CCcHHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 999 5555555432 24568999999999999999999998 5 89999999999999999999999999998654
Q ss_pred C
Q 008121 567 N 567 (577)
Q Consensus 567 ~ 567 (577)
.
T Consensus 177 ~ 177 (318)
T 2dyl_A 177 D 177 (318)
T ss_dssp -
T ss_pred C
Confidence 4
No 255
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.90 E-value=5.7e-24 Score=225.28 Aligned_cols=149 Identities=23% Similarity=0.271 Sum_probs=119.8
Q ss_pred CCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcC-CCCceeeEeeEEEeCCeEEEEEEe
Q 008121 411 SFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVYEY 489 (577)
Q Consensus 411 ~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~ 489 (577)
.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|++++.++ +|||||++++++.+.+..|+||||
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~ 90 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALEL 90 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEec
Confidence 34456789999999998877778999999998542 234578899999876 899999999999999999999999
Q ss_pred cCCCCHHHhhhhccCCCCC---CCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC-------------CC
Q 008121 490 VGNGNLHDMLHFADDSSKN---LTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE-------------LN 553 (577)
Q Consensus 490 ~~~g~L~~~l~~~~~~~~~---l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~-------------~~ 553 (577)
++ |+|.+++......... .++..++.|+.||+.||+|||+. +|+||||||+|||++.+ +.
T Consensus 91 ~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~ 166 (434)
T 2rio_A 91 CN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLR 166 (434)
T ss_dssp CS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCE
T ss_pred CC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceE
Confidence 95 6999999743222111 13345678999999999999999 99999999999999754 48
Q ss_pred eEEeccccCcccCCC
Q 008121 554 PHLSDCGLAALTPNT 568 (577)
Q Consensus 554 ~kl~DFGla~~~~~~ 568 (577)
+||+|||+++.....
T Consensus 167 ~kL~DFG~a~~~~~~ 181 (434)
T 2rio_A 167 ILISDFGLCKKLDSG 181 (434)
T ss_dssp EEECCCTTCEECCC-
T ss_pred EEEcccccceecCCC
Confidence 999999999987654
No 256
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.89 E-value=1.7e-23 Score=221.22 Aligned_cols=148 Identities=20% Similarity=0.275 Sum_probs=121.0
Q ss_pred hcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcC-CCCceeeEeeEEEeCCeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 487 (577)
..+|...+.||+|+||+||.....+++.||||++..... ..+.+|+++++++ +|||||++++++.+.+..|+||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~ 97 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAI 97 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEE
Confidence 346778899999999997766667899999999864322 2256789999998 7999999999999999999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC-----CCCeEEeccccC
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-----ELNPHLSDCGLA 562 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~-----~~~~kl~DFGla 562 (577)
||++ |+|.+++... .....+..+..|+.|+++||+|||+. +|+||||||+|||++. ...+||+|||+|
T Consensus 98 E~~~-g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a 170 (432)
T 3p23_A 98 ELCA-ATLQEYVEQK---DFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170 (432)
T ss_dssp ECCS-EEHHHHHHSS---SCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred ECCC-CCHHHHHHhc---CCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence 9996 6999999632 23345556778999999999999999 9999999999999943 346889999999
Q ss_pred cccCCC
Q 008121 563 ALTPNT 568 (577)
Q Consensus 563 ~~~~~~ 568 (577)
+.....
T Consensus 171 ~~~~~~ 176 (432)
T 3p23_A 171 KKLAVG 176 (432)
T ss_dssp ECC---
T ss_pred eeccCC
Confidence 876543
No 257
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.89 E-value=3.9e-23 Score=212.35 Aligned_cols=158 Identities=20% Similarity=0.315 Sum_probs=131.7
Q ss_pred hcCCCccceeccCccceEEEEEEc-CC-cEEEEEEccccccchHHHHHHHHHHHHhhcCCCCc------eeeEeeEEEeC
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFA-NG-KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN------IVTLAGYCAEH 480 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~~~~~~~ 480 (577)
.++|...+.||+|+||.||+|... ++ +.||+|+++.. ....+.+.+|++++++++|++ ++.+++++...
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 94 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV---GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH 94 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc---ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence 467888999999999999999874 34 68999998643 344567888999999987766 99999999999
Q ss_pred CeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee------------
Q 008121 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL------------ 548 (577)
Q Consensus 481 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl------------ 548 (577)
+..++||||+ +|++.+.+... ....+++.++..|+.|++.||+|||+. +|+||||||+|||+
T Consensus 95 ~~~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 168 (355)
T 2eu9_A 95 GHMCIAFELL-GKNTFEFLKEN--NFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEH 168 (355)
T ss_dssp TEEEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC
T ss_pred CeEEEEEecc-CCChHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccc
Confidence 9999999999 67788877632 335689999999999999999999999 99999999999999
Q ss_pred -------CCCCCeEEeccccCcccCCCccccccCC
Q 008121 549 -------DDELNPHLSDCGLAALTPNTERQVITGT 576 (577)
Q Consensus 549 -------~~~~~~kl~DFGla~~~~~~~~~~~~Gt 576 (577)
+.++.+||+|||+++..... .....||
T Consensus 169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~-~~~~~gt 202 (355)
T 2eu9_A 169 KSCEEKSVKNTSIRVADFGSATFDHEH-HTTIVAT 202 (355)
T ss_dssp -CCCEEEESCCCEEECCCTTCEETTSC-CCSSCSC
T ss_pred ccccccccCCCcEEEeecCcccccccc-ccCCcCC
Confidence 56789999999999875433 2334454
No 258
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.89 E-value=4.8e-23 Score=214.55 Aligned_cols=161 Identities=24% Similarity=0.246 Sum_probs=130.9
Q ss_pred hhcCCCccceeccCccceEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCC-CC-----ceeeEeeEEEeC
Q 008121 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HP-----NIVTLAGYCAEH 480 (577)
Q Consensus 408 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-H~-----niv~l~~~~~~~ 480 (577)
..++|...+.||+|+||.||+|... +++.||||+++.. .....++..|++++..++ |+ +|+++++++...
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 3568889999999999999999765 5889999999643 334556777888887775 44 499999999999
Q ss_pred CeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC--CCCCeEEec
Q 008121 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD--DELNPHLSD 558 (577)
Q Consensus 481 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~--~~~~~kl~D 558 (577)
+..++||||++ |+|.+++... ....+++..+..++.|++.||.|||++ ..+||||||||+|||++ .++.+||+|
T Consensus 129 ~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 129 NHLCLVFEMLS-YNLYDLLRNT--NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp TEEEEEEECCC-CBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred CceEEEEecCC-CCHHHHHhhc--CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 99999999996 5999999743 235689999999999999999999953 12899999999999994 578899999
Q ss_pred cccCcccCCCccccccCC
Q 008121 559 CGLAALTPNTERQVITGT 576 (577)
Q Consensus 559 FGla~~~~~~~~~~~~Gt 576 (577)
||+|+..... .....||
T Consensus 205 FG~a~~~~~~-~~~~~~t 221 (382)
T 2vx3_A 205 FGSSCQLGQR-IYQYIQS 221 (382)
T ss_dssp CTTCEETTCC-CCSSCSC
T ss_pred ccCceecccc-cccccCC
Confidence 9999876443 2334454
No 259
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.89 E-value=1.8e-22 Score=201.37 Aligned_cols=176 Identities=22% Similarity=0.251 Sum_probs=157.4
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCc-CCCcCCCCccCCCCccEEE
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNN-FSGNLPYSIASMVSLSYLN 159 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~L~ 159 (577)
..++.|+|++|++++..+..|..+++|++|+|++|+|++..|..+. ++|++|+|++|+ +....|..|..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 3689999999999998888999999999999999999987777665 899999999997 8877789999999999999
Q ss_pred eccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCccccccccc-CCCCC-ccEEEeecCcccc
Q 008121 160 VSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSGLP-LTTLNVANNHFSG 237 (577)
Q Consensus 160 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~L~l~~N~l~g 237 (577)
|++|++++..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|+|++.++. +..++ |+.|++++|.+++
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 191 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccc
Confidence 999999999999999999999999999999977777799999999999999999987763 66655 9999999999999
Q ss_pred ccCcccc---cccceeecCCcCCC
Q 008121 238 WIPRELI---SIRTFIYDGNSFDN 258 (577)
Q Consensus 238 ~~p~~l~---~l~~l~~~~n~~~~ 258 (577)
..|..+. +++.|++++|.+..
T Consensus 192 ~~~~~~~~l~~L~~L~l~~n~l~~ 215 (285)
T 1ozn_A 192 VHPHAFRDLGRLMTLYLFANNLSA 215 (285)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSC
T ss_pred cCHhHccCcccccEeeCCCCcCCc
Confidence 8887765 56778899998754
No 260
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.89 E-value=1.2e-23 Score=230.19 Aligned_cols=155 Identities=26% Similarity=0.387 Sum_probs=131.9
Q ss_pred cCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEEe------CCe
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE------HGQ 482 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~------~~~ 482 (577)
++|...+.||+|+||.||+|.. .+|+.||||+++.. ......+.|.+|++++++++||||+++++++.. .+.
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 5789999999999999999976 45899999998754 245567789999999999999999999998755 667
Q ss_pred EEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC---eEEecc
Q 008121 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN---PHLSDC 559 (577)
Q Consensus 483 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~---~kl~DF 559 (577)
.++||||+++|+|.+++.... ....+++..+..|+.|++.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~-~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSS-CTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred EEEEEEeCCCCCHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccc
Confidence 899999999999999997432 234689999999999999999999999 9999999999999997665 999999
Q ss_pred ccCcccCCCc
Q 008121 560 GLAALTPNTE 569 (577)
Q Consensus 560 Gla~~~~~~~ 569 (577)
|+++......
T Consensus 169 G~a~~~~~~~ 178 (676)
T 3qa8_A 169 GYAKELDQGE 178 (676)
T ss_dssp CCCCBTTSCC
T ss_pred cccccccccc
Confidence 9999765443
No 261
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=1.7e-22 Score=197.82 Aligned_cols=165 Identities=24% Similarity=0.315 Sum_probs=149.3
Q ss_pred CCccEEeeC-----------CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCc
Q 008121 74 SWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNN 140 (577)
Q Consensus 74 ~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~ 140 (577)
.|..|.|.. ..++.|+|++|++++..+..|.++++|++|+|++|+|++..|..+. ++|++|+|++|+
T Consensus 15 ~~~~l~~~~~~l~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 94 (251)
T 3m19_A 15 GKKEVDCQGKSLDSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQ 94 (251)
T ss_dssp GGTEEECTTCCCSSCCSCCCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred CCeEEecCCCCccccCCCCCCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCc
Confidence 577788864 3688999999999999999999999999999999999987776554 899999999999
Q ss_pred CCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccc-c
Q 008121 141 FSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-V 219 (577)
Q Consensus 141 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~ 219 (577)
|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++.++ .
T Consensus 95 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 174 (251)
T 3m19_A 95 LASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGA 174 (251)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred ccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHH
Confidence 998888899999999999999999998888889999999999999999997777789999999999999999998776 4
Q ss_pred CCCCC-ccEEEeecCccccc
Q 008121 220 FSGLP-LTTLNVANNHFSGW 238 (577)
Q Consensus 220 ~~~~~-L~~L~l~~N~l~g~ 238 (577)
+..++ |+.|+|++|.+++.
T Consensus 175 ~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 175 FDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTCTTCCEEECCSCCBCTT
T ss_pred HhCCCCCCEEEeeCCceeCC
Confidence 66655 99999999999976
No 262
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.89 E-value=1.4e-23 Score=227.49 Aligned_cols=139 Identities=15% Similarity=0.249 Sum_probs=110.0
Q ss_pred CccceeccCccceEEEEEEcCCcEEEEEEccccccc------hHHHHHHHHHHHHhhcCCCCceeeEeeEEEeCCeEEEE
Q 008121 413 SQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALS------LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 413 ~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 486 (577)
...+.||+|+||.||+|.. .++.+++|+....... ....++|.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3456899999999999954 4778888876433221 11245689999999999999999777777777788999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcccC
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~~ 566 (577)
|||+++|+|.++++. +..|+.|+++||+|||++ +|+||||||+|||+++ .+||+|||+|+...
T Consensus 418 mE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 418 MSYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp EECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred EECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 999999999999962 568999999999999999 9999999999999999 99999999999886
Q ss_pred CCc
Q 008121 567 NTE 569 (577)
Q Consensus 567 ~~~ 569 (577)
..+
T Consensus 481 ~~~ 483 (540)
T 3en9_A 481 LDE 483 (540)
T ss_dssp CHH
T ss_pred Ccc
Confidence 643
No 263
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=3.1e-22 Score=200.20 Aligned_cols=175 Identities=23% Similarity=0.223 Sum_probs=155.5
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEecc
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (577)
..++.|+|++|.+++..+..|..+++|++|+|++|+|++..+....++|++|+|++|+|+ .+|..+..+++|++|+|++
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~ 109 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSF 109 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECCSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCS
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCCCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCC
Confidence 468999999999999999999999999999999999996555444589999999999998 7888999999999999999
Q ss_pred CCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCccccccccc-CCCCC-ccEEEeecCccccccC
Q 008121 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSGLP-LTTLNVANNHFSGWIP 240 (577)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~L~l~~N~l~g~~p 240 (577)
|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++.++. +..++ |+.|+|++|+|+ .+|
T Consensus 110 N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip 188 (290)
T 1p9a_G 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIP 188 (290)
T ss_dssp SCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCC
T ss_pred CcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccC
Confidence 999998889999999999999999999977777789999999999999999987764 45555 999999999999 777
Q ss_pred cccc---cccceeecCCcCCCC
Q 008121 241 RELI---SIRTFIYDGNSFDNG 259 (577)
Q Consensus 241 ~~l~---~l~~l~~~~n~~~~~ 259 (577)
..+. +++.+.+.+|+|.|.
T Consensus 189 ~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 189 KGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp TTTTTTCCCSEEECCSCCBCCS
T ss_pred hhhcccccCCeEEeCCCCccCc
Confidence 7654 467788999999763
No 264
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.89 E-value=2e-22 Score=200.08 Aligned_cols=190 Identities=21% Similarity=0.255 Sum_probs=155.4
Q ss_pred CCCCCCCc--cEEeeC-----------CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccE
Q 008121 69 DPCGESWK--GVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTS 133 (577)
Q Consensus 69 ~~c~~~w~--gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~ 133 (577)
|||.+.+. .|.|.+ ..++.|+|++|++++..+..|.++++|++|+|++|++++..+..+. ++|++
T Consensus 1 ~~C~~~~~~~~~~c~~~~l~~ip~~l~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 80 (276)
T 2z62_A 1 EPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLST 80 (276)
T ss_dssp CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCceeccCCceEEecCCCccccCCCCCCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCE
Confidence 56755444 477753 2589999999999988888999999999999999999976665554 89999
Q ss_pred EEccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcccCC-CCCCccCCCCCCeEEccCcc
Q 008121 134 LNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGD-LPNSFISLSNISSLYLQNNQ 212 (577)
Q Consensus 134 L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~-~p~~~~~l~~L~~L~l~~N~ 212 (577)
|+|++|++++..|..|.++++|++|+|++|++++..+..+.++++|++|+|++|++++. +|..|..+++|++|+|++|+
T Consensus 81 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~ 160 (276)
T 2z62_A 81 LILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 160 (276)
T ss_dssp EECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSC
T ss_pred EECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCC
Confidence 99999999998889999999999999999999998888899999999999999999863 68999999999999999999
Q ss_pred cccccc-cCCCCC-cc----EEEeecCccccccCcccc--cccceeecCCcCCC
Q 008121 213 VTGSLN-VFSGLP-LT----TLNVANNHFSGWIPRELI--SIRTFIYDGNSFDN 258 (577)
Q Consensus 213 l~~~~~-~~~~~~-L~----~L~l~~N~l~g~~p~~l~--~l~~l~~~~n~~~~ 258 (577)
|++.++ .+..+. |+ .|++++|.+++..+..+. +++.|++++|.+..
T Consensus 161 l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~ 214 (276)
T 2z62_A 161 IQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKS 214 (276)
T ss_dssp CCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSC
T ss_pred CCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceee
Confidence 988653 232221 33 788888888765554433 56777778777653
No 265
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.89 E-value=1.4e-22 Score=204.25 Aligned_cols=191 Identities=23% Similarity=0.329 Sum_probs=156.1
Q ss_pred CCCCCCCccEEeeC-----------CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCc---------------
Q 008121 69 DPCGESWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDT--------------- 122 (577)
Q Consensus 69 ~~c~~~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~--------------- 122 (577)
++|.|.|.+|.|+. ..++.|+|++|+++...+..|.++++|++|+|++|+++..
T Consensus 3 ~~C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~ 82 (306)
T 2z66_A 3 SRCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKY 82 (306)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCE
T ss_pred CCCeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCE
Confidence 56778999999975 3688999999999866556688999999999999988732
Q ss_pred ----------CCCCC--CCCccEEEccCCcCCCcCC-CCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcc
Q 008121 123 ----------IPYQL--PPNLTSLNLASNNFSGNLP-YSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNF 189 (577)
Q Consensus 123 ----------~p~~~--~~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 189 (577)
+|..+ .++|++|+|++|++++..+ ..+..+++|++|+|++|++++..|..|.++++|++|+|++|++
T Consensus 83 L~Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 162 (306)
T 2z66_A 83 LDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSF 162 (306)
T ss_dssp EECCSCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEE
T ss_pred EECCCCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcc
Confidence 11112 1678888888888886655 6788999999999999999999999999999999999999999
Q ss_pred cC-CCCCCccCCCCCCeEEccCcccccccc-cCCCCC-ccEEEeecCccccccCccc---ccccceeecCCcCCCC
Q 008121 190 SG-DLPNSFISLSNISSLYLQNNQVTGSLN-VFSGLP-LTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNG 259 (577)
Q Consensus 190 ~g-~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~L~l~~N~l~g~~p~~l---~~l~~l~~~~n~~~~~ 259 (577)
++ .+|..+..+++|++|+|++|+|++.++ .+..++ |+.|++++|++++..+..+ .+++.|++++|.+...
T Consensus 163 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 238 (306)
T 2z66_A 163 QENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTS 238 (306)
T ss_dssp GGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBC
T ss_pred ccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCccc
Confidence 87 578899999999999999999998754 465555 9999999999997666554 4677888999987643
No 266
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.88 E-value=4.4e-23 Score=213.80 Aligned_cols=151 Identities=17% Similarity=0.307 Sum_probs=127.9
Q ss_pred hcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccccchHHHHHHHHHHHHhhcCC-----------CCceeeEeeE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-----------HPNIVTLAGY 476 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-----------H~niv~l~~~ 476 (577)
.++|...+.||+|+||.||+|.. .+++.||||++... ....+.+.+|+.++.+++ ||||++++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC---ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 35788899999999999999986 56899999998643 334566888999888876 8999999999
Q ss_pred EEeCC----eEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC---
Q 008121 477 CAEHG----QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD--- 549 (577)
Q Consensus 477 ~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~--- 549 (577)
+...+ ..++||||+ +++|.+++... ....+++..+..|+.|++.||+|||+++ +|+||||||+|||++
T Consensus 95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 95 FNHKGPNGVHVVMVFEVL-GENLLALIKKY--EHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVD 169 (373)
T ss_dssp EEEEETTEEEEEEEECCC-CEEHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEE
T ss_pred hhccCCCCceEEEEEecC-CCCHHHHHHHh--hccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccC
Confidence 87654 789999999 89999999743 3455899999999999999999999963 799999999999994
Q ss_pred ---CCCCeEEeccccCcccCC
Q 008121 550 ---DELNPHLSDCGLAALTPN 567 (577)
Q Consensus 550 ---~~~~~kl~DFGla~~~~~ 567 (577)
..+.+||+|||+++....
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~ 190 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDE 190 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTB
T ss_pred CCcCcceEEEcccccccccCC
Confidence 445899999999987654
No 267
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=6.7e-23 Score=203.98 Aligned_cols=146 Identities=14% Similarity=0.088 Sum_probs=116.5
Q ss_pred HHHHhhcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccch----------------HHHHHHHHHHHHhhcCCC
Q 008121 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSL----------------QEEDNFLEAVSNMSRLRH 467 (577)
Q Consensus 404 ~~~~~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~----------------~~~~~~~~e~~~l~~l~H 467 (577)
.+......|...+.||+|+||.||+|.+.+|+.||+|.++...... .....+.+|++++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 3444455677779999999999999988779999999986432111 23567899999999999
Q ss_pred CceeeEeeEEEeCCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCee
Q 008121 468 PNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANIL 547 (577)
Q Consensus 468 ~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIL 547 (577)
| +++.+++.. +..|+||||+++|+|.+ +.. .....++.|+++||+|||+. +|+||||||+|||
T Consensus 163 -~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NIL 225 (282)
T 1zar_A 163 -G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVL 225 (282)
T ss_dssp -T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEE
T ss_pred -C-CCcCeEEec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEE
Confidence 4 666665543 45699999999999988 521 12457999999999999999 9999999999999
Q ss_pred eCCCCCeEEeccccCcccCCC
Q 008121 548 LDDELNPHLSDCGLAALTPNT 568 (577)
Q Consensus 548 l~~~~~~kl~DFGla~~~~~~ 568 (577)
++ ++.+||+|||+|+.....
T Consensus 226 l~-~~~vkl~DFG~a~~~~~~ 245 (282)
T 1zar_A 226 VS-EEGIWIIDFPQSVEVGEE 245 (282)
T ss_dssp EE-TTEEEECCCTTCEETTST
T ss_pred EE-CCcEEEEECCCCeECCCC
Confidence 99 999999999999976544
No 268
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.87 E-value=7.3e-22 Score=196.98 Aligned_cols=177 Identities=23% Similarity=0.269 Sum_probs=157.2
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCC-cCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEE
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNS-IHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 159 (577)
.+++.|+|++|.+++..|..|..+++|++|+|++|+ ++...|..+. ++|++|+|++|++++..|..|.++++|++|+
T Consensus 56 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 135 (285)
T 1ozn_A 56 RNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLY 135 (285)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEE
Confidence 589999999999999989999999999999999998 7755566665 8999999999999999899999999999999
Q ss_pred eccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccc-cCCCCC-ccEEEeecCcccc
Q 008121 160 VSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSGLP-LTTLNVANNHFSG 237 (577)
Q Consensus 160 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~L~l~~N~l~g 237 (577)
|++|++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|.+++..+ .+..++ |+.|++++|+|++
T Consensus 136 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 215 (285)
T 1ozn_A 136 LQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA 215 (285)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCc
Confidence 99999998888889999999999999999997666779999999999999999999754 566665 9999999999997
Q ss_pred ccCccc---ccccceeecCCcCCCC
Q 008121 238 WIPREL---ISIRTFIYDGNSFDNG 259 (577)
Q Consensus 238 ~~p~~l---~~l~~l~~~~n~~~~~ 259 (577)
..+..+ .+++.+++++|++.|.
T Consensus 216 ~~~~~~~~l~~L~~L~l~~N~~~c~ 240 (285)
T 1ozn_A 216 LPTEALAPLRALQYLRLNDNPWVCD 240 (285)
T ss_dssp CCHHHHTTCTTCCEEECCSSCEECS
T ss_pred CCHHHcccCcccCEEeccCCCccCC
Confidence 665544 4677889999998753
No 269
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.87 E-value=4e-22 Score=203.09 Aligned_cols=173 Identities=19% Similarity=0.269 Sum_probs=148.8
Q ss_pred CCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccC--------
Q 008121 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIAS-------- 151 (577)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~-------- 151 (577)
..+++.|+|++|.++ .+|..++.+++|++|+|++|+|+ .+|..+. ++|++|+|++|++.+.+|..++.
T Consensus 103 l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~ 180 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQ 180 (328)
T ss_dssp GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEE
T ss_pred CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhc
Confidence 457899999999999 88889999999999999999998 7787665 89999999999999999988765
Q ss_pred -CCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccc-cCCCCC-ccEE
Q 008121 152 -MVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSGLP-LTTL 228 (577)
Q Consensus 152 -l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~L 228 (577)
+++|++|+|++|+|+ .+|..++++++|++|+|++|++++ +|..+..+++|++|+|++|++.+.++ .+..++ |+.|
T Consensus 181 ~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L 258 (328)
T 4fcg_A 181 GLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRL 258 (328)
T ss_dssp ESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEE
T ss_pred cCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEE
Confidence 999999999999998 788889999999999999999995 77789999999999999999888765 455555 9999
Q ss_pred EeecCccccccCcccc---cccceeecCCcCCC
Q 008121 229 NVANNHFSGWIPRELI---SIRTFIYDGNSFDN 258 (577)
Q Consensus 229 ~l~~N~l~g~~p~~l~---~l~~l~~~~n~~~~ 258 (577)
+|++|++.+.+|..+. +++.|++++|++..
T Consensus 259 ~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~ 291 (328)
T 4fcg_A 259 ILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLS 291 (328)
T ss_dssp ECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCC
T ss_pred ECCCCCchhhcchhhhcCCCCCEEeCCCCCchh
Confidence 9999999999997665 45677888887654
No 270
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.86 E-value=3.9e-21 Score=204.71 Aligned_cols=188 Identities=19% Similarity=0.201 Sum_probs=153.0
Q ss_pred CCCC--CCccEEeeC-----------CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEE
Q 008121 70 PCGE--SWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSL 134 (577)
Q Consensus 70 ~c~~--~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L 134 (577)
.|.| .|..|.|.. ..++.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..+. ++|++|
T Consensus 49 ~C~C~~~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 128 (452)
T 3zyi_A 49 VCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTL 128 (452)
T ss_dssp TSEECSSSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCEECCCCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEE
Confidence 4544 367899974 3689999999999999999999999999999999999987776665 899999
Q ss_pred EccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcC-CcccCCCCCCccCCCCCCeEEccCccc
Q 008121 135 NLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSF-NNFSGDLPNSFISLSNISSLYLQNNQV 213 (577)
Q Consensus 135 ~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~l~~N~l 213 (577)
+|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|+.|+|++ |.+....+..|.++++|++|+|++|+|
T Consensus 129 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l 208 (452)
T 3zyi_A 129 ELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNI 208 (452)
T ss_dssp ECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred ECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcc
Confidence 9999999988888899999999999999999988887888899999999988 455533334688888888888888888
Q ss_pred ccccccCCCC-CccEEEeecCccccccCcccc---cccceeecCCcCCC
Q 008121 214 TGSLNVFSGL-PLTTLNVANNHFSGWIPRELI---SIRTFIYDGNSFDN 258 (577)
Q Consensus 214 ~~~~~~~~~~-~L~~L~l~~N~l~g~~p~~l~---~l~~l~~~~n~~~~ 258 (577)
++.+ .+..+ .|+.|+|++|+|++..|..+. +++.|.+++|.+..
T Consensus 209 ~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 256 (452)
T 3zyi_A 209 KDMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL 256 (452)
T ss_dssp SSCC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCE
T ss_pred cccc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCce
Confidence 8764 34443 388888888888877776554 45667777776653
No 271
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.86 E-value=3.6e-22 Score=210.09 Aligned_cols=155 Identities=18% Similarity=0.208 Sum_probs=115.8
Q ss_pred hcCCCccceeccCccceEEEEEE-cCCcEEEEEEccccc-cchHHHHHHHHHHHHhhcCCC-Ccee--------------
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAA-LSLQEEDNFLEAVSNMSRLRH-PNIV-------------- 471 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~H-~niv-------------- 471 (577)
...|...+.||+|+||.||+|.+ .+|+.||||+++... ......+.|.+|+.++..++| +|..
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 34577788999999999999985 568999999987322 122335679999999999987 2211
Q ss_pred -e------EeeEEEe-----CCeEEEEEEecCCCCHHHhhhhc---cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 008121 472 -T------LAGYCAE-----HGQRLLVYEYVGNGNLHDMLHFA---DDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536 (577)
Q Consensus 472 -~------l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~i 536 (577)
. +..++.. ....+++|+++ +|+|.++++.. ......+++..++.|+.|+++||+|||+. +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 1 1111111 12356667655 68999998532 23355688999999999999999999999 99
Q ss_pred eecCCCCCCeeeCCCCCeEEeccccCcccCC
Q 008121 537 VHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (577)
Q Consensus 537 vHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 567 (577)
|||||||+|||++.++.+||+|||+++....
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~ 263 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA 263 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTE
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCC
Confidence 9999999999999999999999999987543
No 272
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.85 E-value=2.7e-21 Score=185.23 Aligned_cols=156 Identities=26% Similarity=0.335 Sum_probs=123.4
Q ss_pred CCCCCCCccEEeeCCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCC
Q 008121 69 DPCGESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLP 146 (577)
Q Consensus 69 ~~c~~~w~gv~C~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p 146 (577)
..|.|.|..|.|. +++++ .+|..+. ++|+.|+|++|+|++..|..+. ++|++|+|++|+|++..|
T Consensus 7 ~~C~C~~~~v~c~----------~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~ 73 (220)
T 2v9t_B 7 AACTCSNNIVDCR----------GKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAP 73 (220)
T ss_dssp TTSEEETTEEECT----------TSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECT
T ss_pred CCCEECCCEEEcC----------CCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCH
Confidence 4576677766665 45555 3454443 6788899999998865554554 788999999999988888
Q ss_pred CCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCccccccccc-CCCCC-
Q 008121 147 YSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSGLP- 224 (577)
Q Consensus 147 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~- 224 (577)
..|.++++|++|+|++|+|+...+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++.++. +..++
T Consensus 74 ~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 153 (220)
T 2v9t_B 74 DAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA 153 (220)
T ss_dssp TTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred HHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCC
Confidence 8888899999999999999877777788889999999999999887788888888999999999998887653 55554
Q ss_pred ccEEEeecCcccc
Q 008121 225 LTTLNVANNHFSG 237 (577)
Q Consensus 225 L~~L~l~~N~l~g 237 (577)
|+.|+|++|.+..
T Consensus 154 L~~L~L~~N~~~c 166 (220)
T 2v9t_B 154 IQTMHLAQNPFIC 166 (220)
T ss_dssp CCEEECCSSCEEC
T ss_pred CCEEEeCCCCcCC
Confidence 8899999998874
No 273
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.85 E-value=1.1e-20 Score=187.06 Aligned_cols=174 Identities=22% Similarity=0.270 Sum_probs=104.5
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEecc
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (577)
..++.|++++|.++.. +.+..+++|++|+|++|++++.-...-.++|++|+|++|++++..+..|+.+++|++|+|++
T Consensus 41 ~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 118 (272)
T 3rfs_A 41 NSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVE 118 (272)
T ss_dssp TTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCCGGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred cceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCchhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCC
Confidence 4566666666666532 24666666666666666666421111125666666666666666666666666666666666
Q ss_pred CCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCccccccccc-CCCCC-ccEEEeecCccccccC
Q 008121 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSGLP-LTTLNVANNHFSGWIP 240 (577)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~L~l~~N~l~g~~p 240 (577)
|++++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++.++. +..++ |+.|++++|+|++..|
T Consensus 119 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 198 (272)
T 3rfs_A 119 NQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPD 198 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCH
Confidence 666666666666666666666666666655555556666666666666666665443 33333 6666666666666555
Q ss_pred ccc---ccccceeecCCcCCC
Q 008121 241 REL---ISIRTFIYDGNSFDN 258 (577)
Q Consensus 241 ~~l---~~l~~l~~~~n~~~~ 258 (577)
..+ .+++.|++++|++.|
T Consensus 199 ~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 199 GVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp TTTTTCTTCCEEECCSSCBCC
T ss_pred HHHhCCcCCCEEEccCCCccc
Confidence 433 345556666666543
No 274
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.85 E-value=2.6e-21 Score=185.45 Aligned_cols=151 Identities=24% Similarity=0.268 Sum_probs=127.8
Q ss_pred EEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCC---CCCccEEEccCCcCCCcCCCCccCCCCccEEEeccC
Q 008121 87 SIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQL---PPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRN 163 (577)
Q Consensus 87 ~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N 163 (577)
.+++++|+++. +|..+. ..++.|+|++|+|++..|... .++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 45666777764 565554 356899999999997666443 289999999999999888889999999999999999
Q ss_pred CCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccc-cCCCCC-ccEEEeecCccccccC
Q 008121 164 SLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSGLP-LTTLNVANNHFSGWIP 240 (577)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~L~l~~N~l~g~~p 240 (577)
+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++.++ .+..++ |+.|+|++|.+++..+
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 9999988889999999999999999998889999999999999999999999754 566665 9999999999987655
No 275
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.85 E-value=6.1e-21 Score=218.73 Aligned_cols=178 Identities=19% Similarity=0.206 Sum_probs=126.1
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEEe
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 160 (577)
.+++.|+|++|++++..|..|..+++|++|+|++|+|++..|..+. ++|++|+|++|++++..+..|..+++|++|+|
T Consensus 290 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 369 (844)
T 3j0a_A 290 KDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDL 369 (844)
T ss_dssp CCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEE
T ss_pred CCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEEC
Confidence 3566667777777666666667777777777777776655554443 56666666666666555555555555555555
Q ss_pred ccCCCccc------------------------------------------------------------------------
Q 008121 161 SRNSLTQS------------------------------------------------------------------------ 168 (577)
Q Consensus 161 ~~N~l~~~------------------------------------------------------------------------ 168 (577)
++|.+++.
T Consensus 370 s~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 449 (844)
T 3j0a_A 370 RDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSE 449 (844)
T ss_dssp ETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCS
T ss_pred CCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCccccccccccccc
Confidence 55554321
Q ss_pred ----------------------ccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccccCCCCCcc
Q 008121 169 ----------------------IGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLT 226 (577)
Q Consensus 169 ----------------------~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~ 226 (577)
.|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++.++......|+
T Consensus 450 ~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~ 529 (844)
T 3j0a_A 450 NPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLE 529 (844)
T ss_dssp CTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCC
T ss_pred CCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhhcccc
Confidence 1123555677777777777777777777888888999999999988876654445699
Q ss_pred EEEeecCccccccCcccccccceeecCCcCCCCC
Q 008121 227 TLNVANNHFSGWIPRELISIRTFIYDGNSFDNGP 260 (577)
Q Consensus 227 ~L~l~~N~l~g~~p~~l~~l~~l~~~~n~~~~~~ 260 (577)
.|+|++|+|++.+|..+.++..+++++|++.|..
T Consensus 530 ~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c 563 (844)
T 3j0a_A 530 ILDISRNQLLAPNPDVFVSLSVLDITHNKFICEC 563 (844)
T ss_dssp EEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSS
T ss_pred EEECCCCcCCCCChhHhCCcCEEEecCCCccccc
Confidence 9999999999999999999999999999998854
No 276
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.85 E-value=2.7e-21 Score=187.62 Aligned_cols=188 Identities=16% Similarity=0.224 Sum_probs=156.3
Q ss_pred CCCCCCC-cc--EEeeC--------CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCC-cCCcCCCCCC--CCccEE
Q 008121 69 DPCGESW-KG--VACEG--------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNS-IHDTIPYQLP--PNLTSL 134 (577)
Q Consensus 69 ~~c~~~w-~g--v~C~~--------~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~--~~L~~L 134 (577)
+.|.|.+ .+ |.|.. ..++.|+|++|++++..+..|.++++|++|+|++|+ +++..+..+. ++|++|
T Consensus 6 ~~C~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L 85 (239)
T 2xwt_C 6 PPCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHI 85 (239)
T ss_dssp SSCSEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEE
T ss_pred CCCeeCCCCcceeEccCccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEE
Confidence 4565543 54 55864 579999999999998888899999999999999997 8754444443 899999
Q ss_pred EccC-CcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCc---EEeCcCC-cccCCCCCCccCCCCCC-eEEc
Q 008121 135 NLAS-NNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLA---TLDLSFN-NFSGDLPNSFISLSNIS-SLYL 208 (577)
Q Consensus 135 ~l~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~g~~p~~~~~l~~L~-~L~l 208 (577)
+|++ |++++..+..|.++++|++|+|++|++++ +|. |..+++|+ +|+|++| ++++..+..|.++++|+ +|++
T Consensus 86 ~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l 163 (239)
T 2xwt_C 86 EIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKL 163 (239)
T ss_dssp EEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEEC
T ss_pred ECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEc
Confidence 9999 99998888899999999999999999997 666 88999998 9999999 99977777799999999 9999
Q ss_pred cCccccccccc-CCCCCccEEEeecCc-cccccCccc----ccccceeecCCcCCC
Q 008121 209 QNNQVTGSLNV-FSGLPLTTLNVANNH-FSGWIPREL----ISIRTFIYDGNSFDN 258 (577)
Q Consensus 209 ~~N~l~~~~~~-~~~~~L~~L~l~~N~-l~g~~p~~l----~~l~~l~~~~n~~~~ 258 (577)
++|+|+..++. +....|+.|++++|+ +++..+..+ .+++.|++++|.+..
T Consensus 164 ~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~ 219 (239)
T 2xwt_C 164 YNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA 219 (239)
T ss_dssp CSCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC
T ss_pred CCCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc
Confidence 99999965543 444459999999995 986555544 467788899998764
No 277
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.85 E-value=1.2e-20 Score=192.22 Aligned_cols=195 Identities=18% Similarity=0.239 Sum_probs=156.6
Q ss_pred CCCCCCCCCCCCCCCCccEEeeC-----------CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC
Q 008121 60 LTNWKGNEGDPCGESWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP 128 (577)
Q Consensus 60 l~~w~~~~~~~c~~~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 128 (577)
...|...-...|.|+|+.+.|+. ..++.|+|++|++++..+..|+++++|++|+|++|++++..|..+.
T Consensus 18 i~~~~~~cp~~c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 97 (330)
T 1xku_A 18 IEPMGPVCPFRCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFA 97 (330)
T ss_dssp ----CCCCCTTCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTT
T ss_pred cccccCCCCCCCcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhc
Confidence 34555433456777999999974 3688999999999998888999999999999999999987787776
Q ss_pred --CCccEEEccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCccc--CCCCCCccCCCCCC
Q 008121 129 --PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFS--GDLPNSFISLSNIS 204 (577)
Q Consensus 129 --~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--g~~p~~~~~l~~L~ 204 (577)
++|++|+|++|+++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+++ +..+..+.++++|+
T Consensus 98 ~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~ 174 (330)
T 1xku_A 98 PLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLS 174 (330)
T ss_dssp TCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCC
T ss_pred CCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcC
Confidence 89999999999998 5666654 78999999999999888888999999999999999985 36778888899999
Q ss_pred eEEccCcccccccccCCCCCccEEEeecCccccccCcccc---cccceeecCCcCCC
Q 008121 205 SLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPRELI---SIRTFIYDGNSFDN 258 (577)
Q Consensus 205 ~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~~p~~l~---~l~~l~~~~n~~~~ 258 (577)
+|++++|.++..+..+. ..|+.|++++|++++..|..+. +++.|++++|.+..
T Consensus 175 ~L~l~~n~l~~l~~~~~-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 230 (330)
T 1xku_A 175 YIRIADTNITTIPQGLP-PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 230 (330)
T ss_dssp EEECCSSCCCSCCSSCC-TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCE
T ss_pred EEECCCCccccCCcccc-ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCce
Confidence 99999999887554333 4588888888888877776554 55667788877643
No 278
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.85 E-value=5.6e-21 Score=204.86 Aligned_cols=187 Identities=17% Similarity=0.219 Sum_probs=160.7
Q ss_pred CCCC--CCccEEeeC-----------CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEE
Q 008121 70 PCGE--SWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSL 134 (577)
Q Consensus 70 ~c~~--~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L 134 (577)
.|.| .|..|.|.. ..++.|+|++|+|++..+..|.++++|++|+|++|+|++..|..+. ++|++|
T Consensus 6 ~C~C~~~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 85 (477)
T 2id5_A 6 RCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTL 85 (477)
T ss_dssp TCEEETTTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCeECCCCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEE
Confidence 4544 578899974 3678999999999999999999999999999999999987787775 899999
Q ss_pred EccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccc
Q 008121 135 NLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVT 214 (577)
Q Consensus 135 ~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 214 (577)
+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|+++
T Consensus 86 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 165 (477)
T 2id5_A 86 GLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLT 165 (477)
T ss_dssp ECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCS
T ss_pred ECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCc
Confidence 99999999877778999999999999999999999999999999999999999999888889999999999999999999
Q ss_pred cccc-cCCCCC-ccEEEeecCccccccCcccc---cccceeecCCcC
Q 008121 215 GSLN-VFSGLP-LTTLNVANNHFSGWIPRELI---SIRTFIYDGNSF 256 (577)
Q Consensus 215 ~~~~-~~~~~~-L~~L~l~~N~l~g~~p~~l~---~l~~l~~~~n~~ 256 (577)
+.++ .+..++ |+.|++++|.+++..+..+. +++.|++++|+.
T Consensus 166 ~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~ 212 (477)
T 2id5_A 166 SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPY 212 (477)
T ss_dssp SCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTT
T ss_pred ccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCcc
Confidence 8664 355554 88999999988876665444 456666776654
No 279
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.85 E-value=1e-20 Score=192.95 Aligned_cols=186 Identities=19% Similarity=0.266 Sum_probs=112.1
Q ss_pred CCCCCCCccEEeeC-----------CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEE
Q 008121 69 DPCGESWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLN 135 (577)
Q Consensus 69 ~~c~~~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ 135 (577)
..|.|+|..+.|+. ..++.|+|++|.+++..|..|.++++|++|+|++|+|++..|..+. ++|++|+
T Consensus 29 ~~c~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 29 FGCHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLY 108 (332)
T ss_dssp SSCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEE
T ss_pred CCCcccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEE
Confidence 45667899999974 2578888888888877777788888888888888887766565443 5666666
Q ss_pred ccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCccc--CCCCCCccCC-------------
Q 008121 136 LASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFS--GDLPNSFISL------------- 200 (577)
Q Consensus 136 l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--g~~p~~~~~l------------- 200 (577)
|++|+++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.++ +..|..+..+
T Consensus 109 L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 109 ISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLT 185 (332)
T ss_dssp CCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCS
T ss_pred CCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCC
Confidence 6666666 3444333 45555555555555544444555555555555555553 2333333322
Q ss_pred -------CCCCeEEccCcccccccc-cCCCCC-ccEEEeecCccccccCcccc---cccceeecCCcCC
Q 008121 201 -------SNISSLYLQNNQVTGSLN-VFSGLP-LTTLNVANNHFSGWIPRELI---SIRTFIYDGNSFD 257 (577)
Q Consensus 201 -------~~L~~L~l~~N~l~~~~~-~~~~~~-L~~L~l~~N~l~g~~p~~l~---~l~~l~~~~n~~~ 257 (577)
++|++|+|++|.+++..+ .+..++ |+.|++++|++++..|..+. +++.|++++|.+.
T Consensus 186 ~l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 254 (332)
T 2ft3_A 186 GIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS 254 (332)
T ss_dssp SCCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC
T ss_pred ccCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe
Confidence 345555555555555442 344443 66666777766665554333 4455666666654
No 280
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.84 E-value=8.7e-21 Score=182.90 Aligned_cols=157 Identities=24% Similarity=0.289 Sum_probs=128.7
Q ss_pred CCCCCCCCccEEeeCCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcC
Q 008121 68 GDPCGESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNL 145 (577)
Q Consensus 68 ~~~c~~~w~gv~C~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~ 145 (577)
.+.| +|++|.|+..+ +. .+|..+. ++|++|+|++|+|++..|..+. ++|++|+|++|+|++..
T Consensus 16 ~~~C--s~~~v~c~~~~----------l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~ 80 (229)
T 3e6j_A 16 QCSC--SGTTVDCRSKR----------HA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALP 80 (229)
T ss_dssp TCEE--ETTEEECTTSC----------CS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCEE--eCCEeEccCCC----------cC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcC
Confidence 4566 89999997543 33 4454443 7899999999999987776664 88999999999998776
Q ss_pred CCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccc-cCCCCC
Q 008121 146 PYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSGLP 224 (577)
Q Consensus 146 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~ 224 (577)
+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++.++ .+..++
T Consensus 81 ~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 159 (229)
T 3e6j_A 81 VGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLS 159 (229)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCC
Confidence 777889999999999999999888888889999999999999998 788889999999999999999998765 355554
Q ss_pred -ccEEEeecCccccccC
Q 008121 225 -LTTLNVANNHFSGWIP 240 (577)
Q Consensus 225 -L~~L~l~~N~l~g~~p 240 (577)
|+.|+|++|.+++..+
T Consensus 160 ~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 160 SLTHAYLFGNPWDCECR 176 (229)
T ss_dssp TCCEEECTTSCBCTTBG
T ss_pred CCCEEEeeCCCccCCcc
Confidence 8999999999987654
No 281
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.84 E-value=1.2e-20 Score=200.15 Aligned_cols=183 Identities=20% Similarity=0.202 Sum_probs=145.8
Q ss_pred CCccEEeeC-----------CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCc
Q 008121 74 SWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNN 140 (577)
Q Consensus 74 ~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~ 140 (577)
.|..|.|.. ..++.|+|++|++++..+..|.++++|++|+|++|+|++..|..+. ++|++|+|++|+
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 467899975 3578899999999999889999999999999999999976655554 899999999999
Q ss_pred CCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCC-cccCCCCCCccCCCCCCeEEccCccccccccc
Q 008121 141 FSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFN-NFSGDLPNSFISLSNISSLYLQNNQVTGSLNV 219 (577)
Q Consensus 141 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 219 (577)
|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++| .++...+..|.++++|++|+|++|+|+..+.
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~- 202 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPN- 202 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCCC-
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccccc-
Confidence 99877788999999999999999999888778888888888888884 4443334467888888888888888876543
Q ss_pred CCCC-CccEEEeecCccccccCcccc---cccceeecCCcCC
Q 008121 220 FSGL-PLTTLNVANNHFSGWIPRELI---SIRTFIYDGNSFD 257 (577)
Q Consensus 220 ~~~~-~L~~L~l~~N~l~g~~p~~l~---~l~~l~~~~n~~~ 257 (577)
+..+ .|+.|+|++|+|++..|..+. +++.|.+++|.+.
T Consensus 203 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 244 (440)
T 3zyj_A 203 LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ 244 (440)
T ss_dssp CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCcee
Confidence 4333 388888888888877676554 4556667777654
No 282
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.84 E-value=1.6e-21 Score=197.15 Aligned_cols=174 Identities=18% Similarity=0.166 Sum_probs=109.3
Q ss_pred CcEEEEEcCCCCCcccccccc--cCCCCCCEEEccCCCcCCcCCCCC-------CCCccEEEccCCcCCCcCCCCccCCC
Q 008121 83 SAVVSIDISGLGLSGTMGYLL--SDLLSLRKFDLSGNSIHDTIPYQL-------PPNLTSLNLASNNFSGNLPYSIASMV 153 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~--~~l~~L~~L~Ls~N~l~~~~p~~~-------~~~L~~L~l~~N~l~~~~p~~~~~l~ 153 (577)
.+++.|+|++|++++.+|..+ +.+++|++|+|++|+|++. |..+ .++|++|+|++|++++..|..|+.++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 356667777777777666655 6677777777777777654 4322 15677777777777766666777777
Q ss_pred CccEEEeccCCCccc--ccccc--cCCCCCcEEeCcCCcccC--CCC-CCccCCCCCCeEEccCcccccccc--cCCCC-
Q 008121 154 SLSYLNVSRNSLTQS--IGDIF--GNLAGLATLDLSFNNFSG--DLP-NSFISLSNISSLYLQNNQVTGSLN--VFSGL- 223 (577)
Q Consensus 154 ~L~~L~L~~N~l~~~--~p~~~--~~l~~L~~L~Ls~N~l~g--~~p-~~~~~l~~L~~L~l~~N~l~~~~~--~~~~~- 223 (577)
+|++|+|++|++.+. +|..+ .++++|++|+|++|+|++ .++ ..+..+++|++|+|++|+|++.++ .+..+
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~ 253 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPS 253 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCT
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcC
Confidence 777777777776654 23333 666777777777777762 122 223456677777777777776542 23333
Q ss_pred CccEEEeecCccccccCcccc-cccceeecCCcCCC
Q 008121 224 PLTTLNVANNHFSGWIPRELI-SIRTFIYDGNSFDN 258 (577)
Q Consensus 224 ~L~~L~l~~N~l~g~~p~~l~-~l~~l~~~~n~~~~ 258 (577)
.|+.|+|++|+|+ .+|..+. +++.|++++|.+..
T Consensus 254 ~L~~L~Ls~N~l~-~ip~~~~~~L~~L~Ls~N~l~~ 288 (312)
T 1wwl_A 254 QLNSLNLSFTGLK-QVPKGLPAKLSVLDLSYNRLDR 288 (312)
T ss_dssp TCCEEECTTSCCS-SCCSSCCSEEEEEECCSSCCCS
T ss_pred CCCEEECCCCccC-hhhhhccCCceEEECCCCCCCC
Confidence 3777777777776 6665554 56666777776643
No 283
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.84 E-value=2.9e-21 Score=180.96 Aligned_cols=169 Identities=20% Similarity=0.250 Sum_probs=120.9
Q ss_pred EEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCC-CC--CCccEEEccCCcCCCcCCCCccCCCCccEEEeccC
Q 008121 87 SIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQ-LP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRN 163 (577)
Q Consensus 87 ~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N 163 (577)
.|++++|+|+ .+|..+.. +|+.|+|++|+|++..|.. +. ++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 12 ~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 4556677774 56665544 8899999999998655543 32 88999999999999888888999999999999999
Q ss_pred CCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccccCCCCC-ccEEEeecCccccccCcc
Q 008121 164 SLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP-LTTLNVANNHFSGWIPRE 242 (577)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~L~l~~N~l~g~~p~~ 242 (577)
+|++..|..|.++++|++|+|++|+|++.+|..|..+++|++|+|++|.+++..+...... ++...+..+......|..
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~~ 168 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSK 168 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSSTT
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCChH
Confidence 9998888888889999999999999998888888888999999999998887543111000 222223334444444555
Q ss_pred cccccceeecCCcCCC
Q 008121 243 LISIRTFIYDGNSFDN 258 (577)
Q Consensus 243 l~~l~~l~~~~n~~~~ 258 (577)
+....-.++..+.+.|
T Consensus 169 l~~~~l~~l~~~~~~C 184 (192)
T 1w8a_A 169 VRDVQIKDLPHSEFKC 184 (192)
T ss_dssp TTTSBGGGSCTTTCCC
T ss_pred HcCCChhhCcHhhcCc
Confidence 5544444444444443
No 284
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.84 E-value=7.3e-21 Score=202.53 Aligned_cols=171 Identities=19% Similarity=0.187 Sum_probs=142.7
Q ss_pred CCCCCCCccEEeeC----------CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCC-CCC--CCccEEE
Q 008121 69 DPCGESWKGVACEG----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPY-QLP--PNLTSLN 135 (577)
Q Consensus 69 ~~c~~~w~gv~C~~----------~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~--~~L~~L~ 135 (577)
+.|.|.+..|.|+. .+++.|+|++|.+++..|..|+++++|++|+|++|.+.+.+|. .+. ++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 34533444599975 3589999999999999999999999999999999999877754 343 8999999
Q ss_pred ccCCcCCCcCCCCccCCCCccEEEeccCCCccccccc--ccCCCCCcEEeCcCCcccCCCCCC-ccCCCCCCeEEccCcc
Q 008121 136 LASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDI--FGNLAGLATLDLSFNNFSGDLPNS-FISLSNISSLYLQNNQ 212 (577)
Q Consensus 136 l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L~l~~N~ 212 (577)
|++|++++..|..|+++++|++|+|++|++++.+|.. |.++++|++|+|++|++++..|.. +.++++|++|+|++|+
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 9999999999999999999999999999999876665 999999999999999999887876 8899999999999999
Q ss_pred ccccccc-CCC---CCccEEEeecCcccccc
Q 008121 213 VTGSLNV-FSG---LPLTTLNVANNHFSGWI 239 (577)
Q Consensus 213 l~~~~~~-~~~---~~L~~L~l~~N~l~g~~ 239 (577)
+++..+. +.. ..++.|++++|.+++..
T Consensus 166 l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~ 196 (455)
T 3v47_A 166 VKSICEEDLLNFQGKHFTLLRLSSITLQDMN 196 (455)
T ss_dssp BSCCCTTTSGGGTTCEEEEEECTTCBCTTCS
T ss_pred ccccChhhhhccccccccccccccCcccccc
Confidence 9986542 322 23566666666666433
No 285
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.84 E-value=4e-21 Score=197.75 Aligned_cols=185 Identities=18% Similarity=0.245 Sum_probs=155.9
Q ss_pred CCCCccEEeeC-------------CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEc
Q 008121 72 GESWKGVACEG-------------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNL 136 (577)
Q Consensus 72 ~~~w~gv~C~~-------------~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l 136 (577)
.|.|.|+ |+. .+++.|+|++|++++..+..|.++++|++|+|++|+|++..|..+. ++|++|+|
T Consensus 29 ~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 29 SCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp EECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 3389887 752 3689999999999988777999999999999999999987776665 89999999
Q ss_pred cCCcCCCcCCCCccCCCCccEEEeccCCCccccc-ccccCCCCCcEEeCcCC-cccCCCCCCccCCCCCCeEEccCcccc
Q 008121 137 ASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIG-DIFGNLAGLATLDLSFN-NFSGDLPNSFISLSNISSLYLQNNQVT 214 (577)
Q Consensus 137 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N-~l~g~~p~~~~~l~~L~~L~l~~N~l~ 214 (577)
++|++++..+..|+++++|++|+|++|++++..+ ..|.++++|++|+|++| .+++..|..|.++++|++|++++|+++
T Consensus 108 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~ 187 (353)
T 2z80_A 108 SYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQ 187 (353)
T ss_dssp CSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcC
Confidence 9999997666668999999999999999996555 57899999999999999 577666788999999999999999999
Q ss_pred cccc-cCCCCC-ccEEEeecCccccccCcc----cccccceeecCCcCCC
Q 008121 215 GSLN-VFSGLP-LTTLNVANNHFSGWIPRE----LISIRTFIYDGNSFDN 258 (577)
Q Consensus 215 ~~~~-~~~~~~-L~~L~l~~N~l~g~~p~~----l~~l~~l~~~~n~~~~ 258 (577)
+..+ .+..++ |+.|++++|+++ .+|.. +.+++.|++++|.+..
T Consensus 188 ~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~ 236 (353)
T 2z80_A 188 SYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDT 236 (353)
T ss_dssp EECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTT
T ss_pred ccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCcccc
Confidence 8754 566665 999999999996 45542 4578889999998764
No 286
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.84 E-value=2.9e-20 Score=184.16 Aligned_cols=170 Identities=25% Similarity=0.300 Sum_probs=147.6
Q ss_pred CCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEE
Q 008121 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (577)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 159 (577)
...++.|+|++|.+++. +.++.+++|++|+|++|+|++..|..+. ++|++|+|++|++++..+..|+.+++|++|+
T Consensus 62 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp CTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 46899999999999874 4899999999999999999976665443 8999999999999988888899999999999
Q ss_pred eccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCccccccccc-CCCCC-ccEEEeecCcccc
Q 008121 160 VSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSGLP-LTTLNVANNHFSG 237 (577)
Q Consensus 160 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~L~l~~N~l~g 237 (577)
|++|++++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++.++. +..++ |+.|++++|.+.+
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 999999998888899999999999999999987777789999999999999999997764 55555 9999999999998
Q ss_pred ccCcccccccceeecCCcCC
Q 008121 238 WIPRELISIRTFIYDGNSFD 257 (577)
Q Consensus 238 ~~p~~l~~l~~l~~~~n~~~ 257 (577)
..| ++..+.+..|.+.
T Consensus 220 ~~~----~l~~l~~~~n~~~ 235 (272)
T 3rfs_A 220 TCP----GIRYLSEWINKHS 235 (272)
T ss_dssp CTT----TTHHHHHHHHHTG
T ss_pred cCc----HHHHHHHHHHhCC
Confidence 776 3445555555554
No 287
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.83 E-value=8.9e-21 Score=195.77 Aligned_cols=170 Identities=23% Similarity=0.244 Sum_probs=137.7
Q ss_pred EEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCC---CCCccEEEccCCcCCCcCCCCccCCCCccEEEeccC
Q 008121 87 SIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQL---PPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRN 163 (577)
Q Consensus 87 ~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N 163 (577)
.+++++++|+. +|..+. ..|+.|+|++|+|++..+..+ .++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 45667777774 555544 358899999999997655544 288999999999999888888999999999999999
Q ss_pred CCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCccccccccc-C---CCCC-ccEEEeecCccccc
Q 008121 164 SLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-F---SGLP-LTTLNVANNHFSGW 238 (577)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~---~~~~-L~~L~l~~N~l~g~ 238 (577)
+|++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++.+.. + ..++ |+.|+|++|+|++.
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 99988888899999999999999999988888999999999999999999987654 3 2343 99999999999954
Q ss_pred cCcccccc-----cceeecCCcCCCC
Q 008121 239 IPRELISI-----RTFIYDGNSFDNG 259 (577)
Q Consensus 239 ~p~~l~~l-----~~l~~~~n~~~~~ 259 (577)
.+..+..+ ..|.+.+|++.|.
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred CHHHhhhccHhhcceEEecCCCccCC
Confidence 44555544 5688999998864
No 288
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.83 E-value=1.2e-20 Score=207.89 Aligned_cols=132 Identities=20% Similarity=0.251 Sum_probs=99.0
Q ss_pred cEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEEec
Q 008121 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (577)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (577)
.++.|++++|.+....+..|..+++|++|+|++|.|++..|..+. ++|++|+|++|.|++..|..|+++++|++|+|+
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 131 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 131 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEee
Confidence 456677777777766666677778888888888887766655554 678888888888877777777778888888888
Q ss_pred cCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCccccc
Q 008121 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTG 215 (577)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 215 (577)
+|.|++..+..|+++++|++|+|++|+|++..|..|+.+++|++|+|++|.|++
T Consensus 132 ~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 132 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred CCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 888876666667777888888888888877777777777777777777777765
No 289
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.83 E-value=3.2e-20 Score=197.51 Aligned_cols=106 Identities=19% Similarity=0.339 Sum_probs=79.7
Q ss_pred CCccEEEeccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccc-cCCCCC-ccEEEe
Q 008121 153 VSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSGLP-LTTLNV 230 (577)
Q Consensus 153 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~L~l 230 (577)
++|++|+|++|++++.+|..|.++++|++|+|++|++++..|..|..+++|++|+|++|.|++.++ .+..++ |+.|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 356666666667777778888888888888888888887777788888888888888888877654 455554 888888
Q ss_pred ecCccccccCcccc---cccceeecCCcCCC
Q 008121 231 ANNHFSGWIPRELI---SIRTFIYDGNSFDN 258 (577)
Q Consensus 231 ~~N~l~g~~p~~l~---~l~~l~~~~n~~~~ 258 (577)
++|++++..|..+. +++.|++++|.+..
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 385 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKS 385 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCcccccChhhccccccccEEECCCCcccc
Confidence 88888877776554 55667788887754
No 290
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=6.1e-20 Score=175.83 Aligned_cols=149 Identities=21% Similarity=0.254 Sum_probs=126.1
Q ss_pred CCCCCCCccEEeeCC-----------cEEEEEcCCCCCccccc-ccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEE
Q 008121 69 DPCGESWKGVACEGS-----------AVVSIDISGLGLSGTMG-YLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSL 134 (577)
Q Consensus 69 ~~c~~~w~gv~C~~~-----------~v~~l~l~~~~l~g~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L 134 (577)
..|.|.|..+.|+.. .++.|+|++|+|++..+ ..|..+++|++|+|++|+|++..|..+. ++|++|
T Consensus 7 ~~C~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L 86 (220)
T 2v70_A 7 EKCRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEI 86 (220)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCCEECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEE
Confidence 567778888998642 46788999999988765 4588899999999999999876665554 889999
Q ss_pred EccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccc
Q 008121 135 NLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVT 214 (577)
Q Consensus 135 ~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 214 (577)
+|++|+|++..|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+.
T Consensus 87 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 87 LLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp ECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred ECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 99999999888888889999999999999999888888999999999999999999888888999999999999999888
Q ss_pred ccc
Q 008121 215 GSL 217 (577)
Q Consensus 215 ~~~ 217 (577)
+..
T Consensus 167 c~c 169 (220)
T 2v70_A 167 CNC 169 (220)
T ss_dssp CSG
T ss_pred CCC
Confidence 643
No 291
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.83 E-value=1.2e-20 Score=208.36 Aligned_cols=190 Identities=23% Similarity=0.218 Sum_probs=160.9
Q ss_pred CCCCCCC--CccEEeeC-----------CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCcc
Q 008121 68 GDPCGES--WKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLT 132 (577)
Q Consensus 68 ~~~c~~~--w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~ 132 (577)
.+||.+. -..|.|.. .+++.|+|++|++++..+..|+++++|++|+|++|+|++..|..+. ++|+
T Consensus 4 ~~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~ 83 (606)
T 3vq2_A 4 LNPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLS 83 (606)
T ss_dssp --CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCC
T ss_pred CCCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcC
Confidence 3567432 23588864 4689999999999999999999999999999999999987777665 8999
Q ss_pred EEEccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcccC-CCCCCccCCCCCCeEEccCc
Q 008121 133 SLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSG-DLPNSFISLSNISSLYLQNN 211 (577)
Q Consensus 133 ~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~l~~N 211 (577)
+|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++ .+|..|+++++|++|+|++|
T Consensus 84 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n 163 (606)
T 3vq2_A 84 NLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYN 163 (606)
T ss_dssp EEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSS
T ss_pred EeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCC
Confidence 99999999999999999999999999999999999888899999999999999999986 67999999999999999999
Q ss_pred cccccccc-CCCCC-----ccEEEeecCccccccCcccc--cccceeecCCcCC
Q 008121 212 QVTGSLNV-FSGLP-----LTTLNVANNHFSGWIPRELI--SIRTFIYDGNSFD 257 (577)
Q Consensus 212 ~l~~~~~~-~~~~~-----L~~L~l~~N~l~g~~p~~l~--~l~~l~~~~n~~~ 257 (577)
++++.++. +..+. +..|++++|.+++..+..+. +++.+++++|.+.
T Consensus 164 ~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~ 217 (606)
T 3vq2_A 164 YIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNS 217 (606)
T ss_dssp CCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSC
T ss_pred cceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCccc
Confidence 99986543 33322 55899999999866555443 5677888888653
No 292
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.83 E-value=2.9e-20 Score=208.23 Aligned_cols=175 Identities=23% Similarity=0.295 Sum_probs=152.8
Q ss_pred CCCCCCccEEeeC-----------CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEc
Q 008121 70 PCGESWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNL 136 (577)
Q Consensus 70 ~c~~~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l 136 (577)
+|.|.+..|.|.. .+++.|+|++|++++..+..|+++++|++|+|++|++++..|..+. ++|++|+|
T Consensus 1 ~C~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 80 (680)
T 1ziw_A 1 KCTVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNL 80 (680)
T ss_dssp ---CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEEC
T ss_pred CceeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEEC
Confidence 3655677788863 4799999999999998888999999999999999999987776654 89999999
Q ss_pred cCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccc
Q 008121 137 ASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGS 216 (577)
Q Consensus 137 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~ 216 (577)
++|++++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..++++++|++|++++|.+++.
T Consensus 81 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 160 (680)
T 1ziw_A 81 QHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQAL 160 (680)
T ss_dssp CSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCB
T ss_pred CCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCccccc
Confidence 99999977677899999999999999999998889999999999999999999999999999999999999999999987
Q ss_pred ccc-C---CCCCccEEEeecCccccccCcccc
Q 008121 217 LNV-F---SGLPLTTLNVANNHFSGWIPRELI 244 (577)
Q Consensus 217 ~~~-~---~~~~L~~L~l~~N~l~g~~p~~l~ 244 (577)
++. + ....|+.|++++|++++..|..+.
T Consensus 161 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~ 192 (680)
T 1ziw_A 161 KSEELDIFANSSLKKLELSSNQIKEFSPGCFH 192 (680)
T ss_dssp CHHHHGGGTTCEESEEECTTCCCCCBCTTGGG
T ss_pred CHHHhhccccccccEEECCCCcccccChhhhh
Confidence 653 2 223499999999999988886554
No 293
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.83 E-value=7.8e-21 Score=192.14 Aligned_cols=174 Identities=20% Similarity=0.249 Sum_probs=145.9
Q ss_pred eCCcEEEEEcCCCCCcccccccccCC-----CCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCc--CCCCc--
Q 008121 81 EGSAVVSIDISGLGLSGTMGYLLSDL-----LSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGN--LPYSI-- 149 (577)
Q Consensus 81 ~~~~v~~l~l~~~~l~g~~~~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~--~p~~~-- 149 (577)
....++.|+|++|++++. |..++.+ ++|++|+|++|+|++..|..+. ++|++|+|++|++.+. +|..+
T Consensus 119 ~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 197 (312)
T 1wwl_A 119 TGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCP 197 (312)
T ss_dssp CSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCT
T ss_pred cCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHh
Confidence 456899999999999988 8888887 9999999999999987777775 8999999999999876 34444
Q ss_pred cCCCCccEEEeccCCCcc---cccccccCCCCCcEEeCcCCcccCCCC-CCccCCCCCCeEEccCcccccccccCCCCCc
Q 008121 150 ASMVSLSYLNVSRNSLTQ---SIGDIFGNLAGLATLDLSFNNFSGDLP-NSFISLSNISSLYLQNNQVTGSLNVFSGLPL 225 (577)
Q Consensus 150 ~~l~~L~~L~L~~N~l~~---~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L 225 (577)
+.+++|++|+|++|+|++ .....+.++++|++|+|++|+|++.+| ..+..+++|++|+|++|+|+..+..+. ..|
T Consensus 198 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~-~~L 276 (312)
T 1wwl_A 198 LKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPKGLP-AKL 276 (312)
T ss_dssp TSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSSCCSSCC-SEE
T ss_pred ccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccChhhhhcc-CCc
Confidence 899999999999999994 223456789999999999999998776 456778999999999999996555554 559
Q ss_pred cEEEeecCccccccCc--ccccccceeecCCcCC
Q 008121 226 TTLNVANNHFSGWIPR--ELISIRTFIYDGNSFD 257 (577)
Q Consensus 226 ~~L~l~~N~l~g~~p~--~l~~l~~l~~~~n~~~ 257 (577)
+.|||++|+|++. |. .+.+++.|++++|++.
T Consensus 277 ~~L~Ls~N~l~~~-p~~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 277 SVLDLSYNRLDRN-PSPDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp EEEECCSSCCCSC-CCTTTSCEEEEEECTTCTTT
T ss_pred eEEECCCCCCCCC-hhHhhCCCCCEEeccCCCCC
Confidence 9999999999976 64 3446677889999875
No 294
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.83 E-value=1.8e-20 Score=189.26 Aligned_cols=174 Identities=18% Similarity=0.200 Sum_probs=139.6
Q ss_pred cEEEEEcCCCCCcccccccc--cCCCCCCEEEccCCCcCCcCCC------CCCCCccEEEccCCcCCCcCCCCccCCCCc
Q 008121 84 AVVSIDISGLGLSGTMGYLL--SDLLSLRKFDLSGNSIHDTIPY------QLPPNLTSLNLASNNFSGNLPYSIASMVSL 155 (577)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~~--~~l~~L~~L~Ls~N~l~~~~p~------~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L 155 (577)
+++.|+|++|.+++..|..+ +.+++|++|+|++|++++..|. ...++|++|+|++|++++..|..|+.+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 58999999999999999888 8999999999999999976551 123899999999999998888999999999
Q ss_pred cEEEeccCCCccc--cc--ccccCCCCCcEEeCcCCcccCCCCC----CccCCCCCCeEEccCccccccc-ccCCCC---
Q 008121 156 SYLNVSRNSLTQS--IG--DIFGNLAGLATLDLSFNNFSGDLPN----SFISLSNISSLYLQNNQVTGSL-NVFSGL--- 223 (577)
Q Consensus 156 ~~L~L~~N~l~~~--~p--~~~~~l~~L~~L~Ls~N~l~g~~p~----~~~~l~~L~~L~l~~N~l~~~~-~~~~~~--- 223 (577)
++|+|++|++.+. ++ ..+..+++|++|+|++|+|+ .+|. .+..+++|++|+|++|+|++.. +.+...
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 9999999998763 22 33478889999999999887 3443 2467788999999999998873 333333
Q ss_pred -CccEEEeecCccccccCccc-ccccceeecCCcCCCC
Q 008121 224 -PLTTLNVANNHFSGWIPREL-ISIRTFIYDGNSFDNG 259 (577)
Q Consensus 224 -~L~~L~l~~N~l~g~~p~~l-~~l~~l~~~~n~~~~~ 259 (577)
.|+.|+|++|+|+ .+|..+ .+++.|++++|.+..-
T Consensus 251 ~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l~~~ 287 (310)
T 4glp_A 251 SALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRLNRA 287 (310)
T ss_dssp TTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCCCSC
T ss_pred CcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcCCCC
Confidence 4889999999998 667654 4778888888887643
No 295
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.83 E-value=1.2e-20 Score=205.90 Aligned_cols=183 Identities=20% Similarity=0.256 Sum_probs=153.9
Q ss_pred CCccEEeeC-------------CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccC
Q 008121 74 SWKGVACEG-------------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLAS 138 (577)
Q Consensus 74 ~w~gv~C~~-------------~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~ 138 (577)
.|.|+ |+. ..++.|+|++|++++..|..|+++++|++|+|++|+|++..|..+. ++|++|+|++
T Consensus 5 ~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~ 83 (549)
T 2z81_A 5 DASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSD 83 (549)
T ss_dssp CTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred CCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCC
Confidence 89998 874 2689999999999998889999999999999999999987776665 8999999999
Q ss_pred CcCCCcCCCCccCCCCccEEEeccCCCcc-cccccccCCCCCcEEeCcCCcccCCCC-CCccCCCCCCeEEccCcccccc
Q 008121 139 NNFSGNLPYSIASMVSLSYLNVSRNSLTQ-SIGDIFGNLAGLATLDLSFNNFSGDLP-NSFISLSNISSLYLQNNQVTGS 216 (577)
Q Consensus 139 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~ 216 (577)
|++++..|..|+++++|++|+|++|++++ .+|..++++++|++|+|++|++.+.+| ..|.++++|++|++++|++++.
T Consensus 84 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 163 (549)
T 2z81_A 84 NHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNY 163 (549)
T ss_dssp SCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEE
T ss_pred CccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccccc
Confidence 99998888889999999999999999997 467789999999999999998555565 6799999999999999999986
Q ss_pred cc-cCCCCC-ccEEEeecCccccccCcc----cccccceeecCCcCCC
Q 008121 217 LN-VFSGLP-LTTLNVANNHFSGWIPRE----LISIRTFIYDGNSFDN 258 (577)
Q Consensus 217 ~~-~~~~~~-L~~L~l~~N~l~g~~p~~----l~~l~~l~~~~n~~~~ 258 (577)
++ .+..++ |+.|++++|.+. .+|.. +.+++.|++++|.+..
T Consensus 164 ~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 164 QSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLAR 210 (549)
T ss_dssp CTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTT
T ss_pred ChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCcccc
Confidence 54 455555 888888888876 44433 4577888888888764
No 296
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.83 E-value=2.9e-20 Score=193.94 Aligned_cols=134 Identities=20% Similarity=0.247 Sum_probs=108.9
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEEe
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 160 (577)
..++.|+++++.++...+..|..+++|++|+|++|++++..|..+. ++|++|+|++|++++..|..|+++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 3567788888888766656678888888889988888866555554 78888888888888888888888888888888
Q ss_pred ccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccc
Q 008121 161 SRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGS 216 (577)
Q Consensus 161 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~ 216 (577)
++|+++...+..|.++++|++|+|++|++++..|..|..+++|++|++++|++++.
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 180 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 180 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc
Confidence 88888866666678888888888888888877777788888888888888888753
No 297
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=2.1e-20 Score=202.98 Aligned_cols=161 Identities=24% Similarity=0.376 Sum_probs=112.2
Q ss_pred CCCCCCCCCCCCCC---CCccE-EeeCCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEE
Q 008121 60 LTNWKGNEGDPCGE---SWKGV-ACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLN 135 (577)
Q Consensus 60 l~~w~~~~~~~c~~---~w~gv-~C~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ 135 (577)
+.+|.. +.+||.. .|.|+ .|...+++.|+|++|+|++ +|..+. ++|+.|+|++|+|+ .+| .+.++|++|+
T Consensus 33 l~~W~~-~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip-~~l~~L~~L~ 106 (571)
T 3cvr_A 33 WDKWEK-QALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP-ELPASLEYLD 106 (571)
T ss_dssp HHHHHT-TCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC-CCCTTCCEEE
T ss_pred HHHHhc-cCCccccccchhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc-cccCCCCEEE
Confidence 345764 4678854 59999 8988899999999999987 666553 78888888888888 677 6668888888
Q ss_pred ccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCccccc
Q 008121 136 LASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTG 215 (577)
Q Consensus 136 l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 215 (577)
|++|+|++ +|. |.+ +|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|++|+|++
T Consensus 107 Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~ 174 (571)
T 3cvr_A 107 ACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF 174 (571)
T ss_dssp CCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC
T ss_pred ccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC
Confidence 88888886 666 554 77777777777776 444 46667777777777664 554 35566666666666666
Q ss_pred ccccCCCCCccEEEeecCccccccCc
Q 008121 216 SLNVFSGLPLTTLNVANNHFSGWIPR 241 (577)
Q Consensus 216 ~~~~~~~~~L~~L~l~~N~l~g~~p~ 241 (577)
.+. +. ..|+.|+|++|+|+ .+|.
T Consensus 175 lp~-l~-~~L~~L~Ls~N~L~-~lp~ 197 (571)
T 3cvr_A 175 LPE-LP-ESLEALDVSTNLLE-SLPA 197 (571)
T ss_dssp CCC-CC-TTCCEEECCSSCCS-SCCC
T ss_pred cch-hh-CCCCEEECcCCCCC-chhh
Confidence 333 33 33555555555555 4444
No 298
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.82 E-value=8.4e-20 Score=193.68 Aligned_cols=172 Identities=19% Similarity=0.226 Sum_probs=108.2
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEEe
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 160 (577)
.+++.|+|++|+|++..+..|.++++|++|+|++|+|++..+..+. ++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 88 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l 167 (440)
T 3zyj_A 88 RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL 167 (440)
T ss_dssp SSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCC
Confidence 5788999999999988888899999999999999999854444443 78889999988888766667777777777777
Q ss_pred ccCC-CcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccc-cCCCCC-ccEEEeecCcccc
Q 008121 161 SRNS-LTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSGLP-LTTLNVANNHFSG 237 (577)
Q Consensus 161 ~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~L~l~~N~l~g 237 (577)
++|+ ++...+..|.++++|++|+|++|+|+ .+| .+..+++|++|+|++|+|++..+ .+..++ |+.|+|++|+|++
T Consensus 168 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 245 (440)
T 3zyj_A 168 GELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQV 245 (440)
T ss_dssp CCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred CCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeE
Confidence 7643 33333335666666666666666655 344 24555555555555555555432 233332 4555555555544
Q ss_pred ccCcccc---cccceeecCCcC
Q 008121 238 WIPRELI---SIRTFIYDGNSF 256 (577)
Q Consensus 238 ~~p~~l~---~l~~l~~~~n~~ 256 (577)
..|..+. +++.|++++|.+
T Consensus 246 ~~~~~~~~l~~L~~L~L~~N~l 267 (440)
T 3zyj_A 246 IERNAFDNLQSLVEINLAHNNL 267 (440)
T ss_dssp ECTTSSTTCTTCCEEECTTSCC
T ss_pred EChhhhcCCCCCCEEECCCCCC
Confidence 4443322 333444444443
No 299
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.82 E-value=5.8e-21 Score=211.95 Aligned_cols=174 Identities=16% Similarity=0.316 Sum_probs=158.0
Q ss_pred eCCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCC-cCC-cCCCCCC--------CCccEEEccCCcCCCcCCC--C
Q 008121 81 EGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNS-IHD-TIPYQLP--------PNLTSLNLASNNFSGNLPY--S 148 (577)
Q Consensus 81 ~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~--------~~L~~L~l~~N~l~~~~p~--~ 148 (577)
...+++.|+|++|++.|.+|..|+++++|++|+|++|+ |+| .+|..+. ++|++|+|++|+++ .+|. .
T Consensus 247 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~ 325 (636)
T 4eco_A 247 NLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETS 325 (636)
T ss_dssp GCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHH
T ss_pred ccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhh
Confidence 34689999999999999999999999999999999999 998 8886653 79999999999999 8998 9
Q ss_pred ccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCC-CCeEEccCcccccccccCCCC---C
Q 008121 149 IASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSN-ISSLYLQNNQVTGSLNVFSGL---P 224 (577)
Q Consensus 149 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~-L~~L~l~~N~l~~~~~~~~~~---~ 224 (577)
|+++++|++|+|++|+++|.+| .|+++++|++|+|++|+++ .+|..+..+++ |++|+|++|+|+..+..+... .
T Consensus 326 l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~~lp~~~~~~~l~~ 403 (636)
T 4eco_A 326 LQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSV 403 (636)
T ss_dssp HTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCSSCCSCCCTTCSSC
T ss_pred hccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCcccchhhhhcccCc
Confidence 9999999999999999999999 8999999999999999999 89999999999 999999999999665555544 4
Q ss_pred ccEEEeecCccccccCcccc----------cccceeecCCcCC
Q 008121 225 LTTLNVANNHFSGWIPRELI----------SIRTFIYDGNSFD 257 (577)
Q Consensus 225 L~~L~l~~N~l~g~~p~~l~----------~l~~l~~~~n~~~ 257 (577)
|+.|++++|++++.+|..+. +++.|++++|.+.
T Consensus 404 L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~ 446 (636)
T 4eco_A 404 MSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS 446 (636)
T ss_dssp EEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC
T ss_pred cCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccC
Confidence 99999999999999998776 6778889999876
No 300
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=1.9e-19 Score=172.42 Aligned_cols=149 Identities=23% Similarity=0.297 Sum_probs=129.7
Q ss_pred CEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcc
Q 008121 110 RKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNF 189 (577)
Q Consensus 110 ~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 189 (577)
+.+++++|+++ .+|..++++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l 92 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 92 (220)
T ss_dssp TEEECTTSCCS-SCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCC
T ss_pred CEEEcCCCCcC-cCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcC
Confidence 57899999998 68888889999999999999988888999999999999999999999999999999999999999999
Q ss_pred cCCCCCCccCCCCCCeEEccCcccccccc-cCCCCC-ccEEEeecCccccccCcccc---cccceeecCCcCCCC
Q 008121 190 SGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSGLP-LTTLNVANNHFSGWIPRELI---SIRTFIYDGNSFDNG 259 (577)
Q Consensus 190 ~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~L~l~~N~l~g~~p~~l~---~l~~l~~~~n~~~~~ 259 (577)
+...+..|..+++|++|+|++|+|++..+ .+..++ |+.|+|++|+|++..+..+. +++.+++++|++.|.
T Consensus 93 ~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 93 TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 96555567889999999999999998765 466665 99999999999977766554 567788999999763
No 301
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.82 E-value=4.9e-20 Score=203.50 Aligned_cols=174 Identities=25% Similarity=0.265 Sum_probs=100.0
Q ss_pred CcEEEEEcCCCCCccc--ccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCC-CCccCCCCccE
Q 008121 83 SAVVSIDISGLGLSGT--MGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLP-YSIASMVSLSY 157 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~--~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~ 157 (577)
..++.|+|++|.+++. +|..+..+++|++|+|++|.+++ +|..+. ++|++|+|++|++++..| ..|..+++|++
T Consensus 350 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 428 (606)
T 3vq2_A 350 PSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLY 428 (606)
T ss_dssp TTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCE
T ss_pred CCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCE
Confidence 4566777777776655 25566666666666666666653 443333 556666666666665555 45556666666
Q ss_pred EEeccCCCcccccccccCCCCCcEEeCcCCcccC-CCCCCccCCCCCCeEEccCcccccccc-cCCCCC-ccEEEeecCc
Q 008121 158 LNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSG-DLPNSFISLSNISSLYLQNNQVTGSLN-VFSGLP-LTTLNVANNH 234 (577)
Q Consensus 158 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~L~l~~N~ 234 (577)
|+|++|++++.+|..+.++++|++|+|++|++++ .+|..|..+++|++|+|++|++++.++ .+..++ |+.|++++|+
T Consensus 429 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 508 (606)
T 3vq2_A 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNN 508 (606)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCc
Confidence 6666666666555556666666666666666655 245555566666666666666655443 243333 5666666666
Q ss_pred cccccCcccc---cccceeecCCcCC
Q 008121 235 FSGWIPRELI---SIRTFIYDGNSFD 257 (577)
Q Consensus 235 l~g~~p~~l~---~l~~l~~~~n~~~ 257 (577)
+++.+|..+. +++.|++++|.+.
T Consensus 509 l~~~~~~~~~~l~~L~~L~l~~N~l~ 534 (606)
T 3vq2_A 509 LLFLDSSHYNQLYSLSTLDCSFNRIE 534 (606)
T ss_dssp CSCEEGGGTTTCTTCCEEECTTSCCC
T ss_pred CCCcCHHHccCCCcCCEEECCCCcCc
Confidence 6655555443 3445555555543
No 302
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.82 E-value=1.1e-19 Score=193.56 Aligned_cols=173 Identities=20% Similarity=0.210 Sum_probs=116.5
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEEe
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 160 (577)
.+++.|+|++|+|++..+..|.++++|++|+|++|+|++..+..+. ++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 99 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 178 (452)
T 3zyi_A 99 HHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDL 178 (452)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeC
Confidence 5789999999999998889999999999999999999965544443 88999999999998776667777777777777
Q ss_pred ccC-CCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccc-cCCCCC-ccEEEeecCcccc
Q 008121 161 SRN-SLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSGLP-LTTLNVANNHFSG 237 (577)
Q Consensus 161 ~~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~L~l~~N~l~g 237 (577)
++| .+....+..|.++++|++|+|++|+|++ +| .+..+++|++|+|++|+|++..+ .+..++ |+.|+|++|+|++
T Consensus 179 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 256 (452)
T 3zyi_A 179 GELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL 256 (452)
T ss_dssp CCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCE
T ss_pred CCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCce
Confidence 773 3333333456666666666666666663 34 35556666666666666665433 344333 5555555555555
Q ss_pred ccCcccc---cccceeecCCcCC
Q 008121 238 WIPRELI---SIRTFIYDGNSFD 257 (577)
Q Consensus 238 ~~p~~l~---~l~~l~~~~n~~~ 257 (577)
..|..+. +++.|++++|.+.
T Consensus 257 ~~~~~~~~l~~L~~L~L~~N~l~ 279 (452)
T 3zyi_A 257 IERNAFDGLASLVELNLAHNNLS 279 (452)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCS
T ss_pred ECHHHhcCCCCCCEEECCCCcCC
Confidence 5444332 3444555555543
No 303
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.82 E-value=1.4e-20 Score=184.83 Aligned_cols=141 Identities=20% Similarity=0.175 Sum_probs=108.5
Q ss_pred CCccceeccCccceEEEEEE-cCCcE--EEEEEccccccc----------------------hHHHHHHHHHHHHhhcCC
Q 008121 412 FSQEFLIGEGSLGRVYRAEF-ANGKI--MAVKKIDNAALS----------------------LQEEDNFLEAVSNMSRLR 466 (577)
Q Consensus 412 ~~~~~~lg~G~fg~Vy~~~~-~~~~~--vavK~~~~~~~~----------------------~~~~~~~~~e~~~l~~l~ 466 (577)
|...+.||+|+||.||+|.. .+|+. ||||+++..... ......+.+|++.+.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 55678999999999999987 78988 999987543111 012246889999999998
Q ss_pred CCce--eeEeeEEEeCCeEEEEEEecCC-C----CHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCCCeee
Q 008121 467 HPNI--VTLAGYCAEHGQRLLVYEYVGN-G----NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH-EVCLPSVVH 538 (577)
Q Consensus 467 H~ni--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH-~~~~~~ivH 538 (577)
|+++ ..++++ +..++||||+.+ | +|.++... .++..+..++.|++.||.||| +. +|+|
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---givH 194 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---ELVH 194 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 8864 334432 246899999942 4 66665431 234567889999999999999 88 9999
Q ss_pred cCCCCCCeeeCCCCCeEEeccccCcccCCC
Q 008121 539 RNFKSANILLDDELNPHLSDCGLAALTPNT 568 (577)
Q Consensus 539 rDlk~~NILl~~~~~~kl~DFGla~~~~~~ 568 (577)
|||||+|||+++ .++|+|||+|......
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~~~~ 222 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTLRHP 222 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEETTST
T ss_pred CCCCHHHEEEcC--cEEEEECcccccCCCc
Confidence 999999999998 9999999999876544
No 304
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.81 E-value=2.4e-19 Score=177.27 Aligned_cols=158 Identities=22% Similarity=0.267 Sum_probs=140.6
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEEe
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 160 (577)
.+++.|+|++|.++...+..|..+++|++|+|++|+|++..+..+. ++|++|+|++|++++..|..|..+++|++|+|
T Consensus 61 ~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 140 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSL 140 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEEC
Confidence 5799999999999977777789999999999999999965544443 89999999999999998899999999999999
Q ss_pred ccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCccccccccc-CCCCC-ccEEEeecCccccc
Q 008121 161 SRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSGLP-LTTLNVANNHFSGW 238 (577)
Q Consensus 161 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~L~l~~N~l~g~ 238 (577)
++|+|++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+|++.++. +..++ |+.|+|++|.+...
T Consensus 141 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 141 GYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred CCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 99999988888899999999999999999987777799999999999999999987664 55554 99999999999765
Q ss_pred cC
Q 008121 239 IP 240 (577)
Q Consensus 239 ~p 240 (577)
.+
T Consensus 221 c~ 222 (270)
T 2o6q_A 221 CN 222 (270)
T ss_dssp SS
T ss_pred Cc
Confidence 43
No 305
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.81 E-value=2.9e-20 Score=199.53 Aligned_cols=167 Identities=20% Similarity=0.172 Sum_probs=117.2
Q ss_pred cEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEeccC
Q 008121 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRN 163 (577)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N 163 (577)
.++.|+|++|.+++..| |+.+++|++|+|++|.|++..+. ++|++|+|++|+|++..+. .+++|+.|+|++|
T Consensus 59 ~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~---~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N 130 (487)
T 3oja_A 59 KLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG---PSIETLHAANNNISRVSCS---RGQGKKNIYLANN 130 (487)
T ss_dssp TCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC---TTCCEEECCSSCCCCEEEC---CCSSCEEEECCSS
T ss_pred CCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC---CCcCEEECcCCcCCCCCcc---ccCCCCEEECCCC
Confidence 44455555555544433 44555555555555554432211 4555666666666655443 3578899999999
Q ss_pred CCcccccccccCCCCCcEEeCcCCcccCCCCCCcc-CCCCCCeEEccCcccccccccCCCCCccEEEeecCccccccCc-
Q 008121 164 SLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFI-SLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPR- 241 (577)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~~p~- 241 (577)
+|++..|..|+++++|++|+|++|+|++.+|..+. .+++|++|+|++|.|++.++......|+.|+|++|.|++..|.
T Consensus 131 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 210 (487)
T 3oja_A 131 KITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFMGPEF 210 (487)
T ss_dssp CCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCEECGGG
T ss_pred CCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccccCCCCCEEECCCCCCCCCCHhH
Confidence 99998888899999999999999999988888876 7899999999999999875544434499999999999975553
Q ss_pred -ccccccceeecCCcCCC
Q 008121 242 -ELISIRTFIYDGNSFDN 258 (577)
Q Consensus 242 -~l~~l~~l~~~~n~~~~ 258 (577)
.+.++..|++++|.+..
T Consensus 211 ~~l~~L~~L~Ls~N~l~~ 228 (487)
T 3oja_A 211 QSAAGVTWISLRNNKLVL 228 (487)
T ss_dssp GGGTTCSEEECTTSCCCE
T ss_pred cCCCCccEEEecCCcCcc
Confidence 23467788889988764
No 306
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=2.1e-19 Score=173.26 Aligned_cols=150 Identities=23% Similarity=0.265 Sum_probs=132.7
Q ss_pred CCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCc
Q 008121 109 LRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNN 188 (577)
Q Consensus 109 L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 188 (577)
.+.+++++|+++ .+|..++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 99 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCEeEccCCCcC-ccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCc
Confidence 357889999998 7899899999999999999999999999999999999999999998888889999999999999999
Q ss_pred ccCCCCCCccCCCCCCeEEccCcccccccccCCCCC-ccEEEeecCccccccCccc---ccccceeecCCcCCCC
Q 008121 189 FSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP-LTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNG 259 (577)
Q Consensus 189 l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~L~l~~N~l~g~~p~~l---~~l~~l~~~~n~~~~~ 259 (577)
|++..+..|..+++|++|+|++|+|+..+..+..++ |+.|+|++|+|++..+..+ .+++.+.+.+|++.|.
T Consensus 100 l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 100 LTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred CCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 997777778999999999999999997766665555 9999999999997665544 4677888999998753
No 307
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.81 E-value=3.1e-20 Score=199.39 Aligned_cols=169 Identities=17% Similarity=0.192 Sum_probs=147.2
Q ss_pred CCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEec
Q 008121 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (577)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (577)
...++.|+|++|.|++..+ .++|++|+|++|+|++..+.. .++|+.|+|++|+|++..|..|+.+++|++|+|+
T Consensus 79 l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~~N~l~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 152 (487)
T 3oja_A 79 LSTLRTLDLNNNYVQELLV-----GPSIETLHAANNNISRVSCSR-GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLK 152 (487)
T ss_dssp CTTCCEEECCSSEEEEEEE-----CTTCCEEECCSSCCCCEEECC-CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECT
T ss_pred CCCCCEEEecCCcCCCCCC-----CCCcCEEECcCCcCCCCCccc-cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECC
Confidence 3589999999999987553 389999999999999766654 4899999999999999999999999999999999
Q ss_pred cCCCccccccccc-CCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccccCCCCC-ccEEEeecCcccccc
Q 008121 162 RNSLTQSIGDIFG-NLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP-LTTLNVANNHFSGWI 239 (577)
Q Consensus 162 ~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~L~l~~N~l~g~~ 239 (577)
+|+|++.+|..+. ++++|++|+|++|.|++. |. +..+++|++|+|++|.|++.++.+..++ |+.|+|++|.|++ +
T Consensus 153 ~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-l 229 (487)
T 3oja_A 153 LNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-I 229 (487)
T ss_dssp TSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-E
T ss_pred CCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-c
Confidence 9999999998886 799999999999999976 33 4468999999999999999888776665 9999999999996 7
Q ss_pred Ccccc---cccceeecCCcCCCC
Q 008121 240 PRELI---SIRTFIYDGNSFDNG 259 (577)
Q Consensus 240 p~~l~---~l~~l~~~~n~~~~~ 259 (577)
|..+. ++..+++++|++.|+
T Consensus 230 p~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 230 EKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp CTTCCCCTTCCEEECTTCCBCHH
T ss_pred chhhccCCCCCEEEcCCCCCcCc
Confidence 76654 567888999998754
No 308
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.81 E-value=1.3e-19 Score=199.96 Aligned_cols=174 Identities=24% Similarity=0.224 Sum_probs=94.0
Q ss_pred cEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCC-CC--CCccEEEccCCcCCCcCCCCccCCCCccEEEe
Q 008121 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQ-LP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (577)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 160 (577)
+++.|+|++|.+.+..|..|..+++|+.|+|++|++++..|.. +. ++|++|+|++|++++..|..|+.+++|++|+|
T Consensus 377 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 456 (606)
T 3t6q_A 377 HLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNL 456 (606)
T ss_dssp TCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEEC
Confidence 4555555555555555555555555555555555555444432 21 55555555555555555555555555556666
Q ss_pred ccCCCccc---ccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccc-cCCCCC-ccEEEeecCcc
Q 008121 161 SRNSLTQS---IGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSGLP-LTTLNVANNHF 235 (577)
Q Consensus 161 ~~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~L~l~~N~l 235 (577)
++|++++. .+..+..+++|++|+|++|++++..|..|..+++|++|+|++|+|++.++ .+..++ | .|++++|++
T Consensus 457 ~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l 535 (606)
T 3t6q_A 457 QGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHI 535 (606)
T ss_dssp TTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCC
T ss_pred CCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcc
Confidence 55555542 12345555556666666666555555555555566666666665555433 344333 4 556666666
Q ss_pred ccccCccc---ccccceeecCCcCCC
Q 008121 236 SGWIPREL---ISIRTFIYDGNSFDN 258 (577)
Q Consensus 236 ~g~~p~~l---~~l~~l~~~~n~~~~ 258 (577)
++..|..+ .+++.+++++|++.|
T Consensus 536 ~~~~~~~~~~l~~L~~L~l~~N~~~c 561 (606)
T 3t6q_A 536 SIILPSLLPILSQQRTINLRQNPLDC 561 (606)
T ss_dssp CCCCGGGHHHHHTSSEEECTTCCEEC
T ss_pred cccCHhhcccCCCCCEEeCCCCCccc
Confidence 55544433 244555556665543
No 309
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.81 E-value=3.2e-20 Score=210.56 Aligned_cols=156 Identities=19% Similarity=0.299 Sum_probs=141.4
Q ss_pred ccccccCCCCCCEEEccCCCcCC-----------------cCCCCCC----CCccEEEccCCcCCCcCCCCccCCCCccE
Q 008121 99 MGYLLSDLLSLRKFDLSGNSIHD-----------------TIPYQLP----PNLTSLNLASNNFSGNLPYSIASMVSLSY 157 (577)
Q Consensus 99 ~~~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~----~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 157 (577)
+|..|++|++|+.|+|++|+|+| .+|..+. ++|++|+|++|++.+.+|..|+++++|+.
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 88899999999999999999998 3888774 89999999999999999999999999999
Q ss_pred EEeccCC-Ccc-cccccccCCC-------CCcEEeCcCCcccCCCCC--CccCCCCCCeEEccCcccccccccCCCCC-c
Q 008121 158 LNVSRNS-LTQ-SIGDIFGNLA-------GLATLDLSFNNFSGDLPN--SFISLSNISSLYLQNNQVTGSLNVFSGLP-L 225 (577)
Q Consensus 158 L~L~~N~-l~~-~~p~~~~~l~-------~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L 225 (577)
|+|++|+ |+| .+|..+++++ +|+.|+|++|+|+ .+|. .|+++++|++|+|++|+|+ .++.+..++ |
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L 597 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKL 597 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEE
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcc
Confidence 9999998 999 8998776665 9999999999999 8998 8999999999999999999 555777766 9
Q ss_pred cEEEeecCccccccCcccc---c-ccceeecCCcCC
Q 008121 226 TTLNVANNHFSGWIPRELI---S-IRTFIYDGNSFD 257 (577)
Q Consensus 226 ~~L~l~~N~l~g~~p~~l~---~-l~~l~~~~n~~~ 257 (577)
+.|+|++|+|+ .+|..+. + ++.|++++|.+.
T Consensus 598 ~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~ 632 (876)
T 4ecn_A 598 TDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK 632 (876)
T ss_dssp SEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC
T ss_pred eEEECcCCccc-cchHHHhhccccCCEEECcCCCCC
Confidence 99999999999 8997665 4 777899999876
No 310
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.81 E-value=1.1e-19 Score=200.78 Aligned_cols=187 Identities=20% Similarity=0.167 Sum_probs=159.3
Q ss_pred CCCCCC--CccEEeeC-----------CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccE
Q 008121 69 DPCGES--WKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTS 133 (577)
Q Consensus 69 ~~c~~~--w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~ 133 (577)
..|.|. +..|.|.. ..++.|+|++|.|++..|..|+++++|++|+|++|++++..|..+. ++|++
T Consensus 6 ~~C~~~~~~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 85 (606)
T 3t6q_A 6 QKCIEKEVNKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDT 85 (606)
T ss_dssp CCCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CceecccCCceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCe
Confidence 345433 56788964 3689999999999999999999999999999999999988887775 89999
Q ss_pred EEccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCccc
Q 008121 134 LNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQV 213 (577)
Q Consensus 134 L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l 213 (577)
|+|++|++++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..+..+++|++|+|++|.+
T Consensus 86 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 165 (606)
T 3t6q_A 86 LVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAI 165 (606)
T ss_dssp EECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCC
T ss_pred eeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcc
Confidence 99999999999999999999999999999999998888999999999999999999974434555699999999999999
Q ss_pred ccccc-cCCCCC-cc--EEEeecCccccccCcccc--cccceeecCCc
Q 008121 214 TGSLN-VFSGLP-LT--TLNVANNHFSGWIPRELI--SIRTFIYDGNS 255 (577)
Q Consensus 214 ~~~~~-~~~~~~-L~--~L~l~~N~l~g~~p~~l~--~l~~l~~~~n~ 255 (577)
++..+ .+..++ |+ .|++++|.+++..|..+. +++.+++.+|.
T Consensus 166 ~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~ 213 (606)
T 3t6q_A 166 HYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQ 213 (606)
T ss_dssp CEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCS
T ss_pred cccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCch
Confidence 98754 344444 66 899999999998887654 45666676664
No 311
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.81 E-value=7.1e-20 Score=184.41 Aligned_cols=178 Identities=23% Similarity=0.253 Sum_probs=157.8
Q ss_pred CCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCC-CCCC--CCccEEEccCCcCCCcCCCCccCCCCccEE
Q 008121 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIP-YQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYL 158 (577)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 158 (577)
...++.|+|++|.+++ +|..+..+++|++|+|++|++++..+ ..+. ++|++|+|++|++++..|..|..+++|++|
T Consensus 77 ~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 77 TTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp CSCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred ccccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 3689999999999984 67789999999999999999996554 2333 899999999999999999999999999999
Q ss_pred EeccCCCcc-cccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccc-cCCCCC-ccEEEeecCcc
Q 008121 159 NVSRNSLTQ-SIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSGLP-LTTLNVANNHF 235 (577)
Q Consensus 159 ~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~L~l~~N~l 235 (577)
+|++|.+++ .+|..+..+++|++|+|++|++++..|..|..+++|++|+|++|+|++..+ .+..++ |+.|++++|++
T Consensus 156 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 235 (306)
T 2z66_A 156 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 235 (306)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCC
T ss_pred ECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCC
Confidence 999999997 689999999999999999999998889999999999999999999998765 455554 99999999999
Q ss_pred ccccCcccc----cccceeecCCcCCCCC
Q 008121 236 SGWIPRELI----SIRTFIYDGNSFDNGP 260 (577)
Q Consensus 236 ~g~~p~~l~----~l~~l~~~~n~~~~~~ 260 (577)
++..|..+. +++.|++++|++.|..
T Consensus 236 ~~~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 236 MTSKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp CBCSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred cccCHHHHHhhhccCCEEEccCCCeeccc
Confidence 998887654 5678999999998753
No 312
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.80 E-value=3.6e-19 Score=181.31 Aligned_cols=172 Identities=17% Similarity=0.262 Sum_probs=150.5
Q ss_pred CCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEec
Q 008121 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (577)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (577)
..+++.|+|++|.+++..|..|+.+++|++|+|++|+|+ .+|..+.++|++|++++|++++..+..|.++++|++|+|+
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 153 (330)
T 1xku_A 75 LKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELG 153 (330)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECC
T ss_pred CCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhcccccEEECCCCcccccCHhHhcCCccccEEECC
Confidence 368999999999999999999999999999999999999 6888888999999999999998888889999999999999
Q ss_pred cCCCc--ccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccc-cCCCCC-ccEEEeecCcccc
Q 008121 162 RNSLT--QSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSGLP-LTTLNVANNHFSG 237 (577)
Q Consensus 162 ~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~L~l~~N~l~g 237 (577)
+|+++ +..+..+.++++|++|++++|+++ .+|..+. ++|++|+|++|++++..+ .+..++ |+.|++++|.+++
T Consensus 154 ~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 230 (330)
T 1xku_A 154 TNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 230 (330)
T ss_dssp SSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCE
T ss_pred CCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCce
Confidence 99996 477888999999999999999998 5776664 789999999999988754 466655 9999999999998
Q ss_pred ccCcccc---cccceeecCCcCC
Q 008121 238 WIPRELI---SIRTFIYDGNSFD 257 (577)
Q Consensus 238 ~~p~~l~---~l~~l~~~~n~~~ 257 (577)
..|..+. +++.|++++|.+.
T Consensus 231 ~~~~~~~~l~~L~~L~L~~N~l~ 253 (330)
T 1xku_A 231 VDNGSLANTPHLRELHLNNNKLV 253 (330)
T ss_dssp ECTTTGGGSTTCCEEECCSSCCS
T ss_pred eChhhccCCCCCCEEECCCCcCc
Confidence 7775554 6677888888876
No 313
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.80 E-value=3.6e-19 Score=168.77 Aligned_cols=170 Identities=24% Similarity=0.280 Sum_probs=141.0
Q ss_pred EEeeCCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCc
Q 008121 78 VACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSL 155 (577)
Q Consensus 78 v~C~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L 155 (577)
-.|.. +.+++++++++.. |..+ .++|++|+|++|+|++..+..+. ++|++|+|++|++++..+..|..+++|
T Consensus 5 C~C~~---~~v~c~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 78 (208)
T 2o6s_A 5 CSCSG---TTVECYSQGRTSV-PTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSL 78 (208)
T ss_dssp CEEET---TEEECCSSCCSSC-CSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CEECC---CEEEecCCCccCC-CCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCc
Confidence 45643 4688999998844 4333 46899999999999965554443 899999999999998877788999999
Q ss_pred cEEEeccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCccccccccc-CCCCC-ccEEEeecC
Q 008121 156 SYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSGLP-LTTLNVANN 233 (577)
Q Consensus 156 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~L~l~~N 233 (577)
++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++.++. +..++ |+.|++++|
T Consensus 79 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 158 (208)
T 2o6s_A 79 TYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDN 158 (208)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSC
T ss_pred CEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCC
Confidence 9999999999988888899999999999999999977777789999999999999999987764 55554 999999999
Q ss_pred ccccccCcccccccceeecCCcCC
Q 008121 234 HFSGWIPRELISIRTFIYDGNSFD 257 (577)
Q Consensus 234 ~l~g~~p~~l~~l~~l~~~~n~~~ 257 (577)
.+.+..| +++.|....|.+.
T Consensus 159 ~~~~~~~----~l~~L~~~~n~~~ 178 (208)
T 2o6s_A 159 PWDCTCP----GIRYLSEWINKHS 178 (208)
T ss_dssp CBCCCTT----TTHHHHHHHHHCT
T ss_pred CeecCCC----CHHHHHHHHHhCC
Confidence 9997765 4556666666654
No 314
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.80 E-value=1.4e-19 Score=207.55 Aligned_cols=185 Identities=20% Similarity=0.161 Sum_probs=158.7
Q ss_pred CCCccEEeeCCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcC-CCCCC--CCccEEEccCCcCCCcCCCCc
Q 008121 73 ESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTI-PYQLP--PNLTSLNLASNNFSGNLPYSI 149 (577)
Q Consensus 73 ~~w~gv~C~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~--~~L~~L~l~~N~l~~~~p~~~ 149 (577)
+.|..|.+-..+++.|+|++|.|++..|..|.++++|++|||++|.+.+.+ |..+. ++|++|+|++|++++..|..|
T Consensus 14 ~~L~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~ 93 (844)
T 3j0a_A 14 CNLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAF 93 (844)
T ss_dssp CCSSCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSS
T ss_pred CCCCCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHc
Confidence 467777774468999999999999999999999999999999999887777 55554 899999999999999999999
Q ss_pred cCCCCccEEEeccCCCccccccc--ccCCCCCcEEeCcCCcccCCCC-CCccCCCCCCeEEccCcccccccc-cCCC---
Q 008121 150 ASMVSLSYLNVSRNSLTQSIGDI--FGNLAGLATLDLSFNNFSGDLP-NSFISLSNISSLYLQNNQVTGSLN-VFSG--- 222 (577)
Q Consensus 150 ~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~~~-~~~~--- 222 (577)
+++++|++|+|++|.+++.+|.. |.++++|++|+|++|++++..| ..|+++++|++|+|++|.+++..+ .+..
T Consensus 94 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~ 173 (844)
T 3j0a_A 94 QGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQG 173 (844)
T ss_dssp CSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHH
T ss_pred cCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccC
Confidence 99999999999999999977765 9999999999999999997765 579999999999999999988654 3333
Q ss_pred CCccEEEeecCccccccCccccc---------ccceeecCCcCC
Q 008121 223 LPLTTLNVANNHFSGWIPRELIS---------IRTFIYDGNSFD 257 (577)
Q Consensus 223 ~~L~~L~l~~N~l~g~~p~~l~~---------l~~l~~~~n~~~ 257 (577)
..|+.|++++|.+++.+|..+.. ++.|++++|.+.
T Consensus 174 ~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~ 217 (844)
T 3j0a_A 174 KTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWT 217 (844)
T ss_dssp CSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSS
T ss_pred CccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCc
Confidence 34889999999999888765443 677888888654
No 315
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.80 E-value=5.2e-19 Score=176.76 Aligned_cols=153 Identities=21% Similarity=0.213 Sum_probs=136.3
Q ss_pred CCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEE
Q 008121 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (577)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 159 (577)
..+++.|+|++|.|++..+. +.+++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+
T Consensus 54 l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~ 130 (290)
T 1p9a_G 54 YTRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELY 130 (290)
T ss_dssp CTTCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEE
Confidence 36899999999999976543 89999999999999998 6776654 8999999999999988889999999999999
Q ss_pred eccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccccCCCC-CccEEEeecCcccc
Q 008121 160 VSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGL-PLTTLNVANNHFSG 237 (577)
Q Consensus 160 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~L~~L~l~~N~l~g 237 (577)
|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|+..+..+... .|+.|+|++|.+..
T Consensus 131 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccC
Confidence 9999999988888999999999999999999655566788999999999999999877655444 49999999999974
No 316
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.80 E-value=1.7e-19 Score=199.63 Aligned_cols=175 Identities=22% Similarity=0.253 Sum_probs=142.7
Q ss_pred CCCCCC--CccEEeeC-----------CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccE
Q 008121 69 DPCGES--WKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTS 133 (577)
Q Consensus 69 ~~c~~~--w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~ 133 (577)
+||.+. -..|.|.. ..++.|||++|+|++..+.+|.++++|++|||++|+|++..|..|. ++|++
T Consensus 25 ~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~ 104 (635)
T 4g8a_A 25 EPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLST 104 (635)
T ss_dssp CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCE
Confidence 466432 23577863 3689999999999988888999999999999999999965565554 89999
Q ss_pred EEccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcccC-CCCCCccCCCCCCeEEccCcc
Q 008121 134 LNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSG-DLPNSFISLSNISSLYLQNNQ 212 (577)
Q Consensus 134 L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~ 212 (577)
|+|++|+|++..+..|.++++|++|+|++|+|++..+..|+++++|++|+|++|+|++ .+|..++.+++|++|+|++|+
T Consensus 105 L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~ 184 (635)
T 4g8a_A 105 LILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 184 (635)
T ss_dssp EECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSC
T ss_pred EEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcc
Confidence 9999999998888889999999999999999998888889999999999999999975 467888999999999999999
Q ss_pred cccccc-cCCC---CC--ccEEEeecCccccccCccc
Q 008121 213 VTGSLN-VFSG---LP--LTTLNVANNHFSGWIPREL 243 (577)
Q Consensus 213 l~~~~~-~~~~---~~--L~~L~l~~N~l~g~~p~~l 243 (577)
|++..+ .+.. .. ...++++.|.++...|..+
T Consensus 185 l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~ 221 (635)
T 4g8a_A 185 IQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF 221 (635)
T ss_dssp CCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTT
T ss_pred ccccccccccchhhhhhhhhhhhcccCcccccCcccc
Confidence 988654 2222 22 4578888888886555443
No 317
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.80 E-value=3.9e-19 Score=195.89 Aligned_cols=174 Identities=20% Similarity=0.234 Sum_probs=123.8
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEEe
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 160 (577)
..++.|+|++|.|++..|..|+.+++|++|+|++|.|++..|..+. ++|++|+|++|+|++..+..|+++++|++|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 4688888988888888888888888888888888888876665544 78888888888888666666788888888888
Q ss_pred ccCCCcccccccccCCCCCcEEeCcCCcccCCC-----------------------------------------------
Q 008121 161 SRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDL----------------------------------------------- 193 (577)
Q Consensus 161 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~----------------------------------------------- 193 (577)
++|.|++..|..|+++++|++|+|++|+|++..
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L 234 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVEL 234 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCC
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCC
Confidence 888888877777777777777777777776421
Q ss_pred ------------CCCccCCCCCCeEEccCcccccccc-cCCCCC-ccEEEeecCccccccCcc---cccccceeecCCcC
Q 008121 194 ------------PNSFISLSNISSLYLQNNQVTGSLN-VFSGLP-LTTLNVANNHFSGWIPRE---LISIRTFIYDGNSF 256 (577)
Q Consensus 194 ------------p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~L~l~~N~l~g~~p~~---l~~l~~l~~~~n~~ 256 (577)
+..+..+++|++|+|++|.|++.++ .+..++ |+.|+|++|.|++ +|.. +.++..|++++|.+
T Consensus 235 ~~L~L~~n~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l 313 (597)
T 3oja_B 235 TILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHL 313 (597)
T ss_dssp CEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCC
T ss_pred CEEECCCCCCCCChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCC
Confidence 1124455667777777777776543 344444 6777777777765 2322 34555666666665
Q ss_pred C
Q 008121 257 D 257 (577)
Q Consensus 257 ~ 257 (577)
.
T Consensus 314 ~ 314 (597)
T 3oja_B 314 L 314 (597)
T ss_dssp C
T ss_pred C
Confidence 4
No 318
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.80 E-value=3.8e-19 Score=190.54 Aligned_cols=174 Identities=18% Similarity=0.231 Sum_probs=134.0
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEEe
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 160 (577)
.+++.|+|++|.+++..|..|+++++|++|+|++|+|++..+..+. ++|++|+|++|++++..|..|..+++|++|+|
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 135 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 135 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEE
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEEC
Confidence 5789999999999998899999999999999999999854433343 88999999999999888889999999999999
Q ss_pred ccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccc-cCCCCC-ccEEEeecCccccc
Q 008121 161 SRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSGLP-LTTLNVANNHFSGW 238 (577)
Q Consensus 161 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~L~l~~N~l~g~ 238 (577)
++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|.+.+..+ .+..++ |+.|++++|.+.+.
T Consensus 136 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~ 215 (477)
T 2id5_A 136 GDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDT 215 (477)
T ss_dssp CCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCE
T ss_pred CCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccc
Confidence 9999998888889999999999999999986555668888888888888888877554 344333 56666665555554
Q ss_pred cCcccc---cccceeecCCcC
Q 008121 239 IPRELI---SIRTFIYDGNSF 256 (577)
Q Consensus 239 ~p~~l~---~l~~l~~~~n~~ 256 (577)
+|.... +++.|++++|.+
T Consensus 216 ~~~~~~~~~~L~~L~l~~n~l 236 (477)
T 2id5_A 216 MTPNCLYGLNLTSLSITHCNL 236 (477)
T ss_dssp ECTTTTTTCCCSEEEEESSCC
T ss_pred cCcccccCccccEEECcCCcc
Confidence 443222 344444444433
No 319
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.79 E-value=7.6e-20 Score=185.31 Aligned_cols=169 Identities=20% Similarity=0.163 Sum_probs=121.1
Q ss_pred CCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEec
Q 008121 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (577)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (577)
..+++.|+|++|.+++..+ +..+++|++|+|++|+|++..+. ++|++|++++|++++..+.. +++|++|+|+
T Consensus 57 l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~~---~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~ 128 (317)
T 3o53_A 57 FTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG---PSIETLHAANNNISRVSCSR---GQGKKNIYLA 128 (317)
T ss_dssp CTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEEC---TTCCEEECCSSCCSEEEECC---CSSCEEEECC
T ss_pred CCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccCC---CCcCEEECCCCccCCcCccc---cCCCCEEECC
Confidence 4578888888888887665 88888888888888888753222 67777777777777655443 5678888888
Q ss_pred cCCCcccccccccCCCCCcEEeCcCCcccCCCCCCcc-CCCCCCeEEccCcccccccccCCCCCccEEEeecCccccccC
Q 008121 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFI-SLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIP 240 (577)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~~p 240 (577)
+|++++..|..+..+++|++|+|++|++++..|..+. .+++|++|+|++|.|++.........|+.|++++|+|++..|
T Consensus 129 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l~~l~~ 208 (317)
T 3o53_A 129 NNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFMGP 208 (317)
T ss_dssp SSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCEECG
T ss_pred CCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccccccccccCCEEECCCCcCCcchh
Confidence 8888877777788888888888888888876666653 677888888888888776443333348888888888875433
Q ss_pred c--ccccccceeecCCcCCC
Q 008121 241 R--ELISIRTFIYDGNSFDN 258 (577)
Q Consensus 241 ~--~l~~l~~l~~~~n~~~~ 258 (577)
. .+.+++.|++++|.+..
T Consensus 209 ~~~~l~~L~~L~L~~N~l~~ 228 (317)
T 3o53_A 209 EFQSAAGVTWISLRNNKLVL 228 (317)
T ss_dssp GGGGGTTCSEEECTTSCCCE
T ss_pred hhcccCcccEEECcCCcccc
Confidence 2 23356677778877653
No 320
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.79 E-value=3.4e-19 Score=195.01 Aligned_cols=174 Identities=21% Similarity=0.302 Sum_probs=125.9
Q ss_pred cEEEEEcCCCCCcccccccc-----cCCC--------------------------CCCEEEccCCCcCCcCCCCCCCCcc
Q 008121 84 AVVSIDISGLGLSGTMGYLL-----SDLL--------------------------SLRKFDLSGNSIHDTIPYQLPPNLT 132 (577)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~~-----~~l~--------------------------~L~~L~Ls~N~l~~~~p~~~~~~L~ 132 (577)
.++.|++++|.++|.+|..+ ..++ +|+.|++++|.+.........++|+
T Consensus 277 ~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~ 356 (562)
T 3a79_B 277 PVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFT 356 (562)
T ss_dssp SEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCC
T ss_pred cccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCce
Confidence 78899999999998888766 3333 3566666666654222112337888
Q ss_pred EEEccCCcCCCcCCCCccCCCCccEEEeccCCCcc--cccccccCCCCCcEEeCcCCcccCCCCC-CccCCCCCCeEEcc
Q 008121 133 SLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQ--SIGDIFGNLAGLATLDLSFNNFSGDLPN-SFISLSNISSLYLQ 209 (577)
Q Consensus 133 ~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~l~ 209 (577)
+|+|++|++++.+|..++++++|++|+|++|++++ .+|..|.++++|++|+|++|++++.+|. .+..+++|++|+|+
T Consensus 357 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~ 436 (562)
T 3a79_B 357 FLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLS 436 (562)
T ss_dssp EEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECC
T ss_pred EEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECC
Confidence 88888888888888888888888888888888886 4456788888888888888888875665 47778888888888
Q ss_pred CcccccccccCCCCCccEEEeecCccccccCcccc---cccceeecCCcCCC
Q 008121 210 NNQVTGSLNVFSGLPLTTLNVANNHFSGWIPRELI---SIRTFIYDGNSFDN 258 (577)
Q Consensus 210 ~N~l~~~~~~~~~~~L~~L~l~~N~l~g~~p~~l~---~l~~l~~~~n~~~~ 258 (577)
+|+|++.++......|+.|++++|+|+ .+|..+. +++.|++++|.+..
T Consensus 437 ~n~l~~~~~~~l~~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~ 487 (562)
T 3a79_B 437 SNMLTGSVFRCLPPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS 487 (562)
T ss_dssp SSCCCGGGGSSCCTTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC
T ss_pred CCCCCcchhhhhcCcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC
Confidence 888877554322235888888888887 6776543 55667788887763
No 321
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.79 E-value=6.5e-21 Score=214.00 Aligned_cols=199 Identities=21% Similarity=0.174 Sum_probs=83.2
Q ss_pred CChHHHHHHHHHHHhcCCCC--CCCCCCCCCCCCCCCCCccEEeeCCcEEEEEcCCCCCccc------------------
Q 008121 39 TDSSDVQALQVLYTSLNSPS--VLTNWKGNEGDPCGESWKGVACEGSAVVSIDISGLGLSGT------------------ 98 (577)
Q Consensus 39 ~~~~~~~~l~~~~~~~~~~~--~l~~w~~~~~~~c~~~w~gv~C~~~~v~~l~l~~~~l~g~------------------ 98 (577)
....+.++|+.++..+.... .-..|......++ .|.++.++.++++.|+|.+|++...
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~ 206 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSG--TATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDED 206 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccc--cCCCceecCCccceEEeeCCCCCcchhhHhhcCccCcccccCc
Confidence 34567789999988875432 2335653333333 6999999888888887776665542
Q ss_pred ---------ccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEEeccCCCcc
Q 008121 99 ---------MGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQ 167 (577)
Q Consensus 99 ---------~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 167 (577)
.+..+..++.|+.|+|++|+|. .+|..+. ++|++|+|++|+|+ .+|..|++|++|++|+|++|+|+
T Consensus 207 ~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 207 DDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT- 283 (727)
T ss_dssp ---------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-
T ss_pred cccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-
Confidence 1334455555555555555555 3443332 55555555555555 55555555555555555555555
Q ss_pred cccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCccccccccc-CCCCC--ccEEEeecCccccccCccc
Q 008121 168 SIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSGLP--LTTLNVANNHFSGWIPREL 243 (577)
Q Consensus 168 ~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~--L~~L~l~~N~l~g~~p~~l 243 (577)
.+|..|++|++|++|+|++|.|+ .+|..|+.|++|++|+|++|.|++.++. +.... +..|+|++|.++|.+|..+
T Consensus 284 ~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l 361 (727)
T 4b8c_D 284 SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHER 361 (727)
T ss_dssp SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-
T ss_pred ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcccc
Confidence 44555555555555555555554 4555555555555555555555554432 11111 2234555555555555544
No 322
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.79 E-value=7.7e-19 Score=196.61 Aligned_cols=178 Identities=20% Similarity=0.195 Sum_probs=121.6
Q ss_pred CcEEEEEcCCCCCccccc-ccccCCCCCCEEEccCCCcCCc--------------------------CCCCCC--CCccE
Q 008121 83 SAVVSIDISGLGLSGTMG-YLLSDLLSLRKFDLSGNSIHDT--------------------------IPYQLP--PNLTS 133 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~-~~~~~l~~L~~L~Ls~N~l~~~--------------------------~p~~~~--~~L~~ 133 (577)
.+++.|+|++|.+++.+| ..+..+++|+.|+|++|++++. +|..+. ++|++
T Consensus 405 ~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~ 484 (680)
T 1ziw_A 405 GHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTI 484 (680)
T ss_dssp TTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCE
T ss_pred CCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCE
Confidence 467888888888877665 5677777777777777776543 333333 56777
Q ss_pred EEccCCcCCCcCCCCccCCCCccEEEeccCCCccccc--------ccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCe
Q 008121 134 LNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIG--------DIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISS 205 (577)
Q Consensus 134 L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 205 (577)
|+|++|++++..|..|.++++|++|+|++|++++..+ ..|.++++|++|+|++|+|+...+..|.++++|++
T Consensus 485 L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~ 564 (680)
T 1ziw_A 485 LDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKI 564 (680)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred EECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcce
Confidence 7777777776666667777777777777777765422 23566777777777777777333345777777888
Q ss_pred EEccCccccccccc-CCCCC-ccEEEeecCccccccCc----ccccccceeecCCcCCCCC
Q 008121 206 LYLQNNQVTGSLNV-FSGLP-LTTLNVANNHFSGWIPR----ELISIRTFIYDGNSFDNGP 260 (577)
Q Consensus 206 L~l~~N~l~~~~~~-~~~~~-L~~L~l~~N~l~g~~p~----~l~~l~~l~~~~n~~~~~~ 260 (577)
|+|++|+|++.++. +..++ |+.|+|++|+|++..|. .+.+++.+++++|+|.|..
T Consensus 565 L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c 625 (680)
T 1ziw_A 565 IDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTC 625 (680)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCC
T ss_pred eECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCC
Confidence 88888877776553 44444 78888888888766654 3456777788888887653
No 323
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.79 E-value=9e-19 Score=182.65 Aligned_cols=173 Identities=20% Similarity=0.240 Sum_probs=97.6
Q ss_pred cEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEEec
Q 008121 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (577)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (577)
+++.|+|++|.+++..+..|+.+++|++|+|++|++++..|..+. ++|++|+|++|+++...+..|.++++|++|+|+
T Consensus 70 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~ 149 (390)
T 3o6n_A 70 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMS 149 (390)
T ss_dssp CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred cCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECC
Confidence 456666666666655555666666666666666666654444333 556666666666654333344556666666666
Q ss_pred cCCCcccccccccCCCCCcEEeCcCCcccCCC------------------------------------------------
Q 008121 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDL------------------------------------------------ 193 (577)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~------------------------------------------------ 193 (577)
+|++++..|..|.++++|++|+|++|++++..
T Consensus 150 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~ 229 (390)
T 3o6n_A 150 NNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELT 229 (390)
T ss_dssp SSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCC
T ss_pred CCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccCCCCcceEEECCCCeeeecccccccccc
Confidence 66666555555555555555555555554211
Q ss_pred -----------CCCccCCCCCCeEEccCcccccccc-cCCCCC-ccEEEeecCccccccCc---ccccccceeecCCcCC
Q 008121 194 -----------PNSFISLSNISSLYLQNNQVTGSLN-VFSGLP-LTTLNVANNHFSGWIPR---ELISIRTFIYDGNSFD 257 (577)
Q Consensus 194 -----------p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~L~l~~N~l~g~~p~---~l~~l~~l~~~~n~~~ 257 (577)
+..+..+++|++|+|++|.+++.++ .+..++ |+.|++++|++++ +|. .+.+++.|++++|.+.
T Consensus 230 ~L~l~~n~l~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~ 308 (390)
T 3o6n_A 230 ILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL 308 (390)
T ss_dssp EEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC
T ss_pred EEECCCCCCcccHHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce
Confidence 0123445666677777777666533 344444 6777777777764 232 2345566666666554
No 324
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.79 E-value=2.5e-19 Score=173.76 Aligned_cols=170 Identities=18% Similarity=0.240 Sum_probs=145.0
Q ss_pred CCcEEEEEcCCCC-CcccccccccCCCCCCEEEccC-CCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCcc-
Q 008121 82 GSAVVSIDISGLG-LSGTMGYLLSDLLSLRKFDLSG-NSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLS- 156 (577)
Q Consensus 82 ~~~v~~l~l~~~~-l~g~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~- 156 (577)
..+++.|+|++|. +++..+..|.++++|++|+|++ |+|++..+..+. ++|++|+|++|++++ +|. |..+++|+
T Consensus 54 l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 3589999999997 8877777999999999999999 999965444443 899999999999997 676 88899998
Q ss_pred --EEEeccC-CCcccccccccCCCCCc-EEeCcCCcccCCCCCCccCCCCCCeEEccCcc-cccccc-cCCCC--CccEE
Q 008121 157 --YLNVSRN-SLTQSIGDIFGNLAGLA-TLDLSFNNFSGDLPNSFISLSNISSLYLQNNQ-VTGSLN-VFSGL--PLTTL 228 (577)
Q Consensus 157 --~L~L~~N-~l~~~~p~~~~~l~~L~-~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~~~~~-~~~~~--~L~~L 228 (577)
+|+|++| ++++..+..|.++++|+ +|+|++|+++ .+|......++|++|+|++|+ |++.++ .+..+ .|+.|
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L 210 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLL 210 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEE
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEE
Confidence 9999999 99988888899999999 9999999999 666654445899999999995 998754 46666 49999
Q ss_pred EeecCccccccCcccccccceeecCC
Q 008121 229 NVANNHFSGWIPRELISIRTFIYDGN 254 (577)
Q Consensus 229 ~l~~N~l~g~~p~~l~~l~~l~~~~n 254 (577)
++++|+|++..+..+.+++.|.+.++
T Consensus 211 ~l~~N~l~~l~~~~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 211 DVSQTSVTALPSKGLEHLKELIARNT 236 (239)
T ss_dssp ECTTCCCCCCCCTTCTTCSEEECTTC
T ss_pred ECCCCccccCChhHhccCceeeccCc
Confidence 99999999655566888888887765
No 325
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.79 E-value=4e-19 Score=167.05 Aligned_cols=151 Identities=17% Similarity=0.299 Sum_probs=127.0
Q ss_pred CCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEec
Q 008121 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (577)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (577)
..+++.|+|++|+++ .+| .+..+++|++|+|++|.++..-+..-.++|++|+|++|++++..|..|+.+++|++|+|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 357889999999998 555 699999999999999988743222233899999999999999889999999999999999
Q ss_pred cCCCcccccccccCCCCCcEEeCcCCc-ccCCCCCCccCCCCCCeEEccCcccccccccCCCCC-ccEEEeecCcccc
Q 008121 162 RNSLTQSIGDIFGNLAGLATLDLSFNN-FSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP-LTTLNVANNHFSG 237 (577)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~L~l~~N~l~g 237 (577)
+|++++..|..+..+++|++|+|++|+ ++ .+| .+..+++|++|++++|++++.. .+..++ |+.|++++|++.+
T Consensus 121 ~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp SSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCT-TGGGCSSCCEEEECBC----
T ss_pred CCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChH-HhccCCCCCEEEeeCcccCC
Confidence 999999889999999999999999998 65 676 6899999999999999999855 444444 9999999999864
No 326
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.79 E-value=2.1e-19 Score=194.71 Aligned_cols=172 Identities=18% Similarity=0.264 Sum_probs=140.2
Q ss_pred cEEEEEcCCCCCcccccccc-----cCCCCCCEEEccCCCcCCcCC----------------------------CCCCCC
Q 008121 84 AVVSIDISGLGLSGTMGYLL-----SDLLSLRKFDLSGNSIHDTIP----------------------------YQLPPN 130 (577)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~~-----~~l~~L~~L~Ls~N~l~~~~p----------------------------~~~~~~ 130 (577)
.++.|+|++|.++|.+|..+ +.+++|+.+++++|.+ .+| ..-.++
T Consensus 248 ~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~ 325 (520)
T 2z7x_B 248 TVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISP 325 (520)
T ss_dssp SCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCC
T ss_pred cccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCCc
Confidence 67788888888888888777 6666666666666555 233 123389
Q ss_pred ccEEEccCCcCCCcCCCCccCCCCccEEEeccCCCcc--cccccccCCCCCcEEeCcCCcccCCCCCC-ccCCCCCCeEE
Q 008121 131 LTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQ--SIGDIFGNLAGLATLDLSFNNFSGDLPNS-FISLSNISSLY 207 (577)
Q Consensus 131 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L~ 207 (577)
|++|+|++|++++.+|..++.+++|++|+|++|++++ .+|..+.++++|++|+|++|++++.+|.. +..+++|++|+
T Consensus 326 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~ 405 (520)
T 2z7x_B 326 FLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLN 405 (520)
T ss_dssp CCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEE
T ss_pred ccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEE
Confidence 9999999999999999999999999999999999997 67788999999999999999999867764 88899999999
Q ss_pred ccCcccccccccCCCCCccEEEeecCccccccCcccc---cccceeecCCcCCC
Q 008121 208 LQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPRELI---SIRTFIYDGNSFDN 258 (577)
Q Consensus 208 l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~~p~~l~---~l~~l~~~~n~~~~ 258 (577)
|++|++++..+......|+.|++++|+|+ .+|..+. +++.|++++|.+..
T Consensus 406 Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~ 458 (520)
T 2z7x_B 406 MSSNILTDTIFRCLPPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS 458 (520)
T ss_dssp CCSSCCCGGGGGSCCTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC
T ss_pred CcCCCCCcchhhhhcccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc
Confidence 99999988665433345999999999999 7887554 56778899998764
No 327
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.78 E-value=7.6e-19 Score=177.16 Aligned_cols=168 Identities=18% Similarity=0.302 Sum_probs=129.1
Q ss_pred CCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEec
Q 008121 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (577)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (577)
..+++.|+|++|.+++..+ +..+++|++|+|++|+|++.....-.++|++|+|++|++++. |. +..+++|++|+|+
T Consensus 62 l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~ 137 (308)
T 1h6u_A 62 LNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV-TP-LAGLSNLQVLYLD 137 (308)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCCGGGTTCTTCCEEECTTSCCCCC-GG-GTTCTTCCEEECC
T ss_pred cCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCchhhcCCCCCCEEECCCCCCCCc-hh-hcCCCCCCEEECC
Confidence 4678888999888887655 888888999999999888532222237889999999988864 33 8888889999999
Q ss_pred cCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccccCCCC-CccEEEeecCccccccC
Q 008121 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGL-PLTTLNVANNHFSGWIP 240 (577)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~L~~L~l~~N~l~g~~p 240 (577)
+|++++..+ +..+++|++|+|++|++++ ++. +..+++|+.|+|++|++++..+ +..+ .|+.|++++|++++..|
T Consensus 138 ~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~l~~~~~ 212 (308)
T 1h6u_A 138 LNQITNISP--LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQISDVSP 212 (308)
T ss_dssp SSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSCCCBCGG
T ss_pred CCccCcCcc--ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCccCcccc
Confidence 998887655 7888889999999998885 444 8888889999999998887655 3334 38889999998886554
Q ss_pred -cccccccceeecCCcCCC
Q 008121 241 -RELISIRTFIYDGNSFDN 258 (577)
Q Consensus 241 -~~l~~l~~l~~~~n~~~~ 258 (577)
..+.+++.|++++|++.+
T Consensus 213 l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 213 LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp GTTCTTCCEEEEEEEEEEC
T ss_pred ccCCCCCCEEEccCCeeec
Confidence 234466778888888754
No 328
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.78 E-value=9.8e-19 Score=161.35 Aligned_cols=135 Identities=21% Similarity=0.295 Sum_probs=82.3
Q ss_pred CCCCCCCccEEeeCCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCC
Q 008121 69 DPCGESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLP 146 (577)
Q Consensus 69 ~~c~~~w~gv~C~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p 146 (577)
+.|.|+|.+|.|+.. +++ .+|..+ .++|+.|+|++|+|++..+..+. ++|++|+|++|+|++..+
T Consensus 3 ~~C~C~~~~l~~~~~----------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 69 (177)
T 2o6r_A 3 SRCSCSGTEIRCNSK----------GLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPD 69 (177)
T ss_dssp TTCEEETTEEECCSS----------CCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCT
T ss_pred CCCEeCCCEEEecCC----------CCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeCh
Confidence 567778888877643 333 223222 25667777777777644333332 566666666666665555
Q ss_pred CCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccc
Q 008121 147 YSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGS 216 (577)
Q Consensus 147 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~ 216 (577)
..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..+..+++|++|+|++|.+.+.
T Consensus 70 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 70 GVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred hHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 5566666666666666666666666666666666666666666644444455666666666666665543
No 329
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.78 E-value=1.4e-18 Score=162.53 Aligned_cols=130 Identities=26% Similarity=0.351 Sum_probs=119.9
Q ss_pred CEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCC-CccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCc
Q 008121 110 RKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPY-SIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNN 188 (577)
Q Consensus 110 ~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 188 (577)
+.|++++|+|+ .+|..++.+|++|+|++|+|++..+. .|+.+++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 89 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 89 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred CEEEcCCCCcC-cCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCc
Confidence 78999999996 79988889999999999999987775 58999999999999999999999999999999999999999
Q ss_pred ccCCCCCCccCCCCCCeEEccCcccccccc-cCCCCC-ccEEEeecCccccccC
Q 008121 189 FSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSGLP-LTTLNVANNHFSGWIP 240 (577)
Q Consensus 189 l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~L~l~~N~l~g~~p 240 (577)
|++..|..|..+++|++|+|++|+|++.++ .+..++ |+.|+|++|.+++..+
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 90 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 999888889999999999999999999765 466665 9999999999998776
No 330
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.78 E-value=1.1e-18 Score=177.88 Aligned_cols=168 Identities=24% Similarity=0.289 Sum_probs=104.6
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCC--CcCCCCccCCCCccEE
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFS--GNLPYSIASMVSLSYL 158 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~--~~~p~~~~~l~~L~~L 158 (577)
.+++.|+|++|.++ .+|..+. ++|++|+|++|+|++..+..+. ++|++|+|++|.++ +..|..+..+ +|++|
T Consensus 102 ~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L 177 (332)
T 2ft3_A 102 RKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYL 177 (332)
T ss_dssp TTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCC
T ss_pred CCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEE
Confidence 46777888888777 4444444 6777777777777743332232 67777777777775 3566666666 66777
Q ss_pred EeccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccc-cCCCCC-ccEEEeecCccc
Q 008121 159 NVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSGLP-LTTLNVANNHFS 236 (577)
Q Consensus 159 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~L~l~~N~l~ 236 (577)
++++|++++ +|..+. ++|++|+|++|++++..|..|..+++|++|+|++|+|++.++ .+..++ |+.|++++|+|+
T Consensus 178 ~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 254 (332)
T 2ft3_A 178 RISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS 254 (332)
T ss_dssp BCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC
T ss_pred ECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe
Confidence 777776665 343332 566666666666666555666666666666666666666544 343333 666666666666
Q ss_pred cccCcccc---cccceeecCCcCCC
Q 008121 237 GWIPRELI---SIRTFIYDGNSFDN 258 (577)
Q Consensus 237 g~~p~~l~---~l~~l~~~~n~~~~ 258 (577)
.+|..+. +++.|++++|.+..
T Consensus 255 -~lp~~l~~l~~L~~L~l~~N~l~~ 278 (332)
T 2ft3_A 255 -RVPAGLPDLKLLQVVYLHTNNITK 278 (332)
T ss_dssp -BCCTTGGGCTTCCEEECCSSCCCB
T ss_pred -ecChhhhcCccCCEEECCCCCCCc
Confidence 5555443 34556666666543
No 331
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.78 E-value=5.7e-19 Score=193.27 Aligned_cols=176 Identities=25% Similarity=0.294 Sum_probs=139.8
Q ss_pred CcEEEEEcCCCCCcccc--cccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCC-CCccCCCCccE
Q 008121 83 SAVVSIDISGLGLSGTM--GYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLP-YSIASMVSLSY 157 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~--~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~ 157 (577)
..++.|+|++|.+++.. |..+..+++|++|+|++|++++..+. +. ++|++|++++|++++..| ..+.++++|++
T Consensus 347 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred CCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 56778888888887654 67788888888888888888754332 32 788888888888887766 56788888899
Q ss_pred EEeccCCCcccccccccCCCCCcEEeCcCCccc-CCCCCCccCCCCCCeEEccCcccccccc-cCCCCC-ccEEEeecCc
Q 008121 158 LNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFS-GDLPNSFISLSNISSLYLQNNQVTGSLN-VFSGLP-LTTLNVANNH 234 (577)
Q Consensus 158 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~L~l~~N~ 234 (577)
|+|++|++++.+|..|.++++|++|+|++|+++ +.+|..+..+++|++|+|++|++++.++ .+..++ |+.|++++|+
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 505 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQ 505 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCc
Confidence 999999888888888888888999999998887 5788888888889999999988888744 565555 8889999998
Q ss_pred cccccCcccc---cccceeecCCcCCCC
Q 008121 235 FSGWIPRELI---SIRTFIYDGNSFDNG 259 (577)
Q Consensus 235 l~g~~p~~l~---~l~~l~~~~n~~~~~ 259 (577)
+++..|..+. +++.+++++|++.|.
T Consensus 506 l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 533 (570)
T 2z63_A 506 LKSVPDGIFDRLTSLQKIWLHTNPWDCS 533 (570)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCCCHHHhhcccCCcEEEecCCcccCC
Confidence 8877766554 566778888887654
No 332
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.77 E-value=2.1e-18 Score=171.02 Aligned_cols=169 Identities=20% Similarity=0.200 Sum_probs=143.5
Q ss_pred EEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEEeccCC
Q 008121 87 SIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNS 164 (577)
Q Consensus 87 ~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 164 (577)
.++..+.++. .+|..+. ++|++|+|++|+|++..+..+. ++|++|+|++|++++..+..|.++++|++|+|++|+
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 4677887776 4555543 5799999999999976665554 899999999999998888899999999999999999
Q ss_pred CcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccc--cccCCCCC-ccEEEeecCccccccCc
Q 008121 165 LTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGS--LNVFSGLP-LTTLNVANNHFSGWIPR 241 (577)
Q Consensus 165 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~--~~~~~~~~-L~~L~l~~N~l~g~~p~ 241 (577)
+++..+..|.++++|++|+|++|++++..+..+..+++|++|+|++|++++. +..+..++ |+.|++++|++++..+.
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~ 167 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred cCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHH
Confidence 9999999999999999999999999987777899999999999999999873 44566655 99999999999987776
Q ss_pred cccc---cc----ceeecCCcCCC
Q 008121 242 ELIS---IR----TFIYDGNSFDN 258 (577)
Q Consensus 242 ~l~~---l~----~l~~~~n~~~~ 258 (577)
.+.. ++ .+++++|.+..
T Consensus 168 ~~~~l~~L~~l~l~L~ls~n~l~~ 191 (276)
T 2z62_A 168 DLRVLHQMPLLNLSLDLSLNPMNF 191 (276)
T ss_dssp GGHHHHTCTTCCEEEECCSSCCCE
T ss_pred HhhhhhhccccceeeecCCCcccc
Confidence 6654 33 67788888753
No 333
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=5.6e-19 Score=182.31 Aligned_cols=168 Identities=24% Similarity=0.246 Sum_probs=145.1
Q ss_pred CCCCCCCccEEeeC-----------CcEEEEEcCCCCCccccccccc-CCCCCCEEEccCCCcCCcCCCCCC--CCccEE
Q 008121 69 DPCGESWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLS-DLLSLRKFDLSGNSIHDTIPYQLP--PNLTSL 134 (577)
Q Consensus 69 ~~c~~~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L 134 (577)
..|.|.+..|.|.. ..++.|+|++|+|++..+..+. ++++|+.|+|++|+|++..|..+. ++|++|
T Consensus 14 ~~C~C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L 93 (361)
T 2xot_A 14 ANCLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYL 93 (361)
T ss_dssp TTCEEETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCCEECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEE
Confidence 45777899999975 2478999999999998888888 999999999999999976665565 899999
Q ss_pred EccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcccCCCCCC-c---cCCCCCCeEEccC
Q 008121 135 NLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNS-F---ISLSNISSLYLQN 210 (577)
Q Consensus 135 ~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~---~~l~~L~~L~l~~ 210 (577)
+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++ +|.. | ..+++|+.|+|++
T Consensus 94 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~~~~l~~L~~L~L~~ 172 (361)
T 2xot_A 94 DLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FPVELIKDGNKLPKLMLLDLSS 172 (361)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS-CCGGGTC----CTTCCEEECCS
T ss_pred ECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe-eCHHHhcCcccCCcCCEEECCC
Confidence 999999998888899999999999999999999999999999999999999999995 5554 4 5799999999999
Q ss_pred cccccccc-cCCCCC---ccEEEeecCcccc
Q 008121 211 NQVTGSLN-VFSGLP---LTTLNVANNHFSG 237 (577)
Q Consensus 211 N~l~~~~~-~~~~~~---L~~L~l~~N~l~g 237 (577)
|+|++.+. .+..++ ++.|+|++|.+..
T Consensus 173 N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 173 NKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp SCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred CCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 99998653 344444 5889999999974
No 334
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.77 E-value=1.4e-18 Score=192.45 Aligned_cols=180 Identities=21% Similarity=0.223 Sum_probs=141.2
Q ss_pred CCCCCCCCCCCCCCCCCccEEeeCCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEc
Q 008121 59 VLTNWKGNEGDPCGESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNL 136 (577)
Q Consensus 59 ~l~~w~~~~~~~c~~~w~gv~C~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l 136 (577)
.+..|.. .-|. .|..-.|..... +.+.++.+|+ .+|..+. +++++|||++|+|++..|..|. ++|++|||
T Consensus 12 ~~~~~~~--~~p~--~~~~c~~~~~~~-~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~L 83 (635)
T 4g8a_A 12 KLAAANS--SIPE--SWEPCVEVVPNI-TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDL 83 (635)
T ss_dssp -----------------CCSEEEETTT-EEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred hhhcccC--CCCC--CCCCccccCCCC-EEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEEC
Confidence 4666763 3455 587655554433 4689999998 4565443 4799999999999966566665 89999999
Q ss_pred cCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccc
Q 008121 137 ASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGS 216 (577)
Q Consensus 137 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~ 216 (577)
++|+|++..|++|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|+++++|++|+|++|.|++.
T Consensus 84 s~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~ 163 (635)
T 4g8a_A 84 SRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF 163 (635)
T ss_dssp TTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC
T ss_pred CCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccC
Confidence 99999998889999999999999999999998889999999999999999999987777899999999999999999874
Q ss_pred -c-ccCCCCC-ccEEEeecCccccccCcccccc
Q 008121 217 -L-NVFSGLP-LTTLNVANNHFSGWIPRELISI 246 (577)
Q Consensus 217 -~-~~~~~~~-L~~L~l~~N~l~g~~p~~l~~l 246 (577)
+ ..+..++ |+.|++++|+|++..|..+..+
T Consensus 164 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L 196 (635)
T 4g8a_A 164 KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVL 196 (635)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCEECGGGGHHH
T ss_pred CCchhhccchhhhhhcccCccccccccccccch
Confidence 3 3455554 9999999999998888776644
No 335
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.77 E-value=1.3e-18 Score=190.43 Aligned_cols=173 Identities=20% Similarity=0.218 Sum_probs=151.3
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEEe
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 160 (577)
..++.|+|++|++++..+..|.++++|++|||++|++++..|..+. ++|++|+|++|++++..|..|+++++|++|+|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 4689999999999999999999999999999999999976666565 89999999999999988899999999999999
Q ss_pred ccCCCcccccccccCCCCCcEEeCcCCcccC-CCCCCccCCCCCCeEEccCcccccccc-cCCCCC-c----cEEEeecC
Q 008121 161 SRNSLTQSIGDIFGNLAGLATLDLSFNNFSG-DLPNSFISLSNISSLYLQNNQVTGSLN-VFSGLP-L----TTLNVANN 233 (577)
Q Consensus 161 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L----~~L~l~~N 233 (577)
++|++++..+..|+++++|++|+|++|++++ .+|..|+++++|++|++++|++++.++ .+..+. | ..|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 9999998877789999999999999999997 479999999999999999999998654 233222 4 78999999
Q ss_pred ccccccCcccc--cccceeecCCc
Q 008121 234 HFSGWIPRELI--SIRTFIYDGNS 255 (577)
Q Consensus 234 ~l~g~~p~~l~--~l~~l~~~~n~ 255 (577)
.+++..|..+. +++.+++.+|.
T Consensus 188 ~l~~~~~~~~~~~~L~~L~l~~n~ 211 (570)
T 2z63_A 188 PMNFIQPGAFKEIRLHKLTLRNNF 211 (570)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCC
T ss_pred CceecCHHHhccCcceeEeccccc
Confidence 99988777665 46677777763
No 336
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.77 E-value=3.9e-18 Score=175.37 Aligned_cols=176 Identities=26% Similarity=0.313 Sum_probs=148.3
Q ss_pred ccEEeeCCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCC
Q 008121 76 KGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMV 153 (577)
Q Consensus 76 ~gv~C~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~ 153 (577)
....|....+ .++++++++ .+|..+. ++|++|+|++|+|++..+..+. ++|++|+|++|++++..|..|++++
T Consensus 26 ~~~~C~~~~~--c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 100 (353)
T 2z80_A 26 ASLSCDRNGI--CKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLG 100 (353)
T ss_dssp -CCEECTTSE--EECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred cCCCCCCCeE--eeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCC
Confidence 4578887666 899999998 4565554 4899999999999965554554 8999999999999998899999999
Q ss_pred CccEEEeccCCCcccccccccCCCCCcEEeCcCCcccCCCCC--CccCCCCCCeEEccCcc-cccccc-cCCCCC-ccEE
Q 008121 154 SLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPN--SFISLSNISSLYLQNNQ-VTGSLN-VFSGLP-LTTL 228 (577)
Q Consensus 154 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~l~~N~-l~~~~~-~~~~~~-L~~L 228 (577)
+|++|+|++|++++..+..|.++++|++|+|++|++++ +|. .|..+++|++|++++|+ +.+..+ .+..++ |+.|
T Consensus 101 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L 179 (353)
T 2z80_A 101 SLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEEL 179 (353)
T ss_dssp TCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEE
T ss_pred CCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEE
Confidence 99999999999998777779999999999999999995 555 78999999999999995 666544 466665 9999
Q ss_pred EeecCccccccCccccc---ccceeecCCcCC
Q 008121 229 NVANNHFSGWIPRELIS---IRTFIYDGNSFD 257 (577)
Q Consensus 229 ~l~~N~l~g~~p~~l~~---l~~l~~~~n~~~ 257 (577)
++++|++++..|..+.+ ++.|++++|.+.
T Consensus 180 ~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 211 (353)
T 2z80_A 180 EIDASDLQSYEPKSLKSIQNVSHLILHMKQHI 211 (353)
T ss_dssp EEEETTCCEECTTTTTTCSEEEEEEEECSCST
T ss_pred ECCCCCcCccCHHHHhccccCCeecCCCCccc
Confidence 99999999988887764 566778888753
No 337
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.76 E-value=4.4e-18 Score=184.71 Aligned_cols=155 Identities=21% Similarity=0.336 Sum_probs=130.8
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEecc
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (577)
.+++.|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +..+|++|+|++|+|++ +|. .+++|+.|+|++
T Consensus 80 ~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~ 149 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPASLKHLDVDNNQLTM-LPE---LPALLEYINADN 149 (571)
T ss_dssp TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCS
T ss_pred CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhcCCCEEECCCCcCCC-CCC---cCccccEEeCCC
Confidence 57999999999999 566 568999999999999997 887 77799999999999997 676 689999999999
Q ss_pred CCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccccCCCCCc-------cEEEeecCcc
Q 008121 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPL-------TTLNVANNHF 235 (577)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L-------~~L~l~~N~l 235 (577)
|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|+|+..+. +.. .| +.|+|++|+|
T Consensus 150 N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~lp~-~~~-~L~~~~~~L~~L~Ls~N~l 219 (571)
T 3cvr_A 150 NQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLESLPA-VPV-RNHHSEETEIFFRCRENRI 219 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSSCCC-CC---------CCEEEECCSSCC
T ss_pred CccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCchhh-HHH-hhhcccccceEEecCCCcc
Confidence 99997 565 67899999999999996 787 66 899999999999996655 444 56 9999999999
Q ss_pred ccccCcccc---cccceeecCCcCCC
Q 008121 236 SGWIPRELI---SIRTFIYDGNSFDN 258 (577)
Q Consensus 236 ~g~~p~~l~---~l~~l~~~~n~~~~ 258 (577)
+ .+|..+. ++..|++++|++.+
T Consensus 220 ~-~lp~~l~~l~~L~~L~L~~N~l~~ 244 (571)
T 3cvr_A 220 T-HIPENILSLDPTCTIILEDNPLSS 244 (571)
T ss_dssp C-CCCGGGGGSCTTEEEECCSSSCCH
T ss_pred e-ecCHHHhcCCCCCEEEeeCCcCCC
Confidence 9 6887655 55678899998864
No 338
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.76 E-value=3.7e-18 Score=170.69 Aligned_cols=166 Identities=22% Similarity=0.298 Sum_probs=127.8
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEecc
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (577)
.+++.|++++|.++.. +.+..+++|++|+|++|+|++..|..-.++|++|+|++|++++ +| .+..+++|++|+|++
T Consensus 46 ~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~ 121 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEH 121 (291)
T ss_dssp HTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTT
T ss_pred CcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcccccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCC
Confidence 4678888888888755 3488888889999999888875553333888889999888886 33 388888889999999
Q ss_pred CCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccccCCCCC-ccEEEeecCccccccCc
Q 008121 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP-LTTLNVANNHFSGWIPR 241 (577)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~L~l~~N~l~g~~p~ 241 (577)
|++++. +.+..+++|+.|+|++|++++. ..+..+++|++|+|++|+|++..+ +..++ |+.|++++|.|++ +|.
T Consensus 122 n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~i~~-l~~ 195 (291)
T 1h6t_A 122 NGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISD-LRA 195 (291)
T ss_dssp SCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCB-CGG
T ss_pred CcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCcCCC-Chh
Confidence 988874 4577888889999999888854 568888888999999888888766 54444 8888999888885 342
Q ss_pred --ccccccceeecCCcCCC
Q 008121 242 --ELISIRTFIYDGNSFDN 258 (577)
Q Consensus 242 --~l~~l~~l~~~~n~~~~ 258 (577)
.+.+++.|++++|++..
T Consensus 196 l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 196 LAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp GTTCTTCSEEEEEEEEEEC
T ss_pred hccCCCCCEEECcCCcccC
Confidence 34466777888887654
No 339
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.76 E-value=4.3e-18 Score=185.52 Aligned_cols=174 Identities=25% Similarity=0.305 Sum_probs=150.5
Q ss_pred EEeeCCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCc
Q 008121 78 VACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSL 155 (577)
Q Consensus 78 v~C~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L 155 (577)
..|....+ .++++++++ .+|..+. ++|++|+|++|+|++..|..+. ++|++|+|++|++++..|..|+++++|
T Consensus 2 ~~C~~~~~--c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L 76 (549)
T 2z81_A 2 LSCDASGV--CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSL 76 (549)
T ss_dssp CEECTTSE--EECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred ccCCCCce--EECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccC
Confidence 36877776 799999998 5565554 7999999999999987777765 899999999999999999999999999
Q ss_pred cEEEeccCCCcccccccccCCCCCcEEeCcCCcccC-CCCCCccCCCCCCeEEccCcccccccc--cCCCCC-ccEEEee
Q 008121 156 SYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSG-DLPNSFISLSNISSLYLQNNQVTGSLN--VFSGLP-LTTLNVA 231 (577)
Q Consensus 156 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~~~~-L~~L~l~ 231 (577)
++|+|++|++++..|..|+++++|++|+|++|++++ .+|..++++++|++|++++|.+.+.++ .+..++ |+.|+++
T Consensus 77 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~ 156 (549)
T 2z81_A 77 EHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIK 156 (549)
T ss_dssp CEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEE
T ss_pred CEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeecc
Confidence 999999999999999889999999999999999996 367889999999999999999554443 566666 9999999
Q ss_pred cCccccccCccccc---ccceeecCCcC
Q 008121 232 NNHFSGWIPRELIS---IRTFIYDGNSF 256 (577)
Q Consensus 232 ~N~l~g~~p~~l~~---l~~l~~~~n~~ 256 (577)
+|.+++.+|..+.. ++.|.+.+|..
T Consensus 157 ~n~l~~~~~~~l~~l~~L~~L~l~~n~~ 184 (549)
T 2z81_A 157 ALSLRNYQSQSLKSIRDIHHLTLHLSES 184 (549)
T ss_dssp ETTCCEECTTTTTTCSEEEEEEEECSBS
T ss_pred CCcccccChhhhhccccCceEecccCcc
Confidence 99999999987765 45677777764
No 340
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.76 E-value=5e-18 Score=183.83 Aligned_cols=149 Identities=21% Similarity=0.263 Sum_probs=117.8
Q ss_pred CCCEEEccCCCcCCcCCCCC-----C--CCccEEEccCCcC--------------------------CCcCCCCccCCCC
Q 008121 108 SLRKFDLSGNSIHDTIPYQL-----P--PNLTSLNLASNNF--------------------------SGNLPYSIASMVS 154 (577)
Q Consensus 108 ~L~~L~Ls~N~l~~~~p~~~-----~--~~L~~L~l~~N~l--------------------------~~~~p~~~~~l~~ 154 (577)
+|++|+|++|+++|.+|..+ . ++|+.|++++|.+ .+.. .+..+++
T Consensus 248 ~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~ 325 (520)
T 2z7x_B 248 TVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISP 325 (520)
T ss_dssp SCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCC
T ss_pred cccEEEeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCcccccc--chhhCCc
Confidence 56677777777777777655 2 3333444444333 2111 0167899
Q ss_pred ccEEEeccCCCcccccccccCCCCCcEEeCcCCcccC--CCCCCccCCCCCCeEEccCcccccccc--cCCCCC-ccEEE
Q 008121 155 LSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSG--DLPNSFISLSNISSLYLQNNQVTGSLN--VFSGLP-LTTLN 229 (577)
Q Consensus 155 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~~~~-L~~L~ 229 (577)
|++|+|++|++++.+|..+.++++|++|+|++|++++ .+|..+..+++|++|+|++|.+++.++ .+..++ |+.|+
T Consensus 326 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~ 405 (520)
T 2z7x_B 326 FLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLN 405 (520)
T ss_dssp CCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEE
T ss_pred ccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEE
Confidence 9999999999999999999999999999999999996 566789999999999999999998443 355554 99999
Q ss_pred eecCccccccCccc-ccccceeecCCcCCC
Q 008121 230 VANNHFSGWIPREL-ISIRTFIYDGNSFDN 258 (577)
Q Consensus 230 l~~N~l~g~~p~~l-~~l~~l~~~~n~~~~ 258 (577)
+++|++++.+|..+ .+++.|++++|.+..
T Consensus 406 Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~~ 435 (520)
T 2z7x_B 406 MSSNILTDTIFRCLPPRIKVLDLHSNKIKS 435 (520)
T ss_dssp CCSSCCCGGGGGSCCTTCCEEECCSSCCCC
T ss_pred CcCCCCCcchhhhhcccCCEEECCCCcccc
Confidence 99999999999888 589999999998863
No 341
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.75 E-value=8.6e-18 Score=169.44 Aligned_cols=169 Identities=23% Similarity=0.335 Sum_probs=142.7
Q ss_pred CCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEec
Q 008121 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (577)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (577)
..+++.|++++|+++. ++ .+..+++|++|+|++|++++..+..-.++|++|+|++|++++. | .+..+++|++|+|+
T Consensus 40 l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~l~ 115 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNV-S-AIAGLQSIKTLDLT 115 (308)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGGGTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCEEECT
T ss_pred cCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChhHccCCCCCEEEccCCcCCCc-h-hhcCCCCCCEEECC
Confidence 3578999999999986 44 6899999999999999999755533338999999999999964 4 68999999999999
Q ss_pred cCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccccCCCCC-ccEEEeecCccccccC
Q 008121 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP-LTTLNVANNHFSGWIP 240 (577)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~L~l~~N~l~g~~p 240 (577)
+|++++..+ +..+++|++|+|++|++++. +. +..+++|++|+|++|++++..+ +..++ |+.|++++|++++..+
T Consensus 116 ~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~ 190 (308)
T 1h6u_A 116 STQITDVTP--LAGLSNLQVLYLDLNQITNI-SP-LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNKISDISP 190 (308)
T ss_dssp TSCCCCCGG--GTTCTTCCEEECCSSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG
T ss_pred CCCCCCchh--hcCCCCCCEEECCCCccCcC-cc-ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCccCcChh
Confidence 999997543 89999999999999999964 43 8899999999999999998666 55554 9999999999997554
Q ss_pred -cccccccceeecCCcCCCC
Q 008121 241 -RELISIRTFIYDGNSFDNG 259 (577)
Q Consensus 241 -~~l~~l~~l~~~~n~~~~~ 259 (577)
..+.+++.|++++|.+...
T Consensus 191 l~~l~~L~~L~L~~N~l~~~ 210 (308)
T 1h6u_A 191 LASLPNLIEVHLKNNQISDV 210 (308)
T ss_dssp GGGCTTCCEEECTTSCCCBC
T ss_pred hcCCCCCCEEEccCCccCcc
Confidence 3455788899999987643
No 342
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.74 E-value=5.7e-18 Score=158.57 Aligned_cols=113 Identities=27% Similarity=0.456 Sum_probs=54.2
Q ss_pred CCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCC
Q 008121 123 IPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSN 202 (577)
Q Consensus 123 ~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~ 202 (577)
+|..++++|++|+|++|+|+ .+|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|..+++
T Consensus 25 ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~ 103 (193)
T 2wfh_A 25 LPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKS 103 (193)
T ss_dssp CCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTT
T ss_pred CCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCC
Confidence 33333344444444444444 34444445555555555555555444444555555555555555555444444555555
Q ss_pred CCeEEccCcccccccc-cCCCCC-ccEEEeecCccc
Q 008121 203 ISSLYLQNNQVTGSLN-VFSGLP-LTTLNVANNHFS 236 (577)
Q Consensus 203 L~~L~l~~N~l~~~~~-~~~~~~-L~~L~l~~N~l~ 236 (577)
|++|+|++|+|++.++ .+..++ |+.|+|++|.+.
T Consensus 104 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 104 LRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 5555555555554333 233332 555555555554
No 343
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.74 E-value=1.5e-17 Score=155.60 Aligned_cols=126 Identities=26% Similarity=0.277 Sum_probs=110.8
Q ss_pred EEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEEeccCC
Q 008121 87 SIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNS 164 (577)
Q Consensus 87 ~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 164 (577)
.+++++|+|+ .+|..+. .+|++|+|++|+|+ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4566677777 4555543 58999999999998 6776664 899999999999999989999999999999999999
Q ss_pred CcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccc
Q 008121 165 LTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGS 216 (577)
Q Consensus 165 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~ 216 (577)
|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|.+...
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 9999999999999999999999999976666799999999999999998753
No 344
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.74 E-value=6.4e-18 Score=173.57 Aligned_cols=190 Identities=20% Similarity=0.176 Sum_probs=151.1
Q ss_pred CCCCCCccEEeeC-----------CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC---CCcc-EE
Q 008121 70 PCGESWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP---PNLT-SL 134 (577)
Q Consensus 70 ~c~~~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~~L~-~L 134 (577)
.|.|+|..|.|++ ..++.|+|++|+|+...+.+|.+|++|++|+|++|++.+.+|.... ++|+ .+
T Consensus 6 ~C~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l 85 (350)
T 4ay9_X 6 ICHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIR 85 (350)
T ss_dssp SSEEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEE
T ss_pred ccEeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhh
Confidence 3778999999975 2578999999999977677899999999999999999888886542 4544 57
Q ss_pred EccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcC-CcccCCCCCCccCCC-CCCeEEccCcc
Q 008121 135 NLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSF-NNFSGDLPNSFISLS-NISSLYLQNNQ 212 (577)
Q Consensus 135 ~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~-~L~~L~l~~N~ 212 (577)
++++|+++...|+.|..+++|++|++++|+|++..+..+....++..|++.+ |++....+..|..+. .++.|+|++|+
T Consensus 86 ~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~ 165 (350)
T 4ay9_X 86 IEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNG 165 (350)
T ss_dssp EEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSC
T ss_pred cccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccc
Confidence 7888999988899999999999999999999988887777788888898865 677755555676664 58889999999
Q ss_pred ccccccc-CCCCCccEEEeecCccccccCc-c---cccccceeecCCcCCCC
Q 008121 213 VTGSLNV-FSGLPLTTLNVANNHFSGWIPR-E---LISIRTFIYDGNSFDNG 259 (577)
Q Consensus 213 l~~~~~~-~~~~~L~~L~l~~N~l~g~~p~-~---l~~l~~l~~~~n~~~~~ 259 (577)
|+...+. +...+|+.|++++|+..+.+|. . +.+++.|++++|.+..-
T Consensus 166 i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~l 217 (350)
T 4ay9_X 166 IQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSL 217 (350)
T ss_dssp CCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCC
T ss_pred ccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCcc
Confidence 9886654 5555688899886444446664 2 34677888888887643
No 345
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.73 E-value=8.4e-18 Score=183.92 Aligned_cols=172 Identities=23% Similarity=0.264 Sum_probs=118.6
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCC--cCCCCccCCCCccEE
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSG--NLPYSIASMVSLSYL 158 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L 158 (577)
.+++.|++++|++.... .+..+++|++|+|++|++++.+|..+. ++|++|+|++|++++ .+|..|+++++|++|
T Consensus 331 ~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L 408 (562)
T 3a79_B 331 MNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETL 408 (562)
T ss_dssp CCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEE
T ss_pred CcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEE
Confidence 34777777777775322 126777778888888887776776654 677888888887775 334667777788888
Q ss_pred EeccCCCcccccc-cccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccccCCCCC-ccEEEeecCccc
Q 008121 159 NVSRNSLTQSIGD-IFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP-LTTLNVANNHFS 236 (577)
Q Consensus 159 ~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~L~l~~N~l~ 236 (577)
+|++|++++.+|. .+..+++|++|+|++|+|++.+|..+. ++|++|+|++|+|+..++.+..++ |+.|+|++|+|+
T Consensus 409 ~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~ 486 (562)
T 3a79_B 409 DVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLK 486 (562)
T ss_dssp ECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCC
T ss_pred ECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCC
Confidence 8888887774443 477777788888888877776666554 577788888887776555444444 777888888877
Q ss_pred cccCcc-cc---cccceeecCCcCCCC
Q 008121 237 GWIPRE-LI---SIRTFIYDGNSFDNG 259 (577)
Q Consensus 237 g~~p~~-l~---~l~~l~~~~n~~~~~ 259 (577)
.+|.. +. +++.+++++|++.|.
T Consensus 487 -~l~~~~~~~l~~L~~L~l~~N~~~c~ 512 (562)
T 3a79_B 487 -SVPDGVFDRLTSLQYIWLHDNPWDCT 512 (562)
T ss_dssp -CCCTTSTTTCTTCCCEECCSCCBCCC
T ss_pred -CCCHHHHhcCCCCCEEEecCCCcCCC
Confidence 45543 33 455677777777653
No 346
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.73 E-value=3.4e-17 Score=173.98 Aligned_cols=161 Identities=22% Similarity=0.329 Sum_probs=120.2
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEecc
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (577)
.+++.|+|++|++++ +| .|+++++|++|+|++|++++ +|... ++|++|+|++|++++ +| .++++++|++|++++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~-~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~ 204 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP-PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADN 204 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC-TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCS
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc-ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCC
Confidence 467777888888776 55 58888888888888888875 56543 688888888888886 55 578888888888888
Q ss_pred CCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccccCCCCCccEEEeecCccccccCcc
Q 008121 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPRE 242 (577)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~~p~~ 242 (577)
|++++ +|.. .++|++|++++|+++ .+|. ++.+++|++|++++|++++.+... ..|+.|++++|++++ +|..
T Consensus 205 N~l~~-l~~~---~~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~l~~~~--~~L~~L~l~~N~l~~-l~~~ 275 (454)
T 1jl5_A 205 NSLKK-LPDL---PLSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKTLPDLP--PSLEALNVRDNYLTD-LPEL 275 (454)
T ss_dssp SCCSS-CCCC---CTTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSSCCSCC--TTCCEEECCSSCCSC-CCCC
T ss_pred CcCCc-CCCC---cCcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCcccccc--cccCEEECCCCcccc-cCcc
Confidence 88886 4433 257888888888887 6774 778888888888888888754322 347888888888885 6766
Q ss_pred cccccceeecCCcCCC
Q 008121 243 LISIRTFIYDGNSFDN 258 (577)
Q Consensus 243 l~~l~~l~~~~n~~~~ 258 (577)
+.+++.|++++|.+..
T Consensus 276 ~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 276 PQSLTFLDVSENIFSG 291 (454)
T ss_dssp CTTCCEEECCSSCCSE
T ss_pred cCcCCEEECcCCccCc
Confidence 6777888888887654
No 347
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.73 E-value=2.5e-18 Score=173.48 Aligned_cols=177 Identities=20% Similarity=0.221 Sum_probs=148.2
Q ss_pred eeCCcEEEEEcCCCCCccccc----ccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCc--C--CCCc
Q 008121 80 CEGSAVVSIDISGLGLSGTMG----YLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGN--L--PYSI 149 (577)
Q Consensus 80 C~~~~v~~l~l~~~~l~g~~~----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~--~--p~~~ 149 (577)
.....++.|+|++|.+++..+ ..+..+++|++|+|++|+|++..|..+. ++|++|+|++|++.+. + +..+
T Consensus 114 ~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 193 (310)
T 4glp_A 114 ATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCP 193 (310)
T ss_dssp CCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCT
T ss_pred ccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhh
Confidence 345679999999999998665 4566899999999999999987776664 8999999999998763 2 2345
Q ss_pred cCCCCccEEEeccCCCccccc--c-cccCCCCCcEEeCcCCcccCCCCCCccCC---CCCCeEEccCcccccccccCCCC
Q 008121 150 ASMVSLSYLNVSRNSLTQSIG--D-IFGNLAGLATLDLSFNNFSGDLPNSFISL---SNISSLYLQNNQVTGSLNVFSGL 223 (577)
Q Consensus 150 ~~l~~L~~L~L~~N~l~~~~p--~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l---~~L~~L~l~~N~l~~~~~~~~~~ 223 (577)
+.+++|++|+|++|+++...+ . .+.++++|++|+|++|+|++..|..+..+ ++|++|+|++|+|+..+..+. .
T Consensus 194 ~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~-~ 272 (310)
T 4glp_A 194 HKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLP-A 272 (310)
T ss_dssp TSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSCCSCCC-S
T ss_pred hcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCchhhhhc-C
Confidence 789999999999999984322 2 35789999999999999998889888877 699999999999996655443 5
Q ss_pred CccEEEeecCcccc-ccCcccccccceeecCCcCC
Q 008121 224 PLTTLNVANNHFSG-WIPRELISIRTFIYDGNSFD 257 (577)
Q Consensus 224 ~L~~L~l~~N~l~g-~~p~~l~~l~~l~~~~n~~~ 257 (577)
.|+.|+|++|+|++ +.+..+.+++.|++++|++.
T Consensus 273 ~L~~L~Ls~N~l~~~~~~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 273 KLRVLDLSSNRLNRAPQPDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CCSCEECCSCCCCSCCCTTSCCCCSCEECSSTTTS
T ss_pred CCCEEECCCCcCCCCchhhhCCCccEEECcCCCCC
Confidence 69999999999998 56778889999999999975
No 348
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.73 E-value=2.3e-17 Score=152.11 Aligned_cols=131 Identities=21% Similarity=0.298 Sum_probs=118.7
Q ss_pred CCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCc
Q 008121 109 LRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNN 188 (577)
Q Consensus 109 L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 188 (577)
.+.+++++|+++ .+|..+.++|++|+|++|++++..+..|+.+++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 87 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENK 87 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCEEEecCCCCc-cCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCC
Confidence 578999999998 6888888999999999999998888889999999999999999998888889999999999999999
Q ss_pred ccCCCCCCccCCCCCCeEEccCccccccccc-CCCCC-ccEEEeecCccccccC
Q 008121 189 FSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSGLP-LTTLNVANNHFSGWIP 240 (577)
Q Consensus 189 l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~L~l~~N~l~g~~p 240 (577)
|++..+..|..+++|++|+|++|+|++.++. +..++ |+.|++++|.+++..|
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 88 LQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 9987777789999999999999999987764 45554 9999999999998766
No 349
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.73 E-value=3.2e-18 Score=173.31 Aligned_cols=169 Identities=17% Similarity=0.201 Sum_probs=142.6
Q ss_pred CCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEec
Q 008121 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (577)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (577)
...++.|+|++|.+++.. .+++|++|+|++|+|++..+.. .++|++|+|++|++++..|..++.+++|++|+|+
T Consensus 79 l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~-~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls 152 (317)
T 3o53_A 79 LSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCSR-GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLK 152 (317)
T ss_dssp CTTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEECC-CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECT
T ss_pred cCCCCEEECcCCcccccc-----CCCCcCEEECCCCccCCcCccc-cCCCCEEECCCCCCCCccchhhhccCCCCEEECC
Confidence 468999999999998654 3489999999999999655544 4889999999999999888899999999999999
Q ss_pred cCCCcccccccc-cCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccccCCCCC-ccEEEeecCcccccc
Q 008121 162 RNSLTQSIGDIF-GNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP-LTTLNVANNHFSGWI 239 (577)
Q Consensus 162 ~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~L~l~~N~l~g~~ 239 (577)
+|++++..|..+ ..+++|++|+|++|+|++. |. ...+++|++|+|++|+|++.++.+..++ |+.|++++|+|+ .+
T Consensus 153 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~-~l 229 (317)
T 3o53_A 153 LNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV-LI 229 (317)
T ss_dssp TSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC-EE
T ss_pred CCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc-ch
Confidence 999999888777 4799999999999999954 43 3358999999999999999877666655 999999999999 56
Q ss_pred Cccc---ccccceeecCCcCCCC
Q 008121 240 PREL---ISIRTFIYDGNSFDNG 259 (577)
Q Consensus 240 p~~l---~~l~~l~~~~n~~~~~ 259 (577)
|..+ .+++.+++++|++.|.
T Consensus 230 ~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 230 EKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp CTTCCCCTTCCEEECTTCCCBHH
T ss_pred hhHhhcCCCCCEEEccCCCccCc
Confidence 7655 4677889999998743
No 350
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.73 E-value=2.3e-17 Score=176.17 Aligned_cols=165 Identities=28% Similarity=0.426 Sum_probs=80.5
Q ss_pred EEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEeccCC
Q 008121 85 VVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNS 164 (577)
Q Consensus 85 v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 164 (577)
++.|+|++|.+++. +.+..+++|+.|+|++|++++..|..-.++|++|+|++|++++..+ +..+++|+.|+|++|+
T Consensus 223 L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~ 298 (466)
T 1o6v_A 223 LDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQ 298 (466)
T ss_dssp CCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSC
T ss_pred CCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchhhhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCc
Confidence 34444444444332 2344444555555555555443332222455555555555554333 4555555555555555
Q ss_pred CcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccccCCCCC-ccEEEeecCccccccC-cc
Q 008121 165 LTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP-LTTLNVANNHFSGWIP-RE 242 (577)
Q Consensus 165 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~L~l~~N~l~g~~p-~~ 242 (577)
+++..| +..+++|+.|+|++|++++..| +..+++|++|++++|++++. +.+..++ |+.|++++|++++..| ..
T Consensus 299 l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~~~~~~~ 373 (466)
T 1o6v_A 299 LEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQISDLTPLAN 373 (466)
T ss_dssp CSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCBCGGGTT
T ss_pred ccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCCccCccchhhc
Confidence 554433 4455555555555555554433 44555555555555555554 2233332 5566666666655554 22
Q ss_pred cccccceeecCCcCCC
Q 008121 243 LISIRTFIYDGNSFDN 258 (577)
Q Consensus 243 l~~l~~l~~~~n~~~~ 258 (577)
+.+++.|.+++|++..
T Consensus 374 l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 374 LTRITQLGLNDQAWTN 389 (466)
T ss_dssp CTTCCEEECCCEEEEC
T ss_pred CCCCCEEeccCCcccC
Confidence 3344455555555543
No 351
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.73 E-value=2.2e-17 Score=165.06 Aligned_cols=147 Identities=24% Similarity=0.336 Sum_probs=128.2
Q ss_pred CCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEec
Q 008121 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (577)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (577)
..+++.|+|++|++++..+ ++.+++|+.|+|++|+|++..+..-.++|++|+|++|++++. ..+..+++|+.|+|+
T Consensus 67 l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~ 142 (291)
T 1h6t_A 67 LPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLG 142 (291)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCGGGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECC
T ss_pred CCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCChhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEcc
Confidence 4689999999999998765 999999999999999999633322238999999999999974 468999999999999
Q ss_pred cCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccccCCCCC-ccEEEeecCcccc
Q 008121 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP-LTTLNVANNHFSG 237 (577)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~L~l~~N~l~g 237 (577)
+|++++. ..+..+++|++|+|++|++++..| +..+++|++|+|++|.|++... +..++ |+.|++++|+++.
T Consensus 143 ~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l~~-l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 143 NNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDLRA-LAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp SSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBCGG-GTTCTTCSEEEEEEEEEEC
T ss_pred CCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCChh-hccCCCCCEEECcCCcccC
Confidence 9999986 578999999999999999997554 8999999999999999998644 55554 9999999999985
No 352
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.72 E-value=8.1e-18 Score=153.69 Aligned_cols=132 Identities=22% Similarity=0.258 Sum_probs=80.7
Q ss_pred CcEEEEEcCCCCCc-ccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEE
Q 008121 83 SAVVSIDISGLGLS-GTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (577)
Q Consensus 83 ~~v~~l~l~~~~l~-g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 159 (577)
.+++.|+|++|+++ +.+|..+..+++|+.|+|++|+|++. ..+. ++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 35666677777766 56666666666777777777766644 2222 5666666666666665565555566666666
Q ss_pred eccCCCcccc-cccccCCCCCcEEeCcCCcccCCCC---CCccCCCCCCeEEccCcccccc
Q 008121 160 VSRNSLTQSI-GDIFGNLAGLATLDLSFNNFSGDLP---NSFISLSNISSLYLQNNQVTGS 216 (577)
Q Consensus 160 L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~g~~p---~~~~~l~~L~~L~l~~N~l~~~ 216 (577)
|++|+|++.. +..+..+++|++|+|++|.+++..+ ..+..+++|++|++++|.+...
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 6666666542 2556666666666666666664333 2556666666666666665543
No 353
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.72 E-value=2e-17 Score=181.36 Aligned_cols=147 Identities=25% Similarity=0.351 Sum_probs=121.1
Q ss_pred CCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCC-CCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEe
Q 008121 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIP-YQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (577)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 160 (577)
..+++.|+|++|.|++..| +..+++|+.|+|++|+|++ +| ..-.++|+.|+|++|+|++. ..+..+++|+.|+|
T Consensus 64 l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LSSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYL 138 (605)
T ss_dssp CTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CTTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEEC
T ss_pred CCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-ChhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEEC
Confidence 4688999999999987665 8899999999999999985 33 22238899999999999863 45888999999999
Q ss_pred ccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccccCCCCC-ccEEEeecCccccc
Q 008121 161 SRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP-LTTLNVANNHFSGW 238 (577)
Q Consensus 161 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~L~l~~N~l~g~ 238 (577)
++|+|++. ..+..+++|+.|+|++|+|++..| +..+++|+.|+|++|+|++. +.+..++ |+.|+|++|.|++.
T Consensus 139 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 139 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEEECC
T ss_pred CCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcCcCC
Confidence 99999876 568889999999999999987656 88899999999999999886 4455554 99999999999864
No 354
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.72 E-value=1.4e-17 Score=152.03 Aligned_cols=134 Identities=24% Similarity=0.222 Sum_probs=114.1
Q ss_pred CCCCCCEEEccCCCcC-CcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcE
Q 008121 105 DLLSLRKFDLSGNSIH-DTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLAT 181 (577)
Q Consensus 105 ~l~~L~~L~Ls~N~l~-~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 181 (577)
..++|+.|+|++|+|+ +.+|..+. ++|++|+|++|++++. ..+..+++|++|+|++|++++.+|..+.++++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 4578999999999998 78887754 8899999999999976 78899999999999999999888888888999999
Q ss_pred EeCcCCcccCCC-CCCccCCCCCCeEEccCcccccccc----cCCCCC-ccEEEeecCccccccCc
Q 008121 182 LDLSFNNFSGDL-PNSFISLSNISSLYLQNNQVTGSLN----VFSGLP-LTTLNVANNHFSGWIPR 241 (577)
Q Consensus 182 L~Ls~N~l~g~~-p~~~~~l~~L~~L~l~~N~l~~~~~----~~~~~~-L~~L~l~~N~l~g~~p~ 241 (577)
|+|++|+|++.. +..+..+++|++|++++|.+++.++ .+..++ |+.|++++|.+. .+|+
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 999999998532 2678899999999999999998776 566665 999999999887 4554
No 355
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=1.5e-17 Score=156.14 Aligned_cols=151 Identities=16% Similarity=0.239 Sum_probs=127.0
Q ss_pred cccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCC
Q 008121 102 LLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGL 179 (577)
Q Consensus 102 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 179 (577)
..+.+++|+.|+|++|+|+ .+| .+. ++|++|++++|.++. +..+..+++|++|+|++|++++..|..++.+++|
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 3477899999999999999 556 343 899999999997763 3478999999999999999999899999999999
Q ss_pred cEEeCcCCcccCCCCCCccCCCCCCeEEccCcc-cccccccCCCCC-ccEEEeecCccccccC-cccccccceeecCCcC
Q 008121 180 ATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQ-VTGSLNVFSGLP-LTTLNVANNHFSGWIP-RELISIRTFIYDGNSF 256 (577)
Q Consensus 180 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~~-L~~L~l~~N~l~g~~p-~~l~~l~~l~~~~n~~ 256 (577)
++|+|++|++++..|..+..+++|++|+|++|. ++.. +.+..++ |+.|++++|++++..+ ..+.+++.|++++|++
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~-~~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-MPLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCC-GGGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC--
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcccc-HhhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCccc
Confidence 999999999998888899999999999999998 5554 4555555 9999999999997432 3456788899999986
Q ss_pred C
Q 008121 257 D 257 (577)
Q Consensus 257 ~ 257 (577)
.
T Consensus 194 ~ 194 (197)
T 4ezg_A 194 G 194 (197)
T ss_dssp -
T ss_pred C
Confidence 4
No 356
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.71 E-value=1.5e-16 Score=169.30 Aligned_cols=163 Identities=21% Similarity=0.251 Sum_probs=78.6
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEecc
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (577)
.+++.|+|++|++++. | .++.+++|++|+|++|+|++ +|..-.++|++|+|++|+|++. | ++++++|++|+|++
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~ 115 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LDLSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDT 115 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CCCTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCS
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-EccccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCC
Confidence 3455555555555543 2 45555555555555555553 2322224555555555555542 2 44555555555555
Q ss_pred CCCcccccccccCCCCCcEEeCcCCcccC---------------------CCCCCccCCCCCCeEEccCcccccccccCC
Q 008121 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSG---------------------DLPNSFISLSNISSLYLQNNQVTGSLNVFS 221 (577)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g---------------------~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~ 221 (577)
|++++. | ++++++|++|+|++|+|++ .+ .+..+++|++|++++|+|++.+ +.
T Consensus 116 N~l~~l-~--~~~l~~L~~L~l~~N~l~~l~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l~--l~ 188 (457)
T 3bz5_A 116 NKLTKL-D--VSQNPLLTYLNCARNTLTEIDVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITELD--VS 188 (457)
T ss_dssp SCCSCC-C--CTTCTTCCEEECTTSCCSCCCCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCCC--CT
T ss_pred CcCCee-c--CCCCCcCCEEECCCCccceeccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccceec--cc
Confidence 555542 2 4455555555555555553 33 2444455555555555555432 22
Q ss_pred CCC-ccEEEeecCccccccCcccccccceeecCCcCCC
Q 008121 222 GLP-LTTLNVANNHFSGWIPRELISIRTFIYDGNSFDN 258 (577)
Q Consensus 222 ~~~-L~~L~l~~N~l~g~~p~~l~~l~~l~~~~n~~~~ 258 (577)
.++ |+.|++++|+|++.--..+.+++.|++++|.+..
T Consensus 189 ~l~~L~~L~l~~N~l~~~~l~~l~~L~~L~Ls~N~l~~ 226 (457)
T 3bz5_A 189 QNKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLTE 226 (457)
T ss_dssp TCTTCCEEECCSSCCSCCCCTTCTTCSEEECCSSCCSC
T ss_pred cCCCCCEEECcCCcCCeeccccCCCCCEEECcCCcccc
Confidence 222 5555555555554321233345555566665543
No 357
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.70 E-value=4.3e-17 Score=166.96 Aligned_cols=167 Identities=21% Similarity=0.325 Sum_probs=127.3
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEecc
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (577)
..++.|++++|.+.+..+ +..+++|+.|+|++|++.+..+....++|+.|++++|++++..+ +..+++|++|+|++
T Consensus 155 ~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~ 230 (347)
T 4fmz_A 155 TGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGN 230 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCS
T ss_pred CCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccccccccCCCccceeecccCCCCCCch--hhcCCcCCEEEccC
Confidence 578888999988886654 88888999999999988864443333788888888888886554 77888888888888
Q ss_pred CCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccccCCCCC-ccEEEeecCccccccCc
Q 008121 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP-LTTLNVANNHFSGWIPR 241 (577)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~L~l~~N~l~g~~p~ 241 (577)
|++++..+ +..+++|++|+|++|++++ + ..+..+++|++|++++|++++. +.+..++ |+.|++++|++++..|.
T Consensus 231 n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~ 305 (347)
T 4fmz_A 231 NKITDLSP--LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDME 305 (347)
T ss_dssp SCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHH
T ss_pred CccCCCcc--hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChh
Confidence 88886655 7788888888888888885 3 3577888888888888888875 3344443 88888888888877776
Q ss_pred cc---ccccceeecCCcCCC
Q 008121 242 EL---ISIRTFIYDGNSFDN 258 (577)
Q Consensus 242 ~l---~~l~~l~~~~n~~~~ 258 (577)
.+ .+++.|++++|++..
T Consensus 306 ~l~~l~~L~~L~L~~n~l~~ 325 (347)
T 4fmz_A 306 VIGGLTNLTTLFLSQNHITD 325 (347)
T ss_dssp HHHTCTTCSEEECCSSSCCC
T ss_pred HhhccccCCEEEccCCcccc
Confidence 54 356677788887654
No 358
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.70 E-value=1.5e-16 Score=169.22 Aligned_cols=162 Identities=20% Similarity=0.230 Sum_probs=125.6
Q ss_pred CCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEec
Q 008121 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (577)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (577)
..+++.|+|++|.+++. + ++.+++|++|+|++|+|++ +|..-.++|++|++++|+|++. + ++.+++|++|+++
T Consensus 84 l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~ 156 (457)
T 3bz5_A 84 NTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LDVSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCH 156 (457)
T ss_dssp CTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CCCTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECT
T ss_pred CCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ecCCCCCcCCEEECCCCcccee-c--cccCCcCCEEECC
Confidence 35789999999999985 3 8999999999999999996 5644448999999999999974 3 7888888888888
Q ss_pred cCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccccCCCCC-ccEEEeecCccccccC
Q 008121 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP-LTTLNVANNHFSGWIP 240 (577)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~L~l~~N~l~g~~p 240 (577)
+|+..+.+ .+..+++|++|+|++|+|++ +| +..+++|+.|++++|+|++. .+..++ |+.|++++|+|++ +|
T Consensus 157 ~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N~l~~-ip 228 (457)
T 3bz5_A 157 LNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSNKLTE-ID 228 (457)
T ss_dssp TCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSSCCSC-CC
T ss_pred CCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee--ccccCCCCCEEECcCCcccc-cC
Confidence 88766666 37788888888888888885 55 77788888888888888775 244443 7888888888886 45
Q ss_pred -cccccccceeecCCcCCC
Q 008121 241 -RELISIRTFIYDGNSFDN 258 (577)
Q Consensus 241 -~~l~~l~~l~~~~n~~~~ 258 (577)
..+.+++.|++++|.+..
T Consensus 229 ~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 229 VTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp CTTCTTCSEEECCSSCCSC
T ss_pred ccccCCCCEEEeeCCcCCC
Confidence 334466777777777654
No 359
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.70 E-value=7.1e-17 Score=176.95 Aligned_cols=168 Identities=22% Similarity=0.280 Sum_probs=142.4
Q ss_pred CCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEec
Q 008121 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (577)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (577)
...++.|+|++|.|... + .|..|++|+.|+|++|+|++..|..-.++|+.|+|++|+|++ +| .|..+++|+.|+|+
T Consensus 42 L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls 117 (605)
T 1m9s_A 42 LNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKPLTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLE 117 (605)
T ss_dssp HTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECT
T ss_pred CCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChhhccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEec
Confidence 35788899999999864 3 699999999999999999976663334899999999999996 34 79999999999999
Q ss_pred cCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccccCCCCC-ccEEEeecCccccccC
Q 008121 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP-LTTLNVANNHFSGWIP 240 (577)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~L~l~~N~l~g~~p 240 (577)
+|+|++. +.+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.|++.++ +..++ |+.|+|++|+|++. |
T Consensus 118 ~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i~~l-~ 191 (605)
T 1m9s_A 118 HNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISDL-R 191 (605)
T ss_dssp TSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCBC-G
T ss_pred CCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCCCCCC-h
Confidence 9999974 4588999999999999999964 678999999999999999999877 55555 99999999999974 4
Q ss_pred c--ccccccceeecCCcCCCC
Q 008121 241 R--ELISIRTFIYDGNSFDNG 259 (577)
Q Consensus 241 ~--~l~~l~~l~~~~n~~~~~ 259 (577)
. .+.+|..|++++|++...
T Consensus 192 ~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 192 ALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp GGTTCTTCSEEECCSEEEECC
T ss_pred HHccCCCCCEEEccCCcCcCC
Confidence 2 345678888999987654
No 360
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.70 E-value=8.5e-17 Score=158.25 Aligned_cols=147 Identities=20% Similarity=0.248 Sum_probs=119.7
Q ss_pred CCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEec
Q 008121 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (577)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (577)
..+++.|+|++|+++. ++ .+..+++|+.|+|++|+|++..|..-.++|++|+|++|++++ +|.. .. ++|++|+|+
T Consensus 40 l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~L~ 114 (263)
T 1xeu_A 40 LSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLFLD 114 (263)
T ss_dssp HTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGGGTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEECC
T ss_pred cCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChhhccCCCCCEEECCCCccCC-cCcc-cc-CcccEEEcc
Confidence 4678899999999885 44 788999999999999999976553333889999999999986 4433 33 899999999
Q ss_pred cCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccccCCCCC-ccEEEeecCccccc
Q 008121 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP-LTTLNVANNHFSGW 238 (577)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~L~l~~N~l~g~ 238 (577)
+|++++. + .+.++++|++|+|++|+|++ +| .+..+++|++|+|++|+|++. ..+..++ |+.|++++|.+++.
T Consensus 115 ~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 115 NNELRDT-D-SLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp SSCCSBS-G-GGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCccCCC-h-hhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccCC
Confidence 9999974 3 58899999999999999985 45 688899999999999999887 5555554 99999999999855
No 361
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.70 E-value=1e-17 Score=149.73 Aligned_cols=126 Identities=22% Similarity=0.232 Sum_probs=93.1
Q ss_pred CcEEEEEcCCCCCc-ccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEE
Q 008121 83 SAVVSIDISGLGLS-GTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (577)
Q Consensus 83 ~~v~~l~l~~~~l~-g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 159 (577)
.+++.|+|++|+++ +.+|..+..+++|+.|+|++|+|++. ..+. ++|++|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 46777888888887 77777778888888888888888755 2332 6788888888888777777777778888888
Q ss_pred eccCCCccc-ccccccCCCCCcEEeCcCCcccCCCC---CCccCCCCCCeEEccC
Q 008121 160 VSRNSLTQS-IGDIFGNLAGLATLDLSFNNFSGDLP---NSFISLSNISSLYLQN 210 (577)
Q Consensus 160 L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~g~~p---~~~~~l~~L~~L~l~~ 210 (577)
|++|++++. .+..+..+++|++|+|++|++++..+ ..+..+++|++|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 888888764 34677778888888888888875444 3577777777777653
No 362
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.69 E-value=1.5e-16 Score=169.97 Aligned_cols=167 Identities=26% Similarity=0.374 Sum_probs=128.9
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEecc
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (577)
..++.|+|++|.+++. +.+..+++|++|+|++|++++..|....++|++|++++|++++. ..+..+++|++|+|++
T Consensus 177 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~ 252 (466)
T 1o6v_A 177 TTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLAN 252 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCS
T ss_pred CCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCcccccccccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCC
Confidence 4678888888888764 34788888888888888888776655558888888888888854 3577888888888888
Q ss_pred CCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccccCCCCC-ccEEEeecCccccccC-
Q 008121 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP-LTTLNVANNHFSGWIP- 240 (577)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~L~l~~N~l~g~~p- 240 (577)
|++++..| +..+++|++|+|++|++++..| +..+++|++|+|++|++++.++ +..++ |+.|++++|++++..|
T Consensus 253 n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~~ 327 (466)
T 1o6v_A 253 NQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP-ISNLKNLTYLTLYFNNISDISPV 327 (466)
T ss_dssp SCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG-GGGCTTCSEEECCSSCCSCCGGG
T ss_pred Cccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh-hcCCCCCCEEECcCCcCCCchhh
Confidence 88887765 7888888888888888886443 7788888888888888887655 33333 8888888888887666
Q ss_pred cccccccceeecCCcCCC
Q 008121 241 RELISIRTFIYDGNSFDN 258 (577)
Q Consensus 241 ~~l~~l~~l~~~~n~~~~ 258 (577)
..+.+++.|++++|.+..
T Consensus 328 ~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 328 SSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp GGCTTCCEEECCSSCCCC
T ss_pred ccCccCCEeECCCCccCC
Confidence 345567778888887654
No 363
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.69 E-value=7.5e-17 Score=177.08 Aligned_cols=136 Identities=24% Similarity=0.396 Sum_probs=86.2
Q ss_pred CCCCCCCCCCCCCCCCccEE--------eeCCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCc
Q 008121 60 LTNWKGNEGDPCGESWKGVA--------CEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNL 131 (577)
Q Consensus 60 l~~w~~~~~~~c~~~w~gv~--------C~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L 131 (577)
+..|.. ..+|| .|+|.. |....++.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+|. ..++|
T Consensus 12 w~~W~~-~~~~~--~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~-~l~~L 83 (622)
T 3g06_A 12 WSAWRR-AAPAE--ESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA-LPPEL 83 (622)
T ss_dssp HHHHHH-TCCGG--GHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC-CCTTC
T ss_pred HHHHHh-cCCcc--hhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC-cCCCC
Confidence 345653 23455 676543 33346888888888887 6666555 68888888888887 4665 44788
Q ss_pred cEEEccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCc
Q 008121 132 TSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNN 211 (577)
Q Consensus 132 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 211 (577)
++|+|++|+|++ +|. .+++|++|+|++|+|++.. . .+++|+.|+|++|+|++ +|.. +++|++|+|++|
T Consensus 84 ~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~l~-~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N 151 (622)
T 3g06_A 84 RTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTHLP-A---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDN 151 (622)
T ss_dssp CEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCCCC-C---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSS
T ss_pred CEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCCCC-C---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCC
Confidence 888888888873 554 5677777777777777533 2 34555566666665553 4432 245555555555
Q ss_pred cccc
Q 008121 212 QVTG 215 (577)
Q Consensus 212 ~l~~ 215 (577)
+|++
T Consensus 152 ~l~~ 155 (622)
T 3g06_A 152 QLAS 155 (622)
T ss_dssp CCSC
T ss_pred cCCC
Confidence 5554
No 364
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.69 E-value=5.7e-17 Score=159.51 Aligned_cols=164 Identities=22% Similarity=0.313 Sum_probs=134.3
Q ss_pred cEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEEec
Q 008121 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (577)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (577)
.++.++|+++.+++.. .+..+++|+.|+|++|+|+ .+| .+. ++|++|+|++|+|++..| +..+++|++|+|+
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECC
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECC
Confidence 3556678888888654 6889999999999999998 455 333 899999999999997655 9999999999999
Q ss_pred cCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccccCCCCC-ccEEEeecCccccccC
Q 008121 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP-LTTLNVANNHFSGWIP 240 (577)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~L~l~~N~l~g~~p 240 (577)
+|++++. |. +.. ++|++|+|++|+|++ +| .+..+++|++|+|++|+|++.. .+..++ |+.|++++|+|++.-.
T Consensus 94 ~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~~-~l~~l~~L~~L~L~~N~i~~~~~ 167 (263)
T 1xeu_A 94 RNRLKNL-NG-IPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSIV-MLGFLSKLEVLDLHGNEITNTGG 167 (263)
T ss_dssp SSCCSCC-TT-CCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBCG-GGGGCTTCCEEECTTSCCCBCTT
T ss_pred CCccCCc-Cc-ccc-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCCh-HHccCCCCCEEECCCCcCcchHH
Confidence 9999974 43 233 999999999999996 44 5899999999999999999874 454444 9999999999997611
Q ss_pred -cccccccceeecCCcCCCC
Q 008121 241 -RELISIRTFIYDGNSFDNG 259 (577)
Q Consensus 241 -~~l~~l~~l~~~~n~~~~~ 259 (577)
..+.+++.|++++|++.+.
T Consensus 168 l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 168 LTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp STTCCCCCEEEEEEEEEECC
T ss_pred hccCCCCCEEeCCCCcccCC
Confidence 2345677889999987643
No 365
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.69 E-value=3.9e-16 Score=165.86 Aligned_cols=160 Identities=24% Similarity=0.351 Sum_probs=116.9
Q ss_pred CCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEec
Q 008121 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (577)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (577)
..+++.|+|++|.+++ +|.. +++|++|+|++|++++ +|. +.++|++|+|++|++++ +| .|+++++|++|+++
T Consensus 90 ~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~-~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~ 161 (454)
T 1jl5_A 90 PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSD-LPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVD 161 (454)
T ss_dssp CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCS-CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccC-CCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECC
Confidence 3578889999999987 5543 4788888999998885 443 33788999999999886 67 58888899999999
Q ss_pred cCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccccCCCCCccEEEeecCccccccCc
Q 008121 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPR 241 (577)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~~p~ 241 (577)
+|++++ +|..+ .+|++|+|++|++++ +| .++++++|++|++++|++++.+... ..|+.|++++|.++ .+|.
T Consensus 162 ~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~~~--~~L~~L~l~~n~l~-~lp~ 232 (454)
T 1jl5_A 162 NNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPDLP--LSLESIVAGNNILE-ELPE 232 (454)
T ss_dssp SSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCCCC--TTCCEEECCSSCCS-SCCC
T ss_pred CCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCCCc--CcccEEECcCCcCC-cccc
Confidence 998886 55443 588888888888885 66 5888888888888888887743322 24677777777776 5553
Q ss_pred --ccccccceeecCCcCCC
Q 008121 242 --ELISIRTFIYDGNSFDN 258 (577)
Q Consensus 242 --~l~~l~~l~~~~n~~~~ 258 (577)
.+.+++.|++++|.+..
T Consensus 233 ~~~l~~L~~L~l~~N~l~~ 251 (454)
T 1jl5_A 233 LQNLPFLTTIYADNNLLKT 251 (454)
T ss_dssp CTTCTTCCEEECCSSCCSS
T ss_pred cCCCCCCCEEECCCCcCCc
Confidence 22345566666666543
No 366
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.68 E-value=5.4e-17 Score=165.94 Aligned_cols=142 Identities=14% Similarity=0.134 Sum_probs=102.0
Q ss_pred cCCCccceeccCccceEEEEEEcCCcEEEEEEccccccc---------------hHH-----HHHHHHHHHHhhcCCCCc
Q 008121 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALS---------------LQE-----EDNFLEAVSNMSRLRHPN 469 (577)
Q Consensus 410 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---------------~~~-----~~~~~~e~~~l~~l~H~n 469 (577)
.-|.+.+.||+|+||.||+|...+|+.||||+++....+ ... .....+|...|.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 348889999999999999999999999999987532111 000 111234666666665544
Q ss_pred eeeEeeEEEeCCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC
Q 008121 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD 549 (577)
Q Consensus 470 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NILl~ 549 (577)
+....-+... ..+|||||++++.|.++.. . .....++.|++.+|.|||+. +||||||||.|||++
T Consensus 175 v~vp~p~~~~--~~~LVME~i~G~~L~~l~~--------~--~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~ 239 (397)
T 4gyi_A 175 FPVPEPIAQS--RHTIVMSLVDALPMRQVSS--------V--PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIR 239 (397)
T ss_dssp CSCCCEEEEE--TTEEEEECCSCEEGGGCCC--------C--SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE
T ss_pred CCCCeeeecc--CceEEEEecCCccHhhhcc--------c--HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEe
Confidence 4322222222 2379999999988876542 1 12356889999999999998 999999999999998
Q ss_pred CCCC----------eEEeccccCcccC
Q 008121 550 DELN----------PHLSDCGLAALTP 566 (577)
Q Consensus 550 ~~~~----------~kl~DFGla~~~~ 566 (577)
+++. +.|+||+-+....
T Consensus 240 ~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 240 EEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCCCcccccccccceEEEEeCCcccCC
Confidence 8763 8999999776543
No 367
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.68 E-value=2.1e-16 Score=161.87 Aligned_cols=166 Identities=23% Similarity=0.370 Sum_probs=121.2
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEecc
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (577)
..++.|++++|.....++ .+..+++|++|++++|.+.+..+..-.++|++|++++|++.+..+ +..+++|+.|++++
T Consensus 132 ~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~ 208 (347)
T 4fmz_A 132 TKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYV 208 (347)
T ss_dssp TTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred CceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchhhccCCCCCEEEccCCccccccc--ccCCCccceeeccc
Confidence 467888888886655544 378888888888888888765543333788888888888875443 77788888888888
Q ss_pred CCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccccCCCCC-ccEEEeecCccccccC-
Q 008121 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP-LTTLNVANNHFSGWIP- 240 (577)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~L~l~~N~l~g~~p- 240 (577)
|.+++..+ +..+++|++|+|++|++++ +|. +..+++|++|++++|.+++. +.+..++ |+.|++++|++++. |
T Consensus 209 n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~l~~n~l~~~-~~ 282 (347)
T 4fmz_A 209 NQITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISDI-NAVKDLTKLKMLNVGSNQISDI-SV 282 (347)
T ss_dssp SCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCCC-GG
T ss_pred CCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCCC-hhHhcCCCcCEEEccCCccCCC-hh
Confidence 88886655 7778888888888888885 343 77888888888888888775 3444444 88888888888754 3
Q ss_pred -cccccccceeecCCcCC
Q 008121 241 -RELISIRTFIYDGNSFD 257 (577)
Q Consensus 241 -~~l~~l~~l~~~~n~~~ 257 (577)
..+.+++.|++++|.+.
T Consensus 283 ~~~l~~L~~L~L~~n~l~ 300 (347)
T 4fmz_A 283 LNNLSQLNSLFLNNNQLG 300 (347)
T ss_dssp GGGCTTCSEEECCSSCCC
T ss_pred hcCCCCCCEEECcCCcCC
Confidence 23456777788888764
No 368
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.68 E-value=1.7e-18 Score=180.30 Aligned_cols=176 Identities=19% Similarity=0.249 Sum_probs=137.0
Q ss_pred CCcEEEEEcCCCCCcc----cccccccCCCCCCEEEccCCCcCCcCCCCCC---------------CCccEEEccCCcCC
Q 008121 82 GSAVVSIDISGLGLSG----TMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP---------------PNLTSLNLASNNFS 142 (577)
Q Consensus 82 ~~~v~~l~l~~~~l~g----~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---------------~~L~~L~l~~N~l~ 142 (577)
..+++.|+|++|.+++ .+|..+..+++|++|+|++|.|++..+..+. ++|++|+|++|+++
T Consensus 93 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~ 172 (386)
T 2ca6_A 93 CPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLE 172 (386)
T ss_dssp CTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCT
T ss_pred CCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCC
Confidence 4678889999999887 5777888899999999999988744332222 68999999999987
Q ss_pred -CcCC---CCccCCCCccEEEeccCCCc--c---cccccccCCCCCcEEeCcCCccc----CCCCCCccCCCCCCeEEcc
Q 008121 143 -GNLP---YSIASMVSLSYLNVSRNSLT--Q---SIGDIFGNLAGLATLDLSFNNFS----GDLPNSFISLSNISSLYLQ 209 (577)
Q Consensus 143 -~~~p---~~~~~l~~L~~L~L~~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----g~~p~~~~~l~~L~~L~l~ 209 (577)
+.+| ..+..+++|++|+|++|+|+ | .+|..+..+++|+.|+|++|+|+ +.+|..+..+++|++|+|+
T Consensus 173 ~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~ 252 (386)
T 2ca6_A 173 NGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLN 252 (386)
T ss_dssp GGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECT
T ss_pred cHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECC
Confidence 4455 46778889999999999988 3 45557888899999999999986 5678888888999999999
Q ss_pred Ccccccc----c-ccC--C-CCCccEEEeecCcccc----ccCccc----ccccceeecCCcCC
Q 008121 210 NNQVTGS----L-NVF--S-GLPLTTLNVANNHFSG----WIPREL----ISIRTFIYDGNSFD 257 (577)
Q Consensus 210 ~N~l~~~----~-~~~--~-~~~L~~L~l~~N~l~g----~~p~~l----~~l~~l~~~~n~~~ 257 (577)
+|.|++. + ..+ . ...|+.|+|++|.|++ .+|..+ .+++.|++++|++.
T Consensus 253 ~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~ 316 (386)
T 2ca6_A 253 DCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 316 (386)
T ss_dssp TCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred CCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCC
Confidence 9998864 2 233 2 2348999999999987 477654 56788888888764
No 369
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.67 E-value=2e-18 Score=188.07 Aligned_cols=151 Identities=19% Similarity=0.213 Sum_probs=114.6
Q ss_pred cEEEEEcCCCCCcccccccccCCCCCCEEEccCCC-------------cCCcCCCCCC----------------------
Q 008121 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNS-------------IHDTIPYQLP---------------------- 128 (577)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~-------------l~~~~p~~~~---------------------- 128 (577)
.++.|+|++|+|+ .+|..+++|++|+.|++++|. +.+.+|..+.
T Consensus 350 ~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L~~l 428 (567)
T 1dce_A 350 QLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSK 428 (567)
T ss_dssp TSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred cceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchhhhh
Confidence 4557788888886 778889999999999987764 3443332110
Q ss_pred ------------CCccEEEccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcccCCCCCC
Q 008121 129 ------------PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNS 196 (577)
Q Consensus 129 ------------~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 196 (577)
..|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .
T Consensus 429 ~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~ 503 (567)
T 1dce_A 429 FLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-G 503 (567)
T ss_dssp HHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-G
T ss_pred hhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-c
Confidence 257788888888886 565 888888888888888888 677788888888888888888885 66 7
Q ss_pred ccCCCCCCeEEccCcccccc--cccCCCCC-ccEEEeecCccccccC
Q 008121 197 FISLSNISSLYLQNNQVTGS--LNVFSGLP-LTTLNVANNHFSGWIP 240 (577)
Q Consensus 197 ~~~l~~L~~L~l~~N~l~~~--~~~~~~~~-L~~L~l~~N~l~g~~p 240 (577)
|+.+++|++|+|++|+|++. +..+..++ |+.|+|++|+|++..|
T Consensus 504 l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 504 VANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp GTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred cCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 88888888888888888887 45566655 8888888888886655
No 370
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=3.7e-17 Score=146.15 Aligned_cols=125 Identities=22% Similarity=0.215 Sum_probs=97.3
Q ss_pred CCCCCCEEEccCCCcC-CcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcE
Q 008121 105 DLLSLRKFDLSGNSIH-DTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLAT 181 (577)
Q Consensus 105 ~l~~L~~L~Ls~N~l~-~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 181 (577)
..++|+.|+|++|+++ +.+|..+. ++|++|+|++|++++. ..++.+++|++|+|++|++++.+|..+..+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3467888888888888 77776554 7888888888888866 67888888888888888888878888878888888
Q ss_pred EeCcCCcccCC-CCCCccCCCCCCeEEccCcccccccc----cCCCCC-ccEEEee
Q 008121 182 LDLSFNNFSGD-LPNSFISLSNISSLYLQNNQVTGSLN----VFSGLP-LTTLNVA 231 (577)
Q Consensus 182 L~Ls~N~l~g~-~p~~~~~l~~L~~L~l~~N~l~~~~~----~~~~~~-L~~L~l~ 231 (577)
|+|++|++++. .|..+..+++|++|++++|.+++.++ .+..++ |+.||++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 88888888853 34678888888888888888887654 344333 7777665
No 371
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.67 E-value=2.6e-16 Score=144.06 Aligned_cols=107 Identities=24% Similarity=0.356 Sum_probs=92.3
Q ss_pred CEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcc
Q 008121 110 RKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNF 189 (577)
Q Consensus 110 ~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 189 (577)
+.|++++|+|+ .+|..++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l 90 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL 90 (170)
T ss_dssp TEEECTTSCCS-SCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CEEEeCCCCcC-ccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCcc
Confidence 45666777776 47777778899999999999988899999999999999999999988888889999999999999999
Q ss_pred cCCCCCCccCCCCCCeEEccCccccccc
Q 008121 190 SGDLPNSFISLSNISSLYLQNNQVTGSL 217 (577)
Q Consensus 190 ~g~~p~~~~~l~~L~~L~l~~N~l~~~~ 217 (577)
++..+..|..+++|++|+|++|.++...
T Consensus 91 ~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 91 KSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 9766667899999999999999887653
No 372
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.65 E-value=5.8e-16 Score=142.27 Aligned_cols=107 Identities=23% Similarity=0.317 Sum_probs=92.1
Q ss_pred CEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcc
Q 008121 110 RKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNF 189 (577)
Q Consensus 110 ~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 189 (577)
+.+++++|+|+ .+|..++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l 93 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHL 93 (174)
T ss_dssp SEEECCSSCCS-SCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred cEEEeCCCCCC-ccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCcc
Confidence 46677777775 67777778899999999999988899999999999999999999988777789999999999999999
Q ss_pred cCCCCCCccCCCCCCeEEccCccccccc
Q 008121 190 SGDLPNSFISLSNISSLYLQNNQVTGSL 217 (577)
Q Consensus 190 ~g~~p~~~~~l~~L~~L~l~~N~l~~~~ 217 (577)
++..+..|..+++|++|+|++|.+....
T Consensus 94 ~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 94 KSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred ceeCHHHhccccCCCEEEeCCCCccccc
Confidence 9655556889999999999999887654
No 373
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.65 E-value=4.8e-18 Score=173.21 Aligned_cols=172 Identities=16% Similarity=0.226 Sum_probs=117.2
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCc-CCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEE
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDT-IPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 159 (577)
..++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+. ++|++|+|++|++++..|..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 5677777777777776554 55677888888888877754 553332 7788888888887777777777778888888
Q ss_pred eccC-CCcc-cccccccCCCCCcEEeCcCC-cccCC-CCCCccCCC-CCCeEEccCc--ccc-c-ccccCCCC-CccEEE
Q 008121 160 VSRN-SLTQ-SIGDIFGNLAGLATLDLSFN-NFSGD-LPNSFISLS-NISSLYLQNN--QVT-G-SLNVFSGL-PLTTLN 229 (577)
Q Consensus 160 L~~N-~l~~-~~p~~~~~l~~L~~L~Ls~N-~l~g~-~p~~~~~l~-~L~~L~l~~N--~l~-~-~~~~~~~~-~L~~L~ 229 (577)
|++| .+++ .++..+.++++|++|+|++| ++++. ++..+..++ +|++|+|++| .++ + .+..+..+ .|+.|+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~ 228 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 228 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEe
Confidence 8887 6765 36666777788888888888 77753 566667777 7888888887 344 2 22223233 378888
Q ss_pred eecCc-cccccCcccc---cccceeecCCc
Q 008121 230 VANNH-FSGWIPRELI---SIRTFIYDGNS 255 (577)
Q Consensus 230 l~~N~-l~g~~p~~l~---~l~~l~~~~n~ 255 (577)
+++|. +++..+..+. +++.|++++|.
T Consensus 229 l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 229 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp CTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred CCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 88887 6666555443 45566666664
No 374
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.64 E-value=2.3e-17 Score=185.19 Aligned_cols=145 Identities=23% Similarity=0.317 Sum_probs=120.2
Q ss_pred eCCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEE
Q 008121 81 EGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYL 158 (577)
Q Consensus 81 ~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 158 (577)
....++.|+|++|.+. .+|..++.+++|++|+|++|+|+ .+|..+. ++|++|+|++|+|+ .+|..|++|++|++|
T Consensus 222 ~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 298 (727)
T 4b8c_D 222 DDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYF 298 (727)
T ss_dssp CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEE
T ss_pred cCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEE
Confidence 3468999999999998 78888889999999999999999 8887775 89999999999999 789999999999999
Q ss_pred EeccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCC-CCeEEccCcccccccccCCCCCccEEEeecC
Q 008121 159 NVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSN-ISSLYLQNNQVTGSLNVFSGLPLTTLNVANN 233 (577)
Q Consensus 159 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~-L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N 233 (577)
+|++|.|+ .+|..|++|++|++|+|++|.|+|.+|..+..+.. +..|+|++|.+++.++. .|..|++++|
T Consensus 299 ~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~----~l~~l~l~~n 369 (727)
T 4b8c_D 299 YFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH----ERRFIEINTD 369 (727)
T ss_dssp ECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC----C---------
T ss_pred ECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc----ccceeEeecc
Confidence 99999998 77888999999999999999999999988765432 23578999999987653 2667777777
No 375
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.64 E-value=2.4e-15 Score=165.05 Aligned_cols=54 Identities=20% Similarity=0.368 Sum_probs=29.3
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEEccCCcCC
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFS 142 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~ 142 (577)
..++.|+|++|+|++ +|. .+++|++|+|++|+|++ +|. ..++|+.|+|++|+|+
T Consensus 81 ~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~-~l~~L~~L~L~~N~l~ 134 (622)
T 3g06_A 81 PELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA-LPSGLCKLWIFGNQLT 134 (622)
T ss_dssp TTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC-CCTTCCEEECCSSCCS
T ss_pred CCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC-CCCCcCEEECCCCCCC
Confidence 467777777777764 333 55666666666666653 333 2234444444444443
No 376
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.63 E-value=2.1e-16 Score=145.53 Aligned_cols=131 Identities=19% Similarity=0.243 Sum_probs=81.5
Q ss_pred cccCCCCCCEEEccCCCcCCcCCCCC--CCCccEEEccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCC
Q 008121 102 LLSDLLSLRKFDLSGNSIHDTIPYQL--PPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGL 179 (577)
Q Consensus 102 ~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 179 (577)
.+.++.+|+.|+|++|+|+. +|... .++|++|+|++|+|++. ..|+.+++|++|+|++|+|++..|..|..+++|
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hcCCcCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 45556666777777776663 33211 13677777777777654 456667777777777777775554555667777
Q ss_pred cEEeCcCCcccCCCCC--CccCCCCCCeEEccCccccccccc----CCCCC-ccEEEeecCccc
Q 008121 180 ATLDLSFNNFSGDLPN--SFISLSNISSLYLQNNQVTGSLNV----FSGLP-LTTLNVANNHFS 236 (577)
Q Consensus 180 ~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~l~~N~l~~~~~~----~~~~~-L~~L~l~~N~l~ 236 (577)
++|+|++|+|+ .+|. .+..+++|++|++++|.++..+.. +..++ |+.||+++|.+.
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 77777777775 4554 566667777777777776654432 33333 667777666654
No 377
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.62 E-value=2.5e-17 Score=171.43 Aligned_cols=86 Identities=24% Similarity=0.289 Sum_probs=39.8
Q ss_pred CCccEEEeccCCCc-cccc---ccccCCCCCcEEeCcCCccc--C---CCCCCccCCCCCCeEEccCcccc----ccc-c
Q 008121 153 VSLSYLNVSRNSLT-QSIG---DIFGNLAGLATLDLSFNNFS--G---DLPNSFISLSNISSLYLQNNQVT----GSL-N 218 (577)
Q Consensus 153 ~~L~~L~L~~N~l~-~~~p---~~~~~l~~L~~L~Ls~N~l~--g---~~p~~~~~l~~L~~L~l~~N~l~----~~~-~ 218 (577)
++|++|+|++|+|+ +.+| ..+..+++|++|+|++|+|+ | .+|..+..+++|++|+|++|.|+ +.+ .
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 45555555555554 2333 23444555555555555554 2 23334445555555555555553 111 1
Q ss_pred cCCCCC-ccEEEeecCccccc
Q 008121 219 VFSGLP-LTTLNVANNHFSGW 238 (577)
Q Consensus 219 ~~~~~~-L~~L~l~~N~l~g~ 238 (577)
.+..++ |+.|+|++|.|++.
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~ 259 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSAR 259 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHH
T ss_pred HHccCCCcCEEECCCCCCchh
Confidence 222222 55555555555543
No 378
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.61 E-value=5.2e-17 Score=167.57 Aligned_cols=154 Identities=24% Similarity=0.320 Sum_probs=75.5
Q ss_pred cEEEEEcCCCCCccccc----ccccCCC-CCCEEEccCCCcCCcCCCCC-------CCCccEEEccCCcCCCcCCCCccC
Q 008121 84 AVVSIDISGLGLSGTMG----YLLSDLL-SLRKFDLSGNSIHDTIPYQL-------PPNLTSLNLASNNFSGNLPYSIAS 151 (577)
Q Consensus 84 ~v~~l~l~~~~l~g~~~----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~-------~~~L~~L~l~~N~l~~~~p~~~~~ 151 (577)
.++.|+|++|.+++..+ ..|..++ +|++|+|++|+|++..+..+ .++|++|+|++|++++..+..+..
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 35555666655555444 4455555 55566666665554333211 145556666666555544443332
Q ss_pred C-----CCccEEEeccCCCccccccccc----C-CCCCcEEeCcCCcccCCCC----CCccCCC-CCCeEEccCcccccc
Q 008121 152 M-----VSLSYLNVSRNSLTQSIGDIFG----N-LAGLATLDLSFNNFSGDLP----NSFISLS-NISSLYLQNNQVTGS 216 (577)
Q Consensus 152 l-----~~L~~L~L~~N~l~~~~p~~~~----~-l~~L~~L~Ls~N~l~g~~p----~~~~~l~-~L~~L~l~~N~l~~~ 216 (577)
. ++|++|+|++|+|++..+..+. . .++|++|+|++|+|++..+ ..+..++ +|++|+|++|+|++.
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~ 182 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASK 182 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGS
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchh
Confidence 2 5556666666655554443322 2 2455566666665553222 2223333 555666666655543
Q ss_pred cc-----cCCC--CCccEEEeecCcccc
Q 008121 217 LN-----VFSG--LPLTTLNVANNHFSG 237 (577)
Q Consensus 217 ~~-----~~~~--~~L~~L~l~~N~l~g 237 (577)
.+ .+.. ..|+.|||++|.|++
T Consensus 183 ~~~~l~~~l~~~~~~L~~L~Ls~N~i~~ 210 (362)
T 3goz_A 183 NCAELAKFLASIPASVTSLDLSANLLGL 210 (362)
T ss_dssp CHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred hHHHHHHHHHhCCCCCCEEECCCCCCCh
Confidence 32 1111 135556666665554
No 379
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.61 E-value=2.4e-17 Score=167.97 Aligned_cols=180 Identities=16% Similarity=0.193 Sum_probs=151.8
Q ss_pred CCccEEeeCCcEEEEEcCCCCCcccccccccCC--CCCCEEEccCCCcCCcCCCCCC-CCccEEEccCCcCCCc-CCCCc
Q 008121 74 SWKGVACEGSAVVSIDISGLGLSGTMGYLLSDL--LSLRKFDLSGNSIHDTIPYQLP-PNLTSLNLASNNFSGN-LPYSI 149 (577)
Q Consensus 74 ~w~gv~C~~~~v~~l~l~~~~l~g~~~~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~-~~L~~L~l~~N~l~~~-~p~~~ 149 (577)
.|.++.|+...++.|+++++.+. +..+..+ ++|+.|++++|.+++..|..+. ++|++|+|++|++++. +|..+
T Consensus 38 ~W~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~ 114 (336)
T 2ast_B 38 RWYRLASDESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGIL 114 (336)
T ss_dssp HHHHHHTCSTTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHH
T ss_pred HHHHHhcCchhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHH
Confidence 68888887777889999999887 5667777 8999999999999987765443 8999999999999976 88889
Q ss_pred cCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCC-cccCC-CCCCccCCCCCCeEEccCc-ccccc--cccCCCC-
Q 008121 150 ASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFN-NFSGD-LPNSFISLSNISSLYLQNN-QVTGS--LNVFSGL- 223 (577)
Q Consensus 150 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~g~-~p~~~~~l~~L~~L~l~~N-~l~~~--~~~~~~~- 223 (577)
..+++|++|+|++|++++..|..++.+++|++|+|++| .+++. +|..+.++++|++|++++| .+++. ...+..+
T Consensus 115 ~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~ 194 (336)
T 2ast_B 115 SQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVS 194 (336)
T ss_dssp TTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSC
T ss_pred hhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999 78863 6777889999999999999 99863 2323333
Q ss_pred -CccEEEeecC--ccc-cccCcc---cccccceeecCCcC
Q 008121 224 -PLTTLNVANN--HFS-GWIPRE---LISIRTFIYDGNSF 256 (577)
Q Consensus 224 -~L~~L~l~~N--~l~-g~~p~~---l~~l~~l~~~~n~~ 256 (577)
.|+.|++++| .++ +.+|.. +.+++.|++++|..
T Consensus 195 ~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~ 234 (336)
T 2ast_B 195 ETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVM 234 (336)
T ss_dssp TTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTT
T ss_pred cCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCc
Confidence 5999999999 566 455643 45788899999873
No 380
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.60 E-value=3.2e-17 Score=169.17 Aligned_cols=174 Identities=24% Similarity=0.293 Sum_probs=131.4
Q ss_pred cEEEEEcCCCCCcccccccccCC-----CCCCEEEccCCCcCCcCCCCC-------CCCccEEEccCCcCCCcCCCCccC
Q 008121 84 AVVSIDISGLGLSGTMGYLLSDL-----LSLRKFDLSGNSIHDTIPYQL-------PPNLTSLNLASNNFSGNLPYSIAS 151 (577)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~-------~~~L~~L~l~~N~l~~~~p~~~~~ 151 (577)
+++.|+|++|.+++..+..++.+ ++|++|+|++|+|++..+..+ .++|++|+|++|+|++..+..+..
T Consensus 52 ~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 131 (362)
T 3goz_A 52 SVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQ 131 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred ceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHH
Confidence 78999999999998877777775 899999999999986555322 268999999999998776655443
Q ss_pred -----CCCccEEEeccCCCccc----ccccccCCC-CCcEEeCcCCcccCCCCCCcc----CC-CCCCeEEccCccccc-
Q 008121 152 -----MVSLSYLNVSRNSLTQS----IGDIFGNLA-GLATLDLSFNNFSGDLPNSFI----SL-SNISSLYLQNNQVTG- 215 (577)
Q Consensus 152 -----l~~L~~L~L~~N~l~~~----~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~----~l-~~L~~L~l~~N~l~~- 215 (577)
.++|++|+|++|+|++. ++..+..++ +|++|+|++|+|++..+..+. .+ ++|++|+|++|.|++
T Consensus 132 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~ 211 (362)
T 3goz_A 132 AFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLK 211 (362)
T ss_dssp HHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGS
T ss_pred HHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChh
Confidence 25899999999999853 444556665 899999999999876665444 34 589999999999887
Q ss_pred ----ccccCCC--CCccEEEeecCccccccC-------cccccccceeecCCcCC
Q 008121 216 ----SLNVFSG--LPLTTLNVANNHFSGWIP-------RELISIRTFIYDGNSFD 257 (577)
Q Consensus 216 ----~~~~~~~--~~L~~L~l~~N~l~g~~p-------~~l~~l~~l~~~~n~~~ 257 (577)
....+.. ..|+.|+|++|.|++..+ ..+.+++.|++++|.+.
T Consensus 212 ~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~ 266 (362)
T 3goz_A 212 SYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVK 266 (362)
T ss_dssp CHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHT
T ss_pred HHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCcc
Confidence 2233322 259999999999987544 33456788888888743
No 381
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.59 E-value=4.7e-18 Score=159.84 Aligned_cols=130 Identities=25% Similarity=0.288 Sum_probs=90.5
Q ss_pred CcEEEEEcCCCCCcccccc------cccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCC
Q 008121 83 SAVVSIDISGLGLSGTMGY------LLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVS 154 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~ 154 (577)
..++.++|+.+.++|.+|. .++.+++|++|+|++|+|++ +| .+. ++|++|+|++|+++ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 3455566666666666665 77778888888888888875 55 443 77777888777777 56666666777
Q ss_pred ccEEEeccCCCcccccccccCCCCCcEEeCcCCcccCCCC-CCccCCCCCCeEEccCccccccc
Q 008121 155 LSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLP-NSFISLSNISSLYLQNNQVTGSL 217 (577)
Q Consensus 155 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~~ 217 (577)
|++|+|++|++++ +| .+.++++|++|+|++|++++..+ ..+..+++|++|++++|.+++.+
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~ 156 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDY 156 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccc
Confidence 7777777777776 34 46777777777777777774221 35667777777777777776654
No 382
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.59 E-value=1.5e-15 Score=139.79 Aligned_cols=129 Identities=19% Similarity=0.232 Sum_probs=110.0
Q ss_pred CCcEEEEEcCCCCCcccccccccCCC-CCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEE
Q 008121 82 GSAVVSIDISGLGLSGTMGYLLSDLL-SLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYL 158 (577)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 158 (577)
...++.|+|++|+++.. | .+..+. +|+.|+|++|+|++. ..+. ++|++|+|++|+|++..|..|..+++|++|
T Consensus 18 ~~~L~~L~l~~n~l~~i-~-~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 18 AVRDRELDLRGYKIPVI-E-NLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TTSCEEEECTTSCCCSC-C-CGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred cCCceEEEeeCCCCchh-H-HhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 35789999999999954 4 455555 999999999999975 3343 899999999999997665666999999999
Q ss_pred EeccCCCcccccc--cccCCCCCcEEeCcCCcccCCCCCC----ccCCCCCCeEEccCcccccc
Q 008121 159 NVSRNSLTQSIGD--IFGNLAGLATLDLSFNNFSGDLPNS----FISLSNISSLYLQNNQVTGS 216 (577)
Q Consensus 159 ~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~g~~p~~----~~~l~~L~~L~l~~N~l~~~ 216 (577)
+|++|+|+. +|. .+..+++|+.|+|++|.++ .+|.. +..+++|+.|++++|.+...
T Consensus 94 ~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~~ 155 (176)
T 1a9n_A 94 ILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKER 155 (176)
T ss_dssp ECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHHH
T ss_pred ECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHHH
Confidence 999999964 555 7899999999999999998 57775 88999999999999988653
No 383
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.59 E-value=3e-15 Score=136.99 Aligned_cols=103 Identities=22% Similarity=0.246 Sum_probs=91.0
Q ss_pred EEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEEeccCC
Q 008121 87 SIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNS 164 (577)
Q Consensus 87 ~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 164 (577)
.|++++|+|+. +|..+. ++|+.|+|++|+|++..|..+. ++|++|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 13 ~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 45667788875 565553 8999999999999987787665 899999999999998888889999999999999999
Q ss_pred CcccccccccCCCCCcEEeCcCCcccCC
Q 008121 165 LTQSIGDIFGNLAGLATLDLSFNNFSGD 192 (577)
Q Consensus 165 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 192 (577)
|++..+..|.++++|++|+|++|.++..
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 9998888899999999999999999854
No 384
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.56 E-value=7.9e-15 Score=159.71 Aligned_cols=118 Identities=24% Similarity=0.321 Sum_probs=103.7
Q ss_pred CCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCc
Q 008121 108 SLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLS 185 (577)
Q Consensus 108 ~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 185 (577)
.|+.|+|++|+|++ +|. +. ++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .|+++++|++|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 47789999999996 675 54 89999999999999 889999999999999999999998 66 89999999999999
Q ss_pred CCcccCCC-CCCccCCCCCCeEEccCcccccccccCCC----CC-ccEEEe
Q 008121 186 FNNFSGDL-PNSFISLSNISSLYLQNNQVTGSLNVFSG----LP-LTTLNV 230 (577)
Q Consensus 186 ~N~l~g~~-p~~~~~l~~L~~L~l~~N~l~~~~~~~~~----~~-L~~L~l 230 (577)
+|+|++.. |..|+.+++|+.|+|++|+|++.++.... ++ |+.|++
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 99999876 99999999999999999999998764432 23 777653
No 385
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.53 E-value=4.1e-14 Score=129.87 Aligned_cols=108 Identities=19% Similarity=0.209 Sum_probs=94.2
Q ss_pred EEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEEeccC
Q 008121 86 VSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRN 163 (577)
Q Consensus 86 ~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N 163 (577)
+.+++++|+|+ .+|..+. ++|+.|+|++|+|++..|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 57888999996 6676664 8999999999999987787665 89999999999999877777899999999999999
Q ss_pred CCcccccccccCCCCCcEEeCcCCcccCCCCCCc
Q 008121 164 SLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSF 197 (577)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 197 (577)
+|++..+..|.++++|++|+|++|.+.. .+..+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c-~~~~~ 124 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC-ECRDI 124 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT-TBGGG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc-ccccH
Confidence 9998888789999999999999999984 44433
No 386
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.53 E-value=2.2e-14 Score=147.14 Aligned_cols=173 Identities=17% Similarity=0.171 Sum_probs=139.5
Q ss_pred CCcEEEEEcCCCCCcccccc-cccCCCCCCE-EEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccE
Q 008121 82 GSAVVSIDISGLGLSGTMGY-LLSDLLSLRK-FDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSY 157 (577)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~-~~~~l~~L~~-L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 157 (577)
..+++.|+|++|.+.+.+|. .|.+|++|+. +++++|+|+...|..+. ++|++|++++|++++..+..+....++..
T Consensus 53 l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~ 132 (350)
T 4ay9_X 53 FGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVL 132 (350)
T ss_dssp CTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEE
T ss_pred CCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhh
Confidence 36899999999999887764 6889998775 77788999966666554 89999999999999888888888889999
Q ss_pred EEecc-CCCcccccccccCCC-CCcEEeCcCCcccCCCCCCccCCCCCCeEEccC-cccccccc-cCCCCC-ccEEEeec
Q 008121 158 LNVSR-NSLTQSIGDIFGNLA-GLATLDLSFNNFSGDLPNSFISLSNISSLYLQN-NQVTGSLN-VFSGLP-LTTLNVAN 232 (577)
Q Consensus 158 L~L~~-N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~-N~l~~~~~-~~~~~~-L~~L~l~~ 232 (577)
|++++ |++....+..|..+. .|+.|+|++|+|+ .+|.......+|++|++.+ |.++..++ .|..++ |+.|||++
T Consensus 133 l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~ 211 (350)
T 4ay9_X 133 LDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISR 211 (350)
T ss_dssp EEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTT
T ss_pred hhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCC
Confidence 99976 677777677787775 6899999999999 5666666677899999985 66766654 466665 99999999
Q ss_pred CccccccCcccccccceeecCCc
Q 008121 233 NHFSGWIPRELISIRTFIYDGNS 255 (577)
Q Consensus 233 N~l~g~~p~~l~~l~~l~~~~n~ 255 (577)
|+|+...+..+.+++.|...++.
T Consensus 212 N~l~~lp~~~~~~L~~L~~l~~~ 234 (350)
T 4ay9_X 212 TRIHSLPSYGLENLKKLRARSTY 234 (350)
T ss_dssp SCCCCCCSSSCTTCCEEECTTCT
T ss_pred CCcCccChhhhccchHhhhccCC
Confidence 99995444568888888876653
No 387
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.53 E-value=3.8e-17 Score=153.56 Aligned_cols=134 Identities=25% Similarity=0.334 Sum_probs=117.0
Q ss_pred ccCCCCCCEEEccCCCcCCcCCC------CCC--CCccEEEccCCcCCCcCCCCccCCCCccEEEeccCCCccccccccc
Q 008121 103 LSDLLSLRKFDLSGNSIHDTIPY------QLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFG 174 (577)
Q Consensus 103 ~~~l~~L~~L~Ls~N~l~~~~p~------~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 174 (577)
+.....++.++|+.|.++|.+|. .+. ++|++|+|++|++++ +| .+..+++|++|+|++|+|+ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 56678899999999999998885 343 899999999999997 67 8999999999999999999 6788888
Q ss_pred CCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccc--cCCCCC-ccEEEeecCccccccCc
Q 008121 175 NLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN--VFSGLP-LTTLNVANNHFSGWIPR 241 (577)
Q Consensus 175 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~~~~-L~~L~l~~N~l~g~~p~ 241 (577)
.+++|++|+|++|+|++ +| .+..+++|++|+|++|+|++... .+..++ |+.|++++|.+++.+|.
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 88999999999999996 66 68899999999999999997543 555555 99999999999988765
No 388
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.49 E-value=1e-15 Score=162.82 Aligned_cols=174 Identities=20% Similarity=0.209 Sum_probs=139.0
Q ss_pred cEEEEEcCCCCCcc----cccccccCCCCCCEEEccCCCcCCcCCCCC-------CCCccEEEccCCcCCCc----CCCC
Q 008121 84 AVVSIDISGLGLSG----TMGYLLSDLLSLRKFDLSGNSIHDTIPYQL-------PPNLTSLNLASNNFSGN----LPYS 148 (577)
Q Consensus 84 ~v~~l~l~~~~l~g----~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~-------~~~L~~L~l~~N~l~~~----~p~~ 148 (577)
+++.|+|++|+++. .++..+..+++|++|+|++|.+++..+..+ .++|++|+|++|++++. ++..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 69999999999984 678899999999999999999985433221 25799999999999974 3666
Q ss_pred ccCCCCccEEEeccCCCccccccccc-----CCCCCcEEeCcCCcccCC----CCCCccCCCCCCeEEccCccccccc--
Q 008121 149 IASMVSLSYLNVSRNSLTQSIGDIFG-----NLAGLATLDLSFNNFSGD----LPNSFISLSNISSLYLQNNQVTGSL-- 217 (577)
Q Consensus 149 ~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~~-- 217 (577)
+..+++|++|+|++|.+++..+..+. .+++|++|+|++|++++. ++..+..+++|++|+|++|.+++..
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~ 245 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMA 245 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHH
Confidence 77789999999999999876555543 367999999999999864 5777888999999999999988631
Q ss_pred ---cc-CCC-CCccEEEeecCccccc----cCcc---cccccceeecCCcCC
Q 008121 218 ---NV-FSG-LPLTTLNVANNHFSGW----IPRE---LISIRTFIYDGNSFD 257 (577)
Q Consensus 218 ---~~-~~~-~~L~~L~l~~N~l~g~----~p~~---l~~l~~l~~~~n~~~ 257 (577)
+. +.. ..|+.|++++|.+++. ++.. +.+++.|++++|.+.
T Consensus 246 ~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~ 297 (461)
T 1z7x_W 246 ELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELG 297 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCH
T ss_pred HHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCc
Confidence 22 222 3499999999999864 5654 456788999998764
No 389
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.48 E-value=1.4e-15 Score=161.74 Aligned_cols=174 Identities=18% Similarity=0.215 Sum_probs=104.8
Q ss_pred cEEEEEcCCCCCccc----ccccccCCCCCCEEEccCCCcCCcC-----CCC--CCCCccEEEccCCcCCCc----CCCC
Q 008121 84 AVVSIDISGLGLSGT----MGYLLSDLLSLRKFDLSGNSIHDTI-----PYQ--LPPNLTSLNLASNNFSGN----LPYS 148 (577)
Q Consensus 84 ~v~~l~l~~~~l~g~----~~~~~~~l~~L~~L~Ls~N~l~~~~-----p~~--~~~~L~~L~l~~N~l~~~----~p~~ 148 (577)
+++.|+|++|.+++. ++..+..+++|++|+|++|++++.. +.. -.++|++|+|++|++++. ++..
T Consensus 200 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 279 (461)
T 1z7x_W 200 QLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRV 279 (461)
T ss_dssp CCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHH
T ss_pred CceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHH
Confidence 556666666666553 4555566666666777666665321 110 125677777777777643 4555
Q ss_pred ccCCCCccEEEeccCCCcccccccccC-----CCCCcEEeCcCCcccCC----CCCCccCCCCCCeEEccCccccccc-c
Q 008121 149 IASMVSLSYLNVSRNSLTQSIGDIFGN-----LAGLATLDLSFNNFSGD----LPNSFISLSNISSLYLQNNQVTGSL-N 218 (577)
Q Consensus 149 ~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~~-~ 218 (577)
+..+++|++|+|++|.+++..+..+.. .++|++|+|++|.+++. +|..+..+++|++|+|++|.+++.. .
T Consensus 280 l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 359 (461)
T 1z7x_W 280 LRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVR 359 (461)
T ss_dssp HHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHH
T ss_pred HhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHH
Confidence 666677777777777776544333322 25777777777777654 3455566677777777777776532 1
Q ss_pred ----cCC--CCCccEEEeecCcccc----ccCccc---ccccceeecCCcCC
Q 008121 219 ----VFS--GLPLTTLNVANNHFSG----WIPREL---ISIRTFIYDGNSFD 257 (577)
Q Consensus 219 ----~~~--~~~L~~L~l~~N~l~g----~~p~~l---~~l~~l~~~~n~~~ 257 (577)
.+. ...|+.|++++|.+++ .+|..+ .+++.|++++|++.
T Consensus 360 ~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 360 ELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred HHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 111 2247777777777775 566543 45666777777653
No 390
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.46 E-value=8.5e-14 Score=142.45 Aligned_cols=111 Identities=20% Similarity=0.268 Sum_probs=71.3
Q ss_pred CC-CCCCccEEeeCCcEEEEEcCCC-CCcccccccccCCCCCCEEEccC-CCcCCcCCCCCCCCccEEEccCCcCCCcCC
Q 008121 70 PC-GESWKGVACEGSAVVSIDISGL-GLSGTMGYLLSDLLSLRKFDLSG-NSIHDTIPYQLPPNLTSLNLASNNFSGNLP 146 (577)
Q Consensus 70 ~c-~~~w~gv~C~~~~v~~l~l~~~-~l~g~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p 146 (577)
.| .|.|..|.|+ ++ +|++ +|. |..+++|+.|+|++ |+|++ ..|
T Consensus 4 ~c~~C~~~~v~~~----------~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~----------------------~~~ 49 (347)
T 2ifg_A 4 ACCPHGSSGLRCT----------RDGALDS-LHH-LPGAENLTELYIENQQHLQH----------------------LEL 49 (347)
T ss_dssp SSCCSSSSCEECC----------SSCCCTT-TTT-SCSCSCCSEEECCSCSSCCE----------------------ECG
T ss_pred cCccccCCEEEcC----------CCCCCCc-cCC-CCCCCCeeEEEccCCCCCCC----------------------cCh
Confidence 45 5578877775 33 5654 555 77777666666664 66653 444
Q ss_pred CCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCccccc
Q 008121 147 YSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTG 215 (577)
Q Consensus 147 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 215 (577)
..|++|++|++|+|++|+|++.+|..|.+|++|+.|+|++|+|++..|..|..++ |+.|+|++|.|..
T Consensus 50 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 50 RDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp GGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred hHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 5566667777777777777776666677777777777777777754444444443 7777777777664
No 391
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.43 E-value=2.4e-13 Score=139.01 Aligned_cols=104 Identities=18% Similarity=0.177 Sum_probs=93.2
Q ss_pred EEEccCC-cCCCcCCCCccCCCCccEEEecc-CCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccC
Q 008121 133 SLNLASN-NFSGNLPYSIASMVSLSYLNVSR-NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQN 210 (577)
Q Consensus 133 ~L~l~~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 210 (577)
.+++++| +|+ .+|. |..+++|+.|+|++ |+|++..|..|.+|++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4677777 777 4777 99999999999996 999999999999999999999999999999999999999999999999
Q ss_pred ccccccccc-CCCCCccEEEeecCccccc
Q 008121 211 NQVTGSLNV-FSGLPLTTLNVANNHFSGW 238 (577)
Q Consensus 211 N~l~~~~~~-~~~~~L~~L~l~~N~l~g~ 238 (577)
|+|++.++. +..++|+.|+|++|.|...
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLHCS 118 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCCCC
T ss_pred CccceeCHHHcccCCceEEEeeCCCccCC
Confidence 999997764 5666799999999999853
No 392
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.32 E-value=4.3e-12 Score=124.31 Aligned_cols=144 Identities=12% Similarity=0.051 Sum_probs=111.3
Q ss_pred hcCCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCC-CCceeeEeeEEEeCCeEEEEE
Q 008121 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLLVY 487 (577)
Q Consensus 409 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ 487 (577)
-..|.....++.|+.+.||++... ++.+++|+...... .....+.+|+++++.+. |..+.++++++...+..|+||
T Consensus 13 l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~--~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 13 IEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK--GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp HTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT--TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred hccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC--CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 345777778888889999999754 67899999864211 12235788999888884 677889999999888999999
Q ss_pred EecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----------------------------------
Q 008121 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC----------------------------------- 532 (577)
Q Consensus 488 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~----------------------------------- 532 (577)
||++|.+|.+.+. +......++.+++++|+.||+..
T Consensus 90 e~i~G~~l~~~~~---------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (263)
T 3tm0_A 90 SEADGVLCSEEYE---------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE 160 (263)
T ss_dssp ECCSSEEHHHHCC---------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred EecCCeehhhccC---------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence 9999999887641 11123478889999999999821
Q ss_pred ---------------------CCCeeecCCCCCCeeeCCCCCeEEeccccCcc
Q 008121 533 ---------------------LPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (577)
Q Consensus 533 ---------------------~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~ 564 (577)
.+.++|+|+++.|||++++..+.|+||+.+..
T Consensus 161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 13589999999999998766677999998864
No 393
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.31 E-value=3.4e-14 Score=146.59 Aligned_cols=162 Identities=14% Similarity=0.157 Sum_probs=119.1
Q ss_pred CcEEEEEcCCCCCcccccccccCC-----CCCCEEEccCCCcCCcCCCCCC---CCccEEEccCCcCCCcCCCCc-----
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDL-----LSLRKFDLSGNSIHDTIPYQLP---PNLTSLNLASNNFSGNLPYSI----- 149 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~---~~L~~L~l~~N~l~~~~p~~~----- 149 (577)
..++.|+|++|.|+......+..+ ++|+.|||++|.|+..-...+. ++|+.|+|++|+|+..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 578999999999987554444433 7999999999999753332332 689999999999985444444
Q ss_pred cCCCCccEEEeccCCCcc----cccccccCCCCCcEEeCcCCcccCC----CCCCccCCCCCCeEEccCccccccc----
Q 008121 150 ASMVSLSYLNVSRNSLTQ----SIGDIFGNLAGLATLDLSFNNFSGD----LPNSFISLSNISSLYLQNNQVTGSL---- 217 (577)
Q Consensus 150 ~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~~---- 217 (577)
...++|++|+|++|.|+. .++..+..+++|++|+|++|+|+.. ++..+...++|++|+|++|.|+...
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 245789999999999975 3455567889999999999999742 2455667789999999999998632
Q ss_pred -ccCC-CCCccEEEeecCccccccCcccc
Q 008121 218 -NVFS-GLPLTTLNVANNHFSGWIPRELI 244 (577)
Q Consensus 218 -~~~~-~~~L~~L~l~~N~l~g~~p~~l~ 244 (577)
..+. ...|+.|||++|.|+..-...+.
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSSEGRQVLR 260 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCHHHHHHHH
T ss_pred HHHHHhCCCCCEEeccCCCCCHHHHHHHH
Confidence 1121 23499999999999865444443
No 394
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.22 E-value=3.4e-11 Score=122.17 Aligned_cols=93 Identities=18% Similarity=0.144 Sum_probs=54.6
Q ss_pred CCCccEEEeccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCC-eEEccCccccccc-ccCCCCC-ccEE
Q 008121 152 MVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNIS-SLYLQNNQVTGSL-NVFSGLP-LTTL 228 (577)
Q Consensus 152 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~-~L~l~~N~l~~~~-~~~~~~~-L~~L 228 (577)
+++|+.|+|++|+++.+.+..|.++++|+.|+|.+| ++..-+..|.+|.+|+ .+++.+ +++... .+|...+ |+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 456666666666666555556666666666666666 5544445566666666 666666 444433 2455443 6666
Q ss_pred EeecCccccccCcccccc
Q 008121 229 NVANNHFSGWIPRELISI 246 (577)
Q Consensus 229 ~l~~N~l~g~~p~~l~~l 246 (577)
++++|+++..-+..|.++
T Consensus 303 ~l~~n~i~~I~~~aF~~~ 320 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNG 320 (329)
T ss_dssp EECSSCCCEECTTTTCTT
T ss_pred EeCCCccCccchhhhcCC
Confidence 666666664333444433
No 395
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.22 E-value=8.9e-12 Score=121.58 Aligned_cols=130 Identities=18% Similarity=0.179 Sum_probs=97.8
Q ss_pred ccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCc--eeeEeeEEEeCCeEEEEEEecCCCCHH
Q 008121 419 GEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN--IVTLAGYCAEHGQRLLVYEYVGNGNLH 496 (577)
Q Consensus 419 g~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~~~~~~~~~~~lv~e~~~~g~L~ 496 (577)
+.|..+.||++...+|+.+++|..... ....+.+|+++++.+.+.+ +.+++++....+..++||||++|.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~-----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~ 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG-----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC-----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc-----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence 456669999998777888999987543 1234678888888886545 456888888878899999999998773
Q ss_pred HhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--------------------------------------------
Q 008121 497 DMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC-------------------------------------------- 532 (577)
Q Consensus 497 ~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~-------------------------------------------- 532 (577)
.. . .+ ...++.++++.|..||+..
T Consensus 104 --~~----~---~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
T 1nd4_A 104 --SS----H---LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELF 171 (264)
T ss_dssp --TS----C---CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHH
T ss_pred --cC----c---CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHH
Confidence 21 0 11 2357778888888888752
Q ss_pred -----------CCCeeecCCCCCCeeeCCCCCeEEeccccCccc
Q 008121 533 -----------LPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (577)
Q Consensus 533 -----------~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~ 565 (577)
.+.++|+|++|.||+++++..++|+|||.+...
T Consensus 172 ~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 172 ARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp HHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 012999999999999988766789999998754
No 396
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.13 E-value=1.5e-12 Score=134.25 Aligned_cols=134 Identities=19% Similarity=0.222 Sum_probs=105.5
Q ss_pred CcEEEEEcCCCCCcccccccc-cCCCCCCEEEccCCCcCCcCCCCC-------CCCccEEEccCCcCCC----cCCCCcc
Q 008121 83 SAVVSIDISGLGLSGTMGYLL-SDLLSLRKFDLSGNSIHDTIPYQL-------PPNLTSLNLASNNFSG----NLPYSIA 150 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~-~~l~~L~~L~Ls~N~l~~~~p~~~-------~~~L~~L~l~~N~l~~----~~p~~~~ 150 (577)
..++.|+|++|.|+..-...+ ..+++|+.|+|++|+|+......+ .++|++|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 589999999999976544443 356789999999999984322221 2789999999999974 3455567
Q ss_pred CCCCccEEEeccCCCccc----ccccccCCCCCcEEeCcCCcccCC----CCCCccCCCCCCeEEccCcccccc
Q 008121 151 SMVSLSYLNVSRNSLTQS----IGDIFGNLAGLATLDLSFNNFSGD----LPNSFISLSNISSLYLQNNQVTGS 216 (577)
Q Consensus 151 ~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~ 216 (577)
.+++|++|+|++|+|++. ++..+...++|++|+|++|.|+.. ++..+...++|++|+|++|.|+..
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 789999999999999853 466778889999999999999853 334455678999999999999863
No 397
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.12 E-value=1.7e-10 Score=118.38 Aligned_cols=143 Identities=16% Similarity=0.256 Sum_probs=106.1
Q ss_pred ccceeccCccceEEEEEEcCCcEEEEEEcc--ccccchHHHHHHHHHHHHhhcCC--CCceeeEeeEEEeC---CeEEEE
Q 008121 414 QEFLIGEGSLGRVYRAEFANGKIMAVKKID--NAALSLQEEDNFLEAVSNMSRLR--HPNIVTLAGYCAEH---GQRLLV 486 (577)
Q Consensus 414 ~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~---~~~~lv 486 (577)
..+.++.|.++.||+....+ ..+++|+.. .... ......+.+|.++++.+. +..+.++++++.+. +..|+|
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~-~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKL-LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCC-CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 35678999999999998764 577788765 3211 122446788999998887 45578889888766 458999
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC----------------------------------
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC---------------------------------- 532 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~---------------------------------- 532 (577)
|||++|..+.+.. ...++..++..++.++++.|+.||+..
T Consensus 120 me~v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (359)
T 3dxp_A 120 MEFVSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETES 193 (359)
T ss_dssp EECCCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSC
T ss_pred EEecCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcC
Confidence 9999987764321 234678888999999999999999731
Q ss_pred ---------------------CCCeeecCCCCCCeeeCCCCC--eEEeccccCcc
Q 008121 533 ---------------------LPSVVHRNFKSANILLDDELN--PHLSDCGLAAL 564 (577)
Q Consensus 533 ---------------------~~~ivHrDlk~~NILl~~~~~--~kl~DFGla~~ 564 (577)
.+.++|+|+++.|||+++++. +.|.||+.+..
T Consensus 194 ~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 194 IPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred ChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 246999999999999997753 68999999874
No 398
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.10 E-value=2.3e-10 Score=115.97 Aligned_cols=145 Identities=17% Similarity=0.208 Sum_probs=120.4
Q ss_pred CCcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCC-------------cCCCCC---------------------
Q 008121 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHD-------------TIPYQL--------------------- 127 (577)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~-------------~~p~~~--------------------- 127 (577)
...++.|+|++ +++..-+.+|.++++|+.|+|++|.+.. .+|...
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 46788999999 8887777889999999999999997631 112111
Q ss_pred ----------------------------------------------CCCccEEEccCCcCCCcCCCCccCCCCccEEEec
Q 008121 128 ----------------------------------------------PPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (577)
Q Consensus 128 ----------------------------------------------~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (577)
.++|+.|+|++|+++...+..|.++.+|+.|+|.
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 3589999999999997777899999999999999
Q ss_pred cCCCcccccccccCCCCCc-EEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccc-cCCCCC-ccEEE
Q 008121 162 RNSLTQSIGDIFGNLAGLA-TLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSGLP-LTTLN 229 (577)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~L~ 229 (577)
+| ++.+.+.+|.++++|+ .|+|.+ +++..-+..|.+|++|+.|++++|+++...+ +|...+ |+.++
T Consensus 259 ~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 259 HN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred cc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 98 8877788999999999 999999 7875667899999999999999999998765 576664 77775
No 399
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.05 E-value=1.6e-11 Score=134.58 Aligned_cols=127 Identities=16% Similarity=0.112 Sum_probs=82.0
Q ss_pred CcEEEEEcCCCCCcccccccccCC--CCCCEEEccCCC-cCC-cCCCC--CCCCccEEEccCCcCCCc----CCCCccCC
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDL--LSLRKFDLSGNS-IHD-TIPYQ--LPPNLTSLNLASNNFSGN----LPYSIASM 152 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l--~~L~~L~Ls~N~-l~~-~~p~~--~~~~L~~L~l~~N~l~~~----~p~~~~~l 152 (577)
..++.|+|++|.+++..+..++.+ .+|++|+|++|. ++. .++.. -.++|++|+|++|.+++. ++..+..+
T Consensus 112 ~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~ 191 (592)
T 3ogk_B 112 RQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHN 191 (592)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHC
T ss_pred CCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcC
Confidence 568888888888877666666654 447888887776 221 01100 126788888888877655 33344567
Q ss_pred CCccEEEeccCCCc----ccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccC
Q 008121 153 VSLSYLNVSRNSLT----QSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQN 210 (577)
Q Consensus 153 ~~L~~L~L~~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 210 (577)
++|++|+|++|.++ +.++..+.++++|+.|+|++|.+.+ +|..+..+++|++|++++
T Consensus 192 ~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 192 TSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp CCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECB
T ss_pred CCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccc
Confidence 77788888877776 3445556677777888887777764 555555666666666653
No 400
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.95 E-value=1.7e-10 Score=126.46 Aligned_cols=102 Identities=12% Similarity=0.126 Sum_probs=66.2
Q ss_pred cEEEEEcCCCC-Ccc-cccccccCCCCCCEEEccCCCcCCcCCC----CC--CCCccEEEccCCcCC----CcCCCCccC
Q 008121 84 AVVSIDISGLG-LSG-TMGYLLSDLLSLRKFDLSGNSIHDTIPY----QL--PPNLTSLNLASNNFS----GNLPYSIAS 151 (577)
Q Consensus 84 ~v~~l~l~~~~-l~g-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~----~~--~~~L~~L~l~~N~l~----~~~p~~~~~ 151 (577)
+++.|+|+++. ++. .++..+..+++|++|+|++|.+++.-+. .. .++|++|+|++|.++ +.++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 38888888775 211 1233344778888888888887654211 11 277888888888886 334445567
Q ss_pred CCCccEEEeccCCCcccccccccCCCCCcEEeCcC
Q 008121 152 MVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSF 186 (577)
Q Consensus 152 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 186 (577)
+++|+.|+|++|.+.+ +|..+.++++|++|++++
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECB
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccc
Confidence 7888888888887775 556666666677666664
No 401
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.88 E-value=4.6e-11 Score=116.29 Aligned_cols=141 Identities=17% Similarity=0.205 Sum_probs=70.2
Q ss_pred CCCCCCccEEeeCC--cEEEEEcCC---CCCccccc-ccccCCCCCCEEEccCCCcCCcCCCC-CC--CCccE--EEccC
Q 008121 70 PCGESWKGVACEGS--AVVSIDISG---LGLSGTMG-YLLSDLLSLRKFDLSGNSIHDTIPYQ-LP--PNLTS--LNLAS 138 (577)
Q Consensus 70 ~c~~~w~gv~C~~~--~v~~l~l~~---~~l~g~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~--~~L~~--L~l~~ 138 (577)
.| +|.|+.|+.. +|..+...+ ..+.|.+. ..+..++. .|...+|..++.++.+ +. +.|.. ++++.
T Consensus 77 l~--~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~ 152 (267)
T 3rw6_A 77 LK--AVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVL 152 (267)
T ss_dssp HH--HTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCT
T ss_pred HH--hcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccC
Confidence 45 7999999754 665554443 22333332 22222222 2222233322222211 11 23333 45555
Q ss_pred CcCC---CcCCCCccCCCCccEEEeccCCCcc--cccccccCCCCCcEEeCcCCcccCCCCCCccCCC--CCCeEEccCc
Q 008121 139 NNFS---GNLPYSIASMVSLSYLNVSRNSLTQ--SIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLS--NISSLYLQNN 211 (577)
Q Consensus 139 N~l~---~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~--~L~~L~l~~N 211 (577)
|+.. +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|
T Consensus 153 N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~N 230 (267)
T 3rw6_A 153 NRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGN 230 (267)
T ss_dssp TSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTS
T ss_pred CHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCC
Confidence 5322 2222222345666666666666666 3445556666666666666666643 2333333 6666677777
Q ss_pred ccccc
Q 008121 212 QVTGS 216 (577)
Q Consensus 212 ~l~~~ 216 (577)
.|.+.
T Consensus 231 pl~~~ 235 (267)
T 3rw6_A 231 SLCDT 235 (267)
T ss_dssp TTGGG
T ss_pred cCccc
Confidence 66653
No 402
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.84 E-value=1.1e-10 Score=128.14 Aligned_cols=128 Identities=14% Similarity=0.141 Sum_probs=87.5
Q ss_pred CCcEEEEEcCCCCCccccccccc-CCCCCCEEEccCC-CcCCc-CCCCC--CCCccEEEccCCcCCCcCCCCcc----CC
Q 008121 82 GSAVVSIDISGLGLSGTMGYLLS-DLLSLRKFDLSGN-SIHDT-IPYQL--PPNLTSLNLASNNFSGNLPYSIA----SM 152 (577)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~~~-~l~~L~~L~Ls~N-~l~~~-~p~~~--~~~L~~L~l~~N~l~~~~p~~~~----~l 152 (577)
..+++.|+|+++.+++..+..+. .+++|++|+|++| .++.. ++... .++|++|+|++|.+++..+..+. .+
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 45788999999998887777775 6889999999988 55532 22211 27899999999988765544443 56
Q ss_pred CCccEEEeccCC--Ccc-cccccccCCCCCcEEeCcCC-cccCCCCCCccCCCCCCeEEccC
Q 008121 153 VSLSYLNVSRNS--LTQ-SIGDIFGNLAGLATLDLSFN-NFSGDLPNSFISLSNISSLYLQN 210 (577)
Q Consensus 153 ~~L~~L~L~~N~--l~~-~~p~~~~~l~~L~~L~Ls~N-~l~g~~p~~~~~l~~L~~L~l~~ 210 (577)
++|+.|+|++|. ++. .++..+.++++|+.|+|++| .+++ +|..+..+++|++|+++.
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~ 244 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGG 244 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSB
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEccccc
Confidence 689999998886 331 12223345788888888887 4443 555555666666666443
No 403
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.75 E-value=1.2e-10 Score=127.82 Aligned_cols=171 Identities=15% Similarity=0.080 Sum_probs=101.2
Q ss_pred CcEEEEEcCCCCCccccc-ccccCCCCCCEEEccCCCcCCcCCCCC---CCCccEEEc---------cCCcCCCcCCCCc
Q 008121 83 SAVVSIDISGLGLSGTMG-YLLSDLLSLRKFDLSGNSIHDTIPYQL---PPNLTSLNL---------ASNNFSGNLPYSI 149 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~~L~~L~l---------~~N~l~~~~p~~~ 149 (577)
.+++.|+|++|.+++... ..+..+++|++|+|++| ++......+ .++|++|+| +.|.+++.....+
T Consensus 289 ~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l 367 (594)
T 2p1m_B 289 SRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSV 367 (594)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHH
T ss_pred CCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHH
Confidence 689999999999876533 34668899999999988 442111111 267888887 3345554322223
Q ss_pred c-CCCCccEEEeccCCCccccccccc-CCCCCcEEeCc--C----CcccCCCC------CCccCCCCCCeEEccCccccc
Q 008121 150 A-SMVSLSYLNVSRNSLTQSIGDIFG-NLAGLATLDLS--F----NNFSGDLP------NSFISLSNISSLYLQNNQVTG 215 (577)
Q Consensus 150 ~-~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~g~~p------~~~~~l~~L~~L~l~~N~l~~ 215 (577)
. .+++|+.|+++.|++++.....+. .+++|+.|+|+ + |++++ .| ..+..+++|++|+|++ .+++
T Consensus 368 ~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~-~~~~~~~~~l~~~~~~L~~L~L~~-~l~~ 445 (594)
T 2p1m_B 368 SMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL-EPLDIGFGAIVEHCKDLRRLSLSG-LLTD 445 (594)
T ss_dssp HHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC-CCTHHHHHHHHHHCTTCCEEECCS-SCCH
T ss_pred HHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC-CchhhHHHHHHhhCCCccEEeecC-cccH
Confidence 2 367777777777777766555554 47777777777 3 55552 22 1144566677777755 4443
Q ss_pred c-cccCC--CCCccEEEeecCccccccCc----ccccccceeecCCcC
Q 008121 216 S-LNVFS--GLPLTTLNVANNHFSGWIPR----ELISIRTFIYDGNSF 256 (577)
Q Consensus 216 ~-~~~~~--~~~L~~L~l~~N~l~g~~p~----~l~~l~~l~~~~n~~ 256 (577)
. +..+. ...|+.|+|++|.+++..+. .+.+++.|++++|++
T Consensus 446 ~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 446 KVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp HHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred HHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 2 11111 12366666666666554332 234566666666665
No 404
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.71 E-value=5.6e-08 Score=97.88 Aligned_cols=137 Identities=15% Similarity=0.167 Sum_probs=100.8
Q ss_pred CCCccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCC----CceeeEeeEEEeCCeEEEE
Q 008121 411 SFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH----PNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 411 ~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H----~niv~l~~~~~~~~~~~lv 486 (577)
.+...+.++.|....||+. +..+++|+... ......+.+|.+++..+.+ ..+.+++++ +..++|
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~----~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lv 105 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR----DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNI 105 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc----HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEE
Confidence 4556678999999999998 66788887642 2224558889988888866 224455554 466899
Q ss_pred EEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC---------------------------------
Q 008121 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL--------------------------------- 533 (577)
Q Consensus 487 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~--------------------------------- 533 (577)
|||++|.++.+... ..++..++..++.++++.|+.||+...
T Consensus 106 me~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (320)
T 3r70_A 106 MKYIKGERITYEQY------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQ 179 (320)
T ss_dssp EECCCCBCCCHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTT
T ss_pred EeecCCcccccccc------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcc
Confidence 99999988864321 235666777788888888888885422
Q ss_pred ---------------------------CCeeecCCCCCCeeeCCCCCeEEeccccCccc
Q 008121 534 ---------------------------PSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (577)
Q Consensus 534 ---------------------------~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~ 565 (577)
+.++|+|++|.|||++++..+.|+||+.+..-
T Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 180 LLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp CCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred cccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23599999999999999766799999998753
No 405
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.65 E-value=1.4e-07 Score=97.95 Aligned_cols=125 Identities=15% Similarity=0.186 Sum_probs=78.1
Q ss_pred cEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCCC--CCccEEEccCCcCCCcCCCCccCCCCccEEEec
Q 008121 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (577)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (577)
.++.|.|.+ .++..-+.+|.++++|+.++|++|+++ .+|.... .+|+.+.|.+| ++..-...|.++++|+.++|.
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~ 234 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIP 234 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecC
Confidence 466777765 666566677888888888888888887 3443322 67777777744 665556677777777777776
Q ss_pred cCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccc
Q 008121 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVT 214 (577)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 214 (577)
+| ++..-..+|.+ .+|+.+.| .|.++..-+..|.+|++|+.+++.+|.+.
T Consensus 235 ~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 235 EN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp TT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCC
T ss_pred CC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCcccc
Confidence 64 44444444555 55666665 33344333445556666666666555544
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.65 E-value=4e-09 Score=107.82 Aligned_cols=155 Identities=15% Similarity=0.170 Sum_probs=83.1
Q ss_pred CcEEEEEcCCCCC---------cccccccccCCCCCCEEEccCCCcCCcCCCCCCCCccEEEccCCcCCCcCCCCcc--C
Q 008121 83 SAVVSIDISGLGL---------SGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIA--S 151 (577)
Q Consensus 83 ~~v~~l~l~~~~l---------~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~--~ 151 (577)
.+++.|.+.++.. .+.++..+..+++|+.|+|++|.-. .+|..-.++|+.|+|..|.++...-..+. .
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~~~~~~L~~L~L~~~~l~~~~l~~l~~~~ 217 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGKKPRPNLKSLEIISGGLPDSVVEDILGSD 217 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCSCBCTTCSEEEEECSBCCHHHHHHHHHSB
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eeccccCCCCcEEEEecCCCChHHHHHHHHcc
Confidence 4666676655432 1224445566677777777776311 22221136777777777766543323333 5
Q ss_pred CCCccEEEecc--CCCccc-----ccccc--cCCCCCcEEeCcCCcccCCCCCCcc---CCCCCCeEEccCccccccc--
Q 008121 152 MVSLSYLNVSR--NSLTQS-----IGDIF--GNLAGLATLDLSFNNFSGDLPNSFI---SLSNISSLYLQNNQVTGSL-- 217 (577)
Q Consensus 152 l~~L~~L~L~~--N~l~~~-----~p~~~--~~l~~L~~L~Ls~N~l~g~~p~~~~---~l~~L~~L~l~~N~l~~~~-- 217 (577)
+++|+.|+|+. |...+. +...+ ..+++|++|+|++|.+++..+..+. .+++|++|+|+.|.|.+.-
T Consensus 218 lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~ 297 (362)
T 2ra8_A 218 LPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGAR 297 (362)
T ss_dssp CTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHH
T ss_pred CCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHH
Confidence 67777777753 221111 11112 2467777777777776643322222 3567777777777776521
Q ss_pred --c-cCCC-CCccEEEeecCccccc
Q 008121 218 --N-VFSG-LPLTTLNVANNHFSGW 238 (577)
Q Consensus 218 --~-~~~~-~~L~~L~l~~N~l~g~ 238 (577)
. .+.. ..|+.|+|++|.|+..
T Consensus 298 ~L~~~L~~l~~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 298 LLLDHVDKIKHLKFINMKYNYLSDE 322 (362)
T ss_dssp HHHTTHHHHTTCSEEECCSBBCCHH
T ss_pred HHHhhcccCCcceEEECCCCcCCHH
Confidence 1 1111 2377777777776643
No 407
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.63 E-value=2.5e-07 Score=96.12 Aligned_cols=166 Identities=12% Similarity=0.116 Sum_probs=113.9
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCC-CCC--CCccEEEccCCcCCCcCCCCccCCCCccEEE
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPY-QLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 159 (577)
..++.|+|++|+++......|. ..+|+.+.|.+| ++ .++. .|. ++|+.|+|..| ++..-..+|.+ .+|+.+.
T Consensus 180 ~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~-~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~ 254 (401)
T 4fdw_A 180 YNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LK-EIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVK 254 (401)
T ss_dssp TTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CC-EECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEE
T ss_pred ccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hh-eehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEE
Confidence 5788999999988866556666 588999998854 65 3443 332 68888888875 55455566766 6888888
Q ss_pred eccCCCcccccccccCCCCCcEEeCcCCccc-----CCCCCCccCCCCCCeEEccCccccccc-ccCCCC-CccEEEeec
Q 008121 160 VSRNSLTQSIGDIFGNLAGLATLDLSFNNFS-----GDLPNSFISLSNISSLYLQNNQVTGSL-NVFSGL-PLTTLNVAN 232 (577)
Q Consensus 160 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----g~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~-~L~~L~l~~ 232 (577)
| .|+++..-+..|.++++|+.+++.+|.+. ..-+..|.+|++|+.++|.+ .++... .+|... .|+.++|..
T Consensus 255 l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~ 332 (401)
T 4fdw_A 255 L-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPA 332 (401)
T ss_dssp E-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECT
T ss_pred e-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECc
Confidence 8 56677666778888888888888887765 34456788888888888884 465543 346554 488888865
Q ss_pred CccccccCcccc--cccceeecCCcC
Q 008121 233 NHFSGWIPRELI--SIRTFIYDGNSF 256 (577)
Q Consensus 233 N~l~g~~p~~l~--~l~~l~~~~n~~ 256 (577)
| ++..-+..|. +++.+.+.+|..
T Consensus 333 ~-l~~I~~~aF~~~~L~~l~l~~n~~ 357 (401)
T 4fdw_A 333 N-VTQINFSAFNNTGIKEVKVEGTTP 357 (401)
T ss_dssp T-CCEECTTSSSSSCCCEEEECCSSC
T ss_pred c-ccEEcHHhCCCCCCCEEEEcCCCC
Confidence 5 5522233332 566777777643
No 408
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.61 E-value=5.6e-08 Score=97.08 Aligned_cols=137 Identities=22% Similarity=0.260 Sum_probs=98.5
Q ss_pred cceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCC-CCc--eeeEeeEEEeCC---eEEEEEE
Q 008121 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPN--IVTLAGYCAEHG---QRLLVYE 488 (577)
Q Consensus 415 ~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-H~n--iv~l~~~~~~~~---~~~lv~e 488 (577)
.+.++.|.+..||+.. ..+++|+... ......+.+|.++++.+. +.. +.+++.+....+ ..|+|||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~----~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~ 96 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKH----SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFT 96 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESS----HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCC----cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEc
Confidence 4568999999999863 5678887542 234567889999998873 333 344554443332 3489999
Q ss_pred ecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC------------------------------------
Q 008121 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC------------------------------------ 532 (577)
Q Consensus 489 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~------------------------------------ 532 (577)
|++|..|.+... ..++..++..++.++++.++.||+..
T Consensus 97 ~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 97 KIKGVPLTPLLL------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp CCCCEECCHHHH------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred ccCCeECCcccc------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 999987765332 23567777888888888888888611
Q ss_pred -------------------CCCeeecCCCCCCeeeCC--CCCeEEeccccCccc
Q 008121 533 -------------------LPSVVHRNFKSANILLDD--ELNPHLSDCGLAALT 565 (577)
Q Consensus 533 -------------------~~~ivHrDlk~~NILl~~--~~~~kl~DFGla~~~ 565 (577)
.+.++|+|+++.||++++ ...+.|+||+.+..-
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~ 224 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS 224 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence 145899999999999998 556889999998754
No 409
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.60 E-value=1.8e-09 Score=99.74 Aligned_cols=117 Identities=14% Similarity=0.144 Sum_probs=63.2
Q ss_pred cccccccCCCCCCEEEccCC-CcCCc----CCCCC--CCCccEEEccCCcCCCc----CCCCccCCCCccEEEeccCCCc
Q 008121 98 TMGYLLSDLLSLRKFDLSGN-SIHDT----IPYQL--PPNLTSLNLASNNFSGN----LPYSIASMVSLSYLNVSRNSLT 166 (577)
Q Consensus 98 ~~~~~~~~l~~L~~L~Ls~N-~l~~~----~p~~~--~~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 166 (577)
.+...+...+.|++|+|++| .|... +...+ .++|++|+|++|+|... +...+...++|++|+|++|+|+
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34455666777777777777 66532 11111 15566666666666531 2233344456666666666666
Q ss_pred cc----ccccccCCCCCcEEeC--cCCcccCC----CCCCccCCCCCCeEEccCcccc
Q 008121 167 QS----IGDIFGNLAGLATLDL--SFNNFSGD----LPNSFISLSNISSLYLQNNQVT 214 (577)
Q Consensus 167 ~~----~p~~~~~l~~L~~L~L--s~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~ 214 (577)
.. +...+...++|++|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 42 3444555566666666 55666532 1222333455666666655543
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.55 E-value=4.2e-08 Score=100.29 Aligned_cols=171 Identities=15% Similarity=0.169 Sum_probs=113.3
Q ss_pred CcEEEEEcCCCCCcc-c-------ccccccCCCCCCEEEccCCCcCC---------cCCCCC--CCCccEEEccCCcCCC
Q 008121 83 SAVVSIDISGLGLSG-T-------MGYLLSDLLSLRKFDLSGNSIHD---------TIPYQL--PPNLTSLNLASNNFSG 143 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g-~-------~~~~~~~l~~L~~L~Ls~N~l~~---------~~p~~~--~~~L~~L~l~~N~l~~ 143 (577)
.+|+.|.+......| . +..++..+++|+.|.+..+.+.. .++..+ .++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 467888887666553 2 23446678999999998765421 111111 279999999988311
Q ss_pred cCCCCccCCCCccEEEeccCCCccccccccc--CCCCCcEEeCcC--CcccCC-----CCCCc--cCCCCCCeEEccCcc
Q 008121 144 NLPYSIASMVSLSYLNVSRNSLTQSIGDIFG--NLAGLATLDLSF--NNFSGD-----LPNSF--ISLSNISSLYLQNNQ 212 (577)
Q Consensus 144 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~--N~l~g~-----~p~~~--~~l~~L~~L~l~~N~ 212 (577)
.++. +. +++|+.|+|..|.++...-..+. .+++|+.|+|+. |...|. +...+ ..+++|++|+|.+|.
T Consensus 186 ~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~ 263 (362)
T 2ra8_A 186 SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAE 263 (362)
T ss_dssp BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCT
T ss_pred eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCC
Confidence 2343 43 89999999999998755444444 789999999863 332222 11122 257899999999999
Q ss_pred cccccc-c---CCCC-CccEEEeecCccccc----cCc---ccccccceeecCCcC
Q 008121 213 VTGSLN-V---FSGL-PLTTLNVANNHFSGW----IPR---ELISIRTFIYDGNSF 256 (577)
Q Consensus 213 l~~~~~-~---~~~~-~L~~L~l~~N~l~g~----~p~---~l~~l~~l~~~~n~~ 256 (577)
+.+... . ...+ .|+.|+|+.|.|++. ++. .+.+++.|++++|.+
T Consensus 264 i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i 319 (362)
T 2ra8_A 264 EQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYL 319 (362)
T ss_dssp THHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBC
T ss_pred CchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcC
Confidence 875321 1 1123 399999999999874 333 356788888888765
No 411
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.53 E-value=1.5e-08 Score=98.58 Aligned_cols=102 Identities=22% Similarity=0.217 Sum_probs=75.3
Q ss_pred ccCCCCCCE--EEccCCCcCCcCCC------CCCCCccEEEccCCcCCC--cCCCCccCCCCccEEEeccCCCccccccc
Q 008121 103 LSDLLSLRK--FDLSGNSIHDTIPY------QLPPNLTSLNLASNNFSG--NLPYSIASMVSLSYLNVSRNSLTQSIGDI 172 (577)
Q Consensus 103 ~~~l~~L~~--L~Ls~N~l~~~~p~------~~~~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 172 (577)
|...+.|.. ++++.|+.. .++. .-.++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..
T Consensus 137 l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~ 213 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RE 213 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GG
T ss_pred cCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hh
Confidence 555555665 777888544 2221 112789999999999997 5667788899999999999999976 23
Q ss_pred ccCCC--CCcEEeCcCCcccCCCCC-------CccCCCCCCeEE
Q 008121 173 FGNLA--GLATLDLSFNNFSGDLPN-------SFISLSNISSLY 207 (577)
Q Consensus 173 ~~~l~--~L~~L~Ls~N~l~g~~p~-------~~~~l~~L~~L~ 207 (577)
+..+. +|++|+|++|.+++.+|. .+..+++|+.||
T Consensus 214 l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 214 LDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 44444 899999999999987773 356788888876
No 412
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.51 E-value=1.1e-08 Score=94.39 Aligned_cols=109 Identities=21% Similarity=0.317 Sum_probs=86.6
Q ss_pred CCcEEEEEcCCC-CCccc----ccccccCCCCCCEEEccCCCcCCcC----CCCCC--CCccEEEccCCcCCCc----CC
Q 008121 82 GSAVVSIDISGL-GLSGT----MGYLLSDLLSLRKFDLSGNSIHDTI----PYQLP--PNLTSLNLASNNFSGN----LP 146 (577)
Q Consensus 82 ~~~v~~l~l~~~-~l~g~----~~~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~--~~L~~L~l~~N~l~~~----~p 146 (577)
...++.|+|++| .|... +...+...++|++|+|++|+|...- ...+. ++|++|+|++|.|+.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 568999999999 88653 4556777899999999999997421 11121 6899999999999853 45
Q ss_pred CCccCCCCccEEEe--ccCCCccc----ccccccCCCCCcEEeCcCCccc
Q 008121 147 YSIASMVSLSYLNV--SRNSLTQS----IGDIFGNLAGLATLDLSFNNFS 190 (577)
Q Consensus 147 ~~~~~l~~L~~L~L--~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 190 (577)
..+...++|++|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 66777889999999 88999854 3455666799999999999986
No 413
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.48 E-value=1.1e-06 Score=87.84 Aligned_cols=137 Identities=19% Similarity=0.156 Sum_probs=94.0
Q ss_pred cceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCC---ceeeEeeEEE-eCCeEEEEEEec
Q 008121 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHP---NIVTLAGYCA-EHGQRLLVYEYV 490 (577)
Q Consensus 415 ~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~~~~~-~~~~~~lv~e~~ 490 (577)
.+.++.|....||+. +..+++|+-.. ......+.+|.++|..+.+. .+.+.+.++. ..+..++||||+
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i 95 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKV 95 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEecc
Confidence 456888888899987 56778887432 23456788999999998753 3556677764 455678999999
Q ss_pred CCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 008121 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV--------------------------------------- 531 (577)
Q Consensus 491 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~--------------------------------------- 531 (577)
+|..+.+... ..++..++..++.++++.|+.||+.
T Consensus 96 ~G~~l~~~~~------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 96 QGQILGEDGM------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp CSEECHHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred CCeECchhhh------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 9987765321 1234444445555555555555532
Q ss_pred ------------------CCCCeeecCCCCCCeeeCC---CCC-eEEeccccCccc
Q 008121 532 ------------------CLPSVVHRNFKSANILLDD---ELN-PHLSDCGLAALT 565 (577)
Q Consensus 532 ------------------~~~~ivHrDlk~~NILl~~---~~~-~kl~DFGla~~~ 565 (577)
..+.++|+|+++.||++++ ++. +.|+||+.+..-
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 2235799999999999987 455 489999988753
No 414
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.45 E-value=4.8e-07 Score=89.51 Aligned_cols=143 Identities=22% Similarity=0.300 Sum_probs=92.5
Q ss_pred ccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCC---ceeeEeeEEEeCCeEEEEEEec
Q 008121 414 QEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHP---NIVTLAGYCAEHGQRLLVYEYV 490 (577)
Q Consensus 414 ~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~~~~~~~~~~~lv~e~~ 490 (577)
..+.|+.|.++.||+++..+|+.++||+..... ......|..|.+.|+.+++. .+.+++++. ..++||||+
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~--~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l 92 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCC--cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEec
Confidence 356799999999999999899999999964321 11235688999999999875 477777763 368999999
Q ss_pred CCCCHHH--------h---hhhccCCC-----------------CCCCHHHHH---HH-----------------HHHHH
Q 008121 491 GNGNLHD--------M---LHFADDSS-----------------KNLTWNARV---RV-----------------ALGTA 522 (577)
Q Consensus 491 ~~g~L~~--------~---l~~~~~~~-----------------~~l~~~~~~---~i-----------------~~~i~ 522 (577)
+++.+.. . ||...... ..-+|.... ++ ...+-
T Consensus 93 ~g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~ 172 (288)
T 3d1u_A 93 DERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVE 172 (288)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHH
T ss_pred ccCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 9987421 1 23211100 011343221 11 11111
Q ss_pred HHHHHHh----cCCCCCeeecCCCCCCeeeCCCCCeEEeccccCcc
Q 008121 523 RALEYLH----EVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (577)
Q Consensus 523 ~~L~yLH----~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~ 564 (577)
+.++.+. ....+.++|+|+.+.||+++.+ .+.|.|| .+..
T Consensus 173 ~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~~ 216 (288)
T 3d1u_A 173 KVLDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAHG 216 (288)
T ss_dssp HHHHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCEE
T ss_pred HHHHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcCC
Confidence 2222232 2234689999999999999884 5889999 6553
No 415
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.44 E-value=1.3e-06 Score=85.33 Aligned_cols=136 Identities=15% Similarity=0.160 Sum_probs=95.4
Q ss_pred eeccCccc-eEEEEEEc-CCcEEEEEEccccccchHHHHHHHHHHHHhhcCC-CCceeeEeeEEEeCCeEEEEEEecCCC
Q 008121 417 LIGEGSLG-RVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLLVYEYVGNG 493 (577)
Q Consensus 417 ~lg~G~fg-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~~g 493 (577)
.+..|..| .||+.... ++..+++|+-.. ....++.+|...|+.+. +--+.++++++.+.+..++|||++++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~ 105 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG-----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK 105 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET-----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC-----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence 45566666 68987654 456788887542 23456788888887764 333668889999999999999999998
Q ss_pred CHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----------------------------------------
Q 008121 494 NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC----------------------------------------- 532 (577)
Q Consensus 494 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~----------------------------------------- 532 (577)
++.+.... .......+..++++.|.-||...
T Consensus 106 ~~~~~~~~--------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (272)
T 4gkh_A 106 TAFQVLEE--------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVE 177 (272)
T ss_dssp EHHHHHHH--------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHH
T ss_pred cccccccC--------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHH
Confidence 87765431 11123345556666666666421
Q ss_pred --------------CCCeeecCCCCCCeeeCCCCCeEEeccccCccc
Q 008121 533 --------------LPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (577)
Q Consensus 533 --------------~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~ 565 (577)
.+.++|+|+.+.|||+++++.+-|+||+.+..-
T Consensus 178 ~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~g 224 (272)
T 4gkh_A 178 QVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIA 224 (272)
T ss_dssp HHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccC
Confidence 123799999999999998877789999988753
No 416
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.33 E-value=1.9e-06 Score=88.14 Aligned_cols=144 Identities=18% Similarity=0.214 Sum_probs=89.5
Q ss_pred ccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCc--eeeEeeEEEeC-CeEEEEEEec
Q 008121 414 QEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN--IVTLAGYCAEH-GQRLLVYEYV 490 (577)
Q Consensus 414 ~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~~~~~~~-~~~~lv~e~~ 490 (577)
..+.++.|....+|+... ++..+++|..... ..+..|..++..+.... +.++++++... +..|+||||+
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l 116 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA 116 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence 456789999999999875 5788889886432 14777888888776433 45677776654 6789999999
Q ss_pred CCCCHHHh------------------hhhccCCC----------C---CCCHHHH---------------------HHHH
Q 008121 491 GNGNLHDM------------------LHFADDSS----------K---NLTWNAR---------------------VRVA 518 (577)
Q Consensus 491 ~~g~L~~~------------------l~~~~~~~----------~---~l~~~~~---------------------~~i~ 518 (577)
+|..+.+. ||...... . .-.|... ....
T Consensus 117 ~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 196 (362)
T 3ovc_A 117 QGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVA 196 (362)
T ss_dssp CSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccch
Confidence 97655321 11110000 0 0011111 0111
Q ss_pred HHHHHHHHHHhcCC-CCCeeecCCCCCCeeeCCCCCeEEeccccCccc
Q 008121 519 LGTARALEYLHEVC-LPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (577)
Q Consensus 519 ~~i~~~L~yLH~~~-~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~ 565 (577)
..+..-++++.... .+.++|+|+++.||++++++.+.|+||+.+..-
T Consensus 197 ~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 197 QALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 12222223332211 146899999999999988777889999988753
No 417
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.17 E-value=1.6e-06 Score=88.41 Aligned_cols=81 Identities=6% Similarity=-0.039 Sum_probs=53.0
Q ss_pred cee-ccCccceEEEEEEc-------CCcEEEEEEcccccc-chHHHHHHHHHHHHhhcCCC---CceeeEeeEEEeC---
Q 008121 416 FLI-GEGSLGRVYRAEFA-------NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRH---PNIVTLAGYCAEH--- 480 (577)
Q Consensus 416 ~~l-g~G~fg~Vy~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H---~niv~l~~~~~~~--- 480 (577)
+.| +.|....+|+.... ++..+++|+...... .......+.+|..+++.+.. -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 88989999998764 267788887653220 00011345667777776642 3466778777655
Q ss_pred CeEEEEEEecCCCCHH
Q 008121 481 GQRLLVYEYVGNGNLH 496 (577)
Q Consensus 481 ~~~~lv~e~~~~g~L~ 496 (577)
+..++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3568999999986654
No 418
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.08 E-value=2.5e-05 Score=78.76 Aligned_cols=142 Identities=17% Similarity=0.268 Sum_probs=79.3
Q ss_pred ceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhc-----CCCCceeeEe-e--EEEeCCeEEEEE
Q 008121 416 FLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR-----LRHPNIVTLA-G--YCAEHGQRLLVY 487 (577)
Q Consensus 416 ~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~-----l~H~niv~l~-~--~~~~~~~~~lv~ 487 (577)
+.|+.|..+.||+....+| .+++|+.... .. ++..|.+++.. +..|.++... | +....+..+++|
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~---~~---~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~ 110 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP---EK---KALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVY 110 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC---HH---HHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC---HH---HHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEE
Confidence 4566677899999987655 4889988642 11 22233333333 2334444311 1 123466789999
Q ss_pred EecCCCCHH--------------HhhhhccC-C--C-------CCCCHHHH-----------------------------
Q 008121 488 EYVGNGNLH--------------DMLHFADD-S--S-------KNLTWNAR----------------------------- 514 (577)
Q Consensus 488 e~~~~g~L~--------------~~l~~~~~-~--~-------~~l~~~~~----------------------------- 514 (577)
||++|..+. ..+|.... . . ..-.|...
T Consensus 111 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 190 (346)
T 2q83_A 111 DWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQ 190 (346)
T ss_dssp ECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred EeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHH
Confidence 999986542 11221111 0 0 01123221
Q ss_pred --HHHHHHHHHHHHHHhc----------CCCCCeeecCCCCCCeeeCCCCCeEEeccccCcc
Q 008121 515 --VRVALGTARALEYLHE----------VCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (577)
Q Consensus 515 --~~i~~~i~~~L~yLH~----------~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~ 564 (577)
..+..++.+++++|+. ...+.++|+|+++.|||++.++.+.|+||+.+..
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 0111234456777763 0234899999999999998888999999998864
No 419
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.87 E-value=7.2e-05 Score=74.50 Aligned_cols=140 Identities=15% Similarity=0.208 Sum_probs=91.9
Q ss_pred ccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCC---CCceeeEeeEEEeCCeEEEEEEec
Q 008121 414 QEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR---HPNIVTLAGYCAEHGQRLLVYEYV 490 (577)
Q Consensus 414 ~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~~~~~~~~~~~lv~e~~ 490 (577)
..+.|+.|.+..+|+... ++..+++|+.... ....|..|.+.|+.+. ...+.++++++...+..++||||+
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l 113 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL 113 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence 356799999999999876 4667888876432 3556788888887773 356788888888888899999999
Q ss_pred CCCCHHH-----------hhhhccC-CC-----------------CCCCHHHHH---HHHHH----------------HH
Q 008121 491 GNGNLHD-----------MLHFADD-SS-----------------KNLTWNARV---RVALG----------------TA 522 (577)
Q Consensus 491 ~~g~L~~-----------~l~~~~~-~~-----------------~~l~~~~~~---~i~~~----------------i~ 522 (577)
++..+.. .||.... .. -.-+|.... ++..+ +.
T Consensus 114 ~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~ 193 (312)
T 3jr1_A 114 NKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIV 193 (312)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHH
T ss_pred cCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Confidence 9876421 2332211 00 012454321 12111 11
Q ss_pred HH-HHHHhc-CCCCCeeecCCCCCCeeeCCCCCeEEeccc
Q 008121 523 RA-LEYLHE-VCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (577)
Q Consensus 523 ~~-L~yLH~-~~~~~ivHrDlk~~NILl~~~~~~kl~DFG 560 (577)
+. ...|.. ...|.+||+|+.+.|++++.++ +.|.||.
T Consensus 194 ~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 194 QIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11 223421 2356899999999999999887 8899984
No 420
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.84 E-value=4e-05 Score=79.28 Aligned_cols=77 Identities=17% Similarity=0.110 Sum_probs=48.1
Q ss_pred cceeccCccceEEEEEEc-CCcEEEEEEcccccc--ch---HHHHHHHHHHHHhhcCCC--Cc-eeeEeeEEEeCCeEEE
Q 008121 415 EFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL--SL---QEEDNFLEAVSNMSRLRH--PN-IVTLAGYCAEHGQRLL 485 (577)
Q Consensus 415 ~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~---~~~~~~~~e~~~l~~l~H--~n-iv~l~~~~~~~~~~~l 485 (577)
.+.+|.|.++.||++... +++.++||....... .. ...+++..|.++++.+.. +. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457999999999999754 467899997643211 00 112346678888776632 33 4456544 3445689
Q ss_pred EEEecCCC
Q 008121 486 VYEYVGNG 493 (577)
Q Consensus 486 v~e~~~~g 493 (577)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
No 421
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.77 E-value=4.1e-05 Score=65.73 Aligned_cols=56 Identities=20% Similarity=0.310 Sum_probs=42.2
Q ss_pred EEEccCCCcC-CcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEeccCCCc
Q 008121 111 KFDLSGNSIH-DTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLT 166 (577)
Q Consensus 111 ~L~Ls~N~l~-~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 166 (577)
.+|.++++|+ ..+|..++++|++|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5666677765 4577777788888888888888666677777888888888877664
No 422
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.60 E-value=0.00026 Score=73.79 Aligned_cols=75 Identities=13% Similarity=0.117 Sum_probs=44.8
Q ss_pred cceeccCccceEEEEEEcCCcEEEEEEcccccc--ch-----HHHHHHHHHHHHhh-cCCCCceeeEeeEEEeCCeEEEE
Q 008121 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAAL--SL-----QEEDNFLEAVSNMS-RLRHPNIVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 415 ~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~-----~~~~~~~~e~~~l~-~l~H~niv~l~~~~~~~~~~~lv 486 (577)
.+.+|.|..+.||++.. +++.++||....... .. .....+..|+..+. ......+.+++.+. .+..++|
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv 115 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIG 115 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEE
Confidence 46789999999999964 467889994321100 00 02223444433322 22234566777665 4567999
Q ss_pred EEec-CC
Q 008121 487 YEYV-GN 492 (577)
Q Consensus 487 ~e~~-~~ 492 (577)
|||+ ++
T Consensus 116 ~e~l~~g 122 (420)
T 2pyw_A 116 MRYLEPP 122 (420)
T ss_dssp ECCCCTT
T ss_pred EeecCCc
Confidence 9999 76
No 423
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.57 E-value=0.00012 Score=72.01 Aligned_cols=77 Identities=22% Similarity=0.289 Sum_probs=53.3
Q ss_pred CccceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCC---ceeeEeeEEEeCCeEEEEEEe
Q 008121 413 SQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHP---NIVTLAGYCAEHGQRLLVYEY 489 (577)
Q Consensus 413 ~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~~~~~~~~~~~lv~e~ 489 (577)
...+.+|.|..+.||+.+..||+.|++|+-..... .....|..|.+.|+.+.-. -+.+++++. ..++||||
T Consensus 18 ~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAP--ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC--CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred EEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCc--chhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 34567999999999999999999999998654321 1233477888888776421 244455432 23789999
Q ss_pred cCCCCH
Q 008121 490 VGNGNL 495 (577)
Q Consensus 490 ~~~g~L 495 (577)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987643
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.55 E-value=2.2e-05 Score=70.80 Aligned_cols=84 Identities=5% Similarity=0.086 Sum_probs=51.6
Q ss_pred CCccEEEccCCcCCCcCCCCccCCCCccEEEeccCC-CcccccccccCC----CCCcEEeCcCCc-ccCCCCCCccCCCC
Q 008121 129 PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNS-LTQSIGDIFGNL----AGLATLDLSFNN-FSGDLPNSFISLSN 202 (577)
Q Consensus 129 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~g~~p~~~~~l~~ 202 (577)
-+|+.|||+++.++..--..+.++++|++|+|+++. ++..-=..++.+ ++|++|+|+++. ++..-=..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 356666666666654333445677788888888874 664333334443 368888887763 65322234566777
Q ss_pred CCeEEccCcc
Q 008121 203 ISSLYLQNNQ 212 (577)
Q Consensus 203 L~~L~l~~N~ 212 (577)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 8888877764
No 425
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.48 E-value=5.9e-06 Score=76.00 Aligned_cols=87 Identities=17% Similarity=0.130 Sum_probs=44.5
Q ss_pred ccccCCCCCCEEEccCC-CcCCc----CCCCCC--CCccEEEccCCcCCCcCC----CCccCCCCccEEEeccCCCccc-
Q 008121 101 YLLSDLLSLRKFDLSGN-SIHDT----IPYQLP--PNLTSLNLASNNFSGNLP----YSIASMVSLSYLNVSRNSLTQS- 168 (577)
Q Consensus 101 ~~~~~l~~L~~L~Ls~N-~l~~~----~p~~~~--~~L~~L~l~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~- 168 (577)
..+.+-+.|+.|+|++| +|... +-..+. +.|+.|+|++|+|...-- +.+..-+.|++|+|++|+|+..
T Consensus 35 ~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~G 114 (197)
T 1pgv_A 35 RLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPEL 114 (197)
T ss_dssp HHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHH
T ss_pred HHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHH
Confidence 34455567777777774 66521 111111 566677777776653222 2222345566666666666532
Q ss_pred ---ccccccCCCCCcEEeCcCC
Q 008121 169 ---IGDIFGNLAGLATLDLSFN 187 (577)
Q Consensus 169 ---~p~~~~~l~~L~~L~Ls~N 187 (577)
+-..+..-+.|++|+|++|
T Consensus 115 a~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 115 LARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHHHhhCCceeEEECCCC
Confidence 2223333344666666543
No 426
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.42 E-value=0.00056 Score=70.51 Aligned_cols=130 Identities=13% Similarity=0.202 Sum_probs=73.7
Q ss_pred cccccCCCCCCEEEccCCCcCCcCCCC-C--CCCccEEEccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCC
Q 008121 100 GYLLSDLLSLRKFDLSGNSIHDTIPYQ-L--PPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNL 176 (577)
Q Consensus 100 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 176 (577)
..+|.++..|+.+.+.++..+ +... + .++|+.+.+. +.++..-...|.++.+|+.++|..| ++.+-..+|.++
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~--I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C 333 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS--IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGC 333 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE--ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTC
T ss_pred cceeeecccccEEecccccce--ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCC
Confidence 446777777888777655433 2221 2 2677777775 4455455567777788888887654 555555677778
Q ss_pred CCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccccCCCCCccEEEeecCcc
Q 008121 177 AGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHF 235 (577)
Q Consensus 177 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l 235 (577)
.+|+.+.|..+ ++..-..+|.+|++|+.+++.+|..... ..+....|+.+.+..|.+
T Consensus 334 ~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~~-~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 334 EQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQWN-AISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHHH-TCBCCCCC----------
T ss_pred CCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeehh-hhhccCCCCEEEeCCCCE
Confidence 88888877644 5533345677778888887777654321 112222366665555443
No 427
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.30 E-value=4.8e-05 Score=69.91 Aligned_cols=110 Identities=19% Similarity=0.257 Sum_probs=78.8
Q ss_pred eCCcEEEEEcCCC-CCcc----cccccccCCCCCCEEEccCCCcCCcCCCCCC------CCccEEEccCCcCCCc----C
Q 008121 81 EGSAVVSIDISGL-GLSG----TMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP------PNLTSLNLASNNFSGN----L 145 (577)
Q Consensus 81 ~~~~v~~l~l~~~-~l~g----~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~------~~L~~L~l~~N~l~~~----~ 145 (577)
.+..++.|+|++| +|.. .+...+..-+.|+.|+|++|+|...--..+. +.|+.|+|++|+|... +
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~al 118 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 118 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHH
Confidence 4568999999986 7753 2456677788999999999999843333332 7899999999999842 2
Q ss_pred CCCccCCCCccEEEeccC---CCccc----ccccccCCCCCcEEeCcCCccc
Q 008121 146 PYSIASMVSLSYLNVSRN---SLTQS----IGDIFGNLAGLATLDLSFNNFS 190 (577)
Q Consensus 146 p~~~~~l~~L~~L~L~~N---~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 190 (577)
-+.+..-+.|++|+|++| .+... +-..+..=+.|+.|+|+.|.+.
T Consensus 119 a~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 119 LRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 334555567999999876 34432 3344555577888888877654
No 428
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.27 E-value=0.00039 Score=59.58 Aligned_cols=56 Identities=23% Similarity=0.262 Sum_probs=33.0
Q ss_pred EEEeccCCCc-ccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccc
Q 008121 157 YLNVSRNSLT-QSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVT 214 (577)
Q Consensus 157 ~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 214 (577)
.++.+++.|+ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555566654 23443322 35667777777776444445666777777777777654
No 429
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.26 E-value=0.0005 Score=68.00 Aligned_cols=31 Identities=16% Similarity=0.171 Sum_probs=25.9
Q ss_pred CCeeecCCCCCCeeeCCCCCeEEeccccCccc
Q 008121 534 PSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (577)
Q Consensus 534 ~~ivHrDlk~~NILl~~~~~~kl~DFGla~~~ 565 (577)
+.++|+|+.+.||+ .+++.+.++||..+..-
T Consensus 173 ~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 173 LAACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp CEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred ceeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 35899999999999 56667899999988753
No 430
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.25 E-value=0.00051 Score=68.52 Aligned_cols=144 Identities=13% Similarity=0.113 Sum_probs=77.7
Q ss_pred ceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCc--eeeEeeE------EEeCCeEEEEE
Q 008121 416 FLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN--IVTLAGY------CAEHGQRLLVY 487 (577)
Q Consensus 416 ~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~~~------~~~~~~~~lv~ 487 (577)
+.|+.|....+|+....+| .+++|...... ..+++..|..++..+.... +.+++.. ....+..+++|
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~----~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~ 102 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRV----EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALI 102 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEE
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCC----CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEE
Confidence 4577788889999987666 57788876421 1123444555555443111 2233321 12345678999
Q ss_pred EecCCCCHHH--------------hhhhcc-CCC-------CCCCHHHHHH------------HHHHHHHHHHHHhcC--
Q 008121 488 EYVGNGNLHD--------------MLHFAD-DSS-------KNLTWNARVR------------VALGTARALEYLHEV-- 531 (577)
Q Consensus 488 e~~~~g~L~~--------------~l~~~~-~~~-------~~l~~~~~~~------------i~~~i~~~L~yLH~~-- 531 (577)
+|++|..+.. .+|... ... ....|..... +...+.+.+++++..
T Consensus 103 ~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~ 182 (322)
T 2ppq_A 103 SFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWP 182 (322)
T ss_dssp ECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCC
T ss_pred EeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCc
Confidence 9999864321 122110 000 0012322111 011244455666532
Q ss_pred --CCCCeeecCCCCCCeeeCCCCCeEEeccccCcc
Q 008121 532 --CLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (577)
Q Consensus 532 --~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~ 564 (577)
..+.++|+|+.+.|||++++..+.|+||+.+..
T Consensus 183 ~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 183 KDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp CSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred ccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 124699999999999999876668999988764
No 431
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.21 E-value=0.00071 Score=67.89 Aligned_cols=32 Identities=31% Similarity=0.314 Sum_probs=27.7
Q ss_pred CCeeecCCCCCCeeeCCC----CCeEEeccccCccc
Q 008121 534 PSVVHRNFKSANILLDDE----LNPHLSDCGLAALT 565 (577)
Q Consensus 534 ~~ivHrDlk~~NILl~~~----~~~kl~DFGla~~~ 565 (577)
+.++|+|+.+.|||++.+ ..+.|+||+.+..-
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 479999999999999874 67899999988753
No 432
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.15 E-value=8.3e-05 Score=67.02 Aligned_cols=38 Identities=16% Similarity=0.079 Sum_probs=26.4
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEccCCC-cC
Q 008121 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNS-IH 120 (577)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~-l~ 120 (577)
-+++.|||+++.++..--..+..+++|++|+|+++. |+
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~It 99 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIE 99 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCC
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccC
Confidence 368888888887765444456677777777777774 55
No 433
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.12 E-value=0.0019 Score=66.53 Aligned_cols=142 Identities=14% Similarity=0.138 Sum_probs=100.7
Q ss_pred cEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCCC--CCCccEEEccCCcCCCcCCCCccCCCCccEEEec
Q 008121 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQL--PPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (577)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (577)
.++.+.+... ++..-...+..+..|+.+.+..|... .....+ ...|+.+.+..+.+. ...|..+.+|+.+.+.
T Consensus 231 ~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~ 305 (394)
T 4fs7_A 231 GVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLL 305 (394)
T ss_dssp CCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEEC
T ss_pred CCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccc
Confidence 5666766543 44344567888999999999887654 112222 277888888776533 3567888999999997
Q ss_pred cCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCccccccc-ccCCCC-CccEEEeecC
Q 008121 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSL-NVFSGL-PLTTLNVANN 233 (577)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~-~L~~L~l~~N 233 (577)
+| ++.+-..+|.++.+|+.++|.++ ++-.-..+|.+|.+|+.+.+..| ++... .+|.+. .|+.+++..|
T Consensus 306 ~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 306 DS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred cc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 65 66566678999999999999755 66444567889999999999877 55433 356664 4899988765
No 434
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.11 E-value=0.0013 Score=67.75 Aligned_cols=123 Identities=15% Similarity=0.200 Sum_probs=84.5
Q ss_pred cEEEEEcCCCCCcccccccccCCCCCCEEEccCCCcCCcCCCC-CC--CCccEEEccCCcCCCcCCCCccCCCCccEEEe
Q 008121 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQ-LP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (577)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 160 (577)
.++.+.+.++-. ..-...|.+++.|+.+++. +.++ .++.. |. .+|+.++|..| ++..-..+|.++.+|+.+.|
T Consensus 266 ~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 266 YLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAI 341 (394)
T ss_dssp SCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred cccEEecccccc-eecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEE
Confidence 355566654432 2445678899999999996 4555 35433 32 79999999865 66566789999999999999
Q ss_pred ccCCCcccccccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCcccc
Q 008121 161 SRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVT 214 (577)
Q Consensus 161 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 214 (577)
..+ ++.+-..+|.++++|+.+++.+|.... ..+..+.+|+.+.+..|.+.
T Consensus 342 p~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 342 PSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp CTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC-----------
T ss_pred Ccc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCEE
Confidence 755 776667889999999999999987652 46778889999998877653
No 435
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.05 E-value=0.0054 Score=61.10 Aligned_cols=143 Identities=16% Similarity=0.187 Sum_probs=79.6
Q ss_pred ceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCC--ceeeEeeE-----EEeCCeEEEEEE
Q 008121 416 FLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHP--NIVTLAGY-----CAEHGQRLLVYE 488 (577)
Q Consensus 416 ~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~--niv~l~~~-----~~~~~~~~lv~e 488 (577)
..++ |....||+....+|+.+++|....... ....+..|..++..+... .+++++.. ....+..+++||
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~---~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~ 107 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERW---TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFP 107 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTS---CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCC---CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEE
Confidence 4566 788899998777787899999863322 223455566666555321 23444432 223556789999
Q ss_pred ecCCCCHH-----H---------hhhhccC-----CCCCCCHHHH----HHH---------------HHHHHHHHHHHhc
Q 008121 489 YVGNGNLH-----D---------MLHFADD-----SSKNLTWNAR----VRV---------------ALGTARALEYLHE 530 (577)
Q Consensus 489 ~~~~g~L~-----~---------~l~~~~~-----~~~~l~~~~~----~~i---------------~~~i~~~L~yLH~ 530 (577)
|++|..+. . .+|.... ....+++... ..+ ...+.+.++.+..
T Consensus 108 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (328)
T 1zyl_A 108 SVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTA 187 (328)
T ss_dssp CCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 99875432 1 0121100 0112222211 001 1111122333322
Q ss_pred C----CCCCeeecCCCCCCeeeCCCCCeEEeccccCcc
Q 008121 531 V----CLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (577)
Q Consensus 531 ~----~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~ 564 (577)
. ..+.++|+|+++.|||++ + .+.|+||+.+..
T Consensus 188 ~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 188 HWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1 223689999999999999 4 899999988764
No 436
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.01 E-value=0.0026 Score=64.90 Aligned_cols=129 Identities=15% Similarity=0.187 Sum_probs=85.5
Q ss_pred cccccccCCCCCCEEEccCCCcCCcCCC-CC--CCCccEEEccCCcCCCcCCCCccCCCCccEEEeccCCCccccccccc
Q 008121 98 TMGYLLSDLLSLRKFDLSGNSIHDTIPY-QL--PPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFG 174 (577)
Q Consensus 98 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 174 (577)
.....+....+|+.+.+..+ +. .++. .+ ...|+.+.+..+ ++..-...|.++.+|+.+.+..+ +.......|.
T Consensus 208 i~~~~f~~~~~l~~i~~~~~-~~-~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~ 283 (379)
T 4h09_A 208 VTAYGFSYGKNLKKITITSG-VT-TLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCS 283 (379)
T ss_dssp ECTTTTTTCSSCSEEECCTT-CC-EECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTT
T ss_pred Eeecccccccccceeeeccc-ee-EEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccc
Confidence 33456777788888887655 22 2222 22 267888888765 55455667788888888888644 5555556788
Q ss_pred CCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccCccccccc-ccCCCC-CccEEEee
Q 008121 175 NLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSL-NVFSGL-PLTTLNVA 231 (577)
Q Consensus 175 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~-~L~~L~l~ 231 (577)
++++|+.+.+.+|.++..-...|.+|.+|+.+.|..+ ++..- .+|... .|+.+.+.
T Consensus 284 ~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 284 GCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp TCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred cccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 8888888888888887545567888888888888654 44332 245543 36666554
No 437
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.97 E-value=0.007 Score=62.16 Aligned_cols=143 Identities=11% Similarity=0.044 Sum_probs=87.0
Q ss_pred ccccCCCCCCEEEccCCCcCCcCCCC---CCCCccEEEccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCC
Q 008121 101 YLLSDLLSLRKFDLSGNSIHDTIPYQ---LPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLA 177 (577)
Q Consensus 101 ~~~~~l~~L~~L~Ls~N~l~~~~p~~---~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 177 (577)
.......+|+.+.+..+- + .+... -...|+.+.+..+... .....|..+..|+.+.+..+.+. ...|.++.
T Consensus 224 ~~~~~~~~l~~i~ip~~~-~-~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~ 297 (394)
T 4fs7_A 224 DFALSKTGVKNIIIPDSF-T-ELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCS 297 (394)
T ss_dssp TTTTTTCCCCEEEECTTC-C-EECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCT
T ss_pred hhhcccCCCceEEECCCc-e-ecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccc
Confidence 334455677777775432 2 12211 1267888888776544 55667778888888877765432 34577788
Q ss_pred CCcEEeCcCCcccCCCCCCccCCCCCCeEEccCccccccc-ccCCCC-CccEEEeecCccccccCcccc---cccceeec
Q 008121 178 GLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSL-NVFSGL-PLTTLNVANNHFSGWIPRELI---SIRTFIYD 252 (577)
Q Consensus 178 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~-~L~~L~l~~N~l~g~~p~~l~---~l~~l~~~ 252 (577)
+|+.+.+.+| ++..-...|.++.+|+.++|.++ ++..- .+|.+. .|+.+++..| ++-.-...|. +|+.+.+.
T Consensus 298 ~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 298 SLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELP 374 (394)
T ss_dssp TCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEE
T ss_pred cccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEEC
Confidence 8888888765 55344556888888888888654 54432 345554 4888888766 5522223343 34444443
No 438
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.92 E-value=0.0015 Score=68.11 Aligned_cols=72 Identities=13% Similarity=0.128 Sum_probs=47.5
Q ss_pred cceeccCccceEEEEEEcC--------CcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCce-eeEeeEEEeCCeEEE
Q 008121 415 EFLIGEGSLGRVYRAEFAN--------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNI-VTLAGYCAEHGQRLL 485 (577)
Q Consensus 415 ~~~lg~G~fg~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~l 485 (577)
.+.|+.|....+|++...+ ++.+++|+..... ..+.+.+|..++..+...++ .++++.+.. .+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~----~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~ 149 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE----TESHLVAESVIFTLLSERHLGPKLYGIFSG----GR 149 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC----CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC----cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CE
Confidence 4568888889999998753 4788888874311 11345578887777643333 566665532 38
Q ss_pred EEEecCCCC
Q 008121 486 VYEYVGNGN 494 (577)
Q Consensus 486 v~e~~~~g~ 494 (577)
|+||++|..
T Consensus 150 v~e~l~G~~ 158 (429)
T 1nw1_A 150 LEEYIPSRP 158 (429)
T ss_dssp EECCCCEEE
T ss_pred EEEEeCCcc
Confidence 999998633
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.76 E-value=0.0028 Score=64.77 Aligned_cols=142 Identities=16% Similarity=0.172 Sum_probs=81.0
Q ss_pred ceeccCccceEEEEEEcC--------CcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCc-eeeEeeEEEeCCeEEEE
Q 008121 416 FLIGEGSLGRVYRAEFAN--------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN-IVTLAGYCAEHGQRLLV 486 (577)
Q Consensus 416 ~~lg~G~fg~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~n-iv~l~~~~~~~~~~~lv 486 (577)
+.+..|-...+|++...+ ++.+++|+.... ......+.+|.++++.+.-.+ ..++++++.. .+|
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~---~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v 128 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI---LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRL 128 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc---cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccE
Confidence 457778888999998742 478888886321 112345568888887764222 3456665543 299
Q ss_pred EEecCCCCHHH--------------h---hhhccC-CCCCC--CHHHHHHHHHHHHH-------------------HHHH
Q 008121 487 YEYVGNGNLHD--------------M---LHFADD-SSKNL--TWNARVRVALGTAR-------------------ALEY 527 (577)
Q Consensus 487 ~e~~~~g~L~~--------------~---l~~~~~-~~~~l--~~~~~~~i~~~i~~-------------------~L~y 527 (577)
|||++|..|.. . ||...- ..+.. -|.+..++..++.. .+++
T Consensus 129 ~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (379)
T 3feg_A 129 EQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGN 208 (379)
T ss_dssp EECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHH
T ss_pred EEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHH
Confidence 99998754421 1 121110 11122 24444445444321 2333
Q ss_pred Hh----cC-CCCCeeecCCCCCCeeeCCC----CCeEEeccccCcc
Q 008121 528 LH----EV-CLPSVVHRNFKSANILLDDE----LNPHLSDCGLAAL 564 (577)
Q Consensus 528 LH----~~-~~~~ivHrDlk~~NILl~~~----~~~kl~DFGla~~ 564 (577)
|. .. ....++|+|+.+.|||++.+ +.+.++||..|..
T Consensus 209 L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 209 LRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 32 21 12368999999999999876 7899999998874
No 440
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.53 E-value=0.013 Score=59.56 Aligned_cols=131 Identities=14% Similarity=0.145 Sum_probs=85.3
Q ss_pred cccCCCCCCEEEccCCCcC-CcCCCCCCCCccEEEccCCcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCc
Q 008121 102 LLSDLLSLRKFDLSGNSIH-DTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLA 180 (577)
Q Consensus 102 ~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 180 (577)
.+.....+..+.+..+.-. +........+|+.+.+..+ +...-...|.++.+|+.+.+..+ ++..-...|.++.+|+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~ 266 (379)
T 4h09_A 189 SYPAAKTGTEFTIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALK 266 (379)
T ss_dssp ECCTTCCCSEEECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCC
T ss_pred cccccccccccccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhc
Confidence 4445555666655443322 1111122267888888655 44455667788888988888765 6656667788888898
Q ss_pred EEeCcCCcccCCCCCCccCCCCCCeEEccCcccccccc-cCCCC-CccEEEeecCccc
Q 008121 181 TLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSGL-PLTTLNVANNHFS 236 (577)
Q Consensus 181 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~-~L~~L~l~~N~l~ 236 (577)
.+.+..+ ++..-...|.+|.+|+.+.+.+|.++.... +|... .|+.++|..+ ++
T Consensus 267 ~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~ 322 (379)
T 4h09_A 267 TLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK 322 (379)
T ss_dssp EEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC
T ss_pred ccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc
Confidence 8888654 553444568888899999988888776543 46554 4888888654 44
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.42 E-value=0.011 Score=61.99 Aligned_cols=74 Identities=11% Similarity=0.007 Sum_probs=45.6
Q ss_pred cceeccCccceEEEEEEcC-CcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCce-eeEeeEEEeCCeEEEEEEecCC
Q 008121 415 EFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNI-VTLAGYCAEHGQRLLVYEYVGN 492 (577)
Q Consensus 415 ~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~e~~~~ 492 (577)
.+.|+.|-...+|+....+ +..+++|+........ -+-.+|..++..+...++ .++++++. + .+||||++|
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~---idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G 185 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI---INREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDG 185 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC---SCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCS
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh---cCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCC
Confidence 4568888889999998865 4778888764321110 011467777777764444 46777662 2 259999987
Q ss_pred CCH
Q 008121 493 GNL 495 (577)
Q Consensus 493 g~L 495 (577)
..|
T Consensus 186 ~~l 188 (458)
T 2qg7_A 186 YAL 188 (458)
T ss_dssp EEC
T ss_pred ccC
Confidence 443
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.27 E-value=0.012 Score=59.80 Aligned_cols=72 Identities=8% Similarity=0.028 Sum_probs=40.3
Q ss_pred ceeccCccceEEEEEEcC---------CcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCc-eeeEeeEEEeCCeEEE
Q 008121 416 FLIGEGSLGRVYRAEFAN---------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN-IVTLAGYCAEHGQRLL 485 (577)
Q Consensus 416 ~~lg~G~fg~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~n-iv~l~~~~~~~~~~~l 485 (577)
+.++.|....+|+....+ +..+++|+..... ....+...|.+++..+...+ +.++++.. . -++
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~---~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~ 111 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV---DELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGR 111 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG---GGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc---cceecHHHHHHHHHHHHhcCCCCceEEec--C--CcE
Confidence 457788888999998754 2678888765321 11111245666666554223 34565543 2 268
Q ss_pred EEEecCCCC
Q 008121 486 VYEYVGNGN 494 (577)
Q Consensus 486 v~e~~~~g~ 494 (577)
||||++|..
T Consensus 112 v~e~i~G~~ 120 (369)
T 3c5i_A 112 IEEWLYGDP 120 (369)
T ss_dssp EEECCCSEE
T ss_pred EEEEecCCc
Confidence 999998754
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.27 E-value=0.015 Score=58.40 Aligned_cols=31 Identities=19% Similarity=0.285 Sum_probs=27.8
Q ss_pred CCeeecCCCCCCeeeCCCCCeEEeccccCcc
Q 008121 534 PSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (577)
Q Consensus 534 ~~ivHrDlk~~NILl~~~~~~kl~DFGla~~ 564 (577)
+.++|+|+.+.||++++++.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4799999999999999888899999987764
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.44 E-value=0.031 Score=57.26 Aligned_cols=145 Identities=13% Similarity=0.138 Sum_probs=80.4
Q ss_pred ceeccCccceEEEEEEcC--------CcEEEEEEccccccc----------hHH------HHHHHHHHHHhhcCCCCc-e
Q 008121 416 FLIGEGSLGRVYRAEFAN--------GKIMAVKKIDNAALS----------LQE------EDNFLEAVSNMSRLRHPN-I 470 (577)
Q Consensus 416 ~~lg~G~fg~Vy~~~~~~--------~~~vavK~~~~~~~~----------~~~------~~~~~~e~~~l~~l~H~n-i 470 (577)
+.|..|-...+|++...+ .+.|.+++.-..... ... .+....|..+++.+...+ .
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456678888999987754 367777775332100 000 112335777777775333 4
Q ss_pred eeEeeEEEeCCeEEEEEEecCCCCHHH--h---------------hhhcc-CCCCCCC--HHHHHHHHHHHH--------
Q 008121 471 VTLAGYCAEHGQRLLVYEYVGNGNLHD--M---------------LHFAD-DSSKNLT--WNARVRVALGTA-------- 522 (577)
Q Consensus 471 v~l~~~~~~~~~~~lv~e~~~~g~L~~--~---------------l~~~~-~~~~~l~--~~~~~~i~~~i~-------- 522 (577)
.++++++.. .+|+||+++-.|.. + +|... ...+... |....++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 467766542 28999998644321 1 11111 0112222 233333333221
Q ss_pred --------------HHHH----HHhcC-CCCCeeecCCCCCCeeeCCC------CCeEEeccccCcc
Q 008121 523 --------------RALE----YLHEV-CLPSVVHRNFKSANILLDDE------LNPHLSDCGLAAL 564 (577)
Q Consensus 523 --------------~~L~----yLH~~-~~~~ivHrDlk~~NILl~~~------~~~kl~DFGla~~ 564 (577)
+-+. +|... ....++|+|+.+.|||++++ +.+.++||..|..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 1122 23222 22368999999999999876 7899999988874
No 445
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=94.56 E-value=0.026 Score=36.27 Aligned_cols=31 Identities=35% Similarity=0.524 Sum_probs=20.2
Q ss_pred CCCCCceeehhHHHHHHHHHHHHHHHHHHHh
Q 008121 298 KELPAGAIVGIVLGAVFLVALALLALYFCIR 328 (577)
Q Consensus 298 ~~~~~~~iv~iv~~~~~lv~~~~~~~~~~~~ 328 (577)
+.++.+.|.+++++.++.++++..+.++++|
T Consensus 6 ~~ls~GaIAGiVvG~v~gv~li~~l~~~~~r 36 (38)
T 2k1k_A 6 RGLTGGEIVAVIFGLLLGAALLLGILVFRSR 36 (38)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCceeeeehHHHHHHHHHHHHHHHHee
Confidence 3456778888888887766665555454443
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.43 E-value=0.12 Score=53.33 Aligned_cols=142 Identities=12% Similarity=0.115 Sum_probs=80.4
Q ss_pred cceeccCccceEEEEEEcC--------CcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCc-eeeEeeEEEeCCeEEE
Q 008121 415 EFLIGEGSLGRVYRAEFAN--------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN-IVTLAGYCAEHGQRLL 485 (577)
Q Consensus 415 ~~~lg~G~fg~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~n-iv~l~~~~~~~~~~~l 485 (577)
.+.+..|-...+|+....+ ++.+++|+..... ...-+..+|.++++.+.-.+ ..++++.+ . -++
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t---~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~ 147 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV---GKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGR 147 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC----CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc---chhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCE
Confidence 3467778889999998763 5788888864321 11111235666666553222 34555433 2 278
Q ss_pred EEEecCCCCHHH--------------h---hhhccC---------CCCCCCHHHHHHHHHHH------------------
Q 008121 486 VYEYVGNGNLHD--------------M---LHFADD---------SSKNLTWNARVRVALGT------------------ 521 (577)
Q Consensus 486 v~e~~~~g~L~~--------------~---l~~~~~---------~~~~l~~~~~~~i~~~i------------------ 521 (577)
||||++|..|.. . +|...- ...+-.|.+..++..++
T Consensus 148 I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 227 (424)
T 3mes_A 148 IEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSK 227 (424)
T ss_dssp EEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHH
T ss_pred EEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHH
Confidence 999999865321 0 111100 11111244333333222
Q ss_pred -HHHHHHHhc---------------------CCCCCeeecCCCCCCeeeCCCCCeEEeccccCcc
Q 008121 522 -ARALEYLHE---------------------VCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (577)
Q Consensus 522 -~~~L~yLH~---------------------~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~~ 564 (577)
...+++|.. .....++|+|+.+.||+ +.++.+.++||..|..
T Consensus 228 l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 228 ILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 223333321 11235899999999999 8888999999998874
No 447
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=93.04 E-value=0.14 Score=33.91 Aligned_cols=27 Identities=22% Similarity=0.437 Sum_probs=11.1
Q ss_pred eehhHHHHHHHHHHHHHHHHHHHhhcc
Q 008121 305 IVGIVLGAVFLVALALLALYFCIRKNR 331 (577)
Q Consensus 305 iv~iv~~~~~lv~~~~~~~~~~~~rrr 331 (577)
|++.+++.+++++++++.++++.|||+
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRH 39 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhH
Confidence 444444444433333333344444333
No 448
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=92.91 E-value=0.16 Score=33.55 Aligned_cols=27 Identities=22% Similarity=0.488 Sum_probs=11.4
Q ss_pred eeehhHHHHHHHHHHHHHHHHHHHhhc
Q 008121 304 AIVGIVLGAVFLVALALLALYFCIRKN 330 (577)
Q Consensus 304 ~iv~iv~~~~~lv~~~~~~~~~~~~rr 330 (577)
.|++.+++.+++++++++.++++.|||
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RRR 37 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRRK 37 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhh
Confidence 344445544444333333333444433
No 449
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.96 E-value=0.53 Score=48.14 Aligned_cols=29 Identities=24% Similarity=0.384 Sum_probs=25.1
Q ss_pred eeecCCCCCCeee------CCCCCeEEeccccCcc
Q 008121 536 VVHRNFKSANILL------DDELNPHLSDCGLAAL 564 (577)
Q Consensus 536 ivHrDlk~~NILl------~~~~~~kl~DFGla~~ 564 (577)
++|+|+.+.|||+ +++..++++||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567899999998874
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=90.33 E-value=0.033 Score=58.37 Aligned_cols=61 Identities=7% Similarity=0.029 Sum_probs=17.2
Q ss_pred cceeccCccceEEEEEEcC-CcEEEE------EEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeEEE
Q 008121 415 EFLIGEGSLGRVYRAEFAN-GKIMAV------KKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCA 478 (577)
Q Consensus 415 ~~~lg~G~fg~Vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~ 478 (577)
.+.+| ||.||+|.+.. ..+||| |+.+....+.+....|.+|..++...+|||+++.+++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 45566 99999998864 367888 777654444455567889999999999999999988764
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=89.38 E-value=0.34 Score=32.00 Aligned_cols=11 Identities=27% Similarity=0.685 Sum_probs=6.0
Q ss_pred eeehhHHHHHH
Q 008121 304 AIVGIVLGAVF 314 (577)
Q Consensus 304 ~iv~iv~~~~~ 314 (577)
.+++.++|+++
T Consensus 13 ~Ia~~vVGvll 23 (44)
T 2jwa_A 13 SIISAVVGILL 23 (44)
T ss_dssp HHHHHHHHHHH
T ss_pred chHHHHHHHHH
Confidence 45666666443
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=88.23 E-value=1.5 Score=40.37 Aligned_cols=91 Identities=14% Similarity=0.151 Sum_probs=65.9
Q ss_pred CCCCceeeEeeEEEeCCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHH-HHhcCCCCCeeecCCCC
Q 008121 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALE-YLHEVCLPSVVHRNFKS 543 (577)
Q Consensus 465 l~H~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~-yLH~~~~~~ivHrDlk~ 543 (577)
-.||++ -...-.+++...+.|+.-+++-=...+ +.++..++++++..++.-.. +++.. +|--+.|
T Consensus 47 ~~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i-------~~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P 112 (219)
T 4ano_A 47 EVDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI-------RKTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCP 112 (219)
T ss_dssp GSCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH-------HTSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCG
T ss_pred ccCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH-------HhcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeC
Confidence 368888 334446677777777765443222233 24678899999999887777 66655 7778999
Q ss_pred CCeeeCCCCCeEEeccccCcccCCCc
Q 008121 544 ANILLDDELNPHLSDCGLAALTPNTE 569 (577)
Q Consensus 544 ~NILl~~~~~~kl~DFGla~~~~~~~ 569 (577)
+||++|.++.+++.-.|+-..+++-+
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~lpP~e 138 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKESLPPDE 138 (219)
T ss_dssp GGEEECTTCCEEESCCEETTTBSSCS
T ss_pred ceEEEeCCCcEEEEEcCCcccCCCCC
Confidence 99999999999999999877665433
No 453
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=86.64 E-value=1.4 Score=40.47 Aligned_cols=91 Identities=13% Similarity=0.105 Sum_probs=66.9
Q ss_pred CCCCceeeEeeEEEeCCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCC
Q 008121 465 LRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSA 544 (577)
Q Consensus 465 l~H~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~ 544 (577)
-.||+++.. .+-..++...+.|+.-+. ...+- .-+.++...+++++..|+.-..+++.. +|--+.|+
T Consensus 42 ~~~~~Fl~~-~I~e~eD~v~~~y~~~~~--~~~f~-----~ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~ 108 (215)
T 4ann_A 42 QHSPYFIDA-ELTELRDSFQIHYDINDN--HTPFD-----NIKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPD 108 (215)
T ss_dssp SCCTTBCCE-EEEECSSEEEEEECCCTT--SEEGG-----GGGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGG
T ss_pred ccCCcccce-EEEEcccEEEEEEEcCcc--cCCHH-----HHHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecc
Confidence 478988876 455666666666665432 22221 123578889999999999888777765 78889999
Q ss_pred CeeeCCCCCeEEeccccCcccCCC
Q 008121 545 NILLDDELNPHLSDCGLAALTPNT 568 (577)
Q Consensus 545 NILl~~~~~~kl~DFGla~~~~~~ 568 (577)
||++|.++.+++.-.|+-..+++.
T Consensus 109 NL~f~~~~~p~i~~RGik~~l~P~ 132 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVVDPL 132 (215)
T ss_dssp GEEECTTSCEEESCCEETTTBSCC
T ss_pred eEEEcCCCCEEEEEccCccCCCCC
Confidence 999999999999999986655544
No 454
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=65.64 E-value=4.1 Score=25.07 Aligned_cols=27 Identities=41% Similarity=0.786 Sum_probs=17.0
Q ss_pred CCCceeehhHHHHHHHHHHHHHHHHHH
Q 008121 300 LPAGAIVGIVLGAVFLVALALLALYFC 326 (577)
Q Consensus 300 ~~~~~iv~iv~~~~~lv~~~~~~~~~~ 326 (577)
+..+.+.|++++.++..+++.+.+|++
T Consensus 4 L~~gaIaGIVvgdi~~t~~i~~~vy~~ 30 (33)
T 2l34_A 4 VSPGVLAGIVVGDLVLTVLIALAVYFL 30 (33)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEeEeHHHHHHHHHHHHHHhhe
Confidence 345667788888776666555555544
No 455
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=57.14 E-value=17 Score=24.97 Aligned_cols=27 Identities=26% Similarity=0.314 Sum_probs=13.4
Q ss_pred CCceeehhHHHHHHHHHHHHHHHHHHH
Q 008121 301 PAGAIVGIVLGAVFLVALALLALYFCI 327 (577)
Q Consensus 301 ~~~~iv~iv~~~~~lv~~~~~~~~~~~ 327 (577)
+..+|+..+++.+++.++++.++|-+-
T Consensus 8 p~WiIi~svl~GLLLL~Lii~~LwK~G 34 (54)
T 2l8s_A 8 PLWVILLSAFAGLLLLMLLILALWKIG 34 (54)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 344555555555555555544455443
No 456
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=56.50 E-value=19 Score=25.72 Aligned_cols=7 Identities=71% Similarity=0.933 Sum_probs=2.9
Q ss_pred hHHHHHH
Q 008121 308 IVLGAVF 314 (577)
Q Consensus 308 iv~~~~~ 314 (577)
+++|+++
T Consensus 12 ivlGg~~ 18 (70)
T 2klu_A 12 IVLGGVA 18 (70)
T ss_dssp HHHHHHH
T ss_pred HHHhHHH
Confidence 4444433
No 457
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=50.88 E-value=27 Score=24.04 Aligned_cols=28 Identities=25% Similarity=0.390 Sum_probs=13.6
Q ss_pred CCCceeehhHHHHHHHHHHHHHHHHHHH
Q 008121 300 LPAGAIVGIVLGAVFLVALALLALYFCI 327 (577)
Q Consensus 300 ~~~~~iv~iv~~~~~lv~~~~~~~~~~~ 327 (577)
.+..+|+..+++.++++++++.++|-|-
T Consensus 10 vp~wiIi~svl~GLllL~li~~~LwK~G 37 (54)
T 2knc_A 10 IPIWWVLVGVLGGLLLLTILVLAMWKVG 37 (54)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3444555555555555554444444433
No 458
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=47.72 E-value=8.9 Score=27.41 Aligned_cols=17 Identities=24% Similarity=0.598 Sum_probs=10.4
Q ss_pred eeehhHHHHHHHHHHHH
Q 008121 304 AIVGIVLGAVFLVALAL 320 (577)
Q Consensus 304 ~iv~iv~~~~~lv~~~~ 320 (577)
+++|.+++.+++.++.+
T Consensus 12 ivlGg~~~lll~~glcI 28 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGI 28 (70)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHH
Confidence 46677777666555443
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=46.81 E-value=53 Score=25.69 Aligned_cols=39 Identities=13% Similarity=0.171 Sum_probs=16.8
Q ss_pred ccccCCCCCcEEeCcCCcccCCCCCCccCCCCCCeEEccC
Q 008121 171 DIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQN 210 (577)
Q Consensus 171 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 210 (577)
..|.++++|+.+.|-.+ ++..-...|.+|.+|+.+.+..
T Consensus 14 ~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 14 SLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred HHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33444444444444433 2212233455555555555543
No 460
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=44.80 E-value=2.3e+02 Score=30.07 Aligned_cols=46 Identities=17% Similarity=0.101 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHH--HHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeccccCc
Q 008121 511 WNARVRVALGTA--RALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (577)
Q Consensus 511 ~~~~~~i~~~i~--~~L~yLH~~~~~~ivHrDlk~~NILl~~~~~~kl~DFGla~ 563 (577)
|..+..+++..| .-+.|+=. | +|=.++|||+|.+|++-=+|||..-
T Consensus 454 ~~a~~nF~~S~A~ySvv~YILG-----i--gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYILG-----V--GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-----C--CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheeee-----c--cCCCCcceeEcCCCCEeeeehHHhh
Confidence 455555555543 23555543 3 5888999999999999999999864
No 461
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=38.28 E-value=26 Score=22.76 Aligned_cols=24 Identities=29% Similarity=0.524 Sum_probs=11.1
Q ss_pred CCceeehhHHHHHHHHHHHHHHHH
Q 008121 301 PAGAIVGIVLGAVFLVALALLALY 324 (577)
Q Consensus 301 ~~~~iv~iv~~~~~lv~~~~~~~~ 324 (577)
+..+++..+++.+++.+++..++|
T Consensus 9 p~wiIi~s~l~GLllL~li~~~Lw 32 (42)
T 2k1a_A 9 PIWWVLVGVLGGLLLLTILVLAMW 32 (42)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444444
No 462
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=36.00 E-value=45 Score=26.14 Aligned_cols=48 Identities=17% Similarity=0.128 Sum_probs=34.0
Q ss_pred CcCCCcCCCCccCCCCccEEEeccCCCcccccccccCCCCCcEEeCcCC
Q 008121 139 NNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFN 187 (577)
Q Consensus 139 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 187 (577)
..++.+-...|.++.+|+.+.|-.+ ++.+-..+|.++.+|+.+.+...
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 3455555677888888888888654 55455667888888888887654
No 463
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=31.61 E-value=3e+02 Score=26.83 Aligned_cols=138 Identities=16% Similarity=0.152 Sum_probs=69.5
Q ss_pred ceeccCccceEEEEEEcCCcEEEEEEccccccchHHHHHHHHHHHHhhcCCCCceeeEeeE-------------------
Q 008121 416 FLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY------------------- 476 (577)
Q Consensus 416 ~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~------------------- 476 (577)
+..-.|. +-||.+.. ++..|+||-.. ....+.|..++...-.+.-|+.--+.-.
T Consensus 75 ~~s~~Gs-tgvff~~t-d~~~~VVK~s~-----~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~ 147 (342)
T 1cja_A 75 ERSEKGT-EGLFFVET-ESGVFIVKRST-----NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFR 147 (342)
T ss_dssp EECCSTT-SCEEEEEE-SSCEEEEECCT-----THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSC
T ss_pred EeccCCC-CCeEEEEe-CCCEEEEeCcH-----HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhH
Confidence 3344454 55666655 57788889542 1233344444444444555542211100
Q ss_pred ---EEeCCeEEEEEEecCCCCHHHhhhhccCCCCCCCHHHHHHHHHHH--HHHHHHHhcCCC--CCeeecCCCCCCeeeC
Q 008121 477 ---CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGT--ARALEYLHEVCL--PSVVHRNFKSANILLD 549 (577)
Q Consensus 477 ---~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i--~~~L~yLH~~~~--~~ivHrDlk~~NILl~ 549 (577)
.......+++|||++|..|.+.-+.. ....+... ...++ .-+++++..+.. |-+-+.--.++|||++
T Consensus 148 ~l~~l~~~~~~l~meyv~G~~L~e~~~~~--~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~ 221 (342)
T 1cja_A 148 VITTLANQANILLMELVRGITLNKLTTTS--APEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLS 221 (342)
T ss_dssp HHHHHTTCSEEEEEECCCEEESTTCCSSS--HHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEE
T ss_pred HHHHhhcccceehhhhcCCCccccchhhh--hhhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEe
Confidence 00122466999999875544321100 00112222 22222 335666665432 2122223578899998
Q ss_pred CCC-CeEEeccccCcccC
Q 008121 550 DEL-NPHLSDCGLAALTP 566 (577)
Q Consensus 550 ~~~-~~kl~DFGla~~~~ 566 (577)
++. .+.++|-+.+..-+
T Consensus 222 ~~n~~~~~IDhn~af~~~ 239 (342)
T 1cja_A 222 ERGATVVPIDSKIIPLDA 239 (342)
T ss_dssp SBTTCEEECSCCCCCCCS
T ss_pred CCCCeEEEEcCCccccCC
Confidence 755 48999999997644
No 464
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=29.14 E-value=40 Score=24.15 Aligned_cols=20 Identities=30% Similarity=0.517 Sum_probs=9.5
Q ss_pred eehhHHHHHHHHHHHHHHHH
Q 008121 305 IVGIVLGAVFLVALALLALY 324 (577)
Q Consensus 305 iv~iv~~~~~lv~~~~~~~~ 324 (577)
+.|.+++++++++.+++++.
T Consensus 19 igGLifA~vLfi~GI~iilS 38 (67)
T 2jp3_A 19 LGGLIFGGLLCIAGIALALS 38 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred ecchhhHHHHHHHHHHHHHc
Confidence 44555555544444444443
No 465
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=26.33 E-value=3.4e+02 Score=31.00 Aligned_cols=25 Identities=20% Similarity=0.218 Sum_probs=22.7
Q ss_pred cCCCCCCeeeCCCCCeEEeccccCc
Q 008121 539 RNFKSANILLDDELNPHLSDCGLAA 563 (577)
Q Consensus 539 rDlk~~NILl~~~~~~kl~DFGla~ 563 (577)
+|=.++|||+|.+|.+-=+|||.+-
T Consensus 937 gDRH~~NILid~tG~v~HIDFG~~f 961 (1091)
T 3hhm_A 937 GDRHNSNIMVKDDGQLFHIDFGHFL 961 (1091)
T ss_dssp CCCCTTTEEEETTSCEEECCCCCCS
T ss_pred cCCCCcceEEeCCCCEEEEeehhhh
Confidence 6888999999999999999999873
No 466
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=22.53 E-value=1e+02 Score=22.25 Aligned_cols=20 Identities=25% Similarity=0.502 Sum_probs=9.5
Q ss_pred eehhHHHHHHHHHHHHHHHH
Q 008121 305 IVGIVLGAVFLVALALLALY 324 (577)
Q Consensus 305 iv~iv~~~~~lv~~~~~~~~ 324 (577)
+.|.+++++++++.+++++.
T Consensus 18 iGGLifA~vLfi~GI~iilS 37 (72)
T 2jo1_A 18 IGGLVIAGILFILGILIVLS 37 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHc
Confidence 44555555544444444443
No 467
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=21.37 E-value=71 Score=23.91 Aligned_cols=16 Identities=38% Similarity=0.663 Sum_probs=6.0
Q ss_pred eehhHHHHHHHHHHHH
Q 008121 305 IVGIVLGAVFLVALAL 320 (577)
Q Consensus 305 iv~iv~~~~~lv~~~~ 320 (577)
|++.++++++++++++
T Consensus 13 Iv~gvi~gilliGlll 28 (79)
T 2knc_B 13 VLLSVMGAILLIGLAA 28 (79)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH
Confidence 3333333334333333
No 468
>1afo_A Glycophorin A; integral membrane protein, transmembrane helix interactions, membrane protein folding; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 2kpf_A
Probab=21.24 E-value=1e+02 Score=19.46 Aligned_cols=26 Identities=27% Similarity=0.387 Sum_probs=11.5
Q ss_pred eeehhHHHHHHHHHHHHHHHHHHHhh
Q 008121 304 AIVGIVLGAVFLVALALLALYFCIRK 329 (577)
Q Consensus 304 ~iv~iv~~~~~lv~~~~~~~~~~~~r 329 (577)
.++.++.+..+.+....++..++.+|
T Consensus 11 ~i~lII~~vmaGiIG~IllI~y~I~r 36 (40)
T 1afo_A 11 EITLIIFGVMAGVIGTILLISYGIRR 36 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555544443333333344443
Done!