Query 008122
Match_columns 577
No_of_seqs 177 out of 985
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 18:38:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008122.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008122hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hcu_A Alpha-1,2-mannosidase; 100.0 6E-141 2E-145 1154.8 29.3 433 35-483 10-494 (503)
2 2ri9_A Mannosyl-oligosaccharid 100.0 2E-140 7E-145 1144.6 31.8 428 38-482 3-474 (475)
3 1dl2_A Class I alpha-1,2-manno 100.0 1E-140 3E-145 1154.2 26.2 439 38-499 3-510 (511)
4 1nxc_A Mannosyl-oligosaccharid 100.0 9E-140 3E-144 1139.7 33.1 427 33-484 13-468 (478)
5 1x9d_A Endoplasmic reticulum m 100.0 5E-139 2E-143 1142.9 32.5 419 37-483 85-536 (538)
6 3k7x_A LIN0763 protein; Q92DQ0 97.4 0.0016 5.4E-08 68.1 14.7 220 142-455 51-281 (349)
7 2gz6_A N-acetyl-D-glucosamine 97.3 0.0049 1.7E-07 64.0 16.4 154 138-311 54-209 (388)
8 3gt5_A N-acetylglucosamine 2-e 97.2 0.011 3.7E-07 62.4 17.3 249 139-460 54-323 (402)
9 3gt5_A N-acetylglucosamine 2-e 97.1 0.0043 1.5E-07 65.5 13.7 216 141-425 117-348 (402)
10 3k7x_A LIN0763 protein; Q92DQ0 97.1 0.00077 2.6E-08 70.5 7.7 141 145-312 100-251 (349)
11 2zzr_A Unsaturated glucuronyl 97.1 0.0056 1.9E-07 65.3 13.9 207 141-425 72-284 (397)
12 2ahf_A Unsaturated glucuronyl 96.9 0.0084 2.9E-07 63.5 13.1 153 140-326 45-204 (377)
13 2zbl_A Putative isomerase; N-a 96.8 0.022 7.7E-07 60.4 15.8 258 98-425 56-354 (421)
14 2gz6_A N-acetyl-D-glucosamine 96.8 0.0065 2.2E-07 63.1 11.2 157 139-312 174-342 (388)
15 1nc5_A Hypothetical protein YT 96.6 0.055 1.9E-06 56.6 16.8 167 105-311 8-180 (373)
16 1nc5_A Hypothetical protein YT 96.5 0.0075 2.6E-07 63.2 9.6 181 107-310 56-254 (373)
17 2zzr_A Unsaturated glucuronyl 96.3 0.02 6.9E-07 61.0 11.4 152 141-310 118-282 (397)
18 3pmm_A Putative cytoplasmic pr 96.2 0.019 6.7E-07 60.6 11.0 180 109-311 85-277 (382)
19 2ahf_A Unsaturated glucuronyl 96.2 0.027 9.2E-07 59.6 11.6 153 141-310 92-257 (377)
20 2ri9_A Mannosyl-oligosaccharid 95.2 0.099 3.4E-06 56.9 11.5 166 112-293 254-449 (475)
21 1fp3_A N-acyl-D-glucosamine 2- 94.8 0.029 1E-06 58.6 6.0 213 139-425 124-352 (402)
22 1x9d_A Endoplasmic reticulum m 94.8 0.2 7E-06 55.2 12.8 167 111-293 323-514 (538)
23 3pmm_A Putative cytoplasmic pr 94.6 0.16 5.5E-06 53.5 11.1 128 141-311 72-207 (382)
24 1hcu_A Alpha-1,2-mannosidase; 93.5 0.24 8.4E-06 54.2 9.9 165 112-293 267-468 (503)
25 3k11_A Putative glycosyl hydro 93.0 0.11 3.8E-06 56.1 6.3 149 140-311 148-308 (445)
26 1fp3_A N-acyl-D-glucosamine 2- 92.4 4.6 0.00016 41.8 17.5 138 165-311 11-159 (402)
27 1nxc_A Mannosyl-oligosaccharid 92.2 1.5 5E-05 47.8 13.7 168 111-293 259-446 (478)
28 2zbl_A Putative isomerase; N-a 92.1 0.88 3E-05 48.1 11.6 162 143-320 178-365 (421)
29 1dl2_A Class I alpha-1,2-manno 89.1 1.9 6.5E-05 47.3 11.1 218 230-462 2-257 (511)
30 3e6u_A LANC-like protein 1; al 88.0 1.3 4.3E-05 47.0 8.6 91 209-306 231-321 (411)
31 3k11_A Putative glycosyl hydro 87.5 0.33 1.1E-05 52.4 3.8 138 142-311 87-241 (445)
32 2v8i_A Pectate lyase; periplas 87.2 0.81 2.8E-05 49.4 6.4 98 181-285 31-140 (543)
33 3e6u_A LANC-like protein 1; al 80.0 6.1 0.00021 41.7 9.6 116 167-305 250-366 (411)
34 1wzz_A Probable endoglucanase; 78.4 8.7 0.0003 39.6 10.0 145 105-266 58-225 (334)
35 1kwf_A Endoglucanase A; hydrol 66.4 19 0.00066 37.5 9.2 141 105-261 72-232 (363)
36 2kus_A SM-AMP-1.1A; plant anti 65.5 3.2 0.00011 29.3 2.0 25 549-573 3-28 (35)
37 1lu0_A CMTI-I, trypsin inhibit 65.1 2.8 9.6E-05 28.2 1.6 22 545-572 8-29 (29)
38 1wu4_A Xylanase Y; (alpla/alph 63.1 43 0.0015 35.3 11.2 148 105-265 79-251 (396)
39 2ljs_A Trypsin inhibitor 3; be 60.5 4.1 0.00014 27.2 1.7 23 544-572 8-30 (30)
40 1v5d_A Chitosanase; chitosan d 49.7 2.4E+02 0.0083 29.3 16.3 141 109-266 92-252 (386)
41 1wkx_A Hevein isoform 2; aller 49.7 7.2 0.00025 28.7 1.7 22 552-573 2-26 (43)
42 3ren_A Glycosyl hydrolase, fam 44.0 23 0.00077 37.0 5.1 67 392-459 119-185 (350)
43 2g0d_A Nisin biosynthesis prot 42.1 44 0.0015 34.4 7.0 113 167-298 226-349 (409)
44 3h7l_A Endoglucanase; dehydrog 38.0 2E+02 0.0069 31.9 11.8 153 143-313 309-484 (586)
45 1gxm_A Pectate lyase; mechanis 38.0 68 0.0023 33.2 7.5 87 176-265 36-126 (332)
46 1r76_A Pectate lyase; A-helica 35.4 84 0.0029 33.4 7.8 49 216-265 150-204 (408)
47 2g0d_A Nisin biosynthesis prot 34.8 1.9E+02 0.0064 29.6 10.5 84 226-309 219-314 (409)
48 3qxf_A Endoglucanase; cellulas 30.8 3.2E+02 0.011 28.3 11.3 136 105-261 43-204 (355)
49 1wgn_A UBAP1, ubiquitin associ 30.7 21 0.00072 28.2 1.7 30 97-126 18-59 (63)
50 1mct_I Trypsin inhibitor A; co 30.7 18 0.00063 24.1 1.1 21 545-572 8-28 (28)
51 2po8_A Mcoti-II; oxidative fol 29.2 23 0.00079 24.4 1.5 24 544-573 5-28 (34)
52 3ren_A Glycosyl hydrolase, fam 28.3 1.9E+02 0.0065 30.0 9.0 138 105-265 72-223 (350)
53 1h12_A Endo-1,4-beta-xylanase; 27.7 1.5E+02 0.0053 31.2 8.4 138 105-264 87-261 (405)
54 2b4j_C PC4 and SFRS1 interacti 25.7 51 0.0018 28.3 3.4 47 390-436 50-96 (98)
55 3eu8_A Putative glucoamylase; 24.9 1.5E+02 0.005 31.8 7.5 94 168-266 20-121 (430)
56 2lb7_A WAMP-1A, antimicrobial 23.7 30 0.001 25.5 1.4 22 552-573 3-27 (44)
57 2v8i_A Pectate lyase; periplas 22.2 60 0.0021 35.3 3.8 100 132-254 368-468 (543)
No 1
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=100.00 E-value=6.1e-141 Score=1154.78 Aligned_cols=433 Identities=28% Similarity=0.424 Sum_probs=383.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCcCCCCCCCcccccccccCCCCCCCCCceeeeeccchhhhccCHHHH
Q 008122 35 AKKRHMKKKVHDMFYHAYENYLTHAFPHDELKPLSKSFTDSLSELGNLKLEHLPQHYNGSALTLIESMSSLVIMGNNTEF 114 (577)
Q Consensus 35 ~~~~~~r~~Vk~~f~hAw~~Y~~~Awg~DEL~P~S~~~~d~~~~~G~~~~~~~~~~~~G~glTLVDSLDTL~IMGl~~EF 114 (577)
+.+.+||++||+||+|||++|++||||||||+|+|++++|+ ++|||+|||||||||+|||+++||
T Consensus 10 ~~~~~rr~~Vk~~F~haw~~Y~~~Awg~DEL~PlS~~g~d~---------------~gg~g~TlVDsLDTL~IMgl~~Ef 74 (503)
T 1hcu_A 10 SPNPTRAAAVKAAFQTSWNAYHHFAFPHDDLHPVSNSFDDE---------------RNGWGSSAIDGLDTAILMGDADIV 74 (503)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHTTTSSEEETTTTEEECT---------------TTTSCHHHHHHHHHHHHTTCHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCccccccCcCCccCC---------------CCCcceeehhhccchhhcCCHHHH
Confidence 34567999999999999999999999999999999887765 578999999999999999999999
Q ss_pred HHHHHHHHHhCCCcc----cccccccchhhhhcccchhhhhccccchhhhcc-ccchHHHHHHHHHHHhhhccCCCCCCC
Q 008122 115 ERAVLWLSENLNFDV----DARINLFECNIRVLGGLVSAHILATDSANRLVQ-GSYKNQLLTLAEDLGRRFLPAFDTPTG 189 (577)
Q Consensus 115 ~~A~~~v~~~l~F~~----d~~VsvFETtIR~LGGLLSAY~Ls~d~~~~~~~-~~y~~~LL~kA~dLadrLlpAFdTptG 189 (577)
++|++||. +++|++ +..|||||||||+||||||||+||+|+...+.. +.|.+.||+||+||||||+||||||||
T Consensus 75 ~~A~~~v~-~l~f~~~~~~~~~VsvFETtIR~LGGLLSAy~Ls~~~~~~~~~~~~~~~~lL~kA~dLadrLlpAFdTptg 153 (503)
T 1hcu_A 75 NTILQYVP-QINFTTTAVANQGSSVFETNIRYLGGLLSAYDLLRGPFSSLATNQTLVNSLLRQAQTLANGLKVAFTTPSG 153 (503)
T ss_dssp HHHHHHGG-GCCTTCCSSTTCCEEHHHHHHHHHHHHHHHHHHHHTTTGGGCCCHHHHHHHHHHHHHHHHHHGGGGCSSSS
T ss_pred HHHHHHHH-hCCCCcccccCCccchheeehhhHhHHHHHHHHccCccccccccccchHHHHHHHHHHHHHHHHhhcCCCC
Confidence 99999997 899998 899999999999999999999999997544432 345679999999999999999999999
Q ss_pred CccceeeccCCCCCCCCCCccccccccchhhhhHHHHhhCCchHHHHHHHHHHHHHhccC----CCCCcceeeecCCCce
Q 008122 190 LPYAWINLKYGVMENETNETSTSGCGSLILEMGALSRLTGDPIYESAALRALRRLWSMRS----SLNLLGTTLDVTTGEW 265 (577)
Q Consensus 190 iP~~~vNl~~g~~~~~~~~t~lAe~GTl~LEF~~LS~lTGd~kY~~~a~ra~~~L~~~~~----~~gL~~~~id~~tG~~ 265 (577)
||+++||+++|........+++||+||++|||++||+|||||+|+++|+|+++.||+.++ ..||+|+.||+.+|+|
T Consensus 154 iP~~~vnl~~~~~~~~~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~ 233 (503)
T 1hcu_A 154 VPDPTVFFNPTVRRSGASSNNVAEIGSLVLEWTRLSDLTGNPQYAQLAQKGESYLLNPKGSPEAWPGLIGTFVSTSNGTF 233 (503)
T ss_dssp CCCSEEECSSSCEECCCSEEEHHHHTTSHHHHHHHHHHHSCTHHHHHHHHHHHHHHSCCBSCCSBTTBCCSEEETTTCCB
T ss_pred CCcceeecccCCCCCCCCccccccccceeeehHHHHHHhCChHHHHHHHHHHHHHHhhhcccCCCCCceeeEEeCCCCcc
Confidence 999999999987666666789999999999999999999999999999999999999765 5899999999999999
Q ss_pred ecccccccCCCchhhhhHHHHHHhcCch--HHHHHHHHHHHHHHHHhhcCCC----ccccccCCCcceeccccccccccc
Q 008122 266 IEYSSGIGAGVDSFYEYLFKAHILFGKE--DFWRMFHSAYLAVQKYFRHGPW----YHEADMRNGKATYWQLTSLQAFWP 339 (577)
Q Consensus 266 ~~~~~~~Ga~~DSyYEYLlK~~iL~g~~--~~~~m~~~a~~~i~k~l~~~~~----~~~~~~~~g~~~~~~~~hL~cF~p 339 (577)
++..+++||++|||||||+|+|+|+|+. +|++||.+|+++|++||+..|+ +..+....|.....+|+||+||+|
T Consensus 234 ~~~~~~~Ga~~DS~YEYLlK~~il~g~~~~~y~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~ 313 (503)
T 1hcu_A 234 QDSSGSWSGLMDSFYEYLIKMYLYDPVAFAHYKDRWVLGADSTIGHLGSHPSTRKDLTFLSSYNGQSTSPNSGHLASFGG 313 (503)
T ss_dssp CCCEECSSTTTHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHHHHHTEECBTTCTTCCEECEEETTEEESEEEGGGGGHH
T ss_pred cCCeeeecCCCccHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchhhhhhh
Confidence 9999999999999999999999999985 7999999999999999986653 112222233334456999999999
Q ss_pred cchhhcccccc-------chhhHHHHHHHHH--HhCCCCcEEEccCcc-------------------ccCCCCcCCCChh
Q 008122 340 GLQVLVGDIAA-------ANSSHREFVHVWK--KFGVLPERYLLDHLM-------------------LHPTEKYYPLRPE 391 (577)
Q Consensus 340 G~~~L~g~~~~-------a~~~~~~~~~~~~--~~Gl~PE~~~~~~~~-------------------~~~~~~~Y~LRPE 391 (577)
||++|+|++.. |.+....|...|. ++|++||+|.++.+. +.+.+++|+||||
T Consensus 314 G~~aLgg~~~~~~~~~~~a~~L~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~LRPE 393 (503)
T 1hcu_A 314 GNFILGGILLNEQKYIDFGIKLASSYFGTYTQTASGIGPEGFAWVDSVTGAGGSPPSSQSGFYSSAGFWVTAPYYILRPE 393 (503)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTSSSSCCCSEEECCBTTTCCSCCCCGGGHHHHHHHSCEEEECCBCCCCH
T ss_pred HHHHhcCcccccHHHHHHHHHHHHHHHHHHHhCccCCCceEEEeecCccccccCCcccccccccCCCceeccccccCChH
Confidence 99999997643 2233334444454 479999999997543 1234578999999
Q ss_pred hHHHHHHHHHhcCChhHHHHHHHHHHHHHhhcccCCCccccccccc---cccCCcchhHHHHHHhHHHHHhccC-CCCCC
Q 008122 392 LAESTFYLYQATKDPWYLEVGESIVNSLNSYTKVDGGFASIRDVTT---MQLEDHQHSFFLAETCKYLYLLFDD-SFLVD 467 (577)
Q Consensus 392 ~iES~fyLyR~TgD~~Yre~gW~if~aiek~~r~~~Gya~i~dV~~---~~~~D~meSFflAETLKYLYLLFsd-~~~~l 467 (577)
+|||+|||||+||||+||||||+||++||++|||+|||++|+||++ ++++|+||||||||||||||||||| +.++|
T Consensus 394 ~iES~fylyR~TgD~~yre~gw~if~ai~k~~r~~~Gya~i~dV~~~~~~~~~D~meSF~laETLKYlYLLFsd~~~i~L 473 (503)
T 1hcu_A 394 TLESLYYAYRVTGDSKWQDLAWEALSAIEDACRAGSAYSSINDVTQANGGGASDDMESFWFAEALKYAYLIFAEESDVQV 473 (503)
T ss_dssp HHHHHHHHHHHHCBHHHHHHHHHHHHHHHHHHEETTEECCBSCTTSTTCSCBCSCBCHHHHHTHHHHHHHHHSCCCSSSC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhccCCcccccccCCCCCCcCCccchHHHHHHHHHHheeccCCccccc
Confidence 9999999999999999999999999999999999999999999998 7899999999999999999999998 58899
Q ss_pred -----CCeEecCCCccccccc
Q 008122 468 -----RNYVFTTEGHPLPVLS 483 (577)
Q Consensus 468 -----d~~VFnTEaHPl~i~~ 483 (577)
|+||||||||||||..
T Consensus 474 ~~~~~d~~VFNTEAHPl~i~~ 494 (503)
T 1hcu_A 474 QATGGNKFVFNTEAHPFSIRS 494 (503)
T ss_dssp CTTSCCCEEECTTSCEEECCC
T ss_pred ccCCCCCeEEcCCCccccCCC
Confidence 9999999999999975
No 2
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=100.00 E-value=2e-140 Score=1144.63 Aligned_cols=428 Identities=28% Similarity=0.402 Sum_probs=376.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCccCCCcCCCCCCCcccccccccCCCCCCCCCceeeeeccchhhhccCHHHHHHH
Q 008122 38 RHMKKKVHDMFYHAYENYLTHAFPHDELKPLSKSFTDSLSELGNLKLEHLPQHYNGSALTLIESMSSLVIMGNNTEFERA 117 (577)
Q Consensus 38 ~~~r~~Vk~~f~hAw~~Y~~~Awg~DEL~P~S~~~~d~~~~~G~~~~~~~~~~~~G~glTLVDSLDTL~IMGl~~EF~~A 117 (577)
.+||++||+||+|||++|++||||||||+|+|++++|+ ++|||+|||||||||+|||+++||++|
T Consensus 3 ~~r~~~Vk~~F~haw~~Y~~~Awg~DEl~PlS~~~~d~---------------~gg~g~TlVDsLDTL~IMgl~~Ef~~a 67 (475)
T 2ri9_A 3 QAKADAVKEAFQHAWNGYMKYAFPHDELTPVSNGHADS---------------RNGWGASAVDALSTAVIMGKADVVNAI 67 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSSEEETTTTEEECT---------------TTTSCHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCccCC---------------CCCcceeehhhccchhhcCCHHHHHHH
Confidence 46999999999999999999999999999999887765 578999999999999999999999999
Q ss_pred HHHHHHhCCCcc-cccccccchhhhhcccchhhhhcc-ccchhhhccccchHHHHHHHHHHHhhhccCCCCCCCCcccee
Q 008122 118 VLWLSENLNFDV-DARINLFECNIRVLGGLVSAHILA-TDSANRLVQGSYKNQLLTLAEDLGRRFLPAFDTPTGLPYAWI 195 (577)
Q Consensus 118 ~~~v~~~l~F~~-d~~VsvFETtIR~LGGLLSAY~Ls-~d~~~~~~~~~y~~~LL~kA~dLadrLlpAFdTptGiP~~~v 195 (577)
++||. +++|++ |..|||||||||+||||||||+|| ++.......+.|.+.||+||+||||||+||||||||||+++|
T Consensus 68 ~~~v~-~~~f~~~~~~vsvFETtIR~LGGLLSAy~Ls~g~~~~~~~~~~~~~~lL~kA~dLadrLlpAF~TptgiP~~~v 146 (475)
T 2ri9_A 68 LEHVA-DIDFSKTSDTVSLFETTIRYLAGMLSGYDLLQGPAKNLVDNQDLIDGLLDQSRNLADVLKFAFDTPSGVPYNNI 146 (475)
T ss_dssp HHHHH-HCCTTCCSSCEEHHHHHHHHHHHHHHHHHHHHTTTTTSCCCHHHHHHHHHHHHHHHHHHGGGGCSSSSCCCSEE
T ss_pred HHHHH-hCCCCcCCCccchhheehHhHhHHhHHHHhccCccccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCcee
Confidence 99997 799999 999999999999999999999999 653111122335579999999999999999999999999999
Q ss_pred eccCCCCCCCCCCccccccccchhhhhHHHHhhCCchHHHHHHHHHHHHHhcc--C---CCCCcceeeecCCCceecccc
Q 008122 196 NLKYGVMENETNETSTSGCGSLILEMGALSRLTGDPIYESAALRALRRLWSMR--S---SLNLLGTTLDVTTGEWIEYSS 270 (577)
Q Consensus 196 Nl~~g~~~~~~~~t~lAe~GTl~LEF~~LS~lTGd~kY~~~a~ra~~~L~~~~--~---~~gL~~~~id~~tG~~~~~~~ 270 (577)
|++++... ....+++||+||++|||++||+|||||+|+++|+|+++.||+.+ + .+||+|+.||+.+|+|++..+
T Consensus 147 nl~~~~~~-~~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~ 225 (475)
T 2ri9_A 147 NITSHGND-GATTNGLAVTGTLVLEWTRLSDLTGDEEYAKLSQKAESYLLKPQPSSSEPFPGLVGSSININDGQFADSRV 225 (475)
T ss_dssp CTTTCCBC-CCSEEEHHHHHSCHHHHHHHHHHHSCTHHHHHHHHHHHHHHSCSSGGGCSBTTBCCSEEETTTCCBCCCCB
T ss_pred ecccCCCc-CCCccchhccccceeeHHHHHHHhCCHHHHHHHHHHHHHHHhhccccccCCCCCcceEEeCCCCcccCCce
Confidence 99997543 33468999999999999999999999999999999999999877 2 579999999999999999999
Q ss_pred cccCCCchhhhhHHHHHHhcCch--HHHHHHHHHHHHHHHHhhcCCC----ccccccCCCcceeccccccccccccchhh
Q 008122 271 GIGAGVDSFYEYLFKAHILFGKE--DFWRMFHSAYLAVQKYFRHGPW----YHEADMRNGKATYWQLTSLQAFWPGLQVL 344 (577)
Q Consensus 271 ~~Ga~~DSyYEYLlK~~iL~g~~--~~~~m~~~a~~~i~k~l~~~~~----~~~~~~~~g~~~~~~~~hL~cF~pG~~~L 344 (577)
++||++|||||||+|+|+|+|+. +|++||.+|+++|++||+..|+ +..+....|....++|+||+||+|||++|
T Consensus 226 ~~Ga~~DS~YEYLlK~~il~g~~~~~~~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~aL 305 (475)
T 2ri9_A 226 SWNGGDDSFYEYLIKMYVYDPKRFETYKDRWVLAAESTIKHLKSHPKSRPDLTFLSSYSNRNYDLSSQHLTCFDGGSFLL 305 (475)
T ss_dssp CSSTTTHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHHHHHTEECCSSCTTCCEECEEETTEEECEEETGGGGHHHHHHH
T ss_pred eecCCcchHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchHHHhHHHHHHh
Confidence 99999999999999999999985 7999999999999999987653 11222223333445699999999999999
Q ss_pred cccccc-------chhhHHHHHHHHH--HhCCCCcEEEccCcc-------------ccCCCCcCCCChhhHHHHHHHHHh
Q 008122 345 VGDIAA-------ANSSHREFVHVWK--KFGVLPERYLLDHLM-------------LHPTEKYYPLRPELAESTFYLYQA 402 (577)
Q Consensus 345 ~g~~~~-------a~~~~~~~~~~~~--~~Gl~PE~~~~~~~~-------------~~~~~~~Y~LRPE~iES~fyLyR~ 402 (577)
+|++.. |.+....|+..|. ++|++||+|.++.+. +.+.+++|+||||+|||+|||||+
T Consensus 306 gg~~~~~~~~~~~a~~l~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~LRPE~iES~fylyR~ 385 (475)
T 2ri9_A 306 GGTVLDRQDFIDFGLELVDGCEATYNSTLTKIGPDSWGWDPKKVPSDQKEFYEKAGFYISSGSYVLRPEVIESFYYAHRV 385 (475)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHHHTSSSSCCCSEEECCTTCCCGGGHHHHHHHSCEEEECCBCSCCHHHHHHHHHHHH
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHhcccCCCCcEEEeecCcccccccccccCCCceecccccCCChHHHHHHHHHHHH
Confidence 997643 2333334555554 479999999997642 123457899999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhhcccCCCccccccccc---cccCCcchhHHHHHHhHHHHHhccC-CCCCC-----CCeEec
Q 008122 403 TKDPWYLEVGESIVNSLNSYTKVDGGFASIRDVTT---MQLEDHQHSFFLAETCKYLYLLFDD-SFLVD-----RNYVFT 473 (577)
Q Consensus 403 TgD~~Yre~gW~if~aiek~~r~~~Gya~i~dV~~---~~~~D~meSFflAETLKYLYLLFsd-~~~~l-----d~~VFn 473 (577)
||||+||||||+||++||++|||+|||++|+||++ ++++|+||||||||||||||||||| +.++| |+||||
T Consensus 386 TgD~~yr~~gw~~f~ai~k~~rt~~G~a~i~dV~~~~~~~~~D~meSF~laETLKYlYLLFsd~~~i~l~~~~~d~~VFN 465 (475)
T 2ri9_A 386 TGKEIYRDWVWNAFVAINSTCRTDSGFAAVSDVNKANGGSKYDNQESFLFAEVMKYSYLAHSEDAAWQVQKGGKNTFVYN 465 (475)
T ss_dssp HCCHHHHHHHHHHHHHHHHHTBCSSSBCCBSCTTSGGGSSBBSCCCTHHHHTHHHHHHHTTSCCCTTSCCSTTCCSEEEC
T ss_pred hCCHHHHHHHHHHHHHHHHHHccccCCcccccccCCCCCCcCCccchHHHHHHHHHHHhcccCCcccccccCCCCCeEEc
Confidence 99999999999999999999999999999999998 7899999999999999999999998 48899 999999
Q ss_pred CCCcccccc
Q 008122 474 TEGHPLPVL 482 (577)
Q Consensus 474 TEaHPl~i~ 482 (577)
||||||||.
T Consensus 466 TEAHPl~i~ 474 (475)
T 2ri9_A 466 TEAHPISVA 474 (475)
T ss_dssp TTSCEEECC
T ss_pred CCCCCCCCC
Confidence 999999985
No 3
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=100.00 E-value=9.8e-141 Score=1154.19 Aligned_cols=439 Identities=29% Similarity=0.463 Sum_probs=385.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCccCCCcCCCCCCCcccccccccCCCCCC-C-CCceeeeeccchhhhc-------
Q 008122 38 RHMKKKVHDMFYHAYENYLTHAFPHDELKPLSKSFTDSLSELGNLKLEHLPQHY-N-GSALTLIESMSSLVIM------- 108 (577)
Q Consensus 38 ~~~r~~Vk~~f~hAw~~Y~~~Awg~DEL~P~S~~~~d~~~~~G~~~~~~~~~~~-~-G~glTLVDSLDTL~IM------- 108 (577)
.+||++||+||+|||++|++||||||||+|+|++++|+ .+ + |||+|||||||||+||
T Consensus 3 ~~rr~~Vk~~F~haw~~Y~~~Awg~DEL~PlS~~g~~~--------------~~~g~g~G~TlVDSLDTL~IM~~~~~~~ 68 (511)
T 1dl2_A 3 GEMRDRIESMFLESWRDYSKHGWGYDVYGPIEHTSHNM--------------PRGNQPLGWIIVDSVDTLMLMYNSSTLY 68 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCSEEETTTTEEECS--------------STTCCCCCTTHHHHHHHHHHHHHHCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCcCCC--------------CccCCccceeeeecccceEEeccccccc
Confidence 46899999999999999999999999999999988765 13 3 8999999999999999
Q ss_pred --cCHHHHHHHHHHHHHhCCCcccccccccchhhhhcccchhhhhccccchhhhccccchHHHHHHHHHHHhhhccCCC-
Q 008122 109 --GNNTEFERAVLWLSENLNFDVDARINLFECNIRVLGGLVSAHILATDSANRLVQGSYKNQLLTLAEDLGRRFLPAFD- 185 (577)
Q Consensus 109 --Gl~~EF~~A~~~v~~~l~F~~d~~VsvFETtIR~LGGLLSAY~Ls~d~~~~~~~~~y~~~LL~kA~dLadrLlpAFd- 185 (577)
|+++||++|++||.++++|++|..|||||||||+||||||||+||++. ....++.||+||+||||||+||||
T Consensus 69 ~~gl~~Ef~~A~~~V~~~l~F~~d~~VsvFETtIR~LGGLLSAy~Ls~~~-----~~~~d~~lL~kA~dLadrLlpAFd~ 143 (511)
T 1dl2_A 69 KSEFEAEIQRSEHWINDVLDFDIDAEVNVFETTIRMLGGLLSAYHLSDVL-----EVGNKTVYLNKAIDLGDRLALAFLS 143 (511)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCSSEEEHHHHHHHHHHHHHHHHHHHHHH-----TCSCHHHHHHHHHHHHHHHHGGGGS
T ss_pred cCCcHHHHHHHHHHHHHhcCCCCCceechhheehhhhhhhhhHHHhcccc-----cCCCcHHHHHHHHHHHHHHHHhhcC
Confidence 999999999999998999999999999999999999999999999332 011234999999999999999999
Q ss_pred CCCCCccceeeccCCCCCCC---CCCccccccccchhhhhHHHHhhCCchHHHHHHHHHHHHHhcc----CCCCCcceee
Q 008122 186 TPTGLPYAWINLKYGVMENE---TNETSTSGCGSLILEMGALSRLTGDPIYESAALRALRRLWSMR----SSLNLLGTTL 258 (577)
Q Consensus 186 TptGiP~~~vNl~~g~~~~~---~~~t~lAe~GTl~LEF~~LS~lTGd~kY~~~a~ra~~~L~~~~----~~~gL~~~~i 258 (577)
||||||+++||+++|+.... .+.+++||+||++|||++||+|||||+|+++|+|+++.||+.+ +..||+|+.|
T Consensus 144 TptgiP~~~vnl~~g~~~~~~~~~~~s~~Ae~gSl~LEF~~LS~LTGd~~Y~~~a~r~~~~l~~~~~~~~~~~GL~p~~i 223 (511)
T 1dl2_A 144 TQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEFKYLAYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYT 223 (511)
T ss_dssp SSSSCCCSEEETTTCCEECCSSGGGCEEHHHHSSCHHHHHHHHHHHTCHHHHHHHHTTHHHHHHHHTHHHHHTTCCBSEE
T ss_pred CCCCCCCceeecccCCCCCCCCCCcccccccccceeeeHHHHHHHHCChHHHHHHHHHHHHHHhcccccCCCCCCcceEE
Confidence 99999999999999974322 3468899999999999999999999999999999999999987 6689999999
Q ss_pred ecCCCceecccccccCCCchhhhhHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCC----CccccccC---CCcceeccc
Q 008122 259 DVTTGEWIEYSSGIGAGVDSFYEYLFKAHILFGKEDFWRMFHSAYLAVQKYFRHGP----WYHEADMR---NGKATYWQL 331 (577)
Q Consensus 259 d~~tG~~~~~~~~~Ga~~DSyYEYLlK~~iL~g~~~~~~m~~~a~~~i~k~l~~~~----~~~~~~~~---~g~~~~~~~ 331 (577)
|+.+|+|++..+++||++|||||||+|+|+|+++++|++||.+|+++|++||.+.+ +....++. +|... ++|
T Consensus 224 ~~~tg~~~~~~~~lGa~~DS~YEYLlK~~il~~d~~y~~m~~~a~~~i~~~L~~~~~~~~~~~~~~~~~~~~g~~~-~~~ 302 (511)
T 1dl2_A 224 FPDTGKFGASTIRFGSRGDSFYEYLLKQYLLTHETLYYDLYRKSMEGMKKHLLAQSKPSSLWYIGEREQGLHGQLS-PKM 302 (511)
T ss_dssp CTTTCCBCSCCBCSSTTTHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTEEECTTTCCEEECBBTTCTTSCCB-CEE
T ss_pred cCCCCCccCCeeeecCCCCcHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCCcEEEEEeecCCCCccc-ccc
Confidence 99999999999999999999999999999999889999999999999999997432 22233432 44443 469
Q ss_pred cccccccccchhhccc------------------cccchhhHHHHHHHHH--HhCCCCcEEEccCcc-------------
Q 008122 332 TSLQAFWPGLQVLVGD------------------IAAANSSHREFVHVWK--KFGVLPERYLLDHLM------------- 378 (577)
Q Consensus 332 ~hL~cF~pG~~~L~g~------------------~~~a~~~~~~~~~~~~--~~Gl~PE~~~~~~~~------------- 378 (577)
+||+||+|||++|+|. ++.|.+....|..+|. ++|++||+|.++.+.
T Consensus 303 ~hL~cF~gG~~aLg~~~~~~~~~a~~~~~~~~~~~~~a~~l~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~d 382 (511)
T 1dl2_A 303 DHLVCFMGGLLASGSTEGLSIHEARRRPFFSKSDWDLAKGITDTCYQMYKQSSSGLAPEIVVFNDGNIKQDGWWRSSVGD 382 (511)
T ss_dssp EGGGGGHHHHHHHHHHTTCCHHHHTTSTTCCHHHHHHHHHHHHHHHHHHHTSTTSCCCSEEEECCSCCC-CCCEECSSSS
T ss_pred chhhhchhHHHHhccccCCChhhhhhcccccHHHHHHHHHHHHHHHHHHhcCccCCCceEEEeecCCccccccccccccc
Confidence 9999999999999982 1223334445555554 589999999997542
Q ss_pred --ccCCCCcCCCChhhHHHHHHHHHhcCChhHHHHHHHHHHHHHhhcccCCC------cccccccccc--ccCCcchhHH
Q 008122 379 --LHPTEKYYPLRPELAESTFYLYQATKDPWYLEVGESIVNSLNSYTKVDGG------FASIRDVTTM--QLEDHQHSFF 448 (577)
Q Consensus 379 --~~~~~~~Y~LRPE~iES~fyLyR~TgD~~Yre~gW~if~aiek~~r~~~G------ya~i~dV~~~--~~~D~meSFf 448 (577)
+++.+++|+||||+|||+|||||+||||+||||||+||++||++|||+|| |++|+||++. .++|+|||||
T Consensus 383 ~~~~~~d~~y~LRPE~iES~fylyR~TgD~~yre~gw~~f~ai~k~~rt~~G~~~~~gya~i~dV~~~~~~~~D~mESF~ 462 (511)
T 1dl2_A 383 FFVKPLDRHNLQRPETVESIMFMYHLSHDHKYREWGAEIATSFFENTCVDCNDPKLRRFTSLSDCITLPTKKSNNMESFW 462 (511)
T ss_dssp EEECGGGCCBCCCCHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHEESTTCTTTCEECCEEESSSSSCEECSCCCHHH
T ss_pred eeeccCCcccCcCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhccccCCccccccccccccccCCCCcCCCcchhh
Confidence 45668899999999999999999999999999999999999999999999 9999999985 6899999999
Q ss_pred HHHHhHHHHHhccCCCCCCCCeEecCCCcccccccccccCCCCCCCCCCCc
Q 008122 449 LAETCKYLYLLFDDSFLVDRNYVFTTEGHPLPVLSSWHDRLPEAYIPSNWT 499 (577)
Q Consensus 449 lAETLKYLYLLFsd~~~~ld~~VFnTEaHPl~i~~~~~~~~~~~~~~~~~~ 499 (577)
|||||||||||||| .++||+||||||||||||... ..+++.+++++|+
T Consensus 463 laETLKYlYLLFsd-~i~Ld~~VFNTEAHPl~i~~~--~~~~~~~~~~~w~ 510 (511)
T 1dl2_A 463 LAETLKYLYILFLD-EFDLTKVVFNTEAHPFPVLDE--EILKSQSLTTGWS 510 (511)
T ss_dssp HHTHHHHHHHHTCS-CCCTTSEEECTTSCEEECCCH--HHHHHTTCCCCCC
T ss_pred HHHHHHHHHHHccc-cccCCceeecCCCcceecCCC--CccccccccCCCc
Confidence 99999999999999 999999999999999999852 2345677889996
No 4
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=100.00 E-value=8.7e-140 Score=1139.67 Aligned_cols=427 Identities=34% Similarity=0.573 Sum_probs=379.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCcCCCCCCCcccccccccCCCCCCCCC-ceeeeeccchhhhccCH
Q 008122 33 WSAKKRHMKKKVHDMFYHAYENYLTHAFPHDELKPLSKSFTDSLSELGNLKLEHLPQHYNGS-ALTLIESMSSLVIMGNN 111 (577)
Q Consensus 33 ~~~~~~~~r~~Vk~~f~hAw~~Y~~~Awg~DEL~P~S~~~~d~~~~~G~~~~~~~~~~~~G~-glTLVDSLDTL~IMGl~ 111 (577)
...+.++||++||+||+|||++|++||||||||+|+|++++++ +.|+|| |+|||||||||||||++
T Consensus 13 ~~~~~~~rr~~Vk~~F~haw~~Y~~~Awg~DEl~P~S~~g~~~-------------~~fg~~~g~TlVDsLDTL~IMgl~ 79 (478)
T 1nxc_A 13 ADATIREKRAKIKEMMTHAWNNYKRYAWGLNELKPISKEGHSS-------------SLFGNIKGATIVDALDTLFIMGMK 79 (478)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEETTTTEEECC-------------GGGTTCCCHHHHHHHHHHHHTTCH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCcCC-------------CccCCcccchheecccceeecCCH
Confidence 3466777999999999999999999999999999999876642 135777 99999999999999999
Q ss_pred HHHHHHHHHHHHhCCCcccccccccchhhhhcccchhhhhccccchhhhccccchHHHHHHHHHHHhhhccCCCCCCCCc
Q 008122 112 TEFERAVLWLSENLNFDVDARINLFECNIRVLGGLVSAHILATDSANRLVQGSYKNQLLTLAEDLGRRFLPAFDTPTGLP 191 (577)
Q Consensus 112 ~EF~~A~~~v~~~l~F~~d~~VsvFETtIR~LGGLLSAY~Ls~d~~~~~~~~~y~~~LL~kA~dLadrLlpAFdTptGiP 191 (577)
+||++|++||.++++|++|..||||||||||||||||||+||+|+ +||+||+||||||+||||||||||
T Consensus 80 ~Ef~~A~~~v~~~l~f~~~~~vsvFETtIR~LGGLLSAy~Lsgd~-----------~lL~kA~dLad~LlpAFdTptgiP 148 (478)
T 1nxc_A 80 TEFQEAKSWIKKYLDFNVNAEVSVFEVNIRFVGGLLSAYYLSGEE-----------IFRKKAVELGVKLLPAFHTPSGIP 148 (478)
T ss_dssp HHHHHHHHHHHHHCCCCCSSEEEHHHHHHHHHHHHHHHHHHHCCH-----------HHHHHHHHHHHHHGGGGCSSSSCC
T ss_pred HHHHHHHHHHHhhcCccCCCccchhheehhhhhhhhhhhhccCCH-----------HHHHHHHHHHHHHHHhhcCCCCCC
Confidence 999999999999999999999999999999999999999999998 999999999999999999999999
Q ss_pred cceeeccCCCCCCC----CCCccccccccchhhhhHHHHhhCCchHHHHHHHHHHHHHhccCCCCCcceeeecCCCceec
Q 008122 192 YAWINLKYGVMENE----TNETSTSGCGSLILEMGALSRLTGDPIYESAALRALRRLWSMRSSLNLLGTTLDVTTGEWIE 267 (577)
Q Consensus 192 ~~~vNl~~g~~~~~----~~~t~lAe~GTl~LEF~~LS~lTGd~kY~~~a~ra~~~L~~~~~~~gL~~~~id~~tG~~~~ 267 (577)
+++||+++|+..+. .+.+++||+||++|||++||+|||||+|+++|+|+++.|++.+...||+|+.||+.+|+|++
T Consensus 149 ~~~vnl~~g~~~~~~~~~~~~s~lAe~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~GL~p~~i~~~tg~~~~ 228 (478)
T 1nxc_A 149 WALLNMKSGIGRNWPWASGGSSILAEFGTLHLEFMHLSHLSGDPVFAEKVMKIRTVLNKLDKPEGLYPNYLNPSSGQWGQ 228 (478)
T ss_dssp CSEEETTTCCEECCTTSGGGCEEHHHHTTCHHHHHHHHHHHCCTHHHHHHHHHHHHHHHSCCGGGCCCSEECTTTCCBCS
T ss_pred cceeecccccCCCCcccCCCCcccccccchhhhHHHHHHHHCChHHHHHHHHHHHHHHhcCCCCCccccccCCCCCCccC
Confidence 99999999976432 23578999999999999999999999999999999999999887889999999999999999
Q ss_pred ccccccCCCchhhhhHHHHHHhcCc--hHHHHHHHHHHHHHHHHhhc---CCCccccccCCCcceeccccccccccccch
Q 008122 268 YSSGIGAGVDSFYEYLFKAHILFGK--EDFWRMFHSAYLAVQKYFRH---GPWYHEADMRNGKATYWQLTSLQAFWPGLQ 342 (577)
Q Consensus 268 ~~~~~Ga~~DSyYEYLlK~~iL~g~--~~~~~m~~~a~~~i~k~l~~---~~~~~~~~~~~g~~~~~~~~hL~cF~pG~~ 342 (577)
..+++||++|||||||+|+|+|+|+ ++|++||.+|+++|++||.+ +.+....++.+|... ++|+||+||+|||+
T Consensus 229 ~~~~~Ga~~DS~YEYLlK~~il~g~~d~~~~~m~~~a~~~i~~~l~~~~~~~~~~v~~~~~~~~~-~~~~hL~cF~gG~~ 307 (478)
T 1nxc_A 229 HHVSVGGLGDSFYEYLLKAWLMSDKTDLEAKKMYFDAVQAIETHLIRKSSGGLTYIAEWKGGLLE-HKMGHLTCFAGGMF 307 (478)
T ss_dssp CEECSSTTTHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTEEECTTSCEEECEEETTEEE-CEEETGGGGHHHHH
T ss_pred ceeeecCCCchHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHhcccCCCCcEEEEeccCCccc-ccccchhhhhHHHH
Confidence 9999999999999999999999985 57999999999999999864 223333445556544 46999999999999
Q ss_pred hhccccccch----------hhHHHHHHHHH--HhCCCCcEEEccCc----cccCCCCcCCCChhhHHHHHHHHHhcCCh
Q 008122 343 VLVGDIAAAN----------SSHREFVHVWK--KFGVLPERYLLDHL----MLHPTEKYYPLRPELAESTFYLYQATKDP 406 (577)
Q Consensus 343 ~L~g~~~~a~----------~~~~~~~~~~~--~~Gl~PE~~~~~~~----~~~~~~~~Y~LRPE~iES~fyLyR~TgD~ 406 (577)
+|+|++..+. +....|+..|. ++|++||+|.++.+ .+.+.+++|+||||+|||+|||||+||||
T Consensus 308 aLg~~~~~~~~~~~~l~~a~~l~~tC~~~y~~~~tgl~PE~~~~~~~~~~~~~~~~~~~y~LRPE~iES~fylyR~TgD~ 387 (478)
T 1nxc_A 308 ALGADGAPEARAQHYLELGAEIARTCHESYNRTYVKLGPEAFRFDGGVEAIATRQNEKYYILRPEVIETYMYMWRLTHDP 387 (478)
T ss_dssp HHTSTTSCTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCCSEEESSTTCSSBCCSGGGCCBCSCCHHHHHHHHHHHHHCCH
T ss_pred HhccccccccchHHHHHHHHHHHHHHHHHHHhcccCCCCeEEEeccCcccccccccccccCCChHHHHHHHHHHHHhCCH
Confidence 9999875431 11122333332 47999999999764 23456789999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhhcccCCCccccccccc--cccCCcchhHHHHHHhHHHHHhccC-CCCCCCCeEecCCCccccccc
Q 008122 407 WYLEVGESIVNSLNSYTKVDGGFASIRDVTT--MQLEDHQHSFFLAETCKYLYLLFDD-SFLVDRNYVFTTEGHPLPVLS 483 (577)
Q Consensus 407 ~Yre~gW~if~aiek~~r~~~Gya~i~dV~~--~~~~D~meSFflAETLKYLYLLFsd-~~~~ld~~VFnTEaHPl~i~~ 483 (577)
+||||||+||++|||+|||+|||++|+||++ ++++|+||||||||||||||||||| +.++||+||||||||||||..
T Consensus 388 ~yre~gw~~f~ai~k~~r~~~G~a~i~dV~~~~~~~~D~meSF~laETLKYlYLLFsd~~~i~ld~~VFnTEAHPl~i~~ 467 (478)
T 1nxc_A 388 KYRTWAWEAVEALESHCRVNGGYSGLRDVYIARESYDDVQQSFFLAETLKYLYLIFSDDDLLPLEHWIFNTEAHPFPILR 467 (478)
T ss_dssp HHHHHHHHHHHHHHHHTEETTEECCBSCTTSSSCCBCCCBCHHHHHTHHHHHHHHTSCTTSSCTTTEEECTTSCEEECCC
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccccCCCCCCcCCCCCchHHHHHHHHHHeeccCCccCCCCCeeecCCCCceecCC
Confidence 9999999999999999999999999999996 4789999999999999999999998 588999999999999999976
Q ss_pred c
Q 008122 484 S 484 (577)
Q Consensus 484 ~ 484 (577)
.
T Consensus 468 ~ 468 (478)
T 1nxc_A 468 E 468 (478)
T ss_dssp -
T ss_pred C
Confidence 4
No 5
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=100.00 E-value=4.6e-139 Score=1142.93 Aligned_cols=419 Identities=35% Similarity=0.580 Sum_probs=377.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCcCCCCCCCcccccccccCCCCCCCCCceeeeeccchhhhccCHHHHHH
Q 008122 37 KRHMKKKVHDMFYHAYENYLTHAFPHDELKPLSKSFTDSLSELGNLKLEHLPQHYNGSALTLIESMSSLVIMGNNTEFER 116 (577)
Q Consensus 37 ~~~~r~~Vk~~f~hAw~~Y~~~Awg~DEL~P~S~~~~d~~~~~G~~~~~~~~~~~~G~glTLVDSLDTL~IMGl~~EF~~ 116 (577)
..+||++||+||+|||++|++||||||||+|+|++++|+ ++| |+|||||||||||||+++||++
T Consensus 85 ~~~rr~~Vk~~F~haW~~Y~~~Awg~DEL~PlS~~g~d~---------------fg~-g~TLVDSLDTL~IMgl~~EF~~ 148 (538)
T 1x9d_A 85 LNYRQKGVIDVFLHAWKGYRKFAWGHDELKPVSRSFSEW---------------FGL-GLTLIDALDTMWILGLRKEFEE 148 (538)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHCTTSSEEETTTTEEECS---------------SSS-CHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccccCCCCcccc---------------cCC-ceeeeeccceeeecCCHHHHHH
Confidence 347999999999999999999999999999999988775 344 9999999999999999999999
Q ss_pred HHHHHHHhCCCcccccccccchhhhhcccchhhhhccccchhhhccccchHHHHHHHHHHHhhhccCCCCCCCCccceee
Q 008122 117 AVLWLSENLNFDVDARINLFECNIRVLGGLVSAHILATDSANRLVQGSYKNQLLTLAEDLGRRFLPAFDTPTGLPYAWIN 196 (577)
Q Consensus 117 A~~~v~~~l~F~~d~~VsvFETtIR~LGGLLSAY~Ls~d~~~~~~~~~y~~~LL~kA~dLadrLlpAFdTptGiP~~~vN 196 (577)
|++||.++++|+++..||||||||||||||||||+||+|+ .||+||+||||||+||||||||||+++||
T Consensus 149 A~~~V~~~~~f~~d~~VsvFETtIR~LGGLLSAy~Lsgd~-----------~lL~kA~dLadrLlpAFdTptgiP~~~vn 217 (538)
T 1x9d_A 149 ARKWVSKKLHFEKDVDVNLFESTIRILGGLLSAYHLSGDS-----------LFLRKAEDFGNRLMPAFRTPSKIPYSDVN 217 (538)
T ss_dssp HHHHHHHHCCCCSSCEEEHHHHHHHHHHHHHHHHHHHCCH-----------HHHHHHHHHHHHHGGGGCSTTSCCCSEEE
T ss_pred HHHHHHHhcCCCCCceeehhheehhhhhhhhhHHHhcCCH-----------HHHHHHHHHHHHHHHhhcCCCCCCcceee
Confidence 9999999999999999999999999999999999999998 99999999999999999999999999999
Q ss_pred ccCCCCC--CCCCCccccccccchhhhhHHHHhhCCchHHHHHHHHHHHHHhcc-CCCCCcceeeecCCCceecc-cccc
Q 008122 197 LKYGVME--NETNETSTSGCGSLILEMGALSRLTGDPIYESAALRALRRLWSMR-SSLNLLGTTLDVTTGEWIEY-SSGI 272 (577)
Q Consensus 197 l~~g~~~--~~~~~t~lAe~GTl~LEF~~LS~lTGd~kY~~~a~ra~~~L~~~~-~~~gL~~~~id~~tG~~~~~-~~~~ 272 (577)
+++|+.. .+...+++||+||++|||++||+|||||+|+++|+|+++.||+.+ +..||+|+.||+.+|+|+.. .+++
T Consensus 218 l~~g~~~~~~~~~~s~lAe~GSl~LEF~~LS~LTGd~~Y~~~a~r~~~~l~~~~~~~~GL~p~~i~~~tG~~~~~~~~~l 297 (538)
T 1x9d_A 218 IGTGVAHPPRWTSDSTVAEVTSIQLEFRELSRLTGDKKFQEAVEKVTQHIHGLSGKKDGLVPMFINTHSGLFTHLGVFTL 297 (538)
T ss_dssp TTTCCEECCTTCSEEEHHHHHSSHHHHHHHHHHHCCTHHHHHHHHHHHHHHTCSCCBTTBCCSEEETTTCCEESTTEECS
T ss_pred ecccccCCCCcCCCceeccccceeeeHHHHHHHhCCcHHHHHHHHHHHHHHhcccCCCCCcceEEeCCCCCccCCcceee
Confidence 9999753 334568999999999999999999999999999999999999998 67899999999999999998 9999
Q ss_pred cCCCchhhhhHHHHHHhcC--chHHHHHHHHHHHHHHHHhhcCC----CccccccCCCcceeccccccccccccchhhcc
Q 008122 273 GAGVDSFYEYLFKAHILFG--KEDFWRMFHSAYLAVQKYFRHGP----WYHEADMRNGKATYWQLTSLQAFWPGLQVLVG 346 (577)
Q Consensus 273 Ga~~DSyYEYLlK~~iL~g--~~~~~~m~~~a~~~i~k~l~~~~----~~~~~~~~~g~~~~~~~~hL~cF~pG~~~L~g 346 (577)
||++|||||||+|+|+|+| +++|++||.+|+++|++||.+.+ .....++.+|... .+|+||+||+|||++|+|
T Consensus 298 Ga~~DS~YEYLlK~~il~g~~d~~y~~my~~a~~~i~~~L~~~~~~~~~~~v~~~~~g~~~-~~~~hL~cF~gG~~aLgg 376 (538)
T 1x9d_A 298 GARADSYYEYLLKQWIQGGKQETQLLEDYVEAIEGVRTHLLRHSEPSKLTFVGELAHGRFS-AKMDHLVCFLPGTLALGV 376 (538)
T ss_dssp STTTHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHTEEECTTTCCEEECEEETTEEE-CEEEGGGGHHHHHHHHHH
T ss_pred cCCccHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHhccCCCCCCceEEEeccCCccC-cccchHhhhhhhHHHhcC
Confidence 9999999999999999999 46899999999999999986432 2223444556554 459999999999999999
Q ss_pred cccc-------chhhHHHHHHHHH--HhCCCCcEEEccCc--------cccCCCCcCCCChhhHHHHHHHHHhcCChhHH
Q 008122 347 DIAA-------ANSSHREFVHVWK--KFGVLPERYLLDHL--------MLHPTEKYYPLRPELAESTFYLYQATKDPWYL 409 (577)
Q Consensus 347 ~~~~-------a~~~~~~~~~~~~--~~Gl~PE~~~~~~~--------~~~~~~~~Y~LRPE~iES~fyLyR~TgD~~Yr 409 (577)
++.. |.+....|+.+|. ++|++||+|.|+.+ .+.+.+++|+||||+|||+|||||+||||+||
T Consensus 377 ~~~~~~~~l~~a~~L~~tC~~~Y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~d~~y~LRPE~IES~fylyR~TgD~~yr 456 (538)
T 1x9d_A 377 YHGLPASHMELAQELMETCYQMNRQMETGLSPEIVHFNLYPQPGRRDVEVKPADRHNLLRPETVESLFYLYRVTGDRKYQ 456 (538)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHHHTSTTSCCCSEEECCSSCCTTCCSCBCCGGGCCBCCCCHHHHHHHHHHHHHCCTHHH
T ss_pred cccCcHHHHHHHHHHHHHHHHHHHhcccCCCceEEEeccCCCccccceeeeccCcccCCChHHHHHHHHHHHHhCCHHHH
Confidence 7643 2233334445554 58999999999763 24556789999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCC-ccccccccc---cccCCcchhHHHHHHhHHHHHhccCC--CCCCCCeEecCCCccccccc
Q 008122 410 EVGESIVNSLNSYTKVDGG-FASIRDVTT---MQLEDHQHSFFLAETCKYLYLLFDDS--FLVDRNYVFTTEGHPLPVLS 483 (577)
Q Consensus 410 e~gW~if~aiek~~r~~~G-ya~i~dV~~---~~~~D~meSFflAETLKYLYLLFsd~--~~~ld~~VFnTEaHPl~i~~ 483 (577)
||||+||++||++|||+|| |++|+||++ +.++|+|||||||||||||||||||+ .++||+||||||||||||..
T Consensus 457 e~gw~~f~ai~k~~rt~~Ggya~i~dV~~~~~~~~~D~mESFfLAETLKYlYLLFsd~~~~i~Ld~~VFNTEAHPl~i~~ 536 (538)
T 1x9d_A 457 DWGWEILQSFSRFTRVPSGGYSSINNVQDPQKPEPRDKMESFFLGETLKYLFLLFSDDPNLLSLDAYVFNTEAHPLPIWT 536 (538)
T ss_dssp HHHHHHHHHHHHHTBCTTSCBCCBSCTTCSSCCCBCSCBCHHHHHTHHHHHHHHHCCC-CCSCTTTEEECTTSCEEECC-
T ss_pred HHHHHHHHHHHHhcccccCCccccccccCCCCCCcCCCcccHHHHHHHHHHHHhcCCCCCcCcCCCeeecCCCccccCCC
Confidence 9999999999999999999 999999998 67999999999999999999999985 78999999999999999964
No 6
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=97.45 E-value=0.0016 Score=68.14 Aligned_cols=220 Identities=12% Similarity=0.013 Sum_probs=134.0
Q ss_pred hcccchhhhhccccchhhhccccchHHHHHHHHHHHhhhccCCCCCCCCccceeeccCCCCCCCCCCccccccccchhhh
Q 008122 142 VLGGLVSAHILATDSANRLVQGSYKNQLLTLAEDLGRRFLPAFDTPTGLPYAWINLKYGVMENETNETSTSGCGSLILEM 221 (577)
Q Consensus 142 ~LGGLLSAY~Ls~d~~~~~~~~~y~~~LL~kA~dLadrLlpAFdTptGiP~~~vNl~~g~~~~~~~~t~lAe~GTl~LEF 221 (577)
++|+|+-+|..+||+ .+++.|.+..+.+... ....+|- + ..-..|=+.+-+
T Consensus 51 ~~~~l~d~~~~tgd~-----------~y~~~a~~~~~~~~~~--~~~~~~~-----------~-----~~DD~a~~~la~ 101 (349)
T 3k7x_A 51 LVEVRLDAYLRTKKQ-----------ADLEVAEKTYLHNKNR--NGGTLIH-----------D-----FYDDMLWNALAA 101 (349)
T ss_dssp HHHHHHHHHHHHCCH-----------HHHHHHHHHHHHHHHH--TTSSSCC-----------S-----BHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCH-----------HHHHHHHHHHHHHHhc--CCCCCCc-----------c-----CccHHHHHHHHH
Confidence 469999999999998 7888888888766642 1111210 0 122445566889
Q ss_pred hHHHHhhCCchHHHHHHHHHHHH-HhccCC--CCCcceeeecCCCceecccccccCCCc-hhhhhHHHHHHhcCchHHHH
Q 008122 222 GALSRLTGDPIYESAALRALRRL-WSMRSS--LNLLGTTLDVTTGEWIEYSSGIGAGVD-SFYEYLFKAHILFGKEDFWR 297 (577)
Q Consensus 222 ~~LS~lTGd~kY~~~a~ra~~~L-~~~~~~--~gL~~~~id~~tG~~~~~~~~~Ga~~D-SyYEYLlK~~iL~g~~~~~~ 297 (577)
.++.++|||++|.+.|+++.+.+ ...-.. .|-+. .++.. +..+ ..+ +. -+..-+.+.+.++|++.|.+
T Consensus 102 ~~aye~t~~~~yL~~A~~l~~~l~~~~wd~~~gGGi~--W~~~~--~~~k-nai---sN~~~~~~la~l~~~tgd~~Yl~ 173 (349)
T 3k7x_A 102 YRLYKATGKSIYLEDAQLVWQDLVDTGWNDIMGGGFA--WRRPQ--MYYK-NTP---VNAPFIILSCWLYNELNETKYLE 173 (349)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHTBCSGGGSCBE--EETTE--EEEE-EHH---HHHHHHHHHHHHHHHHCCHHHHH
T ss_pred HHHHHHHCCchHHHHHHHHHHHHHHhCCCCCCCCceE--ecCCC--cccc-chh---hHHHHHHHHHHHHHHhCCHHHHH
Confidence 99999999999999999999998 332111 23222 22211 1110 111 11 36677889999999999988
Q ss_pred HHHHHHHHHHHHhhcCCCccccccCCCcceeccccccccccccchhhccccccchhhHHHHHHHHHHhCCCCcEEEccCc
Q 008122 298 MFHSAYLAVQKYFRHGPWYHEADMRNGKATYWQLTSLQAFWPGLQVLVGDIAAANSSHREFVHVWKKFGVLPERYLLDHL 377 (577)
Q Consensus 298 m~~~a~~~i~k~l~~~~~~~~~~~~~g~~~~~~~~hL~cF~pG~~~L~g~~~~a~~~~~~~~~~~~~~Gl~PE~~~~~~~ 377 (577)
.=.+.++-+.++|.... .... .|.. .+ -.| .... ....+|.+ +
T Consensus 174 ~A~~~~~w~~~~l~d~~-g~v~---Dg~~----~~-~~g----------~~~~--~~~~tYnq----------------g 216 (349)
T 3k7x_A 174 WAMKTYEWQTKVLVRED-GFVE---DGIN----RL-EDG----------TIDY--EWKFTYNQ----------------G 216 (349)
T ss_dssp HHHHHHHHHHHHHBCTT-SCBC---CEEC----TT-SSS----------CBCT--TCCCHHHH----------------H
T ss_pred HHHHHHHHHHhcCCCCC-CeEe---cCCc----cC-CCC----------ccCC--cCeeeHHH----------------H
Confidence 88888888888765432 1100 1100 00 001 1100 00001111 1
Q ss_pred cccCCCCcCCCChhhHHHHHHHHHhcCChhHHHHHHHHHHHHHhhcccCCCccccccccccc-cCCcchhH------HHH
Q 008122 378 MLHPTEKYYPLRPELAESTFYLYQATKDPWYLEVGESIVNSLNSYTKVDGGFASIRDVTTMQ-LEDHQHSF------FLA 450 (577)
Q Consensus 378 ~~~~~~~~Y~LRPE~iES~fyLyR~TgD~~Yre~gW~if~aiek~~r~~~Gya~i~dV~~~~-~~D~meSF------flA 450 (577)
-+|+.+=+|||+|||++|++.+-++.+++.++.- +.| |...+ -...|.|| +|+
T Consensus 217 -------------~~l~g~~~LY~~T~d~~yl~~a~~l~~~~~~~f~-~~g------i~~~~~~~~D~~sFkgi~~r~L~ 276 (349)
T 3k7x_A 217 -------------VYIGANLELYRITKEAIYLDTANKTAAISLKELT-EDG------IFKDEGNGGDEGLFKGIFYRYFT 276 (349)
T ss_dssp -------------HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHE-ETT------EECCCCSSSGGGGHHHHHHHHHH
T ss_pred -------------HHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHhc-cCC------cccCCCCCccHHHHHHHHHHHHH
Confidence 1889999999999999999999999999866644 333 21111 13557788 555
Q ss_pred HHhHH
Q 008122 451 ETCKY 455 (577)
Q Consensus 451 ETLKY 455 (577)
++.++
T Consensus 277 ~l~~~ 281 (349)
T 3k7x_A 277 DLIEE 281 (349)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55544
No 7
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=97.30 E-value=0.0049 Score=64.02 Aligned_cols=154 Identities=10% Similarity=0.021 Sum_probs=94.8
Q ss_pred hhhhhcccchhhhhc-cccchhhhccccchHHHHHHHHHHHhhhccCCCCCCCCccceeeccCCCCCCCCCCcccccccc
Q 008122 138 CNIRVLGGLVSAHIL-ATDSANRLVQGSYKNQLLTLAEDLGRRFLPAFDTPTGLPYAWINLKYGVMENETNETSTSGCGS 216 (577)
Q Consensus 138 TtIR~LGGLLSAY~L-s~d~~~~~~~~~y~~~LL~kA~dLadrLlpAFdTptGiP~~~vNl~~g~~~~~~~~t~lAe~GT 216 (577)
.|-|.|=.+.-||.+ ++++ .+++.|++..+.|+..+-.|.|--+..++. .|.+... ...+-.-+=
T Consensus 54 ~nar~i~~~a~a~~~~~~~~-----------~~~~~A~~~~~~l~~~~~~~~Gg~~~~~d~-dg~~~~~--~~~~~~~af 119 (388)
T 2gz6_A 54 LQNRQVWTFSMLCNQLEKRE-----------NWLKIARNGAKFLAQHGRDDEGNWYFALTR-GGEPLVQ--PYNIFSDCF 119 (388)
T ss_dssp HHHHHHHHHHHHHHHTCCCH-----------HHHHHHHHHHHHHHHHSBCTTSCBCSEECT-TSCBCCC--CCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCH-----------HHHHHHHHHHHHHHHhcCCCCCCEEEEEcC-CCCcccC--CcchHHHHH
Confidence 456777777888888 7887 899999999999999865555644555442 2322111 111223344
Q ss_pred chhhhhHHHHhhCCchHHHHHHHHHHHHHhcc-CCCCCcceeeecCCCceecccccccCCCchhhhhHHHHHHhcCchHH
Q 008122 217 LILEMGALSRLTGDPIYESAALRALRRLWSMR-SSLNLLGTTLDVTTGEWIEYSSGIGAGVDSFYEYLFKAHILFGKEDF 295 (577)
Q Consensus 217 l~LEF~~LS~lTGd~kY~~~a~ra~~~L~~~~-~~~gL~~~~id~~tG~~~~~~~~~Ga~~DSyYEYLlK~~iL~g~~~~ 295 (577)
+++-+..+.+.|||++|.+.|.++.+.|.+.- ...|++-...+... . . .+..+.+ -.-+-|+..|-++|++.|
T Consensus 120 ~i~al~~~y~~tg~~~~l~~A~~~~~~i~~~~~d~~g~~~~~~~~~~-~-~---~~~~~~~-~~~~all~l~~~t~d~~~ 193 (388)
T 2gz6_A 120 AAMAFSQYALASGEEWAKDVAMQAYNNVLRRKDNPKGKYTKTYPGTR-P-M---KALAVPM-ILANLTLEMEWLLPQETL 193 (388)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHTC--------------CC-C-C---EETHHHH-HHHHHHHHTGGGSCHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccCcccCCCC-C-C---CCCCHHH-HHHHHHHHHHHHcCCHHH
Confidence 56667788899999999999999999987643 22344322221110 0 0 1110001 245667888888999888
Q ss_pred HHHHHHHHHHHHHHhh
Q 008122 296 WRMFHSAYLAVQKYFR 311 (577)
Q Consensus 296 ~~m~~~a~~~i~k~l~ 311 (577)
++.-.+.++.+.+++.
T Consensus 194 ~~~A~~~~~~~~~~~~ 209 (388)
T 2gz6_A 194 ENVLAATVQEVMGDFL 209 (388)
T ss_dssp HHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8877777777777654
No 8
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=97.15 E-value=0.011 Score=62.44 Aligned_cols=249 Identities=14% Similarity=0.073 Sum_probs=138.1
Q ss_pred hhhhcccchhhhhccccchhhhccccchHHHHHHHHHHHhhhccCCCCCC-CCccceeeccCCCCCCCCCCccccccccc
Q 008122 139 NIRVLGGLVSAHILATDSANRLVQGSYKNQLLTLAEDLGRRFLPAFDTPT-GLPYAWINLKYGVMENETNETSTSGCGSL 217 (577)
Q Consensus 139 tIR~LGGLLSAY~Ls~d~~~~~~~~~y~~~LL~kA~dLadrLlpAFdTpt-GiP~~~vNl~~g~~~~~~~~t~lAe~GTl 217 (577)
|-|.|=++--||.+++++ .+|+.|+...+.|...+-.+. |--+..+ +.|.+.... ..+=.-.-+
T Consensus 54 n~r~i~~~a~a~~~~g~~-----------~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~--~dG~~~~~~--~~lyd~Af~ 118 (402)
T 3gt5_A 54 STRFVFNYAMAYLQFGTA-----------EYLDAVHHGLSYVRDVHRNPATGGYAWTL--CDDRVEDDT--NHCYGLAFV 118 (402)
T ss_dssp HHHHHHHHHHHHHHHCCH-----------HHHHHHHHHHHHHHHTTBCTTTSCBCSEE--ETTEEEECC--EEHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCh-----------HHHHHHHHHHHHHHHhCccCCCCcEEEEe--eCCCCCcCC--cchHHHHHH
Confidence 668888898999988887 899999999999887654343 4433333 555432111 011111112
Q ss_pred hhhhhHHHHhhCCchHHHHHHHHHHHHHhcc--CCCCCcceeeecCCCcee-cccccccCCCch---hhhhHHHHHHhcC
Q 008122 218 ILEMGALSRLTGDPIYESAALRALRRLWSMR--SSLNLLGTTLDVTTGEWI-EYSSGIGAGVDS---FYEYLFKAHILFG 291 (577)
Q Consensus 218 ~LEF~~LS~lTGd~kY~~~a~ra~~~L~~~~--~~~gL~~~~id~~tG~~~-~~~~~~Ga~~DS---yYEYLlK~~iL~g 291 (577)
++=+.. .+.|||+.|.+.|.++++.|.+.- ...|++-...++. |. ... .+..+ .-|-++..+-++|
T Consensus 119 i~al~~-~~~tgd~~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~---~~~~~~----~~~n~~m~l~eall~L~~~tg 190 (402)
T 3gt5_A 119 MLAYSC-GLKVGIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQ---WNFTRY----RGQNANMHMCEAMLAAYEASG 190 (402)
T ss_dssp HHHHHH-HHHTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTT---CCBCSC----EEHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHH-HHHhCChhHHHHHHHHHHHHHHHhcCCcCCCchhhhCCC---CCCCCC----CCCCHHHHHHHHHHHHHHhhC
Confidence 222333 345999999999999999987652 2345544333332 21 110 01112 5677888888899
Q ss_pred chHHHHHHHHHHHHHHHHhhcCCCccccccCCCcceeccccccccccccchhhccccccchhhHHHHHHHHHHhCCCCcE
Q 008122 292 KEDFWRMFHSAYLAVQKYFRHGPWYHEADMRNGKATYWQLTSLQAFWPGLQVLVGDIAAANSSHREFVHVWKKFGVLPER 371 (577)
Q Consensus 292 ~~~~~~m~~~a~~~i~k~l~~~~~~~~~~~~~g~~~~~~~~hL~cF~pG~~~L~g~~~~a~~~~~~~~~~~~~~Gl~PE~ 371 (577)
++.|.+.=.+.++.+.+++.... + |..+|.
T Consensus 191 d~~~~~~a~~l~~~~~~~f~~~~--------~------------------------------------------g~l~e~ 220 (402)
T 3gt5_A 191 EQRYLERALVLADRITRRQAAKA--------D------------------------------------------GLVWEH 220 (402)
T ss_dssp CHHHHHHHHHHHHHHHTHHHHTT--------T------------------------------------------TSCCSE
T ss_pred CHHHHHHHHHHHHHHHHHhhCcc--------C------------------------------------------CeeEEE
Confidence 88777766666666655543211 1 111222
Q ss_pred EEccCcc---ccCCCCcCCCCh------hhHHHHHHHHH---hcCChhHHHHHHHHHHHHHhhccc--CCCccccccccc
Q 008122 372 YLLDHLM---LHPTEKYYPLRP------ELAESTFYLYQ---ATKDPWYLEVGESIVNSLNSYTKV--DGGFASIRDVTT 437 (577)
Q Consensus 372 ~~~~~~~---~~~~~~~Y~LRP------E~iES~fyLyR---~TgD~~Yre~gW~if~aiek~~r~--~~Gya~i~dV~~ 437 (577)
|.-+-.. ....++..+.|| -.||..+.|.+ +|+|++|++.|-++++...++.-- .+|+---.|...
T Consensus 221 ~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~~~~~~~~~~~~A~~l~~~~~~~gwd~~~Gg~~~~~d~~g 300 (402)
T 3gt5_A 221 YDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEWLVPVARSLFDVAVARSWDAVRGGLCYGFAPDG 300 (402)
T ss_dssp ECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHCCCTTHHHHHHHHHHHHHHHHBCTTTCSBCSEECTTS
T ss_pred ECCCCCCccccccCCcccccCcCCCCCChHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhcccCCCCcEEEEEcCCC
Confidence 2110000 000011111121 36788777655 499999999999999988665433 245433333332
Q ss_pred cccCCcchhHHHHHHhHHHHHhc
Q 008122 438 MQLEDHQHSFFLAETCKYLYLLF 460 (577)
Q Consensus 438 ~~~~D~meSFflAETLKYLYLLF 460 (577)
....+...-..-+|.++=+..|+
T Consensus 301 ~~~~~~k~~W~qaEal~a~l~ly 323 (402)
T 3gt5_A 301 TICDDDKYFWVQAESLAAAALLA 323 (402)
T ss_dssp CEEECCEEHHHHHHHHHHHHHHH
T ss_pred CeeeCCcceeHHHHHHHHHHHHH
Confidence 22233333444577777554444
No 9
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=97.11 E-value=0.0043 Score=65.51 Aligned_cols=216 Identities=14% Similarity=0.028 Sum_probs=121.0
Q ss_pred hhcccchhhhhccccchhhhccccchHHHHHHHHHHHhhhccCC-CCCCCCccceeeccCCCCCCCCCCccccccccchh
Q 008122 141 RVLGGLVSAHILATDSANRLVQGSYKNQLLTLAEDLGRRFLPAF-DTPTGLPYAWINLKYGVMENETNETSTSGCGSLIL 219 (577)
Q Consensus 141 R~LGGLLSAY~Ls~d~~~~~~~~~y~~~LL~kA~dLadrLlpAF-dTptGiP~~~vNl~~g~~~~~~~~t~lAe~GTl~L 219 (577)
=++=||+. |..++++ ..|++|+++.+.|..-| |...|.-+...+......+. .+..-..-+..
T Consensus 117 f~i~al~~-~~~tgd~-----------~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~~~~~----~~~n~~m~l~e 180 (402)
T 3gt5_A 117 FVMLAYSC-GLKVGIK-----------QAREWMDETWCLLERHFWDAEYGLYKDEADAQWNFTRY----RGQNANMHMCE 180 (402)
T ss_dssp HHHHHHHH-HHHTTCT-----------THHHHHHHHHHHHHHHTEETTTTEECCEECTTCCBCSC----EEHHHHHHHHH
T ss_pred HHHHHHHH-HHHhCCh-----------hHHHHHHHHHHHHHHHhcCCcCCCchhhhCCCCCCCCC----CCCCHHHHHHH
Confidence 34556777 6678888 89999999999999887 44446543322211000000 00000011222
Q ss_pred hhhHHHHhhCCchHHHHHHHHHHHHHhc--cCCCCCcceeeecCCCceecccccccCCCch----------hhh---hHH
Q 008122 220 EMGALSRLTGDPIYESAALRALRRLWSM--RSSLNLLGTTLDVTTGEWIEYSSGIGAGVDS----------FYE---YLF 284 (577)
Q Consensus 220 EF~~LS~lTGd~kY~~~a~ra~~~L~~~--~~~~gL~~~~id~~tG~~~~~~~~~Ga~~DS----------yYE---YLl 284 (577)
=+.+|.++|||++|.+.|+++++.+... ....|.+..+++.+- +.. .....+...++ -.| .|+
T Consensus 181 all~L~~~tgd~~~~~~a~~l~~~~~~~f~~~~~g~l~e~~~~dw-~~~-~~~~~~~~~~~~~~~~~~pGH~iE~awlLl 258 (402)
T 3gt5_A 181 AMLAAYEASGEQRYLERALVLADRITRRQAAKADGLVWEHYDMRW-EVD-WDYNRDNPKHLFRPWGFQPGHQTEWAKLLL 258 (402)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHTHHHHTTTTSCCSEECTTS-CBC-TTTTTTSTTCSSSCSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCHHHHHHHHHHHHHHHHHhhCccCCeeEEEECCCC-CCc-cccccCCcccccCcCCCCCChHHHHHHHHH
Confidence 3788999999999999999999988653 234577777776431 110 00001111112 123 266
Q ss_pred HHHHhcCchHHHHHHHHHHHHHHHHhhcCCCccccccCCCcceeccccccccccccchhhccccccchhhHHHHHHHHHH
Q 008122 285 KAHILFGKEDFWRMFHSAYLAVQKYFRHGPWYHEADMRNGKATYWQLTSLQAFWPGLQVLVGDIAAANSSHREFVHVWKK 364 (577)
Q Consensus 285 K~~iL~g~~~~~~m~~~a~~~i~k~l~~~~~~~~~~~~~g~~~~~~~~hL~cF~pG~~~L~g~~~~a~~~~~~~~~~~~~ 364 (577)
..+.++|++.+.+.=.+.++.+.++-. |...|.+.+. ++ . .|.+....+ ..|
T Consensus 259 ~~~~~~~~~~~~~~A~~l~~~~~~~gw--------d~~~Gg~~~~-~d-----~------~g~~~~~~k------~~W-- 310 (402)
T 3gt5_A 259 ILDRYIEVEWLVPVARSLFDVAVARSW--------DAVRGGLCYG-FA-----P------DGTICDDDK------YFW-- 310 (402)
T ss_dssp HHHHHCCCTTHHHHHHHHHHHHHHHHB--------CTTTCSBCSE-EC-----T------TSCEEECCE------EHH--
T ss_pred HHHHhhCcHHHHHHHHHHHHHHHHhcc--------cCCCCcEEEE-Ec-----C------CCCeeeCCc------cee--
Confidence 777777877666555555444444421 1112221110 00 0 010000000 011
Q ss_pred hCCCCcEEEccCccccCCCCcCCCChhhHHHHHHHHHhcCChhHHHHHHHHHHHHHhhccc
Q 008122 365 FGVLPERYLLDHLMLHPTEKYYPLRPELAESTFYLYQATKDPWYLEVGESIVNSLNSYTKV 425 (577)
Q Consensus 365 ~Gl~PE~~~~~~~~~~~~~~~Y~LRPE~iES~fyLyR~TgD~~Yre~gW~if~aiek~~r~ 425 (577)
+ --|.|=.+..||++|||++|++++-++++-+.++..-
T Consensus 311 ----------------------~-qaEal~a~l~ly~~tgd~~yl~~a~~~~~~~~~~~~D 348 (402)
T 3gt5_A 311 ----------------------V-QAESLAAAALLATRSGDERYWQWYDRLWAYAWQHMVD 348 (402)
T ss_dssp ----------------------H-HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBC
T ss_pred ----------------------H-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcC
Confidence 1 1378888899999999999999999999988887765
No 10
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=97.10 E-value=0.00077 Score=70.52 Aligned_cols=141 Identities=9% Similarity=0.013 Sum_probs=92.1
Q ss_pred cchhhhhccccchhhhccccchHHHHHHHHHHHhhh-ccCCCCC--CCCccceeeccCCCCCCCCCCccccccccchhhh
Q 008122 145 GLVSAHILATDSANRLVQGSYKNQLLTLAEDLGRRF-LPAFDTP--TGLPYAWINLKYGVMENETNETSTSGCGSLILEM 221 (577)
Q Consensus 145 GLLSAY~Ls~d~~~~~~~~~y~~~LL~kA~dLadrL-lpAFdTp--tGiP~~~vNl~~g~~~~~~~~t~lAe~GTl~LEF 221 (577)
+++.||++++++ ..|++|+++.+.| ...||++ .||++.. .....++ + + .-|-+..=+
T Consensus 100 a~~~aye~t~~~-----------~yL~~A~~l~~~l~~~~wd~~~gGGi~W~~---~~~~~kn----a-i-sN~~~~~~l 159 (349)
T 3k7x_A 100 AAYRLYKATGKS-----------IYLEDAQLVWQDLVDTGWNDIMGGGFAWRR---PQMYYKN----T-P-VNAPFIILS 159 (349)
T ss_dssp HHHHHHHHHCCH-----------HHHHHHHHHHHHHHHHTBCSGGGSCBEEET---TEEEEEE----H-H-HHHHHHHHH
T ss_pred HHHHHHHHHCCc-----------hHHHHHHHHHHHHHHhCCCCCCCCceEecC---CCccccc----h-h-hHHHHHHHH
Confidence 899999999998 9999999999999 7899864 4564421 1000011 1 1 112223335
Q ss_pred hHHHHhhCCchHHHHHHHHHHHHHhc-cCCCCCcceeeecC-CC------ceecccccccCCCchhhhhHHHHHHhcCch
Q 008122 222 GALSRLTGDPIYESAALRALRRLWSM-RSSLNLLGTTLDVT-TG------EWIEYSSGIGAGVDSFYEYLFKAHILFGKE 293 (577)
Q Consensus 222 ~~LS~lTGd~kY~~~a~ra~~~L~~~-~~~~gL~~~~id~~-tG------~~~~~~~~~Ga~~DSyYEYLlK~~iL~g~~ 293 (577)
.+|+++|||++|.+.|+++++-+.+. ..+.|++-..++.. .| +|+-+. + -+.+=+.-.|-.+|++
T Consensus 160 a~l~~~tgd~~Yl~~A~~~~~w~~~~l~d~~g~v~Dg~~~~~~g~~~~~~~~tYnq-g------~~l~g~~~LY~~T~d~ 232 (349)
T 3k7x_A 160 CWLYNELNETKYLEWAMKTYEWQTKVLVREDGFVEDGINRLEDGTIDYEWKFTYNQ-G------VYIGANLELYRITKEA 232 (349)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHBCTTSCBCCEECTTSSSCBCTTCCCHHHH-H------HHHHHHHHHHHHHCCH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHhcCCCCCCeEecCCccCCCCccCCcCeeeHHH-H------HHHHHHHHHHHhhCcH
Confidence 68899999999999999999988652 22225553333321 11 121111 0 1445566677778999
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 008122 294 DFWRMFHSAYLAVQKYFRH 312 (577)
Q Consensus 294 ~~~~m~~~a~~~i~k~l~~ 312 (577)
.|++.-.+.++.+++++..
T Consensus 233 ~yl~~a~~l~~~~~~~f~~ 251 (349)
T 3k7x_A 233 IYLDTANKTAAISLKELTE 251 (349)
T ss_dssp HHHHHHHHHHHHHHHHHEE
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 9999888888888888653
No 11
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=97.06 E-value=0.0056 Score=65.31 Aligned_cols=207 Identities=17% Similarity=0.094 Sum_probs=124.3
Q ss_pred hhcccchhhhhccccchhhhccccchHHHHHHHHHHHhhhccCCCCCCCCccceeeccCCCCCCCCCCccccccccch-h
Q 008122 141 RVLGGLVSAHILATDSANRLVQGSYKNQLLTLAEDLGRRFLPAFDTPTGLPYAWINLKYGVMENETNETSTSGCGSLI-L 219 (577)
Q Consensus 141 R~LGGLLSAY~Ls~d~~~~~~~~~y~~~LL~kA~dLadrLlpAFdTptGiP~~~vNl~~g~~~~~~~~t~lAe~GTl~-L 219 (577)
=..|+|.-+|++|||+ .+++.|++-.++|.+..... +| +....+|=+. +
T Consensus 72 F~~G~lw~~ye~Tgd~-----------~~~~~a~~~~~~l~~~~~~~-------~~------------~~~HD~GF~~~~ 121 (397)
T 2zzr_A 72 FWTGCLWLAYEYNQDK-----------KLKNIAHKNVLSFLNRINNR-------IA------------LDHHDLGFLYTP 121 (397)
T ss_dssp HHHHHHHHHHHHHCCH-----------HHHHHHHHHHHHHHHHHHTT-------CS------------CCSSTHHHHHTT
T ss_pred hHHHHHHHHHHHHCCH-----------HHHHHHHHHHHHHHHhhhhc-------cc------------CCCCCchHHHHH
Confidence 3579999999999998 89999999888877644211 11 1112334222 3
Q ss_pred hhhHHHHhhCCchHHHHHHHHHHHHHhcc-CCCCCcceeeecCCCceecccccccCCCchhhhhHHHHHHhcCchHHHHH
Q 008122 220 EMGALSRLTGDPIYESAALRALRRLWSMR-SSLNLLGTTLDVTTGEWIEYSSGIGAGVDSFYEYLFKAHILFGKEDFWRM 298 (577)
Q Consensus 220 EF~~LS~lTGd~kY~~~a~ra~~~L~~~~-~~~gL~~~~id~~tG~~~~~~~~~Ga~~DSyYEYLlK~~iL~g~~~~~~m 298 (577)
=+..+-++|||++|.+.+.++-+.|...- ...|.+.. .+...+.+. ..+=|.... --+-|.+.+.++|+++|.++
T Consensus 122 s~~~~y~ltg~~~~~~~~~~aA~~L~~r~~~~~g~iqs-w~~~~~~~~-~~~iID~~m--ni~~L~~A~~~~gd~~y~~~ 197 (397)
T 2zzr_A 122 SCTAEYRINGDVKALEATIKAADKLMERYQEKGGFIQA-WGELGYKEH-YRLIIDCLL--NIQLLFFAYEQTGDEKYRQV 197 (397)
T ss_dssp THHHHHHHHCCHHHHHHHHHHHHHHHTTEETTTTEECC-SSSTTCGGG-CEEETTHHH--HTHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHhCcCCCEEEe-cccCCCCCC-CceeechHh--HHHHHHHHHHHhCCHHHHHH
Confidence 37779999999999999999999997653 33343322 221111111 111111111 23578888999999999998
Q ss_pred HHHHHHHHHHHhhcC--CCcccc--ccCCCcceeccccccccccccchhhccccccchhhHHHHHHHHHHhCCCCcEEEc
Q 008122 299 FHSAYLAVQKYFRHG--PWYHEA--DMRNGKATYWQLTSLQAFWPGLQVLVGDIAAANSSHREFVHVWKKFGVLPERYLL 374 (577)
Q Consensus 299 ~~~a~~~i~k~l~~~--~~~~~~--~~~~g~~~~~~~~hL~cF~pG~~~L~g~~~~a~~~~~~~~~~~~~~Gl~PE~~~~ 374 (577)
=.++.+-+.+++... ..++.. |..+|...+. .. .+ |..++. .-.-.+.|
T Consensus 198 A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~-~t-----~q------Gy~dds---~WaRGqAw------------ 250 (397)
T 2zzr_A 198 AVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKG-VT-----RQ------GYSDES---SWARGQAW------------ 250 (397)
T ss_dssp HHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEE-EC-----TT------SSSTTS---CBHHHHHH------------
T ss_pred HHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccC-Cc-----cc------ccCcch---hhHHHHHH------------
Confidence 888888888887542 222221 1123332110 00 00 111110 00001111
Q ss_pred cCccccCCCCcCCCChhhHHHHHHHHHhcCChhHHHHHHHHHHHHHhhccc
Q 008122 375 DHLMLHPTEKYYPLRPELAESTFYLYQATKDPWYLEVGESIVNSLNSYTKV 425 (577)
Q Consensus 375 ~~~~~~~~~~~Y~LRPE~iES~fyLyR~TgD~~Yre~gW~if~aiek~~r~ 425 (577)
+|..+-.+||.|+|++|++.|-++.+-+.++...
T Consensus 251 -----------------~i~gl~~lY~~T~d~~yL~~A~~la~~~l~~~~~ 284 (397)
T 2zzr_A 251 -----------------GIYGIPLSYRKMKDYQQIILFKGMTNYFLNRLPE 284 (397)
T ss_dssp -----------------HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTCCT
T ss_pred -----------------HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHH
Confidence 4555666899999999999999999999888743
No 12
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=96.86 E-value=0.0084 Score=63.45 Aligned_cols=153 Identities=19% Similarity=0.061 Sum_probs=99.7
Q ss_pred hhhcccchhhhhccccchhhhccccchHHHHHHHHHHHhhhccCCCCCCCCccceeeccCCCCCCCCCCccccccccch-
Q 008122 140 IRVLGGLVSAHILATDSANRLVQGSYKNQLLTLAEDLGRRFLPAFDTPTGLPYAWINLKYGVMENETNETSTSGCGSLI- 218 (577)
Q Consensus 140 IR~LGGLLSAY~Ls~d~~~~~~~~~y~~~LL~kA~dLadrLlpAFdTptGiP~~~vNl~~g~~~~~~~~t~lAe~GTl~- 218 (577)
-=..|+|.-+|++|||+ .+++.|++-.++|.+..+.... +...+.|=+.
T Consensus 45 GF~~g~lw~~ye~Tgd~-----------~~~~~a~~~~~~l~~~~~~~~~-------------------~~~HD~Gf~~~ 94 (377)
T 2ahf_A 45 GFWSGILWLCYEYTGDE-----------QYREGAVRTVASFRERLDRFEN-------------------LDHHNIGFLYS 94 (377)
T ss_dssp HHHHHHHHHHHHHHCCH-----------HHHHHHHHHHHHHHHHHTTTTT-------------------CCBSTHHHHHH
T ss_pred chHHHHHHHHHHHhCCH-----------HHHHHHHHHHHHHHHhhhcccC-------------------CCCCCchHhhH
Confidence 34679999999999998 8999999999888765532111 1123345433
Q ss_pred hhhhHHHHhhCCchHHHHHHHHHHHHHhccCC-CCCcceeeecCC-CceecccccccCCCchhhhhHHHHHHhcCchHHH
Q 008122 219 LEMGALSRLTGDPIYESAALRALRRLWSMRSS-LNLLGTTLDVTT-GEWIEYSSGIGAGVDSFYEYLFKAHILFGKEDFW 296 (577)
Q Consensus 219 LEF~~LS~lTGd~kY~~~a~ra~~~L~~~~~~-~gL~~~~id~~t-G~~~~~~~~~Ga~~DSyYEYLlK~~iL~g~~~~~ 296 (577)
+=+..+-++|||++|.+.+.++-+.|...-.+ .|.+.. .+... ..+. ...-|..+. --+-|.+.+.++|+++|.
T Consensus 95 ~s~~~~y~ltg~~~~~~~~~~aA~~L~~r~~~~~g~i~s-w~~~~~~~~~-~~~iID~mm--ni~~L~~A~~~~gd~~y~ 170 (377)
T 2ahf_A 95 LSAKAQWIVEKDESARKLALDAADVLMRRWRADAGIIQA-WGPKGDPENG-GRIIIDCLL--NLPLLLWAGEQTGDPEYR 170 (377)
T ss_dssp TTHHHHHHHHCCHHHHHHHHHHHHHHHTTEETTTTEECC-BSSTTCTTTT-TEEEGGGGG--GHHHHHHHHHHHCCTHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCCCCCeEEe-ccCCCCCCCC-ceEEechHH--HHHHHHHHHHHhCCHHHH
Confidence 45778999999999999999999998865332 243322 22100 0010 011111111 157789999999999999
Q ss_pred HHHHHHHHHHHHHhhc--CCCccc--cccCCCcc
Q 008122 297 RMFHSAYLAVQKYFRH--GPWYHE--ADMRNGKA 326 (577)
Q Consensus 297 ~m~~~a~~~i~k~l~~--~~~~~~--~~~~~g~~ 326 (577)
++=.++++-+.+++.+ +..++. .|..+|..
T Consensus 171 ~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~ 204 (377)
T 2ahf_A 171 RVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNA 204 (377)
T ss_dssp HHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCE
T ss_pred HHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCe
Confidence 9888888888888754 233332 33446765
No 13
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=96.79 E-value=0.022 Score=60.39 Aligned_cols=258 Identities=13% Similarity=0.062 Sum_probs=139.9
Q ss_pred eeeccchhhhccCHH---HHHHHHHHHHHhCCCcc-----------cccccc---cchhhhhcccchhhhhccccchhhh
Q 008122 98 LIESMSSLVIMGNNT---EFERAVLWLSENLNFDV-----------DARINL---FECNIRVLGGLVSAHILATDSANRL 160 (577)
Q Consensus 98 LVDSLDTL~IMGl~~---EF~~A~~~v~~~l~F~~-----------d~~Vsv---FETtIR~LGGLLSAY~Ls~d~~~~~ 160 (577)
+|=++-..+..|..+ --+++++++.+++ ++. ++.+.. -+.+.=++-+++. |.+++++
T Consensus 56 ~i~~~a~a~~~g~~~~l~~A~~~~~fl~~~~-~D~~~GG~~~s~d~dg~~~~~k~lyd~Af~i~al~~-~~~tg~~---- 129 (421)
T 2zbl_A 56 MLHVYSVAASMGRPGAYDLVDHGIKAMNGAL-RDKKYGGWYACVNDQGVVDASKQGYQHFFALLGAAS-AVTTGHP---- 129 (421)
T ss_dssp HHHHHHHHHHTTCTTHHHHHHHHHHHHTTTT-BCTTTSSBCSEEETTEEEECCEEHHHHHHHHHHHHH-HHTTTCT----
T ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHhc-cCcCCCeEEEEeCCCCCcCCchhHHHHHHHHHHHHH-HHHhCCc----
Confidence 444566666666532 2345667776653 232 122211 1223345557777 8999988
Q ss_pred ccccchHHHHHHHHHHHhhhccCCCCC-CCCccceeeccCCCCCCCCCCccccccccchhhhhHHHHhhCCchHHHHHHH
Q 008122 161 VQGSYKNQLLTLAEDLGRRFLPAFDTP-TGLPYAWINLKYGVMENETNETSTSGCGSLILEMGALSRLTGDPIYESAALR 239 (577)
Q Consensus 161 ~~~~y~~~LL~kA~dLadrLlpAFdTp-tGiP~~~vNl~~g~~~~~~~~t~lAe~GTl~LEF~~LS~lTGd~kY~~~a~r 239 (577)
..++.|+++.+.+..-|-.| .|.-+...+-...... .........-+..-+.+|.++|||++|.+.|++
T Consensus 130 -------~~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d~~~~~---~~~~~n~~m~~~~al~~l~~~tgd~~~~~~A~~ 199 (421)
T 2zbl_A 130 -------EARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTE---DYRGGNANMHAVEAFLIVYDVTHDKKWLDRALR 199 (421)
T ss_dssp -------THHHHHHHHHHHHHHHTEETTTTEECCEECTTSCSBC---SCEEHHHHHHHHHHHHHHHHTTCCTHHHHHHHH
T ss_pred -------cHHHHHHHHHHHHHHHhccCCCCCeeeeecCCCCccc---ccCCCcHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 78999999999998877434 6765554443211110 011111111235567889999999999999999
Q ss_pred HHHHHHhcc--CCCCCcceeeecCCCceeccc-ccccCCCchh------hh-------hHHHHHHhc---Cc--h-HHHH
Q 008122 240 ALRRLWSMR--SSLNLLGTTLDVTTGEWIEYS-SGIGAGVDSF------YE-------YLFKAHILF---GK--E-DFWR 297 (577)
Q Consensus 240 a~~~L~~~~--~~~gL~~~~id~~tG~~~~~~-~~~Ga~~DSy------YE-------YLlK~~iL~---g~--~-~~~~ 297 (577)
+++.+...- ...|.++.+++.. |.... ...+...+.+ |= -|++.+..+ |+ + ++.+
T Consensus 200 ~~~~~~~~~~~~~~~~l~~~f~~~---~~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~~~~~~~~~l~ 276 (421)
T 2zbl_A 200 IASVIIHDVARNGDYRVNEHFDSQ---WNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLE 276 (421)
T ss_dssp HHHHHCCCCCGGGTTCCCCEECTT---SCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHTTCCCCTHHHH
T ss_pred HHHHHHHHhccCCCCchhhhcCCc---cccchhccCCCcccccccCCCCCChHHHHHHHHHHHHHHcccccccchHHHHH
Confidence 999876532 1235556556542 22110 0012223333 11 245555555 33 3 4544
Q ss_pred HHHHHHHHHHHHhhcCCCccccccC-CCcceeccccccccccccchhhccccccchhhHHHHHHHHHHhCCCCcEEEccC
Q 008122 298 MFHSAYLAVQKYFRHGPWYHEADMR-NGKATYWQLTSLQAFWPGLQVLVGDIAAANSSHREFVHVWKKFGVLPERYLLDH 376 (577)
Q Consensus 298 m~~~a~~~i~k~l~~~~~~~~~~~~-~g~~~~~~~~hL~cF~pG~~~L~g~~~~a~~~~~~~~~~~~~~Gl~PE~~~~~~ 376 (577)
.=.+.++.+.++.. +.. .|...+. .+ . .|.+.. .+...++
T Consensus 277 ~A~~l~~~~~~~g~--------d~~~~GG~~~~-~~-----~------~g~~~~------------------~~k~~w~- 317 (421)
T 2zbl_A 277 DAKGLFHATIRDAW--------APDGADGFVYS-VD-----W------DGKPIV------------------RERVRWP- 317 (421)
T ss_dssp HHHHHHHHHHHHHB--------SCSSSSSBCSC-BC-----T------TSCBSC------------------CCEEHHH-
T ss_pred HHHHHHHHHHHHhc--------CCCCCCcEEEe-ec-----C------CCCccC------------------CCcccHH-
Confidence 44444444444321 111 1111110 00 0 000000 0111011
Q ss_pred ccccCCCCcCCCChhhHHHHHHHHHhcCChhHHHHHHHHHHHHHhhccc
Q 008122 377 LMLHPTEKYYPLRPELAESTFYLYQATKDPWYLEVGESIVNSLNSYTKV 425 (577)
Q Consensus 377 ~~~~~~~~~Y~LRPE~iES~fyLyR~TgD~~Yre~gW~if~aiek~~r~ 425 (577)
--|+|..+..||++|||++|++++-++++.+.++...
T Consensus 318 ------------~aea~~all~l~~~tgd~~yl~~a~~~~~~~~~~~~d 354 (421)
T 2zbl_A 318 ------------IVEAMGTAYALYTLTDDSQYEEWYQKWWDYCIKYLMD 354 (421)
T ss_dssp ------------HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBC
T ss_pred ------------HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCC
Confidence 2379999999999999999999999999999888775
No 14
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=96.76 E-value=0.0065 Score=63.07 Aligned_cols=157 Identities=13% Similarity=0.099 Sum_probs=93.3
Q ss_pred hhhhcccchhhhhccccchhhhccccchHHHHHHHHHHHhhhccCC-CCCCCCccceeeccCCCCCCCCCCccccccccc
Q 008122 139 NIRVLGGLVSAHILATDSANRLVQGSYKNQLLTLAEDLGRRFLPAF-DTPTGLPYAWINLKYGVMENETNETSTSGCGSL 217 (577)
Q Consensus 139 tIR~LGGLLSAY~Ls~d~~~~~~~~~y~~~LL~kA~dLadrLlpAF-dTptGiP~~~vNl~~g~~~~~~~~t~lAe~GTl 217 (577)
+.=.+-+||.+|.+++|+ .++++|+++++.+..-| +.++|.....++..-...+.... ..+..|.
T Consensus 174 ~~~~~~all~l~~~t~d~-----------~~~~~A~~~~~~~~~~~~~~~~g~~~e~~~~~w~~~~~~~~--~~~~pgh- 239 (388)
T 2gz6_A 174 PMILANLTLEMEWLLPQE-----------TLENVLAATVQEVMGDFLDQEQGLMYENVAPDGSHIDCFEG--RLINPGH- 239 (388)
T ss_dssp HHHHHHHHHHTGGGSCHH-----------HHHHHHHHHHHHHHHTTEETTTTEECSEECTTSCCCCSTTT--TEECHHH-
T ss_pred HHHHHHHHHHHHHHcCCH-----------HHHHHHHHHHHHHHHHHhccCCCeEEEEECCCCCCCCCccc--CcCCCCH-
Confidence 334455678889999887 89999999999999887 45666654444432111111101 1122221
Q ss_pred hhh----hhHHHHhhCCchHHHHHHHHHHHHHhc--cCCCCCcceeeecCCCceec----cc-ccccCCCchhhhhHHHH
Q 008122 218 ILE----MGALSRLTGDPIYESAALRALRRLWSM--RSSLNLLGTTLDVTTGEWIE----YS-SGIGAGVDSFYEYLFKA 286 (577)
Q Consensus 218 ~LE----F~~LS~lTGd~kY~~~a~ra~~~L~~~--~~~~gL~~~~id~~tG~~~~----~~-~~~Ga~~DSyYEYLlK~ 286 (577)
.+| +.+++++|||++|.+.|+++++.+.+. ....|-+-..++.+ |+... .. ..++ .+-+. --++..
T Consensus 240 ~~e~a~lL~~~~~~tgd~~~~~~A~~~~~~~~~~g~d~~~Gg~~~~~~~~-g~~~~~~~~~~~~~W~-qae~i-~a~~~l 316 (388)
T 2gz6_A 240 GIEAMWFIMDIARRKNDSKTINQAVDVVLNILNFAWDNEYGGLYYFMDAA-GHPPQQLEWDQKLWWV-HLESL-VALAMG 316 (388)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHBCTTTCSBCSCEETT-SCCCSCTTTTCEEHHH-HHHHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhccCCCCCEEEeecCC-CCccccCcCCCcCcHH-HHHHH-HHHHHH
Confidence 123 457789999999999999999988653 22223222223332 22221 00 0010 00011 124567
Q ss_pred HHhcCchHHHHHHHHHHHHHHHHhhc
Q 008122 287 HILFGKEDFWRMFHSAYLAVQKYFRH 312 (577)
Q Consensus 287 ~iL~g~~~~~~m~~~a~~~i~k~l~~ 312 (577)
|..+|++.|++.+.+..+-+.+|+..
T Consensus 317 y~~tgd~~yl~~a~~~~~~~~~~~~D 342 (388)
T 2gz6_A 317 YRLTGRDACWAWYQKMHDYSWQHFAD 342 (388)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHBC
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhCcC
Confidence 88899999999999999988888753
No 15
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=96.58 E-value=0.055 Score=56.63 Aligned_cols=167 Identities=13% Similarity=0.095 Sum_probs=96.2
Q ss_pred hhhccCHHHHHHHHHHHHHhCCCcccccccccc-hhhhhcccchhhhhccccchhhhccccchHHHHHHHHHHHhhhccC
Q 008122 105 LVIMGNNTEFERAVLWLSENLNFDVDARINLFE-CNIRVLGGLVSAHILATDSANRLVQGSYKNQLLTLAEDLGRRFLPA 183 (577)
Q Consensus 105 L~IMGl~~EF~~A~~~v~~~l~F~~d~~VsvFE-TtIR~LGGLLSAY~Ls~d~~~~~~~~~y~~~LL~kA~dLadrLlpA 183 (577)
|.||....--++..+++.++-.=..+....-.+ |+-=+++||+-+|++++|+ .+++.|++.++.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~w~~G~~~~gl~~~y~~tgd~-----------~y~~~a~~~~~~~~~- 75 (373)
T 1nc5_A 8 IAVKSPLTYAEALANTIMNTYTVEELPPANRWHYHQGVFLCGVLRLWEATGEK-----------RYFEYAKAYADLLID- 75 (373)
T ss_dssp ---CCHHHHHHHHHHHHHHHCCTTTSSSTTCCCHHHHHHHHHHHHHHHHHCCH-----------HHHHHHHHHHHHHBC-
T ss_pred HHhhchHHHHHHHHHHHHHhCCCcccCCCCCcchhHHHHHHHHHHHHHHhCCH-----------HHHHHHHHHHHHHhC-
Confidence 445554444456666665532100111001111 3455799999999999998 899999999999862
Q ss_pred CCCCCCCccceeeccCCCCCCCCCCccccccccchhhhhHHHHhhCCchHHHHHHHHHHHHHhcc-CCCC-CcceeeecC
Q 008122 184 FDTPTGLPYAWINLKYGVMENETNETSTSGCGSLILEMGALSRLTGDPIYESAALRALRRLWSMR-SSLN-LLGTTLDVT 261 (577)
Q Consensus 184 FdTptGiP~~~vNl~~g~~~~~~~~t~lAe~GTl~LEF~~LS~lTGd~kY~~~a~ra~~~L~~~~-~~~g-L~~~~id~~ 261 (577)
+.|-+. .+.+.. .. .+ +| .=+..|.++|||++|.+.|.++.+.|.... ...| .+....++.
T Consensus 76 ---~~g~l~----~~~~~l-----Dd-~~-~g---~~ll~lY~~Tgd~~yl~~a~~la~~l~~~~r~~~G~fw~~~~~~~ 138 (373)
T 1nc5_A 76 ---DNGNLL----FRRDEL-----DA-IQ-AG---LILFPLYEQTKDERYVKAAKRLRSLYGTLNRTSEGGFWHKDGYPY 138 (373)
T ss_dssp ---TTCCBC----CCTTCG-----GG-TG-GG---GGHHHHHHHHCCHHHHHHHHHHHGGGGTSCBCTTSCBCSCTTSTT
T ss_pred ---CCCccc----CCCCCc-----ch-HH-HH---HHHHHHHHHhCCHHHHHHHHHHHHHHHhccCCCCCCeeccCCCCC
Confidence 223211 111211 11 11 33 335677899999999999999888885432 2222 221111100
Q ss_pred CCceecccccccCCCchh---hhhHHHHHHhcCchHHHHHHHHHHHHHHHHhh
Q 008122 262 TGEWIEYSSGIGAGVDSF---YEYLFKAHILFGKEDFWRMFHSAYLAVQKYFR 311 (577)
Q Consensus 262 tG~~~~~~~~~Ga~~DSy---YEYLlK~~iL~g~~~~~~m~~~a~~~i~k~l~ 311 (577)
-.| .|.- -..|.+.+.++|+++|.+.=.+.+....+++.
T Consensus 139 -~~w----------~D~l~m~~p~L~~l~~~tgd~~y~d~A~~~~~~~~~~l~ 180 (373)
T 1nc5_A 139 -QMW----------LDGLYMGGPFALKYANLKQETELFDQVVLQESLMRKHTK 180 (373)
T ss_dssp -EEE----------THHHHHHHHHHHHHHHHHTCTHHHHHHHHHHHHHHHHHB
T ss_pred -eEE----------eCcHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhc
Confidence 012 2332 35789999999999987776666777777764
No 16
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=96.51 E-value=0.0075 Score=63.23 Aligned_cols=181 Identities=12% Similarity=0.026 Sum_probs=98.4
Q ss_pred hccCHHHHHHHHHHHHHhCCCccccccc----ccchhhhhcccchhhhhccccchhhhccccchHHHHHHHHHHHhhhcc
Q 008122 107 IMGNNTEFERAVLWLSENLNFDVDARIN----LFECNIRVLGGLVSAHILATDSANRLVQGSYKNQLLTLAEDLGRRFLP 182 (577)
Q Consensus 107 IMGl~~EF~~A~~~v~~~l~F~~d~~Vs----vFETtIR~LGGLLSAY~Ls~d~~~~~~~~~y~~~LL~kA~dLadrLlp 182 (577)
+.|..+-.+.|.+++..-+ +.++.+. ..+. +.+.=+|+.+|.+++|+ .+++.|+++++.|..
T Consensus 56 ~tgd~~y~~~a~~~~~~~~--~~~g~l~~~~~~lDd-~~~g~~ll~lY~~Tgd~-----------~yl~~a~~la~~l~~ 121 (373)
T 1nc5_A 56 ATGEKRYFEYAKAYADLLI--DDNGNLLFRRDELDA-IQAGLILFPLYEQTKDE-----------RYVKAAKRLRSLYGT 121 (373)
T ss_dssp HHCCHHHHHHHHHHHHHHB--CTTCCBCCCTTCGGG-TGGGGGHHHHHHHHCCH-----------HHHHHHHHHHGGGGT
T ss_pred HhCCHHHHHHHHHHHHHHh--CCCCcccCCCCCcch-HHHHHHHHHHHHHhCCH-----------HHHHHHHHHHHHHHh
Confidence 3355554455666664322 2223221 0111 22334688899999998 899999999999998
Q ss_pred CCCCCCCCccceeeccCCCCCCCCCCccccccccchhh-hhHHHHhhCCchHHHHHHHHHHHHHhc-c-CCCCCcceeee
Q 008122 183 AFDTPTGLPYAWINLKYGVMENETNETSTSGCGSLILE-MGALSRLTGDPIYESAALRALRRLWSM-R-SSLNLLGTTLD 259 (577)
Q Consensus 183 AFdTptGiP~~~vNl~~g~~~~~~~~t~lAe~GTl~LE-F~~LS~lTGd~kY~~~a~ra~~~L~~~-~-~~~gL~~~~id 259 (577)
.|+++.|--+.. .+ .+ .......--+.++ +.+|+++|||++|.+.|.+.++...+. . ...||+-...+
T Consensus 122 ~~r~~~G~fw~~----~~-~~----~~~w~D~l~m~~p~L~~l~~~tgd~~y~d~A~~~~~~~~~~l~D~~tGl~~h~~~ 192 (373)
T 1nc5_A 122 LNRTSEGGFWHK----DG-YP----YQMWLDGLYMGGPFALKYANLKQETELFDQVVLQESLMRKHTKDAKTGLFYHAWD 192 (373)
T ss_dssp SCBCTTSCBCSC----TT-ST----TEEETHHHHHHHHHHHHHHHHHTCTHHHHHHHHHHHHHHHHHBCTTTSCBCSEEE
T ss_pred ccCCCCCCeecc----CC-CC----CeEEeCcHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhcCCCCCCEEeecC
Confidence 888777654321 11 01 1111111112233 468999999999999999988877653 2 34677655455
Q ss_pred cCCCc-eecccc----cccCCCchhhhh-HHHHHHhc-----CchHHHHHHHHHHHHHHHHh
Q 008122 260 VTTGE-WIEYSS----GIGAGVDSFYEY-LFKAHILF-----GKEDFWRMFHSAYLAVQKYF 310 (577)
Q Consensus 260 ~~tG~-~~~~~~----~~Ga~~DSyYEY-LlK~~iL~-----g~~~~~~m~~~a~~~i~k~l 310 (577)
.+... |.+... .+=+.+...+=| |...+-.+ ++++|.+.+++.++++.++.
T Consensus 193 ~~~~~~w~d~~tg~~~~~WaRg~gW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~a~~l~~~q 254 (373)
T 1nc5_A 193 EAKKMPWANEETGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSICRYQ 254 (373)
T ss_dssp TTCCSTTSCTTTCBCSCCBHHHHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHHHTTS
T ss_pred CccccccccccCCCCCCcccchHhHHHHHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHhc
Confidence 43211 211100 111122222222 22233222 23457777777777777764
No 17
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=96.28 E-value=0.02 Score=60.99 Aligned_cols=152 Identities=13% Similarity=0.067 Sum_probs=88.8
Q ss_pred hhcccchhhhhccccchhhhccccchHHHHHHHHHHHhhhccCCCCCCCCccceeeccCCCCCCCCCCccccccccchh-
Q 008122 141 RVLGGLVSAHILATDSANRLVQGSYKNQLLTLAEDLGRRFLPAFDTPTGLPYAWINLKYGVMENETNETSTSGCGSLIL- 219 (577)
Q Consensus 141 R~LGGLLSAY~Ls~d~~~~~~~~~y~~~LL~kA~dLadrLlpAFdTptGiP~~~vNl~~g~~~~~~~~t~lAe~GTl~L- 219 (577)
-+.=++..+|.|+|++ ..++.|.+-|+.|+.-|++..|.-..+-.... . +. ... +-..- +.+
T Consensus 118 ~~~~s~~~~y~ltg~~-----------~~~~~~~~aA~~L~~r~~~~~g~iqsw~~~~~--~-~~-~~~-iID~~-mni~ 180 (397)
T 2zzr_A 118 LYTPSCTAEYRINGDV-----------KALEATIKAADKLMERYQEKGGFIQAWGELGY--K-EH-YRL-IIDCL-LNIQ 180 (397)
T ss_dssp HHTTTHHHHHHHHCCH-----------HHHHHHHHHHHHHHTTEETTTTEECCSSSTTC--G-GG-CEE-ETTHH-HHTH
T ss_pred HHHHHHHHHHHHhCCH-----------HHHHHHHHHHHHHHHHhCcCCCEEEecccCCC--C-CC-Cce-eechH-hHHH
Confidence 3444677799999998 67777777788888888766665544421111 0 00 000 00100 112
Q ss_pred hhhHHHHhhCCchHHHHHHHHHHHHHhccC-CCC-Cc-ceeeecCCCceecccccccCCCchh-----hhh----HHHHH
Q 008122 220 EMGALSRLTGDPIYESAALRALRRLWSMRS-SLN-LL-GTTLDVTTGEWIEYSSGIGAGVDSF-----YEY----LFKAH 287 (577)
Q Consensus 220 EF~~LS~lTGd~kY~~~a~ra~~~L~~~~~-~~g-L~-~~~id~~tG~~~~~~~~~Ga~~DSy-----YEY----LlK~~ 287 (577)
=+..-+++||||+|.+.|.+..+.+.+.-- ..| ++ -...|+.+|++..... .-+..|.+ +-+ |+-.|
T Consensus 181 ~L~~A~~~~gd~~y~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~~t-~qGy~dds~WaRGqAw~i~gl~~lY 259 (397)
T 2zzr_A 181 LLFFAYEQTGDEKYRQVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKGVT-RQGYSDESSWARGQAWGIYGIPLSY 259 (397)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEEEC-TTSSSTTSCBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccCCc-ccccCcchhhHHHHHHHHHHHHHHH
Confidence 233457999999999999988887765421 122 33 2346788998864322 22333332 233 34446
Q ss_pred HhcCchHHHHHHHHHHHHHHHHh
Q 008122 288 ILFGKEDFWRMFHSAYLAVQKYF 310 (577)
Q Consensus 288 iL~g~~~~~~m~~~a~~~i~k~l 310 (577)
..+++++|++.-.+..+-+.+++
T Consensus 260 ~~T~d~~yL~~A~~la~~~l~~~ 282 (397)
T 2zzr_A 260 RKMKDYQQIILFKGMTNYFLNRL 282 (397)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHTC
T ss_pred HHHCCHHHHHHHHHHHHHHHHhh
Confidence 66888887777766666666654
No 18
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=96.24 E-value=0.019 Score=60.57 Aligned_cols=180 Identities=9% Similarity=0.022 Sum_probs=98.3
Q ss_pred cCHHHHHHHHHHHHHhCCCcccccccccchhhhhcccchhhhhccccchhhhccccchHHHHHHHHHHHhhhccCC-CCC
Q 008122 109 GNNTEFERAVLWLSENLNFDVDARINLFECNIRVLGGLVSAHILATDSANRLVQGSYKNQLLTLAEDLGRRFLPAF-DTP 187 (577)
Q Consensus 109 Gl~~EF~~A~~~v~~~l~F~~d~~VsvFETtIR~LGGLLSAY~Ls~d~~~~~~~~~y~~~LL~kA~dLadrLlpAF-dTp 187 (577)
|..+-++.|.+|+...+ +.++.+.-.+ ++.....|+-+|.+++|+ .+++.|.++++.|+.-| +++
T Consensus 85 gd~~y~~~a~~~~~~~~--~~~~~~~n~D-~~~~~~~l~~lY~~Tgd~-----------~Yl~~a~~~ad~L~~~~~r~~ 150 (382)
T 3pmm_A 85 GDIEMRDIIDRWFADRF--AEGATTKNVN-TMAPFLTLAYRFEETGRM-----------AYLPWLESWAEWAMHEMPRTE 150 (382)
T ss_dssp CCHHHHHHHHHHHHHHH--HHCCCCCCTT-TTTTHHHHHHHHHHHCCG-----------GGHHHHHHHHHHHHHTSCBCG
T ss_pred CCHHHHHHHHHHHHHHH--cCCCCcCccc-chHHHHHHHHHHHHhCCH-----------HHHHHHHHHHHHHHhhCCCCc
Confidence 45555566667775433 2222211011 124445789999999998 88999999999998654 466
Q ss_pred CCCccceeeccCCCCCCCCCCccccccccchhhh-hHHHHhhCCchHHHHHHHHHHHHHhc-c-CCCCCcceeeecCCCc
Q 008122 188 TGLPYAWINLKYGVMENETNETSTSGCGSLILEM-GALSRLTGDPIYESAALRALRRLWSM-R-SSLNLLGTTLDVTTGE 264 (577)
Q Consensus 188 tGiP~~~vNl~~g~~~~~~~~t~lAe~GTl~LEF-~~LS~lTGd~kY~~~a~ra~~~L~~~-~-~~~gL~~~~id~~tG~ 264 (577)
.|--..... + ...........--+.++| ..++++|||++|.+.|.+-++..++. . ...||+-.-.+...+.
T Consensus 151 ~Ggf~~~~~---~---~~~~~~~WiDgl~M~~p~La~~~~~tgd~~y~d~A~~q~~~~~~~l~D~~tGl~~h~~~~~~~~ 224 (382)
T 3pmm_A 151 QGGMQHMTL---A---EENHQQMWDDTLMMTVLPLAKIGKLLNRPQYVEEATYQFLLHVQNLMDRETGLWFHGWNYEGRH 224 (382)
T ss_dssp GGCBCCCCS---S---CCCTTEEETTHHHHTHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHBCTTTSCBCSEEETTTTB
T ss_pred CCCeeeecC---C---CCCCCcEEecchhhhHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHccCCCCCCeeeeccCCCCC
Confidence 654332210 0 001111222222345555 67999999999999987766666553 2 2456655444433221
Q ss_pred eeccccccc-------CCCchhhhhH--HHHHHhcCchHHHHHHHHHHHHHHHHhh
Q 008122 265 WIEYSSGIG-------AGVDSFYEYL--FKAHILFGKEDFWRMFHSAYLAVQKYFR 311 (577)
Q Consensus 265 ~~~~~~~~G-------a~~DSyYEYL--lK~~iL~g~~~~~~m~~~a~~~i~k~l~ 311 (577)
.. ..+.|+ .+.--.||+| .+.+ .+++++.+.+.+.++++.++..
T Consensus 225 ~~-~~~~WaRG~gW~~~gl~~~l~~l~~p~~~--~~~~~~~~~~~~~a~~~~~~q~ 277 (382)
T 3pmm_A 225 NF-ARARWARGNSWLTMVIPDFLELVDLPEGN--AVRRYLITVLDAQIAALAECQD 277 (382)
T ss_dssp CT-TCCCBHHHHHHHHHHHHHHHHHHCCCTTC--HHHHHHHHHHHHHHHHHHHHCC
T ss_pred CC-CcceecccccHHHHHHHHHHHhhcCCcch--hhHHHHHHHHHHHHHHHHHcCC
Confidence 11 111121 1111223432 1110 2234688888888888888854
No 19
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=96.18 E-value=0.027 Score=59.60 Aligned_cols=153 Identities=15% Similarity=0.063 Sum_probs=87.5
Q ss_pred hhcccchhhhhccccchhhhccccchHHHHHHHHHHHhhhccCCCCCCCCccceeeccCCCCCCCCCCccccccccch-h
Q 008122 141 RVLGGLVSAHILATDSANRLVQGSYKNQLLTLAEDLGRRFLPAFDTPTGLPYAWINLKYGVMENETNETSTSGCGSLI-L 219 (577)
Q Consensus 141 R~LGGLLSAY~Ls~d~~~~~~~~~y~~~LL~kA~dLadrLlpAFdTptGiP~~~vNl~~g~~~~~~~~t~lAe~GTl~-L 219 (577)
=+.-++..+|.|+||+ .+++.|++-|+.|+.-|+...|.-..+-.+. . +....... +=+|. |
T Consensus 92 ~~~~s~~~~y~ltg~~-----------~~~~~~~~aA~~L~~r~~~~~g~i~sw~~~~--~-~~~~~~~i---ID~mmni 154 (377)
T 2ahf_A 92 LYSLSAKAQWIVEKDE-----------SARKLALDAADVLMRRWRADAGIIQAWGPKG--D-PENGGRII---IDCLLNL 154 (377)
T ss_dssp HHHTTHHHHHHHHCCH-----------HHHHHHHHHHHHHHTTEETTTTEECCBSSTT--C-TTTTTEEE---GGGGGGH
T ss_pred hhHHHHHHHHHHhCCH-----------HHHHHHHHHHHHHHHhCCCCCCeEEeccCCC--C-CCCCceEE---echHHHH
Confidence 3445677799999998 6666677777777777774334433332110 0 01010111 11111 2
Q ss_pred h-hhHHHHhhCCchHHHHHHHHHHHHHhccC-CCC-Cc-ceeeecCCCceecccccccCCCch--------hhhhHHHHH
Q 008122 220 E-MGALSRLTGDPIYESAALRALRRLWSMRS-SLN-LL-GTTLDVTTGEWIEYSSGIGAGVDS--------FYEYLFKAH 287 (577)
Q Consensus 220 E-F~~LS~lTGd~kY~~~a~ra~~~L~~~~~-~~g-L~-~~~id~~tG~~~~~~~~~Ga~~DS--------yYEYLlK~~ 287 (577)
+ +...+++||||+|.+.|.+..+.+.+.-- ..| ++ -...|+.+|++..+...-|-.-|| +-.-|+-.|
T Consensus 155 ~~L~~A~~~~gd~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly 234 (377)
T 2ahf_A 155 PLLLWAGEQTGDPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNS 234 (377)
T ss_dssp HHHHHHHHHHCCTHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHH
Confidence 2 44566999999999999998888766421 122 32 345789999886443322333332 123345556
Q ss_pred HhcCchHHHHHHHHHHHHHHHHh
Q 008122 288 ILFGKEDFWRMFHSAYLAVQKYF 310 (577)
Q Consensus 288 iL~g~~~~~~m~~~a~~~i~k~l 310 (577)
-.+++++|++...+..+-+.+++
T Consensus 235 ~~T~d~~yL~~A~~la~~~l~~~ 257 (377)
T 2ahf_A 235 RYLGNADLLETAKRMARHFLARV 257 (377)
T ss_dssp HHHTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHCChHHHHHHHHHHHHHHHhh
Confidence 66788877766666655555553
No 20
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=95.18 E-value=0.099 Score=56.94 Aligned_cols=166 Identities=14% Similarity=0.067 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHhCCCcc---cc-----------cccccchhhhhcccchhhhhccccchhhhccccchHHHHHHHHHHH
Q 008122 112 TEFERAVLWLSENLNFDV---DA-----------RINLFECNIRVLGGLVSAHILATDSANRLVQGSYKNQLLTLAEDLG 177 (577)
Q Consensus 112 ~EF~~A~~~v~~~l~F~~---d~-----------~VsvFETtIR~LGGLLSAY~Ls~d~~~~~~~~~y~~~LL~kA~dLa 177 (577)
+-|++|++-|.+++-+.. .. ....++----++||+++- .++.. -+...++.|++|+
T Consensus 254 ~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~aL---gg~~~-------~~~~~~~~a~~l~ 323 (475)
T 2ri9_A 254 DRWVLAAESTIKHLKSHPKSRPDLTFLSSYSNRNYDLSSQHLTCFDGGSFLL---GGTVL-------DRQDFIDFGLELV 323 (475)
T ss_dssp HHHHHHHHHHHHHTEECCSSCTTCCEECEEETTEEECEEETGGGGHHHHHHH---HHHHH-------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchHHHhHHHHHHh---ccccc-------ccHHHHHHHHHHH
Confidence 567889998888876543 11 112233344566776542 11110 0126788888888
Q ss_pred hhhccCCC-CCCCCccceeeccCCCCCCCC------CCccccccccch--hhh----hHHHHhhCCchHHHHHHHHHHHH
Q 008122 178 RRFLPAFD-TPTGLPYAWINLKYGVMENET------NETSTSGCGSLI--LEM----GALSRLTGDPIYESAALRALRRL 244 (577)
Q Consensus 178 drLlpAFd-TptGiP~~~vNl~~g~~~~~~------~~t~lAe~GTl~--LEF----~~LS~lTGd~kY~~~a~ra~~~L 244 (577)
+--.-+++ ||+|+.--.+++..+..+... ....... +... -|+ -+|-|+||||+|.+.+-++++.|
T Consensus 324 ~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~g~~~~~-~~y~LRPE~iES~fylyR~TgD~~yr~~gw~~f~ai 402 (475)
T 2ri9_A 324 DGCEATYNSTLTKIGPDSWGWDPKKVPSDQKEFYEKAGFYISS-GSYVLRPEVIESFYYAHRVTGKEIYRDWVWNAFVAI 402 (475)
T ss_dssp HHHHHHHHTSSSSCCCSEEECCTTCCCGGGHHHHHHHSCEEEE-CCBCSCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCcEEEeecCcccccccccccCCCceecc-cccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 88777775 799986556666443211100 0000011 1121 243 36999999999999999999999
Q ss_pred HhccC-CCCCcceeeecCCCceecccccccCCCchhh--hhHHHHHHhcCch
Q 008122 245 WSMRS-SLNLLGTTLDVTTGEWIEYSSGIGAGVDSFY--EYLFKAHILFGKE 293 (577)
Q Consensus 245 ~~~~~-~~gL~~~~id~~tG~~~~~~~~~Ga~~DSyY--EYLlK~~iL~g~~ 293 (577)
-+.-. ..| +...-|+.+.. .....-...||+ |-|-=.|+|+.++
T Consensus 403 ~k~~rt~~G-~a~i~dV~~~~----~~~~~D~meSF~laETLKYlYLLFsd~ 449 (475)
T 2ri9_A 403 NSTCRTDSG-FAAVSDVNKAN----GGSKYDNQESFLFAEVMKYSYLAHSED 449 (475)
T ss_dssp HHHTBCSSS-BCCBSCTTSGG----GSSBBSCCCTHHHHTHHHHHHHTTSCC
T ss_pred HHHHccccC-CcccccccCCC----CCCcCCccchHHHHHHHHHHHhcccCC
Confidence 87633 333 33334555411 011223456776 5443347777653
No 21
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=94.85 E-value=0.029 Score=58.62 Aligned_cols=213 Identities=13% Similarity=0.127 Sum_probs=122.9
Q ss_pred hhhhcccchhhhhccccchhhhccccchHHHHHHHHHHHhhhccCCC-CCCCCccceeeccCCCCCCCCCCcccccccc-
Q 008122 139 NIRVLGGLVSAHILATDSANRLVQGSYKNQLLTLAEDLGRRFLPAFD-TPTGLPYAWINLKYGVMENETNETSTSGCGS- 216 (577)
Q Consensus 139 tIR~LGGLLSAY~Ls~d~~~~~~~~~y~~~LL~kA~dLadrLlpAFd-TptGiP~~~vNl~~g~~~~~~~~t~lAe~GT- 216 (577)
..=++-+++.+|..|+++ ..++.|+++.+.++.-|. .+.|.- +-. ..... ..-..++
T Consensus 124 ~af~~~a~~~~~~atgd~-----------~~~~~A~~l~~~~~~~~~d~~~G~f----~~~---~~~~~---~~~~~~~~ 182 (402)
T 1fp3_A 124 ECFYTMAMNELWRVTAEA-----------RYQSEAVDMMDQIVHWVREDPSGLG----RPQ---LPGAV---ASESMAVP 182 (402)
T ss_dssp HHHHHHHHHHHHHHHCCH-----------HHHHHHHHHHHHHHHHHHTCGGGGC----CCC---CTTSC---CEEETHHH
T ss_pred HHHHHHHHHHHHHHhCCH-----------HHHHHHHHHHHHHHHHhccCCCccc----Ccc---ccCcc---CCCCcchH
Confidence 445677899999999988 899999999999998885 566631 110 00100 0111121
Q ss_pred -chhh-hhH---HHHhhCCchHHHHHHHHHHHHHhc-cCCCCCcceeeecCCCceeccccc----ccCCCchhhh---hH
Q 008122 217 -LILE-MGA---LSRLTGDPIYESAALRALRRLWSM-RSSLNLLGTTLDVTTGEWIEYSSG----IGAGVDSFYE---YL 283 (577)
Q Consensus 217 -l~LE-F~~---LS~lTGd~kY~~~a~ra~~~L~~~-~~~~gL~~~~id~~tG~~~~~~~~----~Ga~~DSyYE---YL 283 (577)
..+| +.. |..+|+++ |.+.++++++.+... ....|.+..++|. .|...... +-.|-| .| -|
T Consensus 183 m~~~~~~l~l~~l~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~e~~d~---dw~~~~~~~g~~~~pgh~--ie~~wlL 256 (402)
T 1fp3_A 183 MMLLCLVEQLGEEDEELAGR-YAQLGHWCARRILQHVQRDGQAVLENVSE---DGEELSGCLGRHQNPGHA--LEAGWFL 256 (402)
T ss_dssp HHHHHHHHHHHTTCHHHHHH-THHHHHHHHHHHHTTEETTTTEECSEEET---TSCBCCHHHHHEECHHHH--HHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCcH-HHHHHHHHHHHHHHHhCcCCCeEEEEECC---CCCccCCCCCCCCCCCcH--HHHHHHH
Confidence 1222 223 55778665 888888888877654 1234666667764 23211000 101111 34 58
Q ss_pred HHHHHhcCchHHHHHHHHHHHHH-HHHhhcCCCccccccCCCcceeccccccccccccchhhccccccchhhHHHHHHHH
Q 008122 284 FKAHILFGKEDFWRMFHSAYLAV-QKYFRHGPWYHEADMRNGKATYWQLTSLQAFWPGLQVLVGDIAAANSSHREFVHVW 362 (577)
Q Consensus 284 lK~~iL~g~~~~~~m~~~a~~~i-~k~l~~~~~~~~~~~~~g~~~~~~~~hL~cF~pG~~~L~g~~~~a~~~~~~~~~~~ 362 (577)
++.+..+|+++|.+.=.++++.+ .++.... ..|...+. +...|.. .+.+..
T Consensus 257 ~~a~~~~~~~~~l~~A~~~~~~~~~~~~~d~--------~~gg~~~~------~~~~g~~--~~~l~d------------ 308 (402)
T 1fp3_A 257 LRHSSRSGDAKLRAHVIDTFLLLPFRSGWDA--------DHGGLFYF------QDADGLC--PTQLEW------------ 308 (402)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTHHHHHHHBCT--------TTCSBCSC------EETTSCC--CSSTTT------------
T ss_pred HHHHHHcCChHHHHHHHHHHHHHHHHHhccC--------CCCCEEEe------ecCCCCc--cccCcC------------
Confidence 89999999998888766776666 5554221 11211110 0000100 000000
Q ss_pred HHhCCCCcEEEccCccccCCCCcCCCChhhHHHHHHHHHhcCChhHHHHHHHHHHHHHhhccc
Q 008122 363 KKFGVLPERYLLDHLMLHPTEKYYPLRPELAESTFYLYQATKDPWYLEVGESIVNSLNSYTKV 425 (577)
Q Consensus 363 ~~~Gl~PE~~~~~~~~~~~~~~~Y~LRPE~iES~fyLyR~TgD~~Yre~gW~if~aiek~~r~ 425 (577)
..... .+ --|.|-.+..||++|||++|++++-++++-+.++..-
T Consensus 309 -------------~~~~~-----W~-qaea~~a~l~ly~~tgd~~yl~~a~~~~~~~~~~f~D 352 (402)
T 1fp3_A 309 -------------AMKLW-----WP-HSEAMIAFLMGYSESGDPALLRLFYQVAEYTFRQFRD 352 (402)
T ss_dssp -------------TCEEH-----HH-HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBC
T ss_pred -------------CCcCc-----HH-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcC
Confidence 00000 00 1378999999999999999999999999998877754
No 22
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=94.81 E-value=0.2 Score=55.25 Aligned_cols=167 Identities=16% Similarity=0.145 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHhCCCcc--cc-----------cccccchhhhhcccchhhh-hccccchhhhccccchHHHHHHHHHH
Q 008122 111 NTEFERAVLWLSENLNFDV--DA-----------RINLFECNIRVLGGLVSAH-ILATDSANRLVQGSYKNQLLTLAEDL 176 (577)
Q Consensus 111 ~~EF~~A~~~v~~~l~F~~--d~-----------~VsvFETtIR~LGGLLSAY-~Ls~d~~~~~~~~~y~~~LL~kA~dL 176 (577)
.+-|++|++-|.+++-+.. ++ ....++----++||+++-- .+... ...++.|++|
T Consensus 323 ~~my~~a~~~i~~~L~~~~~~~~~~~v~~~~~g~~~~~~~hL~cF~gG~~aLgg~~~~~-----------~~~l~~a~~L 391 (538)
T 1x9d_A 323 LEDYVEAIEGVRTHLLRHSEPSKLTFVGELAHGRFSAKMDHLVCFLPGTLALGVYHGLP-----------ASHMELAQEL 391 (538)
T ss_dssp HHHHHHHHHHHHHHTEEECTTTCCEEECEEETTEEECEEEGGGGHHHHHHHHHHHTTCC-----------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCCceEEEeccCCccCcccchHhhhhhhHHHhcCcccCc-----------HHHHHHHHHH
Confidence 4678899998888875432 10 1122334445567765421 11111 2578889998
Q ss_pred HhhhccCCC-CCCCCccceeeccCCCCCC-CCCCccccccccch--hhh----hHHHHhhCCchHHHHHHHHHHHHHhc-
Q 008122 177 GRRFLPAFD-TPTGLPYAWINLKYGVMEN-ETNETSTSGCGSLI--LEM----GALSRLTGDPIYESAALRALRRLWSM- 247 (577)
Q Consensus 177 adrLlpAFd-TptGiP~~~vNl~~g~~~~-~~~~t~lAe~GTl~--LEF----~~LS~lTGd~kY~~~a~ra~~~L~~~- 247 (577)
++-..-++. +|+|+.--.+++......+ ........+ +... -|+ -+|-|+||||+|.+.+-++++.|-+.
T Consensus 392 ~~tC~~~Y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~d-~~y~LRPE~IES~fylyR~TgD~~yre~gw~~f~ai~k~~ 470 (538)
T 1x9d_A 392 METCYQMNRQMETGLSPEIVHFNLYPQPGRRDVEVKPAD-RHNLLRPETVESLFYLYRVTGDRKYQDWGWEILQSFSRFT 470 (538)
T ss_dssp HHHHHHHHHTSTTSCCCSEEECCSSCCTTCCSCBCCGGG-CCBCCCCHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcccCCCceEEEeccCCCccccceeeeccC-cccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc
Confidence 887666675 7999854444443321000 000000011 1111 243 36999999999999999999999875
Q ss_pred cCCCCCcceeeecCCCceecccccccCCCchhh--hhHHHHHHhcCch
Q 008122 248 RSSLNLLGTTLDVTTGEWIEYSSGIGAGVDSFY--EYLFKAHILFGKE 293 (577)
Q Consensus 248 ~~~~gL~~~~id~~tG~~~~~~~~~Ga~~DSyY--EYLlK~~iL~g~~ 293 (577)
+...|-+...-|+.+.. .....-...||+ |-|-=.|+|+.++
T Consensus 471 rt~~Ggya~i~dV~~~~----~~~~~D~mESFfLAETLKYlYLLFsd~ 514 (538)
T 1x9d_A 471 RVPSGGYSSINNVQDPQ----KPEPRDKMESFFLGETLKYLFLLFSDD 514 (538)
T ss_dssp BCTTSCBCCBSCTTCSS----CCCBCSCBCHHHHHTHHHHHHHHHCCC
T ss_pred ccccCCccccccccCCC----CCCcCCCcccHHHHHHHHHHHHhcCCC
Confidence 33334244445665410 012223456775 4443337777654
No 23
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=94.64 E-value=0.16 Score=53.54 Aligned_cols=128 Identities=13% Similarity=0.020 Sum_probs=83.7
Q ss_pred hhcccchhhhhccccchhhhccccchHHHHHHHHHHHhhhccCCCCCCCCccceeeccCCCCCCCCCCccccccccchhh
Q 008122 141 RVLGGLVSAHILATDSANRLVQGSYKNQLLTLAEDLGRRFLPAFDTPTGLPYAWINLKYGVMENETNETSTSGCGSLILE 220 (577)
Q Consensus 141 R~LGGLLSAY~Ls~d~~~~~~~~~y~~~LL~kA~dLadrLlpAFdTptGiP~~~vNl~~g~~~~~~~~t~lAe~GTl~LE 220 (577)
=++|||+-+|+++||+ .+++.|++..+.++.. +.|.. |. ..+.+.+-
T Consensus 72 ~~~~gl~~~ye~Tgd~-----------~y~~~a~~~~~~~~~~-----~~~~~--n~---------------D~~~~~~~ 118 (382)
T 3pmm_A 72 VGLYGIYQYYQQTGDI-----------EMRDIIDRWFADRFAE-----GATTK--NV---------------NTMAPFLT 118 (382)
T ss_dssp HHHHHHHHHHHHHCCH-----------HHHHHHHHHHHHHHHH-----CCCCC--CT---------------TTTTTHHH
T ss_pred HHHHHHHHHHHHHCCH-----------HHHHHHHHHHHHHHcC-----CCCcC--cc---------------cchHHHHH
Confidence 4799999999999998 8899999988877532 22211 11 01111123
Q ss_pred hhHHHHhhCCchHHHHHHHHHHHHHhc--cCCCCCcceee-e-cCCC-ceecccccccCCCch---hhhhHHHHHHhcCc
Q 008122 221 MGALSRLTGDPIYESAALRALRRLWSM--RSSLNLLGTTL-D-VTTG-EWIEYSSGIGAGVDS---FYEYLFKAHILFGK 292 (577)
Q Consensus 221 F~~LS~lTGd~kY~~~a~ra~~~L~~~--~~~~gL~~~~i-d-~~tG-~~~~~~~~~Ga~~DS---yYEYLlK~~iL~g~ 292 (577)
+..|-++|||++|.++|.++.+.|.+. |...|-+-... + +..+ -| .|. --..|.+.+.++|+
T Consensus 119 l~~lY~~Tgd~~Yl~~a~~~ad~L~~~~~r~~~Ggf~~~~~~~~~~~~~W----------iDgl~M~~p~La~~~~~tgd 188 (382)
T 3pmm_A 119 LAYRFEETGRMAYLPWLESWAEWAMHEMPRTEQGGMQHMTLAEENHQQMW----------DDTLMMTVLPLAKIGKLLNR 188 (382)
T ss_dssp HHHHHHHHCCGGGHHHHHHHHHHHHHTSCBCGGGCBCCCCSSCCCTTEEE----------TTHHHHTHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCcCCCeeeecCCCCCCCcEE----------ecchhhhHHHHHHHHHHHCC
Confidence 578999999999999999999998653 23333222111 0 1111 12 232 22477889999999
Q ss_pred hHHHHHHHHHHHHHHHHhh
Q 008122 293 EDFWRMFHSAYLAVQKYFR 311 (577)
Q Consensus 293 ~~~~~m~~~a~~~i~k~l~ 311 (577)
+.|.+.-.+.+....+|+.
T Consensus 189 ~~y~d~A~~q~~~~~~~l~ 207 (382)
T 3pmm_A 189 PQYVEEATYQFLLHVQNLM 207 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHB
T ss_pred HHHHHHHHHHHHHHHHHcc
Confidence 9887766666666777764
No 24
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=93.48 E-value=0.24 Score=54.24 Aligned_cols=165 Identities=18% Similarity=0.172 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHhCCCcc---cc-----------cccccchhhhhcccchhhh-hccccchhhhccccchHHHHHHHHHH
Q 008122 112 TEFERAVLWLSENLNFDV---DA-----------RINLFECNIRVLGGLVSAH-ILATDSANRLVQGSYKNQLLTLAEDL 176 (577)
Q Consensus 112 ~EF~~A~~~v~~~l~F~~---d~-----------~VsvFETtIR~LGGLLSAY-~Ls~d~~~~~~~~~y~~~LL~kA~dL 176 (577)
+-|++|++-|.+++-+.. .. ....++----++||+++-- .+.+. ...++.|++|
T Consensus 267 ~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~aLgg~~~~~-----------~~~~~~a~~L 335 (503)
T 1hcu_A 267 DRWVLGADSTIGHLGSHPSTRKDLTFLSSYNGQSTSPNSGHLASFGGGNFILGGILLNE-----------QKYIDFGIKL 335 (503)
T ss_dssp HHHHHHHHHHHHHTEECBTTCTTCCEECEEETTEEESEEEGGGGGHHHHHHHHHHHHTC-----------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchhhhhhhHHHHhcCccccc-----------HHHHHHHHHH
Confidence 567889998888876553 11 1122334445667765421 11111 2678888888
Q ss_pred HhhhccCCC-CCCCCccceeeccCCCCCCC--CCC----------ccccccccch--hhh----hHHHHhhCCchHHHHH
Q 008122 177 GRRFLPAFD-TPTGLPYAWINLKYGVMENE--TNE----------TSTSGCGSLI--LEM----GALSRLTGDPIYESAA 237 (577)
Q Consensus 177 adrLlpAFd-TptGiP~~~vNl~~g~~~~~--~~~----------t~lAe~GTl~--LEF----~~LS~lTGd~kY~~~a 237 (577)
++--.-+++ ||+|+.--.+++.....+.. ... ..... +... -|+ -+|-|+||||+|.+.+
T Consensus 336 ~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~y~LRPE~iES~fylyR~TgD~~yre~g 414 (503)
T 1hcu_A 336 ASSYFGTYTQTASGIGPEGFAWVDSVTGAGGSPPSSQSGFYSSAGFWVTA-PYYILRPETLESLYYAYRVTGDSKWQDLA 414 (503)
T ss_dssp HHHHHHHHHTSSSSCCCSEEECCBTTTCCSCCCCGGGHHHHHHHSCEEEE-CCBCCCCHHHHHHHHHHHHHCBHHHHHHH
T ss_pred HHHHHHHHHhCccCCCceEEEeecCccccccCCcccccccccCCCceecc-ccccCChHHHHHHHHHHHHhCCHHHHHHH
Confidence 888777775 79998656666644321100 000 00111 1122 244 3699999999999999
Q ss_pred HHHHHHHHhc-cCCCCCcceeeecCCCceecccccccCCCchhh--hhHHHHHHhcCch
Q 008122 238 LRALRRLWSM-RSSLNLLGTTLDVTTGEWIEYSSGIGAGVDSFY--EYLFKAHILFGKE 293 (577)
Q Consensus 238 ~ra~~~L~~~-~~~~gL~~~~id~~tG~~~~~~~~~Ga~~DSyY--EYLlK~~iL~g~~ 293 (577)
-++++.|-+. +...| +...-|+.+.. .....-...||+ |-|-=.|+|+.++
T Consensus 415 w~if~ai~k~~r~~~G-ya~i~dV~~~~----~~~~~D~meSF~laETLKYlYLLFsd~ 468 (503)
T 1hcu_A 415 WEALSAIEDACRAGSA-YSSINDVTQAN----GGGASDDMESFWFAEALKYAYLIFAEE 468 (503)
T ss_dssp HHHHHHHHHHHEETTE-ECCBSCTTSTT----CSCBCSCBCHHHHHTHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHhhccC-CcccccccCCC----CCCcCCccchHHHHHHHHHHheeccCC
Confidence 9999999875 32223 22333554411 011223456776 5443346676653
No 25
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=93.04 E-value=0.11 Score=56.11 Aligned_cols=149 Identities=9% Similarity=-0.006 Sum_probs=85.7
Q ss_pred hhhcccchhhhhccccchhhhccccchHHHHHHHHHHHhhhccCCC-CCCCCccceeeccCCCCCCCCCCccccccccch
Q 008122 140 IRVLGGLVSAHILATDSANRLVQGSYKNQLLTLAEDLGRRFLPAFD-TPTGLPYAWINLKYGVMENETNETSTSGCGSLI 218 (577)
Q Consensus 140 IR~LGGLLSAY~Ls~d~~~~~~~~~y~~~LL~kA~dLadrLlpAFd-TptGiP~~~vNl~~g~~~~~~~~t~lAe~GTl~ 218 (577)
-.++=+|+-+|.+++++ .+++.|.+++|.|+.-|. |+.|..+.. . +. ........=-|.
T Consensus 148 g~~~~~Li~lY~~T~d~-----------~yl~~a~~~ad~L~~~~pRt~~Ggf~h~-----~--~~--~~q~WiD~lyM~ 207 (445)
T 3k11_A 148 GAVCTAMIKLRLKDESL-----------PVDGLIQNYFDFIINKEYRLADGTFARN-----R--PQ--RNTLWLDDMFMG 207 (445)
T ss_dssp HHHHHHHHHHHHHCTTC-----------CCHHHHHHHHHHHHHTSCBCTTCCBCBC-----S--SS--TTEEETHHHHHH
T ss_pred HHHHHHHHHHHHhcCCH-----------HHHHHHHHHHHHHHHcCCCCCCCceeec-----C--CC--CCceEecchhhH
Confidence 34446788999999988 789999999999999884 777776531 1 11 111222222234
Q ss_pred hhh-hHHHHhhCCch--HHHHHHHHHHHHHhc-c-CCCCCcceeeecCCC-----ceecccccccCCC-chhhhhHHHHH
Q 008122 219 LEM-GALSRLTGDPI--YESAALRALRRLWSM-R-SSLNLLGTTLDVTTG-----EWIEYSSGIGAGV-DSFYEYLFKAH 287 (577)
Q Consensus 219 LEF-~~LS~lTGd~k--Y~~~a~ra~~~L~~~-~-~~~gL~~~~id~~tG-----~~~~~~~~~Ga~~-DSyYEYLlK~~ 287 (577)
+.| ..++++|||++ |.+.|.+-+....+. . ...||+-...+.+.+ -|... -+|+..+ --.|++|.+.+
T Consensus 208 ~pfla~~~~~tgd~~~~y~d~A~~q~~~~~~~l~D~~tGL~~Hg~~~~~~~~~~~~WaRG-nGW~~~gl~~~l~~lp~~~ 286 (445)
T 3k11_A 208 IPAVAQMSRYDKEAKNKYLAEAVKQFLQFADRMFIPEKGLYRHGWVESSTDHPAFCWARA-NGWALLTACELLDVLPEDY 286 (445)
T ss_dssp HHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHEETTTTEECSEEETTCSSCCCCCBHHH-HHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHCCcchHHHHHHHHHHHHHHHhcccCCCCCEeeeecCCCCCCCcceeccc-chHHHHHHHHHHHhccccc
Confidence 444 45899999999 988887766555442 2 234555433332221 11111 1121111 12234433321
Q ss_pred HhcCchHHHHHHHHHHHHHHHHhh
Q 008122 288 ILFGKEDFWRMFHSAYLAVQKYFR 311 (577)
Q Consensus 288 iL~g~~~~~~m~~~a~~~i~k~l~ 311 (577)
.+++++.+.|.+.++++.++..
T Consensus 287 --~~r~~l~~~~~~~a~~l~~~Q~ 308 (445)
T 3k11_A 287 --PQRPKVMDYFRAHVRGVTALQS 308 (445)
T ss_dssp --TTHHHHHHHHHHHHHHHHTTCC
T ss_pred --ccHHHHHHHHHHHHHHHHHhCC
Confidence 2345688888888888888753
No 26
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=92.39 E-value=4.6 Score=41.80 Aligned_cols=138 Identities=13% Similarity=0.070 Sum_probs=79.1
Q ss_pred chHHHHHHHHHHHhhhc-cCCCCCCCCccceeeccCCCCCCCCCCccccccccchhhhhHHHHhh---CCchHHHHHHHH
Q 008122 165 YKNQLLTLAEDLGRRFL-PAFDTPTGLPYAWINLKYGVMENETNETSTSGCGSLILEMGALSRLT---GDPIYESAALRA 240 (577)
Q Consensus 165 y~~~LL~kA~dLadrLl-pAFdTptGiP~~~vNl~~g~~~~~~~~t~lAe~GTl~LEF~~LS~lT---Gd~kY~~~a~ra 240 (577)
|++.|-+...++....+ ..||...|=.+..++.. |.+.. . ...+---|=++.-|..+.+++ |++.|.++|+++
T Consensus 11 ~~~~l~~~~~~~l~~w~~~~~D~~~GGf~~~~~~d-g~~~~-~-~k~l~~nar~l~~~a~a~~~~~~~~~~~~l~~A~~~ 87 (402)
T 1fp3_A 11 WKERVGQELDRVMAFWLEHSHDREHGGFFTCLGRD-GRVYD-D-LKYVWLQGRQVWMYCRLYRKLERFHRPELLDAAKAG 87 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHSBCTTTSSBCCCBCTT-SCBSC-C-CEEHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccCCCCCCCCEeeEECCC-CCCCC-C-ccchhhhHHHHHHHHHHHHHhcccCCHHHHHHHHHH
Confidence 44455333345555666 68898777677766643 33321 1 111111222345566677776 999999999999
Q ss_pred HHHHHhc-cCCC---CCcceeeecCCCceecccccccCCCc--hhhhh-HHHHHHhcCchHHHHHHHHHHHHHHHHhh
Q 008122 241 LRRLWSM-RSSL---NLLGTTLDVTTGEWIEYSSGIGAGVD--SFYEY-LFKAHILFGKEDFWRMFHSAYLAVQKYFR 311 (577)
Q Consensus 241 ~~~L~~~-~~~~---gL~~~~id~~tG~~~~~~~~~Ga~~D--SyYEY-LlK~~iL~g~~~~~~m~~~a~~~i~k~l~ 311 (577)
.+.|.+. .... |++ ..+|. .|+.... ..... .|+=+ ++..|..+|++.+++.-.+.++.|.+++.
T Consensus 88 ~~fl~~~~~d~~gg~g~~-~s~d~-dg~~~~~----~~~lyd~af~~~a~~~~~~atgd~~~~~~A~~l~~~~~~~~~ 159 (402)
T 1fp3_A 88 GEFLLRHARVAPPEKKCA-FVLTR-DGRPVKV----QRSIFSECFYTMAMNELWRVTAEARYQSEAVDMMDQIVHWVR 159 (402)
T ss_dssp HHHHHHHTBSSTTSCCBC-SEECT-TSCEEEC----CSSSHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCcCCCCceE-EEECC-CCCcccc----ccchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhc
Confidence 9999864 3322 344 44553 2222211 11111 12211 23445678998888888888888888875
No 27
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=92.20 E-value=1.5 Score=47.81 Aligned_cols=168 Identities=20% Similarity=0.161 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHhCCCc-ccc-----------cccccchhhhhcccchhhhhccccchhhhccccchHHHHHHHHHHHh
Q 008122 111 NTEFERAVLWLSENLNFD-VDA-----------RINLFECNIRVLGGLVSAHILATDSANRLVQGSYKNQLLTLAEDLGR 178 (577)
Q Consensus 111 ~~EF~~A~~~v~~~l~F~-~d~-----------~VsvFETtIR~LGGLLSAY~Ls~d~~~~~~~~~y~~~LL~kA~dLad 178 (577)
.+-|++|++-|.+++-+. .++ ....++----++||++.- .++.. ...-.+..++.|++|++
T Consensus 259 ~~m~~~a~~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~gG~~aL---g~~~~----~~~~~~~~l~~a~~l~~ 331 (478)
T 1nxc_A 259 KKMYFDAVQAIETHLIRKSSGGLTYIAEWKGGLLEHKMGHLTCFAGGMFAL---GADGA----PEARAQHYLELGAEIAR 331 (478)
T ss_dssp HHHHHHHHHHHHHHTEEECTTSCEEECEEETTEEECEEETGGGGHHHHHHH---TSTTS----CTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCCCcEEEEeccCCcccccccchhhhhHHHHHh---ccccc----cccchHHHHHHHHHHHH
Confidence 467889999998887542 111 112233344567776642 22110 00112478999999998
Q ss_pred hhccCCC-CCCCCccceeeccCCCCCCCCCCccccccc-cch---hh-hhHHHHhhCCchHHHHHHHHHHHHHhccCCCC
Q 008122 179 RFLPAFD-TPTGLPYAWINLKYGVMENETNETSTSGCG-SLI---LE-MGALSRLTGDPIYESAALRALRRLWSMRSSLN 252 (577)
Q Consensus 179 rLlpAFd-TptGiP~~~vNl~~g~~~~~~~~t~lAe~G-Tl~---LE-F~~LS~lTGd~kY~~~a~ra~~~L~~~~~~~g 252 (577)
-..-++. +|+|+.--.+++..+.... .+...+.. -|- +| +-+|-|+||||+|.+.+-++++.|-+.-....
T Consensus 332 tC~~~y~~~~tgl~PE~~~~~~~~~~~---~~~~~~~~y~LRPE~iES~fylyR~TgD~~yre~gw~~f~ai~k~~r~~~ 408 (478)
T 1nxc_A 332 TCHESYNRTYVKLGPEAFRFDGGVEAI---ATRQNEKYYILRPEVIETYMYMWRLTHDPKYRTWAWEAVEALESHCRVNG 408 (478)
T ss_dssp HHHHHHHTSSSSSCCSEEESSTTCSSB---CCSGGGCCBCSCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTEETT
T ss_pred HHHHHHHhcccCCCCeEEEeccCcccc---cccccccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhccc
Confidence 8777775 8999865555554332110 00000100 011 22 23699999999999999999999987532222
Q ss_pred CcceeeecCCCceecccccccCCCchhh--hhHHHHHHhcCch
Q 008122 253 LLGTTLDVTTGEWIEYSSGIGAGVDSFY--EYLFKAHILFGKE 293 (577)
Q Consensus 253 L~~~~id~~tG~~~~~~~~~Ga~~DSyY--EYLlK~~iL~g~~ 293 (577)
-+...-|+.+.. ....-...||+ |-|-=.|+|+.++
T Consensus 409 G~a~i~dV~~~~-----~~~~D~meSF~laETLKYlYLLFsd~ 446 (478)
T 1nxc_A 409 GYSGLRDVYIAR-----ESYDDVQQSFFLAETLKYLYLIFSDD 446 (478)
T ss_dssp EECCBSCTTSSS-----CCBCCCBCHHHHHTHHHHHHHHTSCT
T ss_pred ccccccccCCCC-----CCcCCCCCchHHHHHHHHHHeeccCC
Confidence 122333444321 11223346774 3332337777664
No 28
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=92.05 E-value=0.88 Score=48.06 Aligned_cols=162 Identities=12% Similarity=0.098 Sum_probs=92.1
Q ss_pred cccchhhhhccccchhhhccccchHHHHHHHHHHHhhhccCCCC-CCCCccceeeccCCCCCCC---CCCccc----ccc
Q 008122 143 LGGLVSAHILATDSANRLVQGSYKNQLLTLAEDLGRRFLPAFDT-PTGLPYAWINLKYGVMENE---TNETST----SGC 214 (577)
Q Consensus 143 LGGLLSAY~Ls~d~~~~~~~~~y~~~LL~kA~dLadrLlpAFdT-ptGiP~~~vNl~~g~~~~~---~~~t~l----Ae~ 214 (577)
+-+|+.+|.+++++ .++++|+++.+.+..-+.. ++|-....++..-...... ...... .+.
T Consensus 178 ~~al~~l~~~tgd~-----------~~~~~A~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~dd~~~r~~~~~~~p 246 (421)
T 2zbl_A 178 VEAFLIVYDVTHDK-----------KWLDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTP 246 (421)
T ss_dssp HHHHHHHHHTTCCT-----------HHHHHHHHHHHHHCCCCCGGGTTCCCCEECTTSCBCTTTTTTSTTCSSSCSSBCH
T ss_pred HHHHHHHHHhhCCH-----------HHHHHHHHHHHHHHHHhccCCCCchhhhcCCccccchhccCCCcccccccCCCCC
Confidence 55677889999988 8999999999999987754 4443222222211100000 000000 112
Q ss_pred ccchhhhh----HHHHhh---CC--c-hHHHHHHHHHHHHHhcc--CC--CCCcceeeecCCCceeccc-ccccCCCchh
Q 008122 215 GSLILEMG----ALSRLT---GD--P-IYESAALRALRRLWSMR--SS--LNLLGTTLDVTTGEWIEYS-SGIGAGVDSF 279 (577)
Q Consensus 215 GTl~LEF~----~LS~lT---Gd--~-kY~~~a~ra~~~L~~~~--~~--~gL~~~~id~~tG~~~~~~-~~~Ga~~DSy 279 (577)
|-. +|.. .+.++| || + .|.+.|.++++.+.+.- .. .|++-. .|.. |..+... .-+. . --.
T Consensus 247 gh~-iE~~wlLl~~~~~~~~~~~~~~~~~l~~A~~l~~~~~~~g~d~~~~GG~~~~-~~~~-g~~~~~~k~~w~-~-aea 321 (421)
T 2zbl_A 247 GAW-IEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYS-VDWD-GKPIVRERVRWP-I-VEA 321 (421)
T ss_dssp HHH-HHHHHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHBSCSSSSSBCSC-BCTT-SCBSCCCEEHHH-H-HHH
T ss_pred ChH-HHHHHHHHHHHHHcccccccchHHHHHHHHHHHHHHHHHhcCCCCCCcEEEe-ecCC-CCccCCCcccHH-H-HHH
Confidence 221 3433 346667 67 7 89999999998886532 12 344433 3322 2211110 0011 0 012
Q ss_pred hhhHHHHHHhcCchHHHHHHHHHHHHHHHHhhc---CCCccccc
Q 008122 280 YEYLFKAHILFGKEDFWRMFHSAYLAVQKYFRH---GPWYHEAD 320 (577)
Q Consensus 280 YEYLlK~~iL~g~~~~~~m~~~a~~~i~k~l~~---~~~~~~~~ 320 (577)
-.-|++.|.++|+++|++.+.+..+.+.+|+.. +.|+...+
T Consensus 322 ~~all~l~~~tgd~~yl~~a~~~~~~~~~~~~d~~~G~w~~~l~ 365 (421)
T 2zbl_A 322 MGTAYALYTLTDDSQYEEWYQKWWDYCIKYLMDYENGSWWQELD 365 (421)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCTTTSSBCSEEC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCCCCCCeeEeeEC
Confidence 345678889999999999999999999988863 34554333
No 29
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=89.08 E-value=1.9 Score=47.33 Aligned_cols=218 Identities=13% Similarity=0.020 Sum_probs=117.1
Q ss_pred CchHHHHHHHHHHHHHhccCCCCCcceeeecCCCceecccccc-c-CCCchhhhhHHHHHHhc-----CchHHHHHHHHH
Q 008122 230 DPIYESAALRALRRLWSMRSSLNLLGTTLDVTTGEWIEYSSGI-G-AGVDSFYEYLFKAHILF-----GKEDFWRMFHSA 302 (577)
Q Consensus 230 d~kY~~~a~ra~~~L~~~~~~~gL~~~~id~~tG~~~~~~~~~-G-a~~DSyYEYLlK~~iL~-----g~~~~~~m~~~a 302 (577)
...-.++++.++.+-|+.......--..+.|-+++..... + | +-+-+--+-|==.||+. .++...+-|.+|
T Consensus 2 ~~~rr~~Vk~~F~haw~~Y~~~Awg~DEL~PlS~~g~~~~--~~g~g~G~TlVDSLDTL~IM~~~~~~~~~gl~~Ef~~A 79 (511)
T 1dl2_A 2 AGEMRDRIESMFLESWRDYSKHGWGYDVYGPIEHTSHNMP--RGNQPLGWIIVDSVDTLMLMYNSSTLYKSEFEAEIQRS 79 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTCSEEETTTTEEECSS--TTCCCCCTTHHHHHHHHHHHHHHCSSSHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCcCCCC--ccCCccceeeeecccceEEeccccccccCCcHHHHHHH
Confidence 3455678889999999865433333355666666554331 2 2 22344555566667871 123577789999
Q ss_pred HHHHHHHhhcCCCccccccCCCcceeccccccccccccchh---hc------cc---cccchhhHHHHHHHHH--HhCCC
Q 008122 303 YLAVQKYFRHGPWYHEADMRNGKATYWQLTSLQAFWPGLQV---LV------GD---IAAANSSHREFVHVWK--KFGVL 368 (577)
Q Consensus 303 ~~~i~k~l~~~~~~~~~~~~~g~~~~~~~~hL~cF~pG~~~---L~------g~---~~~a~~~~~~~~~~~~--~~Gl~ 368 (577)
++-|.+.+.... ++.+ .. ++.--=+++|++. |. |+ +..|.+.-....-.+. ++|+.
T Consensus 80 ~~~V~~~l~F~~--------d~~V-sv-FETtIR~LGGLLSAy~Ls~~~~~~~d~~lL~kA~dLadrLlpAFd~TptgiP 149 (511)
T 1dl2_A 80 EHWINDVLDFDI--------DAEV-NV-FETTIRMLGGLLSAYHLSDVLEVGNKTVYLNKAIDLGDRLALAFLSTQTGIP 149 (511)
T ss_dssp HHHHHHTCCCCC--------SSEE-EH-HHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHGGGGSSSSSCC
T ss_pred HHHHHHhcCCCC--------Ccee-ch-hheehhhhhhhhhHHHhcccccCCCcHHHHHHHHHHHHHHHHhhcCCCCCCC
Confidence 988887643221 1111 00 1111113455542 22 21 1223332222222333 67877
Q ss_pred CcEEEccCccccCCCCcCCCChhhHHH------HHHHHHhcCChhHHHHHHHHHHHHHhhc----ccCCCcccccccccc
Q 008122 369 PERYLLDHLMLHPTEKYYPLRPELAES------TFYLYQATKDPWYLEVGESIVNSLNSYT----KVDGGFASIRDVTTM 438 (577)
Q Consensus 369 PE~~~~~~~~~~~~~~~Y~LRPE~iES------~fyLyR~TgD~~Yre~gW~if~aiek~~----r~~~Gya~i~dV~~~ 438 (577)
--++++..+......... -..-+.|. .-+|-|+||||+|.+.+-++++.|.+.- +.++=+...-|+.++
T Consensus 150 ~~~vnl~~g~~~~~~~~~-~~s~~Ae~gSl~LEF~~LS~LTGd~~Y~~~a~r~~~~l~~~~~~~~~~~GL~p~~i~~~tg 228 (511)
T 1dl2_A 150 YSSINLHSGQAVKNHADG-GASSTAEFTTLQMEFKYLAYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTG 228 (511)
T ss_dssp CSEEETTTCCEECCSSGG-GCEEHHHHSSCHHHHHHHHHHHTCHHHHHHHHTTHHHHHHHHTHHHHHTTCCBSEECTTTC
T ss_pred CceeecccCCCCCCCCCC-cccccccccceeeeHHHHHHHHCChHHHHHHHHHHHHHHhcccccCCCCCCcceEEcCCCC
Confidence 777877655321110000 00112332 3468999999999999999999998764 455555555566654
Q ss_pred c-------cCCcchhHHHHHHhHHHHHhccC
Q 008122 439 Q-------LEDHQHSFFLAETCKYLYLLFDD 462 (577)
Q Consensus 439 ~-------~~D~meSFflAETLKYLYLLFsd 462 (577)
. ..-...||+ |-|==.|+++.|
T Consensus 229 ~~~~~~~~lGa~~DS~Y--EYLlK~~il~~d 257 (511)
T 1dl2_A 229 KFGASTIRFGSRGDSFY--EYLLKQYLLTHE 257 (511)
T ss_dssp CBCSCCBCSSTTTHHHH--HHHHHHHHHHCC
T ss_pred CccCCeeeecCCCCcHH--HHHHHHHHhcCC
Confidence 3 345567875 544334555544
No 30
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=87.96 E-value=1.3 Score=46.96 Aligned_cols=91 Identities=9% Similarity=0.008 Sum_probs=57.7
Q ss_pred ccccccccchhhhhHHHHhhCCchHHHHHHHHHHHHHhccCCCCCcceeeecCCCceecccccccCCCchhhhhHHHHHH
Q 008122 209 TSTSGCGSLILEMGALSRLTGDPIYESAALRALRRLWSMRSSLNLLGTTLDVTTGEWIEYSSGIGAGVDSFYEYLFKAHI 288 (577)
Q Consensus 209 t~lAe~GTl~LEF~~LS~lTGd~kY~~~a~ra~~~L~~~~~~~gL~~~~id~~tG~~~~~~~~~Ga~~DSyYEYLlK~~i 288 (577)
...|++..+.+. +.+.|++++|.+.++++.+.+.+.....|-+|..++.... ...+|--|.-..-.-|++.+.
T Consensus 231 HG~aGI~~~Ll~---~~~~~~~~~~~~~i~~~l~~l~~~~~~~g~wp~~~~~~~~----~~~~wChG~~Gi~~~l~~~~~ 303 (411)
T 3e6u_A 231 HGLAGIYYYLMQ---PSLQVSQGKLHSLVKPSVDYVCQLKFPSGNYPPCIGDNRD----LLVHWCHGAPGVIYMLIQAYK 303 (411)
T ss_dssp TSHHHHHHHHTC---GGGCCCHHHHHHTHHHHHHHHHHTCCTTSCCCSBTTCCCC----CCCSSSSSHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHH---HHhhcChHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccC----ccccccCCcHHHHHHHHHHHH
Confidence 345666555554 4688999999999999999998876545656654432111 122333333334456788888
Q ss_pred hcCchHHHHHHHHHHHHH
Q 008122 289 LFGKEDFWRMFHSAYLAV 306 (577)
Q Consensus 289 L~g~~~~~~m~~~a~~~i 306 (577)
.++++++.+.-.++.+.+
T Consensus 304 ~~~~~~~~~~a~~~~~~~ 321 (411)
T 3e6u_A 304 VFREEKYLCDAYQCADVI 321 (411)
T ss_dssp HHCCHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHH
Confidence 899988776555554443
No 31
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=87.51 E-value=0.33 Score=52.38 Aligned_cols=138 Identities=9% Similarity=0.052 Sum_probs=86.0
Q ss_pred hcccchhhhhccccchhhhccccchHHHHHHHHHHHhhhc---cCCC----CCCCC--ccceeeccCCCCCCCCCCcccc
Q 008122 142 VLGGLVSAHILATDSANRLVQGSYKNQLLTLAEDLGRRFL---PAFD----TPTGL--PYAWINLKYGVMENETNETSTS 212 (577)
Q Consensus 142 ~LGGLLSAY~Ls~d~~~~~~~~~y~~~LL~kA~dLadrLl---pAFd----TptGi--P~~~vNl~~g~~~~~~~~t~lA 212 (577)
.+.||+-||..+||+ .+++.|++-.+.+. |.|+ ...++ |+.. +.. ...+-
T Consensus 87 ~l~gl~~ay~~Tgd~-----------kY~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~~r~-----~~~-----~~~LD 145 (445)
T 3k11_A 87 TYSALIAAAETTGDK-----------RYTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQLLQ-----ILT-----PHALD 145 (445)
T ss_dssp HHHHHHHHHHHHCCH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHH-----HHS-----CCSGG
T ss_pred HHHHHHHHHHHHCCH-----------HHHHHHHHHHHHHHhccchhhhhhhccCCeeccccc-----ccC-----CCcch
Confidence 588999999999998 66766666665543 3331 10111 1111 100 12355
Q ss_pred ccccchhhhhHHHHhhCCchHHHHHHHHHHHHHhcc--CCCCCcceeeecCCC-ceecccccccCCCchhh---hhHHHH
Q 008122 213 GCGSLILEMGALSRLTGDPIYESAALRALRRLWSMR--SSLNLLGTTLDVTTG-EWIEYSSGIGAGVDSFY---EYLFKA 286 (577)
Q Consensus 213 e~GTl~LEF~~LS~lTGd~kY~~~a~ra~~~L~~~~--~~~gL~~~~id~~tG-~~~~~~~~~Ga~~DSyY---EYLlK~ 286 (577)
..|.+.+-+..+.+.|+|++|.++|....+.|.... ...|-+-. -++..+ -| .|.-| ..|.+.
T Consensus 146 D~g~~~~~Li~lY~~T~d~~yl~~a~~~ad~L~~~~pRt~~Ggf~h-~~~~~~q~W----------iD~lyM~~pfla~~ 214 (445)
T 3k11_A 146 DAGAVCTAMIKLRLKDESLPVDGLIQNYFDFIINKEYRLADGTFAR-NRPQRNTLW----------LDDMFMGIPAVAQM 214 (445)
T ss_dssp GTHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHTSCBCTTCCBCB-CSSSTTEEE----------THHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHcCCCCCCCceee-cCCCCCceE----------ecchhhHHHHHHHH
Confidence 678888999999999999999999999999987753 33443322 122222 23 24433 677888
Q ss_pred HHhcCchH--HHHHHHHHHHHHHHHhh
Q 008122 287 HILFGKED--FWRMFHSAYLAVQKYFR 311 (577)
Q Consensus 287 ~iL~g~~~--~~~m~~~a~~~i~k~l~ 311 (577)
..++|+++ |.+.=.+-+....+|+.
T Consensus 215 ~~~tgd~~~~y~d~A~~q~~~~~~~l~ 241 (445)
T 3k11_A 215 SRYDKEAKNKYLAEAVKQFLQFADRMF 241 (445)
T ss_dssp HHHCGGGHHHHHHHHHHHHHHHHHHHE
T ss_pred HHHHCCcchHHHHHHHHHHHHHHHhcc
Confidence 99999987 65543333444455553
No 32
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=87.16 E-value=0.81 Score=49.43 Aligned_cols=98 Identities=27% Similarity=0.361 Sum_probs=60.1
Q ss_pred ccCCCCCCCCccceeeccCCCCCCCCCCcccccccc---chhhhhHHHHhhCCchHHHHHHHHHHHHHhc-cCCCCCc--
Q 008122 181 LPAFDTPTGLPYAWINLKYGVMENETNETSTSGCGS---LILEMGALSRLTGDPIYESAALRALRRLWSM-RSSLNLL-- 254 (577)
Q Consensus 181 lpAFdTptGiP~~~vNl~~g~~~~~~~~t~lAe~GT---l~LEF~~LS~lTGd~kY~~~a~ra~~~L~~~-~~~~gL~-- 254 (577)
.-+||+.|+-|..|++.. |. ...++-+.| +.==+..||.+||||+|.+.|..+.+..... ....||+
T Consensus 31 ADG~D~~t~~pV~W~~pd-g~------~~~iSNfAsQQN~lR~L~~LS~lTgd~~Y~q~A~~~~~yf~dh~vd~sGL~~W 103 (543)
T 2v8i_A 31 ADGVDPRTGQQLEWIFPD-GR------RAVLSNFSAQQNLMRVMSGLSQLSGDPRYQKRAEDIVRYHFQNYQDPSGLLYW 103 (543)
T ss_dssp CSEECTTTCCBCEEECTT-SC------EEEEECGGGCHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHSBCTTSCBSC
T ss_pred ccccccCCCCceeeeCCC-CC------ccccccHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHcccCCCCceee
Confidence 345666777777766654 21 222333333 2233457999999999999999999988765 2345665
Q ss_pred c--eeeecCCCceecccc----cccCCCchhhhhHHH
Q 008122 255 G--TTLDVTTGEWIEYSS----GIGAGVDSFYEYLFK 285 (577)
Q Consensus 255 ~--~~id~~tG~~~~~~~----~~Ga~~DSyYEYLlK 285 (577)
| .+||.+|.+-.+... .==-..=.|||-|..
T Consensus 104 GGHrFi~L~tl~~eGP~~K~~VHELKhh~PyY~lm~~ 140 (543)
T 2v8i_A 104 GGHRFVDLKTLQPEGPSEKEMVHELKNAYPYYDLMFS 140 (543)
T ss_dssp STTCEEETTTCCEECCCTTCCSBCCSSCCCCHHHHHH
T ss_pred cCceeEeccccCccCccccchhhHhhhcCchHHHHHH
Confidence 2 578888876554321 111223368887654
No 33
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=80.02 E-value=6.1 Score=41.68 Aligned_cols=116 Identities=10% Similarity=-0.062 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHhhhccCCCCCCC-CccceeeccCCCCCCCCCCccccccccchhhhhHHHHhhCCchHHHHHHHHHHHHH
Q 008122 167 NQLLTLAEDLGRRFLPAFDTPTG-LPYAWINLKYGVMENETNETSTSGCGSLILEMGALSRLTGDPIYESAALRALRRLW 245 (577)
Q Consensus 167 ~~LL~kA~dLadrLlpAFdTptG-iP~~~vNl~~g~~~~~~~~t~lAe~GTl~LEF~~LS~lTGd~kY~~~a~ra~~~L~ 245 (577)
+.+++.+++..+.++.-+.. +| .|...-+ +...........++++.. +..+.+.++|++|.+.|.++.+.+|
T Consensus 250 ~~~~~~i~~~l~~l~~~~~~-~g~wp~~~~~---~~~~~~~wChG~~Gi~~~---l~~~~~~~~~~~~~~~a~~~~~~~~ 322 (411)
T 3e6u_A 250 GKLHSLVKPSVDYVCQLKFP-SGNYPPCIGD---NRDLLVHWCHGAPGVIYM---LIQAYKVFREEKYLCDAYQCADVIW 322 (411)
T ss_dssp HHHHHTHHHHHHHHHHTCCT-TSCCCSBTTC---CCCCCCSSSSSHHHHHHH---HHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcc-CCCCCCCCCc---ccCccccccCCcHHHHHH---HHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 47788888888888876653 34 3321100 100011122233444333 5566788999999999999999999
Q ss_pred hccCCCCCcceeeecCCCceecccccccCCCchhhhhHHHHHHhcCchHHHHHHHHHHHH
Q 008122 246 SMRSSLNLLGTTLDVTTGEWIEYSSGIGAGVDSFYEYLFKAHILFGKEDFWRMFHSAYLA 305 (577)
Q Consensus 246 ~~~~~~gL~~~~id~~tG~~~~~~~~~Ga~~DSyYEYLlK~~iL~g~~~~~~m~~~a~~~ 305 (577)
+.. +.. .+..+....+ .--+.|++.|..+|++++++.-....+.
T Consensus 323 ~~g----~~~-----~~~~lChG~a-------G~~~~ll~~~~~t~~~~~~~~A~~~~~~ 366 (411)
T 3e6u_A 323 QYG----LLK-----KGYGLCHGSA-------GNAYAFLTLYNLTQDMKYLYRACKFAEW 366 (411)
T ss_dssp HHC----SBT-----TCSCSTTSHH-------HHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred hcC----ccC-----CCCceecChH-------HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 742 210 1111222222 3457899999999999877765544433
No 34
>1wzz_A Probable endoglucanase; glycoside hydrolase family 8 (GH-8), (alpha/alpha)6 barrel, structural genomics; 1.65A {Gluconacetobacter xylinus} SCOP: a.102.1.2
Probab=78.44 E-value=8.7 Score=39.64 Aligned_cols=145 Identities=17% Similarity=0.115 Sum_probs=86.6
Q ss_pred hhhccCHHHHHHHHHHHHHhCCCccc----------cc------ccccchhhhhcccchhhhhccccchhhhccccchHH
Q 008122 105 LVIMGNNTEFERAVLWLSENLNFDVD----------AR------INLFECNIRVLGGLVSAHILATDSANRLVQGSYKNQ 168 (577)
Q Consensus 105 L~IMGl~~EF~~A~~~v~~~l~F~~d----------~~------VsvFETtIR~LGGLLSAY~Ls~d~~~~~~~~~y~~~ 168 (577)
.++|+-+++|++-.+|..+++....+ +. .|--.-=+++.=+||=|..+=+++ .
T Consensus 58 Av~~~d~~~FD~l~~wt~~~l~~~~~~L~aW~~~~~~~~~v~d~n~AtDgDl~IA~ALl~A~~~Wg~~-----------~ 126 (334)
T 1wzz_A 58 AASAGDLASFQSMWMWARTNLQHTNDKLFSWRFLKGHQPPVPDKNNATDGDLLIALALGRAGKRFQRP-----------D 126 (334)
T ss_dssp HHHHTCHHHHHHHHHHHHHHTBCSSSSCBCSEEETTSSSSSCCCCCCHHHHHHHHHHHHHHHHHHTCH-----------H
T ss_pred HHHhCCHHHHHHHHHHHHHHhccCCCCceEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCH-----------H
Confidence 45689999999999999998754322 11 222223356666666666665554 6
Q ss_pred HHHHHHHHHhhhccC-CCCCCCCccceeeccCCC---CCCCCCCccccccccchhhhhHHHHhhCCchHHHHHHHHHHHH
Q 008122 169 LLTLAEDLGRRFLPA-FDTPTGLPYAWINLKYGV---MENETNETSTSGCGSLILEMGALSRLTGDPIYESAALRALRRL 244 (577)
Q Consensus 169 LL~kA~dLadrLlpA-FdTptGiP~~~vNl~~g~---~~~~~~~t~lAe~GTl~LEF~~LS~lTGd~kY~~~a~ra~~~L 244 (577)
++..|+.|.+.|+.- ....+|.+. |..|. .......++++=. +.-=|..+++.++|+.+.+++++..+.|
T Consensus 127 Y~~~A~~il~~i~~~~v~~~~g~~~----llPg~~gf~~~~~~~~npSY~--~p~~~~~fa~~~~~~~W~~~~~~~~~ll 200 (334)
T 1wzz_A 127 YIQDAMAIYGDVLNLMTMKAGPYVV----LMPGAVGFTKKDSVILNLSYY--VMPSLLQAFDLTADPRWRQVMEDGIRLV 200 (334)
T ss_dssp HHHHHHHHHHHHHHHHEEEETTEEE----ECSCSSSCBCSSEEEECGGGC--CHHHHHHHHHHHCCTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCCCeEE----ECCCcccccCCCCCeechhhc--CHHHHHHHHHccCCchHHHHHHHHHHHH
Confidence 788888888776642 112223211 11111 0000001111111 1122677899999999999999988888
Q ss_pred HhccC-CCCCcceeeec-C-CCcee
Q 008122 245 WSMRS-SLNLLGTTLDV-T-TGEWI 266 (577)
Q Consensus 245 ~~~~~-~~gL~~~~id~-~-tG~~~ 266 (577)
.+.+. ..||+|..+.. + +|.+.
T Consensus 201 ~~~~~~~tGL~pDw~~~~~~~g~~~ 225 (334)
T 1wzz_A 201 SAGRFGQWRLPPDWLAVNRATGALS 225 (334)
T ss_dssp HHSCBTTTTBCCSSEEEETTTCCEE
T ss_pred HHcccCCCCCCccceeeecCCCCcc
Confidence 76643 57999998887 3 55554
No 35
>1kwf_A Endoglucanase A; hydrolase, inverting glycosidase, atomic resolution, protein-carbohydrate interactions, reaction mechanism, cellulase; HET: BGC; 0.94A {Clostridium thermocellum} SCOP: a.102.1.2 PDB: 1is9_A 1cem_A
Probab=66.43 E-value=19 Score=37.47 Aligned_cols=141 Identities=13% Similarity=0.096 Sum_probs=79.2
Q ss_pred hhhccCHHHHHHHHHHHHHhCCCc--------cccc-c-------cccchhhhhcccchhhhhccccchhhhccccchHH
Q 008122 105 LVIMGNNTEFERAVLWLSENLNFD--------VDAR-I-------NLFECNIRVLGGLVSAHILATDSANRLVQGSYKNQ 168 (577)
Q Consensus 105 L~IMGl~~EF~~A~~~v~~~l~F~--------~d~~-V-------svFETtIR~LGGLLSAY~Ls~d~~~~~~~~~y~~~ 168 (577)
..+|+.+++|++-.+|..+++.=+ .++. + |--.-=+++.=+||=|..+=+++ +. ..
T Consensus 72 Av~~~d~~~Fd~l~~wt~~~~~~~~l~aW~~~~~g~~~~~~d~~~~AtDgDl~IA~ALl~A~~~W~~~------g~--~~ 143 (363)
T 1kwf_A 72 AVCFNEQALFDDLYRYVKSHFNGNGLMHWHIDANNNVTSHDGGDGAATDADEDIALALIFADKLWGSS------GA--IN 143 (363)
T ss_dssp HHHTTCHHHHHHHHHHHHTTBCTTSSBCSEECTTSCBCTTTTTTSCBHHHHHHHHHHHHHHHHHHCSS------SS--SC
T ss_pred HHHcCCHHHHHHHHHHHHHhcCCCCCeEEEECCCCCcccCCCCCCCCCHHHHHHHHHHHHHHHHhCCC------cc--hh
Confidence 346899999999999998766311 1121 1 22222256666666666554432 00 03
Q ss_pred HHHHHHHHHhhhccCCCCCCCCccceeeccCCCCCCCCCCccccccccchhh-hhHHHHhhCCchHHHHHHHHHHHHHhc
Q 008122 169 LLTLAEDLGRRFLPAFDTPTGLPYAWINLKYGVMENETNETSTSGCGSLILE-MGALSRLTGDPIYESAALRALRRLWSM 247 (577)
Q Consensus 169 LL~kA~dLadrLlpAFdTptGiP~~~vNl~~g~~~~~~~~t~lAe~GTl~LE-F~~LS~lTGd~kY~~~a~ra~~~L~~~ 247 (577)
++..|+.|.+.|+.-=-.+ |.. .+. .|........++++- +.+. |..+++.||++.+.+++++..+.|.+.
T Consensus 144 Y~~~A~~i~~~i~~~~~~~-~~~--~l~--pg~~~~~~~~~npSY---~~p~~~~~fa~~~~~~~W~~~~~~~~~~l~~~ 215 (363)
T 1kwf_A 144 YGQEARTLINNLYNHCVEH-GSY--VLK--PGDRWGGSSVTNPSY---FAPAWYKVYAQYTGDTRWNQVADKCYQIVEEV 215 (363)
T ss_dssp HHHHHHHHHHHHHHHHBCT-TTC--CBC--SBSSSCBTTBBCGGG---CCHHHHHHHHHHHCCTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccC-CCe--EEe--ccccCCCCCEecchh---cCHHHHHHHHHccCCchHHHHHHHHHHHHHHH
Confidence 5667777777666421112 211 011 111000011122211 2233 477899999999999999988888776
Q ss_pred c---CCCCCcceeeecC
Q 008122 248 R---SSLNLLGTTLDVT 261 (577)
Q Consensus 248 ~---~~~gL~~~~id~~ 261 (577)
. +..||+|..+..+
T Consensus 216 ~~~~~~tGL~PDw~~~~ 232 (363)
T 1kwf_A 216 KKYNNGTGLVPDWCTAS 232 (363)
T ss_dssp TTTSTTSCCCCSSBCTT
T ss_pred hhhcCCCCCCCcceeec
Confidence 5 3579999877643
No 36
>2kus_A SM-AMP-1.1A; plant antimicrobial peptide, chitin-binding peptide, antimic protein; NMR {Stellaria media}
Probab=65.46 E-value=3.2 Score=29.26 Aligned_cols=25 Identities=40% Similarity=0.889 Sum_probs=19.3
Q ss_pred CCCCccccccccccc-cccccceeee
Q 008122 549 GDEECGVDATTCRRR-TCSMAGYCGL 573 (577)
Q Consensus 549 ~~~~~~~~~~~~~~~-~~~~~~~~~~ 573 (577)
++..||-++.+|... =||..||||.
T Consensus 3 ~~~~CG~~~g~C~~g~CCS~~G~CG~ 28 (35)
T 2kus_A 3 PNGQCGPGWGGCRGGLCCSQYGYCGS 28 (35)
T ss_dssp TTCBCBTTTBCCCTTCEECTTSBEEC
T ss_pred CccccCCCCCccCCCCccCCCccccC
Confidence 466778777788765 4799999984
No 37
>1lu0_A CMTI-I, trypsin inhibitor I; serine protease inhibitor, metal coordination, hydrolase INH; 1.03A {Cucurbita maxima} SCOP: g.3.2.1 PDB: 2v1v_A 1cti_A 1ppe_I 2cti_A 2sta_I 3cti_A 2btc_I 2stb_I 2eti_A 2it7_A
Probab=65.15 E-value=2.8 Score=28.16 Aligned_cols=22 Identities=36% Similarity=0.907 Sum_probs=15.9
Q ss_pred CcccCCCCccccccccccccccccceee
Q 008122 545 HRCFGDEECGVDATTCRRRTCSMAGYCG 572 (577)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (577)
-+|..|+|| .+.=.|-++||||
T Consensus 8 m~CK~DsDC------l~~C~C~~~G~CG 29 (29)
T 1lu0_A 8 LECKKDSDC------LAECVCLEHGYCG 29 (29)
T ss_dssp CBCSSGGGS------CTTCCBCTTSBBC
T ss_pred hhccccccc------cCCCEEccccccC
Confidence 356666666 4455799999998
No 38
>1wu4_A Xylanase Y; (alpla/alpha)6 barrel, glycoside hydrolase family 8, hydrola; 1.35A {Bacillus halodurans} SCOP: a.102.1.2 PDB: 1wu5_A* 3a3v_A 2drr_A 2drs_A 1wu6_A* 2drq_A 2dro_A
Probab=63.08 E-value=43 Score=35.31 Aligned_cols=148 Identities=17% Similarity=0.029 Sum_probs=85.8
Q ss_pred hhhccCHHHHHHHHHHHHHhCCCcc-------------cc----cccccchhhhhcccchhhhhccccchhhhccccchH
Q 008122 105 LVIMGNNTEFERAVLWLSENLNFDV-------------DA----RINLFECNIRVLGGLVSAHILATDSANRLVQGSYKN 167 (577)
Q Consensus 105 L~IMGl~~EF~~A~~~v~~~l~F~~-------------d~----~VsvFETtIR~LGGLLSAY~Ls~d~~~~~~~~~y~~ 167 (577)
..+|+-+++|++-.+|..+++.... ++ ..|--.-=+++.=+||=|..+=++.. + -..
T Consensus 79 Av~~~d~~~FD~l~~wt~~~l~~~~~~~~~L~aW~~~~~~~~~~~n~AtDgDl~IA~ALl~A~~~Wg~~~-----g-~~~ 152 (396)
T 1wu4_A 79 AVQMDRKDIFDRIWNWTMKNMYMTEGVHAGYFAWSCQPDGTKNSWGPAPDGEEYFALALFFASHRWGDGD-----E-QPF 152 (396)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTBCCSSTTTTSBCSEECTTSCBSCSCCCHHHHHHHHHHHHHHHHHHCCCS-----S-TTC
T ss_pred HHHcCCHHHHHHHHHHHHHHhccCCcccCCCceEEECCCCCcCCCCCCCHHHHHHHHHHHHHHHHhCCCC-----C-CcH
Confidence 4568999999999999998763321 11 23333444666666776666655210 0 001
Q ss_pred HHHHHHHHHHhhhccCC-CCCCCCccceeeccCCCC--CCCCCCccccccccchhhhhHH-HH---hhCCchHHHHHHHH
Q 008122 168 QLLTLAEDLGRRFLPAF-DTPTGLPYAWINLKYGVM--ENETNETSTSGCGSLILEMGAL-SR---LTGDPIYESAALRA 240 (577)
Q Consensus 168 ~LL~kA~dLadrLlpAF-dTptGiP~~~vNl~~g~~--~~~~~~t~lAe~GTl~LEF~~L-S~---lTGd~kY~~~a~ra 240 (577)
.++..|+.|.+.|+.-= ..+ |-| -+++..... ......+.++=. ..-|.++ ++ .++++.+.+++++.
T Consensus 153 ~Y~~~A~~il~~i~~~~~~~~-~~~--~l~p~~~~~~f~~~~~~~npSY~---~pa~~~~fa~~~~~~~~~~W~~~~~~~ 226 (396)
T 1wu4_A 153 NYSEQARKLLHTCVHNGEGGP-GHP--MWNRDNKLIKFIPEVEFSDPSYH---LPHFYELFSLWANEEDRVFWKEAAEAS 226 (396)
T ss_dssp CHHHHHHHHHHHHHHTTSSSS-CCC--SBCTTTCCBCSSTTCSEECGGGC---CHHHHHHHHHHSCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccCC-Ccc--eecCCCceeeecCCCCeeChhhc---cHHHHHHHHHhcccccChhHHHHHHHH
Confidence 57788888888877531 122 212 222222100 111122223222 2344444 55 77888999999998
Q ss_pred HHHHHhcc-CCCCCcceeeecCCCce
Q 008122 241 LRRLWSMR-SSLNLLGTTLDVTTGEW 265 (577)
Q Consensus 241 ~~~L~~~~-~~~gL~~~~id~~tG~~ 265 (577)
.+.|.+.. +..||+|..+..+ |++
T Consensus 227 ~~lL~~~~~~~tGL~PDw~~~d-g~~ 251 (396)
T 1wu4_A 227 REYLKIACHPETGLAPEYAYYD-GTP 251 (396)
T ss_dssp HHHHHHHSCTTTCCCCSSEETT-SSB
T ss_pred HHHHHhcccCCCCCCCceeeec-Ccc
Confidence 88887764 3579999999864 554
No 39
>2ljs_A Trypsin inhibitor 3; beta strand, helix, cyclic backbone, hydrolase inhibitor; HET: PCA; NMR {Momordica cochinchinensis}
Probab=60.49 E-value=4.1 Score=27.15 Aligned_cols=23 Identities=39% Similarity=1.081 Sum_probs=16.5
Q ss_pred CCcccCCCCccccccccccccccccceee
Q 008122 544 DHRCFGDEECGVDATTCRRRTCSMAGYCG 572 (577)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (577)
-.+|..|+||--. | -|-.|||||
T Consensus 8 lkkckrdsdcpge---c---ic~~~gycg 30 (30)
T 2ljs_A 8 LKKCRRDSDCPGE---C---ICKGNGYCG 30 (30)
T ss_dssp CCBCSSGGGSSTT---C---CBCTTSBBC
T ss_pred HHHhccccCCchh---h---eeccCcccC
Confidence 3467888888532 3 488999997
No 40
>1v5d_A Chitosanase; chitosan degradation, hydrolase, glycosil hydrolase, family 8; HET: PIN; 1.50A {Bacillus SP} SCOP: a.102.1.2 PDB: 1v5c_A*
Probab=49.72 E-value=2.4e+02 Score=29.30 Aligned_cols=141 Identities=12% Similarity=0.018 Sum_probs=78.6
Q ss_pred cCHHHHHHHHHHHHHhCCCccc----------c-----cccccchhhhhcccchhhhhccccchhhhccccchHHHHHHH
Q 008122 109 GNNTEFERAVLWLSENLNFDVD----------A-----RINLFECNIRVLGGLVSAHILATDSANRLVQGSYKNQLLTLA 173 (577)
Q Consensus 109 Gl~~EF~~A~~~v~~~l~F~~d----------~-----~VsvFETtIR~LGGLLSAY~Ls~d~~~~~~~~~y~~~LL~kA 173 (577)
+-+++|++-.+|..+++.=..+ + ..|--.-=+++.=+||=|..+=++. +.+ .++..|
T Consensus 92 ~d~~~FD~l~~wt~~~l~~~~~~L~aW~~~~~g~~~~d~n~AtDgDl~IA~ALl~A~~~Wg~~------g~~--~Y~~~A 163 (386)
T 1v5d_A 92 NAQKIYDGLFKTARTFKSSQNPNLMGWVVADSKKAQGHFDSATDGDLDIAYSLLLAHKQWGSN------GTV--NYLKEA 163 (386)
T ss_dssp THHHHHHHHHHHHHHTBCSSCTTSBCSEECSSGGGTTTSCCCHHHHHHHHHHHHHHHHHHCSS------SSS--CHHHHH
T ss_pred chHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCcCCCCCCCCHHHHHHHHHHHHHHHHcCCC------chH--hHHHHH
Confidence 5689999999999987651111 1 1222233345555555555554432 000 467778
Q ss_pred HHHHhhhccC-CCCCCCCccceeeccCCCCCCCCCCccccccccchhhhhHHHHhhCCchHHHHHHHHHHHHHhcc----
Q 008122 174 EDLGRRFLPA-FDTPTGLPYAWINLKYGVMENETNETSTSGCGSLILEMGALSRLTGDPIYESAALRALRRLWSMR---- 248 (577)
Q Consensus 174 ~dLadrLlpA-FdTptGiP~~~vNl~~g~~~~~~~~t~lAe~GTl~LEF~~LS~lTGd~kY~~~a~ra~~~L~~~~---- 248 (577)
+.|.+.|+.- ....+++.. +.....+ ....+.++-+ +.-=|..+.++||++.+.+++++..+.|.+..
T Consensus 164 ~~il~~i~~~~~~~~~~~l~----~g~~~~~-~~~~~npSY~--~p~~l~~f~~~~~~~~W~~v~~~~~~~l~~~~~~~~ 236 (386)
T 1v5d_A 164 QDMITKGIKASNVTNNNQLN----LGDWDSK-SSLDTRPSDW--MMSHLRAFYEFTGDKTWLTVINNLYDVYTQFSNKYS 236 (386)
T ss_dssp HHHHHHTHHHHHBCTTSSBC----SSTTSCT-TCCCBCGGGC--CHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcccCCCCeee----ecccCCC-CCCeechhhc--cHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhcC
Confidence 8888766542 222222211 1000000 1111222211 11337888899999999999988888876552
Q ss_pred CCCCCcceeeecCCCcee
Q 008122 249 SSLNLLGTTLDVTTGEWI 266 (577)
Q Consensus 249 ~~~gL~~~~id~~tG~~~ 266 (577)
+..||+|..+.. |.+.
T Consensus 237 ~~tGL~PDw~~~--g~~~ 252 (386)
T 1v5d_A 237 PNTGLISDFVVK--NPPQ 252 (386)
T ss_dssp TTTCCCCSSEET--TTTE
T ss_pred CCcCCCCcceec--CCcc
Confidence 458999999987 5443
No 41
>1wkx_A Hevein isoform 2; allergen, lectin, agglutinin-toxin motif; 1.70A {Hevea brasiliensis} PDB: 1hev_A 1q9b_A*
Probab=49.66 E-value=7.2 Score=28.66 Aligned_cols=22 Identities=41% Similarity=0.978 Sum_probs=16.7
Q ss_pred Ccccccc--ccccc-cccccceeee
Q 008122 552 ECGVDAT--TCRRR-TCSMAGYCGL 573 (577)
Q Consensus 552 ~~~~~~~--~~~~~-~~~~~~~~~~ 573 (577)
.||-.+. +|... -||..||||.
T Consensus 2 ~CG~~~gg~~Cp~~~CCS~~G~CGt 26 (43)
T 1wkx_A 2 QCGRQAGGKLCPDNLCCSQWGWCGS 26 (43)
T ss_dssp CSBGGGTTBCCSTTCEECTTSCEES
T ss_pred CcCCCCCCCcCCCCCccCccCccCC
Confidence 5776664 78766 6899999984
No 42
>3ren_A Glycosyl hydrolase, family 8; (alpha/alpha)6-barrel fold, alpha-amylase; 2.00A {Clostridium perfringens}
Probab=43.97 E-value=23 Score=37.01 Aligned_cols=67 Identities=13% Similarity=0.051 Sum_probs=52.0
Q ss_pred hHHHHHHHHHhcCChhHHHHHHHHHHHHHhhcccCCCccccccccccccCCcchhHHHHHHhHHHHHh
Q 008122 392 LAESTFYLYQATKDPWYLEVGESIVNSLNSYTKVDGGFASIRDVTTMQLEDHQHSFFLAETCKYLYLL 459 (577)
Q Consensus 392 ~iES~fyLyR~TgD~~Yre~gW~if~aiek~~r~~~Gya~i~dV~~~~~~D~meSFflAETLKYLYLL 459 (577)
.+.++....+.=+++.|++.|-+|.++|.++|-.++......|.... ..---.|||.=.+||.|+-.
T Consensus 119 IA~ALl~A~~~W~~~~Y~~~A~~I~~~i~~~~~~~g~l~~~~d~~~~-~~~ln~SY~~~~a~~~f~~~ 185 (350)
T 3ren_A 119 IIKALLLANNRWNSFYYKFYAINIANSLLKHAEENETLVDYIDNYGK-GNTTTLCYLDLPTMKLLSQV 185 (350)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEETTEECSEECSSCB-CSEEEGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHccccCcccCCCCccCC-CCEeehHhcCHHHHHHHHHh
Confidence 67888888888999999999999999999998776433333344433 33346899999999999965
No 43
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=42.07 E-value=44 Score=34.45 Aligned_cols=113 Identities=10% Similarity=-0.035 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHhhhcc-CCCCCCCCccce--eecc---CC-----CCCCCCCCccccccccchhhhhHHHHhhCCchHHH
Q 008122 167 NQLLTLAEDLGRRFLP-AFDTPTGLPYAW--INLK---YG-----VMENETNETSTSGCGSLILEMGALSRLTGDPIYES 235 (577)
Q Consensus 167 ~~LL~kA~dLadrLlp-AFdTptGiP~~~--vNl~---~g-----~~~~~~~~t~lAe~GTl~LEF~~LS~lTGd~kY~~ 235 (577)
+.+++.|++..+.++. .|+.++|.-++. +... ++ ...........+++ .+=+..+.+.|+|++|.+
T Consensus 226 ~~~~~~~~~~~~~l~~~~~~~~~g~~wp~g~~~~~~~~~~~~~~~~~~~~~WChG~~Gi---~~~l~~~~~~~~d~~~~~ 302 (409)
T 2g0d_A 226 EASLSALQKIIFIYEKFELERKKQFLWKDGLVADELKKEKVIREASFIRDAWCYGGPGI---SLLYLYGGLALDNDYFVD 302 (409)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGTTCCCSEECHHHHHHTSCCSCCSCCCCCSSSSHHHH---HHHHHHHHHHTTCHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHhcCCCCCcCCCccccHhhhcccccccCCCCCCcCCCCCHHH---HHHHHHHHHHcCCHHHHH
Confidence 3788888888888843 455555632222 2211 11 00111122223333 344566778999999999
Q ss_pred HHHHHHHHHHhccCCCCCcceeeecCCCceecccccccCCCchhhhhHHHHHHhcCchHHHHH
Q 008122 236 AALRALRRLWSMRSSLNLLGTTLDVTTGEWIEYSSGIGAGVDSFYEYLFKAHILFGKEDFWRM 298 (577)
Q Consensus 236 ~a~ra~~~L~~~~~~~gL~~~~id~~tG~~~~~~~~~Ga~~DSyYEYLlK~~iL~g~~~~~~m 298 (577)
.|+++.+.+|+.. ++ . ...++--|.-.-.+.|+..+-.++++++.+.
T Consensus 303 ~a~~~~~~~~~~~---~~------~-------~~~~LCHG~aG~~~~l~~l~~~~~~~~~~~~ 349 (409)
T 2g0d_A 303 KAEKILESAMQRK---LG------I-------DSYMICHGYSGLIEICSLFKRLLNTKKFDSY 349 (409)
T ss_dssp HHHHHHHHHHHHC---TT------C-------CSCCTTTSHHHHHHHHHHHHHHHCCCTTHHH
T ss_pred HHHHHHHHHHHhc---cC------C-------CCCCCCChHHHHHHHHHHHHHHhCCHHHHHH
Confidence 9999999999751 00 0 0111111222345778888888998765443
No 44
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=38.02 E-value=2e+02 Score=31.91 Aligned_cols=153 Identities=7% Similarity=0.040 Sum_probs=80.4
Q ss_pred cccchhhhhccccchhhhccccchHHHHHHHHHHHhhhccCCC-CCCCCccceeeccCCCCCCCCCCccccccccchhhh
Q 008122 143 LGGLVSAHILATDSANRLVQGSYKNQLLTLAEDLGRRFLPAFD-TPTGLPYAWINLKYGVMENETNETSTSGCGSLILEM 221 (577)
Q Consensus 143 LGGLLSAY~Ls~d~~~~~~~~~y~~~LL~kA~dLadrLlpAFd-TptGiP~~~vNl~~g~~~~~~~~t~lAe~GTl~LEF 221 (577)
+=|.+--|..|+|. .+|++|+++++.|..-|. .+.+-+ .+-+-..+..+. -. .|..|--.+-+
T Consensus 309 ~WAA~eLy~ATgd~-----------~YL~~a~~~a~~l~~~~~~~~~~g~-~w~~~d~~~r~~--~d--~a~~gl~~iaL 372 (586)
T 3h7l_A 309 LLASVELFKATKET-----------RYLEESRLWAQRLVARQMSDEQIQH-FWSANQDGSRPY--FH--AAEAGLPTIAL 372 (586)
T ss_dssp HHHHHHHHHHHCCH-----------HHHHHHHHHHHHHHTTEECCSSCSS-EEBSSSSSSSBC--CC--TTTTTHHHHHH
T ss_pred HHHHHHHHHHhCCH-----------HHHHHHHHHHHHHHHhccCCccCCC-cCCCcccCCccc--cc--ccccHHHHHHH
Confidence 34555667778887 899999999999998873 333322 222211121111 11 12333335556
Q ss_pred hHHHHhhCCchHHHHHHHHHHHHHh--------ccCCCCCcceee---ecCC--Cceec----ccccc-cCCCchhhh--
Q 008122 222 GALSRLTGDPIYESAALRALRRLWS--------MRSSLNLLGTTL---DVTT--GEWIE----YSSGI-GAGVDSFYE-- 281 (577)
Q Consensus 222 ~~LS~lTGd~kY~~~a~ra~~~L~~--------~~~~~gL~~~~i---d~~t--G~~~~----~~~~~-Ga~~DSyYE-- 281 (577)
.+|.++|+|+.+.+.+++.++.... ...+.|..-..+ +... +=++. ...-| |. .++.=
T Consensus 373 l~l~~~~~d~~~~~~a~~~i~~~~d~~l~~~~~~~npfg~~~~~~~~~~~~~~~~y~~p~~~~~~y~WqGs--N~~~an~ 450 (586)
T 3h7l_A 373 CEYLAIEDDSVQTESVKCIVNRACEFEIKISNKVTNPFGYPRQYVKGVNESKRDAFFVAHNNESGYWWQGE--NARLGSL 450 (586)
T ss_dssp HHHHHHCCSTTTTHHHHHHHHHHHHHHHHHHHSSCCSSCCCCEEECCTTSCCEEESSCCSSSTTSSCCCCC--HHHHHHH
T ss_pred HHhhhhcCChHHHHHHHHHHHHHhhhhhhhcccccCccccHHHHhhhhccccccccccccCCCCCCeeeCh--HHHHHHH
Confidence 7889999998777777665554332 122345433333 2110 00000 00112 22 12221
Q ss_pred --hHHHHHHhcCchHHHHHHHHHHHHHHHHhhcC
Q 008122 282 --YLFKAHILFGKEDFWRMFHSAYLAVQKYFRHG 313 (577)
Q Consensus 282 --YLlK~~iL~g~~~~~~m~~~a~~~i~k~l~~~ 313 (577)
-|+-.+-++++.....-|.+....-+.|++..
T Consensus 451 a~~~~~a~~~~~~~~~~~~y~~~a~~qldyiLG~ 484 (586)
T 3h7l_A 451 ATMAYLAQPHIASQEIQQQLSVFAQDALNWIVGL 484 (586)
T ss_dssp HHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHBTC
T ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHhhhhhccC
Confidence 12333445666556677888888888898753
No 45
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=38.01 E-value=68 Score=33.21 Aligned_cols=87 Identities=22% Similarity=0.225 Sum_probs=52.8
Q ss_pred HHhhhccCCCCCCC-CccceeeccCCCCCCCCCCccccccccchhhhhHHHHh---hCCchHHHHHHHHHHHHHhccCCC
Q 008122 176 LGRRFLPAFDTPTG-LPYAWINLKYGVMENETNETSTSGCGSLILEMGALSRL---TGDPIYESAALRALRRLWSMRSSL 251 (577)
Q Consensus 176 LadrLlpAFdTptG-iP~~~vNl~~g~~~~~~~~t~lAe~GTl~LEF~~LS~l---TGd~kY~~~a~ra~~~L~~~~~~~ 251 (577)
.||.|+ +|.+|+| =|+. ++..+-..........+-.-+.-..|...|.++ |++++|.++++|+++-|..++.+.
T Consensus 36 ~Ad~~l-~~Q~~~GGW~kn-~d~~~~~~~~~~~~~~t~DnddTa~vl~~Larv~~~~~~~~y~~Ai~Rgl~wlL~mQ~~n 113 (332)
T 1gxm_A 36 RADVVL-SYQQNNGGWPKN-LDYNSVGNGGGGNESGTIDNGATITEMVFLAEVYKSGGNTKYRDAVRKAANFLVNSQYST 113 (332)
T ss_dssp GHHHHH-HTCCTTSCCCSC-CCTTTCCCCCCCCSCEECGGGTTHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCTT
T ss_pred HHHHHH-HcCcCCCCCCcc-eecccccccCCCCCCCCccCccHHHHHHHHHHHhccccchHHHHHHHHHHHHHHhccCCC
Confidence 477777 5776664 5543 333221111111112222333344555666554 889999999999999999999998
Q ss_pred CCcceeeecCCCce
Q 008122 252 NLLGTTLDVTTGEW 265 (577)
Q Consensus 252 gL~~~~id~~tG~~ 265 (577)
|-+|.+ |+.++.+
T Consensus 114 GGWpqF-dpd~~~Y 126 (332)
T 1gxm_A 114 GALPQF-YPLKGGY 126 (332)
T ss_dssp SCCBSE-ESCCSGG
T ss_pred CCcccc-CCCcccc
Confidence 888864 4555444
No 46
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=35.37 E-value=84 Score=33.41 Aligned_cols=49 Identities=16% Similarity=0.182 Sum_probs=36.5
Q ss_pred cchhhhhHHHHh----h--CCchHHHHHHHHHHHHHhccCCCCCcceeeecCCCce
Q 008122 216 SLILEMGALSRL----T--GDPIYESAALRALRRLWSMRSSLNLLGTTLDVTTGEW 265 (577)
Q Consensus 216 Tl~LEF~~LS~l----T--Gd~kY~~~a~ra~~~L~~~~~~~gL~~~~id~~tG~~ 265 (577)
.-..|...|.++ | ++++|.+++.|+++-|..++...|-+|.+ |+.++.+
T Consensus 150 dTa~vl~aL~rv~~~~t~~~~~~y~~Ai~Rgl~wlL~mQ~~nGGWpqF-dpdn~~y 204 (408)
T 1r76_A 150 ATVTEIRFLAQVVSQLAPEEAAPYRDAALKGIEYLLASQFPNGGWPQV-WPLEGGY 204 (408)
T ss_dssp TTHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHSCTTSCCBSB-SSCCCGG
T ss_pred hHHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHHHccCCCCCCcCc-Ccccccc
Confidence 344555666553 6 89999999999999999999988877764 3444433
No 47
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=34.82 E-value=1.9e+02 Score=29.58 Aligned_cols=84 Identities=7% Similarity=-0.052 Sum_probs=48.1
Q ss_pred HhhC--CchHHHHHHHHHHHHHhccC--CCCC-cce-eeecC---C---CceecccccccCCCchhhhhHHHHHHhcCch
Q 008122 226 RLTG--DPIYESAALRALRRLWSMRS--SLNL-LGT-TLDVT---T---GEWIEYSSGIGAGVDSFYEYLFKAHILFGKE 293 (577)
Q Consensus 226 ~lTG--d~kY~~~a~ra~~~L~~~~~--~~gL-~~~-~id~~---t---G~~~~~~~~~Ga~~DSyYEYLlK~~iL~g~~ 293 (577)
..+| ++.|.++++++.+.+.+.+. ..|- +|. .+..+ + ........+|--|+-...--+++.+..++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~wp~g~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~d~ 298 (409)
T 2g0d_A 219 HIKGYSNEASLSALQKIIFIYEKFELERKKQFLWKDGLVADELKKEKVIREASFIRDAWCYGGPGISLLYLYGGLALDND 298 (409)
T ss_dssp HHHTCCCHHHHHHHHHHHHHHHHHCCCGGGTTCCCSEECHHHHHHTSCCSCCSCCCCCSSSSHHHHHHHHHHHHHHTTCH
T ss_pred HHhCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCCCccccHhhhcccccccCCCCCCcCCCCCHHHHHHHHHHHHHcCCH
Confidence 3565 99999999999999865432 2343 554 33210 0 0000112233233333445567888889998
Q ss_pred HHHHHHHHHHHHHHHH
Q 008122 294 DFWRMFHSAYLAVQKY 309 (577)
Q Consensus 294 ~~~~m~~~a~~~i~k~ 309 (577)
++.+.-..+.+.+.+.
T Consensus 299 ~~~~~a~~~~~~~~~~ 314 (409)
T 2g0d_A 299 YFVDKAEKILESAMQR 314 (409)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8777666666655553
No 48
>3qxf_A Endoglucanase; cellulase, GH8, cellulose synthesis, cellulose degradation,; 1.85A {Escherichia coli k-12} PDB: 3qxq_A*
Probab=30.79 E-value=3.2e+02 Score=28.34 Aligned_cols=136 Identities=15% Similarity=0.165 Sum_probs=76.2
Q ss_pred hhhccCHHHHHHHHHHHHHhCCCc--------------ccccccccchh------hhhcccchhhhhccccchhhhcccc
Q 008122 105 LVIMGNNTEFERAVLWLSENLNFD--------------VDARINLFECN------IRVLGGLVSAHILATDSANRLVQGS 164 (577)
Q Consensus 105 L~IMGl~~EF~~A~~~v~~~l~F~--------------~d~~VsvFETt------IR~LGGLLSAY~Ls~d~~~~~~~~~ 164 (577)
..+|+.+++|++-.+|..+++.-. .++...|-..| +++-=+||=|..+=+++
T Consensus 43 Av~~~dr~~FD~Lw~wt~~~l~~~d~~~~L~aW~w~~~~~g~~~v~D~nsAtDGDl~IA~ALl~A~~~Wg~~-------- 114 (355)
T 3qxf_A 43 ALAANDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDVWMAWSLLEAGRLWKEQ-------- 114 (355)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHSTTCTTTSCCCSEEEECTTSCEEEEECSCCHHHHHHHHHHHHHHHHHTTCH--------
T ss_pred HHHhCCHHHHHHHHHHHHHHhccCCcccCCceEEEcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCH--------
Confidence 356899999999999999877522 11222232322 44444555555554544
Q ss_pred chHHHHHHHHHHHhhhccCCC-CCCC-----CccceeeccCCCCCCCCCCccccccccchhhhhHHHHhhCCchHHHHHH
Q 008122 165 YKNQLLTLAEDLGRRFLPAFD-TPTG-----LPYAWINLKYGVMENETNETSTSGCGSLILEMGALSRLTGDPIYESAAL 238 (577)
Q Consensus 165 y~~~LL~kA~dLadrLlpAFd-TptG-----iP~~~vNl~~g~~~~~~~~t~lAe~GTl~LEF~~LS~lTGd~kY~~~a~ 238 (577)
.++..|+.|++.|+.-=- ..+| +|-. + |-.+.....++++= +.+-+.++-... ++.+.++++
T Consensus 115 ---~Y~~~A~~il~~I~~~~v~~~~g~~~~LlpG~-~----gF~~~~~~~~nPSY---~~p~~~~~fa~~-~~~W~~l~~ 182 (355)
T 3qxf_A 115 ---RYTDIGSALLKRIAREEVVTVPGLGSMLLPGK-V----GFAEDNSWRFNPSY---LPPTLAQYFTRF-GAPWTTLRE 182 (355)
T ss_dssp ---HHHHHHHHHHHHHHHHHEEEETTTEEEECSSS-S----SSEETTEEEECTTS---SCHHHHHHHGGG-CTTHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHhccccCCCCceeecCcc-c----CccCCCCCeechhh---ccHHHHHHHHHh-CChHHHHHH
Confidence 677888888877765211 1112 2211 0 00001011112222 223333333333 888889888
Q ss_pred HHHHHHHhccCCCCCcceeeecC
Q 008122 239 RALRRLWSMRSSLNLLGTTLDVT 261 (577)
Q Consensus 239 ra~~~L~~~~~~~gL~~~~id~~ 261 (577)
+..+.|.+.. ..||+|..+..+
T Consensus 183 ~~~~lL~~~~-~tGL~PDwv~~~ 204 (355)
T 3qxf_A 183 TNQRLLLETA-PKGFSPDWVRYE 204 (355)
T ss_dssp HHHHHHHHTC-TTSCCCSSEEEE
T ss_pred HHHHHHHHhh-hcCCCCceEEec
Confidence 8888887764 789999988765
No 49
>1wgn_A UBAP1, ubiquitin associated protein; ubiquitin associated protein 1 (UBAP1), UBA domain, structural genomics; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=30.71 E-value=21 Score=28.24 Aligned_cols=30 Identities=20% Similarity=0.266 Sum_probs=23.9
Q ss_pred eeeeccchhhhccCHHH------------HHHHHHHHHHhCC
Q 008122 97 TLIESMSSLVIMGNNTE------------FERAVLWLSENLN 126 (577)
Q Consensus 97 TLVDSLDTL~IMGl~~E------------F~~A~~~v~~~l~ 126 (577)
+=-++++||.-||..++ .++|++|+..|.|
T Consensus 18 se~e~V~~LvsMGFs~~qA~kALKat~~NvErAaDWLFSH~D 59 (63)
T 1wgn_A 18 SERQCVETVVNMGYSYECVLRAMKKKGENIEQILDYLFAHSG 59 (63)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHCSCHHHHHHHHHHHSC
T ss_pred chHHHHHHHHHcCCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 34567899999999875 5689999988765
No 50
>1mct_I Trypsin inhibitor A; complex(proteinase/inhibitor); 1.60A {Momordica charantia} SCOP: g.3.2.1 PDB: 1f2s_I
Probab=30.68 E-value=18 Score=24.08 Aligned_cols=21 Identities=33% Similarity=0.866 Sum_probs=14.2
Q ss_pred CcccCCCCccccccccccccccccceee
Q 008122 545 HRCFGDEECGVDATTCRRRTCSMAGYCG 572 (577)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (577)
-+|..|+||= +.-.|-+ ||||
T Consensus 8 m~Ck~DsDCl------~~C~C~~-G~CG 28 (28)
T 1mct_I 8 MECTRDSDCM------AKCICVA-GHCG 28 (28)
T ss_dssp CBCSSGGGSS------TTCCEET-TEEC
T ss_pred hhcccccccc------cCCEecc-cccC
Confidence 4566777774 4446777 9997
No 51
>2po8_A Mcoti-II; oxidative folding intermediate, plant protein; NMR {Momordica cochinchinensis} SCOP: g.3.2.1
Probab=29.18 E-value=23 Score=24.45 Aligned_cols=24 Identities=33% Similarity=0.772 Sum_probs=17.1
Q ss_pred CCcccCCCCccccccccccccccccceeee
Q 008122 544 DHRCFGDEECGVDATTCRRRTCSMAGYCGL 573 (577)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (577)
--+|..|+||=-+ -.|-++||||.
T Consensus 5 lM~CK~DsDCl~~------CiC~~~G~CG~ 28 (34)
T 2po8_A 5 LKKCRRDSDCPGA------CICRGNGYCGS 28 (34)
T ss_dssp CCBCSSGGGSCTT------EEECTTSBEEE
T ss_pred ceecccccCcccC------CeEccCccccc
Confidence 3467788888543 35888999985
No 52
>3ren_A Glycosyl hydrolase, family 8; (alpha/alpha)6-barrel fold, alpha-amylase; 2.00A {Clostridium perfringens}
Probab=28.34 E-value=1.9e+02 Score=30.04 Aligned_cols=138 Identities=14% Similarity=0.051 Sum_probs=86.4
Q ss_pred hhhccCHHHHHHHHHHHHHhCCCcccc------------cccccchhhhhcccchhhhhccccchhhhccccchHHHHHH
Q 008122 105 LVIMGNNTEFERAVLWLSENLNFDVDA------------RINLFECNIRVLGGLVSAHILATDSANRLVQGSYKNQLLTL 172 (577)
Q Consensus 105 L~IMGl~~EF~~A~~~v~~~l~F~~d~------------~VsvFETtIR~LGGLLSAY~Ls~d~~~~~~~~~y~~~LL~k 172 (577)
+...|.++.|++-.+|..+++. + ++ .+|.-..=+|+.-.||=|...=+++ .+...
T Consensus 72 av~~~d~~~Fd~l~~~t~~~l~-~-~~L~sWr~~~~~~~~nNAtdgDl~IA~ALl~A~~~W~~~-----------~Y~~~ 138 (350)
T 3ren_A 72 SVNANNKELFDEHFDIVKEMRL-K-NGLISWRKEGDENSPSSATIDELRIIKALLLANNRWNSF-----------YYKFY 138 (350)
T ss_dssp HHHTTCHHHHHHHHHHHHTTBC-T-TSSBCSEEETTEECSCEEHHHHHHHHHHHHHHHHHHCCH-----------HHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHhc-c-CCceEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHcCcH-----------HHHHH
Confidence 4456899999999999998776 3 21 2343344477777777777776666 67788
Q ss_pred HHHHHhhhccCCCCCCCCccceeeccCCCCCCCCCCccccccccchhhhhHHHHhhCCchHHHHHHHHHHHHHhccCC--
Q 008122 173 AEDLGRRFLPAFDTPTGLPYAWINLKYGVMENETNETSTSGCGSLILEMGALSRLTGDPIYESAALRALRRLWSMRSS-- 250 (577)
Q Consensus 173 A~dLadrLlpAFdTptGiP~~~vNl~~g~~~~~~~~t~lAe~GTl~LEF~~LS~lTGd~kY~~~a~ra~~~L~~~~~~-- 250 (577)
|+.++..|+. ....+|......+..++ ....+++=+ +.-=|..|.++ ++...+++++.++.|.+....
T Consensus 139 A~~I~~~i~~-~~~~~g~l~~~~d~~~~-----~~~ln~SY~--~~~a~~~f~~~--~~~W~~l~~~g~~lL~~g~p~D~ 208 (350)
T 3ren_A 139 AINIANSLLK-HAEENETLVDYIDNYGK-----GNTTTLCYL--DLPTMKLLSQV--DKKWEGIYEKSNSIIENGKISEE 208 (350)
T ss_dssp HHHHHHHHHH-HHEETTEECSEECSSCB-----CSEEEGGGC--CHHHHHHHHHH--CTHHHHHHHHHHHHHHTTBCCSS
T ss_pred HHHHHHHHHH-HccccCcccCCCCccCC-----CCEeehHhc--CHHHHHHHHHh--cchHHHHHHHHHHHHHhCCCCcc
Confidence 8888877775 22223433333333221 111112111 12235667777 588899999999988873322
Q ss_pred CCCcceeeecCCCce
Q 008122 251 LNLLGTTLDVTTGEW 265 (577)
Q Consensus 251 ~gL~~~~id~~tG~~ 265 (577)
.+|+|...++.++++
T Consensus 209 ~~l~~~~~~~~~~~y 223 (350)
T 3ren_A 209 VPLYRKVFYEETQKY 223 (350)
T ss_dssp SCCBCSEEETTTTEE
T ss_pred cccCCcccccCCCCc
Confidence 468888888877655
No 53
>1h12_A Endo-1,4-beta-xylanase; hydrolase, xylan degradation, psychrophilic, cold adaptation, temperature, glycosyl hydrolase, family 8; HET: XYP XYS; 1.2A {Pseudoalteromonas haloplanktis} SCOP: a.102.1.2 PDB: 1h13_A 1xw2_A 1xwq_A* 1h14_A 1xwt_A 2b4f_A* 2a8z_A*
Probab=27.65 E-value=1.5e+02 Score=31.16 Aligned_cols=138 Identities=14% Similarity=0.049 Sum_probs=78.7
Q ss_pred hhhccCHHHHHHHHHHHHHhC----CCc---------------ccccc------cccchhhhhcccchhhhhccccchhh
Q 008122 105 LVIMGNNTEFERAVLWLSENL----NFD---------------VDARI------NLFECNIRVLGGLVSAHILATDSANR 159 (577)
Q Consensus 105 L~IMGl~~EF~~A~~~v~~~l----~F~---------------~d~~V------svFETtIR~LGGLLSAY~Ls~d~~~~ 159 (577)
.++|+.+++|++-.+|..+++ ... .++.| |--.-=+++-=+||=|..+=++.
T Consensus 87 Av~~~dr~~FD~L~~wtk~~l~~~~~~~~g~~~~l~aW~~g~~~~g~~~d~n~~sAtDgDl~IA~ALl~A~~~Wg~~--- 163 (405)
T 1h12_A 87 AVMLNKQEEFDNLWRFAKAYQKNPDNHPDAKKQGVYAWKLKLNQNGFVYKVDEGPAPDGEEYFAFALLNASARWGNS--- 163 (405)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTBCCTTCSSGGGTTCBEEEEEECTTSCEEEEEEEECHHHHHHHHHHHHHHHHHHCSS---
T ss_pred HHHcCCHHHHHHHHHHHHHHhccccccccCCcccceEEEeccCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHcCCC---
Confidence 456899999999999999887 111 12221 11111255555566665554421
Q ss_pred hccccchHHHHHHHHHHHhhhccCCCCCCCCccc-eeeccCCCCCCCCCCccccccccchhhhhH-HHHhhCC----chH
Q 008122 160 LVQGSYKNQLLTLAEDLGRRFLPAFDTPTGLPYA-WINLKYGVMENETNETSTSGCGSLILEMGA-LSRLTGD----PIY 233 (577)
Q Consensus 160 ~~~~~y~~~LL~kA~dLadrLlpAFdTptGiP~~-~vNl~~g~~~~~~~~t~lAe~GTl~LEF~~-LS~lTGd----~kY 233 (577)
+ ...++..|+.|.+.|+.-= |-. .+.+..+. ...+.++- +.+-|.+ +++.|++ +.+
T Consensus 164 ---g--~~~Y~~~A~~il~~I~~~~------~~~~~~~f~p~~----~~~~npSY---~~pa~~~~fa~~~~~~~~~~~W 225 (405)
T 1h12_A 164 ---G--EFNYYNDAITMLNTIKNKL------MENQIIRFSPYI----DNLTDPSY---HIPAFYDYFANNVTNQADKNYW 225 (405)
T ss_dssp ---S--SCCHHHHHHHHHHHHHHHS------EETTEECSCTTC----SSCBCGGG---CCHHHHHHHHHHCSSHHHHHHH
T ss_pred ---C--chhHHHHHHHHHHHHHHhC------CCCCeeEEecCC----CCeeChhh---cCHHHHHHHHHhcccccCchhH
Confidence 0 0156777888777776531 211 12221111 11222222 2344444 4888988 778
Q ss_pred HHHHHHHHHHHHhccC-CCC----Ccceeee-cCCCc
Q 008122 234 ESAALRALRRLWSMRS-SLN----LLGTTLD-VTTGE 264 (577)
Q Consensus 234 ~~~a~ra~~~L~~~~~-~~g----L~~~~id-~~tG~ 264 (577)
.+++++..+.|.+... ..| |+|..+. .+ |+
T Consensus 226 ~~v~~~~~~lL~~~~~~~tG~~~~L~PDw~~~~d-g~ 261 (405)
T 1h12_A 226 RQVATKSRTLLKNHFTKVSGSPHWNLPTFLSRLD-GS 261 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHSSTTTTTCCCSCBCTT-SC
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCchhHHhcC-CC
Confidence 8888888877765543 378 9999888 54 54
No 54
>2b4j_C PC4 and SFRS1 interacting protein; HIV, integration, transcription, viral protein, recombinatio; 2.02A {Homo sapiens} SCOP: a.48.4.1 PDB: 3f9k_C 3hpg_G 3u88_C* 3hph_E
Probab=25.75 E-value=51 Score=28.25 Aligned_cols=47 Identities=15% Similarity=0.116 Sum_probs=32.1
Q ss_pred hhhHHHHHHHHHhcCChhHHHHHHHHHHHHHhhcccCCCcccccccc
Q 008122 390 PELAESTFYLYQATKDPWYLEVGESIVNSLNSYTKVDGGFASIRDVT 436 (577)
Q Consensus 390 PE~iES~fyLyR~TgD~~Yre~gW~if~aiek~~r~~~Gya~i~dV~ 436 (577)
||.|+.+==+.|..|+...|+.|-.++..+....-++-|..-+.+|.
T Consensus 50 pe~V~t~kklRry~g~q~Ir~kA~~iY~kfK~~f~~~eg~~~~~~~~ 96 (98)
T 2b4j_C 50 TEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVITQVL 96 (98)
T ss_dssp HHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHC--------------
T ss_pred hHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHhcCCCchHHHHHh
Confidence 89999999999999999999999999999999999998988877764
No 55
>3eu8_A Putative glucoamylase; YP_210071.1, structural genomics, JOI for structural genomics, JCSG; 2.12A {Bacteroides fragilis nctc 9343}
Probab=24.89 E-value=1.5e+02 Score=31.77 Aligned_cols=94 Identities=12% Similarity=0.037 Sum_probs=54.1
Q ss_pred HHHHHHHHHHhhhccCCCC-CCCCccceeeccCCCCCCCCCCccccccccchhhhhHHHHhhCCc-------hHHHHHHH
Q 008122 168 QLLTLAEDLGRRFLPAFDT-PTGLPYAWINLKYGVMENETNETSTSGCGSLILEMGALSRLTGDP-------IYESAALR 239 (577)
Q Consensus 168 ~LL~kA~dLadrLlpAFdT-ptGiP~~~vNl~~g~~~~~~~~t~lAe~GTl~LEF~~LS~lTGd~-------kY~~~a~r 239 (577)
.+|++-..=.=+-.-.|-+ .+|+|..++......+.+....++++.+| |.-+|-+.+-. .-.+..++
T Consensus 20 ~~L~~~~r~T~~yF~~~~~p~~gL~~Dn~~~~~~~p~~~a~~tS~tniG-----fgL~A~~vA~e~G~I~r~ea~~R~~~ 94 (430)
T 3eu8_A 20 ALMDTVQRRTFNYFWDAAEPNSGLARERYHMDGEYPAGGPEIVTSGGSG-----FGIMAILAGIDRGYVSREEGLRRMEK 94 (430)
T ss_dssp HHHHHHHHHHHHHHHTSSCTTTCCCBSEEETTCCCTTSCTTEEEHHHHH-----HHHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCcCCCCCCCccccCCCCCCCCCccCCHHHH-----HHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 5555433333333334433 47999888775421121222345666666 55555544322 22334445
Q ss_pred HHHHHHhccCCCCCcceeeecCCCcee
Q 008122 240 ALRRLWSMRSSLNLLGTTLDVTTGEWI 266 (577)
Q Consensus 240 a~~~L~~~~~~~gL~~~~id~~tG~~~ 266 (577)
+++.|.+.....|.+++.+|.+||+..
T Consensus 95 tL~~l~~~~r~~G~fyhwyD~~Tg~~l 121 (430)
T 3eu8_A 95 IVGFLEKADRFKGAYPHWWNGETGHVQ 121 (430)
T ss_dssp HHHHHHHSCCBTTBCCSEEETTTCCBC
T ss_pred HHHHHHhchhcCCcCccccCCCCCCcC
Confidence 666667766678999999999999854
No 56
>2lb7_A WAMP-1A, antimicrobial peptide 1A; antimicrobial protein; NMR {Triticum kiharae}
Probab=23.66 E-value=30 Score=25.50 Aligned_cols=22 Identities=32% Similarity=0.937 Sum_probs=16.1
Q ss_pred Ccccc--ccccccc-cccccceeee
Q 008122 552 ECGVD--ATTCRRR-TCSMAGYCGL 573 (577)
Q Consensus 552 ~~~~~--~~~~~~~-~~~~~~~~~~ 573 (577)
.||-. ..+|... -||..||||.
T Consensus 3 ~CG~~~~g~~C~~g~CCS~~G~CG~ 27 (44)
T 2lb7_A 3 RCGDQARGAKCPNCLCCGKYGFCGS 27 (44)
T ss_dssp ECBGGGTTBCCCTTCEEETTTEEEC
T ss_pred CccCCCCCccCCCCCccCCCCccCC
Confidence 46665 4577766 5899999984
No 57
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=22.19 E-value=60 Score=35.27 Aligned_cols=100 Identities=14% Similarity=0.123 Sum_probs=68.7
Q ss_pred cccccchhhhhcccchhhhhccccchhhhccccchHHHHHHHHHHHhhh-ccCCCCCCCCccceeeccCCCCCCCCCCcc
Q 008122 132 RINLFECNIRVLGGLVSAHILATDSANRLVQGSYKNQLLTLAEDLGRRF-LPAFDTPTGLPYAWINLKYGVMENETNETS 210 (577)
Q Consensus 132 ~VsvFETtIR~LGGLLSAY~Ls~d~~~~~~~~~y~~~LL~kA~dLadrL-lpAFdTptGiP~~~vNl~~g~~~~~~~~t~ 210 (577)
.+.-|..---||=.++-||.+++|+ .|...|..++.++ +-.++++.| --..||.++.
T Consensus 368 vl~~~p~~~~yll~~vra~~~s~D~-----------~Lw~~~~~ma~~~~lgdi~~~~~-~~~~~~~~~~---------- 425 (543)
T 2v8i_A 368 VLKPYKAGNEFLISYARAYAIDNDP-----------LLWKVARGIANDQGLGDIGTAPG-KEVKVNMDTT---------- 425 (543)
T ss_dssp EECCEECCHHHHHHHHHHHHHSCCH-----------HHHHHHHHHHHHTTCEECTTBTT-BSCEECTTCC----------
T ss_pred eeccccCCchhhHHHHHHHHcCCCH-----------HHHHHHHHHHhhCCccccCCCcC-cccccccCCC----------
Confidence 4566666666777888999999998 8999999988875 333444322 1223443321
Q ss_pred ccccccchhhhhHHHHhhCCchHHHHHHHHHHHHHhccCCCCCc
Q 008122 211 TSGCGSLILEMGALSRLTGDPIYESAALRALRRLWSMRSSLNLL 254 (577)
Q Consensus 211 lAe~GTl~LEF~~LS~lTGd~kY~~~a~ra~~~L~~~~~~~gL~ 254 (577)
.++. =+.+-...|.+.|++++|..+|+++-+.|.+.+-..||+
T Consensus 426 ~~sp-~lL~allEL~~atq~~~~l~lA~~~g~nl~~~~~~~G~F 468 (543)
T 2v8i_A 426 NSDP-YALFALLDLYHASQVADYRKLAEKIGDNIIKIRYIDGFF 468 (543)
T ss_dssp CCCH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEETTEE
T ss_pred CcCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcCcee
Confidence 1111 134556778999999999999999999999866556654
Done!