Query 008124
Match_columns 577
No_of_seqs 259 out of 1517
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 18:41:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008124.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008124hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1u6z_A Exopolyphosphatase; alp 100.0 4E-104 1E-108 870.3 56.6 498 11-561 9-510 (513)
2 3hi0_A Putative exopolyphospha 100.0 1E-100 4E-105 841.2 45.5 488 11-556 13-507 (508)
3 3mdq_A Exopolyphosphatase; str 100.0 7.1E-69 2.4E-73 555.9 37.7 303 13-332 4-311 (315)
4 3cer_A Possible exopolyphospha 100.0 1.2E-66 4.2E-71 544.4 31.9 311 5-331 8-339 (343)
5 1t6c_A Exopolyphosphatase; alp 100.0 3.3E-65 1.1E-69 527.9 34.3 296 13-331 12-311 (315)
6 3rf0_A Exopolyphosphatase; str 100.0 1.1E-39 3.8E-44 317.9 19.4 192 340-558 3-198 (209)
7 3aap_A Ectonucleoside triphosp 100.0 3.6E-29 1.2E-33 261.9 13.0 154 13-177 3-178 (353)
8 3cj1_A Ectonucleoside triphosp 99.9 3.1E-24 1E-28 231.1 13.9 149 13-164 34-211 (456)
9 3zx3_A Ectonucleoside triphosp 99.8 1.6E-19 5.5E-24 193.0 15.0 148 14-164 34-202 (452)
10 3h1q_A Ethanolamine utilizatio 99.7 5.5E-17 1.9E-21 163.5 16.3 153 11-183 26-179 (272)
11 2ych_A Competence protein PILM 98.3 1.7E-05 5.8E-10 83.0 16.6 71 112-183 161-231 (377)
12 4a2a_A Cell division protein F 98.2 3.6E-05 1.2E-09 82.1 17.3 39 144-182 207-245 (419)
13 4a57_A Nucleoside-triphosphata 98.1 1.3E-05 4.3E-10 85.9 12.0 74 88-161 158-265 (611)
14 2pq7_A Predicted HD superfamil 97.6 0.00038 1.3E-08 67.3 11.1 99 359-490 34-136 (220)
15 4gni_A Putative heat shock pro 97.4 0.0024 8.2E-08 67.3 15.0 76 106-182 168-249 (409)
16 3tm8_A BD1817, uncharacterized 97.0 0.0023 7.9E-08 65.8 9.9 102 361-490 169-289 (328)
17 3ccg_A HD superfamily hydrolas 96.8 0.0025 8.5E-08 60.1 8.0 93 361-493 22-137 (190)
18 3b57_A LIN1889 protein; Q92AN1 96.8 0.0051 1.7E-07 58.9 9.8 77 360-455 27-103 (209)
19 2o08_A BH1327 protein; putativ 96.7 0.0053 1.8E-07 57.7 9.5 93 361-493 21-135 (188)
20 2d0o_A DIOL dehydratase-reacti 96.7 0.0054 1.8E-07 66.1 10.2 77 103-182 370-446 (610)
21 1k8k_A ARP3, actin-like protei 96.6 0.011 3.8E-07 62.4 12.0 98 82-182 101-204 (418)
22 2qgs_A Protein Se1688; alpha-h 96.5 0.014 4.6E-07 56.6 10.9 79 359-456 26-104 (225)
23 1nbw_A Glycerol dehydratase re 96.5 0.0061 2.1E-07 65.9 9.0 76 104-182 373-448 (607)
24 3dto_A BH2835 protein; all alp 96.5 0.0097 3.3E-07 57.6 9.7 78 359-455 26-103 (223)
25 3qfu_A 78 kDa glucose-regulate 96.5 0.031 1.1E-06 58.1 14.5 109 70-182 136-250 (394)
26 2ogi_A Hypothetical protein SA 96.5 0.0072 2.5E-07 57.2 8.5 94 360-493 28-143 (196)
27 2pjq_A Uncharacterized protein 96.4 0.006 2E-07 59.4 7.4 78 359-455 31-108 (231)
28 2fxu_A Alpha-actin-1, actin, a 96.3 0.026 8.8E-07 58.8 12.4 93 81-182 93-189 (375)
29 3i33_A Heat shock-related 70 k 96.2 0.049 1.7E-06 57.0 14.1 110 70-182 141-258 (404)
30 3djb_A Hydrolase, HD family; a 95.9 0.014 4.6E-07 56.6 7.2 78 359-455 26-103 (223)
31 2v7y_A Chaperone protein DNAK; 95.9 0.14 4.8E-06 55.6 16.0 108 69-182 91-205 (509)
32 1yuw_A Heat shock cognate 71 k 95.7 0.13 4.4E-06 56.5 15.2 108 69-182 121-237 (554)
33 1jce_A ROD shape-determining p 95.7 0.096 3.3E-06 53.5 13.3 76 103-183 111-187 (344)
34 1dkg_D Molecular chaperone DNA 95.6 0.098 3.3E-06 54.2 13.2 109 70-182 118-236 (383)
35 2zgy_A Plasmid segregation pro 95.1 0.2 6.8E-06 50.7 12.9 96 83-182 90-206 (320)
36 2fsj_A Hypothetical protein TA 94.8 0.038 1.3E-06 56.9 6.7 62 117-181 165-232 (346)
37 3gw7_A Uncharacterized protein 94.6 0.0088 3E-07 58.5 1.2 76 361-455 28-110 (239)
38 2qm1_A Glucokinase; alpha-beta 94.6 0.71 2.4E-05 46.4 15.5 141 4-168 2-159 (326)
39 3hc1_A Uncharacterized HDOD do 94.0 0.077 2.6E-06 53.6 6.8 95 361-493 121-245 (305)
40 4apw_A ALP12; actin-like prote 94.0 0.047 1.6E-06 55.9 5.2 42 142-183 171-214 (329)
41 3qb0_A Actin-related protein 4 93.8 0.22 7.4E-06 53.9 10.3 151 15-182 25-203 (498)
42 1hux_A Activator of (R)-2-hydr 93.7 0.66 2.2E-05 45.8 12.8 115 14-166 4-119 (270)
43 2q14_A Phosphohydrolase; BT420 93.3 0.11 3.9E-06 54.6 6.8 59 361-429 58-126 (410)
44 3js6_A Uncharacterized PARM pr 92.6 0.1 3.5E-06 54.0 5.1 64 117-182 156-225 (355)
45 4ehu_A Activator of 2-hydroxyi 92.5 1.8 6E-05 42.5 13.9 113 14-165 2-116 (276)
46 3sk9_A Putative uncharacterize 92.4 0.15 5.2E-06 50.5 5.8 88 361-458 28-148 (265)
47 1zc6_A Probable N-acetylglucos 92.4 2.1 7.3E-05 42.6 14.6 130 12-166 10-145 (305)
48 3u1n_A SAM domain and HD domai 92.1 0.27 9.3E-06 53.0 7.7 46 361-414 68-113 (528)
49 2hek_A Hypothetical protein; p 91.9 0.3 1E-05 50.8 7.6 76 361-453 53-142 (371)
50 4b9q_A Chaperone protein DNAK; 91.9 0.95 3.2E-05 50.1 12.1 109 69-182 117-236 (605)
51 3zyy_X Iron-sulfur cluster bin 91.2 0.99 3.4E-05 49.9 11.1 158 16-176 209-402 (631)
52 3d2f_A Heat shock protein homo 91.1 1.8 6.1E-05 48.6 13.5 111 68-182 119-241 (675)
53 1k8k_B ARP2, actin-like protei 90.8 0.13 4.6E-06 53.7 3.7 92 83-182 99-193 (394)
54 3irh_A HD domain protein; phos 90.7 0.3 1E-05 52.1 6.2 67 361-430 89-163 (480)
55 2ch5_A NAGK protein; transfera 90.4 3.2 0.00011 41.9 13.7 140 14-176 7-152 (347)
56 2ews_A Pantothenate kinase; PA 90.2 7.8 0.00027 38.5 15.8 128 11-182 18-148 (287)
57 4fo0_A Actin-related protein 8 89.5 2.8 9.5E-05 45.9 13.1 110 65-182 170-287 (593)
58 2kho_A Heat shock protein 70; 88.7 1.8 6.1E-05 47.9 10.8 107 69-181 117-235 (605)
59 2hoe_A N-acetylglucosamine kin 87.8 9.5 0.00032 39.2 15.2 134 13-167 87-236 (380)
60 3dwl_A Actin-related protein 3 87.6 2 6.7E-05 45.4 9.9 100 81-183 116-221 (427)
61 1vqr_A Hypothetical protein CJ 87.4 0.92 3.2E-05 45.3 6.9 38 361-415 127-164 (297)
62 2dqb_A Deoxyguanosinetriphosph 87.0 1.4 4.8E-05 45.7 8.1 52 361-430 78-145 (376)
63 3i7a_A Putative metal-dependen 86.7 1.7 5.8E-05 43.0 8.3 98 361-491 120-238 (281)
64 1z05_A Transcriptional regulat 85.7 14 0.00046 38.7 15.2 135 13-167 108-258 (429)
65 3vgl_A Glucokinase; ROK family 84.6 6.9 0.00024 39.1 11.8 131 13-167 2-146 (321)
66 1z6r_A MLC protein; transcript 84.5 12 0.0004 38.8 13.9 134 13-166 85-235 (406)
67 3r8e_A Hypothetical sugar kina 82.0 10 0.00035 37.9 11.8 134 13-167 19-168 (321)
68 4e1j_A Glycerol kinase; struct 81.8 5.3 0.00018 43.2 10.2 77 11-96 24-103 (520)
69 4am6_A Actin-like protein ARP8 81.5 5.7 0.0002 43.9 10.2 112 64-182 191-311 (655)
70 1saz_A Probable butyrate kinas 80.0 6.3 0.00022 40.7 9.6 140 14-168 3-200 (381)
71 1zbs_A Hypothetical protein PG 79.9 22 0.00077 34.8 13.4 128 15-166 2-132 (291)
72 4db3_A Glcnac kinase, N-acetyl 79.1 22 0.00074 35.6 13.2 133 14-167 25-170 (327)
73 3ifr_A Carbohydrate kinase, FG 77.9 5.8 0.0002 42.7 8.9 75 13-96 7-84 (508)
74 2ivn_A O-sialoglycoprotein end 77.8 60 0.0021 32.5 17.6 148 15-180 3-159 (330)
75 3ezw_A Glycerol kinase; glycer 77.5 5.8 0.0002 42.9 8.7 77 12-97 3-82 (526)
76 2yhw_A Bifunctional UDP-N-acet 77.1 32 0.0011 34.4 13.8 134 13-167 30-181 (343)
77 2pgs_A Putative deoxyguanosine 76.6 2.7 9.4E-05 44.6 5.6 46 361-413 65-113 (451)
78 3ljx_A MMOQ response regulator 76.4 6.6 0.00023 38.8 8.2 38 361-415 111-148 (288)
79 4bc3_A Xylulose kinase; transf 75.8 6.7 0.00023 42.5 8.7 77 13-96 10-98 (538)
80 3g25_A Glycerol kinase; IDP007 75.1 9.6 0.00033 40.8 9.6 74 13-95 6-82 (501)
81 3m1t_A Putative phosphohydrola 75.1 5.3 0.00018 39.2 7.0 38 361-416 108-145 (275)
82 3epq_A Putative fructokinase; 74.5 37 0.0013 33.6 13.2 127 12-167 2-147 (302)
83 3mem_A Putative signal transdu 74.4 11 0.00039 39.9 9.8 65 107-171 57-124 (457)
84 3htv_A D-allose kinase, alloki 73.6 20 0.00067 35.7 11.0 133 13-167 7-156 (310)
85 2ap1_A Putative regulator prot 73.2 47 0.0016 32.9 13.7 133 13-167 24-170 (327)
86 3djc_A Type III pantothenate k 73.1 16 0.00054 35.8 9.8 131 15-168 4-150 (266)
87 2e2o_A Hexokinase; acetate and 72.9 19 0.00065 35.3 10.6 114 14-154 3-118 (299)
88 3hz6_A Xylulokinase; xylulose, 72.6 10 0.00035 40.7 9.1 74 13-96 5-81 (511)
89 3bg2_A DGTP triphosphohydrolas 71.9 2.6 8.7E-05 44.7 3.9 51 361-413 67-120 (444)
90 2zf5_O Glycerol kinase; hypert 71.1 12 0.00041 40.0 9.2 76 13-97 3-81 (497)
91 3h3n_X Glycerol kinase; ATP-bi 70.4 9 0.00031 41.1 8.0 74 13-95 5-81 (506)
92 2p3r_A Glycerol kinase; glycer 69.0 9.4 0.00032 41.0 7.8 75 13-96 3-80 (510)
93 3vov_A Glucokinase, hexokinase 68.4 64 0.0022 31.7 13.3 132 14-167 2-148 (302)
94 2gup_A ROK family protein; sug 67.1 38 0.0013 32.9 11.3 124 15-167 6-142 (292)
95 2aa4_A Mannac kinase, putative 66.7 10 0.00035 37.0 6.9 130 15-167 3-145 (289)
96 3m5f_A Metal dependent phospho 65.5 7.3 0.00025 37.6 5.3 58 398-456 55-127 (244)
97 3l0q_A Xylulose kinase; xlylul 63.1 17 0.00059 39.4 8.5 74 13-96 5-82 (554)
98 3ll3_A Gluconate kinase; xylul 63.1 16 0.00053 39.2 8.0 71 13-95 4-77 (504)
99 3mcp_A Glucokinase; structural 62.5 26 0.00089 35.9 9.3 133 13-167 9-171 (366)
100 2dpn_A Glycerol kinase; thermu 62.1 17 0.00059 38.7 8.1 73 14-95 3-78 (495)
101 3kq5_A Hypothetical cytosolic 60.2 6.4 0.00022 40.6 4.0 41 361-415 78-119 (393)
102 3jvp_A Ribulokinase; PSI-II, N 59.9 12 0.0004 40.9 6.4 78 13-96 5-94 (572)
103 1woq_A Inorganic polyphosphate 59.3 1.2E+02 0.0042 28.8 14.9 136 14-167 13-165 (267)
104 2d4w_A Glycerol kinase; alpha 59.0 32 0.0011 36.6 9.7 75 14-97 3-80 (504)
105 2h3g_X Biosynthetic protein; p 58.9 43 0.0015 32.7 9.7 131 15-168 2-148 (268)
106 2ibn_A Inositol oxygenase; red 57.9 4 0.00014 39.2 1.9 25 400-424 79-103 (250)
107 2w40_A Glycerol kinase, putati 57.2 27 0.00091 37.3 8.6 75 13-96 4-83 (503)
108 2e5n_A RNA polymerase II elong 56.4 14 0.00047 30.6 4.6 53 394-449 41-95 (100)
109 3aql_A Poly(A) polymerase; tra 56.2 8.4 0.00029 40.4 4.2 54 400-453 287-351 (415)
110 1zxo_A Conserved hypothetical 55.3 52 0.0018 32.0 9.8 126 15-166 2-130 (291)
111 1vhx_A Putative holliday junct 52.6 12 0.0004 33.4 4.0 86 14-122 4-97 (150)
112 3h6e_A Carbohydrate kinase, FG 51.7 19 0.00066 38.3 6.3 31 13-47 6-36 (482)
113 4htl_A Beta-glucoside kinase; 51.3 1.5E+02 0.0052 28.7 12.5 127 14-167 5-147 (297)
114 2doa_A RNA polymerase II elong 51.0 13 0.00043 31.1 3.6 54 394-450 40-95 (104)
115 2cqz_A 177AA long hypothetical 49.1 18 0.00063 32.9 4.9 41 361-414 35-75 (177)
116 1nu0_A Hypothetical protein YQ 47.7 74 0.0025 27.7 8.4 86 14-123 4-96 (138)
117 3mdq_A Exopolyphosphatase; str 44.4 62 0.0021 32.2 8.4 59 13-74 131-190 (315)
118 3i8b_A Xylulose kinase; strain 42.6 60 0.002 34.7 8.4 25 13-38 5-29 (515)
119 3o8m_A Hexokinase; rnaseh-like 42.2 1.6E+02 0.0056 31.2 11.6 60 14-78 81-140 (485)
120 3cet_A Conserved archaeal prot 36.5 27 0.00094 35.3 4.2 130 15-167 2-151 (334)
121 1nbw_A Glycerol dehydratase re 36.2 38 0.0013 36.7 5.4 56 13-77 2-58 (607)
122 1taz_A Calcium/calmodulin-depe 36.1 1.1E+02 0.0037 31.3 8.7 42 361-413 85-126 (365)
123 1miw_A TRNA CCA-adding enzyme; 35.0 27 0.00091 36.4 4.0 43 400-454 248-290 (404)
124 1t6c_A Exopolyphosphatase; alp 33.5 56 0.0019 32.6 6.0 58 12-74 137-197 (315)
125 1vfg_A A-adding enzyme, poly A 33.3 29 0.001 35.8 4.0 43 399-453 256-298 (390)
126 3djc_A Type III pantothenate k 33.0 47 0.0016 32.4 5.2 29 145-173 4-32 (266)
127 1u6z_A Exopolyphosphatase; alp 32.3 47 0.0016 35.6 5.5 57 14-73 138-195 (513)
128 2paq_A 5'-deoxynucleotidase YF 30.5 52 0.0018 30.6 4.9 46 361-419 34-80 (201)
129 2uyt_A Rhamnulokinase; rhamnos 29.2 37 0.0013 35.9 4.0 22 12-33 3-24 (489)
130 1sz2_A Glucokinase, glucose ki 27.3 2.4E+02 0.0081 27.7 9.5 122 4-153 10-149 (332)
131 4dzo_A Mitotic spindle assembl 27.2 49 0.0017 28.4 3.6 43 104-152 32-74 (123)
132 1zkl_A HCP1, TM22, high-affini 27.2 99 0.0034 31.4 6.6 42 361-413 86-127 (353)
133 2itm_A Xylulose kinase, xylulo 26.2 1.5E+02 0.0051 31.1 8.1 70 15-95 2-74 (484)
134 3cer_A Possible exopolyphospha 26.2 93 0.0032 31.4 6.2 62 13-74 146-211 (343)
135 1f0j_A PDE4B, phosphodiesteras 25.1 1.7E+02 0.0057 30.0 7.9 42 361-413 86-127 (377)
136 2w6k_A COBE; biosynthetic prot 24.0 1.3E+02 0.0043 26.4 5.9 59 60-127 22-80 (145)
137 1iv0_A Hypothetical protein; r 23.0 1.5E+02 0.0052 24.0 5.8 83 15-123 3-93 (98)
138 3ce9_A Glycerol dehydrogenase; 22.0 19 0.00065 36.5 0.0 74 77-155 27-100 (354)
139 3bex_A Type III pantothenate k 21.6 3.2E+02 0.011 25.9 8.8 134 11-172 1-150 (249)
140 3sk3_A Acetate kinase, acetoki 21.5 62 0.0021 33.7 3.8 31 3-33 9-39 (415)
141 3eeq_A Putative cobalamin bios 21.3 1.3E+02 0.0046 30.2 6.2 57 59-129 219-275 (336)
142 1bdg_A Hexokinase; phosphotran 21.1 1.7E+02 0.0057 30.7 7.2 61 13-78 68-129 (451)
143 1ou5_A TRNA CCA-adding enzyme, 20.5 17 0.00057 38.5 -0.8 41 400-454 306-346 (448)
No 1
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=100.00 E-value=3.6e-104 Score=870.33 Aligned_cols=498 Identities=24% Similarity=0.379 Sum_probs=445.4
Q ss_pred CCceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEE
Q 008124 11 PQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR 90 (577)
Q Consensus 11 ~~~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~ 90 (577)
+++++|+|||||||+||+|+++. ++.++++++.|++||||+|++.+|.|++++|+|+++||++|+++|++|+|+ +|+
T Consensus 9 ~~~~~AaIDiGSNSirL~I~~~~-~~~~~~l~~~k~~vrLg~g~~~~g~Ls~eai~r~~~~L~~f~~~~~~~~v~--~v~ 85 (513)
T 1u6z_A 9 RPQEFAAVDLGSNSFHMVIARVV-DGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPA--SVC 85 (513)
T ss_dssp ---CEEEEEECSSCEEEEEEEEE-TTEEEEEEEEEECCCTGGGBCTTCCBCHHHHHHHHHHHHHHHHHTTTCCGG--GEE
T ss_pred cCCeEEEEEeccccEEEEEEEEc-CCeeEEEEeeEEEEeccCcccccCCcCHHHHHHHHHHHHHHHHHHHhCCCC--EEE
Confidence 44579999999999999999997 578999999999999999999999999999999999999999999999995 799
Q ss_pred EEeehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEE
Q 008124 91 AVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCES 170 (577)
Q Consensus 91 ~vATsA~R~A~N~~~fl~~i~~~tGl~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~~S 170 (577)
+|||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++..+ +++++||||||||+++++++++..+.|
T Consensus 86 ~vATsA~R~A~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~-~~lviDIGGGStEl~~~~~~~~~~~~S 164 (513)
T 1u6z_A 86 IVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKG-RKLVIDIGGGSTELVIGENFEPILVES 164 (513)
T ss_dssp EEECHHHHHCTTHHHHHHHHTTTCSSCEEECCHHHHHHHHHHHHHHHSCCCS-CEEEEEECSSCEEEEEEETTEEEEEEE
T ss_pred EEecHHHHcCcCHHHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhccCCC-CEEEEEECCCcEEEEEEeCCeeeEEEE
Confidence 9999999999999999999999999999999999999999999999987433 689999999999999999999999999
Q ss_pred EehhHHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHhhchhHHHHhcCCeEEEeecHHHHHHHHHHHc-CCCcccccCCCC
Q 008124 171 VNLGHVSLSEKFGTCS-GNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVS-GYDRDFVDNVGD 248 (577)
Q Consensus 171 lplG~vrl~e~f~~~~-~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~liG~gGt~~~la~~~~~-~y~~~~~~~~~~ 248 (577)
+|+|+||++++|+.++ ++..++..+++|+++.+.+.. ..++..++..+||+|||+++++++... +|+.
T Consensus 165 l~lG~vrlte~f~~~~~~~~~~~~~~~~~i~~~l~~~~--~~~~~~~~~~lvg~gGt~~~la~i~~~~~~~~-------- 234 (513)
T 1u6z_A 165 RRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLT--WQFRIQGWNVAMGASGTIKAAHEVLMEMGEKD-------- 234 (513)
T ss_dssp ESCCHHHHHHHHSGGGBCCHHHHHHHHHHHHHHHTTTH--HHHHHHCCSEEEEESHHHHHHHHHHHHTTCSS--------
T ss_pred EeccHHHHHHHHcccCCCCHHHHHHHHHHHHHHHHHHH--HHhhhcCCCEEEEEChHHHHHHHHHHhCCCCC--------
Confidence 9999999999998864 688889999999999997642 234444666799999999999998643 4531
Q ss_pred CCCCccccccCHHHHHHHHHHHHcCCCcHHHHHhhcCCCccchhhHHHHHHHHHHHHHHhCCCeEEECCcchHHHHHHHH
Q 008124 249 FGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVADS 328 (577)
Q Consensus 249 ~~~~~~~~~l~~~~l~~l~~~l~~~~~~~~er~~~~gl~~~Radii~~g~~il~~l~~~~~~~~i~vs~~glReGll~~~ 328 (577)
+ .++.+++.++++++..++.+ ++.+++||+++|+|+|+||++|+.++|+.+++++|+||++|||||+++++
T Consensus 235 ------~-~i~~~~l~~~~~~l~~~~~~--~r~~~~gl~~~Rad~i~~g~~Il~~i~~~~~~~~i~vs~~glreGll~~~ 305 (513)
T 1u6z_A 235 ------G-IITPERLEKLVKEVLRHRNF--ASLSLPGLSEERKTVFVPGLAILCGVFDALAIRELRLSDGALREGVLYEM 305 (513)
T ss_dssp ------S-CBCHHHHHHHHHHHTTCSBG--GGCCCTTCCTTGGGTHHHHHHHHHHHHHHHTCSCBEECSCCHHHHHHHHH
T ss_pred ------C-eecHHHHHHHHHHHHCCCHH--HHHhcCCCChhHHHHHHHHHHHHHHHHHHcCCCEEEECCCcHHHHHHHHH
Confidence 1 59999999999999999998 99999999999999999999999999999999999999999999999999
Q ss_pred HhcccCCCCCCcchhHHHHHHHHHHhCCcccchhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHH
Q 008124 329 LAKVFDGYDLNANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLL 408 (577)
Q Consensus 329 l~~~~~~~~~~~~~~~~s~~~l~~ry~~d~~~~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~L 408 (577)
+.+.. ..|++.+|++++++||++|. .|+++|+++|++|||+|++.|++.. ++++++||+|||+|
T Consensus 306 ~~~~~-----~~d~~~~s~~~l~~ry~~d~--~ha~~V~~~a~~Lf~~l~~~~~l~~---------~~~~~~lL~~Aa~L 369 (513)
T 1u6z_A 306 EGRFR-----HQDVRSRTASSLANQYHIDS--EQARRVLDTTMQMYEQWREQQPKLA---------HPQLEALLRWAAML 369 (513)
T ss_dssp HHHHT-----TCCHHHHHHHHHHHHTTCCH--HHHHHHHHHHHHHHHHHHHHCGGGC---------CHHHHHHHHHHHHH
T ss_pred HHhcc-----cccHHHHHHHHHHHHhCCCH--HHHHHHHHHHHHHHHHHHHhhCcCC---------ChhHHHHHHHHHHH
Confidence 87632 23788999999999999987 9999999999999999999987421 23567999999999
Q ss_pred hhcccccCCCCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCCchhhcCCChHHHHHHHHHHHHHHHHHHh
Q 008124 409 HNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVIL 488 (577)
Q Consensus 409 HdIG~~I~~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~~yhrk~~~~~~~~~~~~l~~~~~~~v~kL~~iLRlA~~L 488 (577)
|||||+||+++||+||+|||+|++ ++||||+||.+||++++||+++.|+..++.+..|++ +.+++|++|||||++|
T Consensus 370 hdiG~~I~~~~~~~Hs~yii~n~~-l~G~s~~e~~~lA~l~~~h~~~~~~~~~~~~~~l~~---~~v~~L~~iLRlA~~L 445 (513)
T 1u6z_A 370 HEVGLNINHSGLHRHSAYILQNSD-LPGFNQEQQLMMATLVRYHRKAIKLDDLPRFTLFKK---KQFLPLIQLLRLGVLL 445 (513)
T ss_dssp TTTTTTTCSTTHHHHHHHHHHHSC-CTTCCHHHHHHHHHHHHTSSSCCCCTTCCCCSSCCH---HHHHHHHHHHHHHHHT
T ss_pred HHccCcCCccccchhHHHHHhcCC-CCCCCHHHHHHHHHHHHHhCCCCCcchhhhhhccCH---HHHHHHHHHHHHHHHh
Confidence 999999999999999999999998 999999999999999999999999866556678887 2589999999999999
Q ss_pred ccccCCC-Ccc-eEEEEeCCeeEEEEeecccCCCCCCCCCCCCcccHHHHHHHHHHHHHHHcCceEEEEeecCCC
Q 008124 489 QQNDCVN-LRG-VDFFHSYEGFKLQVIKEARDQPYLPGSSQPTLDNIEAELEKELEHFKKIFKQELLVVGSSSSS 561 (577)
Q Consensus 489 d~s~~~~-i~~-i~l~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~fg~~l~i~~~~~~~ 561 (577)
|++|.+. +++ ++++.+++.++| .+ +..|....++..|.+++++++|+++||.++.++..+++.
T Consensus 446 d~~~~~~~i~~~~~~~~~~~~l~l-~~---------~~~~~~~~~Le~~~l~~~~~~~~~~~g~~l~l~~~~~~~ 510 (513)
T 1u6z_A 446 NNQRQATTTPPTLTLITDDSHWTL-RF---------PHDWFSQNALVLLDLEKEQEYWEGVAGWRLKIEEESTPE 510 (513)
T ss_dssp TTTGGGCCCCSCCEEEEETTEEEE-EE---------CTTGGGGCHHHHHHHHHHHHHHTTSTTCEEEEEECCCC-
T ss_pred ccccCCCCCCCeeEEEEECCEEEE-EE---------cCcccccCcHHHHHHHHHHHHHHHHhCCeEEEEECCCcc
Confidence 9999888 899 999998888877 43 455655556546999999999999999999998776643
No 2
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.1e-100 Score=841.20 Aligned_cols=488 Identities=20% Similarity=0.251 Sum_probs=428.4
Q ss_pred CCceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEE
Q 008124 11 PQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR 90 (577)
Q Consensus 11 ~~~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~ 90 (577)
..+++|+|||||||+||+|+++. ++.+.++++.|++||||+|++.+|.|++++|+|+++||++|+++|+.|+|+ +++
T Consensus 13 ~~~~~AaIDiGSNS~rL~I~~~~-~~~~~~~~~~k~~vrLg~gl~~~g~Ls~eai~r~~~~L~~F~~~~~~~~v~--~v~ 89 (508)
T 3hi0_A 13 GLAPVSVIDIGSNSVRLVVYEGL-SRAPAVLFNEKVLCGLGKGLALTGRMHEEGVTRALMALRRFHVLSEQAQAQ--KLY 89 (508)
T ss_dssp TCCCEEEEEECSSEEEEEEESCS-SSSCCEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCS--EEE
T ss_pred cCCeEEEEEECCccEEEEEEEEc-CCCceEEEEEeEEeecccCccccCCcCHHHHHHHHHHHHHHHHHHHhCCCC--eEE
Confidence 34679999999999999999986 567889999999999999999999999999999999999999999999995 799
Q ss_pred EEeehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEE
Q 008124 91 AVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCES 170 (577)
Q Consensus 91 ~vATsA~R~A~N~~~fl~~i~~~tGl~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~~S 170 (577)
+|||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++. .+++++||||||||+++++++++..++|
T Consensus 90 ~vATsA~R~A~N~~~fl~~i~~~tG~~ievIsG~EEA~l~~~gv~~~~~~--~~~lvvDIGGGStEl~~~~~~~~~~~~S 167 (508)
T 3hi0_A 90 VLATAAAREAENGPDFIREAEAILGCEIEVLSGEKEALYSAYGVISGFYQ--PDGIAGDLGGGSLELIDIKDKSCGEGIT 167 (508)
T ss_dssp EEECTHHHHSTTHHHHHHHHHHHHTSCEEECCHHHHHHHHHHHHHHHSSS--CEEEEEEECSSCEEEEEEETTEECCCEE
T ss_pred EEeeHHHHcCcCHHHHHHHHHHHHCCCeEEecHHHHHHHHHHHHHhcCCC--CCeEEEEeCCCceEEEEeeCCeeeeEEE
Confidence 99999999999999999999999999999999999999999999998874 3479999999999999999999999999
Q ss_pred EehhHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHhhchhHHHHhcCCeEEEeecHHHHHHHHHHH--cCCCcccccCCCC
Q 008124 171 VNLGHVSLSEKFGTCSGNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVV--SGYDRDFVDNVGD 248 (577)
Q Consensus 171 lplG~vrl~e~f~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~liG~gGt~~~la~~~~--~~y~~~~~~~~~~ 248 (577)
+|+||||+++.+.. ++..+++|+++.+.++ .+++...++..+||+|||+++++++.. .+||.+.+|
T Consensus 168 l~lG~vrl~e~~~~------~~~~~~~~i~~~l~~~--~~~~~~~~~~~~ig~gGt~~~la~i~~~~~~y~~~~~~---- 235 (508)
T 3hi0_A 168 LPLGGLRLSEQSDG------SLEKAATIARKHVKSF--AKLLAAGEGRTFYAVGGTWRNIAKLHMEISGYPLHMMQ---- 235 (508)
T ss_dssp ESCCHHHHHHHTTT------CHHHHHHHHHHHHHTT--HHHHHTTTTSEEEEESHHHHHHHHHHHHHHTCSCCCCT----
T ss_pred ecceEEehhhcChh------HHHHHHHHHHHHHHHH--HHHHhhcCCCEEEEEehHHHHHHHHHhhccCCCccccc----
Confidence 99999999998432 4677899999999862 234445556789999999999999763 468765444
Q ss_pred CCCCccccccCHHHHHHHHHHHHcCCCcHHHHHhhcCCCccchhhHHHHHHHHHHHHHHhCCCeEEECCcchHHHHHHHH
Q 008124 249 FGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVADS 328 (577)
Q Consensus 249 ~~~~~~~~~l~~~~l~~l~~~l~~~~~~~~er~~~~gl~~~Radii~~g~~il~~l~~~~~~~~i~vs~~glReGll~~~ 328 (577)
+|.++.+++.++++++..++.+ ++.+++||+++|+|+|+||++|+.++|+.+++++|+||++|||||+++++
T Consensus 236 ------~~~i~~~~l~~~~~~l~~~~~~--~~~~~~gl~~~Radvi~~g~~Il~~i~~~~~~~~i~vs~~glREGll~~~ 307 (508)
T 3hi0_A 236 ------GYELPLEEMLNFLEEVIVSRDS--KDPAWQAVSKNRRSLLPFGAIAMREVLRAMKPAKIAFSAQGVREGYLYSL 307 (508)
T ss_dssp ------TCEEEHHHHHHHHHHHHTCCC------CCHHHHHCTTCSHHHHHHHHHHHHHHHCCSEEEECSCCHHHHHHHTT
T ss_pred ------CcEEcHHHHHHHHHHHHcCCHH--HHHhccCCCHhHHHHHHHHHHHHHHHHHHcCcCEEEECCCcHHHHHHHHH
Confidence 6899999999999999999998 99999999999999999999999999999999999999999999999999
Q ss_pred HhcccCCCCCCcchhHHHHHHHHHHhCCcccchhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHH
Q 008124 329 LAKVFDGYDLNANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLL 408 (577)
Q Consensus 329 l~~~~~~~~~~~~~~~~s~~~l~~ry~~d~~~~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~L 408 (577)
+.+... ..|++.+|+++++.||++|. .|+++|+++|+.||||++ ++ .++++++||+|||+|
T Consensus 308 l~~~~~----~~d~~~~s~~~l~~ry~~d~--~ha~~V~~~a~~Lf~ql~-~~------------~~~~~~~lL~~Aa~L 368 (508)
T 3hi0_A 308 LTEAER----ESDPLLVAADELAILRARSP--EHARELADWSGRTFPVFG-ID------------ETEEESRYRQAACLL 368 (508)
T ss_dssp SCHHHH----HSCHHHHHHHHHHHHHCSCH--HHHHHHHHHHHHHGGGGT-CC------------CCHHHHHHHHHHHHH
T ss_pred hhhhcc----ccCHHHHHHHHHHHHhCcCH--HHHHHHHHHHHHHHHhhc-cC------------CChHHHHHHHHHHHH
Confidence 865321 23778999999999999987 999999999999999997 43 234678999999999
Q ss_pred hhcccccCCCCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCC-CCCCC-chhhcCCChHHHHHHHHHHHHHHHHH
Q 008124 409 HNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKK-FPRSH-HAFLEEFPEQAKQKFRVLCAIVRLSV 486 (577)
Q Consensus 409 HdIG~~I~~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~~yhrk~-~~~~~-~~~~~~l~~~~~~~v~kL~~iLRlA~ 486 (577)
|||||+||+++||+||+|||.|++ ++||||+||.+||++++|+++. .++.. ++.+..|+++++..+.+|++|||||+
T Consensus 369 hdiG~~i~~~~~~~Hs~yii~n~~-l~Gfs~~e~~~lA~~~~~r~~~~~~~~~~~~~~~ll~~~~~~~~~~L~~iLRlA~ 447 (508)
T 3hi0_A 369 ADISWRAHPDYRGLQALNIIAHSS-FVAITHPGRAYIALANYYRFEGLNDNGTTEPLAAMAGERLQELGKLLGGLLRVVY 447 (508)
T ss_dssp TTTTTTSCGGGHHHHHHHHHHHBC-CCSCCHHHHHHHHHHHHHHHHCSCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHhCCCchHHHHHHHHHcCC-CCCCCHHHHHHHHHHHHHhcCCCCccchhhHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998 9999999999999877555432 33332 34456688999999999999999999
Q ss_pred HhccccCCCCcceEEEEeCC---eeEEEEeecccCCCCCCCCCCCCcccHHHHHHHHHHHHHHHcCceEEEEe
Q 008124 487 ILQQNDCVNLRGVDFFHSYE---GFKLQVIKEARDQPYLPGSSQPTLDNIEAELEKELEHFKKIFKQELLVVG 556 (577)
Q Consensus 487 ~Ld~s~~~~i~~i~l~~~~~---~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~fg~~l~i~~ 556 (577)
+||+++.+.+++++++.+++ .++| .+ |.+|. .++ .|.+++..++|+++||+++.|+|
T Consensus 448 ~L~~~~~~~i~~~~~~~~~~~~~~l~l-~~---------~~~~~-~l~--~~~~~~~~~~~~~~~g~~~~~~~ 507 (508)
T 3hi0_A 448 LFSASMPGVVDHLKFRKSDNPDIDLEF-VV---------PHDYC-DFA--GERLDGRLQQLAKLTGKRLAFVF 507 (508)
T ss_dssp HHHTTCSSSGGGCEEEECSSTTCSEEE-EE---------CGGGG-GGC--CHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HhcCCCcCCCCceEEEECCCCceEEEE-EE---------CCCcH-HHH--HHHHHHHHHHHHHHHCCCeEEEe
Confidence 99999999999999999888 7888 44 33343 334 48999999999999999999987
No 3
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=100.00 E-value=7.1e-69 Score=555.95 Aligned_cols=303 Identities=26% Similarity=0.462 Sum_probs=280.5
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEE
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (577)
+++|+|||||||+||+|+++.+ +.++++++.+++||||+|++.+|.|++++|+|++++|++|+++|++|+|+ ++++|
T Consensus 4 ~~~A~IDiGSNsirL~I~~~~~-~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~~~~~~v~--~v~~v 80 (315)
T 3mdq_A 4 QRIGVIDMGTNTFHLLITDIVN-DRPHTLVNEKSAVGLGKGGITKGFITEEAMDRALDTLKKFRVILDEHAVV--HVIAT 80 (315)
T ss_dssp CEEEEEEECSSEEEEEEEEEET-TEEEEEEEEEEECCSSTTTGGGTCCCHHHHHHHHHHHHHHHHHHHHTTCC--EEEEE
T ss_pred ceEEEEEecCCcEEEEEEEEcC-CceEEeeeceeeeeccccccccCCcCHHHHHHHHHHHHHHHHHHHHcCCC--EEEEE
Confidence 4699999999999999999985 78999999999999999999999999999999999999999999999995 79999
Q ss_pred eehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEEEe
Q 008124 93 ATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVN 172 (577)
Q Consensus 93 ATsA~R~A~N~~~fl~~i~~~tGl~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~~Slp 172 (577)
||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++..+.+++++||||||||+++++++++..++|+|
T Consensus 81 ATsA~R~A~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~~Sl~ 160 (315)
T 3mdq_A 81 GTSAVRSGSNKQVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNEILWKQSFE 160 (315)
T ss_dssp ECHHHHHCTTHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSCEEEEEEES
T ss_pred eeHHHHcCcCHHHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCeEeeeEEEe
Confidence 99999999999999999999999999999999999999999999987655679999999999999999999999999999
Q ss_pred hhHHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHhhchhHHHHhcCCeEEEeecHHHHHHHHHHH----cCCCcccccCCC
Q 008124 173 LGHVSLSEKFGTCS-GNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVV----SGYDRDFVDNVG 247 (577)
Q Consensus 173 lG~vrl~e~f~~~~-~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~liG~gGt~~~la~~~~----~~y~~~~~~~~~ 247 (577)
+|+|||+++|+..+ ++..+++.+++|+++.+.+. .++++..++..+||+|||+|+++++.. ..|+.+.+|
T Consensus 161 lG~vrl~e~f~~~~~~~~~~~~~~~~~i~~~l~~~--~~~~~~~~~~~lig~gGt~~~la~~~~~~~~~~y~~~~~~--- 235 (315)
T 3mdq_A 161 IGGQRLIDRFHVHDPMREDDRVMMHNYFDEVLVPL--EKAINTWRPTQLIGCSGTFDTLAEMNIQHHREKIALEKQT--- 235 (315)
T ss_dssp CCHHHHHHHSCCCSSCCHHHHHHHHHHHHHHTHHH--HHHHHHHCCCEEEEESHHHHHHHHHHHHHHTCCCCGGGCS---
T ss_pred chhhHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH--HHHHhhcCCCEEEEEchHHHHHHHHHHhcccCCCCccccc---
Confidence 99999999999865 68888999999999999864 234555567789999999999999763 457765444
Q ss_pred CCCCCccccccCHHHHHHHHHHHHcCCCcHHHHHhhcCCCccchhhHHHHHHHHHHHHHHhCCCeEEECCcchHHHHHHH
Q 008124 248 DFGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVAD 327 (577)
Q Consensus 248 ~~~~~~~~~~l~~~~l~~l~~~l~~~~~~~~er~~~~gl~~~Radii~~g~~il~~l~~~~~~~~i~vs~~glReGll~~ 327 (577)
++.++.+++.+++++|..++.+ ++.+++||+++|+|+|+||++|+.++|+.+++++|+||++|||||++++
T Consensus 236 -------~~~i~~~~l~~~~~~l~~~~~~--~r~~~~gl~~~Rad~i~~g~~Il~~i~~~~~~~~i~vs~~glreG~l~~ 306 (315)
T 3mdq_A 236 -------SYLLSLPDFNRLRKQLVASTRR--ERLAIAGMIELRADMVVVAICLIEHVLKLVSTNAITVSTYSLKEGVLYT 306 (315)
T ss_dssp -------EEEEEHHHHHHHHHHHHHCCHH--HHHTSTTCCHHHHHHHHHHHHHHHHHHHHSCCSEEEEESCCHHHHHHHH
T ss_pred -------CcEEcHHHHHHHHHHHHcCCHH--HHHhcCCCChhHHHHHHHHHHHHHHHHHHcCcCEEEECCccHHHHHHHH
Confidence 6899999999999999999988 9999999999999999999999999999999999999999999999999
Q ss_pred HHhcc
Q 008124 328 SLAKV 332 (577)
Q Consensus 328 ~l~~~ 332 (577)
++.+.
T Consensus 307 ~~~~~ 311 (315)
T 3mdq_A 307 MLDGV 311 (315)
T ss_dssp HHHTC
T ss_pred Hhhhh
Confidence 98764
No 4
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=100.00 E-value=1.2e-66 Score=544.39 Aligned_cols=311 Identities=27% Similarity=0.367 Sum_probs=275.3
Q ss_pred cccccCCCceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCC
Q 008124 5 TSYMQIPQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNI 84 (577)
Q Consensus 5 ~~~~~~~~~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v 84 (577)
.+-|...++++|+|||||||+||+|+++.+++.++++++.+++||||+|++.+|.|++++|+|++++|++|+++|+.|++
T Consensus 8 ~~~~~~~~~~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~aL~~f~~~~~~~~v 87 (343)
T 3cer_A 8 HSHMSKESVTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQDVDKTHRFADEALERAYVAAREFAGVIAEHPI 87 (343)
T ss_dssp ------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred ccccCCCCCeEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeCCCCccccCCcCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 34456666789999999999999999998667799999999999999999999999999999999999999999999999
Q ss_pred CcccEEEEeehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCC--CCCceEEEEeCCCceEEEEeeC
Q 008124 85 SRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPV--FDRLVLSVDIGGGSTEFVIGKR 162 (577)
Q Consensus 85 ~~~~i~~vATsA~R~A~N~~~fl~~i~~~tGl~i~VIsg~eEA~l~~~gv~~~~~~--~~~~~lviDIGGGStEl~~~~~ 162 (577)
+ ++++|||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++. .+.+++++||||||||++++++
T Consensus 88 ~--~v~~vATsA~R~A~N~~~fl~~v~~~tGi~ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~ 165 (343)
T 3cer_A 88 D--GLRFVATSATRDAENREEFEDEIERILGVRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGD 165 (343)
T ss_dssp S--EEEEEECHHHHHCTTHHHHHHHHHHHHSSCCEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCC
T ss_pred C--eEEEEecHHHHcCcCHHHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeec
Confidence 5 79999999999999999999999999999999999999999999999998875 4456999999999999999988
Q ss_pred ------CeEEEEEEEehhHHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHhhchhHHHHhcCCeEEEeecHHHHHHHHHHH
Q 008124 163 ------GKVVFCESVNLGHVSLSEKFGTCS-GNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVV 235 (577)
Q Consensus 163 ------~~~~~~~SlplG~vrl~e~f~~~~-~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~liG~gGt~~~la~~~~ 235 (577)
+++.++.|+|+|+++++++|+..+ ++..+++.+++|+++.+.+.. ..++..++..+||+|||+|+++++..
T Consensus 166 ~~~~~~~~~~~~~SlplG~v~lt~~~~~~~~~~~~~~~~~~~~i~~~l~~~~--~~~~~~~~~~lvg~gGt~~~la~l~~ 243 (343)
T 3cer_A 166 GVSAPTTQVQGAFSMNIGSVRMTERHLTNDPPTQTQIDEAVADVDEHIDEAF--RTVDAGKARTIIGVSGTVTTMTALAM 243 (343)
T ss_dssp SSSSCTTSCSEEEEESCCHHHHHHHTCCSSSCCHHHHHHHHHHHHHHHHHHH--TTSCGGGCSEEEEESHHHHHHHHHHT
T ss_pred CccCcccccceeEEEehhHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH--HhhhhcCCcEEEEEchHHHHHHHHHh
Confidence 555699999999999999998764 688889999999999997641 11222234579999999999999864
Q ss_pred c--CCCcccccCCCCCCCCccccccCHHHHHHHHHHHHcCCCcHHHHHhhcCCCccchhhHHHHHHHHHHHHHHh-----
Q 008124 236 S--GYDRDFVDNVGDFGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELL----- 308 (577)
Q Consensus 236 ~--~y~~~~~~~~~~~~~~~~~~~l~~~~l~~l~~~l~~~~~~~~er~~~~gl~~~Radii~~g~~il~~l~~~~----- 308 (577)
. .|+.+.+ |+|.++.+++.+++++|..++.+ +|.+++||+++|+|+|+||++|+.++|+.+
T Consensus 244 ~~~~y~~~~v----------hg~~l~~~~l~~~~~~l~~~~~~--er~~~~gl~~~Radvi~~g~~Il~~i~~~~~~~~~ 311 (343)
T 3cer_A 244 GLKEYDHTVV----------DGHRLSFEDAYAVDDKFLRMTRA--ERREYKTIHPGRIDVVGGGAVVWSRVLARVSEAAK 311 (343)
T ss_dssp TCSSCCHHHH----------TTCEEEHHHHHHHHHHHHSSCHH--HHHTCTTSCTTTTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccCCcccc----------CCeEEcHHHHHHHHHHHHcCCHH--HHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3 4665444 46899999999999999999988 999999999999999999999999999999
Q ss_pred -----CCCeEEECCcchHHHHHHHHHhc
Q 008124 309 -----GIEEMEVSGYGLGEGVVADSLAK 331 (577)
Q Consensus 309 -----~~~~i~vs~~glReGll~~~l~~ 331 (577)
++++|+||++|||||++++++.+
T Consensus 312 ~~~~~~~~~i~vs~~glreGll~~~~~~ 339 (343)
T 3cer_A 312 ADHGEAIDSFVASEHGLLDGIVLDYGRR 339 (343)
T ss_dssp HHHSCCCCEEEEESCSHHHHHHHHHHHH
T ss_pred ccccCCCCEEEECCCcHHHHHHHHHHHH
Confidence 99999999999999999998754
No 5
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=100.00 E-value=3.3e-65 Score=527.92 Aligned_cols=296 Identities=31% Similarity=0.425 Sum_probs=272.0
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEE
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (577)
.++|+|||||||+||+|+++. ++.++++++.+++||||++++.+|.|++++|+|++++|++|+++++.|+++ ++++|
T Consensus 12 m~~a~IDiGSns~rl~I~~~~-~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~~~~~~v~--~i~~v 88 (315)
T 1t6c_A 12 MRVASIDIGSYSVRLTIAQIK-DGKLSIILERGRITSLGTKVKETGRLQEDRIEETIQVLKEYKKLIDEFKVE--RVKAV 88 (315)
T ss_dssp EEEEEEEECSSEEEEEEEEEE-TTEEEEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCS--EEEEE
T ss_pred cEEEEEEECcCcEEEEEEEEc-CCcEEEEeeeeEEeecCCCccccCCcCHHHHHHHHHHHHHHHHHHHHCCCC--eEEEE
Confidence 379999999999999999997 677999999999999999999999999999999999999999999999995 79999
Q ss_pred eehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEEEe
Q 008124 93 ATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVN 172 (577)
Q Consensus 93 ATsA~R~A~N~~~fl~~i~~~tGl~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~~Slp 172 (577)
||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++ ...+++++||||||||+++++++++..+.|+|
T Consensus 89 ATsA~R~A~N~~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~-~~~~~lvvDIGGGStEl~~~~~~~~~~~~Sl~ 167 (315)
T 1t6c_A 89 ATEAIRRAKNAEEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLK-PEGEVCVVDQGGGSTEYVFGKGYKVREVISLP 167 (315)
T ss_dssp ECHHHHTSTTHHHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTC-CCSEEEEEEEETTEEEEEEEETTEEEEEEEEC
T ss_pred EcHHHHcCcCHHHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcc-cCCCEEEEEeCCCcEEEEEEeCCceeeEEEEe
Confidence 99999999999999999999999999999999999999999999887 44568999999999999999999999999999
Q ss_pred hhHHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHhhchhHHHHhcCCeEEEeecHHHHHHHHHHHc--CCCcccccCCCCC
Q 008124 173 LGHVSLSEKFGTCS-GNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVS--GYDRDFVDNVGDF 249 (577)
Q Consensus 173 lG~vrl~e~f~~~~-~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~liG~gGt~~~la~~~~~--~y~~~~~~~~~~~ 249 (577)
+|+++++++|+..+ +++.+++.+++|+++.+.+. . +.. ..+||+|||+|+++++... .|+.+.+
T Consensus 168 ~G~v~l~e~~~~~~~~~~~~~~~~~~~i~~~l~~~--~---~~~--~~lig~gGt~~~la~~~~~~~~y~~~~v------ 234 (315)
T 1t6c_A 168 IGIVNLTETFFKQDPPTEEEVKRFFEFLEKELSKV--K---KPV--DTIVGLGGTITTLAALEYNVYPYDPQKV------ 234 (315)
T ss_dssp CCHHHHHHHHCCSSSCCHHHHHHHHHHHHHHHTTT--C---CCC--SEEEEESHHHHHHHHHHTTCCSCCHHHH------
T ss_pred ccHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH--H---hhc--CEEEEECcHHHHHHHHHhhccCCCcccc------
Confidence 99999999998764 68888999999999998653 1 111 4689999999999998643 5665444
Q ss_pred CCCccccccCHHHHHHHHHHHHcCCCcHHHH-HhhcCCCccchhhHHHHHHHHHHHHHHhCCCeEEECCcchHHHHHHHH
Q 008124 250 GGCKRDWRLSRGELKGIVERLCCGGDGEVER-VRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVADS 328 (577)
Q Consensus 250 ~~~~~~~~l~~~~l~~l~~~l~~~~~~~~er-~~~~gl~~~Radii~~g~~il~~l~~~~~~~~i~vs~~glReGll~~~ 328 (577)
|+|.++.+++.+++++|..++.+ +| .+++||+++|+|+|+||++|+.++|+.+++++|+||++|||||+++++
T Consensus 235 ----~g~~l~~~~l~~~~~~l~~~~~~--er~~~~~gl~~~Rad~i~~g~~Il~~i~~~~~~~~i~vs~~glreGll~~~ 308 (315)
T 1t6c_A 235 ----HGKVLTYGQIKKWFDTFKEIPSE--ERSKRFRQVEDRRAKVILAGIGIFLKTLEIFEKDCLIVSDWGLREGVLVSE 308 (315)
T ss_dssp ----TTCEEEHHHHHHHHHHHTTSCHH--HHHHHSTTSCGGGTTTHHHHHHHHHHHHHHHTCSEEEEESCCHHHHHHHHH
T ss_pred ----CCeEEcHHHHHHHHHHHHcCCHH--HHHHhcCCCChhHHHHHHHHHHHHHHHHHHcCcCEEEECCCchHHHHHHHH
Confidence 46889999999999999999988 99 999999999999999999999999999999999999999999999998
Q ss_pred Hhc
Q 008124 329 LAK 331 (577)
Q Consensus 329 l~~ 331 (577)
+.+
T Consensus 309 ~~~ 311 (315)
T 1t6c_A 309 VLK 311 (315)
T ss_dssp HHH
T ss_pred Hhh
Confidence 854
No 6
>3rf0_A Exopolyphosphatase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, hydrolase; HET: MSE; 1.80A {Yersinia pestis}
Probab=100.00 E-value=1.1e-39 Score=317.93 Aligned_cols=192 Identities=19% Similarity=0.296 Sum_probs=170.4
Q ss_pred cchhHHHHHHHHHHhCCcccchhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchH--HHHHHHHHHhhcccccCC
Q 008124 340 ANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDL--EYLEAACLLHNIGHFTSK 417 (577)
Q Consensus 340 ~~~~~~s~~~l~~ry~~d~~~~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r--~LL~~Aa~LHdIG~~I~~ 417 (577)
.|++.+|+.+++.||++|. .|+++|+++|.+|||++++.|++ +++++ +||+|||+|||||++||+
T Consensus 3 ~Dir~~sv~~l~~ry~vd~--~ha~~V~~~A~~Lf~~l~~~~~l-----------~~~~~~~~lL~~Aa~LHdIG~~I~~ 69 (209)
T 3rf0_A 3 QDIRQRTAKSLADHYNIDR--EQARRVLETTEQLYTQWLAQNTK-----------LVQPQLEALLKWAAMLHEVGLSINH 69 (209)
T ss_dssp HHHHHHHHHHHHHHHTCCH--HHHHHHHHHHHHHHHHHHHHCGG-----------GCCHHHHHHHHHHHHHTTGGGGTCS
T ss_pred CCHHHHHHHHHHHHhCCCH--HHHHHHHHHHHHHHHHHHHHhCC-----------ChhHHHHHHHHHHHHHHHcccccCc
Confidence 4899999999999999987 99999999999999999999875 34667 999999999999999999
Q ss_pred CCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCCchhhcCCChHHHHHHHHHHHHHHHHHHhccccCCCC-
Q 008124 418 KGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQNDCVNL- 496 (577)
Q Consensus 418 ~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~~yhrk~~~~~~~~~~~~l~~~~~~~v~kL~~iLRlA~~Ld~s~~~~i- 496 (577)
++||+||+|||.|++ ++||||+||.+||++++|||++.|+. .+..+++.++..+.+|++|||||++||+++.+.+
T Consensus 70 ~~~hkHs~Yii~n~~-l~Gfs~~e~~~lA~lv~~hr~~~~~~---~~~~l~~~~~~~~~~L~~iLRLA~~L~~~r~~~~l 145 (209)
T 3rf0_A 70 SGMHRHSAYILQNTN-LPGFNQEQQTLLATLVRMHRKAIKLD---ELPRLNLFKKKYYLPLIQLLRLSTLLNNQRQSTTT 145 (209)
T ss_dssp TTHHHHHHHHHHHSC-CTTCCHHHHHHHHHHHHTSSSCCCGG---GCCCCSSCCHHHHHHHHHHHHHHHHHTTTGGGCCC
T ss_pred ccchHHHHHHHhCCC-CCCCCHHHHHHHHHHHHHhcCCCChh---hhhhcCHHHHHHHHHHHHHHHHHHHHhccccCCCC
Confidence 999999999999998 99999999999999999999988763 2334677888899999999999999999999874
Q ss_pred c-ceEEEEeCCeeEEEEeecccCCCCCCCCCCCCcccHHHHHHHHHHHHHHHcCceEEEEeec
Q 008124 497 R-GVDFFHSYEGFKLQVIKEARDQPYLPGSSQPTLDNIEAELEKELEHFKKIFKQELLVVGSS 558 (577)
Q Consensus 497 ~-~i~l~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~fg~~l~i~~~~ 558 (577)
+ +++++.+++.++| .+ |.+|....++..+.++++.++|+++||.++.|.+.+
T Consensus 146 ~~~~~l~~~~~~l~L-~~---------~~~wl~~~pL~~~~l~~e~~~~~~~~g~~l~i~~~~ 198 (209)
T 3rf0_A 146 PESLRLITDDSHWTL-RF---------PHGYLTQNSLVQLDFEREQAYWDDVVGWKLVIEEEE 198 (209)
T ss_dssp CSCCEEEEETTEEEE-EE---------CTTHHHHCHHHHHHHHHHHHHHTTSTTCEEEEEECC
T ss_pred CCceEEEEcCCEEEE-Ee---------CccccccCHHHHHHHHHHHHHHHHHhCeeeEEEecC
Confidence 7 8999988888888 54 456655556666899999999999999999997443
No 7
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=99.96 E-value=3.6e-29 Score=261.87 Aligned_cols=154 Identities=18% Similarity=0.148 Sum_probs=129.2
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEe-----eeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcc
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDT-----LKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRD 87 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~-----~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~ 87 (577)
+.+||||+||||+||.|+++.+++.++++++ .+..+||+.+... +++++++++ +|++ ++.++++
T Consensus 3 ~~~avID~GSns~Rl~I~~~~~~~~~~~i~~~~~~~~k~~~gLs~~~~~-----~~~~~~~l~---~f~~-~~~~~~~-- 71 (353)
T 3aap_A 3 SCIAVIDAGSTGSRLHIYSYDTDDTNTPIHIEEIWNKKIKPGFASIQPN-----SVTIDAYLT---MLLA-DAPIHNI-- 71 (353)
T ss_dssp EEEEEEEECSSCEEEEEEEEEECTTSCEEEEEEEEEEEESSCGGGSCCS-----HHHHHHHHH---HHHT-TCSCCSE--
T ss_pred CEEEEEEcCCCCeEEEEEEEcCCCCCceeEeeeeeeeccCCChhhcCCC-----HHHHHHHHH---HHHH-HHhcCCC--
Confidence 4689999999999999999986555667776 5666778777643 899998876 8888 7878874
Q ss_pred cEEEEeehhhhhcCC--hHHHHHHHHHHc-------CCcEEEeChHHHHHHHHhhhhccCCC----CCCceEEEEeCCCc
Q 008124 88 HTRAVATAAVRAAEN--KDEFVECVREKV-------GFEVDVLTGEQEAKFVYMGVLQFLPV----FDRLVLSVDIGGGS 154 (577)
Q Consensus 88 ~i~~vATsA~R~A~N--~~~fl~~i~~~t-------Gl~i~VIsg~eEA~l~~~gv~~~~~~----~~~~~lviDIGGGS 154 (577)
.|+++||+|+|+|+| +++|+++|++.| |+.|+||||+|||+|+|+||...++. .++..+++||||||
T Consensus 72 ~v~~~ATaa~R~a~n~~~~~~l~~v~~~~~~~~~~~g~~v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGS 151 (353)
T 3aap_A 72 PVYFYATAGMRLLPQSQQKKYYDELEYWFRQQSQWQLVEAKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGAS 151 (353)
T ss_dssp EEEEEECHHHHTSCHHHHHHHHHHHHHHHHTCSSEEEEEEEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSE
T ss_pred cEEEEecHHHhcCcHHHHHHHHHHHHHHHhhCCCCCCCeEEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCc
Confidence 799999999999999 999999999999 99999999999999999999887642 22358999999999
Q ss_pred eEEEEeeC--CeEEE--EEEEehhHHH
Q 008124 155 TEFVIGKR--GKVVF--CESVNLGHVS 177 (577)
Q Consensus 155 tEl~~~~~--~~~~~--~~SlplG~vr 177 (577)
|||+++.. +.+.. ..|+|+|++.
T Consensus 152 tei~~~~~~~~~~~~~~~~sl~lG~~~ 178 (353)
T 3aap_A 152 VQIVFPMPKNAEISKHNQVELNIYGQN 178 (353)
T ss_dssp EEEEEECCCCTTSCGGGEEEEEETTEE
T ss_pred eEEEEecCCccccCCCceEEEEECCcc
Confidence 99999854 34444 3899999854
No 8
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=99.91 E-value=3.1e-24 Score=231.06 Aligned_cols=149 Identities=18% Similarity=0.187 Sum_probs=121.8
Q ss_pred ceEEEEEecccceEEEEEEEeCCC-CEEEEEeeeeeeee-ccCCCcCCCCCHHHHHHHHHHHHHHHHHH---HHcCCCcc
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNG-KFLTIDTLKQPVIL-GRDLSSSCSISTQSQARSVESLLMFRDII---QSHNISRD 87 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~-~~~~l~~~k~~vrL-g~~~~~~g~Ls~e~i~r~~~~L~~f~~~~---~~~~v~~~ 87 (577)
+..+|||+||||+||.|+++..+. ....+.+....+++ +.|+...+ ..++++.+.+.+|.+|+... +.++++
T Consensus 34 ~y~~vID~GSns~Rl~Vy~~~~~~~~~~~~~~~~~~~~~~~~Gls~~~-~~pe~~~~~l~~Ll~~a~~~iP~~~~~~t-- 110 (456)
T 3cj1_A 34 KYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQHSSCDVQGGGISSYA-NDPSKAGQSLVRCLEQALRDVPRDRHAST-- 110 (456)
T ss_dssp EEEEEEEECSSCEEEEEEEEETTSTTSTTCCEEEEEEECSSSCGGGGT-TSTHHHHHHTHHHHHHHHHHSCHHHHTTC--
T ss_pred eEEEEEEcCCCCeEEEEEEEcCCCCCCccceeeeeeeeeccccccccc-CCHHHHHHHHHHHHHHHHHhCCHHHcCCc--
Confidence 456799999999999999997431 12222334455677 88887766 67999999999999998753 888885
Q ss_pred cEEEEeehhhhhcC-----ChHHHHHHHHHHcC------CcEEEeChHHHHHHHHhhhhccCCCC-------------CC
Q 008124 88 HTRAVATAAVRAAE-----NKDEFVECVREKVG------FEVDVLTGEQEAKFVYMGVLQFLPVF-------------DR 143 (577)
Q Consensus 88 ~i~~vATsA~R~A~-----N~~~fl~~i~~~tG------l~i~VIsg~eEA~l~~~gv~~~~~~~-------------~~ 143 (577)
.|+++||+|+|+|+ |+++|+++|++.+| ..|+||||+|||+|+|+||...+... .+
T Consensus 111 ~v~~~ATAgmR~a~~~~~~n~~~~L~~v~~~l~~~~f~~~~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~~~~~~~~~~ 190 (456)
T 3cj1_A 111 PLYLGATAGMRLLNLTSPEATARVLEAVTQTLTQYPFDFRGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKG 190 (456)
T ss_dssp EEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHTTSSSEEEEEEECCHHHHHHHHHHHHHHHTTTTSCCEETTEECSSCCC
T ss_pred eEEEEeeHHHhhCccccHHHHHHHHHHHHHHHhhCCCCcCceEEcCchHHhhhhHHHHHhhhcccccccccccccccCCC
Confidence 69999999999998 79999999999995 68999999999999999998766421 34
Q ss_pred ceEEEEeCCCceEEEEeeCCe
Q 008124 144 LVLSVDIGGGSTEFVIGKRGK 164 (577)
Q Consensus 144 ~~lviDIGGGStEl~~~~~~~ 164 (577)
..+++|||||||||++..++.
T Consensus 191 t~gvlDlGGgStqi~~~~~~~ 211 (456)
T 3cj1_A 191 TLGAMDLGGASTQITFETTSP 211 (456)
T ss_dssp CCEEEEECSSEEEEEEECCSC
T ss_pred ceEEEEcCCCceEEEeccCCc
Confidence 579999999999999987664
No 9
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=99.81 E-value=1.6e-19 Score=193.01 Aligned_cols=148 Identities=18% Similarity=0.222 Sum_probs=117.6
Q ss_pred eEE-EEEecccceEEEEEEEeCCC-CEEEEEeeeeeeee-ccCCCcCCCCCHHHHHHHHHHHHHHHHHH---HHcCCCcc
Q 008124 14 LFA-SIDMGTSSFKLLIIRAYPNG-KFLTIDTLKQPVIL-GRDLSSSCSISTQSQARSVESLLMFRDII---QSHNISRD 87 (577)
Q Consensus 14 ~~A-vIDIGSNSirL~I~~~~~~~-~~~~l~~~k~~vrL-g~~~~~~g~Ls~e~i~r~~~~L~~f~~~~---~~~~v~~~ 87 (577)
.|| |||+|||++||.||+...+. ....+.+.....++ |.|+...+. .++++.+.++.|.+|+... +.++.+
T Consensus 34 ~y~iviDaGSsgtRl~VY~~~~~~~~~~~~~~~~~~~k~~gpGlSs~~~-~p~~~~~~l~~Ll~~a~~~vp~~~~~~t-- 110 (452)
T 3zx3_A 34 KYGIVLDAGSSHTNLYIYKWPAEKENDTGVVQQLEECQVKGPGISKYAQ-KTDEIAAYLAECMKMSTERIPASKQHQT-- 110 (452)
T ss_dssp EEEEEEEECSSCEEEEEEEEECCCTTCCCCCEEEEEEECSSSCGGGGTT-CGGGHHHHHHHHHHHHHHHSCHHHHTTC--
T ss_pred eEEEEEEcCCCCcEEEEEEEeCCcCCCccccceeeeecccCCChhccCC-CHHHHHHHHHHHHHHHHHhCCHHHcCCc--
Confidence 455 89999999999999997421 11222233445677 788877777 8899999999999998864 777875
Q ss_pred cEEEEeehhhhhcC-----ChHHHHHHHHHHc---CC---cEEEeChHHHHHHHHhhhhccCCC----CCCceEEEEeCC
Q 008124 88 HTRAVATAAVRAAE-----NKDEFVECVREKV---GF---EVDVLTGEQEAKFVYMGVLQFLPV----FDRLVLSVDIGG 152 (577)
Q Consensus 88 ~i~~vATsA~R~A~-----N~~~fl~~i~~~t---Gl---~i~VIsg~eEA~l~~~gv~~~~~~----~~~~~lviDIGG 152 (577)
.|.++||++||.++ |+++|++.|++.+ |+ .|+||||+|||.|+|+||...+.. ..+...++||||
T Consensus 111 pi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi~vnyllg~l~~~~~~t~g~lDlGG 190 (452)
T 3zx3_A 111 PVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWITINYLLGRFKTPGGSTFGALDLGG 190 (452)
T ss_dssp EEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHHHHHHHTTTTC---CCCCEEEEECS
T ss_pred cEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHHHHHhhhccccCCCCCceEEEecCC
Confidence 68999999999997 5799999999998 44 899999999999999999765532 123478999999
Q ss_pred CceEEEEeeCCe
Q 008124 153 GSTEFVIGKRGK 164 (577)
Q Consensus 153 GStEl~~~~~~~ 164 (577)
|||||++..++.
T Consensus 191 gStQi~f~~~~~ 202 (452)
T 3zx3_A 191 ASTQITFVPLNS 202 (452)
T ss_dssp SEEEEEECCSSC
T ss_pred CceEEEeccCCC
Confidence 999999876543
No 10
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.72 E-value=5.5e-17 Score=163.45 Aligned_cols=153 Identities=18% Similarity=0.226 Sum_probs=116.8
Q ss_pred CCceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHc-CCCcccE
Q 008124 11 PQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSH-NISRDHT 89 (577)
Q Consensus 11 ~~~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~-~v~~~~i 89 (577)
+++++++|||||||+|++|++ .++ +++.....+.+ ....|.+.+ ++++.++|+.|.+.+..+ +.+ ..
T Consensus 26 ~~~~~~gIDiGS~s~k~vi~~--~~~--~~l~~~~~~~~----~l~~g~i~d--~~~~~~~l~~~~~~~~~~~~~~--~~ 93 (272)
T 3h1q_A 26 PPPYKVGVDLGTADIVLVVTD--QEG--IPVAGALKWAS----VVKDGLVVD--YIGAIQIVRELKAKVERLLGSE--LF 93 (272)
T ss_dssp CSCCEEEEECCSSEEEEEEEC--TTC--CEEEEEEEECC----CCBTTBCTT--HHHHHHHHHHHHHHHHHHSSSC--CC
T ss_pred CCCEEEEEEcccceEEEEEEC--CCC--cEEEEEeeccc----ccCCCEEEc--HHHHHHHHHHHHHHHHHhcCCc--cC
Confidence 446899999999999999953 333 34444443332 123344433 466678888887777666 554 34
Q ss_pred EEEeehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEE
Q 008124 90 RAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCE 169 (577)
Q Consensus 90 ~~vATsA~R~A~N~~~fl~~i~~~tGl~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~~ 169 (577)
.+++|...+.+.|+.+++..+.+.+|+++..|+++.||...+.|.. .++++|||||||+++++.++.+.+..
T Consensus 94 ~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~--------~~~viDiGggst~~~~~~~g~~~~~~ 165 (272)
T 3h1q_A 94 QAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN--------DGIVVDIGGGTTGIAVIEKGKITATF 165 (272)
T ss_dssp EEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS--------SEEEEEECSSCEEEEEEETTEEEEEC
T ss_pred eEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC--------CEEEEEECCCcEEEEEEECCEEEEEe
Confidence 6688888888999999999999999999999999999998877641 26999999999999999999999999
Q ss_pred EEehhHHHHHHhhc
Q 008124 170 SVNLGHVSLSEKFG 183 (577)
Q Consensus 170 SlplG~vrl~e~f~ 183 (577)
++|+|..++++.+.
T Consensus 166 ~~~~Gg~~~~~~l~ 179 (272)
T 3h1q_A 166 DEPTGGTHLSLVLA 179 (272)
T ss_dssp CBSCCHHHHHHHHH
T ss_pred cCCCcHHHHHHHHH
Confidence 99999999999653
No 11
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=98.26 E-value=1.7e-05 Score=83.00 Aligned_cols=71 Identities=23% Similarity=0.206 Sum_probs=54.7
Q ss_pred HHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEEEehhHHHHHHhhc
Q 008124 112 EKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKFG 183 (577)
Q Consensus 112 ~~tGl~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~~SlplG~vrl~e~f~ 183 (577)
+..|+++..|.-+--|-....|..... ..+...+++|||||+|.++++++|.+.+..++|+|.-.+++...
T Consensus 161 ~~aGl~~~~i~~ep~Aaa~~~~~~~~~-~~~~~~~vvDiGggttdi~i~~~g~~~~~~~~~~GG~~i~~~i~ 231 (377)
T 2ych_A 161 RGAGLVPVVLDVKPFAGLYPLEARLAE-EPDRVFLVLDIGAESTSLVLLRGDKPLAVRVLTLSGKDFTEAIA 231 (377)
T ss_dssp HHTTCEEEEEEEHHHHTTGGGHHHHHT-STTCEEEEEEECSSCEEEEEEETTEEEEEEEESCSHHHHHHHHH
T ss_pred HHCCCceEEEecchHHHHHHHHhhccc-ccCCeEEEEEECCCcEEEEEEECCEEEEEEeeechHHHHHHHHH
Confidence 456888888877777765555543221 12334699999999999999999999999999999999988653
No 12
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=98.18 E-value=3.6e-05 Score=82.10 Aligned_cols=39 Identities=21% Similarity=0.203 Sum_probs=36.5
Q ss_pred ceEEEEeCCCceEEEEeeCCeEEEEEEEehhHHHHHHhh
Q 008124 144 LVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKF 182 (577)
Q Consensus 144 ~~lviDIGGGStEl~~~~~~~~~~~~SlplG~vrl~e~f 182 (577)
..+++|||||+|.++++.+|.+.++.++|+|.-.+++..
T Consensus 207 gv~vvDiGggttdisi~~~g~~~~~~~i~~GG~~it~dI 245 (419)
T 4a2a_A 207 GVVVVNLGYNFTGLIAYKNGVPIKISYVPVGMKHVIKDV 245 (419)
T ss_dssp CEEEEEECSSSEEEEEEETTEEEEEEEESCCHHHHHHHH
T ss_pred CEEEEEECCCcEEEEEEECCEEEEEEecccHHHHHHHHH
Confidence 589999999999999999999999999999999998855
No 13
>4a57_A Nucleoside-triphosphatase 1; hydrolase; 2.00A {Toxoplasma gondii} PDB: 4a59_A* 4a5a_A* 4a5b_A 3agr_A
Probab=98.12 E-value=1.3e-05 Score=85.87 Aligned_cols=74 Identities=22% Similarity=0.329 Sum_probs=57.0
Q ss_pred cEEEEeehhhhhcC--ChHHHHHHHHHHcC-------C-------cEEEeChHHHHHHHHhhhhccCCC-----------
Q 008124 88 HTRAVATAAVRAAE--NKDEFVECVREKVG-------F-------EVDVLTGEQEAKFVYMGVLQFLPV----------- 140 (577)
Q Consensus 88 ~i~~vATsA~R~A~--N~~~fl~~i~~~tG-------l-------~i~VIsg~eEA~l~~~gv~~~~~~----------- 140 (577)
.|.+.||+.||.-. -++.+++.++...- + .++||||+||+.|.|+++-.-+.-
T Consensus 158 PV~L~ATAGMRLLp~~kqd~IL~aVr~~L~~sp~~~gF~F~~~~~~vrIIsG~EEGvYgWITvNYLLG~f~~~~~~~~~~ 237 (611)
T 4a57_A 158 PVMLCSTAGVRDFHEWYRDALFVLLRHLINNPSPAHGYKFFTNPFWTRPITGAEEGLFAFITLNHLSRRLGEDPARCMID 237 (611)
T ss_dssp EEEEEECTTSTTCCTTHHHHHHHHHHHHHTSCCGGGCCCEECCTTTSEECCHHHHHHHHHHHHHHHTTCCSSSCSEEEEC
T ss_pred cEEEEeeeecccCCHHHHHHHHHHHHHHHhcCCcccCcccccCCCceeecCCccceeeEeeehhhhhccccccccccccc
Confidence 47889999999874 46778888876643 2 289999999999999998643210
Q ss_pred -------CCCceEEEEeCCCceEEEEee
Q 008124 141 -------FDRLVLSVDIGGGSTEFVIGK 161 (577)
Q Consensus 141 -------~~~~~lviDIGGGStEl~~~~ 161 (577)
.....-++|+|||||+|++.-
T Consensus 238 ~~~~~~~~~~TvG~LDLGGASTQIaF~p 265 (611)
T 4a57_A 238 EYGVKQCRNDLAGVVEVGGASAQIVFPL 265 (611)
T ss_dssp TTSCEEEECCCCEEEEECSSCEEEEEEC
T ss_pred cccccCCCCceeEEEeeCCceEEEEecc
Confidence 123468999999999999853
No 14
>2pq7_A Predicted HD superfamily hydrolase; 104161995, HD domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.45A {Uncultured thermotogales bacterium} SCOP: a.211.1.1
Probab=97.56 E-value=0.00038 Score=67.32 Aligned_cols=99 Identities=15% Similarity=0.067 Sum_probs=68.5
Q ss_pred cchhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccC---CCCchhhhHHHHHc-CCCC
Q 008124 359 RVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTS---KKGYHKQSCHIIMN-GDHL 434 (577)
Q Consensus 359 ~~~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~~I~---~~~h~~Hs~yiI~n-s~~l 434 (577)
+..|..+|+.+|..|..... .+..++.+||+|||||+..+ ...|...|+.++.. -. -
T Consensus 34 ~~~H~~rV~~~a~~la~~~~------------------~d~~~l~~AaLLHDIg~~~~~~~~~~H~~~ga~~a~~~L~-~ 94 (220)
T 2pq7_A 34 DISHTFRVMENASEIASREK------------------CDLQKAIIAALLHDIKRPHEALTGVDHAESGAEYASGLLP-T 94 (220)
T ss_dssp SHHHHHHHHHHHHHHHHHHT------------------CCHHHHHHHHHHTTTTHHHHHHHCCCHHHHHHHHHHHHGG-G
T ss_pred hHHHHHHHHHHHHHHHHHcC------------------CCHHHHHHHHHHHcCCCcccCCCcCCHHHHHHHHHHHHHH-H
Confidence 34899999999998865442 12468999999999998654 34555668887654 22 3
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCCCCchhhcCCChHHHHHHHHHHHHHHHHHHhcc
Q 008124 435 YGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQ 490 (577)
Q Consensus 435 ~G~s~~E~~~iA~i~~yhrk~~~~~~~~~~~~l~~~~~~~v~kL~~iLRlA~~Ld~ 490 (577)
.||+..+...++.++++|...... ... ...+.|++.|+.||.
T Consensus 95 ~~~~~~~i~~v~~~I~~H~~~~~~------~~~--------~~~a~Iv~dAD~Lda 136 (220)
T 2pq7_A 95 MGFDISFVAEVSKAIRSHRYSGGL------TPT--------SLTGKILQDADRLDA 136 (220)
T ss_dssp GTCCHHHHHHHHHHHHHCC-----------CCC--------SHHHHHHHHHHHGGG
T ss_pred CCCCHHHHHHHHHHHHHcCcccCC------CCC--------CHHHHHHHHhhHHhh
Confidence 689999999999999999743211 011 135678888887773
No 15
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=97.35 E-value=0.0024 Score=67.33 Aligned_cols=76 Identities=13% Similarity=0.288 Sum_probs=46.2
Q ss_pred HHHHHHHHcCCcE-EEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEe--eCCeEE---EEEEEehhHHHHH
Q 008124 106 FVECVREKVGFEV-DVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIG--KRGKVV---FCESVNLGHVSLS 179 (577)
Q Consensus 106 fl~~i~~~tGl~i-~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~--~~~~~~---~~~SlplG~vrl~ 179 (577)
.+..+-+..|+++ .+++..+-|-+.| +........+...+|+|+|||+|.++++ .++.+. .....++|...+.
T Consensus 168 ~~~~a~~~AGl~~~~li~Ep~AAa~~~-~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d 246 (409)
T 4gni_A 168 ALIAAAAAADLEVLQLISEPAAAVLAY-DARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALD 246 (409)
T ss_dssp HHHHHHHHTTCEEEEEEEHHHHHHHHT-TC------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHH
T ss_pred HHHHHHHHcCCCeEEEEcCHHHHHHHH-hcccccCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHH
Confidence 3444455679996 4566555554444 4332111134568999999999999985 454333 2235899998887
Q ss_pred Hhh
Q 008124 180 EKF 182 (577)
Q Consensus 180 e~f 182 (577)
+.+
T Consensus 247 ~~i 249 (409)
T 4gni_A 247 KVL 249 (409)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 16
>3tm8_A BD1817, uncharacterized protein; HD-GYP, phosphodiesterase, unknown function, hydrolase,signa protein; 1.28A {Bdellovibrio bacteriovorus} PDB: 3tmb_A 3tmc_A 3tmd_A
Probab=96.98 E-value=0.0023 Score=65.75 Aligned_cols=102 Identities=14% Similarity=0.230 Sum_probs=66.5
Q ss_pred hhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHH-HHHHHHHhhcccccCCC------------------Cch
Q 008124 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEY-LEAACLLHNIGHFTSKK------------------GYH 421 (577)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~L-L~~Aa~LHdIG~~I~~~------------------~h~ 421 (577)
.|+.+|+.+|..|-.++ |+ ++.+... |.+||+|||||+..-+. .|.
T Consensus 169 ~Hs~~Va~la~~la~~l----gl-----------~~~~~~~~l~~aaLLHDIGk~~ip~~il~k~~~L~~~E~~~~~~H~ 233 (328)
T 3tm8_A 169 HHGVTVSTLSIALAQKL----GI-----------TDPKKTQLLTLGALLHDYGHHHSPLNLNQPLDSMSPEDLALWKKHP 233 (328)
T ss_dssp HHHHHHHHHHHHHHHHH----TC-----------CCHHHHHHHHHHHHHTTGGGTTCSCCCSSCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHc----Cc-----------CHHHHHHHHHHHHHHhcCCcccCCHHHHhCCCCCCHHHHHHHHHHH
Confidence 79999999999865443 43 4455566 99999999999884332 388
Q ss_pred hhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCCchhhcCCChHHHHHHHHHHHHHHHHHHhcc
Q 008124 422 KQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQ 490 (577)
Q Consensus 422 ~Hs~yiI~ns~~l~G~s~~E~~~iA~i~~yhrk~~~~~~~~~~~~l~~~~~~~v~kL~~iLRlA~~Ld~ 490 (577)
..++.+++.. .|++ ..++.++++|.......- ...|..++ +-.++.|+.+|+.+|.
T Consensus 234 ~~G~~~ll~~---~~~~----~~v~~~i~~HHEr~dGsG---P~gl~g~~---I~~~arIv~vaD~~da 289 (328)
T 3tm8_A 234 IEGAQKVQDK---KHFD----QTVINIIGQHEETINGTG---PKGLREKD---MDPLAVLVSSANAMDR 289 (328)
T ss_dssp HHHHHHHTTC---TTSC----HHHHHHHHHTTCCTBSCS---TTCCBGGG---SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh---CCCc----HHHHHHHHHhcCCCCCCC---CCCCCccc---CCHHHHHHHHHHHHHH
Confidence 8898855443 3455 456777888864443321 12233332 3346778888887764
No 17
>3ccg_A HD superfamily hydrolase; NP_347894.1, HD domain, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.50A {Clostridium acetobutylicum atcc 824}
Probab=96.83 E-value=0.0025 Score=60.12 Aligned_cols=93 Identities=13% Similarity=0.091 Sum_probs=62.2
Q ss_pred hhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCC-----------------------
Q 008124 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSK----------------------- 417 (577)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~~I~~----------------------- 417 (577)
.|+..|+.+|..| +..+|+ ++ ..+..|++|||||+...+
T Consensus 22 ~Hs~~Va~~A~~l----A~~~g~-----------d~---~~~~~AgLLHDiGk~~~~~~il~~~~~~~~~l~~~E~~~~~ 83 (190)
T 3ccg_A 22 KHSLGVMDTAVRL----AGIYNE-----------DT---EKARIAGLVHDCAKKLPGEKIIEICTNEGYELGDEDIRNSY 83 (190)
T ss_dssp HHHHHHHHHHHHH----HHHHTC-----------CH---HHHHHHHHHTTTTTTSCHHHHHHHHHHTTCCCCHHHHTTTT
T ss_pred HHHHHHHHHHHHH----HHHHCc-----------CH---HHHHHHHHHHHhcCCCCHHHHHHHHHHcCCCCCHHHHhHHH
Confidence 7999999999975 444443 22 348899999999987542
Q ss_pred CCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCCchhhcCCChHHHHHHHHHHHHHHHHHHhccccC
Q 008124 418 KGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQNDC 493 (577)
Q Consensus 418 ~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~~yhrk~~~~~~~~~~~~l~~~~~~~v~kL~~iLRlA~~Ld~s~~ 493 (577)
..|...+++++.+. .|+++++ ++..+++|....|. . ..++.|+.+|+.++..|.
T Consensus 84 ~~H~~~Ga~il~~~---~~~~~~~---i~~aI~~Hh~g~~~--------~--------~~~~~Iv~vAD~i~~~R~ 137 (190)
T 3ccg_A 84 LLHGLAGRILAKKV---IGIDDED---VLNAIEFHTTGRPN--------M--------SLLEKIIYIADYIEPGRE 137 (190)
T ss_dssp C-CHHHHHHHHHHT---TCCCCHH---HHHHHHTTTTCCSS--------C--------CHHHHHHHHHHHHSTTCC
T ss_pred cchHHHHHHHHHHh---cCCCcHH---HHHHHHHhcCCCCC--------C--------CHHHHHHHHHHhCCCCCC
Confidence 24777788887662 4664433 45566777643221 1 237789999999876665
No 18
>3b57_A LIN1889 protein; Q92AN1, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 3.00A {Listeria innocua CLIP11262} SCOP: a.211.1.1
Probab=96.78 E-value=0.0051 Score=58.92 Aligned_cols=77 Identities=17% Similarity=0.123 Sum_probs=48.9
Q ss_pred chhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCCH
Q 008124 360 VKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYST 439 (577)
Q Consensus 360 ~~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~~I~~~~h~~Hs~yiI~ns~~l~G~s~ 439 (577)
..|..+|.++|..|-... + .+..++.+||+|||||......+ +..|+.++..--.=.|++.
T Consensus 27 ~~H~~rV~~~a~~ia~~~----~--------------~d~~~v~~AAlLHDig~~~~~~~-~~~~a~~a~~~L~~~g~~~ 87 (209)
T 3b57_A 27 WSHIKRVWKLSKEIQSKE----G--------------GDLFTIELAALFHDYSDIKLTTD-EQEATKTLINWMETKEIPS 87 (209)
T ss_dssp HHHHHHHHHHHHHHHHHH----C--------------SCHHHHHHHHHHTTCCC--------CHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHHHHHHHHHHHc----C--------------CCHHHHHHHHHHhccCcccCCCc-hHHHHHHHHHHHHHCCCCH
Confidence 489999999999874332 2 13478999999999998754433 2234444322100158999
Q ss_pred HHHHHHHHHHHhccCC
Q 008124 440 DEIKLIALLTRFHRKK 455 (577)
Q Consensus 440 ~E~~~iA~i~~yhrk~ 455 (577)
.+...|..++..|+.+
T Consensus 88 ~~~~~V~~~I~~Hs~~ 103 (209)
T 3b57_A 88 ELIKKIIRIIQSVSFK 103 (209)
T ss_dssp HHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHcCcc
Confidence 9999999999998644
No 19
>2o08_A BH1327 protein; putative HD superfamily hydrolase, structural genomics, JOIN for structural genomics, JCSG; HET: UNL PG4 DGI; 1.90A {Bacillus halodurans}
Probab=96.74 E-value=0.0053 Score=57.72 Aligned_cols=93 Identities=17% Similarity=0.222 Sum_probs=61.8
Q ss_pred hhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccC----------------------CC
Q 008124 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTS----------------------KK 418 (577)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~~I~----------------------~~ 418 (577)
.|+..|+.+|..| +..+|+ ++ ..+..|++|||||+... ..
T Consensus 21 ~Hs~~Va~~A~~l----A~~~g~-----------~~---~~~~~agLLHDIGk~~~~~~il~~~~~~~~~l~~~e~~~~~ 82 (188)
T 2o08_A 21 QHTIGVMETAIDL----AKLYGA-----------DQ---QKAELAAIFHDYAKFRDKNEMRTLIREKLSQQDILFYGDEL 82 (188)
T ss_dssp HHHHHHHHHHHHH----HHHHTC-----------CH---HHHHHHHHHTTTTTTSCHHHHHHHHHHHCSCCGGGGSCGGG
T ss_pred HHHHHHHHHHHHH----HHHHCc-----------CH---HHHHHHHHHHHHcCCCCHHHHHHHHHhcCCCCCHHHHHHHh
Confidence 7999999999975 444443 22 35889999999999832 13
Q ss_pred CchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCCchhhcCCChHHHHHHHHHHHHHHHHHHhccccC
Q 008124 419 GYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQNDC 493 (577)
Q Consensus 419 ~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~~yhrk~~~~~~~~~~~~l~~~~~~~v~kL~~iLRlA~~Ld~s~~ 493 (577)
.|...+++++... .|+++++ +...+++|....|. ...++.|+.+|+.++..|.
T Consensus 83 ~H~~~G~~il~~~---~~~~~~~---i~~aI~~Hh~g~~~----------------~~~~~~Iv~vAD~i~~~r~ 135 (188)
T 2o08_A 83 LHAPCGAYYVREE---VGIEDED---VLQAIRFHTTGRPN----------------MSLLEKIIFLADYIEPNRQ 135 (188)
T ss_dssp SHHHHHHHHHHHH---HCCCCHH---HHHHHHTTTTCCTT----------------CCHHHHHHHHHHHHSTTCC
T ss_pred hHHHHHHHHHHHc---cCCChHH---HHHHHHHhccCCCC----------------CCHHHHhhhhhccCCCCCC
Confidence 5777788887652 3553332 44566677642221 1237789999999876664
No 20
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=96.71 E-value=0.0054 Score=66.10 Aligned_cols=77 Identities=17% Similarity=0.172 Sum_probs=64.9
Q ss_pred hHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEEEehhHHHHHHhh
Q 008124 103 KDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKF 182 (577)
Q Consensus 103 ~~~fl~~i~~~tGl~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~~SlplG~vrl~e~f 182 (577)
-+.+.+.+++.+|++++|=. -|++-+-+|++..-. .+-...++|||||||.++++.+|.+.++.++|+|.-.+|...
T Consensus 370 m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE-~eLGvaiIDmGGGTTd~sVf~~G~lv~a~~ip~gG~~VT~DI 446 (610)
T 2d0o_A 370 MAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPG-TTRPLAILDLGAGSTDASIINPKGDIIATHLAGAGDMVTMII 446 (610)
T ss_dssp HHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTT-CCSSEEEEEECSSEEEEEEECTTCCEEEEEEECSHHHHHHHH
T ss_pred HHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC-CcCCeEEEEeCCCcceEEEEcCCcEEEEEEeccchHHHHHHH
Confidence 46688889988899888766 788888888876432 344589999999999999999999999999999999988754
No 21
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=96.61 E-value=0.011 Score=62.43 Aligned_cols=98 Identities=11% Similarity=0.063 Sum_probs=62.4
Q ss_pred cCCCcccEEEEeeh-hhhhcCChHHHHHHHHHHcCCcEE-EeChHHHHHHHHhhhhc--cCCCCCCceEEEEeCCCceEE
Q 008124 82 HNISRDHTRAVATA-AVRAAENKDEFVECVREKVGFEVD-VLTGEQEAKFVYMGVLQ--FLPVFDRLVLSVDIGGGSTEF 157 (577)
Q Consensus 82 ~~v~~~~i~~vATs-A~R~A~N~~~fl~~i~~~tGl~i~-VIsg~eEA~l~~~gv~~--~~~~~~~~~lviDIGGGStEl 157 (577)
.++++....+|-|. +.-...+++.+.+.+.+..|++.- ++.... ++.+++.. .++..+..++|+|+|||.|.+
T Consensus 101 L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~---aa~~a~~~~~~~~~~~~~glVvDiG~gtt~v 177 (418)
T 1k8k_A 101 LRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAV---LALAASWTSRQVGERTLTGTVIDSGDGVTHV 177 (418)
T ss_dssp TCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHH---HHHHHGGGSTTCCSCCCCEEEEEESSSCEEE
T ss_pred cCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHH---HHhhhhhcccccCCCCCeEEEEEcCCCceEE
Confidence 45554444445553 333334555666666677899854 444333 33333211 222122368999999999999
Q ss_pred EEeeCCeEEEE--EEEehhHHHHHHhh
Q 008124 158 VIGKRGKVVFC--ESVNLGHVSLSEKF 182 (577)
Q Consensus 158 ~~~~~~~~~~~--~SlplG~vrl~e~f 182 (577)
+.+.+|.++.. ..+++|.-.+++.+
T Consensus 178 ~~v~~G~~~~~~~~~~~lGG~~lt~~l 204 (418)
T 1k8k_A 178 IPVAEGYVIGSCIKHIPIAGRDITYFI 204 (418)
T ss_dssp EEEETTEECGGGCEEESCSHHHHHHHH
T ss_pred EEeECCEEcccceEEEeCcHHHHHHHH
Confidence 99999988766 88999998888754
No 22
>2qgs_A Protein Se1688; alpha-helical protein, structural genomics, PSI-2, protein S initiative, northeast structural genomics consortium; 2.00A {Staphylococcus epidermidis} SCOP: a.211.1.1
Probab=96.51 E-value=0.014 Score=56.62 Aligned_cols=79 Identities=10% Similarity=-0.001 Sum_probs=50.4
Q ss_pred cchhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCC
Q 008124 359 RVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYS 438 (577)
Q Consensus 359 ~~~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~~I~~~~h~~Hs~yiI~ns~~l~G~s 438 (577)
+..|..+|.++|..|. ....+. +..++.+||+|||||..... +...|..+...--.=.|++
T Consensus 26 ~~~H~~rV~~~a~~i~---a~~~~~--------------d~~~l~lAAlLHDigk~~~~--~~~~ga~~a~~~L~~~g~~ 86 (225)
T 2qgs_A 26 DIAHVERVYNNACYIA---KRENIT--------------DTLVIELSSLLHDTVDSKLT--DEILAYDQLKQFLSTLDLS 86 (225)
T ss_dssp HHHHHHHHHHHHHHHH---HHTTCS--------------CCHHHHHHHHHTTTTCCSSS--CHHHHHHHHHHHHHTTTCC
T ss_pred CHHHHHHHHHHHHHHH---hhccCC--------------CHHHHHHHHHHHcCCCCCCC--cHHHHHHHHHHHHHHCCCC
Confidence 3379999999998762 222221 23689999999999984322 3444443322110025899
Q ss_pred HHHHHHHHHHHHhccCCC
Q 008124 439 TDEIKLIALLTRFHRKKF 456 (577)
Q Consensus 439 ~~E~~~iA~i~~yhrk~~ 456 (577)
..+...|..++++|+.+.
T Consensus 87 ~~~i~~V~~~I~~Hs~~~ 104 (225)
T 2qgs_A 87 SEISQQVLYIIKHMSYRA 104 (225)
T ss_dssp HHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHcCccc
Confidence 999999999999886443
No 23
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=96.51 E-value=0.0061 Score=65.90 Aligned_cols=76 Identities=18% Similarity=0.112 Sum_probs=64.2
Q ss_pred HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEEEehhHHHHHHhh
Q 008124 104 DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKF 182 (577)
Q Consensus 104 ~~fl~~i~~~tGl~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~~SlplG~vrl~e~f 182 (577)
+.+.+.+++.+|++++|=. -|++-+-+|++..-. .+-...++|||||||.++++.+|.+.++.++|+|.-.+|...
T Consensus 373 ~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE-~elGvaiIDmGgGTTd~sVf~~g~lv~a~~ip~gG~~VT~DI 448 (607)
T 1nbw_A 373 QVIARELSARLQTEVVVGG--VEANMAIAGALTTPG-CAAPLAILDLGAGSTDAAIVNAEGQITAVHLAGAGNMVSLLI 448 (607)
T ss_dssp CCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTT-CCSSEEEEEECSSEEEEEEECSSSCEEEEEEECCHHHHHHHH
T ss_pred HHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC-CcCCeEEEEeCCCcceEEEEcCCcEEEEEEeccchHHHHHHH
Confidence 4478888888899998866 888888888876432 344589999999999999999999999999999999988754
No 24
>3dto_A BH2835 protein; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Bacillus halodurans} SCOP: a.211.1.1
Probab=96.50 E-value=0.0097 Score=57.62 Aligned_cols=78 Identities=15% Similarity=0.028 Sum_probs=49.3
Q ss_pred cchhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCC
Q 008124 359 RVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYS 438 (577)
Q Consensus 359 ~~~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~~I~~~~h~~Hs~yiI~ns~~l~G~s 438 (577)
+..|..+|.++|..|-... + .+..++.+||+|||||..- +.+|..-++-++..--.=.||+
T Consensus 26 ~~~H~~rV~~~a~~ia~~~----~--------------~d~~~l~~AalLHDig~~k-~~~~~~~ga~~a~~~L~~~g~~ 86 (223)
T 3dto_A 26 DWYHIRRVTLMAKAIGEQE----K--------------VDVFVVQIAALFHDLIDDK-LVDDPETAKQQLIDWMEAAGVP 86 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHT----T--------------CCHHHHHHHHHHHSTTC--------CHHHHHHHHHHHTTTCC
T ss_pred cHHHHHHHHHHHHHHHHHc----C--------------CCHHHHHHHHHHhhccccc-cCCCHHHHHHHHHHHHHHcCCC
Confidence 4489999999999875421 2 1357899999999999753 3333344443332110026899
Q ss_pred HHHHHHHHHHHHhccCC
Q 008124 439 TDEIKLIALLTRFHRKK 455 (577)
Q Consensus 439 ~~E~~~iA~i~~yhrk~ 455 (577)
..+...|..++..|+.+
T Consensus 87 ~~~i~~V~~~I~~Hs~~ 103 (223)
T 3dto_A 87 SQKIDHTMDIINTISFK 103 (223)
T ss_dssp HHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHcCCc
Confidence 99999999999988643
No 25
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=96.50 E-value=0.031 Score=58.10 Aligned_cols=109 Identities=17% Similarity=0.199 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHc-CCCcccEEEEeehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEE
Q 008124 70 ESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSV 148 (577)
Q Consensus 70 ~~L~~f~~~~~~~-~v~~~~i~~vATsA~R~A~N~~~fl~~i~~~tGl~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lvi 148 (577)
..|+..++.++.+ +.+..++ +++.-+.=.-.+++.+.+.+ +..|+++-.+--|=+|-..+.|.... ..+...+|+
T Consensus 136 ~~l~~l~~~a~~~~~~~~~~~-vitvP~~~~~~~r~~~~~a~-~~aGl~~~~li~Ep~Aaa~~~~~~~~--~~~~~vlV~ 211 (394)
T 3qfu_A 136 MILGKMKQIAEDYLGTKVTHA-VVTVPAYFNDAQRQATKDAG-TIAGLNVLRIVNEPTAAAIAYGLDKS--DKEHQIIVY 211 (394)
T ss_dssp HHHHHHHHHHHHHHTSCCCEE-EEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTTTSC--SSCEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcceE-EEEECCCCCHHHHHHHHHHH-HHcCCceEEEecCHHHHHHHHhhccC--CCCceEEEE
Confidence 3455666666555 4432222 23322222222233444444 66899965444444444444443322 124457999
Q ss_pred EeCCCceEEEEee--CCeEE---EEEEEehhHHHHHHhh
Q 008124 149 DIGGGSTEFVIGK--RGKVV---FCESVNLGHVSLSEKF 182 (577)
Q Consensus 149 DIGGGStEl~~~~--~~~~~---~~~SlplG~vrl~e~f 182 (577)
|+|||+|.+++++ ++.+. ...+.++|...+.+.+
T Consensus 212 D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l 250 (394)
T 3qfu_A 212 DLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKI 250 (394)
T ss_dssp EECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred EcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHH
Confidence 9999999999886 33322 1455789988887654
No 26
>2ogi_A Hypothetical protein SAG1661; structural genomics, joint center for structural genomics, J protein structure initiative; HET: GDP MES; 1.85A {Streptococcus agalactiae serogroup V}
Probab=96.48 E-value=0.0072 Score=57.23 Aligned_cols=94 Identities=15% Similarity=0.046 Sum_probs=62.0
Q ss_pred chhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCC----------------------
Q 008124 360 VKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSK---------------------- 417 (577)
Q Consensus 360 ~~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~~I~~---------------------- 417 (577)
..|+..|+.+|..| +...|+ ++ ..+..|++|||||+...+
T Consensus 28 ~~Hs~~Va~~A~~l----A~~~g~-----------d~---~~~~~AgLLHDIGK~~~~~~il~~~~~~~~~l~~~E~~~~ 89 (196)
T 2ogi_A 28 FNHVLGVERAAIEL----AERYGY-----------DK---EKAGLAALLHDYAKELSDDEFLRLIDKYQPDPDLKKWGNN 89 (196)
T ss_dssp HHHHHHHHHHHHHH----HHHHTC-----------CH---HHHHHHHHHTTTTTTCCHHHHHHHHHHHCCCTGGGGSCHH
T ss_pred HHHHHHHHHHHHHH----HHHHCc-----------CH---HHHHHHHHHHHcCCcCCHHHHHHHHHhcCCCCCHHHHHHH
Confidence 37999999999975 444443 22 358899999999998432
Q ss_pred CCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCCchhhcCCChHHHHHHHHHHHHHHHHHHhccccC
Q 008124 418 KGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQNDC 493 (577)
Q Consensus 418 ~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~~yhrk~~~~~~~~~~~~l~~~~~~~v~kL~~iLRlA~~Ld~s~~ 493 (577)
..|...+++++... .|+++++ ++..+++|....|. . ..++.|+.+|+.++..|.
T Consensus 90 ~~H~~~G~~ll~~~---~~~~~~~---i~~aI~~Hh~g~~~--------~--------~~~~~Iv~vAD~i~~~R~ 143 (196)
T 2ogi_A 90 IWHGLVGIYKIQED---LAIKDQD---ILAAIAKHTVGSAQ--------M--------STLDKIVYVADYIEHNRD 143 (196)
T ss_dssp HHHHHTHHHHHHHH---SCCCCHH---HHHHHHTTTTCCSS--------C--------CHHHHHHHHHHHHCTTCC
T ss_pred hccHHHHHHHHHHc---cCCCcHH---HHHHHHHhcCCCCC--------C--------CHHHHhhhhheecCCCCC
Confidence 23667778877652 4564333 45566777643221 1 237789999999876664
No 27
>2pjq_A Uncharacterized protein LP_2664; LPR71, NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Lactobacillus plantarum WCFS1} SCOP: a.211.1.1
Probab=96.38 E-value=0.006 Score=59.43 Aligned_cols=78 Identities=10% Similarity=0.025 Sum_probs=49.0
Q ss_pred cchhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCC
Q 008124 359 RVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYS 438 (577)
Q Consensus 359 ~~~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~~I~~~~h~~Hs~yiI~ns~~l~G~s 438 (577)
+..|..+|.++|..|-... + .+..++.+||+|||||..- +.++...+..+...--.=.||+
T Consensus 31 ~~~H~~rV~~~a~~ia~~~----~--------------~d~~ll~lAAlLHDigk~k-~~~~~~~ga~~a~~~L~~~g~~ 91 (231)
T 2pjq_A 31 GRDHLQRVNRLARRLAKDE----G--------------ANLNLTLAAAWLHDVIDDK-LMANPAKAHQDLIVQLNAQNVT 91 (231)
T ss_dssp SHHHHHHHHHHHHHHHHHH----T--------------CCHHHHHHHHHHHHHHC----------CHHHHHHHHHTTTCC
T ss_pred CHHHHHHHHHHHHHHHHHc----C--------------CCHHHHHHHHHHHcCCccc-CCChHHHHHHHHHHHHHHCCCC
Confidence 3489999999999874332 2 1347899999999999842 2233233333322110015899
Q ss_pred HHHHHHHHHHHHhccCC
Q 008124 439 TDEIKLIALLTRFHRKK 455 (577)
Q Consensus 439 ~~E~~~iA~i~~yhrk~ 455 (577)
..+...|..++..|+.+
T Consensus 92 ~~~~~~V~~~I~~Hs~~ 108 (231)
T 2pjq_A 92 ADDQTAIFAIIDHMSFS 108 (231)
T ss_dssp HHHHHHHHHHHTSCCTG
T ss_pred HHHHHHHHHHHHHcCCc
Confidence 99999999999988643
No 28
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=96.31 E-value=0.026 Score=58.78 Aligned_cols=93 Identities=15% Similarity=0.157 Sum_probs=61.5
Q ss_pred HcCCCcccEEEEeehh-hhhcCChHHHHHHHHHHcCCcE-EEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEE
Q 008124 81 SHNISRDHTRAVATAA-VRAAENKDEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFV 158 (577)
Q Consensus 81 ~~~v~~~~i~~vATsA-~R~A~N~~~fl~~i~~~tGl~i-~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~ 158 (577)
..++++.+..++-|.. .-...+++.+.+.+.+..|++. .++. |+-++.+|.- . ..++|+|+|||.|.++
T Consensus 93 ~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~---e~~aaa~a~g--~----~~~lVvDiG~gtt~v~ 163 (375)
T 2fxu_A 93 ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI---QAVLSLYASG--R----TTGIVLDSGDGVTHNV 163 (375)
T ss_dssp TSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEE---HHHHHHHHTT--C----SSEEEEEECSSCEEEE
T ss_pred hcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEcc---chheeeeecC--C----CeEEEEEcCCCceEEe
Confidence 3466544433454433 3333455567777777789874 4444 4444444422 1 3489999999999999
Q ss_pred EeeCCeEEE--EEEEehhHHHHHHhh
Q 008124 159 IGKRGKVVF--CESVNLGHVSLSEKF 182 (577)
Q Consensus 159 ~~~~~~~~~--~~SlplG~vrl~e~f 182 (577)
.+.+|.+.. ..++|+|.-.+++.+
T Consensus 164 ~v~~G~~~~~~~~~~~~GG~~lt~~l 189 (375)
T 2fxu_A 164 PIYEGYALPHAIMRLDLAGRDLTDYL 189 (375)
T ss_dssp EEETTEECGGGCEEESCCHHHHHHHH
T ss_pred EeECCEEeccceEEeccCHHHHHHHH
Confidence 999998776 578999998887744
No 29
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=96.23 E-value=0.049 Score=56.97 Aligned_cols=110 Identities=16% Similarity=0.228 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHc-CCCcccEEEEeehhhhhcCChHHHHHHHHHHcCCcE-EEeChHHHHHHHHhhhhccCCC-CCCceE
Q 008124 70 ESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQFLPV-FDRLVL 146 (577)
Q Consensus 70 ~~L~~f~~~~~~~-~v~~~~i~~vATsA~R~A~N~~~fl~~i~~~tGl~i-~VIsg~eEA~l~~~gv~~~~~~-~~~~~l 146 (577)
..|+..++.++.+ +.+..++ +++--|.=....++.+ ..+-+..|+++ .+++..+-|-+.| +.....+. .+...+
T Consensus 141 ~~L~~l~~~a~~~~~~~~~~~-vitvPa~~~~~~r~~~-~~a~~~AGl~~~~li~Ep~AAa~~~-~~~~~~~~~~~~~vl 217 (404)
T 3i33_A 141 MVLTKMKEIAEAYLGGKVHSA-VITVPAYFNDSQRQAT-KDAGTITGLNVLRIINEPTAAAIAY-GLDKKGCAGGEKNVL 217 (404)
T ss_dssp HHHHHHHHHHHHHHSSCCCEE-EEEECTTCCHHHHHHH-HHHHHHHTCEEEEEEEHHHHHHHHT-TTTSSCSSSSCCEEE
T ss_pred HHHHHHHHHHHHHhccCCCcE-EEEECCCCCHHHHHHH-HHHHHHcCCCeEEEeccHHHHHHHH-HhhcccccCCCceEE
Confidence 3455555555544 4432222 2332222222223334 44455679985 4565555554443 43332221 235589
Q ss_pred EEEeCCCceEEEEee--CCeEE---EEEEEehhHHHHHHhh
Q 008124 147 SVDIGGGSTEFVIGK--RGKVV---FCESVNLGHVSLSEKF 182 (577)
Q Consensus 147 viDIGGGStEl~~~~--~~~~~---~~~SlplG~vrl~e~f 182 (577)
|+|+|||+|.+++++ ++.+. ...+.++|.-.+.+.+
T Consensus 218 V~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l 258 (404)
T 3i33_A 218 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 258 (404)
T ss_dssp EEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred EEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHH
Confidence 999999999999885 44332 2445789988777654
No 30
>3djb_A Hydrolase, HD family; all alpha-helical protein., structural genomics, PSI-2, protein structure initiative; 2.90A {Bacillus thuringiensis serovarkonkukian} SCOP: a.211.1.1
Probab=95.89 E-value=0.014 Score=56.59 Aligned_cols=78 Identities=13% Similarity=0.027 Sum_probs=52.2
Q ss_pred cchhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCC
Q 008124 359 RVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYS 438 (577)
Q Consensus 359 ~~~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~~I~~~~h~~Hs~yiI~ns~~l~G~s 438 (577)
+..|..+|.++|..|-. ..+ .+..++.+||+|||||.. -+.+|..-|+-++..--.=.||+
T Consensus 26 ~~~H~~rV~~~a~~ia~----~~~--------------~d~~~l~~AAlLHDig~~-k~~~h~~~ga~~a~~~L~~~g~~ 86 (223)
T 3djb_A 26 DWYHIRRVHKMAISLSE----QEG--------------GNRFIIEMAALLHDVADE-KLNESEEAGMKKVSDWLEELHVE 86 (223)
T ss_dssp THHHHHHHHHHHHHHHT----TTC--------------SCHHHHHHHHTTHHHHC---CCSSSTTTHHHHHHHHHHTCCC
T ss_pred cHHHHHHHHHHHHHHHH----HcC--------------CCHHHHHHHHHHhhcccc-ccCCcHHHHHHHHHHHHHHCCCC
Confidence 44899999999998632 212 235799999999999984 33344555543332210016899
Q ss_pred HHHHHHHHHHHHhccCC
Q 008124 439 TDEIKLIALLTRFHRKK 455 (577)
Q Consensus 439 ~~E~~~iA~i~~yhrk~ 455 (577)
..+...|..++..|+.+
T Consensus 87 ~~~i~~V~~~I~~Hs~~ 103 (223)
T 3djb_A 87 EEESKHVLHIIANMSYK 103 (223)
T ss_dssp HHHHHHHHHHTTCCC--
T ss_pred HHHHHHHHHHHHHhCCc
Confidence 99999999999988643
No 31
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=95.87 E-value=0.14 Score=55.56 Aligned_cols=108 Identities=16% Similarity=0.236 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHc-CCCcccEEEEeehhhhhcCChHHHHHHHHHHcCCcEE-EeChHHHHHHHHhhhhccCCCCCCceE
Q 008124 69 VESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVD-VLTGEQEAKFVYMGVLQFLPVFDRLVL 146 (577)
Q Consensus 69 ~~~L~~f~~~~~~~-~v~~~~i~~vATsA~R~A~N~~~fl~~i~~~tGl~i~-VIsg~eEA~l~~~gv~~~~~~~~~~~l 146 (577)
...|+..++.++.+ +.+..++ +++--|.=....++...+. -+..|+++- +++...=|.+. .|.-.. .+...+
T Consensus 91 a~~L~~l~~~ae~~l~~~~~~~-VitvPa~~~~~qr~a~~~a-~~~AGl~~~~li~Ep~AAAla-y~~~~~---~~~~vl 164 (509)
T 2v7y_A 91 AIILQYLKSYAEDYLGEPVTRA-VITVPAYFNDAQRQATKDA-GRIAGLEVERIINEPTAAALA-YGLDKE---EDQTIL 164 (509)
T ss_dssp HHHHHHHHHHHHHHHTSCCCEE-EEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHH-TTGGGS---CSEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCeE-EEEECCCCCHHHHHHHHHH-HHHcCCCeEEEecCHHHHHHH-HhhccC---CCCEEE
Confidence 34466666665553 4332222 2322221111123344444 456799865 55544444443 343321 245689
Q ss_pred EEEeCCCceEEEEee--CCeEE---EEEEEehhHHHHHHhh
Q 008124 147 SVDIGGGSTEFVIGK--RGKVV---FCESVNLGHVSLSEKF 182 (577)
Q Consensus 147 viDIGGGStEl~~~~--~~~~~---~~~SlplG~vrl~e~f 182 (577)
|+|+|||+|.+++++ ++.+. .....++|...+.+.+
T Consensus 165 V~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l 205 (509)
T 2v7y_A 165 VYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVI 205 (509)
T ss_dssp EEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred EEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHH
Confidence 999999999999887 45432 1345689988777654
No 32
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=95.74 E-value=0.13 Score=56.48 Aligned_cols=108 Identities=20% Similarity=0.304 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHc-CCCcccEEEEee-hh-hhhcCChHHHHHHHHHHcCCcEE-EeChHHHHHHHHhhhhccCCCCCCc
Q 008124 69 VESLLMFRDIIQSH-NISRDHTRAVAT-AA-VRAAENKDEFVECVREKVGFEVD-VLTGEQEAKFVYMGVLQFLPVFDRL 144 (577)
Q Consensus 69 ~~~L~~f~~~~~~~-~v~~~~i~~vAT-sA-~R~A~N~~~fl~~i~~~tGl~i~-VIsg~eEA~l~~~gv~~~~~~~~~~ 144 (577)
...|+..++.++.+ |-+.. .+|-| -| +-+ ..++.+.+ +-+..|+++- +++...-|.+.| |.-...+ .+..
T Consensus 121 a~~L~~lk~~ae~~lg~~v~--~~VitVPa~f~~-~qr~a~~~-A~~~AGl~~~~li~EP~AAAlay-~~~~~~~-~~~~ 194 (554)
T 1yuw_A 121 SMVLTKMKEIAEAYLGKTVT--NAVVTVPAYFND-SQRQATKD-AGTIAGLNVLRIINEPTAAAIAY-GLDKKVG-AERN 194 (554)
T ss_dssp HHHHHHHHHHHHHHHSSCCC--EEEEEECTTCCH-HHHHHHHH-HHHTTTCEEEEEEEHHHHHHHHT-TCSTTCS-SCEE
T ss_pred HHHHHHHHHHHHHHhCCCCC--eEEEEECCCCCH-HHHHHHHH-HHHHcCCCeEEEeCcHHHHHHHH-HhhccCC-CCcE
Confidence 34456666656554 43322 23333 11 111 11233444 4456799864 556555554443 4332211 2356
Q ss_pred eEEEEeCCCceEEEEee--CCeEE---EEEEEehhHHHHHHhh
Q 008124 145 VLSVDIGGGSTEFVIGK--RGKVV---FCESVNLGHVSLSEKF 182 (577)
Q Consensus 145 ~lviDIGGGStEl~~~~--~~~~~---~~~SlplG~vrl~e~f 182 (577)
.+|+|+|||+|.+++++ +|.+. ...+.++|.-.+.+.+
T Consensus 195 vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l 237 (554)
T 1yuw_A 195 VLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRM 237 (554)
T ss_dssp EEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred EEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHH
Confidence 89999999999999987 66543 4456688887766543
No 33
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=95.73 E-value=0.096 Score=53.47 Aligned_cols=76 Identities=20% Similarity=0.243 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHcCCcEE-EeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEEEehhHHHHHHh
Q 008124 103 KDEFVECVREKVGFEVD-VLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEK 181 (577)
Q Consensus 103 ~~~fl~~i~~~tGl~i~-VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~~SlplG~vrl~e~ 181 (577)
++.+.+ +-+..|+++- +++...=|.+.| |.- .. .+...+|+|+|||+|.++++..+.+....++++|.-.+++.
T Consensus 111 r~~~~~-a~~~aG~~~~~li~ep~Aaa~~~-~~~--~~-~~~~~lVvDiGggttdvsv~~~~~~~~~~~~~lGG~~id~~ 185 (344)
T 1jce_A 111 RRAILD-AGLEAGASKVFLIEEPMAAAIGS-NLN--VE-EPSGNMVVDIGGGTTEVAVISLGSIVTWESIRIAGDEMDEA 185 (344)
T ss_dssp HHHHHH-HHHHTTCSEEEEEEHHHHHHHHT-TCC--TT-SSSCEEEEEECSSCEEEEEEETTEEEEEEEESCSHHHHHHH
T ss_pred HHHHHH-HHHHcCCCeEeccCCHHHHHHhc-CCC--CC-CCceEEEEEeCCCeEEEEEEEcCCEEeeCCCCccChhHHHH
Confidence 344455 4567899865 455444444433 321 11 23568999999999999999999999999999999888875
Q ss_pred hc
Q 008124 182 FG 183 (577)
Q Consensus 182 f~ 183 (577)
+.
T Consensus 186 l~ 187 (344)
T 1jce_A 186 IV 187 (344)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 34
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=95.64 E-value=0.098 Score=54.22 Aligned_cols=109 Identities=16% Similarity=0.197 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHc-CCCcccEEEEeehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEE
Q 008124 70 ESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSV 148 (577)
Q Consensus 70 ~~L~~f~~~~~~~-~v~~~~i~~vATsA~R~A~N~~~fl~~i~~~tGl~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lvi 148 (577)
..|+..++.++.+ +.+..++ +++--+.=...+++.+.+ +-+..|+++..+--|=+|-....|.... ..+...+|+
T Consensus 118 ~~L~~l~~~a~~~~~~~~~~~-vitvP~~~~~~~r~~~~~-a~~~aGl~~~~li~Ep~Aaa~~~~~~~~--~~~~~~lVv 193 (383)
T 1dkg_D 118 EVLKKMKKTAEDYLGEPVTEA-VITVPAYFNDAQRQATKD-AGRIAGLEVKRIINEPTAAALAYGLDKG--TGNRTIAVY 193 (383)
T ss_dssp HHHHHHHHHHHHHHSSCCCEE-EECBCTTCCHHHHHHHHH-HHHHTTCEESCCCBHHHHHHHHHTCCC---CCEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCeE-EEEECCCCCHHHHHHHHH-HHHHcCCceEEEeccHHHHHHHHHhccC--CCCcEEEEE
Confidence 3455555555443 4332222 232222111122334444 4456799865444444443333332211 123468999
Q ss_pred EeCCCceEEEEeeCC------eEE---EEEEEehhHHHHHHhh
Q 008124 149 DIGGGSTEFVIGKRG------KVV---FCESVNLGHVSLSEKF 182 (577)
Q Consensus 149 DIGGGStEl~~~~~~------~~~---~~~SlplG~vrl~e~f 182 (577)
|+|||+|.+++++.+ .+. ...+.++|.-.+.+.+
T Consensus 194 D~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l 236 (383)
T 1dkg_D 194 DLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRL 236 (383)
T ss_dssp EECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHH
T ss_pred EcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHH
Confidence 999999999988743 221 2456799998888755
No 35
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=95.07 E-value=0.2 Score=50.71 Aligned_cols=96 Identities=16% Similarity=0.148 Sum_probs=59.0
Q ss_pred CCCcccEEEEeehhhh---h---cCChHHHHHHHHHHc-------C-----CcEEEeChHHHHHHHHhhhhccCCCCCCc
Q 008124 83 NISRDHTRAVATAAVR---A---AENKDEFVECVREKV-------G-----FEVDVLTGEQEAKFVYMGVLQFLPVFDRL 144 (577)
Q Consensus 83 ~v~~~~i~~vATsA~R---~---A~N~~~fl~~i~~~t-------G-----l~i~VIsg~eEA~l~~~gv~~~~~~~~~~ 144 (577)
+.+...+.+|.+--+. . .+|.+.+-++.+... | -+++++...-=|.+.+. .... .+..
T Consensus 90 ~~~~~~~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e~~aa~~~~~---~~~~-~~~~ 165 (320)
T 2zgy_A 90 GLPVSEVDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPESIPAGYEVL---QELD-ELDS 165 (320)
T ss_dssp SCCSCEEEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEESSHHHHHHHH---HHSC-TTCE
T ss_pred CCCCceEEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecCcHHHHHhhh---cccc-CCCC
Confidence 4433346656554433 2 245666666643211 1 14555665555555443 2222 2345
Q ss_pred eEEEEeCCCceEEEEeeCCeE-EE--EEEEehhHHHHHHhh
Q 008124 145 VLSVDIGGGSTEFVIGKRGKV-VF--CESVNLGHVSLSEKF 182 (577)
Q Consensus 145 ~lviDIGGGStEl~~~~~~~~-~~--~~SlplG~vrl~e~f 182 (577)
.+++|||||.|+++++++|.+ .. +.+.++|.-.+++..
T Consensus 166 ~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I 206 (320)
T 2zgy_A 166 LLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAV 206 (320)
T ss_dssp EEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHH
T ss_pred EEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHH
Confidence 899999999999999998865 33 578999998888753
No 36
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=94.80 E-value=0.038 Score=56.90 Aligned_cols=62 Identities=11% Similarity=0.053 Sum_probs=43.8
Q ss_pred cEEEeChHHHHHHHHhhhhccCCC--CCCceEEEEeCCCceEEEEee--CCeEEE--EEEEehhHHHHHHh
Q 008124 117 EVDVLTGEQEAKFVYMGVLQFLPV--FDRLVLSVDIGGGSTEFVIGK--RGKVVF--CESVNLGHVSLSEK 181 (577)
Q Consensus 117 ~i~VIsg~eEA~l~~~gv~~~~~~--~~~~~lviDIGGGStEl~~~~--~~~~~~--~~SlplG~vrl~e~ 181 (577)
++++++..-=|.+.|+ ...+. ++...+|+|||||+|++++++ +|.+.. +.++++|.-.+.+.
T Consensus 165 ~v~li~Ep~AAa~~~l---~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~ 232 (346)
T 2fsj_A 165 RLIMRPQGVGAALYLL---NQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISA 232 (346)
T ss_dssp EEEEEETTHHHHHHHH---HHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHH
T ss_pred EEEEEccHHHHHHHhh---ccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHH
Confidence 3667777766666662 22211 224469999999999999999 776666 58999998766653
No 37
>3gw7_A Uncharacterized protein YEDJ; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Escherichia coli k-12}
Probab=94.61 E-value=0.0088 Score=58.54 Aligned_cols=76 Identities=12% Similarity=0.169 Sum_probs=51.0
Q ss_pred hhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCC----CCchhhhHHHH---HcCCC
Q 008124 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSK----KGYHKQSCHII---MNGDH 433 (577)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~~I~~----~~h~~Hs~yiI---~ns~~ 433 (577)
.|..+|.++|..| ....+ .+..++.+||+|||||..-.+ ..|..-|+.++ +...
T Consensus 28 ~H~~rV~~~a~~i----a~~~~--------------~d~~~~~~AalLHDig~~~~~~~~~~~H~~~ga~~A~~~L~~~- 88 (239)
T 3gw7_A 28 CHFRRVWATAQKL----AADDD--------------VDMLVILTACYFHDIVSLAKNHPQRQRSSILAAEETRRLLREE- 88 (239)
T ss_dssp CHHHHHHHHHHHH----TTTSC--------------SCTTHHHHHHHHTTTTC--------CCSSHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHH----HHHcC--------------CCHHHHHHHHHHhhcccccccCCccccHHHHHHHHHHHHHHhc-
Confidence 7999999999875 33222 124689999999999986321 12334444333 3332
Q ss_pred CCCCCHHHHHHHHHHHHhccCC
Q 008124 434 LYGYSTDEIKLIALLTRFHRKK 455 (577)
Q Consensus 434 l~G~s~~E~~~iA~i~~yhrk~ 455 (577)
+.||+..+...|..++..|+.+
T Consensus 89 ~~g~~~e~i~~V~~~I~~Hs~~ 110 (239)
T 3gw7_A 89 FEQFPAEKIEAVCHAIAAHSFS 110 (239)
T ss_dssp TTSSCTTTTTSTTTGGGSSCTT
T ss_pred cCCcCHHHHHHHHHHHHHcCCC
Confidence 4799999999999999888754
No 38
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=94.55 E-value=0.71 Score=46.38 Aligned_cols=141 Identities=16% Similarity=0.148 Sum_probs=86.9
Q ss_pred ccccccCCCceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 008124 4 NTSYMQIPQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHN 83 (577)
Q Consensus 4 ~~~~~~~~~~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~ 83 (577)
|||| ..+..||||..++++.+++. +|. ++.+.+.++.. .. =.++.++...++++.+. ++.+
T Consensus 2 ~~m~-----~~~lgiDiggt~~~~~l~d~--~g~--il~~~~~~~~~----~~---~~~~~~~~l~~~i~~~~---~~~~ 62 (326)
T 2qm1_A 2 NAMD-----KKIIGIDLGGTTIKFAILTT--DGV--VQQKWSIETNI----LE---DGKHIVPSIIESIRHRI---DLYN 62 (326)
T ss_dssp CGGG-----CEEEEEEECSSEEEEEEEET--TCC--EEEEEEEECCC----TT---TTTTHHHHHHHHHHHHH---HHTT
T ss_pred CCcc-----cEEEEEEECCCEEEEEEECC--CCC--EEEEEEEcCCC----CC---CHHHHHHHHHHHHHHHH---HHcC
Confidence 6775 46789999999999999975 354 34444333211 01 12455666667776664 3455
Q ss_pred CCcccEEE--Eeehhhhh--------cCC----hH-HHHHHHHHHcCCcEEEeChHHHHHHHH--hhhhccCCCCCCceE
Q 008124 84 ISRDHTRA--VATAAVRA--------AEN----KD-EFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVL 146 (577)
Q Consensus 84 v~~~~i~~--vATsA~R~--------A~N----~~-~fl~~i~~~tGl~i~VIsg~eEA~l~~--~gv~~~~~~~~~~~l 146 (577)
++..++.+ ++....-+ +.| .- .+.+.+++.+|++|.+.+.-.=+-+.- .|... ..++.+
T Consensus 63 ~~~~~i~~igi~~pG~vd~~~g~v~~~~~l~w~~~~~l~~~l~~~~~~pv~v~ND~~aaa~~e~~~g~~~----~~~~~~ 138 (326)
T 2qm1_A 63 MKKEDFVGIGMGTPGSVDIEKGTVVGAYNLNWTTVQPVKEQIESALGIPFALDNDANVAALGERWKGAGE----NNPDVI 138 (326)
T ss_dssp CCGGGEEEEEEEESSEEETTTTEEECBGGGTBCSCBCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTT----TCSCEE
T ss_pred CCccceeEEEEecccceeCCCCEEEecCCCCccCCchHHHHHHHHhCCCEEEecHHHHHHHHHHHhCCCC----CCCcEE
Confidence 54445544 44544322 222 12 677888999999999987655544432 22221 224589
Q ss_pred EEEeCCCceEEEEeeCCeEEEE
Q 008124 147 SVDIGGGSTEFVIGKRGKVVFC 168 (577)
Q Consensus 147 viDIGGGStEl~~~~~~~~~~~ 168 (577)
++-+|.| +-..+..+|++...
T Consensus 139 ~l~~GtG-iG~giv~~G~l~~G 159 (326)
T 2qm1_A 139 FITLGTG-VGGGIVAAGKLLHG 159 (326)
T ss_dssp EEEESSS-EEEEEEETTEECCC
T ss_pred EEEECCc-eEEEEEECCEEeec
Confidence 9999999 66777778877643
No 39
>3hc1_A Uncharacterized HDOD domain protein; HDOD domain protein with unknown function, STRU genomics, joint center for structural genomics; 1.90A {Geobacter sulfurreducens}
Probab=94.03 E-value=0.077 Score=53.61 Aligned_cols=95 Identities=18% Similarity=0.087 Sum_probs=63.4
Q ss_pred hhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCC-----------------------
Q 008124 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSK----------------------- 417 (577)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~~I~~----------------------- 417 (577)
.|+.+|+.+|..|-.. .++ + +...+..|++|||||+..=+
T Consensus 121 ~hs~~va~~a~~la~~----~~~-----------~--~~~~~~~agllHDIGkl~l~~~~p~~~~~il~~~~~~~~~l~~ 183 (305)
T 3hc1_A 121 AHSLGVARIAKLIAER----TGF-----------L--NPVNVYVAGLLHDVGEVFINFFRGKEFSQVVTLVDEEKITFGQ 183 (305)
T ss_dssp HHHHHHHHHHHHHHHH----TTC-----------S--CHHHHHHHHHTTTHHHHHHHHHSHHHHHHHHHHHHHHCCCHHH
T ss_pred HHHHHHHHHHHHHHHH----cCC-----------C--CHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 7999999999875433 332 1 23568899999999986521
Q ss_pred -------CCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCCchhhcCCChHHHHHHHHHHHHHHHHHHhcc
Q 008124 418 -------KGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQ 490 (577)
Q Consensus 418 -------~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~~yhrk~~~~~~~~~~~~l~~~~~~~v~kL~~iLRlA~~Ld~ 490 (577)
..|..-+++++.+.+ ++ ..++.+++||....... . ....++.|+.+|+.++.
T Consensus 184 ~E~~~~~~~H~~iG~~ll~~w~-lp-------~~i~~~I~~HHe~~~~~---------~----~~~~~a~Iv~lAD~~~~ 242 (305)
T 3hc1_A 184 AEERLFGTSHCEVGFALAKRWS-LN-------EFICDTILYHHDIEAVP---------Y----KQAAIVAMVAFADEYCT 242 (305)
T ss_dssp HHHHHHSSCHHHHHHHHHHHTT-CC-------HHHHHHHHHTTCGGGCS---------S----SCCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHcC-CC-------HHHHHHHHHhCChhhcc---------c----cccHHHHHHHHHHHHHH
Confidence 367788888887775 54 34566667776422110 0 12247889999999987
Q ss_pred ccC
Q 008124 491 NDC 493 (577)
Q Consensus 491 s~~ 493 (577)
-..
T Consensus 243 ~~~ 245 (305)
T 3hc1_A 243 LRR 245 (305)
T ss_dssp HTT
T ss_pred HhC
Confidence 654
No 40
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=94.01 E-value=0.047 Score=55.88 Aligned_cols=42 Identities=21% Similarity=0.185 Sum_probs=36.3
Q ss_pred CCceEEEEeCCCceEEEEeeCCeEE--EEEEEehhHHHHHHhhc
Q 008124 142 DRLVLSVDIGGGSTEFVIGKRGKVV--FCESVNLGHVSLSEKFG 183 (577)
Q Consensus 142 ~~~~lviDIGGGStEl~~~~~~~~~--~~~SlplG~vrl~e~f~ 183 (577)
+...+++|||||+|+++++.++.+. .+.|+|+|.-.+++...
T Consensus 171 ~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~ 214 (329)
T 4apw_A 171 NKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVG 214 (329)
T ss_dssp TCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHH
T ss_pred cCCEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHH
Confidence 4567999999999999999999998 45799999999988543
No 41
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=93.85 E-value=0.22 Score=53.89 Aligned_cols=151 Identities=13% Similarity=0.084 Sum_probs=88.0
Q ss_pred EEEEEecccceEEEEEEEeCCCCEE-----EEEeee----eeeeeccC-C------------CcCCCCC-HHHHHHHHHH
Q 008124 15 FASIDMGTSSFKLLIIRAYPNGKFL-----TIDTLK----QPVILGRD-L------------SSSCSIS-TQSQARSVES 71 (577)
Q Consensus 15 ~AvIDIGSNSirL~I~~~~~~~~~~-----~l~~~k----~~vrLg~~-~------------~~~g~Ls-~e~i~r~~~~ 71 (577)
.-|||+||.++|.-.+. ++.++ ++.+.+ ...-+|.. . .++|.|. -+.+++.++-
T Consensus 25 ~iVID~GS~~~kaG~ag---~~~P~~v~PSvVg~~~~~~~~~~~vG~e~~~~~r~~l~l~~Pi~~GvI~dwd~~E~iw~~ 101 (498)
T 3qb0_A 25 AVVIDPGSYTTNIGYSG---SDFPQSILPSVYGKYTADEGNKKIFSEQSIGIPRKDYELKPIIENGLVIDWDTAQEQWQW 101 (498)
T ss_dssp CEEEECCSSEEEEEETT---CSSCSEEEESEEEEESSCSSCCEECCTTGGGSCCTTEEEEESEETTEESCHHHHHHHHHH
T ss_pred eEEEECCCcEEEEEECC---CCCeeeecCceeEEeccCCCccEEEecHHHhcCcCceEEeccCcCCEEccHHHHHHHHHH
Confidence 36899999999876542 22211 222211 11233432 1 1345554 3566544443
Q ss_pred HHHHHHHHHHcCCCcc-cEEEEeehhhhh-cCChHHHHHHHHHHcCCc-EEEeChHHHHHHHHhhhhccCCCCCCceEEE
Q 008124 72 LLMFRDIIQSHNISRD-HTRAVATAAVRA-AENKDEFVECVREKVGFE-VDVLTGEQEAKFVYMGVLQFLPVFDRLVLSV 148 (577)
Q Consensus 72 L~~f~~~~~~~~v~~~-~i~~vATsA~R~-A~N~~~fl~~i~~~tGl~-i~VIsg~eEA~l~~~gv~~~~~~~~~~~lvi 148 (577)
+ |. +..++.+. ++.++-|++.-. ..|++.+.+.+.+..|++ +-++. ++-++.+|.- . ..++|+
T Consensus 102 ~--f~---~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~---~~vlalya~G--~----~tglVV 167 (498)
T 3qb0_A 102 A--LQ---NELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAP---TSTCVSFAAG--R----PNCLVV 167 (498)
T ss_dssp H--HH---HTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEE---HHHHHHHHHT--C----SSEEEE
T ss_pred H--HH---hhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecc---hHHHHHHHcC--C----CeEEEE
Confidence 2 22 23455432 213455654432 336667777777778887 34443 4445544432 2 237999
Q ss_pred EeCCCceEEEEeeCCeEE--EEEEEehhHHHHHHhh
Q 008124 149 DIGGGSTEFVIGKRGKVV--FCESVNLGHVSLSEKF 182 (577)
Q Consensus 149 DIGGGStEl~~~~~~~~~--~~~SlplG~vrl~e~f 182 (577)
|+|+|.|+++.+.+|.++ ...++++|.-.+++.+
T Consensus 168 DiG~g~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L 203 (498)
T 3qb0_A 168 DIGHDTCSVSPIVDGMTLSKSTRRNFIAGKFINHLI 203 (498)
T ss_dssp EECSSCEEEEEEETTEECGGGCEEESCSHHHHHHHH
T ss_pred EcCCCcEEEEEEeCCEEccccceeccccHHHHHHHH
Confidence 999999999999999877 3578999998888743
No 42
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=93.70 E-value=0.66 Score=45.82 Aligned_cols=115 Identities=16% Similarity=0.242 Sum_probs=63.3
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEE-EE
Q 008124 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR-AV 92 (577)
Q Consensus 14 ~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~-~v 92 (577)
.+..||+||.+++.++.+ ++| +++.....+.. + . ..+++.++ +++..+ .+++..++. +.
T Consensus 4 ~~lGiD~Gst~~k~~l~d--~~g--~i~~~~~~~~~---~-----~-~~~~~~~~---l~~l~~----~~~~~~~i~~i~ 63 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILK--DGK--EIVAKSLVAVG---T-----G-TSGPARSI---SEVLEN----AHMKKEDMAFTL 63 (270)
T ss_dssp EEEEEEECSSEEEEEEEE--TTT--EEEEEEEEECC---S-----S-CCHHHHHH---HHHHHH----HTCCGGGCSEEE
T ss_pred EEEEEEeccceEEEEEEe--CCC--CEEEEEEecCC---C-----C-HHHHHHHH---HHHHHH----cCCChhHEEEEE
Confidence 578999999999999985 345 34554433331 1 1 12444433 333322 133323443 34
Q ss_pred eehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEE
Q 008124 93 ATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVV 166 (577)
Q Consensus 93 ATsA~R~A~N~~~fl~~i~~~tGl~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~ 166 (577)
+|..-|..-.. .+ ..+++ |-+|. +.|+....+ +. ..++||||+.+.++.+++|.+.
T Consensus 64 ~TG~g~~~~~~----------~~--~~~v~-Ei~ah--~~ga~~~~~--~~-~~vidiGGqd~k~i~~~~g~v~ 119 (270)
T 1hux_A 64 ATGYGRNSLEG----------IA--DKQMS-ELSCH--AMGASFIWP--NV-HTVIDIGGQDVKVIHVENGTMT 119 (270)
T ss_dssp EESTTTTTTTT----------TC--SEEEC-HHHHH--HHHHHHHCT--TC-CEEEEEETTEEEEEEEETTEEE
T ss_pred EeCccccchhh----------cC--CCCcc-cHHHH--HHHHHHhCC--CC-CEEEEECCCceEEEEEeCCcee
Confidence 55544432211 12 23333 33333 345544444 22 3789999999999999999865
No 43
>2q14_A Phosphohydrolase; BT4208, HD domain, structural genomics, JO center for structural genomics, JCSG; HET: MSE ADP; 2.20A {Bacteroides thetaiotaomicron vpi-5482}
Probab=93.33 E-value=0.11 Score=54.58 Aligned_cols=59 Identities=20% Similarity=0.202 Sum_probs=43.4
Q ss_pred hhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHHhhcccc---------c-CCCCchhhhHHHHH
Q 008124 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHF---------T-SKKGYHKQSCHIIM 429 (577)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~~---------I-~~~~h~~Hs~yiI~ 429 (577)
.|+.-|+.+|..+.+.+..... .+++.+..++++||+|||||.. + ....|...|..+|.
T Consensus 58 ~HSLgV~~la~~l~~~l~~~~~----------~~~~~d~~~~~~AaLlHDiGh~PfsH~~E~~~~~~~~He~~s~~ii~ 126 (410)
T 2q14_A 58 QHSLGAFYLMSEAITQLTSKGN----------FIFDSEAEAVQAAILLHDIGHGPFSHVLEDTIVQGVSHEEISLMLME 126 (410)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTC----------CCCHHHHHHHHHHHHHTTTTCCTTHHHHHTTTSTTCCHHHHHHHHHH
T ss_pred ehHHHHHHHHHHHHHHHHhcCC----------CCCHHHHHHHHHHHHHhccCCCccccccHHhhcCCCCHHHHHHHHHH
Confidence 7999999999999888764310 2455667899999999999972 1 13566666666665
No 44
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=92.58 E-value=0.1 Score=53.97 Aligned_cols=64 Identities=14% Similarity=0.101 Sum_probs=44.6
Q ss_pred cEEEeChHHHHHHHHhhhhccCC----CCCCceEEEEeCCCceEEEEeeCCeEE--EEEEEehhHHHHHHhh
Q 008124 117 EVDVLTGEQEAKFVYMGVLQFLP----VFDRLVLSVDIGGGSTEFVIGKRGKVV--FCESVNLGHVSLSEKF 182 (577)
Q Consensus 117 ~i~VIsg~eEA~l~~~gv~~~~~----~~~~~~lviDIGGGStEl~~~~~~~~~--~~~SlplG~vrl~e~f 182 (577)
+|.|+...-=|.+.+. . ...+ ..+...+++|||||+|++++..++.+. .+.|+++|.-.+.+..
T Consensus 156 ~V~v~pE~~~a~~~~~-~-~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i 225 (355)
T 3js6_A 156 GVKIVAQPMGTLLDLN-M-ENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRI 225 (355)
T ss_dssp EEEEEEHHHHHHHHTT-E-ETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHH
T ss_pred EEEEEeCcHHHHHHHH-H-ccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHH
Confidence 5666665554444432 0 1111 024568999999999999999998886 5779999999888754
No 45
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=92.50 E-value=1.8 Score=42.45 Aligned_cols=113 Identities=16% Similarity=0.200 Sum_probs=61.8
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEE-
Q 008124 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV- 92 (577)
Q Consensus 14 ~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v- 92 (577)
.+..||+||.++..+|.+ +++ +++.+...+ +|.-. +. +.++|++.. ++.+.....+..+
T Consensus 2 ~~lGID~GsT~tk~av~d--~~~--~il~~~~~~---------~g~~~-e~---a~~vl~~~~---~~a~~~~~~~~~~a 61 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILK--NGE--DIVASETIS---------SGTGT-TG---PSRVLEKLY---GKTGLAREDIKKVV 61 (276)
T ss_dssp EEEEEEECSSCEEEEEEE--TTT--EEEEEEEES---------CCTTS-SH---HHHHHHHHH---HHHCCCGGGEEEEE
T ss_pred eEEEEEcCccEEEEEEEE--CCC--eEEEEEEec---------CCCCH-HH---HHHHHHHHH---HHCCCcchhccccc
Confidence 468899999999988875 344 334322111 12222 22 223444433 3345544444444
Q ss_pred eehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEee-CCeE
Q 008124 93 ATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGK-RGKV 165 (577)
Q Consensus 93 ATsA~R~A~N~~~fl~~i~~~tGl~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~-~~~~ 165 (577)
.|.+-+.| .+.++..|+--+ |. .+|+....+ ....++|+|||.+.+++.. +|.+
T Consensus 62 ~t~~~~~a-------------~~~~~~~Vne~~-ah--a~a~~~~~~---~~~~vl~lgG~~~~~~~~~~~g~~ 116 (276)
T 4ehu_A 62 VTGYGRMN-------------YSDADKQISELS-CH--ARGVNFIIP---ETRTIIDIGGQDAKVLKLDNNGRL 116 (276)
T ss_dssp EESTTGGG-------------CCSCSEECCHHH-HH--HHHHHHHST---TCCEEEEECSSCEEEEEECTTSCE
T ss_pred cCchHHHH-------------hhCCCcccchHH-HH--HHHHHHhCC---CCCeEEEEcCCCceEEEEEecCce
Confidence 46666654 344566776433 33 234333333 2248999999999988774 4443
No 46
>3sk9_A Putative uncharacterized protein TTHB187; crispr, CAS, HD domain, nuclease, hydrolase; 1.80A {Thermus thermophilus HB8} PDB: 3skd_A
Probab=92.39 E-value=0.15 Score=50.47 Aligned_cols=88 Identities=14% Similarity=-0.000 Sum_probs=58.8
Q ss_pred hhHHHHHHHHHHHHHHH--------hhcccccchhhhhhcccCcchHHHHHHHHHHhhccccc----CC-----------
Q 008124 361 KAGAQCASIAKDIFEGL--------RKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT----SK----------- 417 (577)
Q Consensus 361 ~ha~~V~~~a~~LFd~l--------~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~~I----~~----------- 417 (577)
.|..-|+..|..|++.. ....|++ ++..+.++.+++.|||||++. .+
T Consensus 28 ~HllDvAava~~L~~~~~~~~r~~la~~~g~~----------~~~~~~~~~~~~~lHDiGK~~~~fq~~~~~~~~~l~~~ 97 (265)
T 3sk9_A 28 AHMLDTAAVALAVLRMEPPRTRALYAEDWGLP----------EEGALAWAAALVGLHDLGKASPVFQAGWEEGKERVQRA 97 (265)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHHHHHHHTSC----------HHHHHHHHHHHHTTTTGGGCSGGGCC------------
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHhCCC----------HHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHhhc
Confidence 68888888888887763 3333321 112367888999999999971 11
Q ss_pred ----------CCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCC
Q 008124 418 ----------KGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPR 458 (577)
Q Consensus 418 ----------~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~~yhrk~~~~ 458 (577)
..|..-|++++.+--.=.|++......++.++..|.+..|.
T Consensus 98 g~~~~~~~~~~~Ha~aGa~ll~~~L~~~g~~~~~~~~ia~~I~gHHG~~p~ 148 (265)
T 3sk9_A 98 GLPFGELLDWVAHGVFTELFLRRLLKEKGLPERAANDLAAALGAHHGFPAN 148 (265)
T ss_dssp ---------CCCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTSTTTTSCCC
T ss_pred cCCccccCCCCChHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCCCC
Confidence 23555566666432000388888888999988888887775
No 47
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=92.37 E-value=2.1 Score=42.58 Aligned_cols=130 Identities=13% Similarity=0.109 Sum_probs=78.8
Q ss_pred CceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccE--
Q 008124 12 QTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHT-- 89 (577)
Q Consensus 12 ~~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i-- 89 (577)
++.+..||+|..++|+.+++. +|. ++.+.+.+. . .. . .=.++.++...++++++. ++.+++..++
T Consensus 10 ~~~~lGiDiGgT~i~~~l~d~--~G~--il~~~~~~~-~--~~-~--~~~~~~~~~l~~~i~~~l---~~~~~~~~~i~~ 76 (305)
T 1zc6_A 10 IRYLIGVDGGGTGTRIRLHAS--DGT--PLAMAEGGA-S--AL-S--QGIAKSWQAVLSTLEAAF---QQAGLPAAPASA 76 (305)
T ss_dssp CCEEEEEEECSSCEEEEEEET--TCC--EEEEEEESC-C--CG-G--GCHHHHHHHHHHHHHHHH---HHTTCCCCCGGG
T ss_pred CCEEEEEEcCccceEEEEEcC--CCC--EEEEEeCCC-C--Cc-c--cCHHHHHHHHHHHHHHHH---HhcCCChhhhcc
Confidence 347889999999999999974 454 343332210 0 00 0 113456677777776664 3445544444
Q ss_pred --EEEeehhhhhcCChHHHHHHHHHHc--CCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeE
Q 008124 90 --RAVATAAVRAAENKDEFVECVREKV--GFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKV 165 (577)
Q Consensus 90 --~~vATsA~R~A~N~~~fl~~i~~~t--Gl~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~ 165 (577)
.+++....-+..+... ++..+ +.++.|.+.-.=|.+ |.. . ..+.+++=+|.|+.-..+..+|++
T Consensus 77 ~~igig~pG~v~~~~~~~----l~~~~~~~~pv~v~NDa~aaa~---ge~---~--~~~~v~v~~GTGigg~~i~~~G~~ 144 (305)
T 1zc6_A 77 CAIGLGLSGVHNRQWAGE----FESQAPGFARLSLATDGYTTLL---GAH---G--GQPGIIVALGTGSIGEALYPDGSH 144 (305)
T ss_dssp EEEEEEESCCCTTSHHHH----HHHTCCCCSEEEEECHHHHHHH---HHT---T--TSSEEEEEESSSEEEEEECTTSCE
T ss_pred ceEEEEecCCCchHHHHH----HHHhCCCCceEEEECCHHHHHH---hhc---C--CCCeEEEEecCCeEEEEEeCCCcE
Confidence 5677877655554432 56667 799999886655544 321 1 235788889999865555535654
Q ss_pred E
Q 008124 166 V 166 (577)
Q Consensus 166 ~ 166 (577)
.
T Consensus 145 ~ 145 (305)
T 1zc6_A 145 R 145 (305)
T ss_dssp E
T ss_pred E
Confidence 3
No 48
>3u1n_A SAM domain and HD domain-containing protein 1; deoxynucleotide triphosphohydrolase, hydrolase; 3.10A {Homo sapiens}
Probab=92.12 E-value=0.27 Score=53.00 Aligned_cols=46 Identities=17% Similarity=0.267 Sum_probs=34.7
Q ss_pred hhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHHhhcccc
Q 008124 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHF 414 (577)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~~ 414 (577)
.|+.-|+.+|..+.+.|.....- . .+++++..++++||+|||||..
T Consensus 68 ~HSLgV~~la~~i~~~l~~~~~~----~----~~~~~d~~~v~~AaLlHDiGH~ 113 (528)
T 3u1n_A 68 EHSLGVGYLAGCLVHALGEKQPE----L----QISERDVLCVQIAGLCHDLGHG 113 (528)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCGG----G----CCCHHHHHHHHHHHHHTTTTCB
T ss_pred HHHHHHHHHHHHHHHHHHhhCcc----c----CCCHHHHHHHHHHHHHhccCCC
Confidence 79999999999999888643210 0 2345566899999999999954
No 49
>2hek_A Hypothetical protein; predominantly alpha helical protein with GDP binding site AN site being FAR from EACH other, structural genomics, PSI; HET: GDP; 2.00A {Aquifex aeolicus} SCOP: a.211.1.1
Probab=91.90 E-value=0.3 Score=50.76 Aligned_cols=76 Identities=24% Similarity=0.356 Sum_probs=53.8
Q ss_pred hhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHHhhccccc----------CCCCchhhhHHHHHc
Q 008124 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT----------SKKGYHKQSCHIIMN 430 (577)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~~I----------~~~~h~~Hs~yiI~n 430 (577)
.|+..|+.+|..+.+.+. + +++ .++.+||+|||||... ...+|..-|..++.+
T Consensus 53 ~Hsl~V~~~a~~ia~~~~----~-----------~~~--~~~~~AaLLHDiG~~pfsh~~e~~~~~g~~He~~g~~i~~~ 115 (371)
T 2hek_A 53 EHSLGVYHITERICESLK----V-----------KEK--ELVKLAGLLHDLGHPPFSHTTEVLLPRERSHEDFTERVIKE 115 (371)
T ss_dssp HHHHHHHHHHHHHHHHHT----C-----------TTH--HHHHHHHHTTTTTCCSSSSCHHHHSTTSSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcC----C-----------CHH--HHHHHHHHHHhcCccccccchHHHhccCCCHHHHHHHHHhc
Confidence 799999999998866542 1 222 6899999999999976 346777778887653
Q ss_pred CC---CCCC-CCHHHHHHHHHHHHhcc
Q 008124 431 GD---HLYG-YSTDEIKLIALLTRFHR 453 (577)
Q Consensus 431 s~---~l~G-~s~~E~~~iA~i~~yhr 453 (577)
.+ -|.. +++++...++.++..++
T Consensus 116 ~~i~~iL~~~~~~~~i~~I~~~I~~~~ 142 (371)
T 2hek_A 116 TEIYEILKQDYSHEDIERLVRITLGKP 142 (371)
T ss_dssp SHHHHHHHTTSCHHHHHHHHHHHHTCC
T ss_pred chHHHHHHHhCCHHHHHHHHHHHhcCC
Confidence 10 0111 78888887888777543
No 50
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=91.86 E-value=0.95 Score=50.11 Aligned_cols=109 Identities=16% Similarity=0.238 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHc-CCCcccEEEEeehhhhhcCChHHHHHHHHHHcCCcE-EEeChHHHHHHHHhhhhccCCCCCCceE
Q 008124 69 VESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQFLPVFDRLVL 146 (577)
Q Consensus 69 ~~~L~~f~~~~~~~-~v~~~~i~~vATsA~R~A~N~~~fl~~i~~~tGl~i-~VIsg~eEA~l~~~gv~~~~~~~~~~~l 146 (577)
...|+.+++.++.+ |.+..++ ++.--|.=... ....+..+-+..|+++ ++|+...-|.+.| |.... ..+...+
T Consensus 117 a~iL~~lk~~ae~~lg~~v~~~-VITVPa~f~~~-qr~a~~~Aa~~AGl~v~~li~EP~AAAlay-gl~~~--~~~~~vl 191 (605)
T 4b9q_A 117 AEVLKKMKKTAEDYLGEPVTEA-VITVPAYFNDA-QRQATKDAGRIAGLEVKRIINEPTAAALAY-GLDKG--TGNRTIA 191 (605)
T ss_dssp HHHHHHHHHHHHHHHTSCCCEE-EEEECTTCCHH-HHHHHHHHHHHTTCEEEEEEEHHHHHHHHH-HTTSC--CSSEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCeE-EEEECCCCCHH-HHHHHHHHHHHcCCceEEEeCcHHHHHHHh-hhhcc--CCCCEEE
Confidence 44567777777666 5543322 22221111111 1223444455679986 5666666665554 44322 1235689
Q ss_pred EEEeCCCceEEEEeeCCe---------EEEEEEEehhHHHHHHhh
Q 008124 147 SVDIGGGSTEFVIGKRGK---------VVFCESVNLGHVSLSEKF 182 (577)
Q Consensus 147 viDIGGGStEl~~~~~~~---------~~~~~SlplG~vrl~e~f 182 (577)
|+|+|||++.+++++-+. +......++|...+.+.+
T Consensus 192 V~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l 236 (605)
T 4b9q_A 192 VYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRL 236 (605)
T ss_dssp EEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHH
T ss_pred EEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHH
Confidence 999999999999877433 112334678887776644
No 51
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=91.15 E-value=0.99 Score=49.92 Aligned_cols=158 Identities=16% Similarity=0.228 Sum_probs=86.2
Q ss_pred EEEEecccceEEEEEEEeCCCC-EEEEEeeeeeeeeccCCCcC------CCCCHHHHHH-HHHHHHH-HHHHHHHcCCCc
Q 008124 16 ASIDMGTSSFKLLIIRAYPNGK-FLTIDTLKQPVILGRDLSSS------CSISTQSQAR-SVESLLM-FRDIIQSHNISR 86 (577)
Q Consensus 16 AvIDIGSNSirL~I~~~~~~~~-~~~l~~~k~~vrLg~~~~~~------g~Ls~e~i~r-~~~~L~~-f~~~~~~~~v~~ 86 (577)
.+|||||.+|....+++. +|. +......+-.++.|+++-+. +.=..+.+++ .+++|.+ +.+++++.|+++
T Consensus 209 lAvDiGTTtv~~~LvdL~-tG~~l~~~~~~NpQ~~~G~DVisRI~~a~~~~~g~~~L~~~v~~~in~li~~l~~~~~i~~ 287 (631)
T 3zyy_X 209 LAIDIGTTTVVVQLVDLV-SGKVLGTKGNYNKQAAFGDDVISRIIYVDENPDGAEKLRKAVLSTINELIFQLCKEHGVEK 287 (631)
T ss_dssp EEEEECSSEEEEEEEETT-TCCEEEEEEEECGGGGTCSSHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHHTCCG
T ss_pred EEEEecccceeEEEEECC-CCCEEEeecccCCCCCcchHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 689999999999999986 564 34444556667888886431 1111122333 3344544 455667778887
Q ss_pred ccEEE---Eeehhh------------hhcCChHHHHHHH---HHHcCCc------EEEe---ChHHHHHHHHhhhhccCC
Q 008124 87 DHTRA---VATAAV------------RAAENKDEFVECV---REKVGFE------VDVL---TGEQEAKFVYMGVLQFLP 139 (577)
Q Consensus 87 ~~i~~---vATsA~------------R~A~N~~~fl~~i---~~~tGl~------i~VI---sg~eEA~l~~~gv~~~~~ 139 (577)
++|.. +|-.+| +.|+=...|.+.. ..++|++ |.++ +|.-=|-...--+...+.
T Consensus 288 ~~I~~~~v~GNt~M~hLllgi~p~~L~~~Py~p~~~~~~~~~a~~lgl~~~p~~~v~~lP~i~~~VGaDi~Ag~la~~~~ 367 (631)
T 3zyy_X 288 KEIMAAVVAGNTTMTHLFLEIDPRYIRLEPYTPAALFIPPVPATEAKIEMNPKGFVYIMPNVASYVGGDITSGVLYTGLA 367 (631)
T ss_dssp GGEEEEEEEECHHHHHHHHTCCCGGGSSTTTCCSCSCCCCEEHHHHTCSSCTTSEEEECCCCBTTBCHHHHHHHHHHTTT
T ss_pred HHeeEEEEEccHHHHHHHcCCChHHhccCCcccccCCCceecHHHcCCCcCCCCEEEEcCcccccccHHHHHHHHhcCcc
Confidence 66543 332222 2222111110000 1234653 3333 332222221111112233
Q ss_pred CCCCceEEEEeCCCceEEEEeeCCeEEEEEEEehhHH
Q 008124 140 VFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHV 176 (577)
Q Consensus 140 ~~~~~~lviDIGGGStEl~~~~~~~~~~~~SlplG~v 176 (577)
..++..|++|||. +.|++++.++++ .+-|-+-|+.
T Consensus 368 ~~~~~~L~iDiGT-NgEivL~~~~~l-~~~S~aAGPA 402 (631)
T 3zyy_X 368 NSDEITLFIDIGT-NGEMVLGNKDWL-VTCACSAGPA 402 (631)
T ss_dssp SCSSCEEEEECSS-EEEEEEECSSCE-EEEEEECCGG
T ss_pred cCCCCEEEEEcCC-CeEEEEeeCCEE-EEEeccCchh
Confidence 3345689999987 689999987776 4668999984
No 52
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=91.14 E-value=1.8 Score=48.56 Aligned_cols=111 Identities=17% Similarity=0.255 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHc-CCCcccEEEEee-hhhhhcCChHHHHHHHHHHcCCcE-EEeChHHHHHHHHhhhhc-cCC---C
Q 008124 68 SVESLLMFRDIIQSH-NISRDHTRAVAT-AAVRAAENKDEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQ-FLP---V 140 (577)
Q Consensus 68 ~~~~L~~f~~~~~~~-~v~~~~i~~vAT-sA~R~A~N~~~fl~~i~~~tGl~i-~VIsg~eEA~l~~~gv~~-~~~---~ 140 (577)
....|+..++.++.+ |-+..+ +|-| -|.=....++.+.+. -+..|+++ ++|+...=|-+.| |... .++ .
T Consensus 119 ~a~~L~~lk~~ae~~lg~~v~~--~VITVPa~f~~~qR~a~~~A-a~~AGl~~~~li~EP~AAAlay-gl~~~~~~~~~~ 194 (675)
T 3d2f_A 119 AAMFIDKVKDTVKQDTKANITD--VCIAVPPWYTEEQRYNIADA-ARIAGLNPVRIVNDVTAAGVSY-GIFKTDLPEGEE 194 (675)
T ss_dssp HHHHHHHHHHHHHHHHCSCCCE--EEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHH-HHHCSCCCCSSS
T ss_pred HHHHHHHHHHHHHHHhCCCcce--EEEEECCCCCHHHHHHHHHH-HHHcCCceEEEEcchHHHHHHH-hhhccccccccC
Confidence 344566666666554 533222 2333 111111113334444 45679996 5666555555555 5433 222 1
Q ss_pred CCCceEEEEeCCCceEEEEee--CCeE-EEE--EEEehhHHHHHHhh
Q 008124 141 FDRLVLSVDIGGGSTEFVIGK--RGKV-VFC--ESVNLGHVSLSEKF 182 (577)
Q Consensus 141 ~~~~~lviDIGGGStEl~~~~--~~~~-~~~--~SlplG~vrl~e~f 182 (577)
.+...+|+|+|||+|.+++++ +|.+ +.+ ...++|.-.+.+.+
T Consensus 195 ~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l 241 (675)
T 3d2f_A 195 KPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAI 241 (675)
T ss_dssp CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred CCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHH
Confidence 235589999999999999986 6655 222 34789987776643
No 53
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=90.79 E-value=0.13 Score=53.74 Aligned_cols=92 Identities=16% Similarity=0.174 Sum_probs=32.6
Q ss_pred CCCcccEEEEeeh-hhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEee
Q 008124 83 NISRDHTRAVATA-AVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGK 161 (577)
Q Consensus 83 ~v~~~~i~~vATs-A~R~A~N~~~fl~~i~~~tGl~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~ 161 (577)
++++.+..++-|. +.-...|++.+.+.+.+..|++. +.=-.|+-++.+|.- ...++|+|||+|.|.++.+.
T Consensus 99 ~~~~~~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~--~~~~~~~~~a~~a~g------~~~~lVVDiG~g~T~v~pv~ 170 (394)
T 1k8k_B 99 NIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSG--VYVAIQAVLTLYAQG------LLTGVVVDSGDGVTHICPVY 170 (394)
T ss_dssp ---------------------------------------------------------------CCEEEECSSCEEEECEE
T ss_pred CcCCCCCcEEEEECCCCCHHHHHHHHHHhhhccCCCe--EEEEhhHHHHHHhCC------CceEEEEEcCCCceEeeeeE
Confidence 4433333445453 33344567777777766667653 222344444444321 23479999999999999999
Q ss_pred CCeEEE--EEEEehhHHHHHHhh
Q 008124 162 RGKVVF--CESVNLGHVSLSEKF 182 (577)
Q Consensus 162 ~~~~~~--~~SlplG~vrl~e~f 182 (577)
+|.+.. ..++|+|.-.+++.+
T Consensus 171 ~G~~~~~~~~~~~~GG~~lt~~l 193 (394)
T 1k8k_B 171 EGFSLPHLTRRLDIAGRDITRYL 193 (394)
T ss_dssp TTEECSTTCEEESCCHHHHHHHH
T ss_pred CCEEcccceEEeeccHHHHHHHH
Confidence 998876 578999987777643
No 54
>3irh_A HD domain protein; phosphohydrolase, dntpase, structural genomics, P protein structure initiative, midwest center for structural genomics; HET: DGT DTP; 2.40A {Enterococcus faecalis} PDB: 2o6i_A*
Probab=90.73 E-value=0.3 Score=52.11 Aligned_cols=67 Identities=18% Similarity=0.191 Sum_probs=45.0
Q ss_pred hhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHHhhccccc--------CCCCchhhhHHHHHc
Q 008124 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT--------SKKGYHKQSCHIIMN 430 (577)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~~I--------~~~~h~~Hs~yiI~n 430 (577)
.|+--|+.+|..+.+.+...+.-..... ..+++.++.++++||+|||||..- -..+|-..|..+|.+
T Consensus 89 ~HSLgV~~la~~i~~~l~~~~~~~~~~~---~~~~~~~~~~v~~AaLlHDIGH~PFsH~~E~~~~~~HE~~s~~ii~~ 163 (480)
T 3irh_A 89 SHSLGVYEITRRICEIFQRNYSVERLGE---NGWNDDERLITLCAALLHDVGHGPYSHTFEHIFDTNHEAITVQIITS 163 (480)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSBHHHHGG---GSBCGGGHHHHHHHHHHTTTTCCTTHHHHHHHHCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHhhCccccccc---cCCCHHHHHHHHHHHHHhccCCCCccchhhhccCCCHHHHHHHHHHc
Confidence 7999999999999998864311000000 024566778999999999999651 124566677777765
No 55
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=90.45 E-value=3.2 Score=41.92 Aligned_cols=140 Identities=13% Similarity=0.143 Sum_probs=83.7
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcc---cEE
Q 008124 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRD---HTR 90 (577)
Q Consensus 14 ~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~---~i~ 90 (577)
.+..||+|..++++.+++. +|. ++.+.+.+ . ......=.++.++...++++++.+ +.+++.. .-.
T Consensus 7 ~~lgiDiGgt~~~~~l~d~--~g~--i~~~~~~~----~-~~~~~~~~~~~~~~i~~~i~~~~~---~~~~~~~~~i~gi 74 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSE--DGK--ILAEADGL----S-TNHWLIGTDKCVERINEMVNRAKR---KAGVDPLVPLRSL 74 (347)
T ss_dssp EEEEEEECTTCEEEEEEET--TSC--EEEEEEEC----C-CCHHHHCHHHHHHHHHHHHHHHHH---HHTCCTTCCBSEE
T ss_pred EEEEEEcCccceEEEEEeC--CCC--EEEEEeCC----C-CCcccCCHHHHHHHHHHHHHHHHH---hcCCCcccceeEE
Confidence 6789999999999999975 354 34333221 0 000000024456667777776644 3344322 235
Q ss_pred EEeehhhhhcCChHHHHHHHHHHcC---CcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEE
Q 008124 91 AVATAAVRAAENKDEFVECVREKVG---FEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVF 167 (577)
Q Consensus 91 ~vATsA~R~A~N~~~fl~~i~~~tG---l~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~ 167 (577)
++|....-+..+...+.+.+++.+| .+|.|.+.-.=|.+.+ .. ++++++=+|.|+--..+..+|....
T Consensus 75 gi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~------~~---~~~v~v~~GTGig~~~v~~~G~~c~ 145 (347)
T 2ch5_A 75 GLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA------TP---DGGVVLISGTGSNCRLINPDGSESG 145 (347)
T ss_dssp EEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH------CS---SCEEEEEESSSEEEEEECTTSCEEE
T ss_pred EEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh------CC---CCcEEEEEcCCceeEEEcCCCCEEe
Confidence 6677776554445567788888997 8999988665555441 11 3478888899987766554565433
Q ss_pred EEEEehhHH
Q 008124 168 CESVNLGHV 176 (577)
Q Consensus 168 ~~SlplG~v 176 (577)
. =..||+
T Consensus 146 c--G~~G~l 152 (347)
T 2ch5_A 146 C--GGWGHM 152 (347)
T ss_dssp E--ECCCTT
T ss_pred c--CCcCcc
Confidence 2 344554
No 56
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=90.18 E-value=7.8 Score=38.54 Aligned_cols=128 Identities=13% Similarity=0.100 Sum_probs=73.2
Q ss_pred CCceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEE
Q 008124 11 PQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR 90 (577)
Q Consensus 11 ~~~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~ 90 (577)
.+.....|||||.++++++.+ ++.+ ++. + +. .+.++++++.+ +.-++ .+
T Consensus 18 ~~~~~iGIDiGsTt~K~V~~~---~~~i--~~~-~---------~~-----~~~~~~~l~~l-------~~~~~----~~ 66 (287)
T 2ews_A 18 GSHMKVGIDAGGTLIKIVQEQ---DNQR--TFK-T---------EL-----TKNIDQVVEWL-------NQQQI----EK 66 (287)
T ss_dssp ---CEEEEEECSSEEEEEEEC---SSCE--EEE-E---------EE-----GGGHHHHHHHH-------HTSCC----SE
T ss_pred CCCeEEEEEEChhhEEEEEEc---CCEE--EEE-E---------ec-----hHHHHHHHHHh-------cccCc----eE
Confidence 445679999999999999972 3433 221 1 11 11244443333 21122 25
Q ss_pred EEeehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCC---CCCceEEEEeCCCceEEEEeeCCeEEE
Q 008124 91 AVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPV---FDRLVLSVDIGGGSTEFVIGKRGKVVF 167 (577)
Q Consensus 91 ~vATsA~R~A~N~~~fl~~i~~~tGl~i~VIsg~eEA~l~~~gv~~~~~~---~~~~~lviDIGGGStEl~~~~~~~~~~ 167 (577)
+++|--=|.. | . +..|++...++ |-.-...|+..-.+. .-.+.+++|||||-. ++.++++....
T Consensus 67 i~~TG~G~~~-----~-~---~~l~~~~~~v~---Ei~~~~~Ga~~l~~~~~~~~~~~~vIdIGg~ds-ii~v~~~~f~r 133 (287)
T 2ews_A 67 LCLTGGNAGV-----I-A---ENINIPAQIFV---EFDAASQGLGILLKEQGHDLADYIFANVGTGTS-LHYFDGQSQRR 133 (287)
T ss_dssp EEEESTTHHH-----H-H---TTSSSCCEECC---HHHHHHHHHHHHHHHTTCCCSCEEEEEESSSEE-EEEECSSCEEE
T ss_pred EEEEChhHHh-----H-h---HhhCCCcceee---hhHHHHHHHHHhcccCCCCcCCeEEEEeCCCeE-EEEEcCCceEE
Confidence 5777543321 1 1 14677766644 444444454432221 112479999999988 99998777776
Q ss_pred EEEEehhHHHHHHhh
Q 008124 168 CESVNLGHVSLSEKF 182 (577)
Q Consensus 168 ~~SlplG~vrl~e~f 182 (577)
.---..|.-++-+..
T Consensus 134 ~~g~aaGgGtFl~l~ 148 (287)
T 2ews_A 134 VGGIGTGGGMIQGLG 148 (287)
T ss_dssp EEEESCSHHHHHHHH
T ss_pred cCccccchhhHHHHH
Confidence 667788988887654
No 57
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=89.50 E-value=2.8 Score=45.94 Aligned_cols=110 Identities=18% Similarity=0.175 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHH-HH-HHcCCCccc---EEEEee-hhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccC
Q 008124 65 QARSVESLLMFRD-II-QSHNISRDH---TRAVAT-AAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFL 138 (577)
Q Consensus 65 i~r~~~~L~~f~~-~~-~~~~v~~~~---i~~vAT-sA~R~A~N~~~fl~~i~~~tGl~i~VIsg~eEA~l~~~gv~~~~ 138 (577)
+....+.+..+-+ .+ +..++++.+ ..++=| ..+-.-.|++.+++-+.+..|++-=-+. .++-++.+|.-
T Consensus 170 ~~~~wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~--~~~vla~ya~G--- 244 (593)
T 4fo0_A 170 LTAVLADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVH--QESVCATYGSG--- 244 (593)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEE--EHHHHHHHHHT---
T ss_pred hhcCHHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEee--chHHHHHHHCC---
Confidence 3444455544322 22 456776543 334444 4455567888999999999888843332 35566665532
Q ss_pred CCCCCceEEEEeCCCceEEEEeeCCeEE--EEEEEehhHHHHHHhh
Q 008124 139 PVFDRLVLSVDIGGGSTEFVIGKRGKVV--FCESVNLGHVSLSEKF 182 (577)
Q Consensus 139 ~~~~~~~lviDIGGGStEl~~~~~~~~~--~~~SlplG~vrl~e~f 182 (577)
...++|||+|-+.|-++-+.+|.++ ....+++|.--+++.+
T Consensus 245 ---~~tglVVDiG~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L 287 (593)
T 4fo0_A 245 ---LSSTCIVDVGDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCF 287 (593)
T ss_dssp ---CSEEEEEEECSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHH
T ss_pred ---CCceEEEEeCCCceeeeeeECCEEehhheEEecccHHHHHHHH
Confidence 2348999999999999999999776 3578999998888755
No 58
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=88.66 E-value=1.8 Score=47.88 Aligned_cols=107 Identities=19% Similarity=0.246 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHc-CCCcccEEEEee-hhhhhcCChHHHHHHHHHHcCCcEE-EeChHHHHHHHHhhhhccCCCCCCce
Q 008124 69 VESLLMFRDIIQSH-NISRDHTRAVAT-AAVRAAENKDEFVECVREKVGFEVD-VLTGEQEAKFVYMGVLQFLPVFDRLV 145 (577)
Q Consensus 69 ~~~L~~f~~~~~~~-~v~~~~i~~vAT-sA~R~A~N~~~fl~~i~~~tGl~i~-VIsg~eEA~l~~~gv~~~~~~~~~~~ 145 (577)
...|+..++.++.| |.+..+ +|-| -|.=.-..++.+.+. -+..|+++. +|+...=|-+.| |.-.. ..+...
T Consensus 117 a~~L~~l~~~ae~~l~~~v~~--~VitVPa~f~d~qr~a~~~A-~~~AGl~v~~li~EP~AAAlay-~l~~~--~~~~~v 190 (605)
T 2kho_A 117 AEVLKKMKKTAEDYLGEPVTE--AVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAY-GLDKG--TGNRTI 190 (605)
T ss_dssp HHHHHHHHHHHHHHHCSCCCE--EEEEECTTCCHHHHHHHHHH-HHTTTCEEEEEEEHHHHHHHHT-TTTSS--SSEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCcE--EEEEECCCCCHHHHHHHHHH-HHHcCCceEEEecCHHHHHHHh-hhccc--CCCCEE
Confidence 34566666666655 543222 2323 211111112334443 456799965 555555444544 43221 123568
Q ss_pred EEEEeCCCceEEEEeeC------CeEE---EEEEEehhHHHHHHh
Q 008124 146 LSVDIGGGSTEFVIGKR------GKVV---FCESVNLGHVSLSEK 181 (577)
Q Consensus 146 lviDIGGGStEl~~~~~------~~~~---~~~SlplG~vrl~e~ 181 (577)
+|+|+|||+|.+++++- +.+. .....++|.-.+.+.
T Consensus 191 lV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~ 235 (605)
T 2kho_A 191 AVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSR 235 (605)
T ss_dssp EEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHH
T ss_pred EEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHH
Confidence 99999999999998773 4332 234467887655543
No 59
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=87.80 E-value=9.5 Score=39.17 Aligned_cols=134 Identities=14% Similarity=0.071 Sum_probs=81.1
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHH--cCCCcccEE
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQS--HNISRDHTR 90 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~--~~v~~~~i~ 90 (577)
..+..||||.+++++.+++.. |. ++.+.+.++.. . .=.++.++...++++.+.+.... ..+ .-.
T Consensus 87 ~~~lGIDiGgt~i~~~l~d~~--G~--vl~~~~~~~~~--~-----~~~~~~~~~l~~~i~~~~~~~~~~~~~i---~gi 152 (380)
T 2hoe_A 87 AYVLGIEVTRDEIAACLIDAS--MN--ILAHEAHPLPS--Q-----SDREETLNVMYRIIDRAKDMMEKLGSKL---SAL 152 (380)
T ss_dssp CEEEEEEECSSEEEEEEEETT--CC--EEEEEEEECCS--S-----CCHHHHHHHHHHHHHHHHHHHHHTTCCC---CEE
T ss_pred CeEEEEEECCCEEEEEEECCC--CC--EEEEEEEccCC--C-----CCHHHHHHHHHHHHHHHHHhcCCCcCcE---EEE
Confidence 467899999999999999763 54 34433333211 0 01355677777777777654321 122 224
Q ss_pred EEeehhhhh--------cCC----hHHHHHHHHHHcCCcEEEeChHHHHHHHHh--hhhccCCCCCCceEEEEeCCCceE
Q 008124 91 AVATAAVRA--------AEN----KDEFVECVREKVGFEVDVLTGEQEAKFVYM--GVLQFLPVFDRLVLSVDIGGGSTE 156 (577)
Q Consensus 91 ~vATsA~R~--------A~N----~~~fl~~i~~~tGl~i~VIsg~eEA~l~~~--gv~~~~~~~~~~~lviDIGGGStE 156 (577)
+||....-+ +.| .-.+.+.+++++|++|.|.+.-.=|-+.-. |.. . ++.+++-+|.| +-
T Consensus 153 gi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~~g~~-----~-~~~v~l~~GtG-iG 225 (380)
T 2hoe_A 153 TVAAPGPIDTERGIIIDPRNFPLSQIPLANLLKEKYGIEVWVENDADMGAVGEKWYTKR-----D-DSFAWILTGKG-IG 225 (380)
T ss_dssp EEEESSCEETTTTEECCCSSCTTBTSCHHHHHHHHHCSEEEEEEHHHHHHHHHHHHTTC-----C-SCEEEEEESSS-CE
T ss_pred EEEeeccEECCCCEEeccCCCCCcCCChHHHHHHHhCCCEEEechHHHHHHHHHHhCCC-----C-CcEEEEEeCCc-eE
Confidence 456554422 222 135678888899999999887655544422 221 1 45899999988 55
Q ss_pred EEEeeCCeEEE
Q 008124 157 FVIGKRGKVVF 167 (577)
Q Consensus 157 l~~~~~~~~~~ 167 (577)
..+.-+|++..
T Consensus 226 ~giv~~G~l~~ 236 (380)
T 2hoe_A 226 AGIIIDGELYR 236 (380)
T ss_dssp EEEEETTEECC
T ss_pred EEEEECCEEec
Confidence 66666777653
No 60
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=87.59 E-value=2 Score=45.40 Aligned_cols=100 Identities=15% Similarity=0.080 Sum_probs=67.7
Q ss_pred HcCCCcccEEEEeehhhh-hcCChHHHHHHHHHHcCCc-EEEeChHHHHHHHHhhhhccCCC--CCCceEEEEeCCCceE
Q 008124 81 SHNISRDHTRAVATAAVR-AAENKDEFVECVREKVGFE-VDVLTGEQEAKFVYMGVLQFLPV--FDRLVLSVDIGGGSTE 156 (577)
Q Consensus 81 ~~~v~~~~i~~vATsA~R-~A~N~~~fl~~i~~~tGl~-i~VIsg~eEA~l~~~gv~~~~~~--~~~~~lviDIGGGStE 156 (577)
..++.+.+-.++-|++.- -..|++...+.+.+..|.+ +-++ .++-++.+|.-..... ....++|+|+|+|.|.
T Consensus 116 ~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~---~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~ 192 (427)
T 3dwl_A 116 YLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIA---VQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTH 192 (427)
T ss_dssp TSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEE---EHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEE
T ss_pred hhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeec---chHHHHHHhcCCcccccCCCceEEEEECCCCceE
Confidence 356665455667776543 3356667777777778887 4444 4566666654321111 1235899999999999
Q ss_pred EEEeeCCeEEE--EEEEehhHHHHHHhhc
Q 008124 157 FVIGKRGKVVF--CESVNLGHVSLSEKFG 183 (577)
Q Consensus 157 l~~~~~~~~~~--~~SlplG~vrl~e~f~ 183 (577)
++.+.+|.++. ..++++|.-.+++.+.
T Consensus 193 v~PV~~G~~l~~~~~rl~~gG~~lt~~L~ 221 (427)
T 3dwl_A 193 IIPVAEGYVIGSSIKTMPLAGRDVTYFVQ 221 (427)
T ss_dssp EEEEETTEECGGGCEEESCCHHHHHHHHH
T ss_pred EEEEECCEEehhhheeccccHHHHHHHHH
Confidence 99999998876 6789999988887553
No 61
>1vqr_A Hypothetical protein CJ0248; HD-domain/pdease-like fold, structural genomics, joint cente structural genomics, JCSG; 2.25A {Campylobacter jejuni subsp} SCOP: a.211.1.3
Probab=87.42 E-value=0.92 Score=45.30 Aligned_cols=38 Identities=16% Similarity=0.163 Sum_probs=26.8
Q ss_pred hhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHHhhccccc
Q 008124 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT 415 (577)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~~I 415 (577)
.|+..|+.+|..+-..+ + ..+...+..|++|||||+.+
T Consensus 127 ~hs~~va~~a~~la~~~----~-------------~~~~e~a~~aGLLHDIGkl~ 164 (297)
T 1vqr_A 127 KTCNEEATFIANWLNDE----D-------------KKLSHLLVPCAMLLRLGIVI 164 (297)
T ss_dssp HHHHHHHHHHHHHHTTT----C-------------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc----c-------------CCCHHHHHHHHHHHHccHHH
Confidence 68888888888753221 1 12335688999999999876
No 62
>2dqb_A Deoxyguanosinetriphosphate triphosphohydrolase, P; dntpase, DNTP, single-stranded DNA, DNA dGTPase, HD superfamily, structural genomics; 2.20A {Thermus thermophilus}
Probab=87.04 E-value=1.4 Score=45.70 Aligned_cols=52 Identities=23% Similarity=0.309 Sum_probs=37.8
Q ss_pred hhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHHhhcccc---------c-------CCCCchhhh
Q 008124 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHF---------T-------SKKGYHKQS 424 (577)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~~---------I-------~~~~h~~Hs 424 (577)
.|+.-|+.+|..|...|. + + ..++++||+|||||.. + ....|..+|
T Consensus 78 ~HSl~Va~iar~ia~~l~----l-----------~---~~l~~~a~LlHDiGh~PFgH~~E~~l~~~~~~~ggf~Hn~~s 139 (376)
T 2dqb_A 78 THTLEVAQVSRSIARALG----L-----------N---EDLTEAIALSHDLGHPPFGHTGEHVLNALMQDHGGFEHNAQA 139 (376)
T ss_dssp HHHHHHHHHHHHHHHHTT----C-----------C---HHHHHHHHHHTTTTCCSSTTHHHHHHHHHTTTTTCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHcC----C-----------C---HHHHHHHHHHHhcCCCccccchHHHHHHHhhccCCCcHHHHH
Confidence 799999999998765542 2 2 2689999999999975 1 123567777
Q ss_pred HHHHHc
Q 008124 425 CHIIMN 430 (577)
Q Consensus 425 ~yiI~n 430 (577)
+.++..
T Consensus 140 ~ril~~ 145 (376)
T 2dqb_A 140 LRILTH 145 (376)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 777765
No 63
>3i7a_A Putative metal-dependent phosphohydrolase; YP_926882.1, STRU genomics, joint center for structural genomics, JCSG; 2.06A {Shewanella amazonensis SB2B}
Probab=86.74 E-value=1.7 Score=42.99 Aligned_cols=98 Identities=12% Similarity=0.103 Sum_probs=59.4
Q ss_pred hhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccC---------------------CCC
Q 008124 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTS---------------------KKG 419 (577)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~~I~---------------------~~~ 419 (577)
.|+..|+.+|..|-..+....++ +..+...+..|++|||||...= ...
T Consensus 120 ~hs~~vA~~a~~la~~~~~~~~~-----------~~~~~~~~~laGLLHdiGkl~l~~~~~~~~~~l~~~~~~~~~~~~~ 188 (281)
T 3i7a_A 120 RTSIDVTAAACSLLQIYNKKHPG-----------SGLNYDTLTLAGLVHNIGALPVLTEAEAHPEMFTTIEHLRSLVRKM 188 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTT-----------CCCCHHHHHHHHHHTTTTHHHHHHHHHHCGGGCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcccc-----------CCCCHHHHHHHHHHHHCCHHHHHHhHHhhHHHhcChHHHHHHHhCc
Confidence 69999999999876555332222 1123356889999999998531 124
Q ss_pred chhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCCchhhcCCChHHHHHHHHHHHHHHHHHHhccc
Q 008124 420 YHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQN 491 (577)
Q Consensus 420 h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~~yhrk~~~~~~~~~~~~l~~~~~~~v~kL~~iLRlA~~Ld~s 491 (577)
|..-+++++.+-+ |.. .+..+++||........ ...++.++++|+.+...
T Consensus 189 H~~iGa~ll~~w~----lp~----~i~~ai~~Hh~~~~~~~--------------~~~~~~iV~lAd~~~~~ 238 (281)
T 3i7a_A 189 QGPIGRAVLKSWD----FAP----EVMEVVERWADLPYLGD--------------HVSYLDFIRAAAFYTGE 238 (281)
T ss_dssp HHHHHHHHHHHTT----CCH----HHHHHHHHTTCTTCCCS--------------SCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHCC----CCH----HHHHHHHHHcChhhcCC--------------cCCHHHHHHHHHHHcCC
Confidence 6677778776654 332 45556667754322100 01255688888887643
No 64
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=85.72 E-value=14 Score=38.66 Aligned_cols=135 Identities=14% Similarity=0.077 Sum_probs=82.8
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEE-
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRA- 91 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~- 91 (577)
..+..||||..++++.+++.. |. ++.+.+.++. ..+ .++.++...++++.|.+ +.+++..++.+
T Consensus 108 ~~~lGIDiGgt~i~~~l~d~~--G~--il~~~~~~~~------~~~--~~~~~~~l~~~i~~~~~---~~~~~~~~i~gi 172 (429)
T 1z05_A 108 WQFLSMRLGRGYLTIALHELG--GE--VLIDTKIDIH------EID--QDDVLARLLFEIEEFFQ---TYAAQLDRVTSI 172 (429)
T ss_dssp EEEEEEEEETTEEEEEEEETT--SC--EEEEEEEECC------CCB--HHHHHHHHHHHHHHHHH---HTTTTCCEEEEE
T ss_pred CEEEEEEECCCEEEEEEECCC--CC--EEEEEEEcCC------CCC--HHHHHHHHHHHHHHHHH---hcCCCcCceEEE
Confidence 467899999999999999753 54 3444333321 111 35566777777776643 45554344543
Q ss_pred -Eeehhhhh--------cCCh----HHHHHHHHHHcCCcEEEeChHHHHHHHH--hhhhccCCCCCCceEEEEeCCCceE
Q 008124 92 -VATAAVRA--------AENK----DEFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVLSVDIGGGSTE 156 (577)
Q Consensus 92 -vATsA~R~--------A~N~----~~fl~~i~~~tGl~i~VIsg~eEA~l~~--~gv~~~~~~~~~~~lviDIGGGStE 156 (577)
||....-+ +.|- -.+.+.+++++|++|.|.+.-.=|-+.- .|... ..++.+++-+|.| +-
T Consensus 173 gi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~L~~~~~~pV~v~NDa~aaalaE~~~g~~~----~~~~~v~l~~GtG-iG 247 (429)
T 1z05_A 173 AITLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKATGLPVFVANDTRAWALAEKLFGHSQ----DVDNSVLISIHHG-LG 247 (429)
T ss_dssp EEEESSEEETTTTEEEECSSSBCSSBCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTT----TCSSEEEEEESSS-EE
T ss_pred EEeccCcEeCCCCeEeecCCCCCCCCCHHHHHHHHhCCCEEEechhHHHHHHHHHhCCCC----CCCcEEEEEECCc-EE
Confidence 34443322 2321 3567888899999999988766555442 23221 2245899999988 55
Q ss_pred EEEeeCCeEEE
Q 008124 157 FVIGKRGKVVF 167 (577)
Q Consensus 157 l~~~~~~~~~~ 167 (577)
..++-+|++..
T Consensus 248 ~giv~~G~l~~ 258 (429)
T 1z05_A 248 AGIVLDGRVLQ 258 (429)
T ss_dssp EEEEETTEECC
T ss_pred EEEEECCEEee
Confidence 66667777653
No 65
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=84.56 E-value=6.9 Score=39.15 Aligned_cols=131 Identities=18% Similarity=0.211 Sum_probs=79.9
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEE
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (577)
+.+..||||..++++.+++. +|. ++.+.+.++ .. + .++.++...+.++++.+ .+.+ .-.++
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~--~G~--i~~~~~~~~------~~-~--~~~~~~~i~~~i~~~~~---~~~i---~gigi 62 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDE--EGR--ILSTFKVAT------PP-T--AEGIVDAICAAVAGASE---GHDV---EAVGI 62 (321)
T ss_dssp CEEEEEEECSSEEEEEEECT--TCC--BCCCEEEEC------CS-S--HHHHHHHHHHHHHHHHT---TCCE---EEEEE
T ss_pred cEEEEEEECCCEEEEEEECC--CCC--EEEEEEeeC------CC-C--HHHHHHHHHHHHHHHHh---hcCc---eEEEE
Confidence 35789999999999999864 343 344444333 11 1 24445555555555532 2222 22345
Q ss_pred eehhhhh--------cCC----hHHHHHHHHHHcCCcEEEeChHHHHHHHHh--hhhccCCCCCCceEEEEeCCCceEEE
Q 008124 93 ATAAVRA--------AEN----KDEFVECVREKVGFEVDVLTGEQEAKFVYM--GVLQFLPVFDRLVLSVDIGGGSTEFV 158 (577)
Q Consensus 93 ATsA~R~--------A~N----~~~fl~~i~~~tGl~i~VIsg~eEA~l~~~--gv~~~~~~~~~~~lviDIGGGStEl~ 158 (577)
+....-+ +.| .-.+.+.+++++|++|.+.+.-.=+-+.-. |... ..++.+++-+|.| +-..
T Consensus 63 ~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~~~----~~~~~~~l~~GtG-iG~g 137 (321)
T 3vgl_A 63 GAAGYVDDKRATVLFAPNIDWRHEPLKDKVEQRVGLPVVVENDANAAAWGEYRFGAGQ----GHDDVICITLGTG-LGGG 137 (321)
T ss_dssp EESSEECTTSSCEEECSSSCCEEECHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTT----TCSSEEEEEESSS-EEEE
T ss_pred eccccEeCCCCEEEeCCCCCCcCCCHHHHHhhhhCCCEEEEehhhhHHHHHHHhCCCC----CCCCEEEEEeCcc-eEEE
Confidence 5544322 222 235678889999999999987665555422 2221 2345899999998 7777
Q ss_pred EeeCCeEEE
Q 008124 159 IGKRGKVVF 167 (577)
Q Consensus 159 ~~~~~~~~~ 167 (577)
+.-+|++..
T Consensus 138 ii~~G~l~~ 146 (321)
T 3vgl_A 138 IIIGNKLRR 146 (321)
T ss_dssp EEETTEECC
T ss_pred EEECCEEec
Confidence 777888764
No 66
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=84.53 E-value=12 Score=38.79 Aligned_cols=134 Identities=12% Similarity=0.071 Sum_probs=80.9
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEE-
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRA- 91 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~- 91 (577)
..+..||||.+++++.+++. +|. ++.+.+.+. . . . =.++.++...++++.|.+ +.+++..++..
T Consensus 85 ~~~lgiDiG~t~i~~~l~d~--~G~--il~~~~~~~--~-~--~---~~~~~~~~l~~~i~~~~~---~~~~~~~~i~gi 149 (406)
T 1z6r_A 85 WHYLSLRISRGEIFLALRDL--SSK--LVVEESQEL--A-L--K---DDLPLLDRIISHIDQFFI---RHQKKLERLTSI 149 (406)
T ss_dssp CEEEEEEEETTEEEEEEEET--TCC--EEEEEEEEC--C-S--S---CSSCHHHHHHHHHHHHHH---HTGGGCCCEEEE
T ss_pred cEEEEEEEcCCEEEEEEEcC--CCC--EEEEEEecC--C-C--C---CHHHHHHHHHHHHHHHHH---hcCCCcCceeEE
Confidence 46789999999999999975 354 344443332 1 1 1 124456777777777654 33433234443
Q ss_pred -Eeehhh--------hhcCCh-----HHHHHHHHHHcCCcEEEeChHHHHHHHH--hhhhccCCCCCCceEEEEeCCCce
Q 008124 92 -VATAAV--------RAAENK-----DEFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVLSVDIGGGST 155 (577)
Q Consensus 92 -vATsA~--------R~A~N~-----~~fl~~i~~~tGl~i~VIsg~eEA~l~~--~gv~~~~~~~~~~~lviDIGGGSt 155 (577)
||.... ..+.|- -.+.+.+++.+|++|.|.+.-.=|-+.- .|... ..++.+++-+|.| +
T Consensus 150 gi~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~pv~v~NDa~aaalaE~~~g~~~----~~~~~v~l~~GtG-i 224 (406)
T 1z6r_A 150 AITLPGIIDTENGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMAEALFGASR----GARDVIQVVIDHN-V 224 (406)
T ss_dssp EEEESSEEETTTTEEEECTTCTTCSSBCHHHHHHHHHSSCEEEEEHHHHHHHHHHHHSTTT----TCSSEEEEEESSS-E
T ss_pred EEEeecCEeCCCCEEecCCCCCCccCCCHHHHHHHHHCCCEEEechhHHHHHHHHHhcCCC----CCCcEEEEEECCc-E
Confidence 344333 223332 3567888899999999987655444432 22211 2345899999988 5
Q ss_pred EEEEeeCCeEE
Q 008124 156 EFVIGKRGKVV 166 (577)
Q Consensus 156 El~~~~~~~~~ 166 (577)
-..+.-+|++.
T Consensus 225 G~giv~~G~l~ 235 (406)
T 1z6r_A 225 GAGVITDGHLL 235 (406)
T ss_dssp EEEEEETTEET
T ss_pred EEEEEECCEEe
Confidence 66667777765
No 67
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=82.04 E-value=10 Score=37.90 Aligned_cols=134 Identities=13% Similarity=0.121 Sum_probs=83.2
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEE
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (577)
..+..||||.+++++.+++. +|. ++.+.+.++.-..+ .++.++...+.++++.+ ....+ .-.++
T Consensus 19 ~~~lgidiggt~i~~~l~d~--~g~--il~~~~~~~~~~~~-------~~~~~~~i~~~i~~~~~--~~~~i---~gigi 82 (321)
T 3r8e_A 19 GMILGIDVGGTSVKFGLVTP--EGE--IQNATRFMTADWVN-------GIGFVESMKLEIGNFLK--QYPIV---KGVGI 82 (321)
T ss_dssp CCEEEEECCSSEEEEEEECT--TCC--EEEEEEEEHHHHHT-------TTCHHHHHHHHHHHHHH--HCTTC---CEEEE
T ss_pred cEEEEEEECCCEEEEEEEcC--CCc--EEEEEEEeCCCCCC-------HHHHHHHHHHHHHHHHh--ccCCe---eEEEE
Confidence 45789999999999999964 354 45444444321111 23456666666666654 22233 23455
Q ss_pred eehhhhh--------cCC-----hHHHHHHHHHHc-CCcEEEeChHHHHHHHH--hhhhccCCCCCCceEEEEeCCCceE
Q 008124 93 ATAAVRA--------AEN-----KDEFVECVREKV-GFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVLSVDIGGGSTE 156 (577)
Q Consensus 93 ATsA~R~--------A~N-----~~~fl~~i~~~t-Gl~i~VIsg~eEA~l~~--~gv~~~~~~~~~~~lviDIGGGStE 156 (577)
|....-+ +.| .-.+.+.+++++ |++|.|.+.-.=+-+.- +|... ..++.+++-+|.| +-
T Consensus 83 ~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~~pV~v~NDa~aaalaE~~~g~~~----~~~~~v~l~~GtG-iG 157 (321)
T 3r8e_A 83 GWPGLVSLDRTKVILLPNIPSVVNVPIVEILRSEFPHIHFKIENDAKCAALGEYYFGENK----RMQTFILLALGTG-VG 157 (321)
T ss_dssp EESSEECTTSCCEEEBTTBCCCCSCCHHHHHHHHCTTSEEEEEEHHHHHHHHHHHHSTTT----TCSSEEEEEESSS-EE
T ss_pred EecccEECCCCEEEeCCCCccccCCCHHHHHHHHcCCCCEEEEchHHHHHHHHHHhCCCC----CCCcEEEEEECCc-eE
Confidence 6544422 222 235678889999 99999988766555442 23222 2345899999998 77
Q ss_pred EEEeeCCeEEE
Q 008124 157 FVIGKRGKVVF 167 (577)
Q Consensus 157 l~~~~~~~~~~ 167 (577)
..+..+|++..
T Consensus 158 ~gii~~G~l~~ 168 (321)
T 3r8e_A 158 SGVMMNGKLFI 168 (321)
T ss_dssp EEEEETTEECC
T ss_pred EEEEECCEEec
Confidence 77777888764
No 68
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=81.80 E-value=5.3 Score=43.15 Aligned_cols=77 Identities=16% Similarity=0.189 Sum_probs=44.3
Q ss_pred CCceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCHHH-HHHHHHHHHHHHHHHHHcCCCcc
Q 008124 11 PQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQS-QARSVESLLMFRDIIQSHNISRD 87 (577)
Q Consensus 11 ~~~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~--Ls~e~-i~r~~~~L~~f~~~~~~~~v~~~ 87 (577)
..+.+.+||+|+.|+|..+++. +|. ++...+.++.. .....|. -.++. .+.++++++ +++++.+++..
T Consensus 24 M~~~~lgIDiGtts~k~~l~d~--~G~--il~~~~~~~~~--~~p~~g~~e~dp~~~~~~i~~~i~---~~~~~~~~~~~ 94 (520)
T 4e1j_A 24 MGGYILAIDQGTTSTRAIVFDG--NQK--IAGVGQKEFKQ--HFPKSGWVEHDPEEIWQTVVSTVK---EAIEKSGITAN 94 (520)
T ss_dssp CSCEEEEEEECSSEEEEEEECT--TSC--EEEEEEEECCC--BCSSTTCCEECHHHHHHHHHHHHH---HHHHTTTCCGG
T ss_pred hhCeEEEEEeCCcceEEEEECC--CCC--EEEEEEEeccc--ccCCCCcEEECHHHHHHHHHHHHH---HHHHhcCCCcc
Confidence 3467899999999999999964 454 34444443321 1112222 23333 344444444 44556677666
Q ss_pred cEEEEeehh
Q 008124 88 HTRAVATAA 96 (577)
Q Consensus 88 ~i~~vATsA 96 (577)
+|.+|+-++
T Consensus 95 ~I~~Igis~ 103 (520)
T 4e1j_A 95 DIAAIGITN 103 (520)
T ss_dssp GEEEEEEEE
T ss_pred cEEEEEEeC
Confidence 788776443
No 69
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=81.47 E-value=5.7 Score=43.91 Aligned_cols=112 Identities=15% Similarity=0.216 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHHH-H--HcCCCcc---cEEEEeehhh-hhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhc
Q 008124 64 SQARSVESLLMFRDII-Q--SHNISRD---HTRAVATAAV-RAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQ 136 (577)
Q Consensus 64 ~i~r~~~~L~~f~~~~-~--~~~v~~~---~i~~vATsA~-R~A~N~~~fl~~i~~~tGl~i~VIsg~eEA~l~~~gv~~ 136 (577)
++++..+.++.+-+-+ . ..++.+. +..++-|.+. --..|++.+.+.+.+..|++-=-+ .+++-++.+|.-
T Consensus 191 s~q~~WD~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl--~~qavlAlyasG- 267 (655)
T 4am6_A 191 SLAELISDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAI--IQESLATCYGAG- 267 (655)
T ss_dssp SHHHHHHHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEE--EEHHHHHHHHSC-
T ss_pred cccccHHHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeee--ccHHHHHHHhCC-
Confidence 3444455555543332 2 3567653 3455555443 334567778888888888874433 236666666532
Q ss_pred cCCCCCCceEEEEeCCCceEEEEeeCCeEEE--EEEEehhHHHHHHhh
Q 008124 137 FLPVFDRLVLSVDIGGGSTEFVIGKRGKVVF--CESVNLGHVSLSEKF 182 (577)
Q Consensus 137 ~~~~~~~~~lviDIGGGStEl~~~~~~~~~~--~~SlplG~vrl~e~f 182 (577)
+ ...++|+|+|+|.|.++.+.+|.++. ...+++|.-.+++.+
T Consensus 268 -l---~ttGLVVDiG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL 311 (655)
T 4am6_A 268 -I---STSTCVVNIGAAETRIACVDEGTVLEHSAITLDYGGDDITRLF 311 (655)
T ss_dssp -C---SSCEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHH
T ss_pred -C---CCceEEEcCCCceEEEEEEeCCEEEhhheeeecchHHHHHHHH
Confidence 1 13489999999999999999887763 357999998888754
No 70
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=80.01 E-value=6.3 Score=40.69 Aligned_cols=140 Identities=16% Similarity=0.117 Sum_probs=76.7
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeecc--CCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEE
Q 008124 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGR--DLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRA 91 (577)
Q Consensus 14 ~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~--~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~ 91 (577)
.+.+||||+.++++.+++. + +++.+.+.++.-.. + .+ .+ -+.++.+++.+..+. ++++++..++.+
T Consensus 3 ~vlgidiGgt~ik~al~d~---~--~il~~~~~~~~~~~~~~-~~--~~-~~~~~~~~~~i~~~l---~~~~~~~~~i~g 70 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFED---E--RMVKMQNFSHSPDELGR-FQ--KI-LDQLEFREKIARQFV---EETGYSLSSFSA 70 (381)
T ss_dssp EEEEEEECSSEEEEEEEET---T--EEEEEEEEECCHHHHHT-CS--SG-GGGHHHHHHHHHHHH---HTTTCCGGGCSE
T ss_pred eEEEEECCccceeEEEEec---c--hheeeeecccCcccccc-hh--hH-HHHHHHHHHHHHHHH---HHcCCCccCceE
Confidence 4789999999999999962 2 56655554432110 1 10 11 123333355555543 344443222222
Q ss_pred -Eee--------hhh-----------------hhcCCh-HHHHHHHHHHcCCcEEEeChHH------HHHHHHh------
Q 008124 92 -VAT--------AAV-----------------RAAENK-DEFVECVREKVGFEVDVLTGEQ------EAKFVYM------ 132 (577)
Q Consensus 92 -vAT--------sA~-----------------R~A~N~-~~fl~~i~~~tGl~i~VIsg~e------EA~l~~~------ 132 (577)
++. ..+ ..+.|- -.+.+.+++++|+++-|.+.-. +|+...+
T Consensus 71 Ii~~pG~vd~~~G~~~~i~~~~~~~l~~~~~~~~~~nl~~~l~~~l~~~~~~Pv~v~NDan~~~~~~~a~aaalp~~~r~ 150 (381)
T 1saz_A 71 FVSRGGLLDPIPGGVYLVDGLMIKTLKSGKNGEHASNLGAIIAHRFSSETGVPAYVVDPVVVDEMEDVARVSGHPNYQRK 150 (381)
T ss_dssp EEEECCSCSCBCSSEEECCHHHHHHHHHTTTCCCTTHHHHHHHHHHHHHHCCCEEEESCTTBCCCCGGGTBCSSTTCBCC
T ss_pred EEecCCCCCCCCCceEecCHHHHHHHHhcccccChhhhhHHHHHHHHHhcCCCEEEeCCCccccCcHHHHHcCCcchhhh
Confidence 342 222 234442 3455667889999998877664 3333222
Q ss_pred -----------------hhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEE
Q 008124 133 -----------------GVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFC 168 (577)
Q Consensus 133 -----------------gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~ 168 (577)
|... +..+.+.+++-+|.|. -.....+|++...
T Consensus 151 ~gfhgls~~~~aE~~~~g~~~--~~~~~~~v~~~lGtGi-G~g~i~~G~~~~G 200 (381)
T 1saz_A 151 SIFHALNQKTVAKEVARMMNK--RYEEMNLVVAHMGGGI-SIAAHRKGRVIDV 200 (381)
T ss_dssp CCSCHHHHHHHHHHHHHHTTC--CGGGCEEEEEEESSSE-EEEEEETTEEEEE
T ss_pred cccccccHHHHHHHHHHhcCC--CCccCCEEEEEeCCCc-EEEEEECCEEEEe
Confidence 2211 1122268999999987 5555667877655
No 71
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=79.89 E-value=22 Score=34.76 Aligned_cols=128 Identities=12% Similarity=0.065 Sum_probs=76.1
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCC-HHHHHHHHHHHHHHHHHHHHcCCCcccEEEEe
Q 008124 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSIS-TQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (577)
Q Consensus 15 ~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls-~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (577)
+..||+|..+++..+++ + | +++.+.+.+. . ... ..+ ++.+++..+.++..... ....+ .-.+++
T Consensus 2 ~lgiDiGGT~~~~~l~d-~--g--~il~~~~~~~--~-~~~---~~~~~~~~~~i~~~i~~~~~~-~~~~i---~~igig 66 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-E--G--KSLGRFQTSG--I-NPF---QQDRNEIDTALRSEVLPAIGQ-KASSI---RAVYFY 66 (291)
T ss_dssp EEEEEECSSEEEEEEEE-T--T--EEEEEEEEEC--C-CTT---TSCHHHHHHHHTTTTHHHHTT-STTTC---CEEEEE
T ss_pred EEEEEeCccceEEEEEe-C--C--eEEEEEECCC--C-Ccc---cCCHHHHHHHHHHHHHHHhCC-Ccccc---cEEEEE
Confidence 57899999999999997 4 4 3454433221 0 100 112 34455555555433210 00112 235667
Q ss_pred ehhhhhcCChHHHHHHHHHHcCC--cEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEE
Q 008124 94 TAAVRAAENKDEFVECVREKVGF--EVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVV 166 (577)
Q Consensus 94 TsA~R~A~N~~~fl~~i~~~tGl--~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~ 166 (577)
+...- ..++..+.+.+++.++. ++.|-+.-.=|.+.-. . .++++++=+|.||--..+..+|++.
T Consensus 67 ~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~------g--~~~~v~v~~GTGigg~~i~~~G~~~ 132 (291)
T 1zbs_A 67 GAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC------G--DSEGIACILGTGSNSCLFDGREIKA 132 (291)
T ss_dssp ETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT------T--TSCEEEEEESSSEEEEEECSSSEEE
T ss_pred CCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc------C--CCCcEEEEecCChheEEECCCCcEE
Confidence 77654 45566788889999995 9999887766555431 2 2447777799999655555577764
No 72
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=79.11 E-value=22 Score=35.58 Aligned_cols=133 Identities=11% Similarity=0.078 Sum_probs=76.5
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCC-HHHHHHHHHHHHHHHHHHHHcCCCcccEEEE
Q 008124 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSIS-TQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (577)
Q Consensus 14 ~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls-~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (577)
.+..||||.+.+++.+++. +|. ++.+.+.++. . -+ ++.++...+.++++.. .++.. .-.++
T Consensus 25 ~~lgiDiGgt~i~~~l~d~--~G~--il~~~~~~~~------~---~~~~~~~~~i~~~i~~~~~---~~~~~--~gigi 86 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNE--KLE--RVATERVPTP------T---DDYPLLLETIAGLVAKYDQ---EFACE--GKIGL 86 (327)
T ss_dssp CEEEEEECSSEEEEEEECT--TCC--EEEEEEEECC------T---TCHHHHHHHHHHHHHHHHH---HHTSC--CEEEE
T ss_pred EEEEEEECCCEEEEEEEeC--CCc--EEEEEEecCC------C---CCHHHHHHHHHHHHHHHHH---hcCCc--cEEEE
Confidence 5789999999999999865 354 4544443321 0 12 3334444444444432 23321 23455
Q ss_pred eehhhhhcC------------ChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEe
Q 008124 93 ATAAVRAAE------------NKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIG 160 (577)
Q Consensus 93 ATsA~R~A~------------N~~~fl~~i~~~tGl~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~ 160 (577)
|....-+.+ +.-.+.+.+++++|++|.|.+.-.=+-+.-.-.-.. ...++.+++-+|.| +-..++
T Consensus 87 ~~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~~pV~v~NDa~aaalgE~~~g~~--~~~~~~~~l~~GtG-iG~gii 163 (327)
T 4db3_A 87 GLPGMEDADDATVLTVNVPAAKGKPLRADLEAKIGRSVKIENDANCFALSEAWDEEL--QDAPSVMGLILGTG-FGGGLI 163 (327)
T ss_dssp EESEEECTTTCCEEESSSGGGTTSCHHHHHHHHHSSCCEEEEHHHHHHHHHHTSTTT--TTCSEEEEEEESSS-EEEEEE
T ss_pred EeeccEeCCCCEEEcCCCccccCCCHHHHHHHHHCCCEEEecchhHHHHHHHHhCCC--CCCCcEEEEEeCcc-ceEEEE
Confidence 554443321 223567888999999999988765554443211011 12345788999988 666666
Q ss_pred eCCeEEE
Q 008124 161 KRGKVVF 167 (577)
Q Consensus 161 ~~~~~~~ 167 (577)
-+|++..
T Consensus 164 ~~G~l~~ 170 (327)
T 4db3_A 164 YEGKVFS 170 (327)
T ss_dssp ETTEECC
T ss_pred ECCEEee
Confidence 7787653
No 73
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=77.88 E-value=5.8 Score=42.66 Aligned_cols=75 Identities=12% Similarity=0.109 Sum_probs=43.6
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCHH-HHHHHHHHHHHHHHHHHHcCCCcccE
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQ-SQARSVESLLMFRDIIQSHNISRDHT 89 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~--Ls~e-~i~r~~~~L~~f~~~~~~~~v~~~~i 89 (577)
+.+.+||+|+.|+|..+++ .+|. ++.+.+.+... .....|. -+++ -.+.+++++++. ++..+++..+|
T Consensus 7 ~~~lgIDiGtts~k~~l~d--~~G~--il~~~~~~~~~--~~p~~g~~e~dp~~~~~~i~~~i~~~---~~~~~~~~~~I 77 (508)
T 3ifr_A 7 RQVIGLDIGTTSTIAILVR--LPDT--VVAVASRPTTL--SSPHPGWAEEDPAQWWDNARAVLAEL---KTTAGESDWRP 77 (508)
T ss_dssp CEEEEEEECSSEEEEEEEE--TTTE--EEEEEEEECCC--BCSSTTCCEECHHHHHHHHHHHHHHH---HHHHCGGGCCE
T ss_pred CEEEEEEecCcceEEEEEC--CCCC--EEEEEEEecce--ecCCCCceEECHHHHHHHHHHHHHHH---HHhcCCChhhe
Confidence 5788999999999999997 3563 45554444322 1112222 2333 344455555544 44446655578
Q ss_pred EEEeehh
Q 008124 90 RAVATAA 96 (577)
Q Consensus 90 ~~vATsA 96 (577)
.+|+-++
T Consensus 78 ~~Igis~ 84 (508)
T 3ifr_A 78 GGICVTG 84 (508)
T ss_dssp EEEEEEE
T ss_pred EEEEEEC
Confidence 7776444
No 74
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=77.80 E-value=60 Score=32.46 Aligned_cols=148 Identities=13% Similarity=0.153 Sum_probs=82.2
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHH-HHHHHHHHHcCCCcccEEEEe
Q 008124 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESL-LMFRDIIQSHNISRDHTRAVA 93 (577)
Q Consensus 15 ~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L-~~f~~~~~~~~v~~~~i~~vA 93 (577)
+-.||.++......+++ ++. ++....+ |+-. ...|..++++-..-.+.| .-+.+.+++.|++..++.+||
T Consensus 3 iLgIdts~~~~~val~~---~g~--i~~~~~~--~~~~--~~gg~~p~~~~~~h~~~l~~~i~~~L~~agi~~~did~Ia 73 (330)
T 2ivn_A 3 ALGIEGTAHTLGIGIVS---EDK--VLANVFD--TLTT--EKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIA 73 (330)
T ss_dssp EEEEECSSSEEEEEEEC---SSC--EEEEEEE--ECCC--TTCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEE
T ss_pred EEEEEccCCCeEEEEEE---CCE--EEEEEEE--Eeec--ccCCcCchhhHHHHHHHHHHHHHHHHHHcCCCHHHCcEEE
Confidence 67899999999988873 343 3433222 2221 112444333333333333 345566666677665666666
Q ss_pred eh-------hhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEE
Q 008124 94 TA-------AVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVV 166 (577)
Q Consensus 94 Ts-------A~R~A~N~~~fl~~i~~~tGl~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~ 166 (577)
.+ ++|.. -.|.+.+....++++..++-- +|... ++.. .+. +.+ +++.+.||.|+++..+++++.
T Consensus 74 ~~~GPG~~~~lrvg---~~~ak~la~~~~~pl~~v~h~-~aHa~--~a~~-~~~-~~~-~~l~v~GG~t~~i~~~~~~~~ 144 (330)
T 2ivn_A 74 FSQGPGLGPALRVV---ATAARALAVKYRKPIVGVNHC-IAHVE--ITKM-FGV-KDP-VGLYVSGGNTQVLALEGGRYR 144 (330)
T ss_dssp EEEESSCHHHHHHH---HHHHHHHHHHTTCCEEEEEHH-HHHHH--GGGG-GTC-CSC-EEEEECSSCEEEEEEETTEEE
T ss_pred EECCCCchHHHHHH---HHHHHHHHHHcCCCEEeeCcH-HHHHH--HHhh-cCC-CCC-eEEEEcCCCceEEEEcCCeEE
Confidence 42 34542 346666667788888877653 44321 2222 222 223 667777789999988877765
Q ss_pred EE-EEEehhHHHHHH
Q 008124 167 FC-ESVNLGHVSLSE 180 (577)
Q Consensus 167 ~~-~SlplG~vrl~e 180 (577)
.. .+++-++=++.+
T Consensus 145 ~lg~t~dds~Gr~fD 159 (330)
T 2ivn_A 145 VFGETLDIGIGNAID 159 (330)
T ss_dssp EEEEBSSSCHHHHHH
T ss_pred EEEeecCchhHHHHH
Confidence 32 344444444444
No 75
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=77.49 E-value=5.8 Score=42.89 Aligned_cols=77 Identities=14% Similarity=0.220 Sum_probs=46.3
Q ss_pred CceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCHHHH-HHHHHHHHHHHHHHHHcCCCccc
Q 008124 12 QTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQSQ-ARSVESLLMFRDIIQSHNISRDH 88 (577)
Q Consensus 12 ~~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~--Ls~e~i-~r~~~~L~~f~~~~~~~~v~~~~ 88 (577)
++.+.+||+||.|+|.++++ .+|++ +.....+... .....|. -+++.+ +.+++++ ++.++..++++.+
T Consensus 3 kkYvlgID~GTss~Ka~l~d--~~G~~--va~~~~~~~~--~~p~~G~~Eqdp~~~w~~~~~~i---~~~l~~~~~~~~~ 73 (526)
T 3ezw_A 3 KKYIVALDQGTTSSRAVVMD--HDANI--ISVSQREFEQ--IYPKPGWVEHDPMEIWATQSSTL---VEVLAKADISSDQ 73 (526)
T ss_dssp CCEEEEEEECSSEEEEEEEC--TTCCE--EEEEEEECCC--BCSSTTCCEECHHHHHHHHHHHH---HHHHHHHTCCGGG
T ss_pred ceEEEEEEccccceeeeEEc--CCCCE--EEEEEEecCc--ccCCCCcEEECHHHHHHHHHHHH---HHHHHHcCCChhh
Confidence 45789999999999999986 45653 4333333222 1122232 244443 3444444 4555666888788
Q ss_pred EEEEeehhh
Q 008124 89 TRAVATAAV 97 (577)
Q Consensus 89 i~~vATsA~ 97 (577)
|.+|+-++.
T Consensus 74 I~aIgis~q 82 (526)
T 3ezw_A 74 IAAIGITNQ 82 (526)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEeCC
Confidence 999884443
No 76
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=77.09 E-value=32 Score=34.41 Aligned_cols=134 Identities=10% Similarity=0.023 Sum_probs=79.6
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEE--
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR-- 90 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~-- 90 (577)
..+..||||.+++++.+++. +|. ++.+.+.+.. . -.++.++...+.++++.+.... +..++.
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~--~G~--il~~~~~~~~------~---~~~~~~~~i~~~i~~~~~~~~~---~~~~i~gi 93 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSM--KGE--IVKKYTQFNP------K---TYEERINLILQMCVEAAAEAVK---LNCRILGV 93 (343)
T ss_dssp EEEEEEEECSSEEEEEEEET--TSC--EEEEEEEECC------S---SHHHHHHHHHHHHHHHHHHHHH---TTEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECC--CCc--EEEEEEEcCC------C---CHHHHHHHHHHHHHHHHHhccc---ccCceEEE
Confidence 45788999999999999975 354 3443333321 1 1245567777777776543321 112343
Q ss_pred EEeehhh--------hhcCCh------HHHHHHHHHHcCCcEEEeChHHHHHHHHh--hhhccCCCCCCceEEEEeCCCc
Q 008124 91 AVATAAV--------RAAENK------DEFVECVREKVGFEVDVLTGEQEAKFVYM--GVLQFLPVFDRLVLSVDIGGGS 154 (577)
Q Consensus 91 ~vATsA~--------R~A~N~------~~fl~~i~~~tGl~i~VIsg~eEA~l~~~--gv~~~~~~~~~~~lviDIGGGS 154 (577)
+++.... ..+.|- -.+.+.+++++|++|.|.+.-.=|-+.-. |... ..++.+++-+|.|
T Consensus 94 gi~~pG~vd~~~g~v~~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~~~----~~~~~v~i~~GtG- 168 (343)
T 2yhw_A 94 GISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGK----GLENFVTLITGTG- 168 (343)
T ss_dssp EEEESSEEETTTTEEEECCTTSSSCSSEECHHHHHHHHCSCEEEEEHHHHHHHHHHHTSTTT----TCSCEEEEEESSS-
T ss_pred EEecccCEeCCCCEEEeCCcCCCCCcCCCHHHHHHHHHCCCEEEechhHHHHHHHHHhCCCC----CCCcEEEEEECCC-
Confidence 3444332 223332 24567888899999999886655555432 2211 2245899999988
Q ss_pred eEEEEeeCCeEEE
Q 008124 155 TEFVIGKRGKVVF 167 (577)
Q Consensus 155 tEl~~~~~~~~~~ 167 (577)
+-..+.-+|++..
T Consensus 169 iG~gii~~G~l~~ 181 (343)
T 2yhw_A 169 IGGGIIHQHELIH 181 (343)
T ss_dssp EEEEEEETTEECC
T ss_pred EEEEEEECCEEec
Confidence 5666777777654
No 77
>2pgs_A Putative deoxyguanosinetriphosphate triphosphohyd; deoxyguanosinetriphosphate triphsphohydrolase, pseudomonas S PV. phaseolicola 1448A; 2.35A {Pseudomonas syringae PV}
Probab=76.61 E-value=2.7 Score=44.59 Aligned_cols=46 Identities=17% Similarity=0.315 Sum_probs=32.1
Q ss_pred hhHHHHHHHHHHHHHHHhhc-cc-ccchhhhhhcccCcch-HHHHHHHHHHhhccc
Q 008124 361 KAGAQCASIAKDIFEGLRKC-DK-LYNNQVKLIASFEDKD-LEYLEAACLLHNIGH 413 (577)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~-~~-l~~~~~~~~~~~~~~~-r~LL~~Aa~LHdIG~ 413 (577)
.|+.-|+.+|..+...|... .. ++. ..++++ +.++++||++||||.
T Consensus 65 ~Hsl~v~~ia~~~~~~l~~~~~~~~~~-------~~~~~~~~~~v~~a~L~HDiGH 113 (451)
T 2pgs_A 65 THSLEVSCVGRSLGMRVGETLRAALPD-------WCDPSDLGMVVQSACLAHDIGN 113 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGSCT-------TCCHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccccc-------ccchhHHHHHHHHHHHhhccCC
Confidence 79999999999988888742 11 110 122223 359999999999995
No 78
>3ljx_A MMOQ response regulator; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Methylococcus capsulatus} PDB: 3ljv_A 3p3q_A
Probab=76.37 E-value=6.6 Score=38.85 Aligned_cols=38 Identities=13% Similarity=0.067 Sum_probs=27.2
Q ss_pred hhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHHhhccccc
Q 008124 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT 415 (577)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~~I 415 (577)
.|+..|+.+|..| +...+. . +..-+..|++|||||+.+
T Consensus 111 ~hs~~~A~~a~~l----a~~~~~-----------~--~~~~~~~agLLhdiGkl~ 148 (288)
T 3ljx_A 111 QKSLARAVALQSI----TAQAST-----------V--APKEAFTLGLLADVGRLA 148 (288)
T ss_dssp HHHHHHHHHHHHH----HHTSSS-----------S--CHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHH----HHHCCC-----------C--CHHHHHHHHHHHhccHHH
Confidence 6888888888864 444332 1 235688999999999865
No 79
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=75.84 E-value=6.7 Score=42.50 Aligned_cols=77 Identities=10% Similarity=0.046 Sum_probs=43.3
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeee--c-----cCCCc--CC--CCCH-HHHHHHHHHHHHHHHHHH
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVIL--G-----RDLSS--SC--SIST-QSQARSVESLLMFRDIIQ 80 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrL--g-----~~~~~--~g--~Ls~-e~i~r~~~~L~~f~~~~~ 80 (577)
+.+.+||+||.|+|.++++. +|.+ +.....+... - .|... .| +-++ +....++.++.+ .+.
T Consensus 10 ~~~lgID~GTts~Ka~l~d~--~G~v--v~~~~~~~~~~~p~~~~~~g~~e~~~g~~eqdp~~~w~~~~~~~~~---~l~ 82 (538)
T 4bc3_A 10 RCCLGWDFSTQQVKVVAVDA--ELNV--FYEESVHFDRDLPEFGTQGGVHVHKDGLTVTSPVLMWVQALDIILE---KMK 82 (538)
T ss_dssp CEEEEEEECSSEEEEEEEET--TCCE--EEEEEEEHHHHSGGGCCBTTBEECTTSSCEEEEHHHHHHHHHHHHH---HHH
T ss_pred CEEEEEEEcCcCEEEEEECC--CCCE--EEEEEEecCCcCCcccCCCCeeecCCCccccCcHHHHHHHHHHHHH---HHH
Confidence 68899999999999999973 5653 4433333211 1 11111 11 1223 344555544432 334
Q ss_pred HcCCCcccEEEEeehh
Q 008124 81 SHNISRDHTRAVATAA 96 (577)
Q Consensus 81 ~~~v~~~~i~~vATsA 96 (577)
..+++..+|.+|+-++
T Consensus 83 ~~~~~~~~I~aIgis~ 98 (538)
T 4bc3_A 83 ASGFDFSQVLALSGAG 98 (538)
T ss_dssp HTTCCGGGEEEEEEEE
T ss_pred HcCCChHHeEEEEecc
Confidence 5677667898887443
No 80
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=75.15 E-value=9.6 Score=40.81 Aligned_cols=74 Identities=14% Similarity=0.251 Sum_probs=43.3
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCHHH-HHHHHHHHHHHHHHHHHcCCCcccE
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQS-QARSVESLLMFRDIIQSHNISRDHT 89 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~--Ls~e~-i~r~~~~L~~f~~~~~~~~v~~~~i 89 (577)
+.+.+||+|+.|+|..+++. +|.+ +.+.+.+... .....|. -.++. .+.++++++ +++++.+++..+|
T Consensus 6 ~~~lgIDiGtts~k~~l~d~--~G~i--l~~~~~~~~~--~~p~~g~~e~d~~~~~~~~~~~i~---~~~~~~~~~~~~I 76 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQ--KGEI--AGVAQREFKQ--YFPQSGWVEHDANEIWTSVLAVMT---EVINENDVRADQI 76 (501)
T ss_dssp CEEEEEEECSSEEEEEEECT--TSCE--EEEEEEECCC--BCSSTTCCEECHHHHHHHHHHHHH---HHHHTTTCCGGGE
T ss_pred cEEEEEEeCccceEEEEEcC--CCCE--EEEEEeeccc--ccCCCCcEEECHHHHHHHHHHHHH---HHHHhcCCCcccE
Confidence 47899999999999999964 4543 4444433321 1122232 23333 344444554 4455667766678
Q ss_pred EEEeeh
Q 008124 90 RAVATA 95 (577)
Q Consensus 90 ~~vATs 95 (577)
.+|+-+
T Consensus 77 ~~Igis 82 (501)
T 3g25_A 77 AGIGIT 82 (501)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 887744
No 81
>3m1t_A Putative phosphohydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE GOL; 1.62A {Shewanella amazonensis} SCOP: a.211.1.0
Probab=75.08 E-value=5.3 Score=39.22 Aligned_cols=38 Identities=21% Similarity=0.194 Sum_probs=27.2
Q ss_pred hhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccC
Q 008124 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTS 416 (577)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~~I~ 416 (577)
.|+..|+.+|..|-..+ ++ + ...+..|++|||||..+-
T Consensus 108 ~hs~~~a~~a~~la~~~----~~-----------~---~~~~~~agLLhdiGkl~l 145 (275)
T 3m1t_A 108 GNTFEVAIICQELAKRL----GT-----------L---PEEAFTCGILHSIGELLI 145 (275)
T ss_dssp HHHHHHHHHHHHHHHHH----TS-----------C---HHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh----CC-----------C---HHHHHHHHHHHHccHHHH
Confidence 58888888888754333 32 1 245889999999998763
No 82
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=74.52 E-value=37 Score=33.56 Aligned_cols=127 Identities=16% Similarity=0.246 Sum_probs=74.5
Q ss_pred CceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEE
Q 008124 12 QTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRA 91 (577)
Q Consensus 12 ~~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~ 91 (577)
++.+..||||..++++.+++. +|. ++.+.+.++. + .++.+++.. +.++++.+ .-.+
T Consensus 2 ~~~~lgiDiGgt~i~~~l~d~--~G~--il~~~~~~t~-------~---~~~~l~~i~-------~~~~~~~i---~gig 57 (302)
T 3epq_A 2 NAMLGGIEAGGTXFVCAVGRE--DGT--IIDRIEFPTX-------M---PDETIEXVI-------QYFSQFSL---QAIG 57 (302)
T ss_dssp -CCEEEEEECSSEEEEEEECT--TSC--EEEEEEEECC-------C---HHHHHHHHH-------HHHTTSCC---SEEE
T ss_pred CcEEEEEEECcceeEEEEEEC--CCc--EEEEEEecCC-------C---hHHHHHHHH-------HHhccCCc---eEEE
Confidence 345789999999999999864 454 3544444431 0 122333222 23333344 2345
Q ss_pred Eeehh-------------hhhcCC----hHHHHHHHHHHcCCcEEEeChHHHHHHHH--hhhhccCCCCCCceEEEEeCC
Q 008124 92 VATAA-------------VRAAEN----KDEFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVLSVDIGG 152 (577)
Q Consensus 92 vATsA-------------~R~A~N----~~~fl~~i~~~tGl~i~VIsg~eEA~l~~--~gv~~~~~~~~~~~lviDIGG 152 (577)
+|+.. +..+.| .-.+.+.+++++|++|.+.+.-.=|-+.- +|... ..++.+++-+|.
T Consensus 58 i~~pG~vd~~~~~~~~G~i~~~~~~~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~~G~~~----~~~~~~~l~~Gt 133 (302)
T 3epq_A 58 IGSFGPVDNDXTSQTYGTITATPXAGWRHYPFLQTVXNEMXIPVGFSTDVNAAALGEFLFGEAX----GLDSCLYITIGT 133 (302)
T ss_dssp EEECSSEECCTTSTTTTEECCCSSTTTBTCCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTT----TCSCEEEEEESS
T ss_pred EEeceeeccccccccccEEecCCCCCccCCChHHHHHHHhCCCEEEechhHHHHHHHHHhCCCC----CCCcEEEEEECC
Confidence 55432 223333 23567889999999999988766554442 23222 124578888887
Q ss_pred CceEEEEeeCCeEEE
Q 008124 153 GSTEFVIGKRGKVVF 167 (577)
Q Consensus 153 GStEl~~~~~~~~~~ 167 (577)
| +--.++-+|++..
T Consensus 134 G-iG~gii~~G~l~~ 147 (302)
T 3epq_A 134 G-IGAGAIVEGRLLQ 147 (302)
T ss_dssp S-EEEEEEETTEECC
T ss_pred c-eEEEEEECCEEcc
Confidence 6 5556666787764
No 83
>3mem_A Putative signal transduction protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.25A {Marinobacter aquaeolei}
Probab=74.37 E-value=11 Score=39.87 Aligned_cols=65 Identities=15% Similarity=0.182 Sum_probs=36.5
Q ss_pred HHHHHHHcCCcEEEeChHHHHHHH-H--hhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEEE
Q 008124 107 VECVREKVGFEVDVLTGEQEAKFV-Y--MGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESV 171 (577)
Q Consensus 107 l~~i~~~tGl~i~VIsg~eEA~l~-~--~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~~Sl 171 (577)
++.+++.+|-+++..+.+|=.++. + .|..+.+.....-.+++|-.==..+-+++..|.......+
T Consensus 57 lk~l~~~~g~k~~~~~~~~~~~~~~g~~~Ggv~P~g~~~~~~~~iD~~l~~~~~i~~~~G~~~~~i~l 124 (457)
T 3mem_A 57 LEALNKRLGRDLRMMQRREQVRVRQKAGLQELPALPSLTGWPTVVDRRVDELEAVALELGEQDLGLMM 124 (457)
T ss_dssp HHHHHHHHTCCCEECCHHHHHHHHHHHTCSSCCSCGGGTCCCEEEEHHHHHCSEEEEECSSSSEEEEE
T ss_pred HHHHHHHhCCCCeeCCHHHHHHHcCCCCCCCCCCCCCCcCCCEEEehhhccCCEEEEECCCCCceEEE
Confidence 456667777777777777666653 2 3555544432333467775444445556655554444333
No 84
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=73.64 E-value=20 Score=35.66 Aligned_cols=133 Identities=16% Similarity=0.168 Sum_probs=74.8
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEE--
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR-- 90 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~-- 90 (577)
..+..||||.++++..+++. +|. ++.+.+.++ .+. ..++.++...+.++++. +.++. ++.
T Consensus 7 ~~~lgiDiGgt~i~~~l~d~--~G~--il~~~~~~~--~~~------~~~~~~~~i~~~i~~~~---~~~~~---~i~gi 68 (310)
T 3htv_A 7 NVVAGVDMGATHIRFCLRTA--EGE--TLHCEKKRT--AEV------IAPGLVSGIGEMIDEQL---RRFNA---RCHGL 68 (310)
T ss_dssp EEEEEEEECSSEEEEEEEET--TSC--EEEEEEEEH--HHH------HTTCHHHHHHHHHHHHH---HHHTE---EEEEE
T ss_pred CEEEEEEeCCCEEEEEEECC--CCC--EEEEEEecC--ccc------cHHHHHHHHHHHHHHHH---HhcCC---CeeEE
Confidence 46789999999999999975 354 344333332 111 01223444444444433 33332 233
Q ss_pred EEeeh--------hhhhcCCh-------HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCce
Q 008124 91 AVATA--------AVRAAENK-------DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGST 155 (577)
Q Consensus 91 ~vATs--------A~R~A~N~-------~~fl~~i~~~tGl~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGSt 155 (577)
.+|.. .++.+.|- -.+.+.+++++|++|.+.+.-.=|-+....- ... ...+.+++-+|.| +
T Consensus 69 gi~~pG~vd~~~g~v~~~~~l~~~~~~~~~l~~~l~~~~~~pv~v~NDanaaa~~e~~~-~~~--~~~~~~~v~~GtG-i 144 (310)
T 3htv_A 69 VMGFPALVSKDKRTIISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQLSWDVVE-NRL--TQQLVLAAYLGTG-M 144 (310)
T ss_dssp EEEESSCBCTTSSCBCSCCSSSCCHHHHTTHHHHHHHHHTSCEEEEEHHHHHHHHHHHH-TTC--TTSCEEEEEESSS-E
T ss_pred EEeccccEeCCCCEEEeCCCCCCccccCccHHHHHHHHhCCCEEEeeHHHHHHHHHHhh-ccc--CCceEEEEEecee-E
Confidence 33332 23445553 1467899999999999988776554432211 112 2345778888875 4
Q ss_pred EEEEeeCCeEEE
Q 008124 156 EFVIGKRGKVVF 167 (577)
Q Consensus 156 El~~~~~~~~~~ 167 (577)
--.++-+|++..
T Consensus 145 G~gii~~G~l~~ 156 (310)
T 3htv_A 145 GFAVWMNGAPWT 156 (310)
T ss_dssp EEEEEETTEEEC
T ss_pred EEEEEECCEEee
Confidence 444556777754
No 85
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=73.23 E-value=47 Score=32.88 Aligned_cols=133 Identities=11% Similarity=0.101 Sum_probs=78.9
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEE
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (577)
..+..||||.+.+++.+++. +|. ++.+.+.++. . . =.++.++.+.+.++++.. ..+. ..-.++
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~--~g~--il~~~~~~~~--~----~--~~~~~~~~i~~~i~~~~~---~~~~--i~~igi 86 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDS--TRR--LQWEKRVPTP--H----T--SYSAFLDAVCELVEEADQ---RFGV--KGSVGI 86 (327)
T ss_dssp CEEEEEEECSSEEEEEEEET--TCC--EEEEEEEECC--C----S--CHHHHHHHHHHHHHHHHH---HHTS--CCEEEE
T ss_pred ceEEEEEECCCEEEEEEEeC--CCC--EEEEEEecCC--C----C--CHHHHHHHHHHHHHHHHH---hcCC--ccEEEE
Confidence 45789999999999999975 354 3444433321 1 1 024455555555555443 2221 123566
Q ss_pred eehhhhhcC-------Ch-----HHHHHHHHHHcCCcEEEeChHHHHHHHHh--hhhccCCCCCCceEEEEeCCCceEEE
Q 008124 93 ATAAVRAAE-------NK-----DEFVECVREKVGFEVDVLTGEQEAKFVYM--GVLQFLPVFDRLVLSVDIGGGSTEFV 158 (577)
Q Consensus 93 ATsA~R~A~-------N~-----~~fl~~i~~~tGl~i~VIsg~eEA~l~~~--gv~~~~~~~~~~~lviDIGGGStEl~ 158 (577)
|....-+.. |. -.+.+.+++.+|++|.|.+.-.=|-+.-. |... ..++.+++-+|.| +-..
T Consensus 87 ~~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~~pv~v~NDa~aaalgE~~~g~~~----~~~~~v~l~~GtG-iG~g 161 (327)
T 2ap1_A 87 GIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRLDNDANCFALSEAWDDEFT----QYPLVMGLILGTG-VGGG 161 (327)
T ss_dssp EESSBSCCTTSCCBCTTCTTTTTSCHHHHHHHHHTSCEEEEEHHHHHHHHHHTSTTGG----GCSEEEEEEESSS-EEEE
T ss_pred EeeeeEECCCCEEEccCCCccCCCChHHHHHHHHCCCEEEecHHHHHHHHHHHhCcCC----CCCcEEEEEECCc-EEEE
Confidence 665543221 21 24567888889999999887766655432 2211 2245788999998 5566
Q ss_pred EeeCCeEEE
Q 008124 159 IGKRGKVVF 167 (577)
Q Consensus 159 ~~~~~~~~~ 167 (577)
+.-+|++..
T Consensus 162 iv~~G~l~~ 170 (327)
T 2ap1_A 162 LVLNGKPIT 170 (327)
T ss_dssp EEETTEEEC
T ss_pred EEECCEEee
Confidence 777777654
No 86
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=73.05 E-value=16 Score=35.84 Aligned_cols=131 Identities=11% Similarity=0.140 Sum_probs=70.4
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEEee
Q 008124 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVAT 94 (577)
Q Consensus 15 ~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vAT 94 (577)
+-+||||-.++++-+++ ++ +++...+.++. . -+.+.+ ...++++++.++.+..+|..++=
T Consensus 4 lL~IDIGNT~iK~gl~d---~~--~l~~~~r~~T~-~--------~t~de~------~~~l~~ll~~~~~~~~~I~~iiI 63 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFD---GD--EIKLRFRHTSK-V--------STSDEL------GIFLKSVLRENNCSPETIRKIAI 63 (266)
T ss_dssp EEEEEECSSEEEEEEEE---TT--EEEEEEEEECS-C--------CCHHHH------HHHHHHHHHTTTCCGGGCCEEEE
T ss_pred EEEEEECCCeEEEEEEE---CC--EEEEEEEecCC-C--------CCHHHH------HHHHHHHHHHcCCChhhceEEEE
Confidence 67999999999999995 23 44555544432 1 123322 23345566667765445544444
Q ss_pred hhhhhcCChHHHHHHHHHHcCCcEEEeChHHHH----------------HHHHhhhhccCCCCCCceEEEEeCCCceEEE
Q 008124 95 AAVRAAENKDEFVECVREKVGFEVDVLTGEQEA----------------KFVYMGVLQFLPVFDRLVLSVDIGGGSTEFV 158 (577)
Q Consensus 95 sA~R~A~N~~~fl~~i~~~tGl~i~VIsg~eEA----------------~l~~~gv~~~~~~~~~~~lviDIGGGStEl~ 158 (577)
+.+.-. -...+...+++..+.++.+++..... .....|+....+ ..+.+|+|.|..-|==.
T Consensus 64 SSVvp~-~~~~l~~~~~~~~~~~~~~v~~~~~~g~~~~y~~P~~lG~DR~~~~vaA~~~~~--~~~~iVVD~GTA~T~d~ 140 (266)
T 3djc_A 64 CSVVPQ-VDYSLRSACVKYFSIDPFLLQAGVKTGLNIKYRNPVEVGADRIANAIAATHSFP--NQNIIVIDFGTATTFCA 140 (266)
T ss_dssp EESCHH-HHHHHHHHHHHHTCCCCEECCSSSCCCCEECCSSGGGSCHHHHHHHHHHHHHST--TSEEEEEEESSEEEEEE
T ss_pred ecchHh-HHHHHHHHHHHHcCCCeEEEcCCCCCCcccCCCChhhhHHHHHHHHHHHHHhcC--CCCEEEEECCCeeEEEE
Confidence 433322 12344445555667777777622110 122223333222 34689999999988333
Q ss_pred EeeCCeEEEE
Q 008124 159 IGKRGKVVFC 168 (577)
Q Consensus 159 ~~~~~~~~~~ 168 (577)
+-.+|...-.
T Consensus 141 v~~~g~~lGG 150 (266)
T 3djc_A 141 ISHKKAYLGG 150 (266)
T ss_dssp ECTTSEEEEE
T ss_pred EcCCCcEEEE
Confidence 3444555433
No 87
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=72.91 E-value=19 Score=35.27 Aligned_cols=114 Identities=14% Similarity=0.128 Sum_probs=67.5
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCC-HHHHHHHHHHHHHHHHHHHHcCCCcccEEEE
Q 008124 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSIS-TQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (577)
Q Consensus 14 ~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls-~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (577)
.+..||+|..++++.+++. +|. ++.+.+.+.. . . -..+ ++.++...+.++++.+ .. + ...++
T Consensus 3 ~~lgiDiGgt~~~~~l~d~--~g~--i~~~~~~~~~---~-~--~~~~~~~~~~~i~~~i~~~~~---~~-~---~~igi 65 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDC--EGN--FIGEGSSGPG---N-Y--HNVGLTRAIENIKEAVKIAAK---GE-A---DVVGM 65 (299)
T ss_dssp CEEEEEECSSCEEEEEECT--TSC--EEEEEEESCC---C-H--HHHCHHHHHHHHHHHHHHHHT---SC-C---SEEEE
T ss_pred EEEEEEeCCCcEEEEEEcC--CCC--EEEEEeCCCC---C-c--ccCCHHHHHHHHHHHHHHHHh---cC-C---CEEEE
Confidence 4688999999999999864 454 3443332210 0 0 0012 3445555555555432 21 3 35678
Q ss_pred eehhhhhcCCh-HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCc
Q 008124 93 ATAAVRAAENK-DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGS 154 (577)
Q Consensus 93 ATsA~R~A~N~-~~fl~~i~~~tGl~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGS 154 (577)
|.... +..++ ..+.+.+++ +|+++.+.+.-.=+.+.- .. .++.+++-+|.|+
T Consensus 66 ~~~G~-~~~~~~~~l~~~l~~-~~~pv~v~ND~~aaa~~e---~~-----~~~~v~l~~GTG~ 118 (299)
T 2e2o_A 66 GVAGL-DSKFDWENFTPLASL-IAPKVIIQHDGVIALFAE---TL-----GEPGVVVIAGTGS 118 (299)
T ss_dssp EETTC-CSHHHHHHHHHHHTT-SSSEEEEEEHHHHHHHHH---HT-----TSCEEEEEESSSE
T ss_pred EcCCC-CchhHHHHHHHHHHh-CCCCEEEeCcHHHHHhhc---cC-----CCCeEEEEecCCE
Confidence 88887 54333 245566677 899998877655444432 21 2458899999996
No 88
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=72.64 E-value=10 Score=40.71 Aligned_cols=74 Identities=9% Similarity=0.034 Sum_probs=43.0
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCHHHH-HHHHHHHHHHHHHHHHcCCCcccE
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQSQ-ARSVESLLMFRDIIQSHNISRDHT 89 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~--Ls~e~i-~r~~~~L~~f~~~~~~~~v~~~~i 89 (577)
+.+.+||+|+.|+|..+++. +|. ++...+.+..+- ....|. -+++.+ +..++++++. + +.+++..+|
T Consensus 5 ~~~lgIDiGtts~k~~l~d~--~G~--il~~~~~~~~~~--~p~~g~~e~dp~~~~~~~~~~i~~~---~-~~~~~~~~I 74 (511)
T 3hz6_A 5 FYIATFDIGTTEVKAALADR--DGG--LHFQRSIALETY--GDGNGPVEQDAGDWYDAVQRIASSW---W-QSGVDARRV 74 (511)
T ss_dssp CEEEEEEECSSEEEEEEECT--TSC--EEEEEEEECCCB--STTSSCCEECHHHHHHHHHHHHHHH---H-TTTCCGGGE
T ss_pred cEEEEEEeCCCceEEEEECC--CCC--EEEEEEeeccee--cCCCCCEEECHHHHHHHHHHHHHHH---H-hcCCChhHe
Confidence 47899999999999999974 454 344444333221 122232 234433 3344555443 4 456666678
Q ss_pred EEEeehh
Q 008124 90 RAVATAA 96 (577)
Q Consensus 90 ~~vATsA 96 (577)
.+|+-++
T Consensus 75 ~~Igis~ 81 (511)
T 3hz6_A 75 SAIVLSG 81 (511)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 8887443
No 89
>3bg2_A DGTP triphosphohydrolase; structural genomics, NYSGXRC, target 10395N, triphosphohydro PSI-2, protein structure initiative; 1.95A {Leeuwenhoekiella blandensis}
Probab=71.88 E-value=2.6 Score=44.71 Aligned_cols=51 Identities=18% Similarity=0.208 Sum_probs=30.2
Q ss_pred hhHHHHHHHHHHHHHHHhhc-c-cccchhhhhhcccCcch-HHHHHHHHHHhhccc
Q 008124 361 KAGAQCASIAKDIFEGLRKC-D-KLYNNQVKLIASFEDKD-LEYLEAACLLHNIGH 413 (577)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~-~-~l~~~~~~~~~~~~~~~-r~LL~~Aa~LHdIG~ 413 (577)
.|+--|+.+|..+...|... . ..+. ... .....+++ ..++++||++||||.
T Consensus 67 tHSL~V~~iar~~~~~l~~~l~~~~~~-~~~-~~~~~~~~~~~lv~~a~L~HDiGH 120 (444)
T 3bg2_A 67 THSLEVSVVGRSLGRMVGKKLLEKYPH-LEQ-VYGYKFNDFGAIVAAAALAHDIGN 120 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTH-HHH-TTCCCHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccc-ccc-ccccchhhHHHHHHHHHHhcccCC
Confidence 78888888888877776431 0 0000 000 00012222 479999999999994
No 90
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=71.13 E-value=12 Score=40.00 Aligned_cols=76 Identities=14% Similarity=0.138 Sum_probs=44.0
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCC--CH-HHHHHHHHHHHHHHHHHHHcCCCcccE
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSI--ST-QSQARSVESLLMFRDIIQSHNISRDHT 89 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~L--s~-e~i~r~~~~L~~f~~~~~~~~v~~~~i 89 (577)
+.+.+||+|+.|+|..+++. +|. ++.+.+.+... .....|.. .+ +-.+.+++++++. ++..+++..+|
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~--~g~--~~~~~~~~~~~--~~p~~g~~e~d~~~~~~~~~~~i~~~---~~~~~~~~~~i 73 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDR--ESN--IHGIGQYEFPQ--HYPRPGWVEHNPEEIWDAQLRAIKDA---IQSARIEPNQI 73 (497)
T ss_dssp CEEEEEEECSSEEEEEEECT--TCC--EEEEEEEECCC--BCCSTTCCEECHHHHHHHHHHHHHHH---HHHHTCCGGGE
T ss_pred cEEEEEecCCchhEEEEECC--CCC--EEEEEEeccce--ecCCCCcEEECHHHHHHHHHHHHHHH---HHhcCCCcccE
Confidence 36889999999999999963 454 45444444322 11222322 23 3344555555544 44456665678
Q ss_pred EEEeehhh
Q 008124 90 RAVATAAV 97 (577)
Q Consensus 90 ~~vATsA~ 97 (577)
.+|+-++-
T Consensus 74 ~~Igis~~ 81 (497)
T 2zf5_O 74 AAIGVTNQ 81 (497)
T ss_dssp EEEEEEEC
T ss_pred EEEEEecC
Confidence 77774443
No 91
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=70.42 E-value=9 Score=41.10 Aligned_cols=74 Identities=16% Similarity=0.162 Sum_probs=43.0
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCHH-HHHHHHHHHHHHHHHHHHcCCCcccE
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQ-SQARSVESLLMFRDIIQSHNISRDHT 89 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~--Ls~e-~i~r~~~~L~~f~~~~~~~~v~~~~i 89 (577)
+.+.+||+|+.|+|..+++. +|. ++...+.+... .....|. -.++ -.+.+++++++ +++..+++..+|
T Consensus 5 ~~~lgIDiGtts~k~~l~d~--~G~--il~~~~~~~~~--~~p~~g~~e~dp~~~~~~~~~~i~~---~~~~~~~~~~~I 75 (506)
T 3h3n_X 5 NYVMAIDQGTTSSRAIIFDR--NGK--KIGSSQKEFPQ--YFPKSGWVEHNANEIWNSVQSVIAG---AFIESGIRPEAI 75 (506)
T ss_dssp CEEEEEEECSSEEEEEEEET--TSC--EEEEEEEECCC--BCSSTTCCEECHHHHHHHHHHHHHH---HHHHHTCCGGGE
T ss_pred CEEEEEEcCCCceEEEEECC--CCC--EEEEEEEecCc--cCCCCCcEEECHHHHHHHHHHHHHH---HHHHcCCChhhe
Confidence 57899999999999999974 454 34444443322 1112222 2333 34444455544 445557766678
Q ss_pred EEEeeh
Q 008124 90 RAVATA 95 (577)
Q Consensus 90 ~~vATs 95 (577)
.+|+-+
T Consensus 76 ~~Igis 81 (506)
T 3h3n_X 76 AGIGIT 81 (506)
T ss_dssp EEEEEE
T ss_pred EEEEee
Confidence 887744
No 92
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=69.00 E-value=9.4 Score=41.01 Aligned_cols=75 Identities=15% Similarity=0.230 Sum_probs=44.1
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCHHH-HHHHHHHHHHHHHHHHHcCCCcccE
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQS-QARSVESLLMFRDIIQSHNISRDHT 89 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~--Ls~e~-i~r~~~~L~~f~~~~~~~~v~~~~i 89 (577)
+.+.+||+|+.|+|..+++. +|. ++...+.+...- ....|. -+++. .+.++++++ +++++.+++..+|
T Consensus 3 ~~~lgIDiGtts~k~~l~d~--~G~--il~~~~~~~~~~--~p~~g~~e~dp~~~~~~~~~~i~---~~~~~~~~~~~~I 73 (510)
T 2p3r_A 3 KYIVALDQGTTSSRAVVMDH--DAN--IISVSQREFEQI--YPKPGWVEHDPMEIWATQSSTLV---EVLAKADISSDQI 73 (510)
T ss_dssp CEEEEEEECSSEEEEEEECT--TCC--EEEEEEEECCCB--CSSTTCCEECHHHHHHHHHHHHH---HHHHHTTCCGGGE
T ss_pred cEEEEEEcCCcceEEEEECC--CCC--EEEEEEEecccc--cCCCCcEEECHHHHHHHHHHHHH---HHHHHcCCChhhe
Confidence 46889999999999999964 454 344444443221 112222 23333 344444454 4455667776678
Q ss_pred EEEeehh
Q 008124 90 RAVATAA 96 (577)
Q Consensus 90 ~~vATsA 96 (577)
.+|+-++
T Consensus 74 ~~Igis~ 80 (510)
T 2p3r_A 74 AAIGITN 80 (510)
T ss_dssp EEEEEEE
T ss_pred EEEEEeC
Confidence 8887544
No 93
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=68.42 E-value=64 Score=31.65 Aligned_cols=132 Identities=14% Similarity=0.066 Sum_probs=77.7
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEEe
Q 008124 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (577)
Q Consensus 14 ~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (577)
.+..||||.+++++.+++.. + ++.+.+.++. ... .++.++...+.++.+.+.. ...+. -.++|
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~--~---~l~~~~~~~~------~~~--~~~~~~~i~~~i~~~~~~~-~~~i~---gigi~ 64 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGK--R---LLSKVVVPTP------KEG--GERVAEALAEAAERAEREA-GVRGE---AIGLG 64 (302)
T ss_dssp CEEEEEECSSEEEEEEECSS--S---BSCCEEEECC------SSC--HHHHHHHHHHHHHHHHHHH-TCCCS---SEEEE
T ss_pred EEEEEEEcCCEEEEEEEeCC--C---cEEEEEEcCC------CCC--hHHHHHHHHHHHHHHHhhc-cCCce---EEEEE
Confidence 36899999999999998643 3 2333333321 111 1566777777777765432 22332 24555
Q ss_pred ehhh--------hhcCCh-----HHHHHHHHHHcCCcEEEeChHHHHHHHHh--hhhccCCCCCCceEEEEeCCCceEEE
Q 008124 94 TAAV--------RAAENK-----DEFVECVREKVGFEVDVLTGEQEAKFVYM--GVLQFLPVFDRLVLSVDIGGGSTEFV 158 (577)
Q Consensus 94 TsA~--------R~A~N~-----~~fl~~i~~~tGl~i~VIsg~eEA~l~~~--gv~~~~~~~~~~~lviDIGGGStEl~ 158 (577)
.... +.+.|- -.+.+.+++++|++|.+.+.-.=|-+.-. |... ..++.+++-+|.| +--.
T Consensus 65 ~pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~~~----~~~~~~~l~~GtG-iG~g 139 (302)
T 3vov_A 65 TPGPLDFRRGVIRFAPNIPGVQDFPIRRILEEATGRPVFLENDANAAALAEHHLGAAQ----GEESSLYLTVSTG-IGGG 139 (302)
T ss_dssp ESSCEETTTTEEC---CCTTCTTCCHHHHHHHHHSSCEEEEEHHHHHHHHHHHHSTTT----TCSCEEEEEESSS-EEEE
T ss_pred ecccEeCCCCEEEcCCCCCCcCCCChHHHHHHhhCCCEEEEechHHHHHHHHHhCCCC----CCCCEEEEEECCc-eeEE
Confidence 5433 223333 24668888999999999887655544432 2211 2345899999988 4555
Q ss_pred EeeCCeEEE
Q 008124 159 IGKRGKVVF 167 (577)
Q Consensus 159 ~~~~~~~~~ 167 (577)
++-+|++..
T Consensus 140 ii~~g~l~~ 148 (302)
T 3vov_A 140 VVLGGRVLR 148 (302)
T ss_dssp EEETTEECC
T ss_pred EEECCEEee
Confidence 566777653
No 94
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=67.10 E-value=38 Score=32.91 Aligned_cols=124 Identities=14% Similarity=0.081 Sum_probs=73.6
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEEee
Q 008124 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVAT 94 (577)
Q Consensus 15 ~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vAT 94 (577)
+..||||...+++.+++. +|. ++.+.+.++. .+.+ ..++.+..+. ++..+ .-.++|.
T Consensus 6 ~lgidiggt~i~~~l~d~--~g~--il~~~~~~~~----------~~~~---~~~~~i~~~i---~~~~i---~gigi~~ 62 (292)
T 2gup_A 6 IATIDIGGTGIKFASLTP--DGK--ILDKTSISTP----------ENLE---DLLAWLDQRL---SEQDY---SGIAMSV 62 (292)
T ss_dssp EEEEEEETTEEEEEEECT--TCC--EEEEEEECCC----------SSHH---HHHHHHHHHH---TTSCC---SEEEEEE
T ss_pred EEEEEECCCEEEEEEECC--CCC--EEEEEEEeCC----------CCHH---HHHHHHHHHH---HhCCC---cEEEEEe
Confidence 688999999999999864 454 3444333321 1222 2333333332 22233 2355666
Q ss_pred hhhhh--------cCCh-----HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEee
Q 008124 95 AAVRA--------AENK-----DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGK 161 (577)
Q Consensus 95 sA~R~--------A~N~-----~~fl~~i~~~tGl~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~ 161 (577)
...-+ +.|- -.+.+.+ +++|++|.+.+.-.=|-+.-.- ... ..++.+++-+|.| +-..+.-
T Consensus 63 pG~vd~~~g~v~~~~~~~~~~~~~l~~~l-~~~~~pv~v~NDa~aaa~~e~~--~~~--~~~~~v~l~~GtG-iG~giv~ 136 (292)
T 2gup_A 63 PGAVNQETGVIDGFSAVPYIHGFSWYEAL-SSYQLPVHLENDANCVGLSELL--AHP--ELENAACVVIGTG-IGGAMII 136 (292)
T ss_dssp SSEECTTTCBEESCCSSGGGSSSBHHHHT-GGGCCCEEEEEHHHHHHHHHHH--HCT--TCSSEEEEEESSS-EEEEEEE
T ss_pred cCcccCCCCEEEecCCCCcccCCCHHHHH-HHcCCCEEEechHHHHHHHHHH--hcC--CCCeEEEEEECCc-eEEEEEE
Confidence 55422 3332 2466778 8899999998877666555432 211 2345899999998 5666777
Q ss_pred CCeEEE
Q 008124 162 RGKVVF 167 (577)
Q Consensus 162 ~~~~~~ 167 (577)
+|++..
T Consensus 137 ~G~l~~ 142 (292)
T 2gup_A 137 NGRLHR 142 (292)
T ss_dssp TTEEEC
T ss_pred CCEEEe
Confidence 887764
No 95
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=66.75 E-value=10 Score=37.05 Aligned_cols=130 Identities=13% Similarity=0.131 Sum_probs=75.2
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEEee
Q 008124 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVAT 94 (577)
Q Consensus 15 ~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vAT 94 (577)
+..||||..++++.+++. +|. ++.+.+.++. . ..+ .++.++...+.++++.. . + ...++|.
T Consensus 3 ~lgidiggt~~~~~l~d~--~g~--il~~~~~~~~--~---~~~--~~~~~~~i~~~i~~~~~---~--~---~~igi~~ 63 (289)
T 2aa4_A 3 TLAIDIGGTKLAAALIGA--DGQ--IRDRRELPTP--A---SQT--PEALRDALSALVSPLQA---H--A---QRVAIAS 63 (289)
T ss_dssp EEEEEECSSEEEEEEECT--TCC--EEEEEEEECC--S---SCC--HHHHHHHHHHHHTTTGG---G--C---SEEEEEE
T ss_pred EEEEEeCCCEEEEEEECC--CCC--EEEEEEecCC--C---CCC--HHHHHHHHHHHHHHHHh---h--C---CEEEEEe
Confidence 678999999999999864 454 4544443321 1 000 23344444444444321 1 2 2356665
Q ss_pred hhhhh--------cCCh-----HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEee
Q 008124 95 AAVRA--------AENK-----DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGK 161 (577)
Q Consensus 95 sA~R~--------A~N~-----~~fl~~i~~~tGl~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~ 161 (577)
...-+ +.|- -.+.+.+++.+|+++.+.+.-.=|-+.-.-. .-.... +.+++-+|.| +-..+..
T Consensus 64 pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaa~~e~~~--g~~~~~-~~v~l~~GtG-iG~gii~ 139 (289)
T 2aa4_A 64 TGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQA--LDGDIT-DMVFITVSTG-VGGGVVS 139 (289)
T ss_dssp SSEEETTEEECSSGGGGGGGTTCCHHHHHHHHHCSCEEEEEHHHHHHHHHHHT--SCTTCC-CEEEEEESSS-EEEEEEE
T ss_pred ccceeCCCCEEEeCCCCCcccCCChHHHHHHHHCCCEEEechHHHHHHHHHHh--CCCCCc-eEEEEEeCcc-EEEEEEE
Confidence 54422 2232 2467888889999999988655544442211 111122 6899999999 6777777
Q ss_pred CCeEEE
Q 008124 162 RGKVVF 167 (577)
Q Consensus 162 ~~~~~~ 167 (577)
+|++..
T Consensus 140 ~G~l~~ 145 (289)
T 2aa4_A 140 GCKLLT 145 (289)
T ss_dssp TTEEEC
T ss_pred CCEEee
Confidence 888764
No 96
>3m5f_A Metal dependent phosphohydrolase; CAS3, prokaryotic immune system, HD-motif, structural genomics, PSI-2; 2.30A {Methanocaldococcus jannaschii} PDB: 3s4l_A
Probab=65.48 E-value=7.3 Score=37.63 Aligned_cols=58 Identities=17% Similarity=0.115 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHhhcccccC--------------CCCchhhhHHHHHcCCCCCCCCHHH-HHHHHHHHHhccCCC
Q 008124 398 DLEYLEAACLLHNIGHFTS--------------KKGYHKQSCHIIMNGDHLYGYSTDE-IKLIALLTRFHRKKF 456 (577)
Q Consensus 398 ~r~LL~~Aa~LHdIG~~I~--------------~~~h~~Hs~yiI~ns~~l~G~s~~E-~~~iA~i~~yhrk~~ 456 (577)
.+.++.+||+|||+|+.-. ...|.--|++++...- ...+..++ ..++++.+.+|.+..
T Consensus 55 ~~~ll~~a~llHDiGKa~~~FQ~k~l~~~~~~~~~~He~lSa~fl~~~l-~~~~~~~~la~lialAI~sHH~~l 127 (244)
T 3m5f_A 55 VDEFMKILIKLHDIGKASKIYQRAIINDQEKLMGFRHELVSAYYTYHIL-LKKFGDKNLAFIGALTVMLHHEPI 127 (244)
T ss_dssp HHHHHHHHHHHTTGGGGBHHHHHHHHCTTSCCSSCCHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHTTTSCC
T ss_pred HHHHHHHHHHHcccccCCHHHHHHHHhccCCCCCCChHHHHHHHHHHHH-hhccchHHHHHHHHHHHHHhCHHH
Confidence 4578999999999998521 2355555666664331 11112223 456777666665554
No 97
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=63.14 E-value=17 Score=39.35 Aligned_cols=74 Identities=14% Similarity=0.251 Sum_probs=43.7
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeee---ccCCCcCCCCCHH-HHHHHHHHHHHHHHHHHHcCCCccc
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVIL---GRDLSSSCSISTQ-SQARSVESLLMFRDIIQSHNISRDH 88 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrL---g~~~~~~g~Ls~e-~i~r~~~~L~~f~~~~~~~~v~~~~ 88 (577)
+.+..||+|+.|+|..+++ .+|.+ +...+.+..+ ..|-. +-+++ -.+.+++++++. ++..+++..+
T Consensus 5 ~~~lgIDiGtts~ka~l~d--~~G~i--l~~~~~~~~~~~p~~g~~---eqdp~~~~~~~~~~i~~~---~~~~~~~~~~ 74 (554)
T 3l0q_A 5 SYFIGVDVGTGSARAGVFD--LQGRM--VGQASREITMFKPKADFV---EQSSENIWQAVCNAVRDA---VNQADINPIQ 74 (554)
T ss_dssp CEEEEEEECSSEEEEEEEE--TTSCE--EEEEEEECCCEEEETTEE---EECHHHHHHHHHHHHHHH---HHHHTCCGGG
T ss_pred cEEEEEEECcccEEEEEEC--CCCCE--EEEEEEecccccCCCCcc---ccCHHHHHHHHHHHHHHH---HHHcCCCHhH
Confidence 4789999999999999997 35643 4333333221 11111 22333 345555555544 4455776667
Q ss_pred EEEEeehh
Q 008124 89 TRAVATAA 96 (577)
Q Consensus 89 i~~vATsA 96 (577)
|.+|+-++
T Consensus 75 I~~Igis~ 82 (554)
T 3l0q_A 75 VKGLGFDA 82 (554)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEcC
Confidence 88888654
No 98
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=63.07 E-value=16 Score=39.21 Aligned_cols=71 Identities=15% Similarity=0.164 Sum_probs=39.0
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCC--CCCHHH-HHHHHHHHHHHHHHHHHcCCCcccE
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSC--SISTQS-QARSVESLLMFRDIIQSHNISRDHT 89 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g--~Ls~e~-i~r~~~~L~~f~~~~~~~~v~~~~i 89 (577)
+.+.+||+|+.|+|..+++. +|.+ +...+.+...- ....| +..++. .+.+++++++ +++..+ .+|
T Consensus 4 ~~~lgIDiGtts~K~~l~d~--~G~i--l~~~~~~~~~~--~p~~g~~e~dp~~~~~~~~~~i~~---~~~~~~---~~I 71 (504)
T 3ll3_A 4 KYIIGMDVGTTATKGVLYDI--NGKA--VASVSKGYPLI--QTKVGQAEEDPKLIFDAVQEIIFD---LTQKID---GKI 71 (504)
T ss_dssp EEEEEEEECSSEEEEEEEET--TSCE--EEEEEEECCCB--CSSTTCCEECHHHHHHHHHHHHHH---HHHTCS---SEE
T ss_pred CEEEEEEecCCceEEEEEcC--CCCE--EEEEEeeccee--cCCCCcEEECHHHHHHHHHHHHHH---HHHhCC---CCe
Confidence 57899999999999999974 4543 44444433221 11222 223433 3334445544 344434 357
Q ss_pred EEEeeh
Q 008124 90 RAVATA 95 (577)
Q Consensus 90 ~~vATs 95 (577)
.+|+-+
T Consensus 72 ~~Igis 77 (504)
T 3ll3_A 72 AAISWS 77 (504)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 777643
No 99
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=62.47 E-value=26 Score=35.90 Aligned_cols=133 Identities=17% Similarity=0.151 Sum_probs=72.0
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEee-eeeeeeccCCCcCCCCCHH-HHHHHHHHHHHHHHHHHHc---CCCcc
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTL-KQPVILGRDLSSSCSISTQ-SQARSVESLLMFRDIIQSH---NISRD 87 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~-k~~vrLg~~~~~~g~Ls~e-~i~r~~~~L~~f~~~~~~~---~v~~~ 87 (577)
..+..||||.+.+++.+++ . | +++.+. +.++. . . +++ .++...+.+. .++++ .+
T Consensus 9 ~~~lgiDIGgt~i~~~l~d-~--G--~il~~~~~~~~~--~------~-~~~~~l~~i~~~~~----~i~~~~~~~i--- 67 (366)
T 3mcp_A 9 RIVMTLDAGGTNFVFSAIQ-G--G--KEIADPVVLPAC--A------D-CLDKCLGNLVEGFK----AIQAGLPEAP--- 67 (366)
T ss_dssp CEEEEEECSSSEEEEEEEE-T--T--EECSCCEEEECC--T------T-CHHHHHHHHHHHHH----HHHTTCSSCC---
T ss_pred CEEEEEEECcceEEEEEEE-C--C--EEEEEEEEEECC--C------C-CHHHHHHHHHHHHH----HHHHHhhcCC---
Confidence 5778999999999999997 4 4 344433 33321 1 1 232 3333333111 22222 22
Q ss_pred cEEEEeehh--------hhhcCCh------HHHHHHHHHHcCCcEEEeChHHHHHHHH--hhhh----cc-----CCCCC
Q 008124 88 HTRAVATAA--------VRAAENK------DEFVECVREKVGFEVDVLTGEQEAKFVY--MGVL----QF-----LPVFD 142 (577)
Q Consensus 88 ~i~~vATsA--------~R~A~N~------~~fl~~i~~~tGl~i~VIsg~eEA~l~~--~gv~----~~-----~~~~~ 142 (577)
.-.+||... +..+.|- -.+.+.+++++|++|.+.+.-.=+-+.- .|.. .. -....
T Consensus 68 ~gIGIavPG~Vd~~~G~i~~~~nlp~w~~~~~l~~~L~~~~g~PV~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~~ 147 (366)
T 3mcp_A 68 VAISFAFPGPADYQAGIIGDLPNFPSFRGGVALGPFLEDIFGIPVFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRY 147 (366)
T ss_dssp CEEEEECCSSEETTTTEECCCTTCGGGTTCBCHHHHHHHHHCSCEEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCC
T ss_pred eEEEEEecceEeCCCCEEEeCCCcccccCCCCHHHHHHHHHCCCEEEechhhHHHHHHHHhCCCcccccccccccccCCC
Confidence 224455432 3334553 2456788999999999998766555442 2300 00 11123
Q ss_pred CceEEEEeCCCceEEEEeeCCeEEE
Q 008124 143 RLVLSVDIGGGSTEFVIGKRGKVVF 167 (577)
Q Consensus 143 ~~~lviDIGGGStEl~~~~~~~~~~ 167 (577)
++.+++-+|.| +--.++-+|++..
T Consensus 148 ~~~v~l~lGtG-IG~givi~G~l~~ 171 (366)
T 3mcp_A 148 KNLLGVTLGTG-FGAGVVIDGELLR 171 (366)
T ss_dssp CEEEEEEESSS-EEEEEEETTEECC
T ss_pred CcEEEEEECCc-ceEEEEECCEEec
Confidence 45788888876 4444555776653
No 100
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=62.13 E-value=17 Score=38.72 Aligned_cols=73 Identities=10% Similarity=0.131 Sum_probs=41.0
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCC--CHH-HHHHHHHHHHHHHHHHHHcCCCcccEE
Q 008124 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSI--STQ-SQARSVESLLMFRDIIQSHNISRDHTR 90 (577)
Q Consensus 14 ~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~L--s~e-~i~r~~~~L~~f~~~~~~~~v~~~~i~ 90 (577)
.+.+||||+.|+|..+++. +|. ++.+.+.+...- ....|.. .++ -.+.+++++++. ++..+++..+|.
T Consensus 3 ~~lgiDiGtT~~k~~l~d~--~g~--i~~~~~~~~~~~--~p~~g~~e~d~~~~~~~i~~~i~~~---~~~~~~~~~~i~ 73 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTL--EGR--PVAVAKREFRQL--YPKPGWVEHDPLEIWETTLWAAREV---LRRAGAEAGEVL 73 (495)
T ss_dssp CEEEEEECSSEEEEEEECT--TSC--EEEEEEEECCEE--CSSTTCCEECHHHHHHHHHHHHHHH---HHHTTCCGGGCC
T ss_pred EEEEEeeCCcceEEEEECC--CCC--EEEEEEEeecee--cCCCCcEeeCHHHHHHHHHHHHHHH---HHhcCCCcccEE
Confidence 4789999999999999963 454 454444443221 1122222 333 344555555544 445565545566
Q ss_pred EEeeh
Q 008124 91 AVATA 95 (577)
Q Consensus 91 ~vATs 95 (577)
+|+-+
T Consensus 74 ~Igis 78 (495)
T 2dpn_A 74 ALGIT 78 (495)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66543
No 101
>3kq5_A Hypothetical cytosolic protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Coxiella burnetii}
Probab=60.19 E-value=6.4 Score=40.59 Aligned_cols=41 Identities=15% Similarity=0.063 Sum_probs=27.9
Q ss_pred hhHHH-HHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHHhhccccc
Q 008124 361 KAGAQ-CASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT 415 (577)
Q Consensus 361 ~ha~~-V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~~I 415 (577)
+|.-. |+.+|+.+-+. +.. ..+-++.++-+||+|||||+-+
T Consensus 78 eHtLerVa~~A~~l~~~----YP~----------~~~~Er~~l~~aALLHDIGKl~ 119 (393)
T 3kq5_A 78 NEGLLRGVNSLNHYIQN----HPE----------ATPLERYALFSAGLLLEVAHAV 119 (393)
T ss_dssp HHHHHHHHHHHHHHHHH----CTT----------CCHHHHHHHHHHHHHTTTTHHH
T ss_pred HHHHHHHHHHHHHHHHh----CCC----------CCchHHHHHHHHHHHhccchhe
Confidence 56666 77888875443 311 1112378999999999999884
No 102
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=59.85 E-value=12 Score=40.92 Aligned_cols=78 Identities=15% Similarity=0.157 Sum_probs=41.6
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeec---cCCCc------CC--CCCHHHH-HHHHHHHHHHHHHHH
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILG---RDLSS------SC--SISTQSQ-ARSVESLLMFRDIIQ 80 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg---~~~~~------~g--~Ls~e~i-~r~~~~L~~f~~~~~ 80 (577)
+.+.+||+|+.|+|..+++.. +|++ +.+...+...+ ..... .| .-+++.+ +.++++++.. ++
T Consensus 5 ~~~lgIDiGTts~Ka~l~d~~-~G~i--~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~---l~ 78 (572)
T 3jvp_A 5 KYTIGVDYGTESGRAVLIDLS-NGQE--LADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAV---MK 78 (572)
T ss_dssp CEEEEEEECSSEEEEEEEETT-TCCE--EEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHH---HH
T ss_pred CEEEEEecCCcceEEEEEECC-CCeE--EEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHHH---HH
Confidence 468899999999999999752 4643 43333332210 00000 11 2244444 5555666554 44
Q ss_pred HcCCCcccEEEEeehh
Q 008124 81 SHNISRDHTRAVATAA 96 (577)
Q Consensus 81 ~~~v~~~~i~~vATsA 96 (577)
..+++..+|.+|+-++
T Consensus 79 ~~~~~~~~I~~Igis~ 94 (572)
T 3jvp_A 79 ESGVDADDVIGIGVDF 94 (572)
T ss_dssp C---CCSCEEEEEEEE
T ss_pred HcCCChhHEEEEEEec
Confidence 4466556788877433
No 103
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=59.33 E-value=1.2e+02 Score=28.78 Aligned_cols=136 Identities=17% Similarity=0.200 Sum_probs=78.5
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEE-eeeeeeeeccCCCcCCCCC-HHHHHHHHHHHHHHHHHHHHcC-CCcccEE
Q 008124 14 LFASIDMGTSSFKLLIIRAYPNGKFLTID-TLKQPVILGRDLSSSCSIS-TQSQARSVESLLMFRDIIQSHN-ISRDHTR 90 (577)
Q Consensus 14 ~~AvIDIGSNSirL~I~~~~~~~~~~~l~-~~k~~vrLg~~~~~~g~Ls-~e~i~r~~~~L~~f~~~~~~~~-v~~~~i~ 90 (577)
.+..||||.+++++.+++.. +|. ++. +.+.++. . ..+ ++.++...+.++++.+. .+ .+.....
T Consensus 13 ~~lgidiggt~i~~~l~dl~-~g~--i~~~~~~~~~~--~------~~~~~~~~~~i~~~i~~~~~~---~~~~~~~~~i 78 (267)
T 1woq_A 13 PLIGIDIGGTGIKGGIVDLK-KGK--LLGERFRVPTP--Q------PATPESVAEAVALVVAELSAR---PEAPAAGSPV 78 (267)
T ss_dssp CEEEEEECSSEEEEEEEETT-TTE--EEEEEEEEECC--S------SCCHHHHHHHHHHHHHHHHTS---TTCCCTTCCE
T ss_pred EEEEEEECCCEEEEEEEECC-CCe--EEEEEEecCCC--c------cCCHHHHHHHHHHHHHHHHHh---ccccCccceE
Confidence 47889999999999999764 243 332 2222211 0 112 34455566666665431 11 1111224
Q ss_pred EEeehhh------hhcCCh------HHHHHHHHHHcCCcEEEeChHHHHHHHHh--hhhccCCCCCCceEEEEeCCCceE
Q 008124 91 AVATAAV------RAAENK------DEFVECVREKVGFEVDVLTGEQEAKFVYM--GVLQFLPVFDRLVLSVDIGGGSTE 156 (577)
Q Consensus 91 ~vATsA~------R~A~N~------~~fl~~i~~~tGl~i~VIsg~eEA~l~~~--gv~~~~~~~~~~~lviDIGGGStE 156 (577)
++|.... ..+.|- -.+.+.+++++|++|.+.+.-.=|-+.-. |.... .+++.+++-+|.| +-
T Consensus 79 gi~~pG~v~~g~v~~~~~l~~~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~~g~~~~---~~~~~~~l~~GtG-IG 154 (267)
T 1woq_A 79 GVTFPGIIQHGVVHSAANVDKSWLNTDIDALLTARLGRPVEVINDADAAGLAEARYGAGAG---VKGTVLVITLGTG-IG 154 (267)
T ss_dssp EEEESSCEETTEECCCTTSCGGGTTCBHHHHHHHHHTSCEEEEEHHHHHHHHHHHHSTTTT---CCSEEEEEEESSS-EE
T ss_pred EEEccceEcCCEEEeCCCCCCCCCCCCHHHHHHHHHCCCEEEeehhHHHHHHHHHhCCCCC---CCCcEEEEEECcc-eE
Confidence 5665432 334442 34668888999999999887766665532 22211 1123678899987 78
Q ss_pred EEEeeCCeEEE
Q 008124 157 FVIGKRGKVVF 167 (577)
Q Consensus 157 l~~~~~~~~~~ 167 (577)
..++-+|++..
T Consensus 155 ~giv~~G~l~~ 165 (267)
T 1woq_A 155 SAFIFDGKLVP 165 (267)
T ss_dssp EEEEETTEEET
T ss_pred EEEEECCEEcc
Confidence 77788887654
No 104
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=58.97 E-value=32 Score=36.64 Aligned_cols=75 Identities=16% Similarity=0.154 Sum_probs=43.7
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCC--CH-HHHHHHHHHHHHHHHHHHHcCCCcccEE
Q 008124 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSI--ST-QSQARSVESLLMFRDIIQSHNISRDHTR 90 (577)
Q Consensus 14 ~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~L--s~-e~i~r~~~~L~~f~~~~~~~~v~~~~i~ 90 (577)
.+.+||+|+.|+|..+++. +|. ++.+.+.+...- ....|.. .+ +-.+.+++++++ +++..+++..+|.
T Consensus 3 ~~lgiDiGtts~k~~l~d~--~G~--i~~~~~~~~~~~--~p~~g~~e~d~~~~~~~i~~~i~~---~~~~~~~~~~~i~ 73 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDH--SGE--IYSTGQLEHDQI--FPRAGWVEHNPEQIWNNVREVVGL---ALTRGNLTHEDIA 73 (504)
T ss_dssp EEEEEEECSSEEEEEEECT--TSC--EEEEEEEECCCB--CSSTTCCEECHHHHHHHHHHHHHH---HHHHTTCCGGGEE
T ss_pred EEEEEecCCcceEEEEECC--CCC--EEEEEEEeccee--cCCCCceeECHHHHHHHHHHHHHH---HHHHcCCCcccEE
Confidence 5789999999999999964 454 454444443221 1222322 33 334555555554 4455666555788
Q ss_pred EEeehhh
Q 008124 91 AVATAAV 97 (577)
Q Consensus 91 ~vATsA~ 97 (577)
+|+-++-
T Consensus 74 ~Igis~~ 80 (504)
T 2d4w_A 74 AVGITNQ 80 (504)
T ss_dssp EEEEEEC
T ss_pred EEEEeCC
Confidence 7875444
No 105
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=58.92 E-value=43 Score=32.70 Aligned_cols=131 Identities=10% Similarity=0.113 Sum_probs=68.8
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEEee
Q 008124 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVAT 94 (577)
Q Consensus 15 ~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vAT 94 (577)
+-+||||-.++++-+++ ++ +++...+.. -. ..-+.+.. ...+.++++.++++..++..++=
T Consensus 2 lL~IDIGNT~ik~gl~~---~~--~l~~~~r~~----T~----~~~t~de~------~~~l~~ll~~~~~~~~~i~~iiI 62 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFE---EG--ELRQHWRME----TD----RHKTEDEY------GMLVKQLLEHEGLSFEDVKGIIV 62 (268)
T ss_dssp EEEEEECSSEEEEEEEE---TT--EEEEEEEEE----CC----TTCCHHHH------HHHHHHHHHHTTCCGGGCCEEEE
T ss_pred EEEEEECcCcEEEEEEE---CC--EEEEEEEec----CC----CcCCHHHH------HHHHHHHHHHcCCCcccCcEEEE
Confidence 45899999999999986 23 234333222 11 11223322 22334555666654333333333
Q ss_pred hhhhhcCChHHHHHHHHHHcCCcEEEeChHHHH----------------HHHHhhhhccCCCCCCceEEEEeCCCceEEE
Q 008124 95 AAVRAAENKDEFVECVREKVGFEVDVLTGEQEA----------------KFVYMGVLQFLPVFDRLVLSVDIGGGSTEFV 158 (577)
Q Consensus 95 sA~R~A~N~~~fl~~i~~~tGl~i~VIsg~eEA----------------~l~~~gv~~~~~~~~~~~lviDIGGGStEl~ 158 (577)
|.+.- .-...+.+.+++..+.++.+++..... -....|+....+ .+.+|+|.|...|==.
T Consensus 63 SSVvp-~~~~~l~~~~~~~~~~~~~~v~~~~~~gl~~~y~~P~~lG~DR~~~~vaA~~~~~---~~~iVVD~GTAtT~d~ 138 (268)
T 2h3g_X 63 SSVVP-PIMFALERMCEKYFKIKPLVVGPGIKTGLNIKYENPREVGADRIVNAVAGIHLYG---SPLIIVDFGTATTYCY 138 (268)
T ss_dssp EESCH-HHHHHHHHHHHHHTCCCCEECSTTCCCCCEECSSCGGGSCHHHHHHHHHHHHHHC---SSEEEEEESSEEEEEE
T ss_pred EccCh-hHHHHHHHHHHHHhCCCeEEEcCCCCCCccccCCChhhcCHHHHHHHHHHHHhcC---CCEEEEECCCceEEEE
Confidence 33321 122345556667778888887422110 122333333222 4689999999988544
Q ss_pred EeeCCeEEEE
Q 008124 159 IGKRGKVVFC 168 (577)
Q Consensus 159 ~~~~~~~~~~ 168 (577)
+-.+|...-.
T Consensus 139 v~~~g~~lGG 148 (268)
T 2h3g_X 139 INEEKHYMGG 148 (268)
T ss_dssp ECTTSEEEEE
T ss_pred ECCCCcEEEE
Confidence 4456665544
No 106
>2ibn_A Inositol oxygenase; reductase, DIIRON, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: MSE I1N; 1.50A {Homo sapiens} SCOP: a.211.1.4
Probab=57.90 E-value=4 Score=39.22 Aligned_cols=25 Identities=20% Similarity=0.395 Sum_probs=20.9
Q ss_pred HHHHHHHHHhhcccccCCCCchhhh
Q 008124 400 EYLEAACLLHNIGHFTSKKGYHKQS 424 (577)
Q Consensus 400 ~LL~~Aa~LHdIG~~I~~~~h~~Hs 424 (577)
..+..||+|||+|.-+.+.++.+|.
T Consensus 79 dw~~laaLlHDLGkll~~~~~~qW~ 103 (250)
T 2ibn_A 79 DWFHLVGLLHDLGKVLALFGEPQWA 103 (250)
T ss_dssp HHHHHHHHHTTGGGHHHHTTCCGGG
T ss_pred hHHHHHHHHhccHhhhcccCCcchh
Confidence 5799999999999988777776664
No 107
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=57.20 E-value=27 Score=37.28 Aligned_cols=75 Identities=8% Similarity=-0.055 Sum_probs=42.1
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCH-HHHHHHHHHHHHHHHHHHHc--CCCcc
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--IST-QSQARSVESLLMFRDIIQSH--NISRD 87 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~--Ls~-e~i~r~~~~L~~f~~~~~~~--~v~~~ 87 (577)
+.+.+||||+.++|..+++. +|. ++.+.+.+...- ....|. -++ +-.+.+++++++..+ +. +++..
T Consensus 4 ~~~lgIDiGtT~~k~~l~d~--~g~--i~~~~~~~~~~~--~~~~g~~e~d~~~~~~~i~~~i~~~~~---~~~~~~~~~ 74 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYDE--ELN--IVHSNNLNHEQK--CLKPGWYEHDPIEIMTNLYNLMNEGIK---VLKDKYTSV 74 (503)
T ss_dssp EEEEEEEECSSEEEEEEEET--TCC--EEEEEEEECCCB--CCSTTCCEECHHHHHHHHHHHHHHHHH---HHHHHSSSC
T ss_pred cEEEEEEeCCcceEEEEECC--CCC--EEEEEEEeeeee--cCCCCcEEECHHHHHHHHHHHHHHHHH---HhhcCCCcc
Confidence 36789999999999999974 454 454444443221 112222 223 334555566665433 32 34434
Q ss_pred cEEEEeehh
Q 008124 88 HTRAVATAA 96 (577)
Q Consensus 88 ~i~~vATsA 96 (577)
+|.+|+-++
T Consensus 75 ~i~~Igis~ 83 (503)
T 2w40_A 75 IIKCIGITN 83 (503)
T ss_dssp EEEEEEEEE
T ss_pred ceEEEEEcC
Confidence 677776443
No 108
>2e5n_A RNA polymerase II elongation factor ELL2; ELL_N2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.44 E-value=14 Score=30.61 Aligned_cols=53 Identities=17% Similarity=0.215 Sum_probs=37.6
Q ss_pred cCcchHHHHHHHHHHhhccccc--CCCCchhhhHHHHHcCCCCCCCCHHHHHHHHHHH
Q 008124 394 FEDKDLEYLEAACLLHNIGHFT--SKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLT 449 (577)
Q Consensus 394 ~~~~~r~LL~~Aa~LHdIG~~I--~~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~ 449 (577)
++++++..| -++|.+|+..= +..++-+..+|-=.+-+ ++|||..|++++-.+.
T Consensus 41 l~~~d~~~l--~~iL~eVa~~~~~~~~y~Lk~~~~~eVq~d-Wp~Yte~erq~v~r~L 95 (100)
T 2e5n_A 41 VNQKDKNSL--GAILQQVANLNSKDLSYTLKDYVFKELQRD-WPGYSEIDRRSLESVL 95 (100)
T ss_dssp CCHHHHHHH--HHHHHHHEEEETTTTEEEECSTHHHHSCTT-CTTCCTTHHHHHHHHH
T ss_pred CCHHHHHHH--HHHHHHHHhcCCcCCeeehhHHHHHHhccC-CCCCCHHHHHHHHHHH
Confidence 344454444 56999999983 33444555577777888 9999999999887754
No 109
>3aql_A Poly(A) polymerase; transferase/RNA, ATP-binding, nucleotide-binding, RNA-bindin transferase, nucleotidyltransferase, ATP binding, A-phospho; 3.00A {Escherichia coli} PDB: 3aqn_A* 3aqk_A 3aqm_A
Probab=56.22 E-value=8.4 Score=40.41 Aligned_cols=54 Identities=4% Similarity=-0.043 Sum_probs=39.0
Q ss_pred HHHHHHHHHh-hcccccC-------C---CCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhcc
Q 008124 400 EYLEAACLLH-NIGHFTS-------K---KGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHR 453 (577)
Q Consensus 400 ~LL~~Aa~LH-dIG~~I~-------~---~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~~yhr 453 (577)
.+|.+||+|| |||.... . ..|.+-+..++..--...|++.++...++.++..|.
T Consensus 287 ~~L~lAALLH~di~K~~~~~~~~~G~~~~~~h~~~ga~~a~~~~~rl~l~~r~~~~v~~lv~lq~ 351 (415)
T 3aql_A 287 PAFLFAAMFWYPLLETAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQL 351 (415)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhHhcCcchhhhhhhhhhccCCCchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 5788999999 9988521 1 234555566664332368999999999999998773
No 110
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=55.29 E-value=52 Score=32.03 Aligned_cols=126 Identities=13% Similarity=0.081 Sum_probs=67.6
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeee-eeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEEe
Q 008124 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPV-ILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (577)
Q Consensus 15 ~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~v-rLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (577)
+..||+|..++|..+++ + |. ++.+.+.+. .... .+ .++.+++..+++++.. ....+ .-.+++
T Consensus 2 ~lgiDiGGT~i~~~l~d-~--g~--il~~~~~~~~~~~~----~~--~~~~~~~i~~~i~~~~---~~~~i---~~igig 64 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVL-N--GA--VIKRLGTKGINPFF----QS--EEEIQQKLTASLLPQL---PEGKF---NAVYFY 64 (291)
T ss_dssp --CEECCTTCEEEEEEC-S--SS--EEEEEEECCCCTTT----SC--STTTTTTTTC-------------------CEEE
T ss_pred EEEEEeccccEEEEEEc-C--Ce--EEEEEECCCCCccc----CC--HHHHHHHHHHHHHHhc---Ccccc---cEEEEE
Confidence 46899999999999986 4 43 344433221 1100 00 0111222222222221 11123 124566
Q ss_pred ehhhhhcCChHHHHHHHHHHcCC--cEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEE
Q 008124 94 TAAVRAAENKDEFVECVREKVGF--EVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVV 166 (577)
Q Consensus 94 TsA~R~A~N~~~fl~~i~~~tGl--~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~ 166 (577)
+..+- ..++..+.+.+++.++. ++.|-+.-.=|.+.-. . .++++++=+|.||.-..+..+|++.
T Consensus 65 ~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~------g--~~~~v~v~~GTGi~g~gi~~~G~~~ 130 (291)
T 1zxo_A 65 GAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC------G--QKAGIACILGTGSNSCFYNGKEIVS 130 (291)
T ss_dssp CTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT------T--TSCBEEEEESSSEEEEEECSSSEEE
T ss_pred cCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc------C--CCCcEEEEeCCChheEEECCCCcEE
Confidence 76653 45566788889999994 9999888766555432 2 2346777799999655555567664
No 111
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=52.65 E-value=12 Score=33.38 Aligned_cols=86 Identities=16% Similarity=0.228 Sum_probs=56.8
Q ss_pred eEEEEEecccceEEEEEEEeCCCC-EEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEE
Q 008124 14 LFASIDMGTSSFKLLIIRAYPNGK-FLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (577)
Q Consensus 14 ~~AvIDIGSNSirL~I~~~~~~~~-~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (577)
++-.||.|+-.+-+.|.+. .|. ..++... +-.. .|.-..++.+.+++++|++ ...+|
T Consensus 4 riLGiDpG~~riGvAv~d~--~g~~a~p~~~I----~~~~-------------~r~~~~~~~l~~li~~~~~---~~ivV 61 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDE--MGWTAQGIETI----KINE-------------AEGDYGLSRLSELIKDYTI---DKIVL 61 (150)
T ss_dssp EEEEEEECSSEEEEEEECT--TSSSEEEEEEE----ECBG-------------GGTBCCHHHHHHHHTTSEE---EEEEE
T ss_pred EEEEEEccCCEEEEEEEEC--CCCEEeeEEEE----EcCC-------------cchHHHHHHHHHHHHHcCC---CEEEE
Confidence 4789999999999998864 343 2222222 1111 0222446677788888887 35678
Q ss_pred e-------ehhhhhcCChHHHHHHHHHHcCCcEEEeC
Q 008124 93 A-------TAAVRAAENKDEFVECVREKVGFEVDVLT 122 (577)
Q Consensus 93 A-------TsA~R~A~N~~~fl~~i~~~tGl~i~VIs 122 (577)
+ |+ -+.+.-...|+.++..+.+++|...|
T Consensus 62 GlP~~~nGt~-~~~~~~ar~f~~~L~~~~~lpV~~vD 97 (150)
T 1vhx_A 62 GFPKNMNGTV-GPRGEASQTFAKVLETTYNVPVVLWD 97 (150)
T ss_dssp ECCCCBTTBC-CHHHHHHHHHHHHHHHHHCSCEEEEC
T ss_pred eeeecCCcch-hHHHHHHHHHHHHHHHhhCCCEEEec
Confidence 7 33 35555567899999888899998854
No 112
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=51.67 E-value=19 Score=38.34 Aligned_cols=31 Identities=23% Similarity=0.388 Sum_probs=21.6
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeee
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQP 47 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~ 47 (577)
+.+.+||+|+.|+|..+++ .+|++ +...+.+
T Consensus 6 ~~~lgIDiGTts~Ka~l~d--~~G~i--~~~~~~~ 36 (482)
T 3h6e_A 6 GATIVIDLGKTLSKVSLWD--LDGRM--LDRQVRP 36 (482)
T ss_dssp --CEEEEECSSEEEEEEEC--TTSCE--EEEEEEE
T ss_pred ceEEEEEcCCCCeEEEEEE--CCCcE--EEEEEec
Confidence 4678999999999999997 45654 4444433
No 113
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=51.25 E-value=1.5e+02 Score=28.72 Aligned_cols=127 Identities=18% Similarity=0.213 Sum_probs=71.6
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHc-CCCcccEEEE
Q 008124 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSH-NISRDHTRAV 92 (577)
Q Consensus 14 ~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~-~v~~~~i~~v 92 (577)
.+..||||.+++++.+++. +|. ++.+.+.++. . -++ +..++.+..+ +++. .+ .-.+|
T Consensus 5 ~~lgiDiGgt~i~~~l~d~--~G~--il~~~~~~~~------~---~~~---~~~~~~i~~~---~~~~~~i---~gigi 62 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLP--HGE--IILTKSAEIS------G---SDG---DQILAEMKVF---LAENTDV---TGIAV 62 (297)
T ss_dssp CEEEEEECSSEEEEEEECT--TSC--EEEEEEEECS------T---TCH---HHHHHHHHHH---HHTCTTC---CEEEE
T ss_pred EEEEEEeCCCeEEEEEECC--CCC--EEEEEEecCC------C---CCH---HHHHHHHHHH---HhhcCCe---eEEEE
Confidence 3789999999999999864 454 3444443321 1 012 2233333332 2222 22 22445
Q ss_pred eehhh--------hhcCCh-----HHHHHHHHHHcCCcEEEeChHHHHHHHH--hhhhccCCCCCCceEEEEeCCCceEE
Q 008124 93 ATAAV--------RAAENK-----DEFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVLSVDIGGGSTEF 157 (577)
Q Consensus 93 ATsA~--------R~A~N~-----~~fl~~i~~~tGl~i~VIsg~eEA~l~~--~gv~~~~~~~~~~~lviDIGGGStEl 157 (577)
|.... ..+.|- -.+.+.+++++|++|.+.+.-.=+-+.- +|... ..++.+++-+|.| +--
T Consensus 63 ~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~pV~v~NDa~aaal~E~~~g~~~----~~~~~~~l~~GtG-iG~ 137 (297)
T 4htl_A 63 SAPGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETGLPVAIENDANCALLAEKWLGKGQ----DLDDFLCLTIGTG-IGG 137 (297)
T ss_dssp EESSEECTTTCEEEECTTCGGGTTEEHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTT----TCSSEEEEEESSS-EEE
T ss_pred ecCcceeCCCCEEEeCCCCCCccCCCHHHHHHHHHCcCEEEecHHHHHHHHHHHhCCCC----CCCcEEEEEECcc-eEE
Confidence 54332 223332 2467888999999999988755544432 23222 2245889999987 555
Q ss_pred EEeeCCeEEE
Q 008124 158 VIGKRGKVVF 167 (577)
Q Consensus 158 ~~~~~~~~~~ 167 (577)
.++-+|++..
T Consensus 138 giv~~G~l~~ 147 (297)
T 4htl_A 138 GIFSNGELVR 147 (297)
T ss_dssp EEEETTEECC
T ss_pred EEEECCEEEe
Confidence 5666777754
No 114
>2doa_A RNA polymerase II elongation factor ELL; C19ORF17, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.5.81
Probab=51.01 E-value=13 Score=31.07 Aligned_cols=54 Identities=17% Similarity=0.215 Sum_probs=38.7
Q ss_pred cCcchHHHHHHHHHHhhcccc--cCCCCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHH
Q 008124 394 FEDKDLEYLEAACLLHNIGHF--TSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTR 450 (577)
Q Consensus 394 ~~~~~r~LL~~Aa~LHdIG~~--I~~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~~ 450 (577)
+++.++..| -++|.+|+.. =+...+-+..+|-=.+-+ ++|+|..||.++-.+..
T Consensus 40 l~~~d~~~l--~~iL~eVA~~~~~~~~y~Lk~~~y~eVq~d-Wp~Yte~erq~v~r~l~ 95 (104)
T 2doa_A 40 LTQADKDAL--DGLLQQVANMSAKDGTCTLQDCMYKDVQKD-WPGYSEGDQQLLKRVLV 95 (104)
T ss_dssp CCHHHHHHH--HHHHHHSSEECSSSCEEECCSSGGGGCCSC-CTTCCSHHHHHHHHHHH
T ss_pred CCHHHHHHH--HHHHHHHHhcCCcCCeeeehHHHHHHhcCC-CCCCCHHHHHHHHHHHH
Confidence 344454444 5699999988 344455555677777888 99999999999887654
No 115
>2cqz_A 177AA long hypothetical protein; hypothetical proteins, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.60A {Pyrococcus horikoshii}
Probab=49.10 E-value=18 Score=32.93 Aligned_cols=41 Identities=17% Similarity=0.126 Sum_probs=26.9
Q ss_pred hhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHHhhcccc
Q 008124 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHF 414 (577)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~~ 414 (577)
.|+-+|+.+|..|-+.++. .+. + -+...+..+|+|||++-.
T Consensus 35 eHs~rVa~~A~~la~~~~~-~~~---------~---~d~~~v~~~aLlHD~~E~ 75 (177)
T 2cqz_A 35 DHSFGVAFITLVLADVLEK-RGK---------R---IDVEKALKMAIVHDLAEA 75 (177)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TTC---------C---CCHHHHHHHHHHTTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHH-cCC---------C---CCHHHHHHHHHHhchHHH
Confidence 7999999999887554321 111 1 123445689999999744
No 116
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=47.74 E-value=74 Score=27.72 Aligned_cols=86 Identities=15% Similarity=0.246 Sum_probs=54.9
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEEe
Q 008124 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (577)
Q Consensus 14 ~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (577)
.+-+||.|+-.|=+.|.+.. ...-.++...+.. ... ..+..+.+++++|++. ..+||
T Consensus 4 ~iLglD~G~kriGvAvsd~~-~~~A~pl~ti~~~-----~~~--------------~~~~~l~~li~e~~v~---~iVvG 60 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRI-TGTARPLPAIKAQ-----DGT--------------PDWNIIERLLKEWQPD---EIIVG 60 (138)
T ss_dssp EEEEEECCSSEEEEEEEETT-TTEEEEEEEEEEE-----TTE--------------ECHHHHHHHHHHHCCS---EEEEE
T ss_pred eEEEEEeCCCEEEEEEEcCC-CCEEeeEEEEEcC-----Ccc--------------hHHHHHHHHHHHcCCC---EEEEe
Confidence 57899999999988888642 2222344333221 100 1245667778888884 45676
Q ss_pred -------ehhhhhcCChHHHHHHHHHHcCCcEEEeCh
Q 008124 94 -------TAAVRAAENKDEFVECVREKVGFEVDVLTG 123 (577)
Q Consensus 94 -------TsA~R~A~N~~~fl~~i~~~tGl~i~VIsg 123 (577)
|..- .|.-...|.++++.++|++|...+.
T Consensus 61 lP~~mdGt~~~-~~~~~~~f~~~L~~~~~lpV~~~DE 96 (138)
T 1nu0_A 61 LPLNMDGTEQP-LTARARKFANRIHGRFGVEVKLHDE 96 (138)
T ss_dssp EEECTTSCBCH-HHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred cccCCCcCcCH-HHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 3321 2334478999999999999988774
No 117
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=44.45 E-value=62 Score=32.22 Aligned_cols=59 Identities=10% Similarity=0.088 Sum_probs=42.6
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeee-eeeeccCCCcCCCCCHHHHHHHHHHHHH
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQ-PVILGRDLSSSCSISTQSQARSVESLLM 74 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~-~vrLg~~~~~~g~Ls~e~i~r~~~~L~~ 74 (577)
....+||||.-|+-+.+++ ++.+....+..- .|||-+..+.++..+++.++++.+.++.
T Consensus 131 ~~~lviDIGGGStEl~~~~---~~~~~~~~Sl~lG~vrl~e~f~~~~~~~~~~~~~~~~~i~~ 190 (315)
T 3mdq_A 131 HISLAMDIGGGSVEFIIGN---KNEILWKQSFEIGGQRLIDRFHVHDPMREDDRVMMHNYFDE 190 (315)
T ss_dssp CCEEEEEECSSCEEEEEEC---SSCEEEEEEESCCHHHHHHHSCCCSSCCHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCceEEEEEE---CCeEeeeEEEechhhHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 4578999999999999984 344433333332 4588888888888999888877766553
No 118
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=42.58 E-value=60 Score=34.74 Aligned_cols=25 Identities=36% Similarity=0.482 Sum_probs=20.2
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCE
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKF 38 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~ 38 (577)
+.+..||+|+.|+|..+++.. +|++
T Consensus 5 ~~~lgIDiGtts~ka~l~d~~-~G~i 29 (515)
T 3i8b_A 5 TLVAGVDTSTQSCKVRVTDAE-TGEL 29 (515)
T ss_dssp CEEEEEEECSSEEEEEEEETT-TCCE
T ss_pred cEEEEEEeccccEEEEEEECC-CCeE
Confidence 468999999999999999742 4643
No 119
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=42.22 E-value=1.6e+02 Score=31.16 Aligned_cols=60 Identities=23% Similarity=0.262 Sum_probs=41.0
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHH
Q 008124 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDI 78 (577)
Q Consensus 14 ~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~ 78 (577)
.|-+||+|-.++|..+++...++.+.++ ..+. ++-..+.. |. .++-.+-..+++..|.+.
T Consensus 81 ~~LalDlGGTn~Rv~~V~l~g~~~~~~~-~~~~--~Ip~~~~~-~~-~~~lfd~Ia~~i~~fl~~ 140 (485)
T 3o8m_A 81 DFLALDLGGTNLRVVLVKLGGNHDFDTT-QNKY--RLPDHLRT-GT-SEQLWSFIAKCLKEFVDE 140 (485)
T ss_dssp EEEEEEESSSEEEEEEEEEESSSCEEEE-EEEE--ECCTTGGG-SB-HHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCeEEEEEEEECCCCceEEE-EEEE--ecCchhcc-CC-HHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999865566654 2222 33333221 11 367788888888888764
No 120
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=36.53 E-value=27 Score=35.28 Aligned_cols=130 Identities=23% Similarity=0.292 Sum_probs=57.3
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEEee
Q 008124 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVAT 94 (577)
Q Consensus 15 ~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vAT 94 (577)
+-.+|||.=.++... .+++|.+ .+ ...++-|=++. +++-++|+.+.+. ++ ..-++=|
T Consensus 2 iiG~DIGGAn~K~a~--~~~~g~~-~~--~~~~~PlW~~~-----------~~L~~~l~~~~~~-----~~--~~avtMT 58 (334)
T 3cet_A 2 ILGIDIGGANTKITE--LHENGEF-KV--HHLYFPMWKNN-----------DKLAEVLKTYSND-----VS--HVALVTT 58 (334)
T ss_dssp EEEEEEC--CEEEEE--ECSTTCC-EE--EEC-------------------------------------CC--EEEEEEC
T ss_pred eeEEEecccceeeee--ecCCCce-EE--EEEecCCcCCc-----------hHHHHHHHHHHhh-----hc--cEEEEec
Confidence 458999998888865 4445654 22 22233333332 1222333333221 11 2334556
Q ss_pred hhhhhc-CChH----HHHHHHHHHcCCcEEEeChH------HHHHHHHhhhhccCC---------CCCCceEEEEeCCCc
Q 008124 95 AAVRAA-ENKD----EFVECVREKVGFEVDVLTGE------QEAKFVYMGVLQFLP---------VFDRLVLSVDIGGGS 154 (577)
Q Consensus 95 sA~R~A-~N~~----~fl~~i~~~tGl~i~VIsg~------eEA~l~~~gv~~~~~---------~~~~~~lviDIGGGS 154 (577)
.=+-++ .++. .+++.+.+..+-+|.++.+. +++.=...-+..+-+ ...++++++||||-.
T Consensus 59 gELaD~f~~k~eGV~~I~~~v~~~~~~~v~i~~~dGG~l~~~~a~~~p~~~aaanw~ASa~~~A~~~~~~~llvDIGsTT 138 (334)
T 3cet_A 59 AELADSYETKKEGVDNILNAAESAFGSNISVFDSNGNFISLESAKTNNMKVSASNWCGTAKWVSKNIEENCILVDMGSTT 138 (334)
T ss_dssp CC------CTTHHHHHHHHHHHHHHTTCEEEECSSSCEEETTHHHHCGGGTBCCSSHHHHHHHHHHTCSSEEEEEECSSC
T ss_pred hhhhhhhcCHHHHHHHHHHHHHHhcCCceEEEecCCCcccHHHHhhCHHHHHhcCHHHHHHHHHHhcCCCEEEEEcCcch
Confidence 555554 2332 33456666666677554432 234211211111100 011358999999999
Q ss_pred eEEEEeeCCeEEE
Q 008124 155 TEFVIGKRGKVVF 167 (577)
Q Consensus 155 tEl~~~~~~~~~~ 167 (577)
|.|+.+.+|++..
T Consensus 139 TDIipi~~G~pl~ 151 (334)
T 3cet_A 139 TDIIPIVEGKVVA 151 (334)
T ss_dssp EEEEEEETTEECC
T ss_pred hhhhhhcCCeecc
Confidence 9999999998753
No 121
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=36.22 E-value=38 Score=36.74 Aligned_cols=56 Identities=16% Similarity=0.208 Sum_probs=38.6
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeee-eeccCCCcCCCCCHHHHHHHHHHHHHHHH
Q 008124 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPV-ILGRDLSSSCSISTQSQARSVESLLMFRD 77 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~v-rLg~~~~~~g~Ls~e~i~r~~~~L~~f~~ 77 (577)
++++.||||+.++...++++.+ |.++++..-..++ .+ +|. .+.+..+.++|++-.+
T Consensus 2 ~~i~GiDIGnsttev~l~~~~~-g~i~~l~~g~~~ttGi-KGt-------~~Ni~g~~~si~~a~~ 58 (607)
T 1nbw_A 2 PLIAGIDIGNATTEVALASDYP-QARAFVASGIVATTGM-KGT-------RDNIAGTLAALEQALA 58 (607)
T ss_dssp CEEEEEEECSSEEEEEEEECBT-TBCCCCEEEEEECCSS-TTS-------GGGHHHHHHHHHHHHT
T ss_pred cEEEEEEecCceEEEEEEEEcC-CeEEEEEeecccCCcc-cee-------eeCHHHHHHHHHHHHH
Confidence 5789999999999999999875 7777775554442 33 342 3446666666665443
No 122
>1taz_A Calcium/calmodulin-dependent 3',5'-cyclic nucleot phosphodiesterase 1B; PDE1B, hydrolase; HET: CME; 1.77A {Homo sapiens} SCOP: a.211.1.2
Probab=36.13 E-value=1.1e+02 Score=31.29 Aligned_cols=42 Identities=12% Similarity=0.144 Sum_probs=28.1
Q ss_pred hhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHHhhccc
Q 008124 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGH 413 (577)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~ 413 (577)
.||..|...+-.+.... ++.. .+++-+..-|-+||+.||+|.
T Consensus 85 ~HA~dV~q~~~~ll~~~----~l~~-------~l~~le~~alliAAl~HDv~H 126 (365)
T 1taz_A 85 IHAADVTQTVHCFLLRT----GMVH-------CLSEIELLAIIFAAAIHDYEH 126 (365)
T ss_dssp HHHHHHHHHHHHHHHHH----SGGG-------GSCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHhh----hHHh-------hCCHHHHHHHHHHHHHhcCCC
Confidence 67777777665543322 1111 356777888999999999994
No 123
>1miw_A TRNA CCA-adding enzyme; tRNA nucleotidyltransferase, translation, transferase; HET: ATP; 3.00A {Geobacillus stearothermophilus} SCOP: a.173.1.1 d.218.1.4 PDB: 1miv_A* 1miy_A*
Probab=35.05 E-value=27 Score=36.37 Aligned_cols=43 Identities=12% Similarity=0.095 Sum_probs=32.2
Q ss_pred HHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccC
Q 008124 400 EYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRK 454 (577)
Q Consensus 400 ~LL~~Aa~LHdIG~~I~~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~~yhrk 454 (577)
.++.||++|||+|. +-...+. . =++||.+++..++.++++|..
T Consensus 248 ~~l~~aaLlhdigk--------~~a~~~l-~---rLkls~~~~~~v~~Lv~~~~~ 290 (404)
T 1miw_A 248 REERWALLCHALGV--------QESRPFL-R---AWKLPNKVVDEAGAILTALAD 290 (404)
T ss_dssp HHHHHHHHHHHHTC--------SCHHHHH-H---HTTCCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhCCH--------HHHHHHH-H---HcCCCHHHHHHHHHHHHHHHh
Confidence 36889999999996 1222233 2 278999999999999998754
No 124
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=33.50 E-value=56 Score=32.60 Aligned_cols=58 Identities=17% Similarity=0.135 Sum_probs=39.6
Q ss_pred CceEEEEEecccceEEEEEEEeCCCCEEEEEeeeee---eeeccCCCcCCCCCHHHHHHHHHHHHH
Q 008124 12 QTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQP---VILGRDLSSSCSISTQSQARSVESLLM 74 (577)
Q Consensus 12 ~~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~---vrLg~~~~~~g~Ls~e~i~r~~~~L~~ 74 (577)
.....+||||..|.-+.+++ ++.+ ......+ |||-+..+.++..+++.++++.+.++.
T Consensus 137 ~~~~lvvDIGGGStEl~~~~---~~~~--~~~~Sl~~G~v~l~e~~~~~~~~~~~~~~~~~~~i~~ 197 (315)
T 1t6c_A 137 EGEVCVVDQGGGSTEYVFGK---GYKV--REVISLPIGIVNLTETFFKQDPPTEEEVKRFFEFLEK 197 (315)
T ss_dssp CSEEEEEEEETTEEEEEEEE---TTEE--EEEEEECCCHHHHHHHHCCSSSCCHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCcEEEEEEe---CCce--eeEEEEeccHHHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 44589999999999999985 3433 3333333 466667667778888887776655544
No 125
>1vfg_A A-adding enzyme, poly A polymerase; transferase, RNA, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: APC; 2.80A {Aquifex aeolicus} SCOP: a.173.1.1 d.218.1.4
Probab=33.30 E-value=29 Score=35.81 Aligned_cols=43 Identities=9% Similarity=0.042 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhcc
Q 008124 399 LEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHR 453 (577)
Q Consensus 399 r~LL~~Aa~LHdIG~~I~~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~~yhr 453 (577)
..++.+||+|||+|. +-...+. . =.+||.+++..++.++++|.
T Consensus 256 ~~~l~laaLlhdi~~--------~~a~~~~-~---rL~ls~~~~~~v~~Lv~~h~ 298 (390)
T 1vfg_A 256 YGWLYLLILISNLDY--------ERGKHFL-E---EMSAPSWVRETYKFMKFKLG 298 (390)
T ss_dssp HHHHHHHHHHCSCCS--------STTHHHH-H---HTTCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHccCCH--------HHHHHHH-H---HcCCCHHHHHHHHHHHHHHH
Confidence 468999999999995 1122222 2 26899999999999998773
No 126
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=32.96 E-value=47 Score=32.38 Aligned_cols=29 Identities=10% Similarity=0.068 Sum_probs=26.6
Q ss_pred eEEEEeCCCceEEEEeeCCeEEEEEEEeh
Q 008124 145 VLSVDIGGGSTEFVIGKRGKVVFCESVNL 173 (577)
Q Consensus 145 ~lviDIGGGStEl~~~~~~~~~~~~Slpl 173 (577)
.|++|||+-++-+.+++++++...++++-
T Consensus 4 lL~IDIGNT~iK~gl~d~~~l~~~~r~~T 32 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGDEIKLRFRHTS 32 (266)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEEC
T ss_pred EEEEEECCCeEEEEEEECCEEEEEEEecC
Confidence 58999999999999999999998888874
No 127
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=32.30 E-value=47 Score=35.61 Aligned_cols=57 Identities=18% Similarity=0.116 Sum_probs=39.0
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeee-eeeeccCCCcCCCCCHHHHHHHHHHHH
Q 008124 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQ-PVILGRDLSSSCSISTQSQARSVESLL 73 (577)
Q Consensus 14 ~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~-~vrLg~~~~~~g~Ls~e~i~r~~~~L~ 73 (577)
...+||||..|+-+.+++ ++.+....+..- .|||-+..+.++.++++.++++.+.++
T Consensus 138 ~~lviDIGGGStEl~~~~---~~~~~~~~Sl~lG~vrlte~f~~~~~~~~~~~~~~~~~i~ 195 (513)
T 1u6z_A 138 RKLVIDIGGGSTELVIGE---NFEPILVESRRMGCVSFAQLYFPGGVINKENFQRARMAAA 195 (513)
T ss_dssp CEEEEEECSSCEEEEEEE---TTEEEEEEEESCCHHHHHHHHSGGGBCCHHHHHHHHHHHH
T ss_pred CEEEEEECCCcEEEEEEe---CCeeeEEEEEeccHHHHHHHHcccCCCCHHHHHHHHHHHH
Confidence 478999999999999984 343332222221 346767777778889998888755444
No 128
>2paq_A 5'-deoxynucleotidase YFBR; HD domain phosphoh structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; 2.10A {Escherichia coli} SCOP: a.211.1.1 PDB: 2par_A* 2pau_A*
Probab=30.55 E-value=52 Score=30.57 Aligned_cols=46 Identities=11% Similarity=0.114 Sum_probs=29.5
Q ss_pred hhHHHHHHHHHHHHHHHh-hcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCCCC
Q 008124 361 KAGAQCASIAKDIFEGLR-KCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKG 419 (577)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~-~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~~I~~~~ 419 (577)
+|+-+|+.+|..|=. +. +.++- +-+......+|+|||+|-.+-.+-
T Consensus 34 eHS~~VA~lA~~la~-~~~~~~~~------------~vD~~~~~~~aLlHDi~E~~~GDi 80 (201)
T 2paq_A 34 EHSLQVAMVAHALAA-IKNRKFGG------------NVNAERIALLAMYHDASEVLTGDL 80 (201)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHSCC------------CCCHHHHHHHHHHTTTTHHHHCCC
T ss_pred HHHHHHHHHHHHHHh-hhHHhcCc------------ccCHHHHHHHHHhcccccccCCCC
Confidence 688888888886421 11 22210 112356778899999999887664
No 129
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=29.16 E-value=37 Score=35.89 Aligned_cols=22 Identities=23% Similarity=0.315 Sum_probs=19.0
Q ss_pred CceEEEEEecccceEEEEEEEe
Q 008124 12 QTLFASIDMGTSSFKLLIIRAY 33 (577)
Q Consensus 12 ~~~~AvIDIGSNSirL~I~~~~ 33 (577)
.+.+.+||+|+.|+|..+++.+
T Consensus 3 ~~~~lgiDiGtts~k~~l~d~~ 24 (489)
T 2uyt_A 3 FRNCVAVDLGASSGRVMLARYE 24 (489)
T ss_dssp CEEEEEEEECSSEEEEEEEEEE
T ss_pred cceEEEEEecCCCceEEEEEec
Confidence 3468899999999999999864
No 130
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=27.34 E-value=2.4e+02 Score=27.74 Aligned_cols=122 Identities=11% Similarity=0.145 Sum_probs=0.0
Q ss_pred ccccccCCCceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 008124 4 NTSYMQIPQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHN 83 (577)
Q Consensus 4 ~~~~~~~~~~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~ 83 (577)
|-+| ..+.+||||...+|+.+++.. +|.+....+... ...+...+.++.|.+... ..
T Consensus 10 ~~~~-----~~~lgiDiGGT~i~~~l~dl~-~g~i~~~~~~~~----------------~~~~~~~~~i~~~~~~~~-~~ 66 (332)
T 1sz2_A 10 HGST-----KYALVGDVGGTNARLALCDIA-SGEISQAKTYSG----------------LDYPSLEAVIRVYLEEHK-VE 66 (332)
T ss_dssp ---------CEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEG----------------GGCSCHHHHHHHHHHHSC-CC
T ss_pred cCCC-----CEEEEEEechhheEEEEEECC-CCcEEEEEEecC----------------CCcCCHHHHHHHHHHhcC-CC
Q ss_pred CCcccEEEEeehhhhhcC---------ChHHHHHHHHHHcCCc-EEEeChHHHHHHHHhhh--------hccCCCCCCce
Q 008124 84 ISRDHTRAVATAAVRAAE---------NKDEFVECVREKVGFE-VDVLTGEQEAKFVYMGV--------LQFLPVFDRLV 145 (577)
Q Consensus 84 v~~~~i~~vATsA~R~A~---------N~~~fl~~i~~~tGl~-i~VIsg~eEA~l~~~gv--------~~~~~~~~~~~ 145 (577)
+ .-.+||....=+.. + -. .+.+++++|++ |.|.+.-.=+-|.-.-. -..-....++.
T Consensus 67 i---~gigi~~pG~vd~~~~~~~nl~w~-~~-~~~l~~~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~ 141 (332)
T 1sz2_A 67 V---KDGCIAIACPITGDWVAMTNHTWA-FS-IAEMKKNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPI 141 (332)
T ss_dssp C---CEEEEEESSCCCSSEECCSSSCCC-EE-HHHHHHHHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCE
T ss_pred c---cEEEEEEeCceeCCEEeeeCCCCc-CC-HHHHHHHhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcE
Q ss_pred EEEEeCCC
Q 008124 146 LSVDIGGG 153 (577)
Q Consensus 146 lviDIGGG 153 (577)
+++-+|.|
T Consensus 142 ~~v~~GTG 149 (332)
T 1sz2_A 142 AVYGAGTG 149 (332)
T ss_dssp EEEEESSS
T ss_pred EEEEcCcc
No 131
>4dzo_A Mitotic spindle assembly checkpoint protein MAD1; homodimer, kinetochore, mitosis, spindle checkpoint protein, nucleus, cell cycle; HET: MSE; 1.76A {Homo sapiens}
Probab=27.21 E-value=49 Score=28.38 Aligned_cols=43 Identities=14% Similarity=0.265 Sum_probs=29.8
Q ss_pred HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCC
Q 008124 104 DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGG 152 (577)
Q Consensus 104 ~~fl~~i~~~tGl~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGG 152 (577)
.+|.+.+..-+|+.|+.++.. ++. +.+-....+++.+++|..|
T Consensus 32 ~eFReav~~LlGykId~~~~~---~~r---l~S~Ya~~~~d~L~F~~~~ 74 (123)
T 4dzo_A 32 QEFRKACYTLTGYQIDITTEN---QYR---LTSLYAEHPGDCLIFKATS 74 (123)
T ss_dssp HHHHHHHHHHHSEEEEEETTT---EEE---EEETTCSSTTCCEEEEECC
T ss_pred HHHHHHHHHHhCeEEEEccCC---eEE---EEEeecCCCCCeEEEEecC
Confidence 689999999999999999642 222 2233333335689999865
No 132
>1zkl_A HCP1, TM22, high-affinity CAMP-specific 3',5'-cyclic phosphodiesterase 7A; PDE, hydrolase; HET: IBM; 1.67A {Homo sapiens} PDB: 3g3n_A*
Probab=27.17 E-value=99 Score=31.39 Aligned_cols=42 Identities=21% Similarity=0.188 Sum_probs=27.3
Q ss_pred hhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHHhhccc
Q 008124 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGH 413 (577)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~ 413 (577)
.||..|...+-.+. ... ++.. .+++-+..-+-+||+.||+|.
T Consensus 86 ~HA~dV~q~~~~ll---~~~-~l~~-------~l~~le~~alliAAl~HDv~H 127 (353)
T 1zkl_A 86 VHAADVTQAMHCYL---KEP-KLAN-------SVTPWDILLSLIAAATHDLDH 127 (353)
T ss_dssp HHHHHHHHHHHHHH---TSH-HHHT-------TCCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHH---hhh-HHhh-------hCCHHHHHHHHHHHHHhccCC
Confidence 57777766654442 211 1111 356777888999999999995
No 133
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=26.24 E-value=1.5e+02 Score=31.13 Aligned_cols=70 Identities=16% Similarity=0.305 Sum_probs=37.1
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCC--CH-HHHHHHHHHHHHHHHHHHHcCCCcccEEE
Q 008124 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSI--ST-QSQARSVESLLMFRDIIQSHNISRDHTRA 91 (577)
Q Consensus 15 ~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~L--s~-e~i~r~~~~L~~f~~~~~~~~v~~~~i~~ 91 (577)
+.+||+|+.|+|..+++. +|. ++...+.+...- ....|.. ++ +-.+.+++++++. +++.+. .+|.+
T Consensus 2 ~lgiDiGtt~~k~~l~d~--~g~--~l~~~~~~~~~~--~p~~g~~e~d~~~~~~~i~~~i~~~---~~~~~~--~~i~~ 70 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNE--QGE--VVAAQTEKLTVS--RPHPLWSEQDPEQWWQATDRAMKAL---GDQHSL--QDVKA 70 (484)
T ss_dssp EEEEEECSSEEEEEEECT--TSC--EEEEEEEECCCB--CSSTTCCEECHHHHHHHHHHHHHHH---HHHSCC--TTCCE
T ss_pred EEEEEecCcccEEEEECC--CCC--EEEEEEeccccc--cCCCCCEeECHHHHHHHHHHHHHHH---HHhCCc--cceEE
Confidence 568999999999999964 454 344444443221 1222222 33 3345555566554 333332 24555
Q ss_pred Eeeh
Q 008124 92 VATA 95 (577)
Q Consensus 92 vATs 95 (577)
|+-+
T Consensus 71 Igis 74 (484)
T 2itm_A 71 LGIA 74 (484)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 5533
No 134
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=26.19 E-value=93 Score=31.38 Aligned_cols=62 Identities=11% Similarity=0.077 Sum_probs=41.4
Q ss_pred ceEEEEEecccceEEEEEEE--eCC-CCEEEEEeee-eeeeeccCCCcCCCCCHHHHHHHHHHHHH
Q 008124 13 TLFASIDMGTSSFKLLIIRA--YPN-GKFLTIDTLK-QPVILGRDLSSSCSISTQSQARSVESLLM 74 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~--~~~-~~~~~l~~~k-~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~ 74 (577)
....+||||..|.-+.+++- ... +.+....+.. -.+||-+..+.++..+++.++++.+.++.
T Consensus 146 ~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~SlplG~v~lt~~~~~~~~~~~~~~~~~~~~i~~ 211 (343)
T 3cer_A 146 APYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSMNIGSVRMTERHLTNDPPTQTQIDEAVADVDE 211 (343)
T ss_dssp SSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEESCCHHHHHHHTCCSSSCCHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCceEEEEeecCccCcccccceeEEEehhHHHHHHHhcccCCCCHHHHHHHHHHHHH
Confidence 45789999999999999853 110 2221121222 13467778788889999988887777665
No 135
>1f0j_A PDE4B, phosphodiesterase 4B; PDE phosphodiesterase, hydrolase; 1.77A {Homo sapiens} SCOP: a.211.1.2 PDB: 1ro6_A* 1ro9_A* 1ror_A* 3hmv_A* 1tb5_A* 1xm6_A* 1xlx_A* 1xm4_A* 1xlz_A* 1xmu_A* 1xmy_A* 1xn0_A* 1xos_A* 1xot_B* 1y2h_A* 1y2j_A* 3kkt_A* 3g4i_A* 3g4k_A* 3g4l_A* ...
Probab=25.08 E-value=1.7e+02 Score=30.00 Aligned_cols=42 Identities=21% Similarity=0.249 Sum_probs=27.6
Q ss_pred hhHHHHHHHHHHHHHHHhhcccccchhhhhhcccCcchHHHHHHHHHHhhccc
Q 008124 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGH 413 (577)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aa~LHdIG~ 413 (577)
.||..|...+-.| +.. -++.. .+++-+..-|-+||+.||+|.
T Consensus 86 ~HA~dV~q~~~~l---l~~-~~l~~-------~l~~le~~alliAAl~HDvdH 127 (377)
T 1f0j_A 86 LHAADVAQSTHVL---LST-PALDA-------VFTDLEILAAIFAAAIHDVDH 127 (377)
T ss_dssp HHHHHHHHHHHHH---HTC-GGGTT-------TSCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHH---Hhc-chhhh-------hCCHHHHHHHHHHHHHcCCCC
Confidence 6777777665443 321 11111 357777888999999999995
No 136
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=23.98 E-value=1.3e+02 Score=26.42 Aligned_cols=59 Identities=12% Similarity=0.032 Sum_probs=41.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEEeehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHH
Q 008124 60 ISTQSQARSVESLLMFRDIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEA 127 (577)
Q Consensus 60 Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vATsA~R~A~N~~~fl~~i~~~tGl~i~VIsg~eEA 127 (577)
.+.+.|..++ .+.++++|++...|.++||-.+.. .+.-+.++-++.|++++..+.+|=+
T Consensus 22 ~~~~~i~~ai------~~aL~~~~l~~~~v~~latid~K~---dE~gL~~~A~~lg~pl~~~~~eeL~ 80 (145)
T 2w6k_A 22 CSAEHLRALL------ERTLGEHGRSLAELDALASIDGKR---DEPGLRQLATLLERPVHFLAPAVLH 80 (145)
T ss_dssp CCHHHHHHHH------HHHHHHTTCCGGGCCEEEEECSSS---CCHHHHHHHHHHTSCEEEECHHHHH
T ss_pred CCHHHHHHHH------HHHHHHcCCCHHHcceEechHHhC---CCHHHHHHHHHhCCCcEEeCHHHHh
Confidence 3566655443 455667898888899999987653 3345556667889999999877644
No 137
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=23.02 E-value=1.5e+02 Score=23.98 Aligned_cols=83 Identities=17% Similarity=0.252 Sum_probs=54.1
Q ss_pred EEEEEecccceEEEEEEEeCCCCE-EEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEEe
Q 008124 15 FASIDMGTSSFKLLIIRAYPNGKF-LTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (577)
Q Consensus 15 ~AvIDIGSNSirL~I~~~~~~~~~-~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (577)
+-+||.|+-.|=+.|.+. .+.+ .++...+. +. . -..+...++++++|++. -.+||
T Consensus 3 iLglD~G~kriGvAvsd~--~~~~A~pl~ti~~-----~~--------~------~~~~~~l~~li~e~~v~---~iVvG 58 (98)
T 1iv0_A 3 VGALDVGEARIGLAVGEE--GVPLASGRGYLVR-----KT--------L------EEDVEALLDFVRREGLG---KLVVG 58 (98)
T ss_dssp EEEEEESSSEEEEEEECS--CCSSCCCEEEEEC-----CC--------H------HHHHHHHHHHHHHHTCC---EEEEE
T ss_pred EEEEEeCCCEEEEEEEeC--CCCeeeeeEEEEc-----cC--------c------HHHHHHHHHHHHHcCCC---EEEEe
Confidence 679999999998888753 2321 22211110 00 0 14456777888889984 46677
Q ss_pred -------ehhhhhcCChHHHHHHHHHHcCCcEEEeCh
Q 008124 94 -------TAAVRAAENKDEFVECVREKVGFEVDVLTG 123 (577)
Q Consensus 94 -------TsA~R~A~N~~~fl~~i~~~tGl~i~VIsg 123 (577)
|. =..|.-...|.++++.+ +++|...+.
T Consensus 59 lP~~mdGt~-~~~~~~~~~f~~~L~~~-~lpV~~~DE 93 (98)
T 1iv0_A 59 LPLRTDLKE-SAQAGKVLPLVEALRAR-GVEVELWDE 93 (98)
T ss_dssp CCCCCCSSS-CCCSSTTHHHHHHHHHT-TCEEEEECC
T ss_pred eccCCCCCc-CHHHHHHHHHHHHHhcC-CCCEEEECC
Confidence 32 24566778999999998 999988763
No 138
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=21.96 E-value=19 Score=36.52 Aligned_cols=74 Identities=15% Similarity=0.237 Sum_probs=38.1
Q ss_pred HHHHHcCCCcccEEEEeehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCce
Q 008124 77 DIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGST 155 (577)
Q Consensus 77 ~~~~~~~v~~~~i~~vATsA~R~A~N~~~fl~~i~~~tGl~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGSt 155 (577)
+.++.+|.. ++.+|....+.+ ...+.+.+.++ +.|+++.+.++..+..+...--...+. ..+.-+|+=+||||+
T Consensus 27 ~~l~~~g~~--~~livtd~~~~~-~~~~~v~~~L~-~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~~~d~IIavGGGsv 100 (354)
T 3ce9_A 27 QIIKKGNFK--RVSLYFGEGIYE-LFGETIEKSIK-SSNIEIEAVETVKNIDFDEIGTNAFKI-PAEVDALIGIGGGKA 100 (354)
T ss_dssp HHHGGGTCS--EEEEEEETTHHH-HHHHHHHHHHH-TTTCEEEEEEEECCCBHHHHHHHHTTS-CTTCCEEEEEESHHH
T ss_pred HHHHhcCCC--eEEEEECccHHH-HHHHHHHHHHH-HcCCeEEEEecCCCCCHHHHHHHHHhh-hcCCCEEEEECChHH
Confidence 334455653 677777666655 23444444443 458888777632222111111112121 123348999999986
No 139
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=21.57 E-value=3.2e+02 Score=25.89 Aligned_cols=134 Identities=11% Similarity=0.123 Sum_probs=0.0
Q ss_pred CCceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEE
Q 008124 11 PQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR 90 (577)
Q Consensus 11 ~~~~~AvIDIGSNSirL~I~~~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~ 90 (577)
+.+.+-+||||=.++++-+++ ++.+....+......--.+ +-...+.++++. ...++.
T Consensus 1 ~~~M~L~IDIGNT~ik~gl~~---~~~l~~~~r~~T~~~~t~d----------------e~~~~l~~l~~~---~~~~i~ 58 (249)
T 3bex_A 1 MDPMYLLVDVGNTHSVFSITE---DGKTFRRWRLSTGVFQTED----------------ELFSHLHPLLGD---AMREIK 58 (249)
T ss_dssp CCCEEEEEEECSSEEEEEEES---SSSSCEEEEEECCTTCCHH----------------HHHHHHHHHHGG---GGGGEE
T ss_pred CCceEEEEEECCCeEEEEEEE---CCEEEEEEEecCCCCCCHH----------------HHHHHHHHHHhh---ccccCC
Q ss_pred EEeehhhhhcCChHHHHHHHHHHcCCcEEEeChHHH-----HH-----------HHHhhhhccCCCCCCceEEEEeCCCc
Q 008124 91 AVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQE-----AK-----------FVYMGVLQFLPVFDRLVLSVDIGGGS 154 (577)
Q Consensus 91 ~vATsA~R~A~N~~~fl~~i~~~tGl~i~VIsg~eE-----A~-----------l~~~gv~~~~~~~~~~~lviDIGGGS 154 (577)
.++=+.+- ..-...+.+.+++..+.++.++ +..- .| ...+|+.... ..+.+|+|.|.+-
T Consensus 59 ~i~IsSVv-p~~~~~~~~~~~~~~~~~p~~v-~~~~~gl~~~y~~P~~lG~DR~~~~~aa~~~~---~~~~iVvD~GTA~ 133 (249)
T 3bex_A 59 GIGVASVV-PTQNTVIERFSQKYFHISPIWV-KAKNGCVKWNVKNPSEVGADRVANVVAFVKEY---GKNGIIIDMGTAT 133 (249)
T ss_dssp EEEEEESC-HHHHHHHHHHHHHHHSCCCEEC-CCCSSSSEECSSCGGGSCHHHHHHHHHHHHHT---CSCEEEEEESSEE
T ss_pred EEEEEcCc-HHHHHHHHHHHHHhcCCCeEEE-EccCCCceeccCChhhcCHHHHHHHHHHHHHc---CCCEEEEEcCCce
Q ss_pred eEEEEeeCCeEEEEEEEe
Q 008124 155 TEFVIGKRGKVVFCESVN 172 (577)
Q Consensus 155 tEl~~~~~~~~~~~~Slp 172 (577)
|==.+ .+|+..-..=+|
T Consensus 134 T~d~v-~~g~~lGG~I~P 150 (249)
T 3bex_A 134 TVDLV-VNGSYEGGAILP 150 (249)
T ss_dssp EEEEE-ETTEEEEEEEEE
T ss_pred EEEEE-eCCeEeeEEECc
No 140
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=21.54 E-value=62 Score=33.71 Aligned_cols=31 Identities=26% Similarity=0.353 Sum_probs=20.1
Q ss_pred cccccccCCCceEEEEEecccceEEEEEEEe
Q 008124 3 TNTSYMQIPQTLFASIDMGTSSFKLLIIRAY 33 (577)
Q Consensus 3 ~~~~~~~~~~~~~AvIDIGSNSirL~I~~~~ 33 (577)
+|-|-..|+++++=+|--||.|+++.+++..
T Consensus 9 ~~gm~~~Ms~klILviN~GSSS~K~~lf~~~ 39 (415)
T 3sk3_A 9 HHGMASHMSSKLVLVLNCGSSSLKFAIIDAV 39 (415)
T ss_dssp ---------CCEEEEEEECSSCEEEEEEETT
T ss_pred cccccccCCCCeEEEEeCchHhhhheeEECC
Confidence 4556677888889999999999999999853
No 141
>3eeq_A Putative cobalamin biosynthesis protein G homolog; structural genomics, unknown function, PSI-2, protein structure initiative; 2.30A {Sulfolobus solfataricus} SCOP: c.151.1.1 c.152.1.1
Probab=21.33 E-value=1.3e+02 Score=30.22 Aligned_cols=57 Identities=11% Similarity=0.281 Sum_probs=42.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEEeehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHH
Q 008124 59 SISTQSQARSVESLLMFRDIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKF 129 (577)
Q Consensus 59 ~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vATsA~R~A~N~~~fl~~i~~~tGl~i~VIsg~eEA~l 129 (577)
..+.+.|..+++ +.++++|+++..|.++||-.+. +.++-++.|++++..+.+|=+..
T Consensus 219 g~~~~~i~~ai~------~aL~~~~l~~~~v~~iasid~K--------L~~~A~~l~~pl~~~~~eeL~~v 275 (336)
T 3eeq_A 219 DVKMEEIRDGIY------KVLERLNLKRERIGIIASIREE--------VKKIADEFNVRFRLVNEEEINNF 275 (336)
T ss_dssp SCCHHHHHHHHH------HHHHHHTCCGGGEEEEEESCTT--------HHHHHHHHTCEEEECCHHHHHTC
T ss_pred CCCHHHHHHHHH------HHHHHcCCCHHHhhEEEcHHHH--------HHHHHHHhCCCEEEeCHHHHhhc
Confidence 346666654443 4455678888899999998875 66667788999999999886653
No 142
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=21.07 E-value=1.7e+02 Score=30.71 Aligned_cols=61 Identities=15% Similarity=0.129 Sum_probs=38.7
Q ss_pred ceEEEEEecccceEEEEEEEeC-CCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHH
Q 008124 13 TLFASIDMGTSSFKLLIIRAYP-NGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDI 78 (577)
Q Consensus 13 ~~~AvIDIGSNSirL~I~~~~~-~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~ 78 (577)
-.|-+||+|..++|..+++... ++.+.+.. . ..++-..+.. + =.++-.+...++++.|.+.
T Consensus 68 G~~lalDlGGTn~Rv~~V~l~G~~~~~~i~~-~--~~~ip~~~~~-~-~~~~lfd~Ia~~i~~~l~~ 129 (451)
T 1bdg_A 68 GNFLALDLGGTNYRVLSVTLEGKGKSPRIQE-R--TYCIPAEKMS-G-SGTELFKYIAETLADFLEN 129 (451)
T ss_dssp EEEEEEEESSSSEEEEEEEECC-CCCCEEEE-E--EECCCTTTTT-S-BHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCeEEEEEEecCCCCcceEEEE-E--EEecCCcccC-C-CHHHHHHHHHHHHHHHHHh
Confidence 4689999999999999999864 44444421 1 1223222111 1 1256678888889988653
No 143
>1ou5_A TRNA CCA-adding enzyme, tRNA-nucleotidyltransferase; polymerase, translation; 3.40A {Homo sapiens} SCOP: a.173.1.1 d.218.1.4
Probab=20.46 E-value=17 Score=38.48 Aligned_cols=41 Identities=10% Similarity=0.016 Sum_probs=31.6
Q ss_pred HHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccC
Q 008124 400 EYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRK 454 (577)
Q Consensus 400 ~LL~~Aa~LHdIG~~I~~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~~yhrk 454 (577)
.++.+||+|||+|. ..-+.. =++||.+++..+..++++|..
T Consensus 306 ~~l~lAaLlhDi~k-----------a~~i~~---rLkls~~~~~~v~~Lv~~h~~ 346 (448)
T 1ou5_A 306 PVTLLASLFKVQDD-----------VTKLDL---RLKIAKEEKNLGLFIVKNRKD 346 (448)
T ss_dssp HHHHHGGGCCSTTT-----------THHHHH---HHCCCTTHHHHHHHHTTTTTT
T ss_pred HHHHHHHHhcChHH-----------HHHHHH---HcCCCHHHHHHHHHHHHHHHH
Confidence 47999999999985 222222 268999999999999998854
Done!