BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008127
(577 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 258 bits (660), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 161/478 (33%), Positives = 245/478 (51%), Gaps = 43/478 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY K LG G +G + DK G A+K I+K+ + + EV +L+ L H
Sbjct: 5 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL-DH 63
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
N++K Y FED Y+ ME+ GGEL D I+ + +++E DA
Sbjct: 64 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR-----------------QKFSEVDA 106
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
AV+++Q+L H H +VHRD+KPEN L +S D+ +K DFGLS + G K ++
Sbjct: 107 AVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER 166
Query: 277 VGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336
+G+AYY+APEVL++K + DVWS GVI YILLCG PF +T+ I K V + K F
Sbjct: 167 LGTAYYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDP 226
Query: 337 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID----ISVLNNM 392
W +S+ AK VK +L +P R++A +AL+HPW+ + + L NM
Sbjct: 227 PDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKFCSQKHTDVGKHALTGALGNM 286
Query: 393 RQFVKYSRLKQFALRALASTLDD-EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW 451
++F +L Q A+ + S L EE +L F +D + +G + +E+ + K + W
Sbjct: 287 KKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQW 346
Query: 452 KLK----------ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ 501
K E+ V ILQ++D + +G +++SEFV + L + R
Sbjct: 347 KGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRE------RLL 400
Query: 502 AAFEKFDIDRDGFITPEELRMHTGLKGSIDP----LLEEADIDKDGRISLSEFRRLLR 555
AAF++FD D G IT EEL G+ D +L+E D + DG + EF +++
Sbjct: 401 AAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQ 458
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 258 bits (660), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 164/472 (34%), Positives = 252/472 (53%), Gaps = 45/472 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G +G + DK A+K I K + + + EV +L+ L H N++K
Sbjct: 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTS-VSTSSNSKLLEEVAVLKLL-DHPNIMK 100
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
Y+ FED Y+ ME +GGEL D I+ +M ++ E DAAV+++
Sbjct: 101 LYDFFEDKRNYYLVMECYKGGELFDEIIHRM-----------------KFNEVDAAVIIK 143
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q+L H H +VHRD+KPEN L +S ++D+ +K DFGLS + KK ++ +G+AY
Sbjct: 144 QVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAY 203
Query: 282 YVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 341
Y+APEVL++K + DVWSIGVI +ILL G PF +T+ I ++V + K F W +
Sbjct: 204 YIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKN 263
Query: 342 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDI----SVLNNMRQFVK 397
+S AKD +K++L D + R++A QAL HPW++E E I++ + + NMR+F
Sbjct: 264 VSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQN 323
Query: 398 YSRLKQFALRALASTL-DDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--------- 447
+L Q AL +AS L EE +L D F ID + +G + +E+ +K
Sbjct: 324 SQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVF 383
Query: 448 DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKF 507
DLP ES V IL A D + +G +D+SEFV + L D + ++AF+KF
Sbjct: 384 DLPQ--IESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKD------KLESAFQKF 435
Query: 508 DIDRDGFITPEELRMHTGL----KGSIDPLLEEADIDKDGRISLSEFRRLLR 555
D D +G I+ +EL GL + ++ D + DG + EF ++++
Sbjct: 436 DQDGNGKISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQ 487
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 246/480 (51%), Gaps = 44/480 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F RY ++LG G FG + DK G AVK I K ++ E + REV++L+ L
Sbjct: 48 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H N++K Y FED Y Y+ E+ GGEL D I+++ R++E
Sbjct: 108 -DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR-----------------KRFSE 149
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
DAA ++RQ+L H + +VHRD+KPEN L +S +D++++ DFGLS + KK
Sbjct: 150 VDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 209
Query: 274 QDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
+D +G+AYY+APEVL + DVWS GVI YILL G PF E I K+V + K
Sbjct: 210 KDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 269
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN--- 390
F W +S SAKD ++K+L P R++A AL H W++ +I +D+ L+
Sbjct: 270 FELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT-YTKEQISVDVPSLDNAI 328
Query: 391 -NMRQFVKYSRLKQFALRALASTLDDE-ELADLRDQFDAIDVDKNGSISLEEMRQALAKD 448
N+RQF +L Q AL + S L + E +L F +D + +G + E+ + +
Sbjct: 329 LNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKEL 388
Query: 449 LPWKLKESRVL----------EILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498
+ K +++ +L ++L A+D + +G +++SEFV + L +
Sbjct: 389 MRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRE------ 442
Query: 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLL 554
R + AF FD D G I+ EL G+ + +L E D + DG + EF+++L
Sbjct: 443 RLERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 502
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 252 bits (643), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 246/480 (51%), Gaps = 44/480 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F RY ++LG G FG + DK G AVK I K ++ E + REV++L+ L
Sbjct: 47 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H N++K Y FED Y Y+ E+ GGEL D I+++ R++E
Sbjct: 107 -DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR-----------------KRFSE 148
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
DAA ++RQ+L H + +VHRD+KPEN L +S +D++++ DFGLS + KK
Sbjct: 149 VDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 208
Query: 274 QDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
+D +G+AYY+APEVL + DVWS GVI YILL G PF E I K+V + K
Sbjct: 209 KDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 268
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN--- 390
F W +S SAKD ++K+L P R++A AL H W++ +I +D+ L+
Sbjct: 269 FELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT-YTKEQISVDVPSLDNAI 327
Query: 391 -NMRQFVKYSRLKQFALRALASTLDDE-ELADLRDQFDAIDVDKNGSISLEEMRQALAKD 448
N+RQF +L Q AL + S L + E +L F +D + +G + E+ + +
Sbjct: 328 LNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKEL 387
Query: 449 LPWKLKESRVL----------EILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498
+ K +++ +L ++L A+D + +G +++SEFV + L +
Sbjct: 388 MRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRE------ 441
Query: 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLL 554
R + AF FD D G I+ EL G+ + +L E D + DG + EF+++L
Sbjct: 442 RLERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 501
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 251 bits (642), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 246/480 (51%), Gaps = 44/480 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F RY ++LG G FG + DK G AVK I K ++ E + REV++L+ L
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H N++K Y FED Y Y+ E+ GGEL D I+++ R++E
Sbjct: 84 -DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR-----------------KRFSE 125
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
DAA ++RQ+L H + +VHRD+KPEN L +S +D++++ DFGLS + KK
Sbjct: 126 VDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 185
Query: 274 QDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
+D +G+AYY+APEVL + DVWS GVI YILL G PF E I K+V + K
Sbjct: 186 KDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 245
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN--- 390
F W +S SAKD ++K+L P R++A AL H W+ + +I +D+ L+
Sbjct: 246 FELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWI-QTYTKEQISVDVPSLDNAI 304
Query: 391 -NMRQFVKYSRLKQFALRALASTLDDE-ELADLRDQFDAIDVDKNGSISLEEMRQALAKD 448
N+RQF +L Q AL + S L + E +L F +D + +G + E+ + +
Sbjct: 305 LNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKEL 364
Query: 449 LPWKLKESRVL----------EILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498
+ K +++ +L ++L A+D + +G +++SEFV + L +
Sbjct: 365 MRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRE------ 418
Query: 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLL 554
R + AF FD D G I+ EL G+ + +L E D + DG + EF+++L
Sbjct: 419 RLERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 478
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 164/499 (32%), Positives = 250/499 (50%), Gaps = 57/499 (11%)
Query: 85 RTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK----NKMILPIAV 140
R + + F RY I +LG G FG D+ AVK I K NK
Sbjct: 11 RENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-----DT 65
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSA 200
+ REV++L+ L H N++K + ED + YI EL GGEL D I+
Sbjct: 66 STILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII----------- 113
Query: 201 WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
K R++E DAA +++Q+ H H +VHRD+KPEN L +S ++D +K D
Sbjct: 114 ------KRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIID 167
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTE 320
FGLS + K +D +G+AYY+APEVL+ + DVWS GVI YILL G PF+ K E
Sbjct: 168 FGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNE 227
Query: 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR----EG 376
I K V K F W +IS+ AKD ++K+L P R+TA Q L HPW++ E
Sbjct: 228 YDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSET 287
Query: 377 GDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDD-EELADLRDQFDAIDVDKNGS 435
S++P S + N+RQF +L Q AL +AS L +E L + F +D + +G
Sbjct: 288 PTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQLTEIFRKLDTNNDGM 347
Query: 436 ISLEEMRQALAKDLPWKLKESRVL-------------EILQAIDCNTDGLVDFSEFVAAT 482
+ +E+ + + + K +S L ++ +D + G +++SEF+A+
Sbjct: 348 LDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASA 407
Query: 483 LHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEEL-RMHTGLKGSI-----DPLLEE 536
+ L + R + AF+ FD D G I+ +EL ++ + SI + ++E+
Sbjct: 408 IDRTILLSRE------RMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQ 461
Query: 537 ADIDKDGRISLSEFRRLLR 555
D +KDG + +EF +L+
Sbjct: 462 VDNNKDGEVDFNEFVEMLQ 480
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 161/480 (33%), Positives = 236/480 (49%), Gaps = 44/480 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F RY ++LG G FG + DK G AVK I K ++ E + REV++L+ L
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H N+ K Y FED Y Y+ E+ GGEL D I+++ R++E
Sbjct: 84 -DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISR-----------------KRFSE 125
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
DAA ++RQ+L H + +VHRD+KPEN L +S +D++++ DFGLS + KK
Sbjct: 126 VDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKX 185
Query: 274 QDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
+D +G+AYY+APEVL + DVWS GVI YILL G PF E I K+V + K
Sbjct: 186 KDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 245
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN--- 390
F W +S SAKD ++K L P R++A AL H W+ + +I +D+ L+
Sbjct: 246 FELPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEWI-QTYTKEQISVDVPSLDNAI 304
Query: 391 -NMRQFVKYSRLKQFALRALASTL-DDEELADLRDQFDAIDVDKNGSISLEEMRQAL--- 445
N+RQF +L Q AL S L +E +L F D + +G + E+ +
Sbjct: 305 LNIRQFQGTQKLAQAALLYXGSKLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKEL 364
Query: 446 -------AKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498
A L E V ++L A+D + +G +++SEFV L +
Sbjct: 365 XRXKGQDASXLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAXDRKTLLSRE------ 418
Query: 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLL 554
R + AF FD D G I+ EL G+ + +L E D + DG + EF++ L
Sbjct: 419 RLERAFRXFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQXL 478
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 155/477 (32%), Positives = 247/477 (51%), Gaps = 51/477 (10%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEK-----------NKMILPIAVEDVKREVKILQA 152
LG G +G + +K A+K I+K NK I E++ E+ +L++
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFH-EEIYNEISLLKS 102
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
L H N++K ++ FED Y Y+ E EGGEL ++I+ + ++
Sbjct: 103 L-DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR-----------------HKFD 144
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 272
E DAA +++Q+L H H +VHRD+KPEN L ++ ++K DFGLS F K
Sbjct: 145 ECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK 204
Query: 273 FQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
+D +G+AYY+APEVLK+K + DVWS GVI YILLCG PF + + I K+V + K
Sbjct: 205 LRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKY 264
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG---DASEIPIDISVL 389
F W +IS+ AK+ +K +L D R TA +AL+ W+++ + S+ L
Sbjct: 265 YFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGAL 324
Query: 390 NNMRQFVKYSRLKQFALRALASTLDD-EELADLRDQFDAIDVDKNGSISLEEMRQA--LA 446
+NMR+F +L Q A+ + S L EE +L D F +D + +G + +E+ + +
Sbjct: 325 SNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVL 384
Query: 447 KDLPWKLKESRVLE-----ILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ 501
++ +L E + +E IL+ +D + +G +++SEF++ + L + R +
Sbjct: 385 RNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEE------RLR 438
Query: 502 AAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLL 554
AF FD D+ G IT EEL GL + + +L EAD +KD I EF ++
Sbjct: 439 RAFNLFDTDKSGKITKEELANLFGLTSISEKTWNDVLGEADQNKDNMIDFDEFVSMM 495
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 480
LR F+ D DK+G I+ EE+ + E ++L D N D ++DF EFV+
Sbjct: 437 LRRAFNLFDTDKSGKITKEELANLFG---LTSISEKTWNDVLGEADQNKDNMIDFDEFVS 493
Query: 481 ATLHVHQLEEHDS 493
+H++ +H +
Sbjct: 494 M---MHKICDHKT 503
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 208 bits (529), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 160/283 (56%), Gaps = 27/283 (9%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDV---KREVKI 149
D ++ YT+ +G G +G +A K R A KKI K VEDV K+E++I
Sbjct: 23 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPK------YFVEDVDRFKQEIEI 76
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
+++L H N+++ Y FED+ +Y+ MELC GGEL +R++ K +
Sbjct: 77 MKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV---------------- 119
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 269
+ E DAA +++ +L A CH + HRD+KPENFLF + DS LK DFGL+ KP
Sbjct: 120 -FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 178
Query: 270 GKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329
GK + VG+ YYV+P+VL+ GPE D WS GV+ Y+LLCG PF T+ + ++
Sbjct: 179 GKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE 238
Query: 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
F K W ++S A+ +++LL K P+ R+T+ QAL H W
Sbjct: 239 GTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEW 281
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 160/283 (56%), Gaps = 27/283 (9%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDV---KREVKI 149
D ++ YT+ +G G +G +A K R A KKI K VEDV K+E++I
Sbjct: 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPK------YFVEDVDRFKQEIEI 59
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
+++L H N+++ Y FED+ +Y+ MELC GGEL +R++ K +
Sbjct: 60 MKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV---------------- 102
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 269
+ E DAA +++ +L A CH + HRD+KPENFLF + DS LK DFGL+ KP
Sbjct: 103 -FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161
Query: 270 GKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329
GK + VG+ YYV+P+VL+ GPE D WS GV+ Y+LLCG PF T+ + ++
Sbjct: 162 GKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE 221
Query: 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
F K W ++S A+ +++LL K P+ R+T+ QAL H W
Sbjct: 222 GTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEW 264
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 121/320 (37%), Positives = 174/320 (54%), Gaps = 23/320 (7%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+D + + + LG G F +A +KA G AVK I K L ++ E+ +L+
Sbjct: 18 EDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKA--LKGKESSIENEIAVLR 75
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
+ HEN+V + +E N++Y+ M+L GGEL DRI+ K Y
Sbjct: 76 KIK-HENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGF-----------------Y 117
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
TEKDA+ ++RQ+L H G+VHRD+KPEN L+ S E+S + +DFGLS G
Sbjct: 118 TEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD 177
Query: 272 KFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330
G+ YVAPEVL +K ++ D WSIGVI YILLCG PF+D+ + +F+++L+
Sbjct: 178 VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKA 237
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN 390
+ +F W IS+SAKDF++ L+ KDP R T QA HPW+ G A I SV
Sbjct: 238 EYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWI-AGDTALNKNIHESVSA 296
Query: 391 NMRQFVKYSRLKQFALRALA 410
+R+ S+ +Q A A A
Sbjct: 297 QIRKNFAKSKWRQ-AFNATA 315
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/281 (39%), Positives = 156/281 (55%), Gaps = 18/281 (6%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F RY ++LG G FG + DK G AVK I K ++ E + REV++L+ L
Sbjct: 30 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H N++K Y FED Y Y+ E+ GGEL D I+++ R++E
Sbjct: 90 -DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR-----------------KRFSE 131
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
DAA ++RQ+L H + +VHRD+KPEN L +S +D++++ DFGLS + KK
Sbjct: 132 VDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 191
Query: 274 QDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
+D +G+AYY+APEVL + DVWS GVI YILL G PF E I K+V + K
Sbjct: 192 KDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 251
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
F W +S SAKD ++K+L P R++A AL H W++
Sbjct: 252 FELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 292
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/284 (38%), Positives = 158/284 (55%), Gaps = 18/284 (6%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI 149
Y + RY K LG G +G + DK G A+K I+K+ + + EV +
Sbjct: 15 YFQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAV 74
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
L+ L H N++K Y FED Y+ ME+ GGEL D I+ +
Sbjct: 75 LKQL-DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR-----------------Q 116
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 269
+++E DAAV+++Q+L H H +VHRD+KPEN L +S D+ +K DFGLS +
Sbjct: 117 KFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV 176
Query: 270 GKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329
G K ++ +G+AYY+APEVL++K + DVWS GVI YILLCG PF +T+ I K V +
Sbjct: 177 GGKMKERLGTAYYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEK 236
Query: 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
K F W +S+ AK VK +L +P R++A +AL+HPW+
Sbjct: 237 GKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/295 (38%), Positives = 155/295 (52%), Gaps = 27/295 (9%)
Query: 85 RTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK----NKMILPIAV 140
R + + F RY I +LG G FG D+ AVK I K NK
Sbjct: 11 RENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-----DT 65
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSA 200
+ REV++L+ L H N++K + ED + YI EL GGEL D I+
Sbjct: 66 STILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII----------- 113
Query: 201 WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
K R++E DAA +++Q+ H H +VHRD+KPEN L +S ++D +K D
Sbjct: 114 ------KRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIID 167
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTE 320
FGLS + K +D +G+AYY+APEVL+ + DVWS GVI YILL G PF+ K E
Sbjct: 168 FGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNE 227
Query: 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
I K V K F W +IS+ AKD ++K+L P R+TA Q L HPW+++
Sbjct: 228 YDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/295 (38%), Positives = 155/295 (52%), Gaps = 27/295 (9%)
Query: 85 RTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK----NKMILPIAV 140
R + + F RY I +LG G FG D+ AVK I K NK
Sbjct: 11 RENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-----DT 65
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSA 200
+ REV++L+ L H N++K + ED + YI EL GGEL D I+
Sbjct: 66 STILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII----------- 113
Query: 201 WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
K R++E DAA +++Q+ H H +VHRD+KPEN L +S ++D +K D
Sbjct: 114 ------KRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIID 167
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTE 320
FGLS + K +D +G+AYY+APEVL+ + DVWS GVI YILL G PF+ K E
Sbjct: 168 FGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNE 227
Query: 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
I K V K F W +IS+ AKD ++K+L P R+TA Q L HPW+++
Sbjct: 228 YDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 197 bits (502), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 107/279 (38%), Positives = 161/279 (57%), Gaps = 23/279 (8%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+ + ++LG G F ++ + G A+K I+K+ ++E+ E+ +L+ +
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLEN---EIAVLKKIK- 64
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
HEN+V + +E + Y+ M+L GGEL DRIL + + YTEKD
Sbjct: 65 HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGV-----------------YTEKD 107
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
A++V++Q+L H +G+VHRD+KPEN L+ + +E+S + TDFGLS + G
Sbjct: 108 ASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI-MST 166
Query: 276 IVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334
G+ YVAPEVL +K ++ D WSIGVITYILLCG PF+++TE +F+++ +F
Sbjct: 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEF 226
Query: 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
W IS SAKDF+ LL KDP R T +ALSHPW+
Sbjct: 227 ESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWI 265
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 166/307 (54%), Gaps = 22/307 (7%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y +LG G F +A DK VA+K I K L ++ E+ +L + H
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEA--LEGKEGSMENEIAVLHKIK-HP 76
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+V + +E ++Y+ M+L GGEL DRI+ K YTE+DA+
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK-----------------GFYTERDAS 119
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
++ Q+L H G+VHRD+KPEN L+ S EDS + +DFGLS PG
Sbjct: 120 RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC 179
Query: 278 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336
G+ YVAPEVL +K ++ D WSIGVI YILLCG PF+D+ + +F+++L+ + +F
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS 239
Query: 337 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFV 396
W IS+SAKDF++ L+ KDP R T QAL HPW+ G A + I SV +++
Sbjct: 240 PYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNF 298
Query: 397 KYSRLKQ 403
S+ KQ
Sbjct: 299 AKSKWKQ 305
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 119/314 (37%), Positives = 169/314 (53%), Gaps = 23/314 (7%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y +LG G F +A DK VA+K I K L ++ E+ +L + H
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKA--LEGKEGSMENEIAVLHKIK-HP 76
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+V + +E ++Y+ M+L GGEL DRI+ K YTE+DA+
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK-----------------GFYTERDAS 119
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
++ Q+L H G+VHRD+KPEN L+ S EDS + +DFGLS PG
Sbjct: 120 RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC 179
Query: 278 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336
G+ YVAPEVL +K ++ D WSIGVI YILLCG PF+D+ + +F+++L+ + +F
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS 239
Query: 337 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFV 396
W IS+SAKDF++ L+ KDP R T QAL HPW+ G A + I SV +++
Sbjct: 240 PYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI-AGDTALDKNIHQSVSEQIKKNF 298
Query: 397 KYSRLKQFALRALA 410
S+ KQ A A A
Sbjct: 299 AKSKWKQ-AFNATA 311
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 166/307 (54%), Gaps = 22/307 (7%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y +LG G F +A DK VA+K I K L ++ E+ +L + H
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEA--LEGKEGSMENEIAVLHKIK-HP 76
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+V + +E ++Y+ M+L GGEL DRI+ K YTE+DA+
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK-----------------GFYTERDAS 119
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
++ Q+L H G+VHRD+KPEN L+ S EDS + +DFGLS PG
Sbjct: 120 RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC 179
Query: 278 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336
G+ YVAPEVL +K ++ D WSIGVI YILLCG PF+D+ + +F+++L+ + +F
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS 239
Query: 337 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFV 396
W IS+SAKDF++ L+ KDP R T QAL HPW+ G A + I SV +++
Sbjct: 240 PYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNF 298
Query: 397 KYSRLKQ 403
S+ KQ
Sbjct: 299 AKSKWKQ 305
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 110/284 (38%), Positives = 156/284 (54%), Gaps = 23/284 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y +LG G F +A DK VA+K I K L ++ E+ +L + H
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEA--LEGKEGSMENEIAVLHKIK-HP 76
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+V + +E ++Y+ M+L GGEL DRI+ K YTE+DA+
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK-----------------GFYTERDAS 119
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
++ Q+L H G+VHRD+KPEN L+ S EDS + +DFGLS PG
Sbjct: 120 RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC 179
Query: 278 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336
G+ YVAPEVL +K ++ D WSIGVI YILLCG PF+D+ + +F+++L+ + +F
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS 239
Query: 337 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 380
W IS+SAKDF++ L+ KDP R T QAL HPW+ GD +
Sbjct: 240 PYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI--AGDTA 281
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/311 (36%), Positives = 169/311 (54%), Gaps = 27/311 (8%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G Y K A+K ++K + + V+ E+ +L L+ H N++K
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKT-----VDKKIVRTEIGVLLRLS-HPNIIKLK 114
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
FE + + +EL GGEL DRI+ K Y+E+DAA V+Q+
Sbjct: 115 EIFETPTEISLVLELVTGGELFDRIVEK-----------------GYYSERDAADAVKQI 157
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV 283
L A H +G+VHRD+KPEN L+ + D+ LK DFGLS ++ + + G+ Y
Sbjct: 158 LEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYC 217
Query: 284 APEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG-IFKEVLRNKPDFRRKPWPS 341
APE+L+ + GPE D+WS+G+ITYILLCG PF+D+ D +F+ +L + F W
Sbjct: 218 APEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDE 277
Query: 342 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRL 401
+S +AKD V+KL+V DP+ RLT QAL HPWV G A+ + +D + +++F +L
Sbjct: 278 VSLNAKDLVRKLIVLDPKKRLTTFQALQHPWV-TGKAANFVHMD-TAQKKLQEFNARRKL 335
Query: 402 KQFALRALAST 412
K +AS+
Sbjct: 336 KAAVKAVVASS 346
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 161/292 (55%), Gaps = 17/292 (5%)
Query: 85 RTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK 144
R + + D + + LG G FG ++ ++++G +K I K++ +P+ E ++
Sbjct: 11 RENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPM--EQIE 68
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
E+++L++L H N++K + FED + +YI ME CEGGELL+RI++ A
Sbjct: 69 AEIEVLKSL-DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVS-------------A 114
Query: 205 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
+ +E A +++QM+ A H +VH+D+KPEN LF+ S +K DFGL+
Sbjct: 115 QARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174
Query: 265 DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324
+ K + + G+A Y+APEV KR + D+WS GV+ Y LL G PF + + +
Sbjct: 175 ELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQ 234
Query: 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376
++ +P++ + P ++ A D +K++L KDP R +AAQ L H W ++
Sbjct: 235 QKATYKEPNYAVECRP-LTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 152/296 (51%), Gaps = 29/296 (9%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE-----DVK 144
Y K Y + K LG G G +A ++ +VA+K I K K + A E +V+
Sbjct: 10 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 69
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++
Sbjct: 70 TEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVG-------------- 113
Query: 205 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
+ R E + QML H +G++HRD+KPEN L S +ED +K TDFG S
Sbjct: 114 ---NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 170
Query: 265 DFIKPGKKFQDIVGSAYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWD-KT 319
+ + + G+ Y+APEVL D WS+GVI +I L G PF + +T
Sbjct: 171 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 230
Query: 320 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + ++ K +F + W +S A D VKKLLV DP+AR T +AL HPW+++
Sbjct: 231 QVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 152/296 (51%), Gaps = 29/296 (9%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE-----DVK 144
Y K Y + K LG G G +A ++ +VA+K I K K + A E +V+
Sbjct: 4 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 63
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++
Sbjct: 64 TEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVG-------------- 107
Query: 205 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
+ R E + QML H +G++HRD+KPEN L S +ED +K TDFG S
Sbjct: 108 ---NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164
Query: 265 DFIKPGKKFQDIVGSAYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWD-KT 319
+ + + G+ Y+APEVL D WS+GVI +I L G PF + +T
Sbjct: 165 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 224
Query: 320 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + ++ K +F + W +S A D VKKLLV DP+AR T +AL HPW+++
Sbjct: 225 QVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 152/296 (51%), Gaps = 29/296 (9%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE-----DVK 144
Y K Y + K LG G G +A ++ +VA+K I K K + A E +V+
Sbjct: 4 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 63
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++
Sbjct: 64 TEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVG-------------- 107
Query: 205 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
+ R E + QML H +G++HRD+KPEN L S +ED +K TDFG S
Sbjct: 108 ---NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164
Query: 265 DFIKPGKKFQDIVGSAYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWD-KT 319
+ + + G+ Y+APEVL D WS+GVI +I L G PF + +T
Sbjct: 165 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 224
Query: 320 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + ++ K +F + W +S A D VKKLLV DP+AR T +AL HPW+++
Sbjct: 225 QVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 168/320 (52%), Gaps = 27/320 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED---VKREVKILQALA 154
Y + + LG G F G A K I K+ + D ++RE +I + L
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL----SARDHQKLEREARICRLLK 61
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N+V+ +++ ++ + Y+ +L GGEL + I+A+ Y+E
Sbjct: 62 -HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-----------------EYYSEA 103
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-F 273
DA+ ++Q+L CHL+G+VHRD+KPEN L S + +++K DFGL+ ++ ++ +
Sbjct: 104 DASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAW 163
Query: 274 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
G+ Y++PEVL++ G D+W+ GVI YILL G PFWD+ + +++++
Sbjct: 164 FGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAY 223
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNM 392
DF W +++ AKD + K+L +P R+TA++AL HPW+ + + + ++ +
Sbjct: 224 DFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCL 283
Query: 393 RQFVKYSRLKQFALRALAST 412
++F +LK L + +T
Sbjct: 284 KKFNARRKLKGAILTTMLAT 303
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 152/296 (51%), Gaps = 29/296 (9%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE-----DVK 144
Y K Y + K LG G G +A ++ +VA+K I K K + A E +V+
Sbjct: 3 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 62
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++
Sbjct: 63 TEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVG-------------- 106
Query: 205 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
+ R E + QML H +G++HRD+KPEN L S +ED +K TDFG S
Sbjct: 107 ---NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 163
Query: 265 DFIKPGKKFQDIVGSAYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWD-KT 319
+ + + G+ Y+APEVL D WS+GVI +I L G PF + +T
Sbjct: 164 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 223
Query: 320 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + ++ K +F + W +S A D VKKLLV DP+AR T +AL HPW+++
Sbjct: 224 QVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 152/296 (51%), Gaps = 29/296 (9%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE-----DVK 144
Y K Y + K LG G G +A ++ +VA+K I K K + A E +V+
Sbjct: 4 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 63
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++
Sbjct: 64 TEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVG-------------- 107
Query: 205 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
+ R E + QML H +G++HRD+KPEN L S +ED +K TDFG S
Sbjct: 108 ---NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164
Query: 265 DFIKPGKKFQDIVGSAYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWD-KT 319
+ + + G+ Y+APEVL D WS+GVI +I L G PF + +T
Sbjct: 165 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 224
Query: 320 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + ++ K +F + W +S A D VKKLLV DP+AR T +AL HPW+++
Sbjct: 225 QVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 155/282 (54%), Gaps = 23/282 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALA 154
Y +G+ LG GQF K G A K I+K ++ ++ E+++REV IL+ +
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N++ ++ FE+ V + +EL GGEL D FLA K+S TE
Sbjct: 67 -HPNIITLHDIFENKTDVVLILELVSGGELFD---------------FLA-EKES-LTED 108
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
+A ++Q+L H + H D+KPEN L + +K DFG++ I+ G +F
Sbjct: 109 EATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF 168
Query: 274 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF +T+ +
Sbjct: 169 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNY 228
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
DF + + + S AKDF+++LLVKDP+ R+T AQ+L H W++
Sbjct: 229 DFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 166/317 (52%), Gaps = 27/317 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED---VKREVKILQALA 154
Y + + LG G F G A K I K+ + D ++RE +I + L
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL----SARDHQKLEREARICRLLK 61
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N+V+ +++ ++ + Y+ +L GGEL + I+A+ Y+E
Sbjct: 62 -HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-----------------EYYSEA 103
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-F 273
DA+ ++Q+L CHL+G+VHRD+KPEN L S + +++K DFGL+ ++ ++ +
Sbjct: 104 DASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAW 163
Query: 274 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
G+ Y++PEVL++ G D+W+ GVI YILL G PFWD+ + +++++
Sbjct: 164 FGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAY 223
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNM 392
DF W +++ AKD + K+L +P R+TA++AL HPW+ + + + ++ +
Sbjct: 224 DFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCL 283
Query: 393 RQFVKYSRLKQFALRAL 409
++F +LK L +
Sbjct: 284 KKFNARRKLKGAILTTM 300
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 152/296 (51%), Gaps = 29/296 (9%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE-----DVK 144
Y K Y + K LG G G +A ++ +VA++ I K K + A E +V+
Sbjct: 143 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVE 202
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++
Sbjct: 203 TEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVG-------------- 246
Query: 205 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
+ R E + QML H +G++HRD+KPEN L S +ED +K TDFG S
Sbjct: 247 ---NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 303
Query: 265 DFIKPGKKFQDIVGSAYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWD-KT 319
+ + + G+ Y+APEVL D WS+GVI +I L G PF + +T
Sbjct: 304 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 363
Query: 320 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + ++ K +F + W +S A D VKKLLV DP+AR T +AL HPW+++
Sbjct: 364 QVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 419
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 157/288 (54%), Gaps = 23/288 (7%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
+D + Y +G+ LG GQF K G A K I+K ++ ++ E+++REV
Sbjct: 8 EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 67
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ + H N++ ++ FE+ V + +EL GGEL D FLA K+
Sbjct: 68 ILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFD---------------FLA-EKE 110
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFI 267
S TE +A ++Q+L H + H D+KPEN L + +K DFG++ I
Sbjct: 111 S-LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 169
Query: 268 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
+ G +F++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF +T+
Sbjct: 170 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTN 229
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
+ DF + + + S AKDF+++LLVKDP+ R+ AQ+L H W++
Sbjct: 230 ISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 152/296 (51%), Gaps = 29/296 (9%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE-----DVK 144
Y K Y + K LG G G +A ++ +VA++ I K K + A E +V+
Sbjct: 129 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVE 188
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++
Sbjct: 189 TEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVG-------------- 232
Query: 205 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
+ R E + QML H +G++HRD+KPEN L S +ED +K TDFG S
Sbjct: 233 ---NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 289
Query: 265 DFIKPGKKFQDIVGSAYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWD-KT 319
+ + + G+ Y+APEVL D WS+GVI +I L G PF + +T
Sbjct: 290 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 349
Query: 320 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + ++ K +F + W +S A D VKKLLV DP+AR T +AL HPW+++
Sbjct: 350 QVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 158/301 (52%), Gaps = 24/301 (7%)
Query: 77 TGVIPCGKRTDFGYDKD--FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM 134
TG G+ ++F + F Y + + LG G F K G A K I K+
Sbjct: 8 TGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL 67
Query: 135 ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMIS 194
+ ++RE +I + L H N+V+ +++ +++++ Y+ +L GGEL + I+A+
Sbjct: 68 SAR-DFQKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF- 124
Query: 195 TTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254
Y+E DA+ ++Q+L A CH +G+VHR++KPEN L S + +
Sbjct: 125 ----------------YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 168
Query: 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGR 312
++K DFGL+ + + + G+ Y++PEVLK+ S P D+W+ GVI YILL G
Sbjct: 169 AVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP-VDIWACGVILYILLVGY 227
Query: 313 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
PFWD+ + ++ ++ D+ W +++ AK + +L +P+ R+TA QAL PW
Sbjct: 228 PPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW 287
Query: 373 V 373
+
Sbjct: 288 I 288
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 154/282 (54%), Gaps = 23/282 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALA 154
Y +G+ LG GQF K G A K I+K ++ ++ E+++REV IL+ +
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N++ ++ FE+ V + +EL GGEL D FLA K+S TE
Sbjct: 88 -HPNIITLHDIFENKTDVVLILELVSGGELFD---------------FLA-EKES-LTED 129
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
+A ++Q+L H + H D+KPEN L + +K DFG++ I+ G +F
Sbjct: 130 EATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF 189
Query: 274 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF +T+ +
Sbjct: 190 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNY 249
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
DF + + + S AKDF+++LLVKDP+ R+ AQ+L H W++
Sbjct: 250 DFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 172/324 (53%), Gaps = 26/324 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALA 154
Y IG+ LG GQF +K+ G A K I+K + ++ E+++REV IL+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H NV+ ++ +E+ V + +EL GGEL D FLA +K+S +E+
Sbjct: 74 -HHNVITLHDVYENRTDVVLILELVSGGELFD---------------FLA-QKES-LSEE 115
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
+A ++Q+L H + H D+KPEN L +K DFGL+ I+ G +F
Sbjct: 116 EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF 175
Query: 274 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+ +
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY 235
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN-- 390
DF + + S AKDF++KLLVK+ R RLT +AL HPW+ + + SV+N
Sbjct: 236 DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLE 295
Query: 391 NMR-QFVKYSRLKQFALRALASTL 413
N R Q+V+ F++ +L + L
Sbjct: 296 NFRKQYVRRRSKLAFSIVSLCNHL 319
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 172/324 (53%), Gaps = 26/324 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALA 154
Y IG+ LG GQF +K+ G A K I+K + ++ E+++REV IL+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H NV+ ++ +E+ V + +EL GGEL D FLA +K+S +E+
Sbjct: 74 -HHNVITLHDVYENRTDVVLILELVSGGELFD---------------FLA-QKES-LSEE 115
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
+A ++Q+L H + H D+KPEN L +K DFGL+ I+ G +F
Sbjct: 116 EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF 175
Query: 274 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+ +
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY 235
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN-- 390
DF + + S AKDF++KLLVK+ R RLT +AL HPW+ + + SV+N
Sbjct: 236 DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLE 295
Query: 391 NMR-QFVKYSRLKQFALRALASTL 413
N R Q+V+ F++ +L + L
Sbjct: 296 NFRKQYVRRRSKLAFSIVSLCNHL 319
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 166/324 (51%), Gaps = 32/324 (9%)
Query: 61 QQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN 120
++L Q + T + + P + D+ K+F ++Y ++G G +A
Sbjct: 59 KKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRAT 118
Query: 121 GDRVAVKKIEKN-KMILPIAVEDVK----REVKILQALAGHENVVKFYNAFEDDNYVYIA 175
G AVK +E + + P +E+V+ RE IL+ +AGH +++ +++E +++++
Sbjct: 119 GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178
Query: 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGL 235
+L GEL D + K+ +EK+ ++R +L + H + +
Sbjct: 179 FDLMRKGELFDYLTEKVA-----------------LSEKETRSIMRSLLEAVSFLHANNI 221
Query: 236 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--- 292
VHRD+KPEN L ++ ++ +DFG S ++PG+K +++ G+ Y+APE+LK
Sbjct: 222 VHRDLKPENILLD---DNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDET 278
Query: 293 ----GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 348
G E D+W+ GVI + LL G PFW + + + + ++ + F W S++ KD
Sbjct: 279 HPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKD 338
Query: 349 FVKKLLVKDPRARLTAAQALSHPW 372
+ +LL DP ARLTA QAL HP+
Sbjct: 339 LISRLLQVDPEARLTAEQALQHPF 362
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/313 (34%), Positives = 165/313 (52%), Gaps = 24/313 (7%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ + H NV+ + +E+ V + +EL GGEL D FLA K+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD---------------FLA-EKE 109
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFI 267
S TE++A ++Q+L H + H D+KPEN L +K DFGL+ I
Sbjct: 110 S-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 268 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
G +F++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDI 386
V +F + + + S AKDF+++LLVKDP+ R+T +L HPW++ +
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKA 288
Query: 387 SVLNNMRQFVKYS 399
S + NM +F K++
Sbjct: 289 SAV-NMEKFKKFA 300
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 172/324 (53%), Gaps = 26/324 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALA 154
Y IG+ LG GQF +K+ G A K I+K + ++ E+++REV IL+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H NV+ ++ +E+ V + +EL GGEL D FLA +K+S +E+
Sbjct: 74 -HHNVITLHDVYENRTDVVLILELVSGGELFD---------------FLA-QKES-LSEE 115
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
+A ++Q+L H + H D+KPEN L +K DFGL+ I+ G +F
Sbjct: 116 EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF 175
Query: 274 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+ +
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY 235
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN-- 390
DF + + S AKDF++KLLVK+ R RLT +AL HPW+ + + SV+N
Sbjct: 236 DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLE 295
Query: 391 NMR-QFVKYSRLKQFALRALASTL 413
N R Q+V+ F++ +L + L
Sbjct: 296 NFRKQYVRRRWKLSFSIVSLCNHL 319
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 151/285 (52%), Gaps = 27/285 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED---VKREVKIL 150
F Y + + LG G F G A K I K+ + D ++RE +I
Sbjct: 20 FQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKL----SARDHQKLEREARIC 75
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
+ L H N+V+ +++ ++ + Y+ +L GGEL + I+A+
Sbjct: 76 RLLK-HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR-----------------EY 117
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
Y+E DA+ ++Q+L CH G+VHRD+KPEN L S + +++K DFGL+ ++
Sbjct: 118 YSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGE 177
Query: 271 KK-FQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
++ + G+ Y++PEVL++ G D+W+ GVI YILL G PFWD+ + +++++
Sbjct: 178 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIK 237
Query: 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
DF W +++ AKD + K+L +P R+TAA+AL HPW+
Sbjct: 238 AGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI 282
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 150/282 (53%), Gaps = 22/282 (7%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F Y + + LG G F K G A K I K+ + ++RE +I + L
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKL 62
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H N+V+ +++ +++++ Y+ +L GGEL + I+A+ Y+E
Sbjct: 63 Q-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF-----------------YSE 104
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
DA+ ++Q+L A CH +G+VHR++KPEN L S + +++K DFGL+ + + +
Sbjct: 105 ADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 164
Query: 274 QDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331
G+ Y++PEVLK+ S P D+W+ GVI YILL G PFWD+ + ++ ++
Sbjct: 165 HGFAGTPGYLSPEVLKKDPYSKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 223
Query: 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
D+ W +++ AK + +L +P+ R+TA QAL PW+
Sbjct: 224 YDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 172/324 (53%), Gaps = 26/324 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALA 154
Y IG+ LG GQF +K+ G A K I+K + ++ E+++REV IL+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H NV+ ++ +E+ V + +EL GGEL D FLA +K+S +E+
Sbjct: 74 -HHNVITLHDVYENRTDVVLILELVSGGELFD---------------FLA-QKES-LSEE 115
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
+A ++Q+L H + H D+KPEN L +K DFGL+ I+ G +F
Sbjct: 116 EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF 175
Query: 274 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+ +
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY 235
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN-- 390
DF + + S AKDF++KLLVK+ R RLT +AL HPW+ + + SV+N
Sbjct: 236 DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLE 295
Query: 391 NMR-QFVKYSRLKQFALRALASTL 413
N R Q+V+ F++ +L + L
Sbjct: 296 NFRKQYVRRRWKLDFSIVSLCNHL 319
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 155/288 (53%), Gaps = 23/288 (7%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ + H NV+ + +E+ V + +EL GGEL D FLA K+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD---------------FLA-EKE 109
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFI 267
S TE++A ++Q+L H + H D+KPEN L +K DFGL+ I
Sbjct: 110 S-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 268 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
G +F++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
V +F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 150/282 (53%), Gaps = 22/282 (7%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F Y + + LG G F K G A K I K+ + ++RE +I + L
Sbjct: 3 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKL 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H N+V+ +++ +++++ Y+ +L GGEL + I+A+ Y+E
Sbjct: 62 Q-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF-----------------YSE 103
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
DA+ ++Q+L A CH +G+VHR++KPEN L S + +++K DFGL+ + + +
Sbjct: 104 ADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 163
Query: 274 QDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331
G+ Y++PEVLK+ S P D+W+ GVI YILL G PFWD+ + ++ ++
Sbjct: 164 HGFAGTPGYLSPEVLKKDPYSKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 222
Query: 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
D+ W +++ AK + +L +P+ R+TA QAL PW+
Sbjct: 223 YDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 264
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 155/288 (53%), Gaps = 23/288 (7%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ + H NV+ + +E+ V + +EL GGEL D FLA K+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD---------------FLA-EKE 109
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFI 267
S TE++A ++Q+L H + H D+KPEN L +K DFGL+ I
Sbjct: 110 S-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 268 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
G +F++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+
Sbjct: 169 DFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
V +F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 150/282 (53%), Gaps = 22/282 (7%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F Y + + LG G F K G A K I K+ + ++RE +I + L
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKL 62
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H N+V+ +++ +++++ Y+ +L GGEL + I+A+ Y+E
Sbjct: 63 Q-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF-----------------YSE 104
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
DA+ ++Q+L A CH +G+VHR++KPEN L S + +++K DFGL+ + + +
Sbjct: 105 ADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 164
Query: 274 QDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331
G+ Y++PEVLK+ S P D+W+ GVI YILL G PFWD+ + ++ ++
Sbjct: 165 HGFAGTPGYLSPEVLKKDPYSKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 223
Query: 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
D+ W +++ AK + +L +P+ R+TA QAL PW+
Sbjct: 224 YDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 152/281 (54%), Gaps = 23/281 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALA 154
Y IG+ LG GQF +K+ G A K I+K + + E+++REV IL+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N++ ++ +E+ V + +EL GGEL D FLA +K+S +E+
Sbjct: 74 -HPNIITLHDVYENRTDVVLILELVSGGELFD---------------FLA-QKES-LSEE 115
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
+A ++Q+L H + H D+KPEN L +K DFGL+ I+ G +F
Sbjct: 116 EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF 175
Query: 274 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+ +
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY 235
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
DF + + S AKDF++KLLVK+ R RLT +AL HPW+
Sbjct: 236 DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/281 (36%), Positives = 153/281 (54%), Gaps = 23/281 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALA 154
Y IG+ LG GQF +K+ G A K I+K + ++ E+++REV IL+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H NV+ ++ +E+ V + +EL GGEL D FLA +K+S +E+
Sbjct: 74 -HHNVITLHDVYENRTDVVLILELVSGGELFD---------------FLA-QKES-LSEE 115
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
+A ++Q+L H + H D+KPEN L +K DFGL+ I+ G +F
Sbjct: 116 EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF 175
Query: 274 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+ +
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY 235
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
DF + + S AKDF++KLLVK+ R RLT +AL HPW+
Sbjct: 236 DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 175/350 (50%), Gaps = 33/350 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED---VKREVKIL 150
F Y + + LG G F G A I K+ + D ++RE +I
Sbjct: 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL----SARDHQKLEREARIC 64
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
+ L H N+V+ +++ ++ + Y+ +L GGEL + I+A+
Sbjct: 65 RLLK-HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR-----------------EY 106
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
Y+E DA+ ++Q+L CH G+VHR++KPEN L S + +++K DFGL+ ++
Sbjct: 107 YSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166
Query: 271 KK-FQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
++ + G+ Y++PEVL++ G D+W+ GVI YILL G PFWD+ + +++++
Sbjct: 167 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIK 226
Query: 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISV 388
DF W +++ AKD + K+L +P R+TAA+AL HPW+ +
Sbjct: 227 AGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQET 286
Query: 389 LNNMRQFVKYSRLKQFALRALAST----LDDEELADLRDQFDAIDVDKNG 434
++ +++F +LK L + +T + +E+ + +Q I+ NG
Sbjct: 287 VDCLKKFNARRKLKGAILTVMLATRNFSVRKQEIIKVTEQL--IEAISNG 334
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 155/288 (53%), Gaps = 23/288 (7%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ + H NV+ + +E+ V + +EL GGEL D FLA K+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD---------------FLA-EKE 109
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFI 267
S TE++A ++Q+L H + H D+KPEN L +K DFGL+ I
Sbjct: 110 S-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 268 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
G +F++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
V +F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 155/288 (53%), Gaps = 23/288 (7%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ + H NV+ + +E+ V + +EL GGEL D FLA K+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD---------------FLA-EKE 109
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFI 267
S TE++A ++Q+L H + H D+KPEN L +K DFGL+ I
Sbjct: 110 S-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 268 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
G +F++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
V +F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 155/288 (53%), Gaps = 23/288 (7%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ + H NV+ + +E+ V + +EL GGEL D FLA K+
Sbjct: 66 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD---------------FLA-EKE 108
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFI 267
S TE++A ++Q+L H + H D+KPEN L +K DFGL+ I
Sbjct: 109 S-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167
Query: 268 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
G +F++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+
Sbjct: 168 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 227
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
V +F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 228 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 155/288 (53%), Gaps = 23/288 (7%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ + H NV+ + +E+ V + +EL GGEL D FLA K+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD---------------FLA-EKE 109
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFI 267
S TE++A ++Q+L H + H D+KPEN L +K DFGL+ I
Sbjct: 110 S-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 268 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
G +F++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
V +F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 155/288 (53%), Gaps = 23/288 (7%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ + H NV+ + +E+ V + +EL GGEL D FLA K+
Sbjct: 66 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD---------------FLA-EKE 108
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFI 267
S TE++A ++Q+L H + H D+KPEN L +K DFGL+ I
Sbjct: 109 S-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167
Query: 268 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
G +F++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+
Sbjct: 168 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 227
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
V +F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 228 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 155/288 (53%), Gaps = 23/288 (7%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ + H NV+ + +E+ V + +EL GGEL D FLA K+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD---------------FLA-EKE 109
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFI 267
S TE++A ++Q+L H + H D+KPEN L +K DFGL+ I
Sbjct: 110 S-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 268 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
G +F++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
V +F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 155/288 (53%), Gaps = 23/288 (7%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ + H NV+ + +E+ V + +EL GGEL D FLA K+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD---------------FLA-EKE 109
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFI 267
S TE++A ++Q+L H + H D+KPEN L +K DFGL+ I
Sbjct: 110 S-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 268 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
G +F++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
V +F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 155/288 (53%), Gaps = 23/288 (7%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ + H NV+ + +E+ V + +EL GGEL D FLA K+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD---------------FLA-EKE 109
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFI 267
S TE++A ++Q+L H + H D+KPEN L +K DFGL+ I
Sbjct: 110 S-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 268 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
G +F++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
V +F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 157/291 (53%), Gaps = 34/291 (11%)
Query: 92 KDFD---RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
KD+D + Y + + +G G F +A G+ VA+K ++KN L + +K E++
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNT--LGSDLPRIKTEIE 60
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
L+ L H+++ + Y+ E N +++ +E C GGEL D I+++
Sbjct: 61 ALKNLR-HQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQ----------------- 102
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
R +E++ VV RQ++ A H G HRD+KPEN LF E LK DFGL K
Sbjct: 103 DRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFD---EYHKLKLIDFGLCAKPK 159
Query: 269 PGKKF--QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324
K + Q GS Y APE+++ KS G E+DVWS+G++ Y+L+CG PF D ++
Sbjct: 160 GNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALY 219
Query: 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
K+++R K D + W +S S+ ++++L DP+ R++ L+HPW+ +
Sbjct: 220 KKIMRGKYDVPK--W--LSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQ 266
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 162/310 (52%), Gaps = 27/310 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED---VKREVKILQALA 154
Y + + +G G F G A K I K+ + D ++RE +I + L
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKL----SARDHQKLEREARICRLLK 61
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N+V+ +++ ++ + Y+ +L GGEL + I+A+ Y+E
Sbjct: 62 -HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-----------------EYYSEA 103
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-F 273
DA+ ++Q+L CH G+VHRD+KPEN L S + +++K DFGL+ ++ ++ +
Sbjct: 104 DASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAW 163
Query: 274 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
G+ Y++PEVL++++ G D+W+ GVI YILL G PFWD+ + +++++
Sbjct: 164 FGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAY 223
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNM 392
DF W +++ AK+ + ++L +P R+TA +AL HPWV + + + + +
Sbjct: 224 DFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECL 283
Query: 393 RQFVKYSRLK 402
++F +LK
Sbjct: 284 KKFNARRKLK 293
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 173/331 (52%), Gaps = 31/331 (9%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP--IAVEDVKREVK 148
D F+ Y + +++G G F ++ G + AVK ++ K ++ ED+KRE
Sbjct: 19 DVLFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 78
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
I L H ++V+ + D +Y+ E +G +L I+ + A F+
Sbjct: 79 ICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKR------ADAGFV----- 126
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL----- 263
Y+E A+ +RQ+L CH + ++HRD+KPEN L S + + +K DFG+
Sbjct: 127 --YSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG 184
Query: 264 -SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED 321
S + G+ VG+ +++APEV+KR+ G DVW GVI +ILL G PF+ T++
Sbjct: 185 ESGLVAGGR-----VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKE 238
Query: 322 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
+F+ +++ K + W IS SAKD V+++L+ DP R+T +AL+HPW++E D
Sbjct: 239 RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKE-RDRYA 297
Query: 382 IPIDI-SVLNNMRQFVKYSRLKQFALRALAS 411
I + + +R+F +LK L A++S
Sbjct: 298 YKIHLPETVEQLRKFNARRKLKGAVLAAVSS 328
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 153/294 (52%), Gaps = 33/294 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKI----EKNKMILPIAVEDVKREVKILQAL 153
Y I + LG G FG + T++A G+ A K + E +K E V++E++ + L
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK-------ETVRKEIQTMSVL 105
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H +V ++AFEDDN + + E GGEL +++ + ++ +E
Sbjct: 106 R-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH----------------NKMSE 148
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
+A +RQ+ + H + VH D+KPEN +F + K + LK DFGL+ + P +
Sbjct: 149 DEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMF-TTKRSNELKLIDFGLTAHLDPKQSV 207
Query: 274 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
+ G+A + APEV + K G +D+WS+GV++YILL G PF + +D + V
Sbjct: 208 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW 267
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG---GDASEIP 383
+ + IS KDF++KLL+ DP R+T QAL HPW+ G G S+IP
Sbjct: 268 NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIP 321
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 155/288 (53%), Gaps = 23/288 (7%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG G+F +K+ G + A K I+K + ++ ED++REV
Sbjct: 7 ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ + H NV+ + +E+ V + +EL GGEL D FLA K+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD---------------FLA-EKE 109
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFI 267
S TE++A ++Q+L H + H D+KPEN L +K DFGL+ I
Sbjct: 110 S-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 268 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
G +F++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
V +F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 154/288 (53%), Gaps = 23/288 (7%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ + H NV+ + +E+ V + EL GGEL D FLA K+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILIGELVAGGELFD---------------FLA-EKE 109
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFI 267
S TE++A ++Q+L H + H D+KPEN L +K DFGL+ I
Sbjct: 110 S-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 268 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
G +F++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
V +F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 153/294 (52%), Gaps = 33/294 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKI----EKNKMILPIAVEDVKREVKILQAL 153
Y I + LG G FG + T++A G+ A K + E +K E V++E++ + L
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK-------ETVRKEIQTMSVL 211
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H +V ++AFEDDN + + E GGEL +++ + ++ +E
Sbjct: 212 R-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVA----------------DEHNKMSE 254
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
+A +RQ+ + H + VH D+KPEN +F + K + LK DFGL+ + P +
Sbjct: 255 DEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMF-TTKRSNELKLIDFGLTAHLDPKQSV 313
Query: 274 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
+ G+A + APEV + K G +D+WS+GV++YILL G PF + +D + V
Sbjct: 314 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW 373
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG---GDASEIP 383
+ + IS KDF++KLL+ DP R+T QAL HPW+ G G S+IP
Sbjct: 374 NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIP 427
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 154/288 (53%), Gaps = 23/288 (7%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG G F +K+ G + A K I+K + ++ ED++REV
Sbjct: 7 ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ + H NV+ + +E+ V + +EL GGEL D FLA K+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD---------------FLA-EKE 109
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFI 267
S TE++A ++Q+L H + H D+KPEN L +K DFGL+ I
Sbjct: 110 S-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 268 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
G +F++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
V +F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 161/321 (50%), Gaps = 27/321 (8%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED---VKREVKIL 150
F Y + + LG G F K A K I K+ + D ++RE +I
Sbjct: 29 FTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKL----SARDHQKLEREARIC 84
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
+ L H N+V+ +++ ++ + Y+ +L GGEL + I+A+
Sbjct: 85 RLLK-HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-----------------EY 126
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
Y+E DA+ + Q+L H H +VHRD+KPEN L S + +++K DFGL+ ++
Sbjct: 127 YSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGE 186
Query: 271 KK-FQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
++ + G+ Y++PEVL++ G D+W+ GVI YILL G PFWD+ + +++++
Sbjct: 187 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIK 246
Query: 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISV 388
DF W +++ AK+ + ++L +P R+TA QAL HPWV + + +
Sbjct: 247 AGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQET 306
Query: 389 LNNMRQFVKYSRLKQFALRAL 409
+ +R+F +LK L +
Sbjct: 307 VECLRKFNARRKLKGAILTTM 327
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 157/303 (51%), Gaps = 26/303 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y I + LG G FG + +KA G RV V K P+ VK E+ I+ L H
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATG-RVFVAKFINTPY--PLDKYTVKNEISIMNQLH-HP 108
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
++ ++AFED + + +E GGEL DRI A+ D + +E +
Sbjct: 109 KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAE----------------DYKMSEAEVI 152
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+RQ H H +VH D+KPEN + ++ K+ SS+K DFGL+ + P + +
Sbjct: 153 NYMRQACEGLKHMHEHSIVHLDIKPENIMCET-KKASSVKIIDFGLATKLNPDEIVKVTT 211
Query: 278 GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336
+A + APE++ R+ G +D+W+IGV+ Y+LL G PF + + + V R +F
Sbjct: 212 ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDE 271
Query: 337 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP--IDISVLNNMRQ 394
+ S+S AKDF+K LL K+PR RLT AL HPW++ GD S + I S N +RQ
Sbjct: 272 DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK--GDHSNLTSRIPSSRYNKIRQ 329
Query: 395 FVK 397
+K
Sbjct: 330 KIK 332
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 177/346 (51%), Gaps = 33/346 (9%)
Query: 76 QTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI 135
+G++P G D D F+ Y + +++G G F ++ G + AVK ++ K
Sbjct: 8 SSGLVPRGSMAD--DDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFT 65
Query: 136 LP--IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMI 193
++ ED+KRE I L H ++V+ + D +Y+ E +G +L I+ +
Sbjct: 66 SSPGLSTEDLKREASICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKR-- 122
Query: 194 STTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253
A F+ Y+E A+ +RQ+L CH + ++HRD+KP L S +
Sbjct: 123 ----ADAGFV-------YSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENS 171
Query: 254 SSLKATDFGL------SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY 306
+ +K FG+ S + G+ VG+ +++APEV+KR+ G DVW GVI +
Sbjct: 172 APVKLGGFGVAIQLGESGLVAGGR-----VGTPHFMAPEVVKREPYGKPVDVWGCGVILF 226
Query: 307 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 366
ILL G PF+ T++ +F+ +++ K + W IS SAKD V+++L+ DP R+T +
Sbjct: 227 ILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYE 285
Query: 367 ALSHPWVREGGDASEIPIDIS-VLNNMRQFVKYSRLKQFALRALAS 411
AL+HPW++E D I + + +R+F +LK L A++S
Sbjct: 286 ALNHPWLKE-RDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAVSS 330
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 154/318 (48%), Gaps = 52/318 (16%)
Query: 94 FDRRYTI-GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
F+ Y + +LLG G + A NG AVK IEK + V REV+ L
Sbjct: 10 FEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQA---GHSRSRVFREVETLYQ 66
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
G++N+++ FEDD Y+ E +GG +L I +K +
Sbjct: 67 CQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHI-----------------QKQKHFN 109
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 272
E++A+ VVR + H G+ HRD+KPEN L +S ++ S +K DF L +K
Sbjct: 110 EREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNS 169
Query: 273 FQDI--------VGSAYYVAPEVLKRKSGPES------DVWSIGVITYILLCGRRPF--- 315
I GSA Y+APEV++ + + D+WS+GV+ YI+L G PF
Sbjct: 170 CTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGH 229
Query: 316 ------WDKTE------DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 363
WD+ E + +F+ + K +F K W IS+ AKD + KLLV+D + RL+
Sbjct: 230 CGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLS 289
Query: 364 AAQALSHPWVREGGDASE 381
AAQ L HPWV+ G A E
Sbjct: 290 AAQVLQHPWVQ--GQAPE 305
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 157/319 (49%), Gaps = 35/319 (10%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM--ILPIAVEDVKREVKIL 150
+ ++Y + +G G +G VA + A+K + KNK+ I P VE +K EV+++
Sbjct: 23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLM 82
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAW--------- 201
+ L H N+ + Y +ED+ Y+ + MELC GG LLD++ + +T A
Sbjct: 83 KKLH-HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICP 141
Query: 202 ------------FLAIRKDSRYTEKDAAV--VVRQMLRVAAECHLHGLVHRDMKPENFLF 247
R+ + +++ + ++RQ+ H G+ HRD+KPENFLF
Sbjct: 142 CPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLF 201
Query: 248 KSAKEDSSLKATDFGLS-DFIK--PGKKFQDIV--GSAYYVAPEVLKRKS---GPESDVW 299
S + +K DFGLS +F K G+ + G+ Y+VAPEVL + GP+ D W
Sbjct: 202 -STNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAW 260
Query: 300 SIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR 359
S GV+ ++LL G PF + +VL K F + +S A+D + LL ++
Sbjct: 261 SAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVD 320
Query: 360 ARLTAAQALSHPWVREGGD 378
R A +AL HPW+ + D
Sbjct: 321 ERFDAMRALQHPWISQFSD 339
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 170/331 (51%), Gaps = 31/331 (9%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP--IAVEDVKREVK 148
D F+ Y + +++G G F ++ G + AVK ++ K ++ ED+KRE
Sbjct: 19 DVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 78
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
I L H ++V+ + D +Y+ E +G +L I+ + A F+
Sbjct: 79 ICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKR------ADAGFV----- 126
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL----- 263
Y+E A+ +RQ+L CH + ++HRD+KP L S + + +K FG+
Sbjct: 127 --YSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG 184
Query: 264 -SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED 321
S + G+ VG+ +++APEV+KR+ G DVW GVI +ILL G PF+ T++
Sbjct: 185 ESGLVAGGR-----VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKE 238
Query: 322 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
+F+ +++ K + W IS SAKD V+++L+ DP R+T +AL+HPW++E D
Sbjct: 239 RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKE-RDRYA 297
Query: 382 IPIDI-SVLNNMRQFVKYSRLKQFALRALAS 411
I + + +R+F +LK L A++S
Sbjct: 298 YKIHLPETVEQLRKFNARRKLKGAVLAAVSS 328
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 147/279 (52%), Gaps = 28/279 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ +G LLG G F Y A G VA+K I+K M V+ V+ EVKI L H
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK-HP 71
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
++++ YN FED NYVY+ +E+C GE ++R L + ++E +A
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGE-MNRYLKNRVKP---------------FSENEAR 115
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDI 276
+ Q++ H HG++HRD+ N L + ++K DFGL+ +K P +K +
Sbjct: 116 HFMHQIITGMLYLHSHGILHRDLTLSNLLL---TRNMNIKIADFGLATQLKMPHEKHYTL 172
Query: 277 VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF-WDKTEDGIFKEVLRNKPDF 334
G+ Y++PE+ R + G ESDVWS+G + Y LL GR PF D ++ + K VL D+
Sbjct: 173 CGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVL---ADY 229
Query: 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
+ SI AKD + +LL ++P RL+ + L HP++
Sbjct: 230 EMPSFLSI--EAKDLIHQLLRRNPADRLSLSSVLDHPFM 266
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 26/282 (9%)
Query: 98 YTIGK--LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
YT+ K +LG G+FG + + A G ++A K I+ M E+VK E+ ++ L
Sbjct: 89 YTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMK---DKEEVKNEISVMNQL-D 144
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
H N+++ Y+AFE N + + ME +GGEL DRI I + TE D
Sbjct: 145 HANLIQLYDAFESKNDIVLVMEYVDGGELFDRI----------------IDESYNLTELD 188
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
+ ++Q+ H ++H D+KPEN L + ++ +K DFGL+ KP +K +
Sbjct: 189 TILFMKQICEGIRHMHQMYILHLDLKPENILCVN-RDAKQIKIIDFGLARRYKPREKLKV 247
Query: 276 IVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
G+ ++APEV+ S P +D+WS+GVI Y+LL G PF + +L + D
Sbjct: 248 NFGTPEFLAPEVVNYDFVSFP-TDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWD 306
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + IS AK+F+ KLL+K+ R++A++AL HPW+ +
Sbjct: 307 LEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSD 348
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 144/304 (47%), Gaps = 34/304 (11%)
Query: 78 GVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP 137
G++P G + F Y + + +G G + KA AVK I+K+K
Sbjct: 13 GLVPRGSHMNL----VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK---- 64
Query: 138 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTL 197
D E++IL H N++ + ++D +VY+ EL GGELLD+IL
Sbjct: 65 ---RDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL-------- 113
Query: 198 TSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF-KSAKEDSSL 256
+ ++E++A+ V+ + + H G+VHRD+KP N L+ + L
Sbjct: 114 ---------RQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECL 164
Query: 257 KATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 314
+ DFG + ++ +A +VAPEVLKR+ E D+WS+G++ Y +L G P
Sbjct: 165 RICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
Query: 315 FWDKTEDG---IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 371
F + D I + K W ++S +AKD V K+L DP RLTA Q L HP
Sbjct: 225 FANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHP 284
Query: 372 WVRE 375
WV +
Sbjct: 285 WVTQ 288
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 131/242 (54%), Gaps = 27/242 (11%)
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSA 200
E +EV IL+ ++GH N+++ + +E + + ++ +L + GEL D + K+ TL+
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV---TLS-- 122
Query: 201 WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
EK+ ++R +L V H +VHRD+KPEN L +D ++K TD
Sbjct: 123 ------------EKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNIKLTD 167
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-------GPESDVWSIGVITYILLCGRR 313
FG S + PG+K +++ G+ Y+APE+++ G E D+WS GVI Y LL G
Sbjct: 168 FGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP 227
Query: 314 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
PFW + + + + ++ F W S++ KD V + LV P+ R TA +AL+HP+
Sbjct: 228 PFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
Query: 374 RE 375
++
Sbjct: 288 QQ 289
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 131/242 (54%), Gaps = 27/242 (11%)
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSA 200
E +EV IL+ ++GH N+++ + +E + + ++ +L + GEL D + K+ TL+
Sbjct: 55 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV---TLS-- 109
Query: 201 WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
EK+ ++R +L V H +VHRD+KPEN L +D ++K TD
Sbjct: 110 ------------EKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNIKLTD 154
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-------GPESDVWSIGVITYILLCGRR 313
FG S + PG+K +++ G+ Y+APE+++ G E D+WS GVI Y LL G
Sbjct: 155 FGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP 214
Query: 314 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
PFW + + + + ++ F W S++ KD V + LV P+ R TA +AL+HP+
Sbjct: 215 PFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 274
Query: 374 RE 375
++
Sbjct: 275 QQ 276
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 140/286 (48%), Gaps = 30/286 (10%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F Y + + +G G + KA AVK I+K+K D E++IL
Sbjct: 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-------RDPTEEIEILLRY 72
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H N++ + ++D YVY+ EL +GGELLD+IL + ++E
Sbjct: 73 GQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL-----------------RQKFFSE 115
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF-KSAKEDSSLKATDFGLSDFIKP-GK 271
++A+ V+ + + H G+VHRD+KP N L+ + S++ DFG + ++
Sbjct: 116 REASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175
Query: 272 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW---DKTEDGIFKEV 327
+A +VAPEVL+R+ D+WS+GV+ Y +L G PF D T + I +
Sbjct: 176 LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARI 235
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
K W S+S++AKD V K+L DP RLTAA L HPW+
Sbjct: 236 GSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 130/242 (53%), Gaps = 27/242 (11%)
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSA 200
E +EV IL+ ++GH N+++ + +E + + ++ +L + GEL D + K+ TL+
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV---TLS-- 122
Query: 201 WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
EK+ ++R +L V H +VHRD+KPEN L +D ++K TD
Sbjct: 123 ------------EKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNIKLTD 167
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-------GPESDVWSIGVITYILLCGRR 313
FG S + PG+K + + G+ Y+APE+++ G E D+WS GVI Y LL G
Sbjct: 168 FGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP 227
Query: 314 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
PFW + + + + ++ F W S++ KD V + LV P+ R TA +AL+HP+
Sbjct: 228 PFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
Query: 374 RE 375
++
Sbjct: 288 QQ 289
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 138/288 (47%), Gaps = 30/288 (10%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F Y + + +G G + KA AVK I+K+K D E++IL
Sbjct: 25 FSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRY 77
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H N++ + ++D +VY+ EL GGELLD+IL + ++E
Sbjct: 78 GQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL-----------------RQKFFSE 120
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF-KSAKEDSSLKATDFGLSDFIKP-GK 271
++A+ V+ + + H G+VHRD+KP N L+ + L+ DFG + ++
Sbjct: 121 REASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENG 180
Query: 272 KFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDG---IFKEV 327
+A +VAPEVLKR+ E D+WS+G++ Y +L G PF + D I +
Sbjct: 181 LLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRI 240
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
K W ++S +AKD V K+L DP RLTA Q L HPWV +
Sbjct: 241 GSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 143/287 (49%), Gaps = 28/287 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K +G G F +A G VA+K I+K ++ P +++ + REV+I++ L H
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN-PTSLQKLFREVRIMKIL-NHP 71
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+VK + E + +Y+ ME GGE+ D ++A R EK+A
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH-----------------GRMKEKEAR 114
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
RQ++ CH +VHRD+K EN L + D ++K DFG S+ G K
Sbjct: 115 SKFRQIVSAVQYCHQKRIVHRDLKAENLLLDA---DMNIKIADFGFSNEFTVGGKLDTFC 171
Query: 278 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335
GS Y APE+ K+ GPE DVWS+GVI Y L+ G PF + + + VLR K
Sbjct: 172 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---Y 228
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
R P+ +S ++ +K+ LV +P R T Q + W+ G + E+
Sbjct: 229 RIPF-YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDEL 274
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 145/306 (47%), Gaps = 35/306 (11%)
Query: 91 DKDFDRRYTIG---KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
D F + Y + K LG G F K + AVK I K + ++E+
Sbjct: 3 DSPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEI 56
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
L+ GH N+VK + F D + ++ MEL GGEL +RI +K
Sbjct: 57 TALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERI-----------------KK 99
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
++E +A+ ++R+++ + H G+VHRD+KPEN LF ++ +K DFG +
Sbjct: 100 KKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLK 159
Query: 268 KP-GKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWD-------K 318
P + + + +Y APE+L + ES D+WS+GVI Y +L G+ PF
Sbjct: 160 PPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCT 219
Query: 319 TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378
+ I K++ + F + W ++S AKD ++ LL DP RL + + W+++G
Sbjct: 220 SAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQ 279
Query: 379 ASEIPI 384
S P+
Sbjct: 280 LSSNPL 285
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 143/287 (49%), Gaps = 28/287 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K +G G F +A G VA+K I+K ++ P +++ + REV+I++ L H
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN-PTSLQKLFREVRIMKIL-NHP 74
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+VK + E + +Y+ ME GGE+ D ++A R EK+A
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH-----------------GRMKEKEAR 117
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
RQ++ CH +VHRD+K EN L + D ++K DFG S+ G K
Sbjct: 118 SKFRQIVSAVQYCHQKRIVHRDLKAENLLLDA---DMNIKIADFGFSNEFTVGGKLDAFC 174
Query: 278 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335
G+ Y APE+ K+ GPE DVWS+GVI Y L+ G PF + + + VLR K
Sbjct: 175 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---Y 231
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
R P+ +S ++ +K+ LV +P R T Q + W+ G + E+
Sbjct: 232 RIPF-YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDEL 277
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 138/286 (48%), Gaps = 30/286 (10%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F Y + + +G G + KA AVK I+K+K D E++IL
Sbjct: 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSK-------RDPTEEIEILLRY 72
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H N++ + ++D YVY+ EL +GGELLD+IL + ++E
Sbjct: 73 GQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL-----------------RQKFFSE 115
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF-KSAKEDSSLKATDFGLSDFIKPGKK 272
++A+ V+ + + H G+VHRD+KP N L+ + S++ DFG + ++
Sbjct: 116 REASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175
Query: 273 FQDI-VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW---DKTEDGIFKEV 327
+A +VAPEVL+R+ D+WS+GV+ Y L G PF D T + I +
Sbjct: 176 LLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARI 235
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
K W S+S++AKD V K L DP RLTAA L HPW+
Sbjct: 236 GSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 142/287 (49%), Gaps = 28/287 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K +G G F +A G VAVK I+K ++ +++ + REV+I++ L H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN-SSSLQKLFREVRIMKVL-NHP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+VK + E + +Y+ ME GGE+ D ++A R EK+A
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-----------------GRMKEKEAR 116
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
RQ++ CH +VHRD+K EN L + D ++K DFG S+ G K
Sbjct: 117 AKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA---DMNIKIADFGFSNEFTFGNKLDTFC 173
Query: 278 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335
GS Y APE+ K+ GPE DVWS+GVI Y L+ G PF + + + VLR K
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---Y 230
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
R P+ +S ++ +KK L+ +P R T Q + W+ G + E+
Sbjct: 231 RIPF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDEL 276
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 142/287 (49%), Gaps = 28/287 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K +G G F +A G VAVK I+K ++ +++ + REV+I++ L H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN-SSSLQKLFREVRIMKVL-NHP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+VK + E + +Y+ ME GGE+ D ++A R EK+A
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-----------------GRMKEKEAR 116
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
RQ++ CH +VHRD+K EN L + D ++K DFG S+ G K
Sbjct: 117 AKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA---DMNIKIADFGFSNEFTFGNKLDTFC 173
Query: 278 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335
GS Y APE+ K+ GPE DVWS+GVI Y L+ G PF + + + VLR K
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---Y 230
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
R P+ +S ++ +KK L+ +P R T Q + W+ G + E+
Sbjct: 231 RIPF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDEL 276
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 143/300 (47%), Gaps = 33/300 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y +G LG G FG V + G +VAVK + + K+ V ++RE++ L+ L H
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLK-LFRHP 76
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+++K Y + +++ ME GGEL D I K+ R EK++
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYIC-----------------KNGRLDEKESR 119
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ +Q+L CH H +VHRD+KPEN L + + K DFGLS+ + G+ +
Sbjct: 120 RLFQQILSGVDYCHRHMVVHRDLKPENVLLDA---HMNAKIADFGLSNMMSDGEFLRXSC 176
Query: 278 GSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKP 332
GS Y APEV+ + +GPE D+WS GVI Y LLCG PF D +FK++ + P
Sbjct: 177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP 236
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNM 392
+ ++ S +K +L DP R T H W ++ P D S + M
Sbjct: 237 QY-------LNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTM 289
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 143/287 (49%), Gaps = 28/287 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K +G G F +A G VAV+ I+K ++ +++ + REV+I++ L H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLN-SSSLQKLFREVRIMKVL-NHP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+VK + E + +Y+ ME GGE+ D ++A R EK+A
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-----------------GRMKEKEAR 116
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
RQ++ CH +VHRD+K EN L + D ++K DFG S+ G K +
Sbjct: 117 AKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA---DMNIKIADFGFSNEFTFGNKLDEFC 173
Query: 278 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335
GS Y APE+ K+ GPE DVWS+GVI Y L+ G PF + + + VLR K
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---Y 230
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
R P+ +S ++ +KK L+ +P R T Q + W+ G + E+
Sbjct: 231 RIPF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDEL 276
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 142/287 (49%), Gaps = 28/287 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K +G G F +A G VAV+ I+K ++ +++ + REV+I++ L H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLN-SSSLQKLFREVRIMKVL-NHP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+VK + E + +Y+ ME GGE+ D ++A R EK+A
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-----------------GRMKEKEAR 116
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
RQ++ CH +VHRD+K EN L + D ++K DFG S+ G K
Sbjct: 117 AKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA---DMNIKIADFGFSNEFTFGNKLDTFC 173
Query: 278 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335
GS Y APE+ K+ GPE DVWS+GVI Y L+ G PF + + + VLR K
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---Y 230
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
R P+ +S ++ +KK L+ +P R T Q + W+ G + E+
Sbjct: 231 RIPF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDEL 276
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 142/287 (49%), Gaps = 28/287 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K +G G F +A G VAVK I+K ++ +++ + REV+I++ L H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN-SSSLQKLFREVRIMKVL-NHP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+VK + E + +Y+ ME GGE+ D ++A R EK+A
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-----------------GRMKEKEAR 116
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
RQ++ CH +VHRD+K EN L + D ++K DFG S+ G K
Sbjct: 117 AKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA---DMNIKIADFGFSNEFTFGNKLDAFC 173
Query: 278 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335
G+ Y APE+ K+ GPE DVWS+GVI Y L+ G PF + + + VLR K
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---Y 230
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
R P+ +S ++ +KK L+ +P R T Q + W+ G + E+
Sbjct: 231 RIPF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDEL 276
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 142/287 (49%), Gaps = 28/287 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K +G G F +A G VAVK I+K ++ +++ + REV+I++ L H
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN-SSSLQKLFREVRIMKVL-NHP 66
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+VK + E + +Y+ ME GGE+ D ++A W EK+A
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA--------HGWM---------KEKEAR 109
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
RQ++ CH +VHRD+K EN L + D ++K DFG S+ G K
Sbjct: 110 AKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA---DMNIKIADFGFSNEFTFGNKLDTFC 166
Query: 278 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335
GS Y APE+ K+ GPE DVWS+GVI Y L+ G PF + + + VLR K
Sbjct: 167 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---Y 223
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
R P+ +S ++ +KK L+ +P R T Q + W+ G + E+
Sbjct: 224 RIPF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDEL 269
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 136/283 (48%), Gaps = 33/283 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y +G LG G FG + + G +VAVK + + K+ V +KRE++ L+ L H
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LFRHP 71
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+++K Y ++ ME GGEL D I K R E +A
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYIC-----------------KHGRVEEMEAR 114
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ +Q+L CH H +VHRD+KPEN L + + K DFGLS+ + G+ +D
Sbjct: 115 RLFQQILSAVDYCHRHMVVHRDLKPENVLLDA---HMNAKIADFGLSNMMSDGEFLRDSC 171
Query: 278 GSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKP 332
GS Y APEV+ + +GPE D+WS GVI Y LLCG PF D+ +FK++ + P
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP 231
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
++ ++ S + +L DP R T H W ++
Sbjct: 232 EY-------LNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 140/296 (47%), Gaps = 41/296 (13%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G G + G + A+K + + ++EV +G ++V
Sbjct: 16 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSP--------KARQEVDHHWQASGGPHIVC 67
Query: 162 FYNAFEDDNY----VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+ +E+ ++ + I ME EGGEL RI R D +TE++AA
Sbjct: 68 ILDVYENMHHGKRCLLIIMECMEGGELFSRIQE---------------RGDQAFTEREAA 112
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
++R + H H + HRD+KPEN L+ S ++D+ LK TDFG + Q
Sbjct: 113 EIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT-QNALQTPC 171
Query: 278 GSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDKT----EDGIFKEVL 328
+ YYVAPEVL GPE D+WS+GVI YILLCG PF+ T G+ + +
Sbjct: 172 YTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIR 227
Query: 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 384
+ F W +S AK ++ LL DP RLT Q ++HPW+ + + P+
Sbjct: 228 LGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPL 283
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 140/296 (47%), Gaps = 41/296 (13%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G G + G + A+K + + ++EV +G ++V
Sbjct: 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSP--------KARQEVDHHWQASGGPHIVC 86
Query: 162 FYNAFEDDNY----VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+ +E+ ++ + I ME EGGEL RI R D +TE++AA
Sbjct: 87 ILDVYENMHHGKRCLLIIMECMEGGELFSRIQE---------------RGDQAFTEREAA 131
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
++R + H H + HRD+KPEN L+ S ++D+ LK TDFG + Q
Sbjct: 132 EIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT-QNALQTPC 190
Query: 278 GSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDKT----EDGIFKEVL 328
+ YYVAPEVL GPE D+WS+GVI YILLCG PF+ T G+ + +
Sbjct: 191 YTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIR 246
Query: 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 384
+ F W +S AK ++ LL DP RLT Q ++HPW+ + + P+
Sbjct: 247 LGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPL 302
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 139/280 (49%), Gaps = 34/280 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y I + LG G FG +AT +VA+K I + + V+RE+ L+ L H
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR-HP 69
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+++K Y+ + + +E GGEL D I+ K R TE +
Sbjct: 70 HIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEK-----------------KRMTEDEGR 111
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+Q++ CH H +VHRD+KPEN L ++ ++K DFGLS+ + G +
Sbjct: 112 RFFQQIICAIEYCHRHKIVHRDLKPENLLLD---DNLNVKIADFGLSNIMTDGNFLKTSC 168
Query: 278 GSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKP 332
GS Y APEV+ K +GPE DVWS G++ Y++L GR PF D+ +FK+V + P
Sbjct: 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMP 228
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
DF +S A+ +++++V DP R+T + PW
Sbjct: 229 DF-------LSPGAQSLIRRMIVADPMQRITIQEIRRDPW 261
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 145/311 (46%), Gaps = 51/311 (16%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVKILQALAGHENVVK 161
+LG G + AVK IEK P + V REV++L GH NV++
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQ----PGHIRSRVFREVEMLYQCQGHRNVLE 75
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
FE+++ Y+ E GG +L I K + E +A+VVV+
Sbjct: 76 LIEFFEEEDRFYLVFEKMRGGSILSHI-----------------HKRRHFNELEASVVVQ 118
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----- 276
+ H G+ HRD+KPEN L + + S +K DFGL IK I
Sbjct: 119 DVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPEL 178
Query: 277 ---VGSAYYVAPEVLKRKSGPES------DVWSIGVITYILLCGRRPF---------WDK 318
GSA Y+APEV++ S S D+WS+GVI YILL G PF WD+
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDR 238
Query: 319 TE------DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
E + +F+ + K +F K W IS +AKD + KLLV+D + RL+AAQ L HPW
Sbjct: 239 GEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPW 298
Query: 373 VREGGDASEIP 383
V+ + +P
Sbjct: 299 VQGCAPENTLP 309
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 135/283 (47%), Gaps = 33/283 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y +G LG G FG + + G +VAVK + + K+ V +KRE++ L+ L H
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LFRHP 71
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+++K Y ++ ME GGEL D I K R E +A
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYIC-----------------KHGRVEEMEAR 114
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ +Q+L CH H +VHRD+KPEN L + + K DFGLS+ + G+ +
Sbjct: 115 RLFQQILSAVDYCHRHMVVHRDLKPENVLLDA---HMNAKIADFGLSNMMSDGEFLRTSC 171
Query: 278 GSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKP 332
GS Y APEV+ + +GPE D+WS GVI Y LLCG PF D+ +FK++ + P
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP 231
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
++ ++ S + +L DP R T H W ++
Sbjct: 232 EY-------LNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 149/287 (51%), Gaps = 27/287 (9%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVK--KIEKNKMILPIAVEDVKREVKI 149
K+ +Y I + LG G+FG + + ++ K K++ +L VK+E+ I
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL------VKKEISI 54
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
L +A H N++ + +FE + + E G ++ +RI TSA+ L
Sbjct: 55 LN-IARHRNILHLHESFESMEELVMIFEFISGLDIFERIN--------TSAFEL------ 99
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 269
E++ V Q+ H H + H D++PEN ++++ + S++K +FG + +KP
Sbjct: 100 --NEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT-RRSSTIKIIEFGQARQLKP 156
Query: 270 GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
G F+ + + Y APEV + +D+WS+G + Y+LL G PF +T I + ++
Sbjct: 157 GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIM 216
Query: 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ F + + IS A DFV +LLVK+ ++R+TA++AL HPW+++
Sbjct: 217 NAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 140/282 (49%), Gaps = 34/282 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y I K LG G FG +A G +VA+K I K + ++RE+ L+ L H
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+++K Y+ + + + + +E G EL D I+ + + +E++A
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQR-----------------DKMSEQEAR 115
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+Q++ CH H +VHRD+KPEN L E ++K DFGLS+ + G +
Sbjct: 116 RFFQQIISAVEYCHRHKIVHRDLKPENLLLD---EHLNVKIADFGLSNIMTDGNFLKTSC 172
Query: 278 GSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKP 332
GS Y APEV+ K +GPE DVWS GVI Y++LC R PF D++ +FK + + P
Sbjct: 173 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 232
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
F +S A +K++L+ +P R++ + + W +
Sbjct: 233 KF-------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 267
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 140/282 (49%), Gaps = 34/282 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y I K LG G FG +A G +VA+K I K + ++RE+ L+ L H
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HP 74
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+++K Y+ + + + + +E G EL D I+ + + +E++A
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQR-----------------DKMSEQEAR 116
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+Q++ CH H +VHRD+KPEN L E ++K DFGLS+ + G +
Sbjct: 117 RFFQQIISAVEYCHRHKIVHRDLKPENLLLD---EHLNVKIADFGLSNIMTDGNFLKTSC 173
Query: 278 GSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKP 332
GS Y APEV+ K +GPE DVWS GVI Y++LC R PF D++ +FK + + P
Sbjct: 174 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 233
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
F +S A +K++L+ +P R++ + + W +
Sbjct: 234 KF-------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 268
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 144/294 (48%), Gaps = 34/294 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y I K LG G FG +A G +VA+K I K + ++RE+ L+ L H
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HP 64
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+++K Y+ + + + + +E G EL D I+ + + +E++A
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQR-----------------DKMSEQEAR 106
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+Q++ CH H +VHRD+KPEN L E ++K DFGLS+ + G +
Sbjct: 107 RFFQQIISAVEYCHRHKIVHRDLKPENLLLD---EHLNVKIADFGLSNIMTDGNFLKTSC 163
Query: 278 GSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKP 332
GS Y APEV+ K +GPE DVWS GVI Y++LC R PF D++ +FK + + P
Sbjct: 164 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 223
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDI 386
F +S A +K++L+ +P R++ + + W + +P D+
Sbjct: 224 KF-------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEYLLPPDL 270
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 140/282 (49%), Gaps = 34/282 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y I K LG G FG +A G +VA+K I K + ++RE+ L+ L H
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HP 68
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+++K Y+ + + + + +E G EL D I+ + + +E++A
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQR-----------------DKMSEQEAR 110
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+Q++ CH H +VHRD+KPEN L E ++K DFGLS+ + G +
Sbjct: 111 RFFQQIISAVEYCHRHKIVHRDLKPENLLLD---EHLNVKIADFGLSNIMTDGNFLKTSC 167
Query: 278 GSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKP 332
GS Y APEV+ K +GPE DVWS GVI Y++LC R PF D++ +FK + + P
Sbjct: 168 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 227
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
F +S A +K++L+ +P R++ + + W +
Sbjct: 228 KF-------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 262
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 144/311 (46%), Gaps = 51/311 (16%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVKILQALAGHENVVK 161
+LG G + AVK IEK P + V REV++L GH NV++
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQ----PGHIRSRVFREVEMLYQCQGHRNVLE 75
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
FE+++ Y+ E GG +L I K + E +A+VVV+
Sbjct: 76 LIEFFEEEDRFYLVFEKMRGGSILSHI-----------------HKRRHFNELEASVVVQ 118
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----- 276
+ H G+ HRD+KPEN L + + S +K DF L IK I
Sbjct: 119 DVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPEL 178
Query: 277 ---VGSAYYVAPEVLKRKSGPES------DVWSIGVITYILLCGRRPF---------WDK 318
GSA Y+APEV++ S S D+WS+GVI YILL G PF WD+
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDR 238
Query: 319 TE------DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
E + +F+ + K +F K W IS +AKD + KLLV+D + RL+AAQ L HPW
Sbjct: 239 GEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPW 298
Query: 373 VREGGDASEIP 383
V+ + +P
Sbjct: 299 VQGCAPENTLP 309
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 137/287 (47%), Gaps = 28/287 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K +G G F +A G VAVK I+K ++ +++ + REV+I + L H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN-SSSLQKLFREVRIXKVL-NHP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+VK + E + +Y+ E GGE+ D ++A R EK+A
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAH-----------------GRXKEKEAR 116
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
RQ++ CH +VHRD+K EN L + D ++K DFG S+ G K
Sbjct: 117 AKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA---DXNIKIADFGFSNEFTFGNKLDAFC 173
Query: 278 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335
G+ Y APE+ K+ GPE DVWS+GVI Y L+ G PF + + + VLR K
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---Y 230
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
R P+ S ++ +KK L+ +P R T Q W G + E+
Sbjct: 231 RIPF-YXSTDCENLLKKFLILNPSKRGTLEQIXKDRWXNVGHEDDEL 276
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 143/287 (49%), Gaps = 28/287 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K +G G F +A G VAVK I+K ++ P +++ + REV+I++ L H
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLN-PTSLQKLFREVRIMKIL-NHP 74
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+VK + E + +Y+ ME GGE+ D ++A R EK+A
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-----------------GRMKEKEAR 117
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
RQ++ CH +VHRD+K EN L D ++K DFG S+ G K
Sbjct: 118 AKFRQIVSAVQYCHQKYIVHRDLKAENLLLDG---DMNIKIADFGFSNEFTVGNKLDTFC 174
Query: 278 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335
GS Y APE+ K+ GPE DVWS+GVI Y L+ G PF + + + VLR K
Sbjct: 175 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---Y 231
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
R P+ +S ++ +KKLLV +P R + Q + W+ G + E+
Sbjct: 232 RIPF-YMSTDCENLLKKLLVLNPIKRGSLEQIMKDRWMNVGHEEEEL 277
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 149/284 (52%), Gaps = 29/284 (10%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G G +AT +++G VAVKK++ K E + EV I++ HENVV+ Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQ-HENVVEMY 87
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
N++ + +++ ME EGG L D I +R E+ A V +
Sbjct: 88 NSYLVGDELWVVMEFLEGGALTD------------------IVTHTRMNEEQIAAVCLAV 129
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYY 282
L+ + H G++HRD+K ++ L D +K +DFG + K + + +VG+ Y+
Sbjct: 130 LQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 186
Query: 283 VAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 341
+APE++ R GPE D+WS+G++ ++ G P++++ K + N P R K
Sbjct: 187 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHK 245
Query: 342 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV-REGGDASEIPI 384
+S S K F+ +LLV+DP R TAA+ L HP++ + G AS +P+
Sbjct: 246 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPL 289
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 149/284 (52%), Gaps = 29/284 (10%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G G +AT +++G VAVKK++ K E + EV I++ HENVV+ Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQ-HENVVEMY 92
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
N++ + +++ ME EGG L D I +R E+ A V +
Sbjct: 93 NSYLVGDELWVVMEFLEGGALTD------------------IVTHTRMNEEQIAAVCLAV 134
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYY 282
L+ + H G++HRD+K ++ L D +K +DFG + K + + +VG+ Y+
Sbjct: 135 LQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 191
Query: 283 VAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 341
+APE++ R GPE D+WS+G++ ++ G P++++ K + N P R K
Sbjct: 192 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHK 250
Query: 342 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV-REGGDASEIPI 384
+S S K F+ +LLV+DP R TAA+ L HP++ + G AS +P+
Sbjct: 251 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPL 294
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 149/284 (52%), Gaps = 29/284 (10%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G G +AT +++G VAVKK++ K E + EV I++ HENVV+ Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQ-HENVVEMY 94
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
N++ + +++ ME EGG L D I +R E+ A V +
Sbjct: 95 NSYLVGDELWVVMEFLEGGALTD------------------IVTHTRMNEEQIAAVCLAV 136
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYY 282
L+ + H G++HRD+K ++ L D +K +DFG + K + + +VG+ Y+
Sbjct: 137 LQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 193
Query: 283 VAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 341
+APE++ R GPE D+WS+G++ ++ G P++++ K + N P R K
Sbjct: 194 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHK 252
Query: 342 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV-REGGDASEIPI 384
+S S K F+ +LLV+DP R TAA+ L HP++ + G AS +P+
Sbjct: 253 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPL 296
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 149/284 (52%), Gaps = 29/284 (10%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G G +AT +++G VAVKK++ K E + EV I++ HENVV+ Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQ-HENVVEMY 83
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
N++ + +++ ME EGG L D I +R E+ A V +
Sbjct: 84 NSYLVGDELWVVMEFLEGGALTD------------------IVTHTRMNEEQIAAVCLAV 125
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYY 282
L+ + H G++HRD+K ++ L D +K +DFG + K + + +VG+ Y+
Sbjct: 126 LQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 182
Query: 283 VAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 341
+APE++ R GPE D+WS+G++ ++ G P++++ K + N P R K
Sbjct: 183 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHK 241
Query: 342 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV-REGGDASEIPI 384
+S S K F+ +LLV+DP R TAA+ L HP++ + G AS +P+
Sbjct: 242 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPL 285
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 146/281 (51%), Gaps = 28/281 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G G +AT +++G VAVKK++ K E + EV I++ HENVV+ Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQ-HENVVEMY 214
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
N++ + +++ ME EGG L D I +R E+ A V +
Sbjct: 215 NSYLVGDELWVVMEFLEGGALTD------------------IVTHTRMNEEQIAAVCLAV 256
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYY 282
L+ + H G++HRD+K ++ L D +K +DFG + K + + +VG+ Y+
Sbjct: 257 LQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 313
Query: 283 VAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 341
+APE++ R GPE D+WS+G++ ++ G P++++ K + N P R K
Sbjct: 314 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHK 372
Query: 342 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
+S S K F+ +LLV+DP R TAA+ L HP++ + G + I
Sbjct: 373 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASI 413
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 149/284 (52%), Gaps = 29/284 (10%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G G +AT +++G VAVKK++ K E + EV I++ HENVV+ Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQ-HENVVEMY 137
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
N++ + +++ ME EGG L D I +R E+ A V +
Sbjct: 138 NSYLVGDELWVVMEFLEGGALTD------------------IVTHTRMNEEQIAAVCLAV 179
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYY 282
L+ + H G++HRD+K ++ L D +K +DFG + K + + +VG+ Y+
Sbjct: 180 LQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 236
Query: 283 VAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 341
+APE++ R GPE D+WS+G++ ++ G P++++ K + N P R K
Sbjct: 237 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHK 295
Query: 342 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV-REGGDASEIPI 384
+S S K F+ +LLV+DP R TAA+ L HP++ + G AS +P+
Sbjct: 296 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPL 339
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 155/317 (48%), Gaps = 49/317 (15%)
Query: 61 QQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN 120
++L +KQ + + +RQ + +DF+ IG+ LG G+FG Y+A +K +
Sbjct: 15 EELASKQKNEESKKRQWAL------------EDFE----IGRPLGKGKFGNVYLAREKQS 58
Query: 121 GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180
+A+K + K ++ ++REV+I Q+ H N+++ Y F D VY+ +E
Sbjct: 59 KFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAP 117
Query: 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 240
G + + ++K S++ E+ A + ++ + CH ++HRD+
Sbjct: 118 LGTV-----------------YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 160
Query: 241 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVW 299
KPEN L SA E LK DFG S P + D+ G+ Y+ PE+++ R + D+W
Sbjct: 161 KPENLLLGSAGE---LKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLW 216
Query: 300 SIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVK 356
S+GV+ Y L G+ PF T +K + R + PDF ++ A+D + +LL
Sbjct: 217 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARDLISRLLKH 269
Query: 357 DPRARLTAAQALSHPWV 373
+P R + L HPW+
Sbjct: 270 NPSQRPMLREVLEHPWI 286
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 156/341 (45%), Gaps = 43/341 (12%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
++LG G G +K ++ A+K ++ +REV++ + ++V
Sbjct: 73 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 124
Query: 161 KFYNAFED----DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ + +E+ + I ME +GGEL RI R D +TE++A
Sbjct: 125 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD---------------RGDQAFTEREA 169
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 170 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 229
Query: 277 VGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEV 327
+ YYVAPEVL GPE D+WS+GVI YILLCG PF+ G+ +
Sbjct: 230 CYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 285
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 387
+ +F W +S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 286 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 345
Query: 388 -VLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDA 427
VL ++ ++ +K+ ALA+ D E ++ DA
Sbjct: 346 RVLKEDKE--RWEDVKEEMTSALATMRVDYEQIKIKKIEDA 384
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 156/341 (45%), Gaps = 43/341 (12%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
++LG G G +K ++ A+K ++ +REV++ + ++V
Sbjct: 67 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 118
Query: 161 KFYNAFED----DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ + +E+ + I ME +GGEL RI R D +TE++A
Sbjct: 119 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD---------------RGDQAFTEREA 163
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 164 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 223
Query: 277 VGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEV 327
+ YYVAPEVL GPE D+WS+GVI YILLCG PF+ G+ +
Sbjct: 224 CYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 279
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 387
+ +F W +S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 280 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 339
Query: 388 -VLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDA 427
VL ++ ++ +K+ ALA+ D E ++ DA
Sbjct: 340 RVLKEDKE--RWEDVKEEMTSALATMRVDYEQIKIKKIEDA 378
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 156/341 (45%), Gaps = 43/341 (12%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
++LG G G +K ++ A+K ++ +REV++ + ++V
Sbjct: 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 74
Query: 161 KFYNAFED----DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ + +E+ + I ME +GGEL RI R D +TE++A
Sbjct: 75 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD---------------RGDQAFTEREA 119
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 120 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 179
Query: 277 VGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEV 327
+ YYVAPEVL GPE D+WS+GVI YILLCG PF+ G+ +
Sbjct: 180 CYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 235
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 387
+ +F W +S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 236 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 295
Query: 388 -VLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDA 427
VL ++ ++ +K+ ALA+ D E ++ DA
Sbjct: 296 RVLKEDKE--RWEDVKEEMTSALATMRVDYEQIKIKKIEDA 334
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 90/269 (33%), Positives = 131/269 (48%), Gaps = 29/269 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F T +A + A A+K +EK +I V V RE ++ L H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 90
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VK Y F+DD +Y + + GELL I RK + E
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----------------RKIGSFDETCTR 133
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQ 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K
Sbjct: 134 FYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARAN 190
Query: 275 DIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + D
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 250
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL 362
F K +P A+D V+KLLV D RL
Sbjct: 251 FPEKFFP----KARDLVEKLLVLDATKRL 275
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 138/300 (46%), Gaps = 40/300 (13%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
++LG G G +K ++ A+K ++ +REV++ + ++V
Sbjct: 21 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 72
Query: 161 KFYNAFED----DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ + +E+ + I ME +GGEL RI R D +TE++A
Sbjct: 73 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD---------------RGDQAFTEREA 117
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG + +
Sbjct: 118 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEP 177
Query: 277 VGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEV 327
+ YYVAPEVL GPE D+WS+GVI YILLCG PF+ G+ +
Sbjct: 178 CYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 233
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 387
+ +F W +S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 234 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 293
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 140/280 (50%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E G + + ++K S++ E+ A
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTV-----------------YRELQKLSKFDEQRTA 116
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK DFG S P + D+
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTDLC 172
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 232
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 233 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 140/280 (50%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E GE+ + ++K S++ E+ A
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPRGEV-----------------YKELQKLSKFDEQRTA 116
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK DFG S P + +
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTTLC 172
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 232
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 233 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 140/280 (50%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 68
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E G + + ++K S++ E+ A
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTV-----------------YRELQKLSKFDEQRTA 111
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK DFG S P + D+
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTDLC 167
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 227
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 228 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 152/331 (45%), Gaps = 43/331 (12%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
++LG G G +K ++ A+K ++ +REV++ + ++V
Sbjct: 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 74
Query: 161 KFYNAFED----DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ + +E+ + I ME +GGEL RI R D +TE++A
Sbjct: 75 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD---------------RGDQAFTEREA 119
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 120 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 179
Query: 277 VGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEV 327
+ YYVAPEVL GPE D+WS+GVI YILLCG PF+ G+ +
Sbjct: 180 CYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 235
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 387
+ +F W +S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 236 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 295
Query: 388 -VLNNMRQFVKYSRLKQFALRALASTLDDEE 417
VL ++ ++ +K+ ALA+ D E
Sbjct: 296 RVLKEDKE--RWEDVKEEMTSALATMRVDYE 324
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 140/280 (50%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 68
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E G + + ++K S++ E+ A
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTV-----------------YRELQKLSKFDEQRTA 111
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK DFG S P + D+
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTDLC 167
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 227
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 228 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 140/280 (50%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 69
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E G + + ++K S++ E+ A
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTV-----------------YRELQKLSKFDEQRTA 112
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK DFG S P + D+
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTDLC 168
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 228
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 229 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 137/300 (45%), Gaps = 40/300 (13%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
++LG G G +K ++ A+K ++ +REV++ + ++V
Sbjct: 28 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 79
Query: 161 KFYNAFED----DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ + +E+ + I ME +GGEL RI R D +TE++A
Sbjct: 80 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD---------------RGDQAFTEREA 124
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 125 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 184
Query: 277 VGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEV 327
+ YYVAPEVL GPE D+WS+GVI YILLCG PF+ G+ +
Sbjct: 185 CYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 240
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 387
+ +F W +S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 241 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 300
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 137/300 (45%), Gaps = 40/300 (13%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
++LG G G +K ++ A+K ++ +REV++ + ++V
Sbjct: 21 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 72
Query: 161 KFYNAFED----DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ + +E+ + I ME +GGEL RI R D +TE++A
Sbjct: 73 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD---------------RGDQAFTEREA 117
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 118 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 177
Query: 277 VGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEV 327
+ YYVAPEVL GPE D+WS+GVI YILLCG PF+ G+ +
Sbjct: 178 CYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 233
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 387
+ +F W +S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 234 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 293
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 39/280 (13%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I A+
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICI-NAM 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
HENVVKFY + N Y+ +E C GGEL DR I D E
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-----------------IEPDIGMPE 104
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK- 272
DA Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE 161
Query: 273 --FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC----- 215
Query: 329 RNKPDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 363
+ D++ K PW I ++ + K+LV++P AR+T
Sbjct: 216 QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 140/280 (50%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E GE+ + ++K S++ E+ A
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPRGEV-----------------YKELQKLSKFDEQRTA 116
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK DFG S P + +
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRXXLX 172
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 232
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 233 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 137/300 (45%), Gaps = 40/300 (13%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
++LG G G +K ++ A+K ++ +REV++ + ++V
Sbjct: 27 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 78
Query: 161 KFYNAFED----DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ + +E+ + I ME +GGEL RI R D +TE++A
Sbjct: 79 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD---------------RGDQAFTEREA 123
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 124 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 183
Query: 277 VGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEV 327
+ YYVAPEVL GPE D+WS+GVI YILLCG PF+ G+ +
Sbjct: 184 CYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 239
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 387
+ +F W +S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 240 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 299
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 137/300 (45%), Gaps = 40/300 (13%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
++LG G G +K ++ A+K ++ +REV++ + ++V
Sbjct: 22 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 73
Query: 161 KFYNAFED----DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ + +E+ + I ME +GGEL RI R D +TE++A
Sbjct: 74 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD---------------RGDQAFTEREA 118
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 119 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 178
Query: 277 VGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEV 327
+ YYVAPEVL GPE D+WS+GVI YILLCG PF+ G+ +
Sbjct: 179 CYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 234
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 387
+ +F W +S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 235 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 294
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 140/293 (47%), Gaps = 24/293 (8%)
Query: 88 FGYDKDFDRRYTI-GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKRE 146
F ++F+ Y + K LG G+F K+ G A K ++K + E + E
Sbjct: 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAE-ILHE 78
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRIL---AKMISTTLTSAWFL 203
+ +L+ V+ + +E+ + + + +E GGE+ L A+M+S
Sbjct: 79 IAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVS--------- 129
Query: 204 AIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263
E D +++Q+L H + +VH D+KP+N L S +K DFG+
Sbjct: 130 ---------ENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGM 180
Query: 264 SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG 322
S I + ++I+G+ Y+APE+L +D+W+IG+I Y+LL PF +
Sbjct: 181 SRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE 240
Query: 323 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + + D+ + + S+S A DF++ LLVK+P R TA LSH W+++
Sbjct: 241 TYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 137/299 (45%), Gaps = 40/299 (13%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G G +K ++ A+K ++ +REV++ + ++V+
Sbjct: 30 QVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIVR 81
Query: 162 FYNAFED----DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+ +E+ + I ME +GGEL RI R D +TE++A+
Sbjct: 82 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQD---------------RGDQAFTEREAS 126
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+++ + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 127 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 186
Query: 278 GSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVL 328
+ YYVAPEVL GPE D+WS+GVI YILLCG PF+ G+ +
Sbjct: 187 YTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 242
Query: 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 387
+ +F W +S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 243 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 301
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 140/280 (50%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 71
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E G + + ++K S++ E+ A
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTV-----------------YRELQKLSKFDEQRTA 114
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK DFG S P + D+
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRDDLC 170
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 230
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 231 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 147/298 (49%), Gaps = 38/298 (12%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV 140
P G + + + DFD IG+ LG G+FG Y+A ++ + +A+K + K ++
Sbjct: 2 PLGSKRQWTLE-DFD----IGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE 56
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSA 200
++REV+I Q+ H N+++ Y F D VY+ +E G +
Sbjct: 57 HQLRREVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV---------------- 99
Query: 201 WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
+ ++K SR+ E+ A + ++ + CH ++HRD+KPEN L S E LK D
Sbjct: 100 -YRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGE---LKIAD 155
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKT 319
FG S P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G PF T
Sbjct: 156 FGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHT 214
Query: 320 EDGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
++ + R + PDF ++ A+D + +LL + RLT A+ L HPW++
Sbjct: 215 YQETYRRISRVEFTFPDF-------VTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 130/269 (48%), Gaps = 29/269 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 89
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VK Y F+DD +Y + + GELL I RK + E
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----------------RKIGSFDETCTR 132
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQ 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K
Sbjct: 133 FYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARAN 189
Query: 275 DIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + D
Sbjct: 190 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 249
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL 362
F K +P A+D V+KLLV D RL
Sbjct: 250 FPEKFFP----KARDLVEKLLVLDATKRL 274
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 147/298 (49%), Gaps = 38/298 (12%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV 140
P G + + + DFD IG+ LG G+FG Y+A ++ + +A+K + K ++
Sbjct: 2 PLGSKRQWTLE-DFD----IGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE 56
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSA 200
++REV+I Q+ H N+++ Y F D VY+ +E G +
Sbjct: 57 HQLRREVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV---------------- 99
Query: 201 WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
+ ++K SR+ E+ A + ++ + CH ++HRD+KPEN L S E LK D
Sbjct: 100 -YRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGE---LKIAD 155
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKT 319
FG S P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G PF T
Sbjct: 156 FGWS-VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHT 214
Query: 320 EDGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
++ + R + PDF ++ A+D + +LL + RLT A+ L HPW++
Sbjct: 215 YQETYRRISRVEFTFPDF-------VTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 137/299 (45%), Gaps = 40/299 (13%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G G +K ++ A+K ++ +REV++ + ++V+
Sbjct: 38 QVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIVR 89
Query: 162 FYNAFED----DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+ +E+ + I ME +GGEL RI R D +TE++A+
Sbjct: 90 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQD---------------RGDQAFTEREAS 134
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+++ + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 135 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 194
Query: 278 GSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVL 328
+ YYVAPEVL GPE D+WS+GVI YILLCG PF+ G+ +
Sbjct: 195 YTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 250
Query: 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 387
+ +F W +S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 251 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 309
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 130/269 (48%), Gaps = 29/269 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 93
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VK Y F+DD +Y + + GELL I RK + E
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----------------RKIGSFDETCTR 136
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQ 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K
Sbjct: 137 FYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARAN 193
Query: 275 DIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + D
Sbjct: 194 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 253
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL 362
F K +P A+D V+KLLV D RL
Sbjct: 254 FPEKFFP----KARDLVEKLLVLDATKRL 278
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 154/317 (48%), Gaps = 49/317 (15%)
Query: 61 QQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN 120
++L +KQ + + +RQ + +DF+ IG+ LG G+FG Y+A +K +
Sbjct: 6 EELASKQKNEESKKRQWAL------------EDFE----IGRPLGKGKFGNVYLAREKQS 49
Query: 121 GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180
+A+K + K ++ ++REV+I Q+ H N+++ Y F D VY+ +E
Sbjct: 50 KFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAP 108
Query: 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 240
G + + ++K S++ E+ A + ++ + CH ++HRD+
Sbjct: 109 LGTV-----------------YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 151
Query: 241 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVW 299
KPEN L SA E LK DFG S P + + G+ Y+ PE+++ R + D+W
Sbjct: 152 KPENLLLGSAGE---LKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 207
Query: 300 SIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVK 356
S+GV+ Y L G+ PF T +K + R + PDF ++ A+D + +LL
Sbjct: 208 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARDLISRLLKH 260
Query: 357 DPRARLTAAQALSHPWV 373
+P R + L HPW+
Sbjct: 261 NPSQRPMLREVLEHPWI 277
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 129/269 (47%), Gaps = 29/269 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 92
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VK Y F+DD +Y + + GELL I RK + E
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----------------RKIGSFDETCTR 135
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQ 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K
Sbjct: 136 FYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARAN 192
Query: 275 DIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF ++++ + D
Sbjct: 193 XFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYD 252
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL 362
F K +P A+D V+KLLV D RL
Sbjct: 253 FPEKFFP----KARDLVEKLLVLDATKRL 277
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 130/269 (48%), Gaps = 29/269 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 90
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VK Y F+DD +Y + + GELL I RK + E
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----------------RKIGSFDETCTR 133
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQ 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K
Sbjct: 134 FYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARAN 190
Query: 275 DIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + D
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 250
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL 362
F K +P A+D V+KLLV D RL
Sbjct: 251 FPEKFFP----KARDLVEKLLVLDATKRL 275
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 130/269 (48%), Gaps = 29/269 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 90
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VK Y F+DD +Y + + GELL I RK + E
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----------------RKIGSFDETCTR 133
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQ 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K
Sbjct: 134 FYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARAN 190
Query: 275 DIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + D
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 250
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL 362
F K +P A+D V+KLLV D RL
Sbjct: 251 FPEKFFP----KARDLVEKLLVLDATKRL 275
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 130/269 (48%), Gaps = 29/269 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 74
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VK Y F+DD +Y + + GELL I RK + E
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----------------RKIGSFDETCTR 117
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQ 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K
Sbjct: 118 FYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARAN 174
Query: 275 DIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + D
Sbjct: 175 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 234
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL 362
F K +P A+D V+KLLV D RL
Sbjct: 235 FPEKFFP----KARDLVEKLLVLDATKRL 259
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 130/269 (48%), Gaps = 29/269 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 89
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VK Y F+DD +Y + + GELL I RK + E
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----------------RKIGSFDETCTR 132
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQ 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K
Sbjct: 133 FYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARAN 189
Query: 275 DIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + D
Sbjct: 190 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 249
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL 362
F K +P A+D V+KLLV D RL
Sbjct: 250 FPEKFFP----KARDLVEKLLVLDATKRL 274
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 130/269 (48%), Gaps = 29/269 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 92
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VK Y F+DD +Y + + GELL I RK + E
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----------------RKIGSFDETCTR 135
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQ 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K
Sbjct: 136 FYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARAN 192
Query: 275 DIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + D
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 252
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL 362
F K +P A+D V+KLLV D RL
Sbjct: 253 FPEKFFP----KARDLVEKLLVLDATKRL 277
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 130/269 (48%), Gaps = 29/269 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 92
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VK Y F+DD +Y + + GELL I RK + E
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----------------RKIGSFDETCTR 135
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQ 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K
Sbjct: 136 FYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARAN 192
Query: 275 DIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + D
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 252
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL 362
F K +P A+D V+KLLV D RL
Sbjct: 253 FPEKFFP----KARDLVEKLLVLDATKRL 277
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 154/317 (48%), Gaps = 49/317 (15%)
Query: 61 QQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN 120
++L +KQ + + +RQ + +DF+ IG+ LG G+FG Y+A +K +
Sbjct: 15 EELASKQKNEESKKRQWAL------------EDFE----IGRPLGKGKFGNVYLAREKQS 58
Query: 121 GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180
+A+K + K ++ ++REV+I Q+ H N+++ Y F D VY+ +E
Sbjct: 59 KFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAP 117
Query: 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 240
G + + ++K S++ E+ A + ++ + CH ++HRD+
Sbjct: 118 LGTV-----------------YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 160
Query: 241 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVW 299
KPEN L SA E LK DFG S P + + G+ Y+ PE+++ R + D+W
Sbjct: 161 KPENLLLGSAGE---LKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 216
Query: 300 SIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVK 356
S+GV+ Y L G+ PF T +K + R + PDF ++ A+D + +LL
Sbjct: 217 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARDLISRLLKH 269
Query: 357 DPRARLTAAQALSHPWV 373
+P R + L HPW+
Sbjct: 270 NPSQRPMLREVLEHPWI 286
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 130/269 (48%), Gaps = 29/269 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 90
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VK Y F+DD +Y + + GELL I RK + E
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----------------RKIGSFDETCTR 133
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQ 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K
Sbjct: 134 FYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARAN 190
Query: 275 DIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + D
Sbjct: 191 AFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 250
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL 362
F K +P A+D V+KLLV D RL
Sbjct: 251 FPEKFFP----KARDLVEKLLVLDATKRL 275
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 130/269 (48%), Gaps = 29/269 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 97
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VK Y F+DD +Y + + GELL I RK + E
Sbjct: 98 FFVKLYFCFQDDEKLYFGLSYAKNGELLKYI-----------------RKIGSFDETCTR 140
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQ 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K
Sbjct: 141 FYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARAN 197
Query: 275 DIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + D
Sbjct: 198 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 257
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL 362
F K +P A+D V+KLLV D RL
Sbjct: 258 FPEKFFP----KARDLVEKLLVLDATKRL 282
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 129/269 (47%), Gaps = 29/269 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 92
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VK Y F+DD +Y + + GELL I RK + E
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----------------RKIGSFDETCTR 135
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQ 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K
Sbjct: 136 FYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARAN 192
Query: 275 DIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF ++++ + D
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYD 252
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL 362
F K +P A+D V+KLLV D RL
Sbjct: 253 FPEKFFP----KARDLVEKLLVLDATKRL 277
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 130/269 (48%), Gaps = 29/269 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 93
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VK Y F+DD +Y + + GELL I RK + E
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----------------RKIGSFDETCTR 136
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQ 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K
Sbjct: 137 FYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARAN 193
Query: 275 DIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + D
Sbjct: 194 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 253
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL 362
F K +P A+D V+KLLV D RL
Sbjct: 254 FPEKFFP----KARDLVEKLLVLDATKRL 278
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 130/269 (48%), Gaps = 29/269 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 92
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VK Y F+DD +Y + + GELL I RK + E
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----------------RKIGSFDETCTR 135
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQ 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K
Sbjct: 136 FYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARAN 192
Query: 275 DIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + D
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 252
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL 362
F K +P A+D V+KLLV D RL
Sbjct: 253 FPEKFFP----KARDLVEKLLVLDATKRL 277
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 39/280 (13%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEIXINKML 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
HENVVKFY + N Y+ +E C GGEL DR I D E
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-----------------IEPDIGMPE 103
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK- 272
DA Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE 160
Query: 273 --FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC----- 214
Query: 329 RNKPDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 363
+ D++ K PW I ++ + K+LV++P AR+T
Sbjct: 215 QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 130/269 (48%), Gaps = 29/269 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 68
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VK Y F+DD +Y + + GELL IRK + E
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLK-----------------YIRKIGSFDETCTR 111
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQ 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K
Sbjct: 112 FYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARAN 168
Query: 275 DIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + D
Sbjct: 169 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 228
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL 362
F K +P A+D V+KLLV D RL
Sbjct: 229 FPEKFFP----KARDLVEKLLVLDATKRL 253
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 140/280 (50%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 68
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E G + + ++K S++ E+ A
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTV-----------------YRELQKLSKFDEQRTA 111
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK DFG S P + ++
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTELC 167
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 227
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 228 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 130/269 (48%), Gaps = 29/269 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 70
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VK Y F+DD +Y + + GELL IRK + E
Sbjct: 71 FFVKLYFTFQDDEKLYFGLSYAKNGELLK-----------------YIRKIGSFDETCTR 113
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQ 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K
Sbjct: 114 FYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARAN 170
Query: 275 DIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + D
Sbjct: 171 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 230
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL 362
F K +P A+D V+KLLV D RL
Sbjct: 231 FPEKFFP----KARDLVEKLLVLDATKRL 255
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 130/269 (48%), Gaps = 29/269 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 67
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VK Y F+DD +Y + + GELL IRK + E
Sbjct: 68 FFVKLYFTFQDDEKLYFGLSYAKNGELLK-----------------YIRKIGSFDETCTR 110
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQ 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K
Sbjct: 111 FYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARAN 167
Query: 275 DIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + D
Sbjct: 168 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 227
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL 362
F K +P A+D V+KLLV D RL
Sbjct: 228 FPEKFFP----KARDLVEKLLVLDATKRL 252
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 39/280 (13%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
HENVVKFY + N Y+ +E C GGEL DR I D E
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-----------------IEPDIGMPE 103
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK- 272
DA Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE 160
Query: 273 --FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC----- 214
Query: 329 RNKPDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 363
+ D++ K PW I ++ + K+LV++P AR+T
Sbjct: 215 QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 130/269 (48%), Gaps = 29/269 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 69
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VK Y F+DD +Y + + GELL IRK + E
Sbjct: 70 FFVKLYFTFQDDEKLYFGLSYAKNGELLK-----------------YIRKIGSFDETCTR 112
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQ 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K
Sbjct: 113 FYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARAN 169
Query: 275 DIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + D
Sbjct: 170 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 229
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL 362
F K +P A+D V+KLLV D RL
Sbjct: 230 FPEKFFP----KARDLVEKLLVLDATKRL 254
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 39/280 (13%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 62
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
HENVVKFY + N Y+ +E C GGEL DR I D E
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-----------------IEPDIGMPE 104
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK- 272
DA Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE 161
Query: 273 --FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC----- 215
Query: 329 RNKPDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 363
+ D++ K PW I ++ + K+LV++P AR+T
Sbjct: 216 QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 39/280 (13%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEIXINKML 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
HENVVKFY + N Y+ +E C GGEL DR I D E
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-----------------IEPDIGMPE 103
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK- 272
DA Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE 160
Query: 273 --FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC----- 214
Query: 329 RNKPDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 363
+ D++ K PW I ++ + K+LV++P AR+T
Sbjct: 215 QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 39/280 (13%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEIXINKML 62
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
HENVVKFY + N Y+ +E C GGEL DR I D E
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-----------------IEPDIGMPE 104
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK- 272
DA Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE 161
Query: 273 --FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D
Sbjct: 162 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC----- 215
Query: 329 RNKPDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 363
+ D++ K PW I ++ + K+LV++P AR+T
Sbjct: 216 QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 139/280 (49%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 71
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E G + + ++K S++ E+ A
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTV-----------------YRELQKLSKFDEQRTA 114
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK DFG S P + +
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTTLC 170
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 230
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 231 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 139/280 (49%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E G + + ++K S++ E+ A
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTV-----------------YRELQKLSKFDEQRTA 116
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK DFG S P + +
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTTLC 172
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 232
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 233 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 39/280 (13%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
HENVVKFY + N Y+ +E C GGEL DR I D E
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-----------------IEPDIGMPE 103
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK- 272
DA Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE 160
Query: 273 --FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC----- 214
Query: 329 RNKPDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 363
+ D++ K PW I ++ + K+LV++P AR+T
Sbjct: 215 QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 39/280 (13%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 60
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
HENVVKFY + N Y+ +E C GGEL DR I D E
Sbjct: 61 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-----------------IEPDIGMPE 102
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK- 272
DA Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 103 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE 159
Query: 273 --FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D
Sbjct: 160 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC----- 213
Query: 329 RNKPDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 363
+ D++ K PW I ++ + K+LV++P AR+T
Sbjct: 214 QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 253
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 39/280 (13%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 62
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
HENVVKFY + N Y+ +E C GGEL DR I D E
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-----------------IEPDIGMPE 104
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK- 272
DA Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE 161
Query: 273 --FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC----- 215
Query: 329 RNKPDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 363
+ D++ K PW I ++ + K+LV++P AR+T
Sbjct: 216 QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 39/280 (13%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 62
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
HENVVKFY + N Y+ +E C GGEL DR I D E
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-----------------IEPDIGMPE 104
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK- 272
DA Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE 161
Query: 273 --FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC----- 215
Query: 329 RNKPDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 363
+ D++ K PW I ++ + K+LV++P AR+T
Sbjct: 216 QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 39/280 (13%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
HENVVKFY + N Y+ +E C GGEL DR I D E
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-----------------IEPDIGMPE 103
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK- 272
DA Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE 160
Query: 273 --FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC----- 214
Query: 329 RNKPDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 363
+ D++ K PW I ++ + K+LV++P AR+T
Sbjct: 215 QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 39/280 (13%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
HENVVKFY + N Y+ +E C GGEL DR I D E
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-----------------IEPDIGMPE 103
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK- 272
DA Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE 160
Query: 273 --FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC----- 214
Query: 329 RNKPDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 363
+ D++ K PW I ++ + K+LV++P AR+T
Sbjct: 215 QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 39/280 (13%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
HENVVKFY + N Y+ +E C GGEL DR I D E
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-----------------IEPDIGMPE 103
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK- 272
DA Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE 160
Query: 273 --FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC----- 214
Query: 329 RNKPDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 363
+ D++ K PW I ++ + K+LV++P AR+T
Sbjct: 215 QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 39/280 (13%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 62
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
HENVVKFY + N Y+ +E C GGEL DR I D E
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-----------------IEPDIGMPE 104
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK- 272
DA Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE 161
Query: 273 --FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC----- 215
Query: 329 RNKPDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 363
+ D++ K PW I ++ + K+LV++P AR+T
Sbjct: 216 QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 139/280 (49%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 70
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E G + + ++K S++ E+ A
Sbjct: 71 NILRLYGYFHDATRVYLILEYAPLGTV-----------------YRELQKLSKFDEQRTA 113
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK DFG S P + +
Sbjct: 114 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRXXLC 169
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 229
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 230 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 39/280 (13%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 62
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
HENVVKFY + N Y+ +E C GGEL DR I D E
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-----------------IEPDIGMPE 104
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK- 272
DA Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE 161
Query: 273 --FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC----- 215
Query: 329 RNKPDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 363
+ D++ K PW I ++ + K+LV++P AR+T
Sbjct: 216 QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 39/280 (13%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
HENVVKFY + N Y+ +E C GGEL DR I D E
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-----------------IEPDIGMPE 103
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK- 272
DA Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE 160
Query: 273 --FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC----- 214
Query: 329 RNKPDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 363
+ D++ K PW I ++ + K+LV++P AR+T
Sbjct: 215 QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 39/280 (13%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 62
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
HENVVKFY + N Y+ +E C GGEL DR I D E
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-----------------IEPDIGMPE 104
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK- 272
DA Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE 161
Query: 273 --FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC----- 215
Query: 329 RNKPDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 363
+ D++ K PW I ++ + K+LV++P AR+T
Sbjct: 216 QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 139/280 (49%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 68
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E G + + ++K S++ E+ A
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTV-----------------YRELQKLSKFDEQRTA 111
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK DFG S P + +
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTTLC 167
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 227
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 228 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 139/280 (49%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 69
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E G + + ++K S++ E+ A
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTV-----------------YRELQKLSKFDEQRTA 112
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK DFG S P + +
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSCH-APSSRRTTLS 168
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 228
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 229 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 139/280 (49%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 69
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E G + + ++K S++ E+ A
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTV-----------------YRELQKLSKFDEQRTA 112
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK DFG S P + +
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRDTLC 168
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 228
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 229 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 139/280 (49%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 67
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E G + + ++K S++ E+ A
Sbjct: 68 NILRLYGYFHDATRVYLILEYAPLGTV-----------------YRELQKLSKFDEQRTA 110
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK DFG S P + +
Sbjct: 111 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVH-APSSRRTTLC 166
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 167 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 226
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 227 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 259
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 39/280 (13%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
HENVVKFY + N Y+ +E C GGEL DR I D E
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-----------------IEPDIGMPE 103
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK- 272
DA Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE 160
Query: 273 --FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC----- 214
Query: 329 RNKPDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 363
+ D++ K PW I ++ + K+LV++P AR+T
Sbjct: 215 QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 139/280 (49%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 68
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E G + + ++K S++ E+ A
Sbjct: 69 NILRLYGYFHDSTRVYLILEYAPLGTV-----------------YRELQKLSKFDEQRTA 111
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK DFG S P + +
Sbjct: 112 TYITELANALSYCHSKKVIHRDIKPENLLLGSAGE---LKIADFGWSVH-APSSRRAALC 167
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPD 227
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 228 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 39/280 (13%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
HENVVKFY + N Y+ +E C GGEL DR I D E
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-----------------IEPDIGMPE 103
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK- 272
DA Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE 160
Query: 273 --FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC----- 214
Query: 329 RNKPDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 363
+ D++ K PW I ++ + K+LV++P AR+T
Sbjct: 215 QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 139/280 (49%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 71
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E G + + ++K S++ E+ A
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTV-----------------YRELQKLSKFDEQRTA 114
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK DFG S P + +
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVH-APSSRRTTLC 170
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 230
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 231 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 138/280 (49%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E G + + ++K S++ E+ A
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTV-----------------YRELQKLSKFDEQRTA 116
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK DFG S P + +
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTTLC 172
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE ++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 173 GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 232
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 233 F-------VTEGARDLISRLLKHNPSQRPXLREVLEHPWI 265
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 139/280 (49%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 71
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E G + + ++K S++ E+ A
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTV-----------------YRELQKLSKFDEQRTA 114
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK DFG S P + +
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVH-APSSRRXXLC 170
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 230
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 231 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 139/280 (49%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 72
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E G + + ++K S++ E+ A
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTV-----------------YRELQKLSKFDEQRTA 115
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK DFG S P + +
Sbjct: 116 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVH-APSSRRTTLC 171
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 231
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 232 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 264
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 39/280 (13%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
HENVVKFY + N Y+ +E C GGEL DR I D E
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-----------------IEPDIGMPE 103
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK- 272
DA Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE 160
Query: 273 --FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDS-----X 214
Query: 329 RNKPDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 363
+ D++ K PW I ++ + K+LV++P AR+T
Sbjct: 215 QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 139/280 (49%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 71
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E G + + ++K S++ E+ A
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTV-----------------YRELQKLSKFDEQRTA 114
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK DFG S P + +
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVH-APSSRRAALC 170
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 230
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 231 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 139/280 (49%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 68
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E G + + ++K S++ E+ A
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTV-----------------YRELQKLSKFDEQRTA 111
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK DFG S P + +
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVH-APSSRRTXLC 167
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 227
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 228 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 139/280 (49%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 68
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E G + + ++K S++ E+ A
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTV-----------------YRELQKLSKFDEQRTA 111
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK DFG S P + +
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVH-APSSRRXXLC 167
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 227
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 228 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 133/280 (47%), Gaps = 27/280 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY + K +G G FG + DK + + VAVK IE+ + I E+VKRE+ ++L H
Sbjct: 19 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI----DENVKREIINHRSLR-H 73
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
N+V+F ++ I ME GGEL +RI R++E +A
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGELFERIC-----------------NAGRFSEDEA 116
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+Q++ + CH + HRD+K EN L + LK DFG S + +
Sbjct: 117 RFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPA-PRLKICDFGYSKSSVLHSQPKST 175
Query: 277 VGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KP 332
VG+ Y+APEVL +K G +DVWS GV Y++L G PF D E F++ +
Sbjct: 176 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV 235
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
+ + IS + + ++ V DP R++ + +H W
Sbjct: 236 QYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEW 275
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 129/269 (47%), Gaps = 29/269 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 92
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VK Y F+DD +Y + + G LL I RK + E
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYI-----------------RKIGSFDETCTR 135
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQ 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K
Sbjct: 136 FYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARAN 192
Query: 275 DIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E IF+++++ + D
Sbjct: 193 SFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 252
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL 362
F K +P A+D V+KLLV D RL
Sbjct: 253 FPEKFFP----KARDLVEKLLVLDATKRL 277
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 139/280 (49%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 68
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E G + + ++K S++ E+ A
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTV-----------------YRELQKLSKFDEQRTA 111
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK DFG S P + +
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVH-APSSRRAALC 167
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 227
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 228 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 139/280 (49%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 70
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E G + + ++K S++ E+ A
Sbjct: 71 NILRLYGYFHDATRVYLILEYAPLGTV-----------------YRELQKLSKFDEQRTA 113
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK +FG S P + +
Sbjct: 114 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIANFGWS-VHAPSSRRTTLC 169
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 229
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 230 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 138/280 (49%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K +A+K + K ++ ++REV+I Q+ H
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 65
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E G + + ++K S++ E+ A
Sbjct: 66 NILRLYGYFHDATRVYLILEYAPLGTV-----------------YRELQKLSKFDEQRTA 108
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK DFG S P + +
Sbjct: 109 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVH-APSSRRTTLC 164
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 165 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 224
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 225 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 257
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 129/269 (47%), Gaps = 29/269 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 95
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VK Y F+DD +Y + + GELL IRK + E
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGELLKY-----------------IRKIGSFDETCTR 138
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQ 274
+++ H G++HRD+KPEN L ED ++ TDFG + + P K
Sbjct: 139 FYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARAN 195
Query: 275 DIVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
VG+A YV+PE+L KS + SD+W++G I Y L+ G PF E IF+++++ + D
Sbjct: 196 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 255
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL 362
F +P A+D V+KLLV D RL
Sbjct: 256 FPAAFFP----KARDLVEKLLVLDATKRL 280
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 138/283 (48%), Gaps = 31/283 (10%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
DFD IG+ LG G+FG Y+A +K N +A+K + K+++ ++RE++I Q+
Sbjct: 16 DFD----IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI-QS 70
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
H N+++ YN F D +Y+ +E GEL + ++K R+
Sbjct: 71 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL-----------------YKELQKHGRFD 113
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 272
E+ +A + ++ CH ++HRD+KPEN L E LK DFG S P +
Sbjct: 114 EQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWS-VHAPSLR 169
Query: 273 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331
+ + G+ Y+ PE+++ K+ E D+W GV+ Y L G PF + + ++
Sbjct: 170 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVD 229
Query: 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
F P +S+ +KD + KLL P RL + HPWV+
Sbjct: 230 LKFP----PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 268
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 138/278 (49%), Gaps = 27/278 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + VA+K + K+++ ++RE++I QA H
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEI-QAHLHHP 83
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ YN F D +Y+ +E GEL + ++K + E+ A
Sbjct: 84 NILRLYNYFYDRRRIYLILEYAPRGEL-----------------YKELQKSCTFDEQRTA 126
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
++ ++ CH ++HRD+KPEN LK DFG S P + + +
Sbjct: 127 TIMEELADALMYCHGKKVIHRDIKPEN---LLLGLKGELKIADFGWSVH-APSLRRKTMC 182
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336
G+ Y+ PE+++ R + D+W IGV+ Y LL G PF + + ++ +++ F
Sbjct: 183 GTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPA 242
Query: 337 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
S+ A+D + KLL +P RL AQ +HPWVR
Sbjct: 243 ----SVPTGAQDLISKLLRHNPSERLPLAQVSAHPWVR 276
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 134/280 (47%), Gaps = 39/280 (13%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 4 FVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
HENVVKFY + N Y+ +E C GGEL DR I D E
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-----------------IEPDIGMPE 103
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK- 272
DA Q++ H G+ HRD+KPEN L E +LK +DFGL+ + +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE 160
Query: 273 --FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P WD+ D
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC----- 214
Query: 329 RNKPDFRRK-----PWPSISNSAKDFVKKLLVKDPRARLT 363
+ D++ K PW I ++ + K+LV++P AR+T
Sbjct: 215 QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 133/280 (47%), Gaps = 27/280 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY + K +G G FG + DK + + VAVK IE+ + I E+VKRE+ ++L H
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI----DENVKREIINHRSLR-H 74
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
N+V+F ++ I ME GGEL +RI R++E +A
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERIC-----------------NAGRFSEDEA 117
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+Q++ + CH + HRD+K EN L + LK FG S + +D
Sbjct: 118 RFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPA-PRLKICAFGYSKSSVLHSQPKDT 176
Query: 277 VGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KP 332
VG+ Y+APEVL +K G +DVWS GV Y++L G PF D E F++ +
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV 236
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
+ + IS + + ++ V DP R++ + +H W
Sbjct: 237 QYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEW 276
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 139/280 (49%), Gaps = 33/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 71
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+++ Y F D VY+ +E G + + ++K S++ E+ A
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTV-----------------YRELQKLSKFDEQRTA 114
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++ + CH ++HRD+KPEN L SA E LK +FG S P + +
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIANFGWSVH-APSSRRTTLC 170
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PD 333
G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T +K + R + PD
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 230
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
F ++ A+D + +LL +P R + L HPW+
Sbjct: 231 F-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 138/283 (48%), Gaps = 31/283 (10%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
DFD IG+ LG G+FG Y+A +K N +A+K + K+++ ++RE++I Q+
Sbjct: 15 DFD----IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI-QS 69
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
H N+++ YN F D +Y+ +E GEL + ++K R+
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL-----------------YKELQKHGRFD 112
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 272
E+ +A + ++ CH ++HRD+KPEN L E LK DFG S P +
Sbjct: 113 EQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWS-VHAPSLR 168
Query: 273 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331
+ + G+ Y+ PE+++ K+ E D+W GV+ Y L G PF + + ++
Sbjct: 169 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVD 228
Query: 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
F P +S+ +KD + KLL P RL + HPWV+
Sbjct: 229 LKFP----PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 132/280 (47%), Gaps = 27/280 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY + K +G G FG + DK + + VAVK IE+ + I +VKRE+ ++L H
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI----AANVKREIINHRSLR-H 74
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
N+V+F ++ I ME GGEL +RI R++E +A
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERIC-----------------NAGRFSEDEA 117
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+Q++ + CH + HRD+K EN L + LK DFG S + +
Sbjct: 118 RFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPA-PRLKICDFGYSKSSVLHSQPKST 176
Query: 277 VGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KP 332
VG+ Y+APEVL +K G +DVWS GV Y++L G PF D E F++ +
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV 236
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
+ + IS + + ++ V DP R++ + +H W
Sbjct: 237 QYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEW 276
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 150/341 (43%), Gaps = 43/341 (12%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
++LG G G +K ++ A+K ++ +REV++ + ++V
Sbjct: 67 SQVLGLGINGKVLQIFNKRTQEKFALKXLQD--------CPKARREVELHWRASQCPHIV 118
Query: 161 KFYNAFED----DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ + +E+ + I E +GGEL RI R D +TE++A
Sbjct: 119 RIVDVYENLYAGRKCLLIVXECLDGGELFSRIQD---------------RGDQAFTEREA 163
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+ + + + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 164 SEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 223
Query: 277 VGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEV 327
+ YYVAPEVL GPE D WS+GVI YILLCG PF+ G +
Sbjct: 224 CYTPYYVAPEVL----GPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRI 279
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 387
+ +F W +S K ++ LL +P R T + +HPW+ + + P+ S
Sbjct: 280 RXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTPLHTS 339
Query: 388 -VLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDA 427
VL ++ ++ +K+ ALA+ D E ++ DA
Sbjct: 340 RVLKEDKE--RWEDVKEEXTSALATMRVDYEQIKIKKIEDA 378
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 132/280 (47%), Gaps = 27/280 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY + K +G G FG + DK + + VAVK IE+ + I E+VKRE+ ++L H
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI----DENVKREIINHRSLR-H 74
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
N+V+F ++ I ME GGEL +RI R++E +A
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERIC-----------------NAGRFSEDEA 117
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+Q++ + CH + HRD+K EN L + LK FG S + +
Sbjct: 118 RFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPA-PRLKICAFGYSKSSVLHSQPKST 176
Query: 277 VGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KP 332
VG+ Y+APEVL +K G +DVWS GV Y++L G PF D E F++ +
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV 236
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
+ + IS + + ++ V DP R++ + +H W
Sbjct: 237 QYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEW 276
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 163/338 (48%), Gaps = 44/338 (13%)
Query: 60 YQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKA 119
+Q + H++ + Q V P R Y +F + +G G G +AT+K
Sbjct: 19 FQSMSRVSHEQFRAALQLVVSPGDPRE---YLANFIK-------IGEGSTGIVCIATEKH 68
Query: 120 NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELC 179
G +VAVKK++ K E + EV I++ H+NVV Y+++ + +++ ME
Sbjct: 69 TGKQVAVKKMDLRKQQ---RRELLFNEVVIMRDYH-HDNVVDMYSSYLVGDELWVVMEFL 124
Query: 180 EGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 239
EGG L D I +R E+ A V +LR + H G++HRD
Sbjct: 125 EGGALTD------------------IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRD 166
Query: 240 MKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVLKR-KSGPESD 297
+K ++ L S D +K +DFG + K K + +VG+ Y++APEV+ R G E D
Sbjct: 167 IKSDSILLTS---DGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVD 223
Query: 298 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 357
+WS+G++ ++ G P++++ + + + P R K +S+ + F+ +LV++
Sbjct: 224 IWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPP-RVKDLHKVSSVLRGFLDLMLVRE 282
Query: 358 PRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQF 395
P R TA + L HP+++ G S ++ MRQ+
Sbjct: 283 PSQRATAQELLGHPFLKLAGPPS------CIVPLMRQY 314
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 31/283 (10%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
DFD I + LG G+FG Y+A +K N +A+K + K+++ ++RE++I Q+
Sbjct: 15 DFD----IVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI-QS 69
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
H N+++ YN F D +Y+ +E GEL + ++K R+
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL-----------------YKELQKHGRFD 112
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 272
E+ +A + ++ CH ++HRD+KPEN L E LK DFG S P +
Sbjct: 113 EQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWS-VHAPSLR 168
Query: 273 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331
+ + G+ Y+ PE+++ K+ E D+W GV+ Y L G PF + + ++
Sbjct: 169 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVD 228
Query: 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
F P +S+ +KD + KLL P RL + HPWV+
Sbjct: 229 LKFP----PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 132/285 (46%), Gaps = 37/285 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY K +G G FG + DK + VAVK IE+ I E+V+RE+ ++L H
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI----DENVQREIINHRSLR-H 75
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
N+V+F ++ I ME GGEL +RI R++E +A
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELYERIC-----------------NAGRFSEDEA 118
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+Q+L + CH + HRD+K EN L + LK DFG S + +
Sbjct: 119 RFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPA-PRLKICDFGYSKSSVLHSQPKST 177
Query: 277 VGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR----- 329
VG+ Y+APEVL R+ G +DVWS GV Y++L G PF D E +++ ++
Sbjct: 178 VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSV 237
Query: 330 --NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
+ PD R IS + ++ V DP R++ + +H W
Sbjct: 238 KYSIPDDIR-----ISPECCHLISRIFVADPATRISIPEIKTHSW 277
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 131/280 (46%), Gaps = 27/280 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY + K +G G FG + DK + VAVK IE+ + I E+VKRE+ ++L H
Sbjct: 20 RYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKI----DENVKREIINHRSLR-H 74
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
N+V+F ++ I ME GGEL +RI R++E +A
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERIC-----------------NAGRFSEDEA 117
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+Q++ + H + HRD+K EN L + LK DFG S + +
Sbjct: 118 RFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPA-PRLKIADFGYSKASVLHSQPKSA 176
Query: 277 VGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KP 332
VG+ Y+APEVL +K G +DVWS GV Y++L G PF D E F++ +
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV 236
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
+ + IS + + ++ V DP R++ + +H W
Sbjct: 237 QYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEW 276
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 143/290 (49%), Gaps = 27/290 (9%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+RY G+ LG G F Y TD + A K + K+ ++ P E + E+ I ++L
Sbjct: 26 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL-D 84
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
+ +VV F+ FEDD++VY+ +E+C LL+ L R+ + TE +
Sbjct: 85 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLE----------------LHKRRKA-VTEPE 127
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQ 274
A +RQ ++ H + ++HRD+K N +D +K DFGL+ I+ G++ +
Sbjct: 128 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDGERKK 184
Query: 275 DIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
D+ G+ Y+APEVL +K E D+WS+G I Y LL G+ PF + + +N+
Sbjct: 185 DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS 244
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 383
R I+ A ++++L DP R + A+ L+ + G +P
Sbjct: 245 VPR----HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 290
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 143/290 (49%), Gaps = 27/290 (9%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+RY G+ LG G F Y TD + A K + K+ ++ P E + E+ I ++L
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL-D 100
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
+ +VV F+ FEDD++VY+ +E+C LL+ L R+ + TE +
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLE----------------LHKRRKA-VTEPE 143
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQ 274
A +RQ ++ H + ++HRD+K N +D +K DFGL+ I+ G++ +
Sbjct: 144 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDGERKK 200
Query: 275 DIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
D+ G+ Y+APEVL +K E D+WS+G I Y LL G+ PF + + +N+
Sbjct: 201 DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS 260
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 383
R I+ A ++++L DP R + A+ L+ + G +P
Sbjct: 261 VPR----HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 306
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 104/173 (60%), Gaps = 11/173 (6%)
Query: 393 RQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK 452
+QF ++ K+ ALR +A +L +EE+A L++ F+ ID DK+G I+ EE++ L K +
Sbjct: 1 KQFSAXNKFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGL-KRVGAN 59
Query: 453 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 512
LKES +L++ QA D + G +D+ EF+AATLH++++E D HL AAF FD D
Sbjct: 60 LKESEILDLXQAADVDNSGTIDYKEFIAATLHLNKIERED----HLF--AAFTYFDKDGS 113
Query: 513 GFITPEELRMHTGLKGSIDPLLEE----ADIDKDGRISLSEFRRLLRTASISS 561
G+ITP+EL+ G D +EE D D DGRI +EF + SI+
Sbjct: 114 GYITPDELQQACEEFGVEDVRIEELXRDVDQDNDGRIDYNEFVAXXQKGSITG 166
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 143/285 (50%), Gaps = 29/285 (10%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G F + +D + A K + K+ ++ P E + E+ I ++LA H++VV F
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGF 82
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
+ FED+++V++ +ELC LL+ L R+ + TE +A +RQ
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLE----------------LHKRRKA-LTEPEARYYLRQ 125
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAY 281
++ H + ++HRD+K N ED +K DFGL+ ++ G++ + + G+
Sbjct: 126 IVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPN 182
Query: 282 YVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-LRNKPDFRRKPW 339
Y+APEVL +K E DVWSIG I Y LL G+ PF E KE LR K + P
Sbjct: 183 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----ETSCLKETYLRIKKNEYSIPK 238
Query: 340 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 384
I+ A ++K+L DP AR T + L+ + G + +PI
Sbjct: 239 -HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPI 282
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 143/285 (50%), Gaps = 29/285 (10%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G F + +D + A K + K+ ++ P E + E+ I ++LA H++VV F
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGF 82
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
+ FED+++V++ +ELC LL+ L R+ + TE +A +RQ
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLE----------------LHKRRKA-LTEPEARYYLRQ 125
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAY 281
++ H + ++HRD+K N ED +K DFGL+ ++ G++ + + G+
Sbjct: 126 IVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPN 182
Query: 282 YVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-LRNKPDFRRKPW 339
Y+APEVL +K E DVWSIG I Y LL G+ PF E KE LR K + P
Sbjct: 183 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----ETSCLKETYLRIKKNEYSIPK 238
Query: 340 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 384
I+ A ++K+L DP AR T + L+ + G + +PI
Sbjct: 239 -HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPI 282
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 143/285 (50%), Gaps = 29/285 (10%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G F + +D + A K + K+ ++ P E + E+ I ++LA H++VV F
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGF 86
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
+ FED+++V++ +ELC LL+ L R+ + TE +A +RQ
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSLLE----------------LHKRRKA-LTEPEARYYLRQ 129
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAY 281
++ H + ++HRD+K N ED +K DFGL+ ++ G++ + + G+
Sbjct: 130 IVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPN 186
Query: 282 YVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-LRNKPDFRRKPW 339
Y+APEVL +K E DVWSIG I Y LL G+ PF E KE LR K + P
Sbjct: 187 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----ETSCLKETYLRIKKNEYSIPK 242
Query: 340 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 384
I+ A ++K+L DP AR T + L+ + G + +PI
Sbjct: 243 -HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPI 286
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 142/290 (48%), Gaps = 27/290 (9%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+RY G+ LG G F Y TD + A K + K+ ++ P E + E+ I ++L
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL-D 100
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
+ +VV F+ FEDD++VY+ +E+C LL+ L R+ + TE +
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLE----------------LHKRRKA-VTEPE 143
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQ 274
A +RQ ++ H + ++HRD+K N +D +K DFGL+ I+ G++ +
Sbjct: 144 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDGERKK 200
Query: 275 DIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
+ G+ Y+APEVL +K E D+WS+G I Y LL G+ PF + + +N+
Sbjct: 201 TLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS 260
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 383
R I+ A ++++L DP R + A+ L+ + G +P
Sbjct: 261 VPR----HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 306
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 142/290 (48%), Gaps = 27/290 (9%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+RY G+ LG G F Y TD + A K + K+ ++ P E + E+ I ++L
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL-D 100
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
+ +VV F+ FEDD++VY+ +E+C LL+ L R+ + TE +
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLE----------------LHKRRKA-VTEPE 143
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQ 274
A +RQ ++ H + ++HRD+K N +D +K DFGL+ I+ G++ +
Sbjct: 144 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDGERKK 200
Query: 275 DIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
+ G+ Y+APEVL +K E D+WS+G I Y LL G+ PF + + +N+
Sbjct: 201 XLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS 260
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 383
R I+ A ++++L DP R + A+ L+ + G +P
Sbjct: 261 VPR----HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 306
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 132/292 (45%), Gaps = 37/292 (12%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-----VKR 145
+ ++ ++Y+ LG G FG+ + A DK V VK I+K K++ +ED V
Sbjct: 19 EGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTL 78
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAI 205
E+ IL + H N++K + FE+ + + ME + G LD F I
Sbjct: 79 EIAILSRVE-HANIIKVLDIFENQGFFQLVME--KHGSGLDL--------------FAFI 121
Query: 206 RKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 265
+ R E A+ + RQ++ L ++HRD+K EN + ED ++K DFG +
Sbjct: 122 DRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI---AEDFTIKLIDFGSAA 178
Query: 266 FIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGI 323
+++ GK F G+ Y APEVL GPE ++WS+GV Y L+ PF +
Sbjct: 179 YLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE------ 232
Query: 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
L + P +S V LL P R T + ++ PWV +
Sbjct: 233 ----LEETVEAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ 280
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 143/285 (50%), Gaps = 29/285 (10%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G F + +D + A K + K+ ++ P E + E+ I ++LA H++VV F
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGF 104
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
+ FED+++V++ +ELC LL+ L R+ + TE +A +RQ
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLE----------------LHKRRKA-LTEPEARYYLRQ 147
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAY 281
++ H + ++HRD+K N ED +K DFGL+ ++ G++ + + G+
Sbjct: 148 IVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPN 204
Query: 282 YVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-LRNKPDFRRKPW 339
Y+APEVL +K E DVWSIG I Y LL G+ PF E KE LR K + P
Sbjct: 205 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----ETSCLKETYLRIKKNEYSIPK 260
Query: 340 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 384
I+ A ++K+L DP AR T + L+ + G + +PI
Sbjct: 261 -HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPI 304
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 143/285 (50%), Gaps = 29/285 (10%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G F + +D + A K + K+ ++ P E + E+ I ++LA H++VV F
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGF 80
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
+ FED+++V++ +ELC LL+ L R+ + TE +A +RQ
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSLLE----------------LHKRRKA-LTEPEARYYLRQ 123
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAY 281
++ H + ++HRD+K N ED +K DFGL+ ++ G++ + + G+
Sbjct: 124 IVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPN 180
Query: 282 YVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-LRNKPDFRRKPW 339
Y+APEVL +K E DVWSIG I Y LL G+ PF E KE LR K + P
Sbjct: 181 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----ETSCLKETYLRIKKNEYSIPK 236
Query: 340 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 384
I+ A ++K+L DP AR T + L+ + G + +PI
Sbjct: 237 -HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPI 280
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 143/285 (50%), Gaps = 29/285 (10%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G F + +D + A K + K+ ++ P E + E+ I ++LA H++VV F
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGF 106
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
+ FED+++V++ +ELC LL+ L R+ + TE +A +RQ
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLE----------------LHKRRKA-LTEPEARYYLRQ 149
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAY 281
++ H + ++HRD+K N ED +K DFGL+ ++ G++ + + G+
Sbjct: 150 IVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPN 206
Query: 282 YVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-LRNKPDFRRKPW 339
Y+APEVL +K E DVWSIG I Y LL G+ PF E KE LR K + P
Sbjct: 207 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----ETSCLKETYLRIKKNEYSIPK 262
Query: 340 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 384
I+ A ++K+L DP AR T + L+ + G + +PI
Sbjct: 263 -HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPI 306
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 138/276 (50%), Gaps = 28/276 (10%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G G +A +K +G +VAVK ++ K E + EV I++ H NVV+ Y
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ---RRELLFNEVVIMRDYQ-HFNVVEMY 108
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
++ +++ ME +GG L D I R E+ A V +
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTD------------------IVSQVRLNEEQIATVCEAV 150
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYY 282
L+ A H G++HRD+K ++ L D +K +DFG I K K + +VG+ Y+
Sbjct: 151 LQALAYLHAQGVIHRDIKSDSILLTL---DGRVKLSDFGFCAQISKDVPKRKXLVGTPYW 207
Query: 283 VAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 341
+APEV+ R E D+WS+G++ ++ G P++ + K LR+ P + K
Sbjct: 208 MAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR-LRDSPPPKLKNSHK 266
Query: 342 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377
+S +DF++++LV+DP+ R TA + L HP++ + G
Sbjct: 267 VSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTG 302
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 134/284 (47%), Gaps = 33/284 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I + LG G FG ++ + NG A+K ++K ++ VE E +++ ++ H
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDE-RLMLSIVTHP 66
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+++ + F+D +++ M+ EGGEL F +RK R+ A
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGEL-----------------FSLLRKSQRFPNPVAK 109
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
++ H +++RD+KPEN L ++ +K TDFG + ++ P + +
Sbjct: 110 FYAAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYV-PDVTYX-LC 164
Query: 278 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336
G+ Y+APEV+ K +S D WS G++ Y +L G PF+D ++++L + F
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP- 223
Query: 337 KPWPSISNSAKDFVKKLLVKDPRARLTAAQ-----ALSHPWVRE 375
P + KD + +L+ +D RL Q +HPW +E
Sbjct: 224 ---PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 264
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 36/283 (12%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA--VEDVKREVKILQALAGHENVVK 161
LG G +G Y A K G VA+K++ P+ ++++ +E+ I+Q +VVK
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQV-------PVESDLQEIIKEISIMQQ-CDSPHVVK 88
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+Y ++ + ++I ME C G + D I ++ + TLT E + A +++
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDII--RLRNKTLT--------------EDEIATILQ 132
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 280
L+ H +HRD+K N L + + K DFG++ K ++G+
Sbjct: 133 STLKGLEYLHFMRKIHRDIKAGNILLNT---EGHAKLADFGVAGQLTDXMAKRNXVIGTP 189
Query: 281 YYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP- 338
+++APEV++ +D+WS+G+ + G+ P+ D + N P RKP
Sbjct: 190 FWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPE 249
Query: 339 -WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 380
W S++ DFVK+ LVK P R TA Q L HP+VR S
Sbjct: 250 LW---SDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVS 289
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 27/268 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K + K +I V E ++LQ H +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
AF+ + + ME GGEL F + ++ +TE+ A
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGEL-----------------FFHLSRERVFTEERARFYGA 112
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 280
+++ H +V+RD+K EN + +D +K TDFGL + I G + G+
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTP 169
Query: 281 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339
Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR--- 226
Query: 340 PSISNSAKDFVKKLLVKDPRARLTAAQA 367
++S AK + LL KDP+ RL +
Sbjct: 227 -TLSPEAKSLLAGLLKKDPKQRLGGGPS 253
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 27/268 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K + K +I V E ++LQ H +
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 72
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
AF+ + + ME GGEL F + ++ +TE+ A
Sbjct: 73 LKYAFQTHDRLCFVMEYANGGEL-----------------FFHLSRERVFTEERARFYGA 115
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 280
+++ H +V+RD+K EN + +D +K TDFGL + I G + G+
Sbjct: 116 EIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTP 172
Query: 281 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339
Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R
Sbjct: 173 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR--- 229
Query: 340 PSISNSAKDFVKKLLVKDPRARLTAAQA 367
++S AK + LL KDP+ RL +
Sbjct: 230 -TLSPEAKSLLAGLLKKDPKQRLGGGPS 256
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 127/294 (43%), Gaps = 51/294 (17%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G G +K ++ A+K ++ +REV++ + ++V+
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIVR 75
Query: 162 FYNAFED----DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+ +E+ + I ME +GGEL RI R D +TE++A+
Sbjct: 76 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQD---------------RGDQAFTEREAS 120
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+++ + H + HRD+KPEN L+ S + ++ LK TDFG
Sbjct: 121 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-------------- 166
Query: 278 GSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPD 333
A E K D+WS+GVI YILLCG PF+ G+ + + +
Sbjct: 167 ------AKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 220
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 387
F W +S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 221 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 274
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 27/268 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K + K +I V E ++LQ H +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
AF+ + + ME GGEL F + ++ +TE+ A
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGEL-----------------FFHLSRERVFTEERARFYGA 112
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 280
+++ H +V+RD+K EN + +D +K TDFGL + I G + G+
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKXFCGTP 169
Query: 281 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339
Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR--- 226
Query: 340 PSISNSAKDFVKKLLVKDPRARLTAAQA 367
++S AK + LL KDP+ RL +
Sbjct: 227 -TLSPEAKSLLAGLLKKDPKQRLGGGPS 253
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 27/268 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K + K +I V E ++LQ H +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
AF+ + + ME GGEL F + ++ +TE+ A
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGEL-----------------FFHLSRERVFTEERARFYGA 112
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 280
+++ H +V+RD+K EN + +D +K TDFGL + I G + G+
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTP 169
Query: 281 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339
Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR--- 226
Query: 340 PSISNSAKDFVKKLLVKDPRARLTAAQA 367
++S AK + LL KDP+ RL +
Sbjct: 227 -TLSPEAKSLLAGLLKKDPKQRLGGGPS 253
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 27/268 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K + K +I V E ++LQ H +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
AF+ + + ME GGEL F + ++ +TE+ A
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGEL-----------------FFHLSRERVFTEERARFYGA 112
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 280
+++ H +V+RD+K EN + +D +K TDFGL + I G + G+
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKXFCGTP 169
Query: 281 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339
Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR--- 226
Query: 340 PSISNSAKDFVKKLLVKDPRARLTAAQA 367
++S AK + LL KDP+ RL +
Sbjct: 227 -TLSPEAKSLLAGLLKKDPKQRLGGGPS 253
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 27/268 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K + K +I V E ++LQ H +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
AF+ + + ME GGEL F + ++ +TE+ A
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGEL-----------------FFHLSRERVFTEERARFYGA 112
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 280
+++ H +V+RD+K EN + +D +K TDFGL + I G + G+
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKXFCGTP 169
Query: 281 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339
Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR--- 226
Query: 340 PSISNSAKDFVKKLLVKDPRARLTAAQA 367
++S AK + LL KDP+ RL +
Sbjct: 227 -TLSPEAKSLLAGLLKKDPKQRLGGGPS 253
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 27/268 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K + K +I V E ++LQ H +
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 74
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
AF+ + + ME GGEL F + ++ +TE+ A
Sbjct: 75 LKYAFQTHDRLCFVMEYANGGEL-----------------FFHLSRERVFTEERARFYGA 117
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 280
+++ H +V+RD+K EN + +D +K TDFGL + I G + G+
Sbjct: 118 EIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKXFCGTP 174
Query: 281 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339
Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR--- 231
Query: 340 PSISNSAKDFVKKLLVKDPRARLTAAQA 367
++S AK + LL KDP+ RL +
Sbjct: 232 -TLSPEAKSLLAGLLKKDPKQRLGGGPS 258
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 140/303 (46%), Gaps = 39/303 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ + +L+G+G +G Y G A+K ++ + E++K+E+ +L+ + H
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINMLKKYSHHR 81
Query: 158 NVVKFYNAFED------DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
N+ +Y AF D+ +++ ME C G + D ++ TL W
Sbjct: 82 NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTD-LIKNTKGNTLKEEWI--------- 131
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPG 270
A + R++LR + H H ++HRD+K +N L E++ +K DFG+S + +
Sbjct: 132 -----AYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQLDRTV 183
Query: 271 KKFQDIVGSAYYVAPEVLKRKSGPE------SDVWSIGVITYILLCGRRPFWDKTEDGIF 324
+ +G+ Y++APEV+ P+ SD+WS+G+ + G P D
Sbjct: 184 GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL 243
Query: 325 KEVLRN-KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 383
+ RN P + K W S + F++ LVK+ R Q + HP++R+ + ++
Sbjct: 244 FLIPRNPAPRLKSKKW---SKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNERQVR 300
Query: 384 IDI 386
I +
Sbjct: 301 IQL 303
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 129/282 (45%), Gaps = 32/282 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G FG +A K GD AVK ++K+ ++ VE E +IL H + +
Sbjct: 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 88
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+ F+ + ++ ME GG+L+ I+K R+ E A
Sbjct: 89 LFCCFQTPDRLFFVMEFVNGGDLM-----------------FHIQKSRRFDEARARFYAA 131
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 280
+++ H G+++RD+K +N L + K DFG+ + I G G+
Sbjct: 132 EIISALMFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGICNGVTTATFCGTP 188
Query: 281 YYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339
Y+APE+L+ GP D W++GV+ Y +LCG PF + ED +F+ +L ++ + W
Sbjct: 189 DYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY--PTW 246
Query: 340 PSISNSAKDFVKKLLVKDPRARLTAAQ------ALSHPWVRE 375
+ A +K + K+P RL + L HP+ +E
Sbjct: 247 --LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKE 286
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 150/347 (43%), Gaps = 77/347 (22%)
Query: 84 KRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDV 143
KR + DF + LLG G +G AT K G+ VA+KKIE P+
Sbjct: 3 KRIVYNISSDFQ----LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDK--PLFALRT 56
Query: 144 KREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLT 198
RE+KIL+ HEN++ +N +FE+ N VYI EL + L ++IST +
Sbjct: 57 LREIKILKHFK-HENIITIFNIQRPDSFENFNEVYIIQELMQTD------LHRVISTQML 109
Query: 199 SAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 258
S + + Q LR H ++HRD+KP N L S + LK
Sbjct: 110 S-------------DDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKV 153
Query: 259 TDFGLSDFI--------KPGKK---FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVIT 305
DFGL+ I +P + + V + +Y APEV+ K DVWS G I
Sbjct: 154 CDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCIL 213
Query: 306 YILLCGRRPFWDKTED--------GIF-----------------KEVLRNKPDFRRKP-- 338
L RRP + + GI +E +++ P + P
Sbjct: 214 AELFL-RRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLE 272
Query: 339 --WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 383
+P ++ D ++++LV DP R+TA +AL HP+++ D ++ P
Sbjct: 273 KMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEP 319
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 150/347 (43%), Gaps = 77/347 (22%)
Query: 84 KRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDV 143
KR + DF + LLG G +G AT K G+ VA+KKIE P+
Sbjct: 3 KRIVYNISSDFQ----LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDK--PLFALRT 56
Query: 144 KREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLT 198
RE+KIL+ HEN++ +N +FE+ N VYI EL + L ++IST +
Sbjct: 57 LREIKILKHFK-HENIITIFNIQRPDSFENFNEVYIIQELMQTD------LHRVISTQML 109
Query: 199 SAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 258
S + + Q LR H ++HRD+KP N L S + LK
Sbjct: 110 S-------------DDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKV 153
Query: 259 TDFGLSDFI--------KPGKK---FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVIT 305
DFGL+ I +P + + V + +Y APEV+ K DVWS G I
Sbjct: 154 CDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCIL 213
Query: 306 YILLCGRRPFWDKTED--------GIF-----------------KEVLRNKPDFRRKP-- 338
L RRP + + GI +E +++ P + P
Sbjct: 214 AELFL-RRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLE 272
Query: 339 --WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 383
+P ++ D ++++LV DP R+TA +AL HP+++ D ++ P
Sbjct: 273 KMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEP 319
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 150/347 (43%), Gaps = 77/347 (22%)
Query: 84 KRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDV 143
KR + DF + LLG G +G AT K G+ VA+KKIE P+
Sbjct: 3 KRIVYNISSDFQ----LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDK--PLFALRT 56
Query: 144 KREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLT 198
RE+KIL+ HEN++ +N +FE+ N VYI EL + L ++IST +
Sbjct: 57 LREIKILKHFK-HENIITIFNIQRPDSFENFNEVYIIQELMQTD------LHRVISTQML 109
Query: 199 SAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 258
S + + Q LR H ++HRD+KP N L S + LK
Sbjct: 110 S-------------DDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKV 153
Query: 259 TDFGLSDFI--------KPGKK---FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVIT 305
DFGL+ I +P + + V + +Y APEV+ K DVWS G I
Sbjct: 154 CDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCIL 213
Query: 306 YILLCGRRPFWDKTED--------GIF-----------------KEVLRNKPDFRRKP-- 338
L RRP + + GI +E +++ P + P
Sbjct: 214 AELFL-RRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLE 272
Query: 339 --WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 383
+P ++ D ++++LV DP R+TA +AL HP+++ D ++ P
Sbjct: 273 KMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEP 319
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 130/269 (48%), Gaps = 32/269 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K ++K ++ V E ++LQ + H +
Sbjct: 157 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 215
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+ + + ME GGEL F + ++ ++E A
Sbjct: 216 LKYSFQTHDRLCFVMEYANGGEL-----------------FFHLSRERVFSEDRARFYGA 258
Query: 222 QMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIV 277
++ V+A +LH +V+RD+K EN + +D +K TDFGL + IK G +
Sbjct: 259 EI--VSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKTFC 313
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336
G+ Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R
Sbjct: 314 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 373
Query: 337 KPWPSISNSAKDFVKKLLVKDPRARLTAA 365
++ AK + LL KDP+ RL
Sbjct: 374 ----TLGPEAKSLLSGLLKKDPKQRLGGG 398
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 130/269 (48%), Gaps = 32/269 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K ++K ++ V E ++LQ + H +
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 212
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+ + + ME GGEL F + ++ ++E A
Sbjct: 213 LKYSFQTHDRLCFVMEYANGGEL-----------------FFHLSRERVFSEDRARFYGA 255
Query: 222 QMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIV 277
++ V+A +LH +V+RD+K EN + +D +K TDFGL + IK G +
Sbjct: 256 EI--VSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKTFC 310
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336
G+ Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R
Sbjct: 311 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 370
Query: 337 KPWPSISNSAKDFVKKLLVKDPRARLTAA 365
++ AK + LL KDP+ RL
Sbjct: 371 ----TLGPEAKSLLSGLLKKDPKQRLGGG 395
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 130/269 (48%), Gaps = 32/269 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K ++K ++ V E ++LQ + H +
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 73
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+ + + ME GGEL F + ++ ++E A
Sbjct: 74 LKYSFQTHDRLCFVMEYANGGEL-----------------FFHLSRERVFSEDRARFYGA 116
Query: 222 QMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIV 277
++ V+A +LH +V+RD+K EN + +D +K TDFGL + IK G +
Sbjct: 117 EI--VSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKXFC 171
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336
G+ Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 231
Query: 337 KPWPSISNSAKDFVKKLLVKDPRARLTAA 365
++ AK + LL KDP+ RL
Sbjct: 232 ----TLGPEAKSLLSGLLKKDPKQRLGGG 256
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 130/269 (48%), Gaps = 32/269 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K ++K ++ V E ++LQ + H +
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 72
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+ + + ME GGEL F + ++ ++E A
Sbjct: 73 LKYSFQTHDRLCFVMEYANGGEL-----------------FFHLSRERVFSEDRARFYGA 115
Query: 222 QMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIV 277
++ V+A +LH +V+RD+K EN + +D +K TDFGL + IK G +
Sbjct: 116 EI--VSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKXFC 170
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336
G+ Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R
Sbjct: 171 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 230
Query: 337 KPWPSISNSAKDFVKKLLVKDPRARLTAA 365
++ AK + LL KDP+ RL
Sbjct: 231 ----TLGPEAKSLLSGLLKKDPKQRLGGG 255
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 130/269 (48%), Gaps = 32/269 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K ++K ++ V E ++LQ + H +
Sbjct: 16 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 74
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+ + + ME GGEL F + ++ ++E A
Sbjct: 75 LKYSFQTHDRLCFVMEYANGGEL-----------------FFHLSRERVFSEDRARFYGA 117
Query: 222 QMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIV 277
++ V+A +LH +V+RD+K EN + +D +K TDFGL + IK G +
Sbjct: 118 EI--VSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKXFC 172
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336
G+ Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R
Sbjct: 173 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 232
Query: 337 KPWPSISNSAKDFVKKLLVKDPRARLTAA 365
++ AK + LL KDP+ RL
Sbjct: 233 ----TLGPEAKSLLSGLLKKDPKQRLGGG 257
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 137/288 (47%), Gaps = 36/288 (12%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D ++YT + +G G G Y A D A G VA++++ + K+E+ I +
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ--------QQPKKELIINEI 68
Query: 153 LAGHE----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
L E N+V + +++ + +++ ME GG L D + +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD------------------VVTE 110
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
+ E A V R+ L+ H + ++HRD+K +N L D S+K TDFG I
Sbjct: 111 TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQIT 167
Query: 269 PGK-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
P + K ++VG+ Y++APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++
Sbjct: 168 PEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
+ N + P +S +DF+ + L D R +A + L H +++
Sbjct: 228 IATNGTPELQNP-EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 136/288 (47%), Gaps = 36/288 (12%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D ++YT + +G G G Y A D A G VA++++ + K+E+ I +
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ--------QQPKKELIINEI 68
Query: 153 LAGHE----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
L E N+V + +++ + +++ ME GG L D + +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD------------------VVTE 110
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
+ E A V R+ L+ H + ++HRD+K +N L D S+K TDFG I
Sbjct: 111 TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQIT 167
Query: 269 PGK-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
P + K +VG+ Y++APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++
Sbjct: 168 PEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
+ N + P +S +DF+ + L D R +A + L H +++
Sbjct: 228 IATNGTPELQNP-EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLK 274
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 136/288 (47%), Gaps = 36/288 (12%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D ++YT + +G G G Y A D A G VA++++ + K+E+ I +
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ--------QQPKKELIINEI 68
Query: 153 LAGHE----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
L E N+V + +++ + +++ ME GG L D + +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD------------------VVTE 110
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
+ E A V R+ L+ H + ++HRD+K +N L D S+K TDFG I
Sbjct: 111 TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQIT 167
Query: 269 PGK-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
P + K +VG+ Y++APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++
Sbjct: 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
+ N + P +S +DF+ + L D R +A + L H +++
Sbjct: 228 IATNGTPELQNP-EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 136/288 (47%), Gaps = 36/288 (12%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D ++YT + +G G G Y A D A G VA++++ + K+E+ I +
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ--------QQPKKELIINEI 69
Query: 153 LAGHE----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
L E N+V + +++ + +++ ME GG L D + +
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD------------------VVTE 111
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
+ E A V R+ L+ H + ++HRD+K +N L D S+K TDFG I
Sbjct: 112 TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQIT 168
Query: 269 PGK-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
P + K +VG+ Y++APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++
Sbjct: 169 PEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 228
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
+ N + P +S +DF+ + L D R +A + + H +++
Sbjct: 229 IATNGTPELQNP-EKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 134/308 (43%), Gaps = 54/308 (17%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA---------------- 139
+YT+ +G G +G +A ++ + A+K + K K+I
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 140 -------VEDVKREVKILQALAGHENVVKFYNAFEDDN--YVYIAMELCEGGELLDRILA 190
+E V +E+ IL+ L H NVVK +D N ++Y+ EL G +++
Sbjct: 73 CIQPRGPIEQVYQEIAILKKL-DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL 131
Query: 191 KMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250
K +S +F + K Y H ++HRD+KP N L
Sbjct: 132 KPLSEDQARFYFQDLIKGIEYL------------------HYQKIIHRDIKPSNLL---V 170
Query: 251 KEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVL----KRKSGPESDVWSIGVIT 305
ED +K DFG+S+ K + VG+ ++APE L K SG DVW++GV
Sbjct: 171 GEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
Query: 306 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 365
Y + G+ PF D+ + ++ +F +P I+ KD + ++L K+P +R+
Sbjct: 231 YCFVFGQCPFMDERIMCLHSKIKSQALEFPDQP--DIAEDLKDLITRMLDKNPESRIVVP 288
Query: 366 QALSHPWV 373
+ HPWV
Sbjct: 289 EIKLHPWV 296
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 133/292 (45%), Gaps = 35/292 (11%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D D + + I LG G FG Y A +K G A K IE +ED E++IL
Sbjct: 14 DLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEIL 70
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
A H +VK A+ D ++I +E C GG + D I+ ++ D
Sbjct: 71 -ATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLEL---------------DRG 113
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKP 269
TE VV RQML H ++HRD+K N L + ++ DFG+S +K
Sbjct: 114 LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTL---EGDIRLADFGVSAKNLKT 170
Query: 270 GKKFQDIVGSAYYVAPEVL---KRKSGP---ESDVWSIGVITYILLCGRRPFWDKTEDGI 323
+K +G+ Y++APEV+ K P ++D+WS+G+ + P + +
Sbjct: 171 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV 230
Query: 324 FKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
++ ++ P P W S +DF+K L K+P R +AAQ L HP+V
Sbjct: 231 LLKIAKSDPPTLLTPSKW---SVEFRDFLKIALDKNPETRPSAAQLLEHPFV 279
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 133/292 (45%), Gaps = 35/292 (11%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D D + + I LG G FG Y A +K G A K IE +ED E++IL
Sbjct: 6 DLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEIL 62
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
A H +VK A+ D ++I +E C GG + D I+ ++ D
Sbjct: 63 -ATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLEL---------------DRG 105
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKP 269
TE VV RQML H ++HRD+K N L + ++ DFG+S +K
Sbjct: 106 LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTL---EGDIRLADFGVSAKNLKT 162
Query: 270 GKKFQDIVGSAYYVAPEVL---KRKSGP---ESDVWSIGVITYILLCGRRPFWDKTEDGI 323
+K +G+ Y++APEV+ K P ++D+WS+G+ + P + +
Sbjct: 163 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV 222
Query: 324 FKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
++ ++ P P W S +DF+K L K+P R +AAQ L HP+V
Sbjct: 223 LLKIAKSDPPTLLTPSKW---SVEFRDFLKIALDKNPETRPSAAQLLEHPFV 271
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 147/334 (44%), Gaps = 43/334 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ + K+LG G FG ++A K A+K ++K+ +++ VE E ++L H
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+ + F+ ++ ME GG+L+ I+ ++ A
Sbjct: 80 FLTHMFCTFQTKENLFFVMEYLNGGDLM-----------------YHIQSCHKFDLSRAT 122
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-KKFQDI 276
+++ H G+V+RD+K +N L +D +K DFG+ G K +
Sbjct: 123 FYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNEF 179
Query: 277 VGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335
G+ Y+APE+ L +K D WS GV+ Y +L G+ PF + E+ +F + + P +
Sbjct: 180 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP 239
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL-SHPWVREGG----DASEI-------- 382
R W + AKD + KL V++P RL + HP RE + EI
Sbjct: 240 R--W--LEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKV 295
Query: 383 --PIDISVLNNMRQFVKYSRLKQFALRALASTLD 414
P D S N ++F+ FA RAL +++D
Sbjct: 296 KSPFDCS--NFDKEFLNEKPRLXFADRALINSMD 327
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 136/288 (47%), Gaps = 36/288 (12%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D ++YT + +G G G Y A D A G VA++++ + K+E+ I +
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ--------QQPKKELIINEI 69
Query: 153 LAGHE----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
L E N+V + +++ + +++ ME GG L D + +
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD------------------VVTE 111
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
+ E A V R+ L+ H + ++HR++K +N L D S+K TDFG I
Sbjct: 112 TCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGM---DGSVKLTDFGFCAQIT 168
Query: 269 PGK-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
P + K +VG+ Y++APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++
Sbjct: 169 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 228
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
+ N + P +S +DF+ + L D R +A + + H +++
Sbjct: 229 IATNGTPELQNP-EKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 133/281 (47%), Gaps = 39/281 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G FG Y A +K A K I+ +ED E+ IL A H N+VK
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDIL-ASCDHPNIVKLL 100
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+AF +N ++I +E C GG + D ++ ++ + TE VV +Q
Sbjct: 101 DAFYYENNLWILIEFCAGGAV-DAVMLEL---------------ERPLTESQIQVVCKQT 144
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ---DIVGSA 280
L H + ++HRD+K N LF D +K DFG+S K + Q +G+
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFTL---DGDIKLADFGVS--AKNTRXIQRRDSFIGTP 199
Query: 281 YYVAPEVLKRKSGPE------SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334
Y++APEV+ ++ + +DVWS+G+ + P + + ++ +++P
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPT 259
Query: 335 RRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
+P W S++ KDF+KK L K+ AR T +Q L HP+V
Sbjct: 260 LAQPSRW---SSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 133/281 (47%), Gaps = 39/281 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G FG Y A +K A K I+ +ED E+ IL A H N+VK
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDIL-ASCDHPNIVKLL 100
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+AF +N ++I +E C GG + D ++ ++ + TE VV +Q
Sbjct: 101 DAFYYENNLWILIEFCAGGAV-DAVMLEL---------------ERPLTESQIQVVCKQT 144
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ---DIVGSA 280
L H + ++HRD+K N LF D +K DFG+S K + Q +G+
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFTL---DGDIKLADFGVS--AKNTRTIQRRDSFIGTP 199
Query: 281 YYVAPEVLKRKSGPE------SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334
Y++APEV+ ++ + +DVWS+G+ + P + + ++ +++P
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPT 259
Query: 335 RRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
+P W S++ KDF+KK L K+ AR T +Q L HP+V
Sbjct: 260 LAQPSRW---SSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 133/281 (47%), Gaps = 39/281 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G FG Y A +K A K I+ +ED E+ IL A H N+VK
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDIL-ASCDHPNIVKLL 100
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+AF +N ++I +E C GG + D ++ ++ + TE VV +Q
Sbjct: 101 DAFYYENNLWILIEFCAGGAV-DAVMLEL---------------ERPLTESQIQVVCKQT 144
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ---DIVGSA 280
L H + ++HRD+K N LF D +K DFG+S K + Q +G+
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFTL---DGDIKLADFGVS--AKNTRXIQRRDXFIGTP 199
Query: 281 YYVAPEVLKRKSGPE------SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334
Y++APEV+ ++ + +DVWS+G+ + P + + ++ +++P
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPT 259
Query: 335 RRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
+P W S++ KDF+KK L K+ AR T +Q L HP+V
Sbjct: 260 LAQPSRW---SSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 146/334 (43%), Gaps = 43/334 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ + K+LG G FG ++A K A+K ++K+ +++ VE E ++L H
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+ + F+ ++ ME GG+L+ I+ ++ A
Sbjct: 79 FLTHMFCTFQTKENLFFVMEYLNGGDLM-----------------YHIQSCHKFDLSRAT 121
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-KKFQDI 276
+++ H G+V+RD+K +N L +D +K DFG+ G K
Sbjct: 122 FYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNXF 178
Query: 277 VGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335
G+ Y+APE+ L +K D WS GV+ Y +L G+ PF + E+ +F + + P +
Sbjct: 179 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP 238
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL-SHPWVREGG----DASEI-------- 382
R W + AKD + KL V++P RL + HP RE + EI
Sbjct: 239 R--W--LEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKV 294
Query: 383 --PIDISVLNNMRQFVKYSRLKQFALRALASTLD 414
P D S N ++F+ FA RAL +++D
Sbjct: 295 KSPFDCS--NFDKEFLNEKPRLSFADRALINSMD 326
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 134/285 (47%), Gaps = 37/285 (12%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKR 145
G++K ++ + K+LG G FG ++ + D A+K ++K + + V K
Sbjct: 17 GHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR-TKM 75
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAI 205
E IL + H +VK + AF+ + +Y+ ++ GG+L R+
Sbjct: 76 ERDILVEV-NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL----------------- 117
Query: 206 RKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS- 264
K+ +TE+D + ++ H G+++RD+KPEN L E+ +K TDFGLS
Sbjct: 118 SKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSK 174
Query: 265 DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGI 323
+ I KK G+ Y+APEV+ R+ +S D WS GV+ + +L G PF K
Sbjct: 175 ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET 234
Query: 324 FKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 365
+L+ K P F +S A+ ++ L ++P RL A
Sbjct: 235 MTMILKAKLGMPQF-------LSPEAQSLLRMLFKRNPANRLGAG 272
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 134/285 (47%), Gaps = 37/285 (12%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKR 145
G++K ++ + K+LG G FG ++ + D A+K ++K + + V K
Sbjct: 17 GHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR-TKM 75
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAI 205
E IL + H +VK + AF+ + +Y+ ++ GG+L R+
Sbjct: 76 ERDILVEV-NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL----------------- 117
Query: 206 RKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS- 264
K+ +TE+D + ++ H G+++RD+KPEN L E+ +K TDFGLS
Sbjct: 118 SKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSK 174
Query: 265 DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGI 323
+ I KK G+ Y+APEV+ R+ +S D WS GV+ + +L G PF K
Sbjct: 175 ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET 234
Query: 324 FKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 365
+L+ K P F +S A+ ++ L ++P RL A
Sbjct: 235 MTMILKAKLGMPQF-------LSPEAQSLLRMLFKRNPANRLGAG 272
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 134/285 (47%), Gaps = 37/285 (12%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKR 145
G++K ++ + K+LG G FG ++ + D A+K ++K + + V K
Sbjct: 18 GHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR-TKM 76
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAI 205
E IL + H +VK + AF+ + +Y+ ++ GG+L R+
Sbjct: 77 ERDILVEV-NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL----------------- 118
Query: 206 RKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS- 264
K+ +TE+D + ++ H G+++RD+KPEN L E+ +K TDFGLS
Sbjct: 119 SKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSK 175
Query: 265 DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGI 323
+ I KK G+ Y+APEV+ R+ +S D WS GV+ + +L G PF K
Sbjct: 176 ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET 235
Query: 324 FKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 365
+L+ K P F +S A+ ++ L ++P RL A
Sbjct: 236 MTMILKAKLGMPQF-------LSPEAQSLLRMLFKRNPANRLGAG 273
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 130/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 92
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 93 LEFSFKDNSNLYMVMEYVAGGEM-----------------FSHLRRIGRFSEPHARFYAA 135
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L E ++ TDFG + +K G+ + + G+
Sbjct: 136 QIVLTFEYLHSLDLIYRDLKPENLLI---DEQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 190
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 191 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 245
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 246 SHFSSDLKDLLRNLLQVDLTKRF 268
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 130/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEM-----------------FSHLRRIGRFSEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEM-----------------FSHLRRIGRFSEPHARFYAA 149
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN + + +K TDFG + +K G+ + + G+
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPE 204
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 259
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 260 SHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEM-----------------FSHLRRIGRFSEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEM-----------------FSHLRRIGRFSEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 130/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEM-----------------FSHLRRIGRFSEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LAGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEM-----------------FSHLRRIGRFSEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 130/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEM-----------------FSHLRRIGRFSEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 130/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEM-----------------FSHLRRIGRFSEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 130/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 107 LEFSFKDNSNLYMVMEYVAGGEM-----------------FSHLRRIGRFSEPHARFYAA 149
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 204
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 259
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 260 SHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 143/318 (44%), Gaps = 58/318 (18%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIE---KNKMILPIAVEDVKRE 146
Y + +Y + +G G +G Y A D + G VA+K+I +++ I A+ RE
Sbjct: 15 YFQGLMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAI----RE 69
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
+ +L+ L H N+V + + + + E E + L K++ T
Sbjct: 70 ISLLKELH-HPNIVSLIDVIHSERCLTLVFEFME------KDLKKVLDENKTGL------ 116
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-D 265
+DS+ + + Q+LR A CH H ++HRD+KP+N L S D +LK DFGL+
Sbjct: 117 QDSQ-----IKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINS---DGALKLADFGLARA 168
Query: 266 FIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 323
F P + + V + +Y AP+VL +K D+WSIG I ++ G+ F T+D
Sbjct: 169 FGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ 228
Query: 324 FKEVL--------RNKPD--------------FRRKPW----PSISNSAKDFVKKLLVKD 357
++ R P F +KPW P D + +L D
Sbjct: 229 LPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFD 288
Query: 358 PRARLTAAQALSHPWVRE 375
P R++A A++HP+ ++
Sbjct: 289 PNKRISARDAMNHPYFKD 306
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 130/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEM-----------------FSHLRRIGRFSEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 98
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEM-----------------FSHLRRIGRFSEPHARFYAA 141
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 142 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 196
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 251
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 252 SHFSSDLKDLLRNLLQVDLTKRF 274
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 68 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 126
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 127 LEFSFKDNSNLYMVMEYVPGGEM-----------------FSHLRRIGRFSEPHARFYAA 169
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 170 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 224
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 279
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 280 SHFSSDLKDLLRNLLQVDLTKRF 302
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 143/318 (44%), Gaps = 58/318 (18%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIE---KNKMILPIAVEDVKRE 146
Y + +Y + +G G +G Y A D + G VA+K+I +++ I A+ RE
Sbjct: 15 YFQGLMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAI----RE 69
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
+ +L+ L H N+V + + + + E E + L K++ T
Sbjct: 70 ISLLKELH-HPNIVSLIDVIHSERCLTLVFEFME------KDLKKVLDENKTGL------ 116
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-D 265
+DS+ + + Q+LR A CH H ++HRD+KP+N L S D +LK DFGL+
Sbjct: 117 QDSQ-----IKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINS---DGALKLADFGLARA 168
Query: 266 FIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 323
F P + + V + +Y AP+VL +K D+WSIG I ++ G+ F T+D
Sbjct: 169 FGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ 228
Query: 324 FKEVL--------RNKPD--------------FRRKPW----PSISNSAKDFVKKLLVKD 357
++ R P F +KPW P D + +L D
Sbjct: 229 LPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFD 288
Query: 358 PRARLTAAQALSHPWVRE 375
P R++A A++HP+ ++
Sbjct: 289 PNKRISARDAMNHPYFKD 306
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEM-----------------FSHLRRIGRFSEPHARFYAA 149
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 204
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 259
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 260 SHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 130/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEM-----------------FSHLRRIGRFSEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LXGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 127/263 (48%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 126
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEM-----------------FSHLRRIGRFSEPHARFYAA 169
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K + G+
Sbjct: 170 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGAT--WTLCGTPE 224
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 279
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 280 SHFSSDLKDLLRNLLQVDLTKRF 302
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEM-----------------FSHLRRIGRFSEPHARFYAA 149
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 204
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 259
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 260 SHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 130/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEM-----------------FSHLRRIGRFSEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEM-----------------FSHLRRIGRFSEPHARFYAA 149
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 204
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 259
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 260 SHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 36/288 (12%)
Query: 98 YTIGKLLGHGQFGYTYVA--TDKANGDRVAVKKIEKNKMILPIA--VEDVKREVKILQAL 153
+ + ++LG G +G + AN ++ K+ K MI+ A K E IL+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H +V AF+ +Y+ +E GGEL F+ + ++ + E
Sbjct: 79 K-HPFIVDLIYAFQTGGKLYLILEYLSGGEL-----------------FMQLEREGIFME 120
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKK 272
A + ++ H G+++RD+KPEN + +K TDFGL + I G
Sbjct: 121 DTACFYLAEISMALGHLHQKGIIYRDLKPENIML---NHQGHVKLTDFGLCKESIHDGTV 177
Query: 273 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331
G+ Y+APE+L R + D WS+G + Y +L G PF + ++L+ K
Sbjct: 178 THTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK 237
Query: 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVR 374
+ P ++ A+D +KKLL ++ +RL A + +HP+ R
Sbjct: 238 LNLP----PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEM-----------------FSHLRRIGRFSEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN + + +K TDFGL+ +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGLAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R+ E A
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEM-----------------FSHLRRIGRFAEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 126
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R+ E A
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEM-----------------FSHLRRIGRFXEPHARFYAA 169
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 170 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 224
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 279
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 280 SHFSSDLKDLLRNLLQVDLTKRF 302
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 36/288 (12%)
Query: 98 YTIGKLLGHGQFGYTYVA--TDKANGDRVAVKKIEKNKMILPIA--VEDVKREVKILQAL 153
+ + ++LG G +G + AN ++ K+ K MI+ A K E IL+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H +V AF+ +Y+ +E GGEL F+ + ++ + E
Sbjct: 79 K-HPFIVDLIYAFQTGGKLYLILEYLSGGEL-----------------FMQLEREGIFME 120
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKK 272
A + ++ H G+++RD+KPEN + +K TDFGL + I G
Sbjct: 121 DTACFYLAEISMALGHLHQKGIIYRDLKPENIML---NHQGHVKLTDFGLCKESIHDGTV 177
Query: 273 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331
G+ Y+APE+L R + D WS+G + Y +L G PF + ++L+ K
Sbjct: 178 THXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK 237
Query: 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVR 374
+ P ++ A+D +KKLL ++ +RL A + +HP+ R
Sbjct: 238 LNLP----PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 129/258 (50%), Gaps = 30/258 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEM-----------------FSHLRRIGRFSEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKD 357
S S+ KD ++ LL D
Sbjct: 259 SHFSSDLKDLLRNLLQVD 276
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R+ E A
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEM-----------------FSHLRRIGRFXEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 128/263 (48%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 98
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R+ E A
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEM-----------------FSHLRRIGRFXEPHARFYAA 141
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 142 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 196
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 251
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 252 SHFSSDLKDLLRNLLQVDLTKRF 274
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R+ E A
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEM-----------------FSHLRRIGRFXEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 100
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R+ E A
Sbjct: 101 LEFSFKDNSNLYMVMEYVAGGEM-----------------FSHLRRIGRFXEPHARFYAA 143
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 144 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 198
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 199 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 253
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 254 SHFSSDLKDLLRNLLQVDLTKRF 276
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R+ E A
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEM-----------------FSHLRRIGRFXEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 130/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEM-----------------FSHLRRIGRFSEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN + + ++ TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLII---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 132/285 (46%), Gaps = 37/285 (12%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVA---TDKANGDRVAVKKIEKNKMILPIAVEDVKR 145
G +K + + K+LG G FG ++ T +G A+K ++K + + V K
Sbjct: 21 GSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVR-TKM 79
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAI 205
E IL A H VVK + AF+ + +Y+ ++ GG+L R+
Sbjct: 80 ERDIL-ADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL----------------- 121
Query: 206 RKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS- 264
K+ +TE+D + ++ H G+++RD+KPEN L E+ +K TDFGLS
Sbjct: 122 SKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSK 178
Query: 265 DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGI 323
+ I KK G+ Y+APEV+ R+ S D WS GV+ + +L G PF K
Sbjct: 179 EAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKET 238
Query: 324 FKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 365
+L+ K P F +S A+ ++ L ++P RL +
Sbjct: 239 MTLILKAKLGMPQF-------LSTEAQSLLRALFKRNPANRLGSG 276
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 128/263 (48%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEM-----------------FSHLRRIGRFSEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN + + +K TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 129/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEM-----------------FSHLRRIGRFSEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN + + ++ TDFGL+ +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIQVTDFGLAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 129/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEM-----------------FSHLRRIGRFSEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+AP ++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 128/263 (48%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEM-----------------FSHLRRIGRFSEPHARFYAA 149
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWT-LCGTPE 204
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 259
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 260 SHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 128/263 (48%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEM-----------------FSHLRRIGRFSEPHARFYAA 149
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 204
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 259
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 260 SHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 142/282 (50%), Gaps = 45/282 (15%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGD--RVAVKKIEKNKMILPIA--VEDVKREVKILQAL 153
+ + K+LG G +G ++ + D ++ K+ K I+ A E + E ++L+ +
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 115
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
+V + AF+ + +++ ++ GGEL F + + R+TE
Sbjct: 116 RQSPFLVTLHYAFQTETKLHLILDYINGGEL-----------------FTHLSQRERFTE 158
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIK-PGK 271
+ + V +++ H G+++RD+K EN L S + + TDFGLS +F+ +
Sbjct: 159 HEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDS---NGHVVLTDFGLSKEFVADETE 215
Query: 272 KFQDIVGSAYYVAPEVLKRK-SGPES--DVWSIGVITYILLCGRRPFWDKTEDG------ 322
+ D G+ Y+AP++++ SG + D WS+GV+ Y LL G PF T DG
Sbjct: 216 RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF---TVDGEKNSQA 272
Query: 323 -IFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 362
I + +L+++P P+P +S AKD +++LL+KDP+ RL
Sbjct: 273 EISRRILKSEP-----PYPQEMSALAKDLIQRLLMKDPKKRL 309
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 128/263 (48%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEM-----------------FSHLRRIGRFSEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 128/263 (48%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEM-----------------FSHLRRIGRFSEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 128/263 (48%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEM-----------------FSHLRRIGRFSEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 128/263 (48%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 91
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 92 LEFSFKDNSNLYMVMEYVPGGEM-----------------FSHLRRIGRFSEPHARFYAA 134
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 135 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWT-LCGTPE 189
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 190 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 244
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 245 SHFSSDLKDLLRNLLQVDLTKRF 267
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 135/284 (47%), Gaps = 39/284 (13%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
IG+L G FG Y A +K A K I+ +ED E+ IL A H N+
Sbjct: 17 IGEL---GDFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDIL-ASCDHPNI 69
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVV 219
VK +AF +N ++I +E C GG + D ++ ++ + TE VV
Sbjct: 70 VKLLDAFYYENNLWILIEFCAGGAV-DAVMLEL---------------ERPLTESQIQVV 113
Query: 220 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--DFIKPGKKFQDIV 277
+Q L H + ++HRD+K N LF D +K DFG+S + ++ +
Sbjct: 114 CKQTLDALNYLHDNKIIHRDLKAGNILFTL---DGDIKLADFGVSAKNTRTXIQRRDSFI 170
Query: 278 GSAYYVAPEVLKRKSGPE------SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331
G+ Y++APEV+ ++ + +DVWS+G+ + P + + ++ +++
Sbjct: 171 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE 230
Query: 332 PDFRRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
P +P W S++ KDF+KK L K+ AR T +Q L HP+V
Sbjct: 231 PPTLAQPSRW---SSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 271
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 128/263 (48%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEM-----------------FSHLRRIGRFSEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 127/263 (48%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R+ E A
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEM-----------------FSHLRRIGRFXEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN + + +K TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 128/263 (48%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEM-----------------FSHLRRIGRFSEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN + + ++ TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 132/290 (45%), Gaps = 34/290 (11%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI 149
+ D ++ ++ + +GHG FG Y A D N + VA+KK+ + +D+ +EV+
Sbjct: 9 FKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRF 68
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
LQ L H N +++ + ++ ++ ME C G +++ L + K
Sbjct: 69 LQKLR-HPNTIQYRGCYLREHTAWLVMEYCLG----------------SASDLLEVHKKP 111
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 269
E + A V L+ A H H ++HRD+K N L E +K DFG + + P
Sbjct: 112 -LQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAP 167
Query: 270 GKKFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRP--FWDKTEDGI 323
F VG+ Y++APEV+ + + + DVWS+G IT I L R+P F +
Sbjct: 168 ANXF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSAL 223
Query: 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
+ P + W S ++FV L K P+ R T+ L H +V
Sbjct: 224 YHIAQNESPALQSGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 132/290 (45%), Gaps = 34/290 (11%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI 149
+ D ++ ++ + +GHG FG Y A D N + VA+KK+ + +D+ +EV+
Sbjct: 48 FKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRF 107
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
LQ L H N +++ + ++ ++ ME C G +++ L + K
Sbjct: 108 LQKLR-HPNTIQYRGCYLREHTAWLVMEYCLG----------------SASDLLEVHKKP 150
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 269
E + A V L+ A H H ++HRD+K N L E +K DFG + + P
Sbjct: 151 -LQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAP 206
Query: 270 GKKFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRP--FWDKTEDGI 323
F VG+ Y++APEV+ + + + DVWS+G IT I L R+P F +
Sbjct: 207 ANXF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSAL 262
Query: 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
+ P + W S ++FV L K P+ R T+ L H +V
Sbjct: 263 YHIAQNESPALQSGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 309
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 127/263 (48%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R+ E A
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEM-----------------FSHLRRIGRFXEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 127/263 (48%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R+ E A
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEM-----------------FSHLRRIGRFXEPHARFYAA 149
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 204
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 259
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 260 SHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 147/294 (50%), Gaps = 36/294 (12%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+D++ YTIG G +G K++G + K+++ M + + EV +L+
Sbjct: 6 EDYEVLYTIGT----GSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLR 60
Query: 152 ALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
L H N+V++Y+ D + +YI ME CEGG+L ++ +T K+
Sbjct: 61 ELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDL---------ASVITKG-----TKER 105
Query: 210 RYTEKDAAV-VVRQMLRVAAECHL-----HGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263
+Y +++ + V+ Q+ ECH H ++HRD+KP N +F K++ +K DFGL
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKLGDFGL 162
Query: 264 SDFIKPGKKF-QDIVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTED 321
+ + + F ++ VG+ YY++PE + R S E SD+WS+G + Y L PF ++
Sbjct: 163 ARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK 222
Query: 322 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ ++ K FRR P+ S+ + + ++L R + + L +P + E
Sbjct: 223 ELAGKIREGK--FRRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 127/263 (48%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R+ E A
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEM-----------------FSHLRRIGRFXEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 127/263 (48%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ + K
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLTK 106
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEM-----------------FSHLRRIGRFSEPHARFYAA 149
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN + + +K TDFG + +K G+ + + G+
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPE 204
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 259
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 260 SHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 134/290 (46%), Gaps = 39/290 (13%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 64
Query: 150 LQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
L+ + +G V++ + FE D++V I + +L D I +
Sbjct: 65 LKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITER---------------- 108
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
E+ A Q+L CH G++HRD+K EN L + LK DFG +
Sbjct: 109 -GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALL 165
Query: 268 KPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325
K + D G+ Y PE ++ R G + VWS+G++ Y ++CG PF D +
Sbjct: 166 K-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---E 218
Query: 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
E++R + FR++ +S+ + ++ L P R T + +HPW+++
Sbjct: 219 EIIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 127/263 (48%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ + K
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLTK 106
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEM-----------------FSHLRRIGRFSEPHARFYAA 149
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN + + +K TDFG + +K G+ + + G+
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPE 204
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 259
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 260 SHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 129/263 (49%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEM-----------------FSHLRRIGRFSEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + ++ TDFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 ALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 137/300 (45%), Gaps = 43/300 (14%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + +++G G A ++VA+K+I K +++++ +E++ + H
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK--CQTSMDELLKEIQAMSQ-CHHP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+V +Y +F + +++ M+L GG +LD I+ +++ K E A
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLD-IIKHIVAK--------GEHKSGVLDESTIA 124
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG------K 271
++R++L H +G +HRD+K N L ED S++ DFG+S F+ G K
Sbjct: 125 TILREVLEGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVSAFLATGGDITRNK 181
Query: 272 KFQDIVGSAYYVAPEVLKRKSGPE--SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329
+ VG+ ++APEV+++ G + +D+WS G+ L G P+ + L+
Sbjct: 182 VRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQ 241
Query: 330 NKPDFRRKPWPSISNSAKD-------------FVKKLLVKDPRARLTAAQALSHPWVREG 376
N P PS+ +D + L KDP R TAA+ L H + ++
Sbjct: 242 NDP-------PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 294
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 143/318 (44%), Gaps = 42/318 (13%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 5 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 64
Query: 125 AVKKIEKNKMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFEDDNYVYIAMELC 179
A+K +EK+++ LP V EV +L+ + +G V++ + FE + + +E
Sbjct: 65 AIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 123
Query: 180 EGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 239
E + L F I + E+ A Q+L CH G++HRD
Sbjct: 124 EPVQDL----------------FDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRD 167
Query: 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESD 297
+K EN L + LK DFG +K + D G+ Y PE ++ R G +
Sbjct: 168 IKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 224
Query: 298 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 357
VWS+G++ Y ++CG PF D +E++R + FR++ +S+ + ++ L
Sbjct: 225 VWSLGILLYDMVCGDIPF---EHD---EEIIRGQVFFRQR----VSSECQHLIRWCLALR 274
Query: 358 PRARLTAAQALSHPWVRE 375
P R T + +HPW+++
Sbjct: 275 PSDRPTFEEIQNHPWMQD 292
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 43/294 (14%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + +++G G A ++VA+K+I K +++++ +E++ + H
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK--CQTSMDELLKEIQAMSQ-CHHP 68
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+V +Y +F + +++ M+L GG +LD I+ +++ K E A
Sbjct: 69 NIVSYYTSFVVKDELWLVMKLLSGGSVLD-IIKHIVAK--------GEHKSGVLDESTIA 119
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG------K 271
++R++L H +G +HRD+K N L ED S++ DFG+S F+ G K
Sbjct: 120 TILREVLEGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVSAFLATGGDITRNK 176
Query: 272 KFQDIVGSAYYVAPEVLKRKSGPE--SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329
+ VG+ ++APEV+++ G + +D+WS G+ L G P+ + L+
Sbjct: 177 VRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQ 236
Query: 330 NKPDFRRKPWPSISNSAKD-------------FVKKLLVKDPRARLTAAQALSH 370
N P PS+ +D + L KDP R TAA+ L H
Sbjct: 237 NDP-------PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 283
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 142/318 (44%), Gaps = 42/318 (13%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 20 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 79
Query: 125 AVKKIEKNKMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFEDDNYVYIAMELC 179
A+K +EK+++ LP V EV +L+ + +G V++ + FE + + +E
Sbjct: 80 AIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 138
Query: 180 EGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 239
E + L F I + E+ A Q+L CH G++HRD
Sbjct: 139 EPVQDL----------------FDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRD 182
Query: 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESD 297
+K EN L + LK DFG +K + D G+ Y PE ++ R G +
Sbjct: 183 IKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 239
Query: 298 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 357
VWS+G++ Y ++CG PF +E++R + FR++ +S+ + ++ L
Sbjct: 240 VWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR----VSSECQHLIRWCLALR 289
Query: 358 PRARLTAAQALSHPWVRE 375
P R T + +HPW+++
Sbjct: 290 PSDRPTFEEIQNHPWMQD 307
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 127/263 (48%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K +G G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R++E A
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEM-----------------FSHLRRIGRFSEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + +K DFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 145/294 (49%), Gaps = 36/294 (12%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+D++ YTIG G +G K++G + K+++ M + + EV +L+
Sbjct: 6 EDYEVLYTIGT----GSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLR 60
Query: 152 ALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
L H N+V++Y+ D + +YI ME CEGG+L ++ +T K+
Sbjct: 61 ELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDL---------ASVITKG-----TKER 105
Query: 210 RYTEKDAAV-VVRQMLRVAAECHL-----HGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263
+Y +++ + V+ Q+ ECH H ++HRD+KP N +F K++ +K DFGL
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKLGDFGL 162
Query: 264 SDFIKPGKKF-QDIVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTED 321
+ + F + VG+ YY++PE + R S E SD+WS+G + Y L PF ++
Sbjct: 163 ARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK 222
Query: 322 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ ++ K FRR P+ S+ + + ++L R + + L +P + E
Sbjct: 223 ELAGKIREGK--FRRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 126/263 (47%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ + K
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLTK 106
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GGE+ F +R+ R+ E A
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEM-----------------FSHLRRIGRFXEPHARFYAA 149
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN + + +K TDFG + +K G+ + + G+
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPE 204
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 259
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 260 SHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 141/318 (44%), Gaps = 42/318 (13%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 20 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 79
Query: 125 AVKKIEKNKMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFEDDNYVYIAMELC 179
A+K +EK+++ LP V EV +L+ + +G V++ + FE + + +E
Sbjct: 80 AIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 138
Query: 180 EGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 239
E + L F I + E+ A Q+L CH G++HRD
Sbjct: 139 EPVQDL----------------FDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRD 182
Query: 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESD 297
+K EN L + LK DFG +K + D G+ Y PE ++ R G +
Sbjct: 183 IKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 239
Query: 298 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 357
VWS+G++ Y ++CG PF +E++R + FR++ +S + ++ L
Sbjct: 240 VWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR----VSXECQHLIRWCLALR 289
Query: 358 PRARLTAAQALSHPWVRE 375
P R T + +HPW+++
Sbjct: 290 PSDRPTFEEIQNHPWMQD 307
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 137/311 (44%), Gaps = 62/311 (19%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + + LG G++ + A + N ++V VK ++ P+ +KRE+KIL+ L G
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVK------ILKPVKKNKIKREIKILENLRGGP 92
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N++ + +D ++ E ++ K + TL T+ D
Sbjct: 93 NIITLADIVKDP----VSRTPALVFEHVNNTDFKQLYQTL--------------TDYDIR 134
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+++ V
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 278 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------------D 317
S Y+ PE+L + D+WS+G + ++ + PF+ +
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 318 KTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLVKDPRAR 361
D I K + P F RK W +S A DF+ KLL D ++R
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
Query: 362 LTAAQALSHPW 372
LTA +A+ HP+
Sbjct: 313 LTAREAMEHPY 323
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 145/294 (49%), Gaps = 36/294 (12%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+D++ YTIG G +G K++G + K+++ M + + EV +L+
Sbjct: 6 EDYEVLYTIGT----GSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLR 60
Query: 152 ALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
L H N+V++Y+ D + +YI ME CEGG+L ++ +T K+
Sbjct: 61 ELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDL---------ASVITKG-----TKER 105
Query: 210 RYTEKDAAV-VVRQMLRVAAECHL-----HGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263
+Y +++ + V+ Q+ ECH H ++HRD+KP N +F K++ +K DFGL
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKLGDFGL 162
Query: 264 SDFIKPGKKF-QDIVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTED 321
+ + F + VG+ YY++PE + R S E SD+WS+G + Y L PF ++
Sbjct: 163 ARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK 222
Query: 322 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ ++ K FRR P+ S+ + + ++L R + + L +P + E
Sbjct: 223 ELAGKIREGK--FRRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 141/310 (45%), Gaps = 42/310 (13%)
Query: 78 GVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKN 132
G PC + G +K+ + +Y +G LLG G FG Y ++ VA+K +EK+
Sbjct: 1 GAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 60
Query: 133 KMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDR 187
++ LP V EV +L+ + +G V++ + FE + + +E E + L
Sbjct: 61 RISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDL-- 117
Query: 188 ILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247
F I + E+ A Q+L CH G++HRD+K EN L
Sbjct: 118 --------------FDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 163
Query: 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVIT 305
+ LK DFG +K + D G+ Y PE ++ R G + VWS+G++
Sbjct: 164 DLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 220
Query: 306 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 365
Y ++CG PF D +E++R + FR++ +S+ + ++ L P R T
Sbjct: 221 YDMVCGDIPF---EHD---EEIIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFE 270
Query: 366 QALSHPWVRE 375
+ +HPW+++
Sbjct: 271 EIQNHPWMQD 280
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 141/318 (44%), Gaps = 42/318 (13%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 25 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 84
Query: 125 AVKKIEKNKMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFEDDNYVYIAMELC 179
A+K +EK+++ LP V EV +L+ + +G V++ + FE + + +E
Sbjct: 85 AIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 143
Query: 180 EGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 239
E + L F I + E+ A Q+L CH G++HRD
Sbjct: 144 EPVQDL----------------FDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRD 187
Query: 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESD 297
+K EN L + LK DFG +K + D G+ Y PE ++ R G +
Sbjct: 188 IKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 244
Query: 298 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 357
VWS+G++ Y ++CG PF +E++R + FR++ +S + ++ L
Sbjct: 245 VWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR----VSXECQHLIRWCLALR 294
Query: 358 PRARLTAAQALSHPWVRE 375
P R T + +HPW+++
Sbjct: 295 PSDRPTFEEIQNHPWMQD 312
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 37/289 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 79
Query: 150 LQAL-AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
L+ + +G V++ + FE + + +E E + L F I +
Sbjct: 80 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDL----------------FDFITER 123
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
E+ A Q+L CH G++HRD+K EN L + LK DFG +K
Sbjct: 124 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK 181
Query: 269 PGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
+ D G+ Y PE ++ R G + VWS+G++ Y ++CG PF D +E
Sbjct: 182 -DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EE 234
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
++R + FR++ +S+ + ++ L P R T + +HPW+++
Sbjct: 235 IIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 37/289 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 5 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 63
Query: 150 LQAL-AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
L+ + +G V++ + FE + + +E E + L F I +
Sbjct: 64 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDL----------------FDFITER 107
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
E+ A Q+L CH G++HRD+K EN L + LK DFG +K
Sbjct: 108 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK 165
Query: 269 PGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
+ D G+ Y PE ++ R G + VWS+G++ Y ++CG PF D +E
Sbjct: 166 -DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EE 218
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
++R + FR++ +S+ + ++ L P R T + +HPW+++
Sbjct: 219 IIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 263
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 37/289 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 65
Query: 150 LQAL-AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
L+ + +G V++ + FE + + +E E + L F I +
Sbjct: 66 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDL----------------FDFITER 109
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
E+ A Q+L CH G++HRD+K EN L + LK DFG +K
Sbjct: 110 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK 167
Query: 269 PGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
+ D G+ Y PE ++ R G + VWS+G++ Y ++CG PF D +E
Sbjct: 168 -DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EE 220
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
++R + FR++ +S+ + ++ L P R T + +HPW+++
Sbjct: 221 IIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 70
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 71 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 114
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KPEN L + + ++K DFGL+ F P + + V + +Y
Sbjct: 115 LQGLAFCHSHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 231
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 232 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 37/289 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 65
Query: 150 LQAL-AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
L+ + +G V++ + FE + + +E E + L F I +
Sbjct: 66 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDL----------------FDFITER 109
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
E+ A Q+L CH G++HRD+K EN L + LK DFG +K
Sbjct: 110 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK 167
Query: 269 PGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
+ D G+ Y PE ++ R G + VWS+G++ Y ++CG PF D +E
Sbjct: 168 -DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EE 220
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
++R + FR++ +S+ + ++ L P R T + +HPW+++
Sbjct: 221 IIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 69
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 70 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 113
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KPEN L + + ++K DFGL+ F P + + V + +Y
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 37/289 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 65
Query: 150 LQAL-AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
L+ + +G V++ + FE + + +E E + L F I +
Sbjct: 66 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDL----------------FDFITER 109
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
E+ A Q+L CH G++HRD+K EN L + LK DFG +K
Sbjct: 110 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK 167
Query: 269 PGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
+ D G+ Y PE ++ R G + VWS+G++ Y ++CG PF D +E
Sbjct: 168 -DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EE 220
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
++R + FR++ +S+ + ++ L P R T + +HPW+++
Sbjct: 221 IIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 132/289 (45%), Gaps = 37/289 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 99
Query: 150 LQAL-AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
L+ + +G V++ + FE + + +E E + L F I +
Sbjct: 100 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDL----------------FDFITER 143
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
E+ A Q+L CH G++HRD+K EN L + LK DFG +K
Sbjct: 144 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK 201
Query: 269 PGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
+ D G+ Y PE ++ R G + VWS+G++ Y ++CG PF +E
Sbjct: 202 -DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EE 254
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
++R + FR++ +S+ + ++ L P R T + +HPW+++
Sbjct: 255 IIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 299
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 134/330 (40%), Gaps = 63/330 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL A
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLA 79
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
HEN++ + E VYI +L E L K++ T
Sbjct: 80 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD------LYKLLKT------------ 120
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + Q+LR H ++HRD+KP N L + S LK DFGL+
Sbjct: 121 -QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---SDLKICDFGLARVA 176
Query: 268 KPGKK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDK--- 318
P + V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 177 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 236
Query: 319 --------------TED---GI---FKEVLRNKPDFRRKPW----PSISNSAKDFVKKLL 354
ED GI + L + P + PW P+ + A D + K+L
Sbjct: 237 DQLNHILGILGSPSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 296
Query: 355 VKDPRARLTAAQALSHPWVREGGDASEIPI 384
+P R+ QAL+HP++ + D S+ PI
Sbjct: 297 TFNPHKRIEVEQALAHPYLAQYYDPSDEPI 326
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 37/289 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 64
Query: 150 LQAL-AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
L+ + +G V++ + FE + + +E E + L F I +
Sbjct: 65 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDL----------------FDFITER 108
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
E+ A Q+L CH G++HRD+K EN L + LK DFG +K
Sbjct: 109 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK 166
Query: 269 PGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
+ D G+ Y PE ++ R G + VWS+G++ Y ++CG PF D +E
Sbjct: 167 -DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EE 219
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
++R + FR++ +S+ + ++ L P R T + +HPW+++
Sbjct: 220 IIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 140/310 (45%), Gaps = 42/310 (13%)
Query: 78 GVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKN 132
G PC + G +K+ + +Y +G LLG G FG Y ++ VA+K +EK+
Sbjct: 1 GAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 60
Query: 133 KMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDR 187
++ LP V EV +L+ + +G V++ + FE + + +E E + L
Sbjct: 61 RISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDL-- 117
Query: 188 ILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247
F I + E+ A Q+L CH G++HRD+K EN L
Sbjct: 118 --------------FDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 163
Query: 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVIT 305
+ LK DFG +K + D G+ Y PE ++ R G + VWS+G++
Sbjct: 164 DLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 220
Query: 306 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 365
Y ++CG PF D +E++R + FR++ +S + ++ L P R T
Sbjct: 221 YDMVCGDIPF---EHD---EEIIRGQVFFRQR----VSXECQHLIRWCLALRPSDRPTFE 270
Query: 366 QALSHPWVRE 375
+ +HPW+++
Sbjct: 271 EIQNHPWMQD 280
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 37/289 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 60
Query: 150 LQAL-AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
L+ + +G V++ + FE + + +E E + L F I +
Sbjct: 61 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDL----------------FDFITER 104
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
E+ A Q+L CH G++HRD+K EN L + LK DFG +K
Sbjct: 105 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK 162
Query: 269 PGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
+ D G+ Y PE ++ R G + VWS+G++ Y ++CG PF D +E
Sbjct: 163 -DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EE 215
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
++R + FR++ +S+ + ++ L P R T + +HPW+++
Sbjct: 216 IIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 121/274 (44%), Gaps = 34/274 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K++G G FG + K+ A+K + K +MI E I+ A A
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSP 129
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VV+ + AF+DD Y+Y+ ME GG+L++ + + EK A
Sbjct: 130 WVVQLFYAFQDDRYLYMVMEYMPGGDLVN------------------LMSNYDVPEKWAR 171
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK----KF 273
+++ H G +HRD+KP+N L + LK DFG +K K +
Sbjct: 172 FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS---GHLKLADFGTC--MKMNKEGMVRC 226
Query: 274 QDIVGSAYYVAPEVLKRKSGP-----ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
VG+ Y++PEVLK + G E D WS+GV Y +L G PF+ + G + +++
Sbjct: 227 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 286
Query: 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 362
+K IS AK+ + L D RL
Sbjct: 287 NHKNSLTFPDDNDISKEAKNLICAFLT-DREVRL 319
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 121/274 (44%), Gaps = 34/274 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K++G G FG + K+ A+K + K +MI E I+ A A
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSP 134
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VV+ + AF+DD Y+Y+ ME GG+L++ + + EK A
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVN------------------LMSNYDVPEKWAR 176
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK----KF 273
+++ H G +HRD+KP+N L + LK DFG +K K +
Sbjct: 177 FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS---GHLKLADFGTC--MKMNKEGMVRC 231
Query: 274 QDIVGSAYYVAPEVLKRKSGP-----ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
VG+ Y++PEVLK + G E D WS+GV Y +L G PF+ + G + +++
Sbjct: 232 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
Query: 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 362
+K IS AK+ + L D RL
Sbjct: 292 NHKNSLTFPDDNDISKEAKNLICAFLT-DREVRL 324
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 121/274 (44%), Gaps = 34/274 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K++G G FG + K+ A+K + K +MI E I+ A A
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSP 134
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VV+ + AF+DD Y+Y+ ME GG+L++ + + EK A
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVN------------------LMSNYDVPEKWAR 176
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK----KF 273
+++ H G +HRD+KP+N L + LK DFG +K K +
Sbjct: 177 FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS---GHLKLADFGTC--MKMNKEGMVRC 231
Query: 274 QDIVGSAYYVAPEVLKRKSGP-----ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
VG+ Y++PEVLK + G E D WS+GV Y +L G PF+ + G + +++
Sbjct: 232 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
Query: 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 362
+K IS AK+ + L D RL
Sbjct: 292 NHKNSLTFPDDNDISKEAKNLICAFLT-DREVRL 324
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 37/289 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 60
Query: 150 LQAL-AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
L+ + +G V++ + FE + + +E E + L F I +
Sbjct: 61 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDL----------------FDFITER 104
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
E+ A Q+L CH G++HRD+K EN L + LK DFG +K
Sbjct: 105 GALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK 162
Query: 269 PGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
+ D G+ Y PE ++ R G + VWS+G++ Y ++CG PF D +E
Sbjct: 163 -DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EE 215
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
++R + FR++ +S + ++ L P R T + +HPW+++
Sbjct: 216 IIRGQVFFRQR----VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 139/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 69
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L L K + + + L + K + Q+
Sbjct: 70 DVIHTENKLYLVFEF------LSMDLKKFMDASALTGIPLPLIKSYLF----------QL 113
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KPEN L + + ++K DFGL+ F P + + V + +Y
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 140/310 (45%), Gaps = 42/310 (13%)
Query: 78 GVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKN 132
G PC + G +K+ + +Y +G LLG G FG Y ++ VA+K +EK+
Sbjct: 1 GAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 60
Query: 133 KMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDR 187
++ LP V EV +L+ + +G V++ + FE + + +E E + L
Sbjct: 61 RISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDL-- 117
Query: 188 ILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247
F I + E+ A Q+L CH G++HRD+K EN L
Sbjct: 118 --------------FDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 163
Query: 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVIT 305
+ LK DFG +K + D G+ Y PE ++ R G + VWS+G++
Sbjct: 164 DLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 220
Query: 306 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 365
Y ++CG PF D +E++R + FR++ +S + ++ L P R T
Sbjct: 221 YDMVCGDIPF---EHD---EEIIRGQVFFRQR----VSXECQHLIRWCLALRPXDRPTFE 270
Query: 366 QALSHPWVRE 375
+ +HPW+++
Sbjct: 271 EIQNHPWMQD 280
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 69 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 112
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 283 VAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 170 RAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 37/289 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 79
Query: 150 LQAL-AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
L+ + +G V++ + FE + + +E E + L F I +
Sbjct: 80 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDL----------------FDFITER 123
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
E+ A Q+L CH G++HRD+K EN L + LK DFG +K
Sbjct: 124 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK 181
Query: 269 PGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
+ D G+ Y PE ++ R G + VWS+G++ Y ++CG PF D +E
Sbjct: 182 -DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EE 234
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
++R + FR++ +S + ++ L P R T + +HPW+++
Sbjct: 235 IIRGQVFFRQR----VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 127/263 (48%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K +G G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GG++ F +R+ R++E A
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDM-----------------FSHLRRIGRFSEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + +K DFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 139/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 71
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L L K + + + L + K + Q+
Sbjct: 72 DVIHTENKLYLVFEF------LSMDLKKFMDASALTGIPLPLIKSYLF----------QL 115
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KPEN L + + ++K DFGL+ F P + + V + +Y
Sbjct: 116 LQGLAFCHSHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 75
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 76 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 119
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 120 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWY 176
Query: 283 VAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 177 RAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 236
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 237 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 37/289 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 29 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 87
Query: 150 LQAL-AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
L+ + +G V++ + FE + + +E E + L F I +
Sbjct: 88 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDL----------------FDFITER 131
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
E+ A Q+L CH G++HRD+K EN L + LK DFG +K
Sbjct: 132 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK 189
Query: 269 PGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
+ D G+ Y PE ++ R G + VWS+G++ Y ++CG PF D +E
Sbjct: 190 -DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EE 242
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
++R + FR++ +S + ++ L P R T + +HPW+++
Sbjct: 243 IIRGQVFFRQR----VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 287
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 72
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 73 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 116
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWY 173
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 233
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 234 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 127/263 (48%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+ LG G FG + K G+ A+K ++K K++ +E E +I QA+ +VK
Sbjct: 48 RTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAV-NFPFLVK 106
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ +E GGE+ F +R+ R++E A
Sbjct: 107 LEFSFKDNSNLYMVLEYAPGGEM-----------------FSHLRRIGRFSEPHARFYAA 149
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + +K DFG + +K G+ + + G+
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPE 204
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 259
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 260 SHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 127/263 (48%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K +G G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+D++ +Y+ ME GG++ F +R+ R++E A
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDM-----------------FSHLRRIGRFSEPHARFYAA 148
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q++ H L++RD+KPEN L + +K DFG + +K G+ + + G+
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPE 203
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ K ++ D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----P 258
Query: 341 S-ISNSAKDFVKKLLVKDPRARL 362
S S+ KD ++ LL D R
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 142/318 (44%), Gaps = 42/318 (13%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 6 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 65
Query: 125 AVKKIEKNKMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFEDDNYVYIAMELC 179
A+K +EK+++ LP V EV +L+ + +G V++ + FE + + +E
Sbjct: 66 AIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 124
Query: 180 EGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 239
E + L F I + E+ A Q+L CH G++HRD
Sbjct: 125 EPVQDL----------------FDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRD 168
Query: 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESD 297
+K EN L + LK DFG +K + D G+ Y PE ++ R G +
Sbjct: 169 IKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 225
Query: 298 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 357
VWS+G++ Y ++CG PF + E+ I +V FR++ +S+ + ++ L
Sbjct: 226 VWSLGILLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR----VSSECQHLIRWCLALR 275
Query: 358 PRARLTAAQALSHPWVRE 375
P R T + +HPW+++
Sbjct: 276 PSDRPTFEEIQNHPWMQD 293
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 69
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 70 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 113
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWY 170
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 142/318 (44%), Gaps = 42/318 (13%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 6 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 65
Query: 125 AVKKIEKNKMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFEDDNYVYIAMELC 179
A+K +EK+++ LP V EV +L+ + +G V++ + FE + + +E
Sbjct: 66 AIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 124
Query: 180 EGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 239
E + L F I + E+ A Q+L CH G++HRD
Sbjct: 125 EPVQDL----------------FDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRD 168
Query: 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESD 297
+K EN L + LK DFG +K + D G+ Y PE ++ R G +
Sbjct: 169 IKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 225
Query: 298 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 357
VWS+G++ Y ++CG PF + E+ I +V FR++ +S+ + ++ L
Sbjct: 226 VWSLGILLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR----VSSECQHLIRWCLALR 275
Query: 358 PRARLTAAQALSHPWVRE 375
P R T + +HPW+++
Sbjct: 276 PSDRPTFEEIQNHPWMQD 293
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 67
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 68 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 111
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 69 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 112
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 71
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 72 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 115
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 70
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 71 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 114
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 231
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 232 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 71
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 72 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 115
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 142/318 (44%), Gaps = 42/318 (13%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 5 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 64
Query: 125 AVKKIEKNKMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFEDDNYVYIAMELC 179
A+K +EK+++ LP V EV +L+ + +G V++ + FE + + +E
Sbjct: 65 AIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 123
Query: 180 EGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 239
E + L F I + E+ A Q+L CH G++HRD
Sbjct: 124 EPVQDL----------------FDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRD 167
Query: 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESD 297
+K EN L + LK DFG +K + D G+ Y PE ++ R G +
Sbjct: 168 IKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 224
Query: 298 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 357
VWS+G++ Y ++CG PF + E+ I +V FR++ +S+ + ++ L
Sbjct: 225 VWSLGILLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR----VSSECQHLIRWCLALR 274
Query: 358 PRARLTAAQALSHPWVRE 375
P R T + +HPW+++
Sbjct: 275 PSDRPTFEEIQNHPWMQD 292
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 70
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 71 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 114
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 231
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 232 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 142/318 (44%), Gaps = 42/318 (13%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 5 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 64
Query: 125 AVKKIEKNKMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFEDDNYVYIAMELC 179
A+K +EK+++ LP V EV +L+ + +G V++ + FE + + +E
Sbjct: 65 AIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 123
Query: 180 EGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 239
E + L F I + E+ A Q+L CH G++HRD
Sbjct: 124 EPVQDL----------------FDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRD 167
Query: 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESD 297
+K EN L + LK DFG +K + D G+ Y PE ++ R G +
Sbjct: 168 IKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 224
Query: 298 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 357
VWS+G++ Y ++CG PF + E+ I +V FR++ +S+ + ++ L
Sbjct: 225 VWSLGILLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR----VSSECQHLIRWCLALR 274
Query: 358 PRARLTAAQALSHPWVRE 375
P R T + +HPW+++
Sbjct: 275 PSDRPTFEEIQNHPWMQD 292
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 69
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 70 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 113
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 69 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 112
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 69 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 112
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 67
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 68 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 111
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 67
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 68 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 111
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWY 168
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 69
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 70 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 113
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 72
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 73 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 116
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWY 173
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 233
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 234 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 69 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 112
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 141/300 (47%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 71
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E +D+ L K + + + L + K + Q+
Sbjct: 72 DVIHTENKLYLVFEH------VDQDLKKFMDASALTGIPLPLIKSYLF----------QL 115
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 69 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 112
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 75
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 76 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 119
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 120 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWY 176
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 177 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 236
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 237 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 67
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 68 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 111
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWY 168
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 69 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 112
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 141/362 (38%), Gaps = 92/362 (25%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D+ R+Y + K LG G +G + + D+ G+ VAVKKI + + RE+ IL
Sbjct: 4 DRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKI-FDAFQNSTDAQRTFREIMIL 62
Query: 151 QALAGHENVVKFYNAFEDDNY--VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
L+GHEN+V N DN VY+ + E +L I A ++
Sbjct: 63 TELSGHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRANILEPV------------ 109
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---- 264
VV Q+++V H GL+HRDMKP N L + + +K DFGLS
Sbjct: 110 ------HKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNA---ECHVKVADFGLSRSFV 160
Query: 265 ------------------DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVI 304
+F D V + +Y APE+L K D+WS+G I
Sbjct: 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCI 220
Query: 305 TYILLCGRRPF-----------------WDKTED---------GIFKEVLRNKPDFRR-- 336
+LCG+ F + ED E L+ K + R+
Sbjct: 221 LGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSN 280
Query: 337 ---------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
P + A D + KLL +P R++A AL HP+V + +E
Sbjct: 281 KRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNE 340
Query: 382 IP 383
P
Sbjct: 341 EP 342
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 122/272 (44%), Gaps = 30/272 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K++G G FG + KA+ A+K + K +MI E I+ A A
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSP 135
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VV+ + AF+DD Y+Y+ ME GG+L++ + + EK A
Sbjct: 136 WVVQLFCAFQDDKYLYMVMEYMPGGDLVN------------------LMSNYDVPEKWAK 177
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDI 276
+++ H GL+HRD+KP+N L + LK DFG + G D
Sbjct: 178 FYTAEVVLALDAIHSMGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETGMVHCDT 234
Query: 277 -VGSAYYVAPEVLKRKSGP-----ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330
VG+ Y++PEVLK + G E D WS+GV + +L G PF+ + G + +++ +
Sbjct: 235 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDH 294
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 362
K IS AK+ + L D RL
Sbjct: 295 KNSLCFPEDAEISKHAKNLICAFLT-DREVRL 325
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 134/312 (42%), Gaps = 65/312 (20%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVK--KIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
LG+G + Y +K G VA+K K++ + A+ RE+ +++ L HEN+V+
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAI----REISLMKELK-HENIVR 67
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
Y+ +N + + E +D L K + + + R E + +
Sbjct: 68 LYDVIHTENKLTLVFEF------MDNDLKKYMDSR-------TVGNTPRGLELNLVKYFQ 114
Query: 222 -QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGS 279
Q+L+ A CH + ++HRD+KP+N L + LK DFGL+ F P F V +
Sbjct: 115 WQLLQGLAFCHENKILHRDLKPQNLLI---NKRGQLKLGDFGLARAFGIPVNTFSSEVVT 171
Query: 280 AYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 337
+Y AP+VL R D+WS G I ++ G +P + T D +E L+ D
Sbjct: 172 LWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITG-KPLFPGTND---EEQLKLIFDIMGT 227
Query: 338 P----WPSISNSAK------------------------------DFVKKLLVKDPRARLT 363
P WPS++ K DF+ LL +P RL+
Sbjct: 228 PNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLS 287
Query: 364 AAQALSHPWVRE 375
A QAL HPW E
Sbjct: 288 AKQALHHPWFAE 299
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 137/321 (42%), Gaps = 68/321 (21%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKI---EKNKMILPIAVEDVKREVKILQALAGH 156
IGK+ G G +G + ++ G VA+KK E + +I IA+ RE+++L+ L H
Sbjct: 8 IGKI-GEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIAL----REIRMLKQLK-H 61
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGEL--LDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
N+V F +++ E C+ L LDR + + S
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKS--------------- 106
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKF 273
+ Q L+ CH H +HRD+KPEN L + S +K DFG + + P +
Sbjct: 107 ----ITWQTLQAVNFCHKHNCIHRDVKPENILI---TKHSVIKLCDFGFARLLTGPSDYY 159
Query: 274 QDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEV 327
D V + +Y +PE+L + GP DVW+IG + LL G P W D + ++
Sbjct: 160 DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG-VPLWPGKSDVDQLYLIRKT 218
Query: 328 L-----RNKPDFRRKPW-------------------PSISNSAKDFVKKLLVKDPRARLT 363
L R++ F + P+IS A +K L DP RLT
Sbjct: 219 LGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLT 278
Query: 364 AAQALSHPW---VREGGDASE 381
Q L HP+ +RE D ++
Sbjct: 279 CEQLLHHPYFENIREIEDLAK 299
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 141/318 (44%), Gaps = 42/318 (13%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 5 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 64
Query: 125 AVKKIEKNKMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFEDDNYVYIAMELC 179
A+K +EK+++ LP V EV +L+ + +G V++ + FE + + +E
Sbjct: 65 AIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 123
Query: 180 EGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 239
E + L F I + E+ A Q+L CH G++HRD
Sbjct: 124 EPVQDL----------------FDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRD 167
Query: 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESD 297
+K EN L + LK DFG +K + D G+ Y PE ++ R G +
Sbjct: 168 IKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 224
Query: 298 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 357
VWS+G++ Y ++CG PF + E+ I +V FR++ +S + ++ L
Sbjct: 225 VWSLGILLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR----VSXECQHLIRWCLALR 274
Query: 358 PRARLTAAQALSHPWVRE 375
P R T + +HPW+++
Sbjct: 275 PSDRPTFEEIQNHPWMQD 292
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 137/297 (46%), Gaps = 40/297 (13%)
Query: 87 DFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKRE 146
D+ YD++ DR +LG G +G Y D +N R+A+K+I + + + E
Sbjct: 18 DYEYDENGDRV-----VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS---QPLHEE 69
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
+ + + L H+N+V++ +F ++ ++ I ME GG L S L S W
Sbjct: 70 IALHKHLK-HKNIVQYLGSFSENGFIKIFMEQVPGGSL---------SALLRSKW--GPL 117
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD- 265
KD+ E+ +Q+L H + +VHRD+K +N L + LK +DFG S
Sbjct: 118 KDN---EQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTY--SGVLKISDFGTSKR 172
Query: 266 --FIKPGKKFQDIVGSAYYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPFWDKTE 320
I P + G+ Y+APE++ R G +D+WS+G + G+ PF++ E
Sbjct: 173 LAGINPCT--ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE 230
Query: 321 D--GIFK-EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
+FK + + P+ S+S AK F+ K DP R A L +++
Sbjct: 231 PQAAMFKVGMFKVHPEIPE----SMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 283
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 141/318 (44%), Gaps = 42/318 (13%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 6 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 65
Query: 125 AVKKIEKNKMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFEDDNYVYIAMELC 179
A+K +EK+++ LP V EV +L+ + +G V++ + FE + + +E
Sbjct: 66 AIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 124
Query: 180 EGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 239
E + L F I + E+ A Q+L CH G++HRD
Sbjct: 125 EPVQDL----------------FDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRD 168
Query: 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESD 297
+K EN L + LK DFG +K + D G+ Y PE ++ R G +
Sbjct: 169 IKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 225
Query: 298 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 357
VWS+G++ Y ++CG PF + E+ I +V FR++ +S + ++ L
Sbjct: 226 VWSLGILLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR----VSXECQHLIRWCLALR 275
Query: 358 PRARLTAAQALSHPWVRE 375
P R T + +HPW+++
Sbjct: 276 PSDRPTFEEIQNHPWMQD 293
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 141/318 (44%), Gaps = 42/318 (13%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 6 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 65
Query: 125 AVKKIEKNKMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFEDDNYVYIAMELC 179
A+K +EK+++ LP V EV +L+ + +G V++ + FE + + +E
Sbjct: 66 AIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 124
Query: 180 EGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 239
E + L F I + E+ A Q+L CH G++HRD
Sbjct: 125 EPVQDL----------------FDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRD 168
Query: 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESD 297
+K EN L + LK DFG +K + D G+ Y PE ++ R G +
Sbjct: 169 IKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 225
Query: 298 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 357
VWS+G++ Y ++CG PF + E+ I +V FR++ +S + ++ L
Sbjct: 226 VWSLGILLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR----VSXECQHLIRWCLALR 275
Query: 358 PRARLTAAQALSHPWVRE 375
P R T + +HPW+++
Sbjct: 276 PSDRPTFEEIQNHPWMQD 293
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 139/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L + + + L + K + Q+
Sbjct: 69 DVIHTENKLYLVFEF------LHQDLKDFMDASALTGIPLPLIKSYLF----------QL 112
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KPEN L + + ++K DFGL+ F P + + V + +Y
Sbjct: 113 LQGLAFCHSHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 137/297 (46%), Gaps = 40/297 (13%)
Query: 87 DFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKRE 146
D+ YD++ DR +LG G +G Y D +N R+A+K+I + + + E
Sbjct: 4 DYEYDENGDRV-----VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS---QPLHEE 55
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
+ + + L H+N+V++ +F ++ ++ I ME GG L S L S W
Sbjct: 56 IALHKHLK-HKNIVQYLGSFSENGFIKIFMEQVPGGSL---------SALLRSKW--GPL 103
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD- 265
KD+ E+ +Q+L H + +VHRD+K +N L + LK +DFG S
Sbjct: 104 KDN---EQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTY--SGVLKISDFGTSKR 158
Query: 266 --FIKPGKKFQDIVGSAYYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPFWDKTE 320
I P + G+ Y+APE++ R G +D+WS+G + G+ PF++ E
Sbjct: 159 LAGINPCT--ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE 216
Query: 321 D--GIFK-EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
+FK + + P+ S+S AK F+ K DP R A L +++
Sbjct: 217 PQAAMFKVGMFKVHPEIPE----SMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 269
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 69 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 112
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ + CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 113 LQGLSFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 127/270 (47%), Gaps = 35/270 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I K++G G FG V K N D+V KI +L A RE + + +
Sbjct: 76 FEILKVIGRGAFGEVAVVKLK-NADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK 134
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+ + AF+DDN +Y+ M+ GG+LL TL S + + R E+ A
Sbjct: 135 WITTLHYAFQDDNNLYLVMDYYVGGDLL----------TLLSKF------EDRLPEEMAR 178
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD-- 275
+ +M+ H VHRD+KP+N L + ++ DFG + Q
Sbjct: 179 FYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM---NGHIRLADFGSCLKLMEDGTVQSSV 235
Query: 276 IVGSAYYVAPEVL------KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329
VG+ Y++PE+L K + GPE D WS+GV Y +L G PF+ ++ + +++
Sbjct: 236 AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 295
Query: 330 NKPDFRRKPWPS----ISNSAKDFVKKLLV 355
+K F+ +P+ +S +AKD +++L+
Sbjct: 296 HKERFQ---FPTQVTDVSENAKDLIRRLIC 322
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 131/330 (39%), Gaps = 63/330 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL A
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLA 79
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
HEN++ + E VYI +L E L K++ T
Sbjct: 80 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD------LYKLLKT------------ 120
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 121 -QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVA 176
Query: 268 KPGKK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE- 320
P + V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 177 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 236
Query: 321 ------DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLL 354
GI + L + P + PW P+ + A D + K+L
Sbjct: 237 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 296
Query: 355 VKDPRARLTAAQALSHPWVREGGDASEIPI 384
+P R+ QAL+HP++ + D S+ PI
Sbjct: 297 TFNPHKRIEVEQALAHPYLAQYYDPSDEPI 326
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 132/289 (45%), Gaps = 37/289 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 60
Query: 150 LQAL-AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
L+ + +G V++ + FE + + +E E + L F I +
Sbjct: 61 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDL----------------FDFITER 104
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
E+ A Q+L CH G++HRD+K EN L + LK DFG +K
Sbjct: 105 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK 162
Query: 269 PGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
+ D G+ Y PE ++ R G + VWS+G++ Y ++CG PF D +E
Sbjct: 163 -DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EE 215
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
++ + FR++ +S+ + ++ L P R T + +HPW+++
Sbjct: 216 IIGGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+ KI + + + RE+ +L+ L H N+VK
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 69 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 112
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+ KI + + + RE+ +L+ L H N+VK
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 67
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L K + + + L + K + Q+
Sbjct: 68 DVIHTENKLYLVFEF------LHQDLKKFMDASALTGIPLPLIKSYLF----------QL 111
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 123/265 (46%), Gaps = 26/265 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K++G G FG +A KA AVK ++K ++ + + E +L H +V
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+ +F+ + +Y ++ GGEL F ++++ + E A
Sbjct: 104 LHFSFQTADKLYFVLDYINGGEL-----------------FYHLQRERCFLEPRARFYAA 146
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 280
++ H +V+RD+KPEN L S + TDFGL + I+ G+
Sbjct: 147 EIASALGYLHSLNIVYRDLKPENILLDS---QGHIVLTDFGLCKENIEHNSTTSTFCGTP 203
Query: 281 YYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339
Y+APEVL ++ + D W +G + Y +L G PF+ + ++ +L NKP + K
Sbjct: 204 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL-NKP-LQLK-- 259
Query: 340 PSISNSAKDFVKKLLVKDPRARLTA 364
P+I+NSA+ ++ LL KD RL A
Sbjct: 260 PNITNSARHLLEGLLQKDRTKRLGA 284
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 71
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L + L + + + L + K + Q+
Sbjct: 72 DVIHTENKLYLVFEF------LHQDLKTFMDASALTGIPLPLIKSYLF----------QL 115
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 138/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 70
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L L + + + L + K + Q+
Sbjct: 71 DVIHTENKLYLVFEF------LSMDLKDFMDASALTGIPLPLIKSYLF----------QL 114
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 231
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 232 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 138/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 71
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E L L + + + L + K + Q+
Sbjct: 72 DVIHTENKLYLVFEF------LSMDLKDFMDASALTGIPLPLIKSYLF----------QL 115
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 129/325 (39%), Gaps = 53/325 (16%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 97
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
HEN++ + ++++ + T L A + K +
Sbjct: 98 FR-HENIIGINDIIR--------------APTIEQMKDVYLVTHLMGADLYKLLKTQHLS 142
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 272
+ Q+LR H ++HRD+KP N L + + LK DFGL+ P
Sbjct: 143 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHD 199
Query: 273 ----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE------ 320
+ V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 200 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH 259
Query: 321 -DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPR 359
GI + L + P + PW P+ + A D + K+L +P
Sbjct: 260 ILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPH 319
Query: 360 ARLTAAQALSHPWVREGGDASEIPI 384
R+ QAL+HP++ + D S+ PI
Sbjct: 320 KRIEVEQALAHPYLEQYYDPSDEPI 344
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 131/330 (39%), Gaps = 63/330 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 77
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
HEN++ + E VYI +L E L K++ T
Sbjct: 78 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD------LYKLLKT------------ 118
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + Q+LR H ++HRD+KP N L + + LK DFGL+
Sbjct: 119 -QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVA 174
Query: 268 KPGKK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE- 320
P + V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 175 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234
Query: 321 ------DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLL 354
GI + L + P + PW P+ + A D + K+L
Sbjct: 235 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 294
Query: 355 VKDPRARLTAAQALSHPWVREGGDASEIPI 384
+P R+ QAL+HP++ + D S+ PI
Sbjct: 295 TFNPHKRIEVEQALAHPYLEQYYDPSDEPI 324
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 131/330 (39%), Gaps = 63/330 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 77
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
HEN++ + E VYI +L E L K++ T
Sbjct: 78 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD------LYKLLKT------------ 118
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + Q+LR H ++HRD+KP N L + + LK DFGL+
Sbjct: 119 -QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVA 174
Query: 268 KPGKK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE- 320
P + V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 175 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234
Query: 321 ------DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLL 354
GI + L + P + PW P+ + A D + K+L
Sbjct: 235 DQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 294
Query: 355 VKDPRARLTAAQALSHPWVREGGDASEIPI 384
+P R+ QAL+HP++ + D S+ PI
Sbjct: 295 TFNPHKRIEVEQALAHPYLEQYYDPSDEPI 324
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 130/330 (39%), Gaps = 63/330 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 28 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 85
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
HEN++ + E VYI +L E L K++ T
Sbjct: 86 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD------LYKLLKT------------ 126
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 127 -QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVA 182
Query: 268 KPGKK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE- 320
P + V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 183 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 242
Query: 321 ------DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLL 354
GI + L + P + PW P+ + A D + K+L
Sbjct: 243 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 302
Query: 355 VKDPRARLTAAQALSHPWVREGGDASEIPI 384
+P R+ QAL+HP++ + D S+ PI
Sbjct: 303 TFNPHKRIEVEQALAHPYLEQYYDPSDEPI 332
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 130/330 (39%), Gaps = 63/330 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 77
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
HEN++ + E VYI +L E L K++ T
Sbjct: 78 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD------LYKLLKT------------ 118
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 119 -QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVA 174
Query: 268 KPGKK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE- 320
P + V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 175 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234
Query: 321 ------DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLL 354
GI + L + P + PW P+ + A D + K+L
Sbjct: 235 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 294
Query: 355 VKDPRARLTAAQALSHPWVREGGDASEIPI 384
+P R+ QAL+HP++ + D S+ PI
Sbjct: 295 TFNPHKRIEVEQALAHPYLEQYYDPSDEPI 324
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 130/330 (39%), Gaps = 63/330 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 77
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
HEN++ + E VYI +L E L K++ T
Sbjct: 78 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD------LYKLLKT------------ 118
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 119 -QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVA 174
Query: 268 KPGKK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE- 320
P + V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 175 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234
Query: 321 ------DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLL 354
GI + L + P + PW P+ + A D + K+L
Sbjct: 235 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 294
Query: 355 VKDPRARLTAAQALSHPWVREGGDASEIPI 384
+P R+ QAL+HP++ + D S+ PI
Sbjct: 295 TFNPHKRIEVEQALAHPYLEQYYDPSDEPI 324
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 131/330 (39%), Gaps = 63/330 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 77
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
HEN++ + E VYI +L E L K++ T
Sbjct: 78 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD------LYKLLKT------------ 118
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + Q+LR H ++HRD+KP N L + + LK DFGL+
Sbjct: 119 -QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKIXDFGLARVA 174
Query: 268 KPGKK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE- 320
P + V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 175 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234
Query: 321 ------DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLL 354
GI + L + P + PW P+ + A D + K+L
Sbjct: 235 DQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 294
Query: 355 VKDPRARLTAAQALSHPWVREGGDASEIPI 384
+P R+ QAL+HP++ + D S+ PI
Sbjct: 295 TFNPHKRIEVEQALAHPYLEQYYDPSDEPI 324
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 130/330 (39%), Gaps = 63/330 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 79
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
HEN++ + E VYI +L E L K++ T
Sbjct: 80 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD------LYKLLKT------------ 120
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 121 -QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVA 176
Query: 268 KPGKK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE- 320
P + V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 177 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 236
Query: 321 ------DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLL 354
GI + L + P + PW P+ + A D + K+L
Sbjct: 237 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 296
Query: 355 VKDPRARLTAAQALSHPWVREGGDASEIPI 384
+P R+ QAL+HP++ + D S+ PI
Sbjct: 297 TFNPHKRIEVEQALAHPYLEQYYDPSDEPI 326
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 131/330 (39%), Gaps = 63/330 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 81
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
HEN++ + E VYI +L E L K++ T
Sbjct: 82 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD------LYKLLKT------------ 122
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + Q+LR H ++HRD+KP N L + + LK DFGL+
Sbjct: 123 -QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVA 178
Query: 268 KPGKK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE- 320
P + V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
Query: 321 ------DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLL 354
GI + L + P + PW P+ + A D + K+L
Sbjct: 239 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 298
Query: 355 VKDPRARLTAAQALSHPWVREGGDASEIPI 384
+P R+ QAL+HP++ + D S+ PI
Sbjct: 299 TFNPHKRIEVEQALAHPYLEQYYDPSDEPI 328
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 130/330 (39%), Gaps = 63/330 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 97
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
HEN++ + E VYI +L E L K++ T
Sbjct: 98 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD------LYKLLKT------------ 138
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 139 -QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVA 194
Query: 268 KPGKK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE- 320
P + V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 195 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 254
Query: 321 ------DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLL 354
GI + L + P + PW P+ + A D + K+L
Sbjct: 255 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 314
Query: 355 VKDPRARLTAAQALSHPWVREGGDASEIPI 384
+P R+ QAL+HP++ + D S+ PI
Sbjct: 315 TFNPHKRIEVEQALAHPYLEQYYDPSDEPI 344
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKSQK 121
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + EDS LK DFGL
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDSELKILDFGLCRHTD-- 176
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 297 ITAAQALAHAYFAQYHDPDDEPV 319
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 128/313 (40%), Gaps = 77/313 (24%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+G G +G Y A + G+ A+KKI EK +P RE+ IL+ L H N+VK
Sbjct: 10 IGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIP---STTIREISILKELK-HSNIVK 64
Query: 162 FYNAFEDDNYVYIAME-----------LCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
Y+ + + E +CEGG L+ + AK
Sbjct: 65 LYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSF----------------- 105
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKP 269
+ Q+L A CH ++HRD+KP+N L E LK DFGL+ F P
Sbjct: 106 ---------LLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIP 153
Query: 270 GKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327
+K+ V + +Y AP+VL +K D+WS+G I ++ G F +E +
Sbjct: 154 VRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRI 213
Query: 328 LRNKPDFRRKPWPSISN-------------------------SAKDFVKKLLVKDPRARL 362
R K WP+++ S D + K+L DP R+
Sbjct: 214 FRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRI 273
Query: 363 TAAQALSHPWVRE 375
TA QAL H + +E
Sbjct: 274 TAKQALEHAYFKE 286
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 136/323 (42%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 86
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 127
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + EDS LK DFGL+
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDSELKILDFGLARHTD-- 182
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 242
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 243 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 302
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 303 ITAAQALAHAYFAQYHDPDDEPV 325
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 130/330 (39%), Gaps = 63/330 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 81
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
HEN++ + E VYI +L E L K++ T
Sbjct: 82 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD------LYKLLKT------------ 122
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 123 -QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVA 178
Query: 268 KPGKK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE- 320
P + V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 179 DPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
Query: 321 ------DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLL 354
GI + L + P + PW P+ + A D + K+L
Sbjct: 239 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 298
Query: 355 VKDPRARLTAAQALSHPWVREGGDASEIPI 384
+P R+ QAL+HP++ + D S+ PI
Sbjct: 299 TFNPHKRIEVEQALAHPYLEQYYDPSDEPI 328
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 130/330 (39%), Gaps = 63/330 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 25 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 82
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
HEN++ + E VYI +L E L K++ T
Sbjct: 83 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD------LYKLLKT------------ 123
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 124 -QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVA 179
Query: 268 KPGKK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE- 320
P + V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 180 DPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 239
Query: 321 ------DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLL 354
GI + L + P + PW P+ + A D + K+L
Sbjct: 240 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 299
Query: 355 VKDPRARLTAAQALSHPWVREGGDASEIPI 384
+P R+ QAL+HP++ + D S+ PI
Sbjct: 300 TFNPHKRIEVEQALAHPYLEQYYDPSDEPI 329
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 130/330 (39%), Gaps = 63/330 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 18 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 75
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
HEN++ + E VYI +L E L K++ T
Sbjct: 76 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD------LYKLLKT------------ 116
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 117 -QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVA 172
Query: 268 KPGKK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE- 320
P + V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 173 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 232
Query: 321 ------DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLL 354
GI + L + P + PW P+ + A D + K+L
Sbjct: 233 DQLNHILGILGSPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 292
Query: 355 VKDPRARLTAAQALSHPWVREGGDASEIPI 384
+P R+ QAL+HP++ + D S+ PI
Sbjct: 293 TFNPHKRIEVEQALAHPYLEQYYDPSDEPI 322
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 130/330 (39%), Gaps = 63/330 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 18 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 75
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
HEN++ + E VYI +L E L K++ T
Sbjct: 76 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD------LYKLLKT------------ 116
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 117 -QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVA 172
Query: 268 KPGKK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE- 320
P + V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 173 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 232
Query: 321 ------DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLL 354
GI + L + P + PW P+ + A D + K+L
Sbjct: 233 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 292
Query: 355 VKDPRARLTAAQALSHPWVREGGDASEIPI 384
+P R+ QAL+HP++ + D S+ PI
Sbjct: 293 TFNPHKRIEVEQALAHPYLEQYYDPSDEPI 322
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 130/330 (39%), Gaps = 63/330 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 25 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 82
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
HEN++ + E VYI +L E L K++ T
Sbjct: 83 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD------LYKLLKT------------ 123
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 124 -QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVA 179
Query: 268 KPGKK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE- 320
P + V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 180 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 239
Query: 321 ------DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLL 354
GI + L + P + PW P+ + A D + K+L
Sbjct: 240 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 299
Query: 355 VKDPRARLTAAQALSHPWVREGGDASEIPI 384
+P R+ QAL+HP++ + D S+ PI
Sbjct: 300 TFNPHKRIEVEQALAHPYLEQYYDPSDEPI 329
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 130/330 (39%), Gaps = 63/330 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 26 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 83
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
HEN++ + E VYI +L E L K++ T
Sbjct: 84 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD------LYKLLKT------------ 124
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 125 -QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVA 180
Query: 268 KPGKK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE- 320
P + V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 181 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 240
Query: 321 ------DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLL 354
GI + L + P + PW P+ + A D + K+L
Sbjct: 241 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 300
Query: 355 VKDPRARLTAAQALSHPWVREGGDASEIPI 384
+P R+ QAL+HP++ + D S+ PI
Sbjct: 301 TFNPHKRIEVEQALAHPYLEQYYDPSDEPI 330
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 130/330 (39%), Gaps = 63/330 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 17 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 74
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
HEN++ + E VYI +L E L K++ T
Sbjct: 75 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD------LYKLLKT------------ 115
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 116 -QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVA 171
Query: 268 KPGKK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE- 320
P + V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 172 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 231
Query: 321 ------DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLL 354
GI + L + P + PW P+ + A D + K+L
Sbjct: 232 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 291
Query: 355 VKDPRARLTAAQALSHPWVREGGDASEIPI 384
+P R+ QAL+HP++ + D S+ PI
Sbjct: 292 TFNPHKRIEVEQALAHPYLEQYYDPSDEPI 321
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 130/330 (39%), Gaps = 63/330 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 81
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
HEN++ + E VYI +L E L K++ T
Sbjct: 82 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD------LYKLLKT------------ 122
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 123 -QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVA 178
Query: 268 KPGKK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE- 320
P + V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
Query: 321 ------DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLL 354
GI + L + P + PW P+ + A D + K+L
Sbjct: 239 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 298
Query: 355 VKDPRARLTAAQALSHPWVREGGDASEIPI 384
+P R+ QAL+HP++ + D S+ PI
Sbjct: 299 TFNPHKRIEVEQALAHPYLEQYYDPSDEPI 328
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 131/330 (39%), Gaps = 63/330 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYXQRTLREIKILLR 81
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
HEN++ + E VYI +L E L K++ T
Sbjct: 82 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD------LYKLLKT------------ 122
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + Q+LR H ++HRD+KP N L + + LK DFGL+
Sbjct: 123 -QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVA 178
Query: 268 KPGKK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE- 320
P + V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
Query: 321 ------DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLL 354
GI + L + P + PW P+ + A D + K+L
Sbjct: 239 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 298
Query: 355 VKDPRARLTAAQALSHPWVREGGDASEIPI 384
+P R+ QAL+HP++ + D S+ PI
Sbjct: 299 TFNPHKRIEVEQALAHPYLEQYYDPSDEPI 328
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 128/313 (40%), Gaps = 77/313 (24%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+G G +G Y A + G+ A+KKI EK +P RE+ IL+ L H N+VK
Sbjct: 10 IGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIP---STTIREISILKELK-HSNIVK 64
Query: 162 FYNAFEDDNYVYIAME-----------LCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
Y+ + + E +CEGG L+ + AK
Sbjct: 65 LYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSF----------------- 105
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKP 269
+ Q+L A CH ++HRD+KP+N L E LK DFGL+ F P
Sbjct: 106 ---------LLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIP 153
Query: 270 GKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327
+K+ V + +Y AP+VL +K D+WS+G I ++ G F +E +
Sbjct: 154 VRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRI 213
Query: 328 LRNKPDFRRKPWPSISN-------------------------SAKDFVKKLLVKDPRARL 362
R K WP+++ S D + K+L DP R+
Sbjct: 214 FRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRI 273
Query: 363 TAAQALSHPWVRE 375
TA QAL H + +E
Sbjct: 274 TAKQALEHAYFKE 286
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 127/311 (40%), Gaps = 73/311 (23%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A + G+ A+KKI K I + RE+ IL+ L H N+VK Y
Sbjct: 10 IGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTI-REISILKELK-HSNIVKLY 66
Query: 164 NAFEDDNYVYIAME-----------LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
+ + + E +CEGG L+ + AK
Sbjct: 67 DVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSF------------------- 105
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGK 271
+ Q+L A CH ++HRD+KP+N L E LK DFGL+ F P +
Sbjct: 106 -------LLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVR 155
Query: 272 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329
K+ + + +Y AP+VL +K D+WS+G I ++ G F +E + R
Sbjct: 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR 215
Query: 330 NKPDFRRKPWPSISN-------------------------SAKDFVKKLLVKDPRARLTA 364
K WP+++ S D + K+L DP R+TA
Sbjct: 216 ILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITA 275
Query: 365 AQALSHPWVRE 375
QAL H + +E
Sbjct: 276 KQALEHAYFKE 286
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 136/323 (42%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 82
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 123
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + EDS LK DFGL+
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDSELKILDFGLARHTD-- 178
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 238
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 239 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 298
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 299 ITAAQALAHAYFAQYHDPDDEPV 321
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 67
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +N +Y+ E + + M ++ LT I+ + Q+
Sbjct: 68 DVIHTENKLYLVFE-----HVHQDLKTFMDASALTGIPLPLIKS-----------YLFQL 111
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
Query: 283 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV--- 327
APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 328 -LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + PD++ K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 138/320 (43%), Gaps = 57/320 (17%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RY K LG G G + A D RVA+KKI P +V+ RE+KI++
Sbjct: 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD---PQSVKHALREIKIIRR 64
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI--LAKMISTTLTSAWF---LA-IR 206
L H+N+VK + G +L D + L ++ S + + LA +
Sbjct: 65 L-DHDNIVKVFEILGP-----------SGSQLTDDVGSLTELNSVYIVQEYMETDLANVL 112
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ E+ A + + Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 113 EQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT--EDLVLKIGDFGLARI 170
Query: 267 IKP-----GKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKT 319
+ P G + +V + +Y +P +L + D+W+ G I +L G+ F
Sbjct: 171 MDPHYSHKGHLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH 229
Query: 320 EDGIFKEVLRNKPDFR----------------------RKP----WPSISNSAKDFVKKL 353
E + +L + P KP P IS A DF++++
Sbjct: 230 ELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQI 289
Query: 354 LVKDPRARLTAAQALSHPWV 373
L P RLTA +ALSHP++
Sbjct: 290 LTFSPMDRLTAEEALSHPYM 309
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 86
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 127
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 182
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 242
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 243 RLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 302
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 303 ITAAQALAHAYFAQYHDPDDEPV 325
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 136/324 (41%), Gaps = 62/324 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
+ + Y +G G +G A DK +G++VA+KK+ + I + RE+ +L+
Sbjct: 21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSR-PFQSEIFAKRAYRELLLLKH 79
Query: 153 LAGHENVVKFYNAFEDDNYV------YIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
+ HENV+ + F + + Y+ M + L +I+
Sbjct: 80 MQ-HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMG---------------- 120
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+++E+ +V QML+ H G+VHRD+KP N + ED LK DFGL+
Sbjct: 121 --LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNL---AVNEDCELKILDFGLAR- 174
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRR----------- 313
+ V + +Y APEV+ D+WS+G I +L G+
Sbjct: 175 -HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQL 233
Query: 314 ------------PFWDKTEDGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 357
F K D K +++ P RK + P S A D ++K+L D
Sbjct: 234 TQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELD 293
Query: 358 PRARLTAAQALSHPWVREGGDASE 381
RLTAAQAL+HP+ D E
Sbjct: 294 VDKRLTAAQALTHPFFEPFRDPEE 317
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 121
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 176
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 177 DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 297 ITAAQALAHAYFAQYHDPDDEPV 319
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 122/265 (46%), Gaps = 26/265 (9%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
+LG G FG +A K + A+K ++K+ +I VE E ++L L + +
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
++ F+ + +Y ME GG+L+ I++ ++ E A +
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDLM-----------------YHIQQVGKFKEPQAVFYAAE 128
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAY 281
+ H G+++RD+K +N + S + +K DFG+ + + G ++ G+
Sbjct: 129 ISIGLFFLHKRGIIYRDLKLDNVMLDS---EGHIKIADFGMCKEHMMDGVTTREFCGTPD 185
Query: 282 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ + G D W+ GV+ Y +L G+ PF + ED +F+ ++ + + +
Sbjct: 186 YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK---- 241
Query: 341 SISNSAKDFVKKLLVKDPRARLTAA 365
S+S A K L+ K P RL
Sbjct: 242 SLSKEAVSICKGLMTKHPAKRLGCG 266
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ K + I + RE+++L+ + H
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSI-IHAKRTYRELRLLKHMK-H 92
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 133
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD-- 188
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 189 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 248
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 249 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 308
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 309 ITAAQALAHAYFAQYHDPDDEPV 331
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 121
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 176
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 177 DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 297 ITAAQALAHAYFAQYHDPDDEPV 319
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 130/330 (39%), Gaps = 63/330 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA++KI + + RE+KIL
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEH--QTYCQRTLREIKILLR 81
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
HEN++ + E VYI +L E L K++ T
Sbjct: 82 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD------LYKLLKT------------ 122
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 123 -QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVA 178
Query: 268 KPGKK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE- 320
P + V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
Query: 321 ------DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLL 354
GI + L + P + PW P+ + A D + K+L
Sbjct: 239 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 298
Query: 355 VKDPRARLTAAQALSHPWVREGGDASEIPI 384
+P R+ QAL+HP++ + D S+ PI
Sbjct: 299 TFNPHKRIEVEQALAHPYLEQYYDPSDEPI 328
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 127/281 (45%), Gaps = 25/281 (8%)
Query: 85 RTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK 144
R D GY+ + R I K +G GQF Y A +G VA+KK++ ++ A D
Sbjct: 23 RPDMGYNTLANFR--IEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCI 80
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
+E+ +L+ L H NV+K+Y +F +DN + I +EL + G+ L++MI +
Sbjct: 81 KEIDLLKQL-NHPNVIKYYASFIEDNELNIVLELADAGD-----LSRMIKHFKKQKRLIP 134
Query: 205 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
R +Y Q+ H ++HRD+KP N + +K D GL
Sbjct: 135 ERTVWKY--------FVQLCSALEHMHSRRVMHRDIKPANVFITAT---GVVKLGDLGLG 183
Query: 265 DFIKP-GKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTED- 321
F +VG+ YY++PE + + +SD+WS+G + Y + + PF+ +
Sbjct: 184 RFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL 243
Query: 322 -GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 361
+ K++ + D+ P S + V + DP R
Sbjct: 244 YSLCKKI--EQCDYPPLPSDHYSEELRQLVNMCINPDPEKR 282
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 127/274 (46%), Gaps = 35/274 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I K++G G FG V K N +R+ KI +L A RE + + +
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMK-NTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 150
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+ + AF+D+N++Y+ M+ GG+LL TL S + + + E A
Sbjct: 151 WITALHYAFQDENHLYLVMDYYVGGDLL----------TLLSKF------EDKLPEDMAR 194
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD-- 275
+ +M+ H VHRD+KP+N L + ++ DFG + Q
Sbjct: 195 FYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDV---NGHIRLADFGSCLKMNDDGTVQSSV 251
Query: 276 IVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329
VG+ Y++PE+L+ K GPE D WS+GV Y +L G PF+ ++ + +++
Sbjct: 252 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 311
Query: 330 NKPDFRRKPWPS----ISNSAKDFVKKLLVKDPR 359
++ F+ +PS +S AKD +++L+ R
Sbjct: 312 HEERFQ---FPSHVTDVSEEAKDLIQRLICSRER 342
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 127/274 (46%), Gaps = 35/274 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I K++G G FG V K N +R+ KI +L A RE + + +
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMK-NTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 134
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+ + AF+D+N++Y+ M+ GG+LL TL S + + + E A
Sbjct: 135 WITALHYAFQDENHLYLVMDYYVGGDLL----------TLLSKF------EDKLPEDMAR 178
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD-- 275
+ +M+ H VHRD+KP+N L + ++ DFG + Q
Sbjct: 179 FYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDV---NGHIRLADFGSCLKMNDDGTVQSSV 235
Query: 276 IVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329
VG+ Y++PE+L+ K GPE D WS+GV Y +L G PF+ ++ + +++
Sbjct: 236 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 295
Query: 330 NKPDFRRKPWPS----ISNSAKDFVKKLLVKDPR 359
++ F+ +PS +S AKD +++L+ R
Sbjct: 296 HEERFQ---FPSHVTDVSEEAKDLIQRLICSRER 326
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 86
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 127
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 182
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 242
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 243 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 302
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 303 ITAAQALAHAYFAQYHDPDDEPV 325
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 130/330 (39%), Gaps = 63/330 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 81
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
HEN++ + E VYI +L E L K++ K
Sbjct: 82 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD------LYKLL-------------K 121
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 122 CQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVA 178
Query: 268 KPGKK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTE- 320
P + V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
Query: 321 ------DGIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLL 354
GI + L + P + PW P+ + A D + K+L
Sbjct: 239 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 298
Query: 355 VKDPRARLTAAQALSHPWVREGGDASEIPI 384
+P R+ QAL+HP++ + D S+ PI
Sbjct: 299 TFNPHKRIEVEQALAHPYLEQYYDPSDEPI 328
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 121
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 176
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 297 ITAAQALAHAYFAQYHDPDDEPV 319
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 141/335 (42%), Gaps = 78/335 (23%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK---NKMILPIAVEDVKREVKILQA 152
+RY K +G G G A D G VAVKK+ + N+ + RE+ +L+
Sbjct: 22 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQT----HAKRAYRELVLLKC 77
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
+ H+N++ N F E+ VY+ MEL +D L ++I L
Sbjct: 78 V-NHKNIISLLNVFTPQKTLEEFQDVYLVMEL------MDANLCQVIHMELD-------- 122
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 123 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLART 173
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WD 317
V + YY APEV+ E+ D+WS+G I L+ G F W+
Sbjct: 174 ASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWN 233
Query: 318 KTEDGI----------FKEVLRNKPDFRRKPWPSI---------------------SNSA 346
K + + + +RN + R +P I ++ A
Sbjct: 234 KVIEQLGTPSAEFMAALQPTVRNYVE-NRPAYPGIAFEELFPDWIFPSESERDKIKTSQA 292
Query: 347 KDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
+D + K+LV DP R++ +AL HP++ D +E
Sbjct: 293 RDLLSKMLVIDPDKRISVDEALRHPYITVWYDPAE 327
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 138/292 (47%), Gaps = 41/292 (14%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K+LG+G G T V G VAVK++ + IA+ E+K+L H NV++
Sbjct: 39 KILGYGSSG-TVVFQGSFQGRPVAVKRMLID--FCDIAL----MEIKLLTESDDHPNVIR 91
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+Y + D ++YIA+ELC L ++ + S L ++K E + ++R
Sbjct: 92 YYCSETTDRFLYIALELCNLN------LQDLVESKNVSDENLKLQK-----EYNPISLLR 140
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLF----------KSAKEDSSLKATDFGLSDFIKPGK 271
Q+ A H ++HRD+KP+N L ++ E+ + +DFGL + G+
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 272 -----KFQDIVGSAYYVAPEVL----KRKSGPESDVWSIG-VITYILLCGRRPFWDKT-- 319
+ G++ + APE+L KR+ D++S+G V YIL G+ PF DK
Sbjct: 201 XXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 260
Query: 320 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 371
E I + + + + + S+ A D + +++ DP R TA + L HP
Sbjct: 261 ESNIIRGIF-SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 138/292 (47%), Gaps = 41/292 (14%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K+LG+G G T V G VAVK++ + IA+ E+K+L H NV++
Sbjct: 39 KILGYGSSG-TVVFQGSFQGRPVAVKRMLID--FCDIAL----MEIKLLTESDDHPNVIR 91
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+Y + D ++YIA+ELC L ++ + S L ++K E + ++R
Sbjct: 92 YYCSETTDRFLYIALELCNLN------LQDLVESKNVSDENLKLQK-----EYNPISLLR 140
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLF----------KSAKEDSSLKATDFGLSDFIKPGK 271
Q+ A H ++HRD+KP+N L ++ E+ + +DFGL + G+
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 272 -----KFQDIVGSAYYVAPEVL----KRKSGPESDVWSIG-VITYILLCGRRPFWDKT-- 319
+ G++ + APE+L KR+ D++S+G V YIL G+ PF DK
Sbjct: 201 XXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 260
Query: 320 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 371
E I + + + + + S+ A D + +++ DP R TA + L HP
Sbjct: 261 ESNIIRGIF-SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 76
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 117
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 172
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 173 DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 232
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 233 RLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 292
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 293 ITAAQALAHAYFAQYHDPDDEPV 315
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 136/323 (42%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 76
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K ++
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCAK 117
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 172
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 232
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 233 RLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 292
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 293 ITAAQALAHAYFAQYHDPDDEPV 315
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 135/324 (41%), Gaps = 62/324 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
+ + Y +G G +G A DK +G++VA+KK+ + I + RE+ +L+
Sbjct: 39 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSR-PFQSEIFAKRAYRELLLLKH 97
Query: 153 LAGHENVVKFYNAFEDDNYV------YIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
+ HENV+ + F + + Y+ M + L +I+
Sbjct: 98 MQ-HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMG---------------- 138
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
++E+ +V QML+ H G+VHRD+KP N + ED LK DFGL+
Sbjct: 139 --MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNL---AVNEDCELKILDFGLAR- 192
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRR----------- 313
+ V + +Y APEV+ D+WS+G I +L G+
Sbjct: 193 -HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQL 251
Query: 314 ------------PFWDKTEDGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 357
F K D K +++ P RK + P S A D ++K+L D
Sbjct: 252 TQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELD 311
Query: 358 PRARLTAAQALSHPWVREGGDASE 381
RLTAAQAL+HP+ D E
Sbjct: 312 VDKRLTAAQALTHPFFEPFRDPEE 335
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKXQK 121
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 176
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 297 ITAAQALAHAYFAQYHDPDDEPV 319
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 121
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 176
Query: 271 KKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 177 DEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 297 ITAAQALAHAYFAQYHDPDDEPV 319
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKXQK 121
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDXELKILDFGLAR--HTD 176
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 297 ITAAQALAHAYFAQYHDPDDEPV 319
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 76
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 117
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 172
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 232
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 233 RLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 292
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 293 ITAAQALAHAYFAQYHDPDDEPV 315
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 90
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 91 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 131
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 132 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 186
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 187 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 246
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 247 RLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 306
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 307 ITAAQALAHAYFAQYHDPDDEPV 329
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 86
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 127
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 182
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 242
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 243 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 302
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 303 ITAAQALAHAYFAQYHDPDDEPV 325
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 141/338 (41%), Gaps = 84/338 (24%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
+ H+N++ N F E+ VYI MEL +D L+++I L
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL------MDANLSQVIQMELD-------- 124
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D++LK DFGL+
Sbjct: 125 ------HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLART 175
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WD 317
V + YY APEV+ E+ D+WS+GVI ++ G F W+
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWN 235
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSI----------------------------------S 343
K + +++ P+F +K P++ +
Sbjct: 236 K----VIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 291
Query: 344 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
+ A+D + K+LV D R++ +AL HP++ D SE
Sbjct: 292 SQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 103
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 144
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 145 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD-- 199
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 200 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 259
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 260 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 319
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 320 ITAAQALAHAYFAQYHDPDDEPV 342
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 137/339 (40%), Gaps = 84/339 (24%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 116
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VY+ MEL +D L ++I L
Sbjct: 117 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL------MDANLCQVIQMELD-------- 162
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 163 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLART 213
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WD 317
V + YY APEV+ E+ D+WS+G I IL GR W+
Sbjct: 214 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 273
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSISN--------------------------------- 344
K + +++ P+F +K P++ N
Sbjct: 274 K----VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA 329
Query: 345 -SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
A+D + K+LV DP R++ AL HP++ D +E+
Sbjct: 330 SQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEV 368
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 91
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 132
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 133 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD-- 187
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 188 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 247
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 248 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 307
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 308 ITAAQALAHAYFAQYHDPDDEPV 330
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 103
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 144
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 145 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 199
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 200 DEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 259
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 260 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 319
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 320 ITAAQALAHAYFAQYHDPDDEPV 342
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 82
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 123
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 178
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 238
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 239 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 298
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 299 ITAAQALAHAYFAQYHDPDDEPV 321
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 121
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 176
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 177 DEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 297 ITAAQALAHAYFAQYHDPDDEPV 319
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 121
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 176
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 297 ITAAQALAHAYFAQYHDPDDEPV 319
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 121
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 176
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 297 ITAAQALAHAYFAQYHDPDDEPV 319
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 137/339 (40%), Gaps = 84/339 (24%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VY+ MEL +D L ++I L
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL------MDANLCQVIQMELD-------- 124
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLART 175
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WD 317
V + YY APEV+ E+ D+WS+G I IL GR W+
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 235
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSISN--------------------------------- 344
K + +++ P+F +K P++ N
Sbjct: 236 K----VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA 291
Query: 345 -SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
A+D + K+LV DP R++ AL HP++ D +E+
Sbjct: 292 SQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEV 330
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 92
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 133
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD-- 188
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 189 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 248
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 249 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 308
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 309 ITAAQALAHAYFAQYHDPDDEPV 331
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 92
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 133
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD-- 188
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 189 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 248
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 249 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 308
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 309 ITAAQALAHAYFAQYHDPDDEPV 331
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 121
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 176
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 297 ITAAQALAHAYFAQYHDPDDEPV 319
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 121
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 176
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 297 ITAAQALAHAYFAQYHDPDDEPV 319
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 121
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 176
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 297 ITAAQALAHAYFAQYHDPDDEPV 319
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 85
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 126
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 181
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 182 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 241
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 242 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 301
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 302 ITAAQALAHAYFAQYHDPDDEPV 324
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 121
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD-- 176
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 297 ITAAQALAHAYFAQYHDPDDEPV 319
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 137/339 (40%), Gaps = 84/339 (24%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 23 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 77
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VY+ MEL +D L ++I L
Sbjct: 78 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL------MDANLCQVIQMELD-------- 123
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 124 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLART 174
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WD 317
V + YY APEV+ E+ D+WS+G I IL GR W+
Sbjct: 175 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 234
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSISN--------------------------------- 344
K + +++ P+F +K P++ N
Sbjct: 235 K----VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA 290
Query: 345 -SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
A+D + K+LV DP R++ AL HP++ D +E+
Sbjct: 291 SQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEV 329
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 137/339 (40%), Gaps = 84/339 (24%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VY+ MEL +D L ++I L
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL------MDANLCQVIQMELD-------- 124
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLART 175
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WD 317
V + YY APEV+ E+ D+WS+G I IL GR W+
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 235
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSISN--------------------------------- 344
K + +++ P+F +K P++ N
Sbjct: 236 K----VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA 291
Query: 345 -SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
A+D + K+LV DP R++ AL HP++ D +E+
Sbjct: 292 SQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEV 330
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 137/339 (40%), Gaps = 84/339 (24%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 72
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VY+ MEL +D L ++I L
Sbjct: 73 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL------MDANLCQVIQMELD-------- 118
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 119 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLART 169
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WD 317
V + YY APEV+ E+ D+WS+G I IL GR W+
Sbjct: 170 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 229
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSISN--------------------------------- 344
K + +++ P+F +K P++ N
Sbjct: 230 K----VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA 285
Query: 345 -SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
A+D + K+LV DP R++ AL HP++ D +E+
Sbjct: 286 SQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEV 324
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 91
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 132
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 133 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDXELKILDFGLARHTD-- 187
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 188 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 247
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 248 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 307
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 308 ITAAQALAHAYFAQYHDPDDEPV 330
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 137/339 (40%), Gaps = 84/339 (24%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 72
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VY+ MEL +D L ++I L
Sbjct: 73 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL------MDANLCQVIQMELD-------- 118
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 119 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLART 169
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WD 317
V + YY APEV+ E+ D+WS+G I IL GR W+
Sbjct: 170 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 229
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSISN--------------------------------- 344
K + +++ P+F +K P++ N
Sbjct: 230 K----VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA 285
Query: 345 -SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
A+D + K+LV DP R++ AL HP++ D +E+
Sbjct: 286 SQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEV 324
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 137/335 (40%), Gaps = 76/335 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 79
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VY+ MEL +D L ++I L
Sbjct: 80 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL------MDANLCQVIQMELD-------- 125
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 126 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLART 176
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WD 317
V + YY APEV+ E+ D+WS+G I IL GR W+
Sbjct: 177 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 236
Query: 318 KTEDGI--------------FKEVLRNKPDFRRKPWPSI----------------SNSAK 347
K + + + + N+P + +P + ++ A+
Sbjct: 237 KVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR 296
Query: 348 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
D + K+LV DP R++ AL HP++ D +E+
Sbjct: 297 DLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEV 331
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 82
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 123
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD-- 178
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 238
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 239 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 298
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 299 ITAAQALAHAYFAQYHDPDDEPV 321
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 79
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 80 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 120
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 121 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 175
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 176 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 235
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 236 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 295
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 296 ITAAQALAHAYFAQYHDPDDEPV 318
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 137/339 (40%), Gaps = 84/339 (24%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 79
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VY+ MEL +D L ++I L
Sbjct: 80 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL------MDANLCQVIQMELD-------- 125
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 126 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLART 176
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WD 317
V + YY APEV+ E+ D+WS+G I IL GR W+
Sbjct: 177 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 236
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSISN--------------------------------- 344
K + +++ P+F +K P++ N
Sbjct: 237 K----VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA 292
Query: 345 -SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
A+D + K+LV DP R++ AL HP++ D +E+
Sbjct: 293 SQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEV 331
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 121
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 176
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 297 ITAAQALAHAYFAQYHDPDDEPV 319
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 137/335 (40%), Gaps = 76/335 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 71
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VY+ MEL +D L ++I L
Sbjct: 72 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL------MDANLCQVIQMELD-------- 117
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 118 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLART 168
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WD 317
V + YY APEV+ E+ D+WS+G I IL GR W+
Sbjct: 169 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 228
Query: 318 KTEDGI--------------FKEVLRNKPDFRRKPWPSI----------------SNSAK 347
K + + + + N+P + +P + ++ A+
Sbjct: 229 KVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR 288
Query: 348 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
D + K+LV DP R++ AL HP++ D +E+
Sbjct: 289 DLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEV 323
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 77
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 118
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 119 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 173
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 174 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 233
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 234 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 293
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 294 ITAAQALAHAYFAQYHDPDDEPV 316
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 139/327 (42%), Gaps = 61/327 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 13 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 65
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
I++ L H N+V+ FY++ E + VY+ + L E + R+
Sbjct: 66 IMRKL-DHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRV---------------- 108
Query: 205 IRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
R SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK D
Sbjct: 109 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCD 166
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDK 318
FG + + G+ + S YY APE++ + S DVWS G + LL G+ F
Sbjct: 167 FGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
Query: 319 TEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKL 353
+ E+++ P + PW P A +L
Sbjct: 227 SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRL 286
Query: 354 LVKDPRARLTAAQALSHPWVREGGDAS 380
L P ARLT +A +H + E D +
Sbjct: 287 LEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 137/339 (40%), Gaps = 84/339 (24%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 116
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VY+ MEL +D L ++I L
Sbjct: 117 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL------MDANLCQVIQMELD-------- 162
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 163 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLART 213
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WD 317
V + YY APEV+ E+ D+WS+G I IL GR W+
Sbjct: 214 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 273
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSISN--------------------------------- 344
K + +++ P+F +K P++ N
Sbjct: 274 K----VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA 329
Query: 345 -SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
A+D + K+LV DP R++ AL HP++ D +E+
Sbjct: 330 SQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEV 368
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 141/338 (41%), Gaps = 84/338 (24%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
+ H+N++ N F E+ VYI MEL +D L+++I L
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL------MDANLSQVIQMELD-------- 124
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D++LK DFGL+
Sbjct: 125 ------HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLART 175
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WD 317
V + YY APEV+ E+ D+WS+GVI ++ G F W+
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWN 235
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSI----------------------------------S 343
K + +++ P+F +K P++ +
Sbjct: 236 K----VIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 291
Query: 344 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
+ A+D + K+LV D R++ +AL HP++ D SE
Sbjct: 292 SQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 139/336 (41%), Gaps = 80/336 (23%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA----VEDVKREVKILQ 151
+RY K +G G G A D G VAVKK+ + P + RE+ +L+
Sbjct: 24 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSR-----PFQNQTHAKRAYRELVLLK 78
Query: 152 ALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAI 205
+ H+N++ N F E+ VY+ MEL +D L ++I L
Sbjct: 79 CV-NHKNIISLLNVFTPQKTLEEFQDVYLVMEL------MDANLCQVIHMELD------- 124
Query: 206 RKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 265
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 -------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLAR 174
Query: 266 FIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF--------W 316
V + YY APEV L D+WS+G I L+ G F W
Sbjct: 175 TACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQW 234
Query: 317 DKTEDGI----------FKEVLRNKPDFRRKPWPSI---------------------SNS 345
+K + + + +RN + R K +P I ++
Sbjct: 235 NKVIEQLGTPSAEFMAALQPTVRNYVENRPK-YPGIKFEELFPDWIFPSESERDKIKTSQ 293
Query: 346 AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
A+D + K+LV DP R++ +AL HP++ D +E
Sbjct: 294 ARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPAE 329
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 82
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 123
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD-- 178
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 238
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 239 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 298
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 299 ITAAQALAHAYFAQYHDPDDEPV 321
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 137/322 (42%), Gaps = 61/322 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 47 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 99
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
I++ L H N+V+ FY++ E + VY+ + L E + R+
Sbjct: 100 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV---------------- 142
Query: 205 IRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
R SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK D
Sbjct: 143 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCD 200
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDK 318
FG + + G+ + S YY APE++ + S DVWS G + LL G+ F
Sbjct: 201 FGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 260
Query: 319 TEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKL 353
+ E+++ P + PW P A +L
Sbjct: 261 SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRL 320
Query: 354 LVKDPRARLTAAQALSHPWVRE 375
L P ARLT +A +H + E
Sbjct: 321 LEYTPTARLTPLEACAHSFFDE 342
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 137/322 (42%), Gaps = 61/322 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 92 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 144
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
I++ L H N+V+ FY++ E + VY+ + L E + R+
Sbjct: 145 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV---------------- 187
Query: 205 IRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
R SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK D
Sbjct: 188 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCD 245
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDK 318
FG + + G+ + S YY APE++ + S DVWS G + LL G+ F
Sbjct: 246 FGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 305
Query: 319 TEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKL 353
+ E+++ P + PW P A +L
Sbjct: 306 SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRL 365
Query: 354 LVKDPRARLTAAQALSHPWVRE 375
L P ARLT +A +H + E
Sbjct: 366 LEYTPTARLTPLEACAHSFFDE 387
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 137/322 (42%), Gaps = 61/322 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 47 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 99
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
I++ L H N+V+ FY++ E + VY+ + L E + R+
Sbjct: 100 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV---------------- 142
Query: 205 IRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
R SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK D
Sbjct: 143 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCD 200
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDK 318
FG + + G+ + S YY APE++ + S DVWS G + LL G+ F
Sbjct: 201 FGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 260
Query: 319 TEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKL 353
+ E+++ P + PW P A +L
Sbjct: 261 SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRL 320
Query: 354 LVKDPRARLTAAQALSHPWVRE 375
L P ARLT +A +H + E
Sbjct: 321 LEYTPTARLTPLEACAHSFFDE 342
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 76
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 117
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 172
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 232
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 233 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 292
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 293 ITAAQALAHAYFAQYHDPDDEPV 315
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 137/335 (40%), Gaps = 76/335 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 71
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VY+ MEL +D L ++I L
Sbjct: 72 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL------MDANLXQVIQMELD-------- 117
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 118 ------HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLART 168
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WD 317
V + YY APEV+ E+ D+WS+G I IL GR W+
Sbjct: 169 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 228
Query: 318 KTEDGI--------------FKEVLRNKPDFRRKPWPSI----------------SNSAK 347
K + + + + N+P + +P + ++ A+
Sbjct: 229 KVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR 288
Query: 348 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
D + K+LV DP R++ AL HP++ D +E+
Sbjct: 289 DLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEV 323
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 137/322 (42%), Gaps = 61/322 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 41 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 93
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
I++ L H N+V+ FY++ E + VY+ + L E + R+
Sbjct: 94 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV---------------- 136
Query: 205 IRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
R SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK D
Sbjct: 137 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCD 194
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDK 318
FG + + G+ + S YY APE++ + S DVWS G + LL G+ F
Sbjct: 195 FGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 254
Query: 319 TEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKL 353
+ E+++ P + PW P A +L
Sbjct: 255 SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRL 314
Query: 354 LVKDPRARLTAAQALSHPWVRE 375
L P ARLT +A +H + E
Sbjct: 315 LEYTPTARLTPLEACAHSFFDE 336
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 77
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 118
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 119 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 173
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 174 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 233
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 234 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 293
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 294 ITAAQALAHAYFAQYHDPDDEPV 316
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 137/335 (40%), Gaps = 76/335 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VY+ MEL +D L ++I L
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL------MDANLXQVIQMELD-------- 124
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 ------HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLART 175
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WD 317
V + YY APEV+ E+ D+WS+G I IL GR W+
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 235
Query: 318 KTEDGI--------------FKEVLRNKPDFRRKPWPSI----------------SNSAK 347
K + + + + N+P + +P + ++ A+
Sbjct: 236 KVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR 295
Query: 348 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
D + K+LV DP R++ AL HP++ D +E+
Sbjct: 296 DLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEV 330
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 137/338 (40%), Gaps = 84/338 (24%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VYI MEL +D L ++I L
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL------MDANLCQVIQMELD-------- 124
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLART 175
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WD 317
+ V + YY APEV+ E+ D+WS+G I ++C + F W+
Sbjct: 176 AGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWN 235
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSISN--------------------------------- 344
K + +++ P F +K P++ N
Sbjct: 236 K----VIEQLGTPCPAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 291
Query: 345 -SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
A+D + K+LV D R++ +AL HP++ D SE
Sbjct: 292 SQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 128/310 (41%), Gaps = 58/310 (18%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKI---EKNKMILPIAVEDVKREVKILQALAGHENV 159
L+G G +G +K G VA+KK + +KM+ IA+ RE+K+L+ L HEN+
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAM----REIKLLKQLR-HENL 86
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVV 219
V + Y+ E + T L D + +K
Sbjct: 87 VNLLEVCKKKKRWYLVFEFVD-------------HTILDDLELFPNGLDYQVVQK----Y 129
Query: 220 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVG 278
+ Q++ CH H ++HRD+KPEN L + +K DFG + PG+ + D V
Sbjct: 130 LFQIINGIGFCHSHNIIHRDIKPENIL---VSQSGVVKLCDFGFARTLAAPGEVYDDEVA 186
Query: 279 SAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF-WDKTEDGIF----------- 324
+ +Y APE+L K G DVW+IG + + G F D D ++
Sbjct: 187 TRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIP 246
Query: 325 --KEVLRNKPDF---------RRKP----WPSISNSAKDFVKKLLVKDPRARLTAAQALS 369
+E+ P F R+P +P +S D KK L DP R A+ L
Sbjct: 247 RHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306
Query: 370 HPWVREGGDA 379
H + + G A
Sbjct: 307 HDFFQMDGFA 316
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 131/309 (42%), Gaps = 54/309 (17%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
YT K++G+G FG + A D VA+KK+ ++K RE++I++ + H
Sbjct: 42 YTNCKVIGNGSFGVVFQA-KLVESDEVAIKKVLQDKRF-------KNRELQIMR-IVKHP 92
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
NVV F + G+ D + ++ + + A R ++ +
Sbjct: 93 NVVDLKAFFYSN------------GDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPM 140
Query: 218 VVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
++++ Q+LR A H G+ HRD+KP+N L LK DFG + + G+
Sbjct: 141 LLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPP--SGVLKLIDFGSAKILIAGEPN 198
Query: 274 QDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 329
+ S YY APE++ + + D+WS G + L+ G+ F ++ E+++
Sbjct: 199 VSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVL 258
Query: 330 ------------------NKPDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQ 366
P R P+ P A D + +LL P ARLTA +
Sbjct: 259 GTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIE 318
Query: 367 ALSHPWVRE 375
AL HP+ E
Sbjct: 319 ALCHPFFDE 327
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 138/296 (46%), Gaps = 45/296 (15%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K+LG+G G T V G VAVK++ + IA+ E+K+L H NV++
Sbjct: 21 KILGYGSSG-TVVFQGSFQGRPVAVKRMLID--FCDIAL----MEIKLLTESDDHPNVIR 73
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+Y + D ++YIA+ELC L ++ + S L ++K E + ++R
Sbjct: 74 YYCSETTDRFLYIALELCNLN------LQDLVESKNVSDENLKLQK-----EYNPISLLR 122
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLF----------KSAKEDSSLKATDFGLSDFIKPGK 271
Q+ A H ++HRD+KP+N L ++ E+ + +DFGL + G+
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 272 -----KFQDIVGSAYYVAPEVL--------KRKSGPESDVWSIG-VITYILLCGRRPFWD 317
+ G++ + APE+L KR+ D++S+G V YIL G+ PF D
Sbjct: 183 SSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
Query: 318 KT--EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 371
K E I + + + + + S+ A D + +++ DP R TA + L HP
Sbjct: 243 KYSRESNIIRGIF-SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 137/322 (42%), Gaps = 61/322 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 49 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 101
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
I++ L H N+V+ FY++ E + VY+ + L E + R+
Sbjct: 102 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV---------------- 144
Query: 205 IRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
R SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK D
Sbjct: 145 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCD 202
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDK 318
FG + + G+ + S YY APE++ + S DVWS G + LL G+ F
Sbjct: 203 FGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 262
Query: 319 TEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKL 353
+ E+++ P + PW P A +L
Sbjct: 263 SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRL 322
Query: 354 LVKDPRARLTAAQALSHPWVRE 375
L P ARLT +A +H + E
Sbjct: 323 LEYTPTARLTPLEACAHSFFDE 344
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 78
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 79 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 119
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 120 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 174
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 175 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 234
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 235 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 294
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 295 ITAAQALAHAYFAQYHDPDDEPV 317
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 140/327 (42%), Gaps = 61/327 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ + K RE++
Sbjct: 13 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAF-------KNRELQ 65
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
I++ L H N+V+ FY++ E + VY+ + +LD + A + +
Sbjct: 66 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNL-------VLDYVPATV---------YRV 108
Query: 205 IRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
R SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK D
Sbjct: 109 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCD 166
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDK 318
FG + + G+ + S YY APE++ + S DVWS G + LL G+ F
Sbjct: 167 FGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
Query: 319 TEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKL 353
+ E+++ P + PW P A +L
Sbjct: 227 SGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRL 286
Query: 354 LVKDPRARLTAAQALSHPWVREGGDAS 380
L P ARLT +A +H + E D +
Sbjct: 287 LEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 139/327 (42%), Gaps = 61/327 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 25 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 77
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
I++ L H N+V+ FY++ E + VY+ + L E + R+
Sbjct: 78 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV---------------- 120
Query: 205 IRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
R SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK D
Sbjct: 121 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCD 178
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDK 318
FG + + G+ + S YY APE++ + S DVWS G + LL G+ F
Sbjct: 179 FGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 238
Query: 319 TEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKL 353
+ E+++ P + PW P A +L
Sbjct: 239 SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRL 298
Query: 354 LVKDPRARLTAAQALSHPWVREGGDAS 380
L P ARLT +A +H + E D +
Sbjct: 299 LEYTPTARLTPLEACAHSFFDELRDPN 325
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 137/322 (42%), Gaps = 61/322 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 18 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 70
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
I++ L H N+V+ FY++ E + VY+ + L E + R+
Sbjct: 71 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV---------------- 113
Query: 205 IRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
R SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK D
Sbjct: 114 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCD 171
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDK 318
FG + + G+ + S YY APE++ + S DVWS G + LL G+ F
Sbjct: 172 FGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 231
Query: 319 TEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKL 353
+ E+++ P + PW P A +L
Sbjct: 232 SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRL 291
Query: 354 LVKDPRARLTAAQALSHPWVRE 375
L P ARLT +A +H + E
Sbjct: 292 LEYTPTARLTPLEACAHSFFDE 313
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 139/327 (42%), Gaps = 61/327 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 21 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 73
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
I++ L H N+V+ FY++ E + VY+ + L E + R+
Sbjct: 74 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV---------------- 116
Query: 205 IRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
R SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK D
Sbjct: 117 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCD 174
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDK 318
FG + + G+ + S YY APE++ + S DVWS G + LL G+ F
Sbjct: 175 FGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 234
Query: 319 TEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKL 353
+ E+++ P + PW P A +L
Sbjct: 235 SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRL 294
Query: 354 LVKDPRARLTAAQALSHPWVREGGDAS 380
L P ARLT +A +H + E D +
Sbjct: 295 LEYTPTARLTPLEACAHSFFDELRDPN 321
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 137/322 (42%), Gaps = 61/322 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 51 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 103
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
I++ L H N+V+ FY++ E + VY+ + L E + R+
Sbjct: 104 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV---------------- 146
Query: 205 IRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
R SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK D
Sbjct: 147 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCD 204
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDK 318
FG + + G+ + S YY APE++ + S DVWS G + LL G+ F
Sbjct: 205 FGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 264
Query: 319 TEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKL 353
+ E+++ P + PW P A +L
Sbjct: 265 SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRL 324
Query: 354 LVKDPRARLTAAQALSHPWVRE 375
L P ARLT +A +H + E
Sbjct: 325 LEYTPTARLTPLEACAHSFFDE 346
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 139/327 (42%), Gaps = 61/327 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 32 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 84
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
I++ L H N+V+ FY++ E + VY+ + L E + R+
Sbjct: 85 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV---------------- 127
Query: 205 IRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
R SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK D
Sbjct: 128 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCD 185
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDK 318
FG + + G+ + S YY APE++ + S DVWS G + LL G+ F
Sbjct: 186 FGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 245
Query: 319 TEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKL 353
+ E+++ P + PW P A +L
Sbjct: 246 SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRL 305
Query: 354 LVKDPRARLTAAQALSHPWVREGGDAS 380
L P ARLT +A +H + E D +
Sbjct: 306 LEYTPTARLTPLEACAHSFFDELRDPN 332
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 137/335 (40%), Gaps = 76/335 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VY+ MEL +D L ++I L
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL------MDANLXQVIQMELD-------- 124
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 ------HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLART 175
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WD 317
V + YY APEV+ E+ D+WS+G I IL GR W+
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 235
Query: 318 KTEDGI--------------FKEVLRNKPDFRRKPWPSI----------------SNSAK 347
K + + + + N+P + +P + ++ A+
Sbjct: 236 KVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR 295
Query: 348 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
D + K+LV DP R++ AL HP++ D +E+
Sbjct: 296 DLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEV 330
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 138/296 (46%), Gaps = 45/296 (15%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K+LG+G G T V G VAVK++ + IA+ E+K+L H NV++
Sbjct: 21 KILGYGSSG-TVVFQGSFQGRPVAVKRMLID--FCDIAL----MEIKLLTESDDHPNVIR 73
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+Y + D ++YIA+ELC L ++ + S L ++K E + ++R
Sbjct: 74 YYCSETTDRFLYIALELCNLN------LQDLVESKNVSDENLKLQK-----EYNPISLLR 122
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLF----------KSAKEDSSLKATDFGLSDFIKPGK 271
Q+ A H ++HRD+KP+N L ++ E+ + +DFGL + G+
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 272 -----KFQDIVGSAYYVAPEVL--------KRKSGPESDVWSIG-VITYILLCGRRPFWD 317
+ G++ + APE+L KR+ D++S+G V YIL G+ PF D
Sbjct: 183 XXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
Query: 318 KT--EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 371
K E I + + + + + S+ A D + +++ DP R TA + L HP
Sbjct: 243 KYSRESNIIRGIF-SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 139/327 (42%), Gaps = 61/327 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 13 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 65
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
I++ L H N+V+ FY++ E + VY+ + L E + R+
Sbjct: 66 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV---------------- 108
Query: 205 IRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
R SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK D
Sbjct: 109 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCD 166
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDK 318
FG + + G+ + S YY APE++ + S DVWS G + LL G+ F
Sbjct: 167 FGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
Query: 319 TEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKL 353
+ E+++ P + PW P A +L
Sbjct: 227 SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRL 286
Query: 354 LVKDPRARLTAAQALSHPWVREGGDAS 380
L P ARLT +A +H + E D +
Sbjct: 287 LEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 139/327 (42%), Gaps = 61/327 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 26 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 78
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
I++ L H N+V+ FY++ E + VY+ + L E + R+
Sbjct: 79 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV---------------- 121
Query: 205 IRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
R SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK D
Sbjct: 122 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCD 179
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDK 318
FG + + G+ + S YY APE++ + S DVWS G + LL G+ F
Sbjct: 180 FGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 239
Query: 319 TEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKL 353
+ E+++ P + PW P A +L
Sbjct: 240 SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRL 299
Query: 354 LVKDPRARLTAAQALSHPWVREGGDAS 380
L P ARLT +A +H + E D +
Sbjct: 300 LEYTPTARLTPLEACAHSFFDELRDPN 326
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 139/327 (42%), Gaps = 61/327 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 25 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 77
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
I++ L H N+V+ FY++ E + VY+ + L E + R+
Sbjct: 78 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV---------------- 120
Query: 205 IRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
R SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK D
Sbjct: 121 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCD 178
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDK 318
FG + + G+ + S YY APE++ + S DVWS G + LL G+ F
Sbjct: 179 FGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 238
Query: 319 TEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKL 353
+ E+++ P + PW P A +L
Sbjct: 239 SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRL 298
Query: 354 LVKDPRARLTAAQALSHPWVREGGDAS 380
L P ARLT +A +H + E D +
Sbjct: 299 LEYTPTARLTPLEACAHSFFDELRDPN 325
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 139/327 (42%), Gaps = 61/327 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 13 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 65
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
I++ L H N+V+ FY++ E + VY+ + L E + R+
Sbjct: 66 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV---------------- 108
Query: 205 IRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
R SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK D
Sbjct: 109 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCD 166
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDK 318
FG + + G+ + S YY APE++ + S DVWS G + LL G+ F
Sbjct: 167 FGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
Query: 319 TEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKL 353
+ E+++ P + PW P A +L
Sbjct: 227 SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRL 286
Query: 354 LVKDPRARLTAAQALSHPWVREGGDAS 380
L P ARLT +A +H + E D +
Sbjct: 287 LEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 139/327 (42%), Gaps = 61/327 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 14 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 66
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
I++ L H N+V+ FY++ E + VY+ + L E + R+
Sbjct: 67 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV---------------- 109
Query: 205 IRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
R SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK D
Sbjct: 110 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCD 167
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDK 318
FG + + G+ + S YY APE++ + S DVWS G + LL G+ F
Sbjct: 168 FGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 227
Query: 319 TEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKL 353
+ E+++ P + PW P A +L
Sbjct: 228 SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRL 287
Query: 354 LVKDPRARLTAAQALSHPWVREGGDAS 380
L P ARLT +A +H + E D +
Sbjct: 288 LEYTPTARLTPLEACAHSFFDELRDPN 314
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 139/327 (42%), Gaps = 61/327 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 17 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 69
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
I++ L H N+V+ FY++ E + VY+ + L E + R+
Sbjct: 70 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV---------------- 112
Query: 205 IRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
R SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK D
Sbjct: 113 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCD 170
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDK 318
FG + + G+ + S YY APE++ + S DVWS G + LL G+ F
Sbjct: 171 FGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 230
Query: 319 TEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKL 353
+ E+++ P + PW P A +L
Sbjct: 231 SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRL 290
Query: 354 LVKDPRARLTAAQALSHPWVREGGDAS 380
L P ARLT +A +H + E D +
Sbjct: 291 LEYTPTARLTPLEACAHSFFDELRDPN 317
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 139/327 (42%), Gaps = 61/327 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 13 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 65
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
I++ L H N+V+ FY++ E + VY+ + L E + R+
Sbjct: 66 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV---------------- 108
Query: 205 IRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
R SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK D
Sbjct: 109 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCD 166
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDK 318
FG + + G+ + S YY APE++ + S DVWS G + LL G+ F
Sbjct: 167 FGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
Query: 319 TEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKL 353
+ E+++ P + PW P A +L
Sbjct: 227 SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRL 286
Query: 354 LVKDPRARLTAAQALSHPWVREGGDAS 380
L P ARLT +A +H + E D +
Sbjct: 287 LEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 138/327 (42%), Gaps = 61/327 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ + K RE++
Sbjct: 13 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAF-------KNRELQ 65
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
I++ L H N+V+ FY++ E + VY+ + L E + R+
Sbjct: 66 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV---------------- 108
Query: 205 IRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
R SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK D
Sbjct: 109 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCD 166
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDK 318
FG + + G+ + S YY APE++ + S DVWS G + LL G+ F
Sbjct: 167 FGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
Query: 319 TEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKL 353
+ E+++ P + PW P A +L
Sbjct: 227 SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRL 286
Query: 354 LVKDPRARLTAAQALSHPWVREGGDAS 380
L P ARLT +A +H + E D +
Sbjct: 287 LEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 127/301 (42%), Gaps = 37/301 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAV-KKIEKNKMILPIAVEDVKREVKILQALAG 155
+Y +G LLG G +G D R AV +K +P +VK+E+++L+ L
Sbjct: 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR- 64
Query: 156 HENVVKFYNAF--EDDNYVYIAMELCEGG--ELLDRILAKMISTTLTSAWFLAIRKDSRY 211
H+NV++ + E+ +Y+ ME C G E+LD + K +F + Y
Sbjct: 65 HKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEY 124
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-- 269
H G+VH+D+KP N L + +LK + G+++ + P
Sbjct: 125 L------------------HSQGIVHKDIKPGNLLLTTG---GTLKISALGVAEALHPFA 163
Query: 270 -GKKFQDIVGSAYYVAPEV---LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325
+ GS + PE+ L SG + D+WS GV Y + G PF +F+
Sbjct: 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFE 223
Query: 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 385
+ + P +S D +K +L +P R + Q H W R+ +E P+
Sbjct: 224 NIGKGSYAIPGDCGPPLS----DLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVP 279
Query: 386 I 386
I
Sbjct: 280 I 280
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 140/327 (42%), Gaps = 61/327 (18%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ + K RE++
Sbjct: 13 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAF-------KNRELQ 65
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
I++ L H N+V+ FY++ E + VY+ + L E + R+
Sbjct: 66 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV---------------- 108
Query: 205 IRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
R SR + + V+ Q+ R A H G+ HRD+KP+N L + + LK D
Sbjct: 109 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCD 166
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF-WD 317
FG + + G+ + S YY APE++ + S DVWS G + LL G+ F D
Sbjct: 167 FGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
Query: 318 KTEDGIF----------KEVLRNK---------PDFRRKPW-----PSISNSAKDFVKKL 353
D + +E +R P + PW P A +L
Sbjct: 227 SGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRL 286
Query: 354 LVKDPRARLTAAQALSHPWVREGGDAS 380
L P ARLT +A +H + E D +
Sbjct: 287 LEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 139/338 (41%), Gaps = 84/338 (24%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VYI MEL +D L ++I L
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL------MDANLCQVIQMELD-------- 124
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLART 175
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WD 317
+ V + YY APEV+ E+ D+WS+G I ++C + F W+
Sbjct: 176 AGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWN 235
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSI----------------------------------S 343
K + +++ P+F +K P++ +
Sbjct: 236 K----VIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 291
Query: 344 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
+ A+D + K+LV D R++ +AL HP++ D SE
Sbjct: 292 SQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 121
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK D+GL+
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDYGLAR--HTD 176
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 297 ITAAQALAHAYFAQYHDPDDEPV 319
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 138/338 (40%), Gaps = 84/338 (24%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 72
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VYI MEL +D L ++I L
Sbjct: 73 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL------MDANLCQVIQMELD-------- 118
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 119 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLART 169
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WD 317
V + YY APEV+ E+ D+WS+G I ++C + F W+
Sbjct: 170 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWN 229
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSI----------------------------------S 343
K + +++ P+F +K P++ +
Sbjct: 230 K----VIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 285
Query: 344 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
+ A+D + K+LV D R++ +AL HP++ D SE
Sbjct: 286 SQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSE 323
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 138/338 (40%), Gaps = 84/338 (24%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 29 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 83
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VYI MEL +D L ++I L
Sbjct: 84 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL------MDANLCQVIQMELD-------- 129
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 130 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLART 180
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WD 317
V + YY APEV+ E+ D+WS+G I ++C + F W+
Sbjct: 181 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWN 240
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSI----------------------------------S 343
K + +++ P+F +K P++ +
Sbjct: 241 K----VIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 296
Query: 344 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
+ A+D + K+LV D R++ +AL HP++ D SE
Sbjct: 297 SQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSE 334
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 133/296 (44%), Gaps = 33/296 (11%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D DF++ LG G G + + K +G +A K I I P + RE+++L
Sbjct: 24 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL 77
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
+V FY AF D + I ME +GG LD++L K A R +
Sbjct: 78 HE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVLKK------------AGRIPEQ 123
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
K + V++ + + + H ++HRD+KP N L S E +K DFG+S +
Sbjct: 124 ILGKVSIAVIKGLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDS 177
Query: 271 KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL- 328
VG+ Y++PE L+ +SD+WS+G+ + GR P + E+L
Sbjct: 178 MA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLD 236
Query: 329 --RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
N+P + P S +DFV K L+K+P R Q + H +++ DA E+
Sbjct: 237 YIVNEPP-PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 290
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 127/279 (45%), Gaps = 39/279 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G FG + +G + +K+I ++M E+ +REV +L + H N+V++
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK-EREESRREVAVLANMK-HPNIVQYR 89
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAK---MISTTLTSAWFLAIRKDSRYTEKDAAVVV 220
+FE++ +YI M+ CEGG+L RI A+ + WF+
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFV----------------- 132
Query: 221 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGS 279
Q+ H ++HRD+K +N +D +++ DFG++ + + + +G+
Sbjct: 133 -QICLALKHVHDRKILHRDIKSQNIFL---TKDGTVQLGDFGIARVLNSTVELARACIGT 188
Query: 280 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 338
YY++PE+ + K +SD+W++G + Y L + F + + +++
Sbjct: 189 PYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS------- 241
Query: 339 WPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
+P + S + V +L ++PR R + L ++
Sbjct: 242 FPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFI 280
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 140/338 (41%), Gaps = 84/338 (24%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
+ H+N++ N F E+ VYI MEL +D L+++I L
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL------MDANLSQVIQMELD-------- 124
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D++LK DFGL+
Sbjct: 125 ------HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLART 175
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WD 317
V + YY APEV+ E+ D+WS+G I ++ G F W+
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 235
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSI----------------------------------S 343
K + +++ P+F +K P++ +
Sbjct: 236 K----VIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 291
Query: 344 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
+ A+D + K+LV D R++ +AL HP++ D SE
Sbjct: 292 SQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 119/265 (44%), Gaps = 26/265 (9%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
+LG G FG ++ K + AVK ++K+ +I VE E ++L + +
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
++ F+ + +Y ME GG+L+ I++ R+ E A +
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDLM-----------------YHIQQVGRFKEPHAVFYAAE 450
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAY 281
+ G+++RD+K +N + S + +K DFG+ + I G + G+
Sbjct: 451 IAIGLFFLQSKGIIYRDLKLDNVMLDS---EGHIKIADFGMCKENIWDGVTTKXFCGTPD 507
Query: 282 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ + G D W+ GV+ Y +L G+ PF + ED +F+ ++ + + +
Sbjct: 508 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK---- 563
Query: 341 SISNSAKDFVKKLLVKDPRARLTAA 365
S+S A K L+ K P RL
Sbjct: 564 SMSKEAVAICKGLMTKHPGKRLGCG 588
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 140/338 (41%), Gaps = 84/338 (24%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
+ H+N++ N F E+ VYI MEL +D L+++I L
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL------MDANLSQVIQMELD-------- 124
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D++LK DFGL+
Sbjct: 125 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLART 175
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WD 317
V + YY APEV+ E+ D+WS+G I ++ G F W+
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 235
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSI----------------------------------S 343
K + +++ P+F +K P++ +
Sbjct: 236 K----VIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 291
Query: 344 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
+ A+D + K+LV D R++ +AL HP++ D SE
Sbjct: 292 SQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 129/309 (41%), Gaps = 49/309 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G A D G +VA+KK+ + + + RE+++L+ + HENV+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYR-PFQSELFAKRAYRELRLLKHMR-HENVIGLL 90
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ F D E LD + + K + E +V QM
Sbjct: 91 DVFTPD-------------ETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQM 137
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV 283
L+ H G++HRD+KP N + ED LK DFGL+ + + V + +Y
Sbjct: 138 LKGLRYIHAAGIIHRDLKPGNL---AVNEDCELKILDFGLAR--QADSEMXGXVVTRWYR 192
Query: 284 APEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR------------ 329
APEV+ + D+WS+G I ++ G+ F KE+++
Sbjct: 193 APEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR 252
Query: 330 -----------NKPDFRRKPWPSISNSAK----DFVKKLLVKDPRARLTAAQALSHPWVR 374
P+ +K + SI +A + ++K+LV D R+TA +AL+HP+
Sbjct: 253 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 312
Query: 375 EGGDASEIP 383
D + P
Sbjct: 313 SLHDTEDEP 321
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 127/278 (45%), Gaps = 29/278 (10%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D +FD + I + +G G FG + A+K + K K + V +V +E++I+
Sbjct: 11 DVNFDH-FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIM 69
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
Q L H +V + +F+D+ +++ ++L GG+L ++++
Sbjct: 70 QGLE-HPFLVNLWYSFQDEEDMFMVVDLLLGGDLR-----------------YHLQQNVH 111
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
+ E+ + + +++ ++HRDMKP+N L E + TDF ++ +
Sbjct: 112 FKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLD---EHGHVHITDFNIAAMLPRE 168
Query: 271 KKFQDIVGSAYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
+ + G+ Y+APE+ + G D WS+GV Y LL GRRP+ ++ KE
Sbjct: 169 TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS-KE 227
Query: 327 VLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLT 363
++ + +PS S +KKLL +P R +
Sbjct: 228 IVHTF-ETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFS 264
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 145/369 (39%), Gaps = 84/369 (22%)
Query: 51 HQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFG 110
H QER Y+Q K + R Q + P G G +G
Sbjct: 20 HMSQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYG 56
Query: 111 YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF---- 166
A D G RVAVKK+ + + I + RE+++L+ + HENV+ + F
Sbjct: 57 SVCAAFDTKTGHRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-HENVIGLLDVFTPAR 114
Query: 167 --EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQML 224
E+ N VY+ L G +L + I K + T+ ++ Q+L
Sbjct: 115 SLEEFNDVYLVTHLM-GADLNN------------------IVKCQKLTDDHVQFLIYQIL 155
Query: 225 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 284
R H ++HRD+KP N + ED LK DFGL+ + V + +Y A
Sbjct: 156 RGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRA 210
Query: 285 PEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP-------- 332
PE++ D+WS+G I LL GR F K +LR P
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 270
Query: 333 ----------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 271 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
Query: 376 GGDASEIPI 384
D + P+
Sbjct: 331 YHDPDDEPV 339
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 143/369 (38%), Gaps = 84/369 (22%)
Query: 51 HQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFG 110
H QER Y+Q K + R Q + P G G +G
Sbjct: 20 HMSQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYG 56
Query: 111 YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF---- 166
A D G RVAVKK+ + + I + RE+++L+ + HENV+ + F
Sbjct: 57 SVCAAFDTKTGHRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-HENVIGLLDVFTPAR 114
Query: 167 --EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQML 224
E+ N VY+ T L A I K + T+ ++ Q+L
Sbjct: 115 SLEEFNDVYLV-------------------THLMGADLNNIVKCQKLTDDHVQFLIYQIL 155
Query: 225 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 284
R H ++HRD+KP N + ED LK DFGL+ + V + +Y A
Sbjct: 156 RGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMXGXVATRWYRA 210
Query: 285 PEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP-------- 332
PE++ D+WS+G I LL GR F K +LR P
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 270
Query: 333 ----------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 271 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
Query: 376 GGDASEIPI 384
D + P+
Sbjct: 331 YHDPDDEPV 339
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 138/322 (42%), Gaps = 61/322 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G + D +G ++AVKK+ + + I + RE+++L+ + H
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 109
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 110 ENVIGLLDVFTPATSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 150
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 151 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD-- 205
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F ++++
Sbjct: 206 DEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIM 265
Query: 329 R-----------------------NKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRAR 361
R + P ++ + + + A D ++K+LV D R
Sbjct: 266 RLTGTPPASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKR 325
Query: 362 LTAAQALSHPWVREGGDASEIP 383
+TA++AL+HP+ + D + P
Sbjct: 326 ITASEALAHPYFSQYHDPDDEP 347
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 125/285 (43%), Gaps = 33/285 (11%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDV----KREV 147
K + RY I LG G Y+A D +VA+K I I P E+ +REV
Sbjct: 7 KIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAI----FIPPREKEETLKRFEREV 62
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
L+ H+N+V + E+D+ Y+ ME EG L S + S L++
Sbjct: 63 HNSSQLS-HQNIVSMIDVDEEDDCYYLVMEYIEGPTL---------SEYIESHGPLSVDT 112
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+T Q+L H +VHRD+KP+N L S K +LK DFG++ +
Sbjct: 113 AINFT--------NQILDGIKHAHDMRIVHRDIKPQNILIDSNK---TLKIFDFGIAKAL 161
Query: 268 KPGKKFQD--IVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGI- 323
Q ++G+ Y +PE K ++ E +D++SIG++ Y +L G PF +T I
Sbjct: 162 SETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA 221
Query: 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368
K + + P+ I S + + + KD R Q +
Sbjct: 222 IKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEM 266
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 145/369 (39%), Gaps = 84/369 (22%)
Query: 51 HQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFG 110
H QER Y+Q K + R Q + P G G +G
Sbjct: 19 HMSQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYG 55
Query: 111 YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF---- 166
A D G RVAVKK+ + + I + RE+++L+ + HENV+ + F
Sbjct: 56 SVCAAFDTKTGHRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-HENVIGLLDVFTPAR 113
Query: 167 --EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQML 224
E+ N VY+ L G +L + I K + T+ ++ Q+L
Sbjct: 114 SLEEFNDVYLVTHLM-GADLNN------------------IVKCQKLTDDHVQFLIYQIL 154
Query: 225 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 284
R H ++HRD+KP N + ED LK DFGL+ + V + +Y A
Sbjct: 155 RGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRA 209
Query: 285 PEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP-------- 332
PE++ D+WS+G I LL GR F K +LR P
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 269
Query: 333 ----------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 270 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 329
Query: 376 GGDASEIPI 384
D + P+
Sbjct: 330 YHDPDDEPV 338
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 137/295 (46%), Gaps = 35/295 (11%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D DF++ LG G G + + K +G +A K I I P + RE+++L
Sbjct: 8 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL 61
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
+V FY AF D + I ME +GG LD++L K A R +
Sbjct: 62 HE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVLKK------------AGRIPEQ 107
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
K + V++ + + + H ++HRD+KP N L S E +K DFG+S +
Sbjct: 108 ILGKVSIAVIKGLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-D 160
Query: 271 KKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK--EV 327
+ + VG+ Y++PE L+ +SD+WS+G+ + GR P + IF+ +
Sbjct: 161 EMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP---RPPMAIFELLDY 217
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
+ N+P + P S +DFV K L+K+P R Q + H +++ DA E+
Sbjct: 218 IVNEPP-PKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 270
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 134/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 121
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DF L+
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFYLAR--HTD 176
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 297 ITAAQALAHAYFAQYHDPDDEPV 319
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 135/308 (43%), Gaps = 62/308 (20%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI------EKNKMILPIAVEDVKREVKI 149
+RY LG GQF Y A DK VA+KKI E I A+ RE+K+
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL----REIKL 65
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGG-ELLDRILAKMISTTLTSAWFLAIRKD 208
LQ L+ H N++ +AF + + + + E E++ + + +++ + A+ L +
Sbjct: 66 LQELS-HPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQG 124
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFI 267
Y H H ++HRD+KP N L E+ LK DFGL+ F
Sbjct: 125 LEY------------------LHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFG 163
Query: 268 KPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED---- 321
P + + V + +Y APE+L R G D+W++G I LL R PF D
Sbjct: 164 SPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-RVPFLPGDSDLDQL 222
Query: 322 -GIFKEV----------LRNKPDFRR-KPWPSI---------SNSAKDFVKKLLVKDPRA 360
IF+ + + + PD+ K +P I + D ++ L + +P A
Sbjct: 223 TRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCA 282
Query: 361 RLTAAQAL 368
R+TA QAL
Sbjct: 283 RITATQAL 290
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 139/338 (41%), Gaps = 84/338 (24%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VYI MEL +D L+++I L
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL------MDANLSQVIQMELD-------- 124
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D++LK DFGL+
Sbjct: 125 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLART 175
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WD 317
V + YY APEV+ E+ D+WS+G I ++ G F W+
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 235
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSI----------------------------------S 343
K + +++ P+F +K P++ +
Sbjct: 236 K----VIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 291
Query: 344 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
+ A+D + K+LV D R++ +AL HP++ D SE
Sbjct: 292 SQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 134/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 121
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK FGL+
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILGFGLAR--HTD 176
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 297 ITAAQALAHAYFAQYHDPDDEPV 319
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 137/301 (45%), Gaps = 47/301 (15%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA-VEDVKREVKIL 150
+DFD + +++G G + + K DR+ K+ K +++ ++ V+ E +
Sbjct: 20 QDFD----LLRVIGRGSYAKVLLVRLKKT-DRIYAMKVVKKELVNDDEDIDWVQTEKHVF 74
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
+ + H +V ++ F+ ++ ++ +E GG+L+ +++ +
Sbjct: 75 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM-----------------FHMQRQRK 117
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKP 269
E+ A ++ H G+++RD+K +N L S + +K TD+G+ + ++P
Sbjct: 118 LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRP 174
Query: 270 GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF---------WDKT 319
G G+ Y+APE+L+ + G D W++GV+ + ++ GR PF T
Sbjct: 175 GDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 234
Query: 320 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWV 373
ED +F+ +L + R S+S A +K L KDP+ RL A HP+
Sbjct: 235 EDYLFQVILEKQIRIPR----SMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFF 290
Query: 374 R 374
R
Sbjct: 291 R 291
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 101/179 (56%), Gaps = 21/179 (11%)
Query: 387 SVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALA 446
++L N++ F K + LK+ AL +A L D E+ +LR+ F A+DVD +G++S +E+ L
Sbjct: 25 TLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLK 84
Query: 447 KDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAA--- 503
K + ++ + ++L+ ID N G + +++F+AAT+ ++ +L+ +
Sbjct: 85 K-IGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATI---------DKQTYLKKEVCLIP 134
Query: 504 FEKFDIDRDGFITPEELRMHTG--------LKGSIDPLLEEADIDKDGRISLSEFRRLL 554
F+ FDID +G I+ EEL+ G + +ID LL+E D++ DG I EF ++
Sbjct: 135 FKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMM 193
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 125/297 (42%), Gaps = 31/297 (10%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G++LG G ++A D + VAVK + + P +RE + AL H
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NH 71
Query: 157 ENVVKFYNAFEDDNYV----YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
+V Y+ E + YI ME +G L D + + T
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD-----------------IVHTEGPMT 114
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-- 270
K A V+ + H +G++HRD+KP N + + +++K DFG++ I
Sbjct: 115 PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARAIADSGN 171
Query: 271 --KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327
+ ++G+A Y++PE + S SDV+S+G + Y +L G PF + D + +
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQH 231
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR-EGGDASEIP 383
+R P +S V K L K+P R A + VR G+ E P
Sbjct: 232 VREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 137/338 (40%), Gaps = 84/338 (24%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VYI MEL +D L ++I L
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL------MDANLCQVIQMELD-------- 124
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLART 175
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WD 317
V + YY APEV+ E+ D+WS+G I ++ G F W+
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 235
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSI----------------------------------S 343
K + +++ P+F +K P++ +
Sbjct: 236 K----VIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 291
Query: 344 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
+ A+D + K+LV D R++ +AL HP++ D SE
Sbjct: 292 SQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 137/301 (45%), Gaps = 47/301 (15%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA-VEDVKREVKIL 150
+DFD + +++G G + + K DR+ K+ K +++ ++ V+ E +
Sbjct: 5 QDFD----LLRVIGRGSYAKVLLVRLKKT-DRIYAMKVVKKELVNDDEDIDWVQTEKHVF 59
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
+ + H +V ++ F+ ++ ++ +E GG+L+ +++ +
Sbjct: 60 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM-----------------FHMQRQRK 102
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKP 269
E+ A ++ H G+++RD+K +N L S + +K TD+G+ + ++P
Sbjct: 103 LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRP 159
Query: 270 GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF---------WDKT 319
G G+ Y+APE+L+ + G D W++GV+ + ++ GR PF T
Sbjct: 160 GDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 219
Query: 320 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWV 373
ED +F+ +L + R S+S A +K L KDP+ RL A HP+
Sbjct: 220 EDYLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 275
Query: 374 R 374
R
Sbjct: 276 R 276
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 138/338 (40%), Gaps = 84/338 (24%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VYI MEL +D L+++I L
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL------MDANLSQVIQMELD-------- 124
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLART 175
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WD 317
V + YY APEV+ E+ D+WS+G I ++ G F W+
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 235
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSI----------------------------------S 343
K + +++ P+F +K P++ +
Sbjct: 236 K----VIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 291
Query: 344 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
+ A+D + K+LV D R++ +AL HP++ D SE
Sbjct: 292 SQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 145/369 (39%), Gaps = 84/369 (22%)
Query: 51 HQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFG 110
H QER Y+Q K + R Q + P G G +G
Sbjct: 19 HMSQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYG 55
Query: 111 YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF---- 166
A D G RVAVKK+ + + I + RE+++L+ + HENV+ + F
Sbjct: 56 SVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-HENVIGLLDVFTPAR 113
Query: 167 --EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQML 224
E+ N VY+ L G +L + I K + T+ ++ Q+L
Sbjct: 114 SLEEFNDVYLVTHLM-GADLNN------------------IVKCQKLTDDHVQFLIYQIL 154
Query: 225 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 284
R H ++HRD+KP N + ED LK DFGL+ + V + +Y A
Sbjct: 155 RGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRA 209
Query: 285 PEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP-------- 332
PE++ D+WS+G I LL GR F K +LR P
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 269
Query: 333 ----------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 270 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 329
Query: 376 GGDASEIPI 384
D + P+
Sbjct: 330 YHDPDDEPV 338
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 145/369 (39%), Gaps = 84/369 (22%)
Query: 51 HQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFG 110
H QER Y+Q K + R Q + P G G +G
Sbjct: 20 HMSQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYG 56
Query: 111 YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF---- 166
A D G RVAVKK+ + + I + RE+++L+ + HENV+ + F
Sbjct: 57 SVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-HENVIGLLDVFTPAR 114
Query: 167 --EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQML 224
E+ N VY+ L G +L + I K + T+ ++ Q+L
Sbjct: 115 SLEEFNDVYLVTHLM-GADLNN------------------IVKCQKLTDDHVQFLIYQIL 155
Query: 225 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 284
R H ++HRD+KP N + ED LK DFGL+ + V + +Y A
Sbjct: 156 RGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRA 210
Query: 285 PEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP-------- 332
PE++ D+WS+G I LL GR F K +LR P
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 270
Query: 333 ----------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 271 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
Query: 376 GGDASEIPI 384
D + P+
Sbjct: 331 YHDPDDEPV 339
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 119/265 (44%), Gaps = 26/265 (9%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
+LG G FG ++ K + AVK ++K+ +I VE E ++L + +
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
++ F+ + +Y ME GG+L+ I++ R+ E A +
Sbjct: 87 HSCFQTMDRLYFVMEYVNGGDLM-----------------YHIQQVGRFKEPHAVFYAAE 129
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAY 281
+ G+++RD+K +N + S + +K DFG+ + I G + G+
Sbjct: 130 IAIGLFFLQSKGIIYRDLKLDNVMLDS---EGHIKIADFGMCKENIWDGVTTKXFCGTPD 186
Query: 282 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ + G D W+ GV+ Y +L G+ PF + ED +F+ ++ + + +
Sbjct: 187 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK---- 242
Query: 341 SISNSAKDFVKKLLVKDPRARLTAA 365
S+S A K L+ K P RL
Sbjct: 243 SMSKEAVAICKGLMTKHPGKRLGCG 267
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 137/301 (45%), Gaps = 47/301 (15%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA-VEDVKREVKIL 150
+DFD + +++G G + + K DR+ K+ K +++ ++ V+ E +
Sbjct: 9 QDFD----LLRVIGRGSYAKVLLVRLKKT-DRIYAMKVVKKELVNDDEDIDWVQTEKHVF 63
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
+ + H +V ++ F+ ++ ++ +E GG+L+ +++ +
Sbjct: 64 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM-----------------FHMQRQRK 106
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKP 269
E+ A ++ H G+++RD+K +N L S + +K TD+G+ + ++P
Sbjct: 107 LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRP 163
Query: 270 GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF---------WDKT 319
G G+ Y+APE+L+ + G D W++GV+ + ++ GR PF T
Sbjct: 164 GDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 223
Query: 320 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWV 373
ED +F+ +L + R S+S A +K L KDP+ RL A HP+
Sbjct: 224 EDYLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 279
Query: 374 R 374
R
Sbjct: 280 R 280
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 137/301 (45%), Gaps = 47/301 (15%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA-VEDVKREVKIL 150
+DFD + +++G G + + K DR+ ++ K +++ ++ V+ E +
Sbjct: 52 QDFD----LLRVIGRGSYAKVLLVRLKKT-DRIYAMRVVKKELVNDDEDIDWVQTEKHVF 106
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
+ + H +V ++ F+ ++ ++ +E GG+L+ +++ +
Sbjct: 107 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM-----------------FHMQRQRK 149
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKP 269
E+ A ++ H G+++RD+K +N L S + +K TD+G+ + ++P
Sbjct: 150 LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRP 206
Query: 270 GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF---------WDKT 319
G G+ Y+APE+L+ + G D W++GV+ + ++ GR PF T
Sbjct: 207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 266
Query: 320 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWV 373
ED +F+ +L + R S+S A +K L KDP+ RL A HP+
Sbjct: 267 EDYLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 322
Query: 374 R 374
R
Sbjct: 323 R 323
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 85.5 bits (210), Expect = 7e-17, Method: Composition-based stats.
Identities = 50/150 (33%), Positives = 87/150 (58%), Gaps = 11/150 (7%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
A L +EE+ L++ F ID D +G+I+ +E++ L K + +L ES + +++ A D +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGL-KRVGSELMESEIKDLMDAADIDK 59
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG- 528
G +D+ EF+AAT+H+++LE ++ +AF FD D G+IT +E++ G
Sbjct: 60 SGTIDYGEFIAATVHLNKLEREEN------LVSAFSYFDKDGSGYITLDEIQQACKDFGL 113
Query: 529 ---SIDPLLEEADIDKDGRISLSEFRRLLR 555
ID +++E D D DG+I EF ++R
Sbjct: 114 DDIHIDDMIKEIDQDNDGQIDYGEFAAMMR 143
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 137/338 (40%), Gaps = 84/338 (24%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 26 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 80
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VYI MEL +D L ++I L
Sbjct: 81 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL------MDANLCQVIQMELD-------- 126
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 127 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLART 177
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WD 317
V + YY APEV+ E+ D+WS+G I ++ G F W+
Sbjct: 178 AGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 237
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSI----------------------------------S 343
K + +++ P+F +K P++ +
Sbjct: 238 K----VIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 293
Query: 344 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
+ A+D + K+LV D R++ +AL HP++ D SE
Sbjct: 294 SQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSE 331
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 133/326 (40%), Gaps = 76/326 (23%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VY+ MEL +D L ++I L
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL------MDANLCQVIQMELD-------- 124
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLART 175
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WD 317
V + YY APEV+ E+ D+WS+G I IL GR W+
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 235
Query: 318 KTEDGI--------------FKEVLRNKPDFRRKPWPSI----------------SNSAK 347
K + + + + N+P + +P + ++ A+
Sbjct: 236 KVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR 295
Query: 348 DFVKKLLVKDPRARLTAAQALSHPWV 373
D + K+LV DP R++ AL HP++
Sbjct: 296 DLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 137/338 (40%), Gaps = 84/338 (24%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 79
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VYI MEL +D L ++I L
Sbjct: 80 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL------MDANLCQVIQMELD-------- 125
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 126 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLART 176
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WD 317
V + YY APEV+ E+ D+WS+G I ++ G F W+
Sbjct: 177 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 236
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSI----------------------------------S 343
K + +++ P+F +K P++ +
Sbjct: 237 K----VIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 292
Query: 344 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
+ A+D + K+LV D R++ +AL HP++ D SE
Sbjct: 293 SQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSE 330
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 134/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 121
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK D GL+
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDAGLARHTD-- 176
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 297 ITAAQALAHAYFAQYHDPDDEPV 319
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 137/338 (40%), Gaps = 84/338 (24%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VYI MEL +D L ++I L
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL------MDANLCQVIQMELD-------- 124
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLART 175
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WD 317
V + YY APEV+ E+ D+WS+G I ++ G F W+
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 235
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSI----------------------------------S 343
K + +++ P+F +K P++ +
Sbjct: 236 K----VIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 291
Query: 344 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
+ A+D + K+LV D R++ +AL HP++ D SE
Sbjct: 292 SQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 137/302 (45%), Gaps = 39/302 (12%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D DF++ LG G G + + K +G +A K I I P + RE+++L
Sbjct: 5 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL 58
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
+V FY AF D + I ME +GG LD++L K A R +
Sbjct: 59 HE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVLKK------------AGRIPEQ 104
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
K + V++ + + + H ++HRD+KP N L S E +K DFG+S +
Sbjct: 105 ILGKVSIAVIKGLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDS 158
Query: 271 KKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPF--WDKTED-----G 322
VG+ Y++PE L+ +SD+WS+G+ + GR P D ED
Sbjct: 159 MA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMA 217
Query: 323 IFK--EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 380
IF+ + + N+P + P S +DFV K L+K+P R Q + H +++ DA
Sbjct: 218 IFELLDYIVNEPP-PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR-SDAE 275
Query: 381 EI 382
E+
Sbjct: 276 EV 277
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 135/333 (40%), Gaps = 76/333 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VY+ MEL +D L ++I L
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL------MDANLXQVIQMELD-------- 124
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLART 175
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WD 317
V + YY APEV+ E+ D+WS+G I IL GR W+
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 235
Query: 318 KTEDGI--------------FKEVLRNKPDFRRKPWPSI----------------SNSAK 347
K + + + + N+P + +P + ++ A+
Sbjct: 236 KVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR 295
Query: 348 DFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 380
D + K+LV DP R++ AL HP++ D +
Sbjct: 296 DLLSKMLVIDPAKRISVDDALQHPYINVWYDPA 328
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 134/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 121
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK D GL+
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDGGLARHTD-- 176
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 297 ITAAQALAHAYFAQYHDPDDEPV 319
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 134/323 (41%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ L G +L + I K +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN------------------IVKCQK 121
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK D GL+
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDRGLARHTD-- 176
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 329 R--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKDPRAR 361
R P + P + +N A D ++K+LV D R
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 297 ITAAQALAHAYFAQYHDPDDEPV 319
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 126/303 (41%), Gaps = 41/303 (13%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED---VKREVKIL 150
F+ Y +G LLG G FG + + +VA+K I +N+++ + D EV +L
Sbjct: 29 FEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALL 88
Query: 151 Q---ALAGHENVVKFYNAFEDDNYVYIAME-LCEGGELLDRILAKMISTTLTSAWFLAIR 206
A GH V++ + FE + +E +L D I K
Sbjct: 89 WKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEK--------------- 133
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
E + Q++ CH G+VHRD+K EN L + K DFG
Sbjct: 134 --GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRR--GCAKLIDFGSGAL 189
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324
+ + + D G+ Y PE + R + VWS+G++ Y ++CG PF D
Sbjct: 190 LH-DEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF---ERD--- 242
Query: 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 384
+E+L + F +S +++ L P +R + + L PW++ A ++P+
Sbjct: 243 QEILEAELHFPAH----VSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQT--PAEDVPL 296
Query: 385 DIS 387
+ S
Sbjct: 297 NPS 299
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 138/352 (39%), Gaps = 66/352 (18%)
Query: 74 RRQTGV---IPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIE 130
RR GV +P G D RYT + +G G +G A D RVA+KKI
Sbjct: 18 RRTEGVGPGVPGEVEMVKGQPFDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKIS 77
Query: 131 KNKMILPIAVEDVKREVKILQALAGHENVVKF-----YNAFEDDNYVYIAMELCEGGELL 185
+ + RE++IL HENV+ + E VYI +L E
Sbjct: 78 PFEH--QTYCQRTLREIQILLRFR-HENVIGIRDILRASTLEAMRDVYIVQDLMETD--- 131
Query: 186 DRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 245
L K++ K + + + Q+LR H ++HRD+KP N
Sbjct: 132 ---LYKLL-------------KSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 175
Query: 246 LFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKRKSG--PESDVW 299
L + LK DFGL+ P + V + +Y APE++ G D+W
Sbjct: 176 LINTT---CDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIW 232
Query: 300 SIGVITYILLCGRRPFWDKTE-------DGIF----------------KEVLRNKPDFRR 336
S+G I +L R F K GI + L++ P +
Sbjct: 233 SVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQSLPSKTK 292
Query: 337 KPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 384
W P + A D + ++L +P R+T +AL+HP++ + D ++ P+
Sbjct: 293 VAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDPTDEPV 344
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 141/342 (41%), Gaps = 65/342 (19%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA-- 154
R+ + ++ G G FG + +K+ G VA+KK+ ++ RE++I+Q LA
Sbjct: 24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR-------NRELQIMQDLAVL 76
Query: 155 GHENVVK----FYNAFEDDN---YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
H N+V+ FY E D Y+ + ME + TL R+
Sbjct: 77 HHPNIVQLQSYFYTLGERDRRDIYLNVVME--------------YVPDTLHRCCRNYYRR 122
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 265
V + Q++R HL + HRD+KP N L A D +LK DFG +
Sbjct: 123 QVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEA--DGTLKLCDFGSAK 180
Query: 266 FIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 323
+ P + + S YY APE++ + D+WS+G I ++ G F G
Sbjct: 181 KLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ 240
Query: 324 FKEVLR----NKPDFRRK----------------PWPSI--------SNSAKDFVKKLLV 355
E++R + RK PW ++ + A D + LL
Sbjct: 241 LHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQ 300
Query: 356 KDPRARLTAAQALSHPWVREGGD-ASEIPIDISVLNNMRQFV 396
P R+ +AL HP+ E D A+++P + + ++ +F+
Sbjct: 301 YLPEERMKPYEALCHPYFDELHDPATKLPNNKDLPEDLFRFL 342
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 137/338 (40%), Gaps = 84/338 (24%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VYI MEL +D L ++I L
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL------MDANLCQVIQMELD-------- 124
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLART 175
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WD 317
V + YY APEV+ E+ D+WS+G I ++ G F W+
Sbjct: 176 AGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 235
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSI----------------------------------S 343
K + +++ P+F +K P++ +
Sbjct: 236 K----VIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKA 291
Query: 344 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
+ A+D + K+LV D R++ +AL HP++ D SE
Sbjct: 292 SQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 144/367 (39%), Gaps = 84/367 (22%)
Query: 53 HQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYT 112
QER Y+Q K + R Q + P G G +G
Sbjct: 9 SQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYGSV 45
Query: 113 YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF------ 166
A D G RVAVKK+ + + I + RE+++L+ + HENV+ + F
Sbjct: 46 CAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSL 103
Query: 167 EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRV 226
E+ N VY+ L G +L + I K + T+ ++ Q+LR
Sbjct: 104 EEFNDVYLVTHLM-GADLNN------------------IVKCQKLTDDHVQFLIYQILRG 144
Query: 227 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 286
H ++HRD+KP N + ED LK DFGL+ + V + +Y APE
Sbjct: 145 LKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTADEMTGYVATRWYRAPE 199
Query: 287 VLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP---------- 332
++ D+WS+G I LL GR F K +LR P
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 333 --------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 319
Query: 378 DASEIPI 384
D + P+
Sbjct: 320 DPDDEPV 326
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 144/367 (39%), Gaps = 84/367 (22%)
Query: 53 HQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYT 112
QER Y+Q K + R Q + P G G +G
Sbjct: 9 SQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYGSV 45
Query: 113 YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF------ 166
A D G RVAVKK+ + + I + RE+++L+ + HENV+ + F
Sbjct: 46 CAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSL 103
Query: 167 EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRV 226
E+ N VY+ L G +L + I K + T+ ++ Q+LR
Sbjct: 104 EEFNDVYLVTHLM-GADLNN------------------IVKCQKLTDDHVQFLIYQILRG 144
Query: 227 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 286
H ++HRD+KP N + ED LK DFGL+ + V + +Y APE
Sbjct: 145 LKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTADEMTGYVATRWYRAPE 199
Query: 287 VLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP---------- 332
++ D+WS+G I LL GR F K +LR P
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 333 --------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 319
Query: 378 DASEIPI 384
D + P+
Sbjct: 320 DPDDEPV 326
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 144/367 (39%), Gaps = 84/367 (22%)
Query: 53 HQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYT 112
QER Y+Q K + R Q + P G G +G
Sbjct: 9 SQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYGSV 45
Query: 113 YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF------ 166
A D G RVAVKK+ + + I + RE+++L+ + HENV+ + F
Sbjct: 46 CAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSL 103
Query: 167 EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRV 226
E+ N VY+ L G +L + I K + T+ ++ Q+LR
Sbjct: 104 EEFNDVYLVTHLM-GADLNN------------------IVKCQKLTDDHVQFLIYQILRG 144
Query: 227 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 286
H ++HRD+KP N + ED LK DFGL+ + V + +Y APE
Sbjct: 145 LKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTADEMTGYVATRWYRAPE 199
Query: 287 VLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP---------- 332
++ D+WS+G I LL GR F K +LR P
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 333 --------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 319
Query: 378 DASEIPI 384
D + P+
Sbjct: 320 DPDDEPV 326
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 148/364 (40%), Gaps = 110/364 (30%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP-IAVEDVKREVKILQALAGH 156
Y I L+G G +GY Y+A DK VA+KK+ N+M I + + RE+ IL L
Sbjct: 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKV--NRMFEDLIDCKRILREITILNRLKS- 84
Query: 157 ENVVKFYNAFEDDNY-----VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
+ +++ Y+ D+ +YI +E+ + L K+ T + FL
Sbjct: 85 DYIIRLYDLIIPDDLLKFDELYIVLEIADSD------LKKLFKTPI----FL-------- 126
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI---- 267
TE+ ++ +L H G++HRD+KP N L +D S+K DFGL+ I
Sbjct: 127 TEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLL---NQDCSVKVCDFGLARTINSEK 183
Query: 268 ------------KPG-------KKFQDIVGSAYYVAPE--VLKRKSGPESDVWSIGVITY 306
+PG K+ V + +Y APE +L+ D+WS G I
Sbjct: 184 DTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFA 243
Query: 307 ILL----------CGRRPFW----------DKTEDGIFKEVLR----------------- 329
LL R P + D+ + ++ R
Sbjct: 244 ELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDD 303
Query: 330 ----NKPDF--------RRKP------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 371
NKP+ RKP +PSIS+ + ++ +L +P R+T QAL HP
Sbjct: 304 LKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHP 363
Query: 372 WVRE 375
++++
Sbjct: 364 YLKD 367
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 141/328 (42%), Gaps = 61/328 (18%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
++Y++GK LG G FG D +G R A+KK+ ++ RE+ I++ L
Sbjct: 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP-------RYKNRELDIMKVL-D 58
Query: 156 HENVVKFYNAF-------------EDD-----------NYVYIAMELCEGGELLDRILAK 191
H N++K + F DD N + ++ + ++ +
Sbjct: 59 HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIME 118
Query: 192 MISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251
+ TL IR ++ + Q+ R H G+ HRD+KP+N L S
Sbjct: 119 YVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS-- 176
Query: 252 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILL 309
+D++LK DFG + + P + + S +Y APE++ + P D+WSIG + L+
Sbjct: 177 KDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI 236
Query: 310 CGRRPFWDKTE-DGIFK-----------EVLRNKPDFRRKPWPSI-------------SN 344
G+ F +T D + + +++R P + +P++ +
Sbjct: 237 LGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPS 296
Query: 345 SAKDFVKKLLVKDPRARLTAAQALSHPW 372
A D ++++L +P R+ +A++HP+
Sbjct: 297 LAIDLLEQILRYEPDLRINPYEAMAHPF 324
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 145/367 (39%), Gaps = 84/367 (22%)
Query: 53 HQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYT 112
QER Y+Q K + R Q + P +G G +G
Sbjct: 7 SQERPTFYRQELNKTIWEVPERYQ-NLSP----------------------IGSGAYGSV 43
Query: 113 YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF------ 166
A D G RVAVKK+ + + I + RE+++L+ + HENV+ + F
Sbjct: 44 CAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSL 101
Query: 167 EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRV 226
E+ N VY+ L G +L + I K + T+ ++ Q+LR
Sbjct: 102 EEFNDVYLVTHLM-GADLNN------------------IVKCQKLTDDHVQFLIYQILRG 142
Query: 227 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 286
H ++HRD+KP N + ED LK DFGL+ + V + +Y APE
Sbjct: 143 LKYIHSADIIHRDLKPSNL---AVNEDXELKILDFGLAR--HTDDEMTGYVATRWYRAPE 197
Query: 287 VLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP---------- 332
++ D+WS+G I LL GR F K +LR P
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 257
Query: 333 --------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 258 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 317
Query: 378 DASEIPI 384
D + P+
Sbjct: 318 DPDDEPV 324
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 132/315 (41%), Gaps = 61/315 (19%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G A D +VAVKK+ + L I RE+++L+ L HENV+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSL-IHARRTYRELRLLKHLK-HENVIGLL 93
Query: 164 NAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+ F ED + VY+ TTL A I K +++
Sbjct: 94 DVFTPATSIEDFSEVYLV-------------------TTLMGADLNNIVKSQALSDEHVQ 134
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+V Q+LR H G++HRD+KP N + EDS L+ DFGL+ + ++ V
Sbjct: 135 FLVYQLLRGLKYIHSAGIIHRDLKPSNV---AVNEDSELRILDFGLAR--QADEEMTGYV 189
Query: 278 GSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPF-------------------- 315
+ +Y APE++ D+WS+G I LL G+ F
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPS 249
Query: 316 ---WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK----DFVKKLLVKDPRARLTAAQAL 368
K + +++ P +K SI A D + ++LV D R++AA+AL
Sbjct: 250 PEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEAL 309
Query: 369 SHPWVREGGDASEIP 383
+H + + D + P
Sbjct: 310 AHAYFSQYHDPEDEP 324
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 124/297 (41%), Gaps = 31/297 (10%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G++LG G ++A D + VAVK + + P +RE + AL H
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NH 71
Query: 157 ENVVKFYNAFEDDNYV----YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
+V Y+ E + YI ME +G L D + + T
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD-----------------IVHTEGPMT 114
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-- 270
K A V+ + H +G++HRD+KP N L + +++K DFG++ I
Sbjct: 115 PKRAIEVIADACQALNFSHQNGIIHRDVKPANILISAT---NAVKVVDFGIARAIADSGN 171
Query: 271 --KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327
+ ++G+A Y++PE + S SDV+S+G + Y +L G PF + + +
Sbjct: 172 SVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH 231
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR-EGGDASEIP 383
+R P +S V K L K+P R A + VR G+ E P
Sbjct: 232 VREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 144/367 (39%), Gaps = 84/367 (22%)
Query: 53 HQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYT 112
QER Y+Q K + R Q + P G G +G
Sbjct: 7 SQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYGSV 43
Query: 113 YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF------ 166
A D G RVAVKK+ + + I + RE+++L+ + HENV+ + F
Sbjct: 44 CAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSL 101
Query: 167 EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRV 226
E+ N VY+ L G +L + I K + T+ ++ Q+LR
Sbjct: 102 EEFNDVYLVTHLM-GADLNN------------------IVKCQKLTDDHVQFLIYQILRG 142
Query: 227 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 286
H ++HRD+KP N + ED LK DFGL+ + V + +Y APE
Sbjct: 143 LKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPE 197
Query: 287 VLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP---------- 332
++ D+WS+G I LL GR F K +LR P
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 257
Query: 333 --------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 258 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 317
Query: 378 DASEIPI 384
D + P+
Sbjct: 318 DPDDEPV 324
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 115/253 (45%), Gaps = 41/253 (16%)
Query: 139 AVEDVKREVKILQALAGHEN-VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTL 197
++ + E+ L L H + +++ Y+ D Y+Y+ ME C +L
Sbjct: 69 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDL------------- 114
Query: 198 TSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257
++W ++K + + ML H HG+VH D+KP NFL D LK
Sbjct: 115 -NSW---LKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLK 166
Query: 258 ATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLK-----RKSGPES-------DVWSIG 302
DFG+++ ++P VG+ Y+ PE +K R++G DVWS+G
Sbjct: 167 LIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 226
Query: 303 VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRAR 361
I Y + G+ PF + + I K P+ + +P I +D +K L +DP+ R
Sbjct: 227 CILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQR 284
Query: 362 LTAAQALSHPWVR 374
++ + L+HP+V+
Sbjct: 285 ISIPELLAHPYVQ 297
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 144/367 (39%), Gaps = 84/367 (22%)
Query: 53 HQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYT 112
QER Y+Q K + R Q + P G G +G
Sbjct: 7 SQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYGSV 43
Query: 113 YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF------ 166
A D G RVAVKK+ + + I + RE+++L+ + HENV+ + F
Sbjct: 44 CAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSL 101
Query: 167 EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRV 226
E+ N VY+ L G +L + I K + T+ ++ Q+LR
Sbjct: 102 EEFNDVYLVTHLM-GADLNN------------------IVKCQKLTDDHVQFLIYQILRG 142
Query: 227 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 286
H ++HRD+KP N + ED LK DFGL+ + V + +Y APE
Sbjct: 143 LKYIHSADIIHRDLKPSNL---AVNEDXELKILDFGLAR--HTDDEMTGYVATRWYRAPE 197
Query: 287 VLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP---------- 332
++ D+WS+G I LL GR F K +LR P
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 257
Query: 333 --------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 258 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 317
Query: 378 DASEIPI 384
D + P+
Sbjct: 318 DPDDEPV 324
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 115/253 (45%), Gaps = 41/253 (16%)
Query: 139 AVEDVKREVKILQALAGHEN-VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTL 197
++ + E+ L L H + +++ Y+ D Y+Y+ ME C +L
Sbjct: 97 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDL------------- 142
Query: 198 TSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257
++W ++K + + ML H HG+VH D+KP NFL D LK
Sbjct: 143 -NSW---LKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLK 194
Query: 258 ATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLK-----RKSGPES-------DVWSIG 302
DFG+++ ++P VG+ Y+ PE +K R++G DVWS+G
Sbjct: 195 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 254
Query: 303 VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRAR 361
I Y + G+ PF + + I K P+ + +P I +D +K L +DP+ R
Sbjct: 255 CILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQR 312
Query: 362 LTAAQALSHPWVR 374
++ + L+HP+V+
Sbjct: 313 ISIPELLAHPYVQ 325
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 144/367 (39%), Gaps = 84/367 (22%)
Query: 53 HQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYT 112
QER Y+Q K + R Q + P G G +G
Sbjct: 9 SQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYGSV 45
Query: 113 YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF------ 166
A D G RVAVKK+ + + I + RE+++L+ + HENV+ + F
Sbjct: 46 CAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSL 103
Query: 167 EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRV 226
E+ N VY+ L G +L + I K + T+ ++ Q+LR
Sbjct: 104 EEFNDVYLVTHLM-GADLNN------------------IVKCQKLTDDHVQFLIYQILRG 144
Query: 227 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 286
H ++HRD+KP N + ED LK DFGL+ + V + +Y APE
Sbjct: 145 LKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPE 199
Query: 287 VLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP---------- 332
++ D+WS+G I LL GR F K +LR P
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 333 --------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 319
Query: 378 DASEIPI 384
D + P+
Sbjct: 320 DPDDEPV 326
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 115/253 (45%), Gaps = 41/253 (16%)
Query: 139 AVEDVKREVKILQALAGHEN-VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTL 197
++ + E+ L L H + +++ Y+ D Y+Y+ ME C +L
Sbjct: 69 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDL------------- 114
Query: 198 TSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257
++W ++K + + ML H HG+VH D+KP NFL D LK
Sbjct: 115 -NSW---LKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLK 166
Query: 258 ATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLK-----RKSGPES-------DVWSIG 302
DFG+++ ++P VG+ Y+ PE +K R++G DVWS+G
Sbjct: 167 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 226
Query: 303 VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRAR 361
I Y + G+ PF + + I K P+ + +P I +D +K L +DP+ R
Sbjct: 227 CILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQR 284
Query: 362 LTAAQALSHPWVR 374
++ + L+HP+V+
Sbjct: 285 ISIPELLAHPYVQ 297
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 37/290 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I K++G G F V K G A+K + K M+ V + E +L
Sbjct: 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVN-GDRR 121
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+ + + AF+D+NY+Y+ ME GG+LL TL S + R + A
Sbjct: 122 WITQLHFAFQDENYLYLVMEYYVGGDLL----------TLLSKF------GERIPAEMAR 165
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI- 276
+ +++ H G VHRD+KP+N L ++ DFG ++ + +
Sbjct: 166 FYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRC---GHIRLADFGSCLKLRADGTVRSLV 222
Query: 277 -VGSAYYVAPEVLK--------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327
VG+ Y++PE+L+ GPE D W++GV Y + G+ PF+ + + ++
Sbjct: 223 AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKI 282
Query: 328 LRNKPDFRRKPW--PSISNSAKDFVKKLLVKDPRARL---TAAQALSHPW 372
+ K + P + A+DF+++LL P RL A +HP+
Sbjct: 283 VHYK-EHLSLPLVDEGVPEEARDFIQRLLCP-PETRLGRGGAGDFRTHPF 330
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 115/253 (45%), Gaps = 41/253 (16%)
Query: 139 AVEDVKREVKILQALAGHEN-VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTL 197
++ + E+ L L H + +++ Y+ D Y+Y+ ME C +L
Sbjct: 50 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDL------------- 95
Query: 198 TSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257
++W ++K + + ML H HG+VH D+KP NFL D LK
Sbjct: 96 -NSW---LKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLK 147
Query: 258 ATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLK-----RKSGPES-------DVWSIG 302
DFG+++ ++P VG+ Y+ PE +K R++G DVWS+G
Sbjct: 148 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 207
Query: 303 VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRAR 361
I Y + G+ PF + + I K P+ + +P I +D +K L +DP+ R
Sbjct: 208 CILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQR 265
Query: 362 LTAAQALSHPWVR 374
++ + L+HP+V+
Sbjct: 266 ISIPELLAHPYVQ 278
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 115/253 (45%), Gaps = 41/253 (16%)
Query: 139 AVEDVKREVKILQALAGHEN-VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTL 197
++ + E+ L L H + +++ Y+ D Y+Y+ ME C +L
Sbjct: 97 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDL------------- 142
Query: 198 TSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257
++W ++K + + ML H HG+VH D+KP NFL D LK
Sbjct: 143 -NSW---LKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLK 194
Query: 258 ATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLK-----RKSGPES-------DVWSIG 302
DFG+++ ++P VG+ Y+ PE +K R++G DVWS+G
Sbjct: 195 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 254
Query: 303 VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRAR 361
I Y + G+ PF + + I K P+ + +P I +D +K L +DP+ R
Sbjct: 255 CILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQR 312
Query: 362 LTAAQALSHPWVR 374
++ + L+HP+V+
Sbjct: 313 ISIPELLAHPYVQ 325
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 124/297 (41%), Gaps = 31/297 (10%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G++LG G ++A D + VAVK + + P +RE + AL H
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NH 71
Query: 157 ENVVKFYNAFEDDNYV----YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
+V Y+ E + YI ME +G L D + + T
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD-----------------IVHTEGPMT 114
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-- 270
K A V+ + H +G++HRD+KP N + + +++K DFG++ I
Sbjct: 115 PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARAIADSGN 171
Query: 271 --KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327
+ ++G+A Y++PE + S SDV+S+G + Y +L G PF + + +
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH 231
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR-EGGDASEIP 383
+R P +S V K L K+P R A + VR G+ E P
Sbjct: 232 VREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 115/253 (45%), Gaps = 41/253 (16%)
Query: 139 AVEDVKREVKILQALAGHEN-VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTL 197
++ + E+ L L H + +++ Y+ D Y+Y+ ME C +L
Sbjct: 53 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDL------------- 98
Query: 198 TSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257
++W ++K + + ML H HG+VH D+KP NFL D LK
Sbjct: 99 -NSW---LKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLK 150
Query: 258 ATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLK-----RKSGPES-------DVWSIG 302
DFG+++ ++P VG+ Y+ PE +K R++G DVWS+G
Sbjct: 151 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 210
Query: 303 VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS-AKDFVKKLLVKDPRAR 361
I Y + G+ PF + + I K P+ + +P I +D +K L +DP+ R
Sbjct: 211 CILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQR 268
Query: 362 LTAAQALSHPWVR 374
++ + L+HP+V+
Sbjct: 269 ISIPELLAHPYVQ 281
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 115/253 (45%), Gaps = 41/253 (16%)
Query: 139 AVEDVKREVKILQALAGHEN-VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTL 197
++ + E+ L L H + +++ Y+ D Y+Y+ ME C +L
Sbjct: 97 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDL------------- 142
Query: 198 TSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257
++W ++K + + ML H HG+VH D+KP NFL D LK
Sbjct: 143 -NSW---LKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLK 194
Query: 258 ATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLK-----RKSGPES-------DVWSIG 302
DFG+++ ++P VG+ Y+ PE +K R++G DVWS+G
Sbjct: 195 LIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 254
Query: 303 VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRAR 361
I Y + G+ PF + + I K P+ + +P I +D +K L +DP+ R
Sbjct: 255 CILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQR 312
Query: 362 LTAAQALSHPWVR 374
++ + L+HP+V+
Sbjct: 313 ISIPELLAHPYVQ 325
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 141/318 (44%), Gaps = 42/318 (13%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G G Y ++ V
Sbjct: 20 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGSGSVYSGIRVSDNLPV 79
Query: 125 AVKKIEKNKMI----LPIAVEDVKREVKILQALA-GHENVVKFYNAFEDDNYVYIAMELC 179
A+K +EK+++ LP V EV +L+ ++ G V++ + FE + + +E
Sbjct: 80 AIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 138
Query: 180 EGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 239
E + L F I + E+ A Q+L CH G++HRD
Sbjct: 139 EPVQDL----------------FDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRD 182
Query: 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESD 297
+K EN L + LK DFG +K + D G+ Y PE ++ R G +
Sbjct: 183 IKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 239
Query: 298 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 357
VWS+G++ Y ++CG PF +E++R + FR++ +S+ + ++ L
Sbjct: 240 VWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR----VSSECQHLIRWCLALR 289
Query: 358 PRARLTAAQALSHPWVRE 375
P R T + +HPW+++
Sbjct: 290 PSDRPTFEEIQNHPWMQD 307
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 115/253 (45%), Gaps = 41/253 (16%)
Query: 139 AVEDVKREVKILQALAGHEN-VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTL 197
++ + E+ L L H + +++ Y+ D Y+Y+ ME C +L
Sbjct: 49 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDL------------- 94
Query: 198 TSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257
++W ++K + + ML H HG+VH D+KP NFL D LK
Sbjct: 95 -NSW---LKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLK 146
Query: 258 ATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLK-----RKSGPES-------DVWSIG 302
DFG+++ ++P VG+ Y+ PE +K R++G DVWS+G
Sbjct: 147 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 206
Query: 303 VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS-AKDFVKKLLVKDPRAR 361
I Y + G+ PF + + I K P+ + +P I +D +K L +DP+ R
Sbjct: 207 CILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQR 264
Query: 362 LTAAQALSHPWVR 374
++ + L+HP+V+
Sbjct: 265 ISIPELLAHPYVQ 277
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 132/315 (41%), Gaps = 61/315 (19%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G A D +VAVKK+ + L I RE+++L+ L HENV+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSL-IHARRTYRELRLLKHLK-HENVIGLL 93
Query: 164 NAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+ F ED + VY+ TTL A I K +++
Sbjct: 94 DVFTPATSIEDFSEVYLV-------------------TTLMGADLNNIVKCQALSDEHVQ 134
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+V Q+LR H G++HRD+KP N + EDS L+ DFGL+ + ++ V
Sbjct: 135 FLVYQLLRGLKYIHSAGIIHRDLKPSNV---AVNEDSELRILDFGLAR--QADEEMTGYV 189
Query: 278 GSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPF-------------------- 315
+ +Y APE++ D+WS+G I LL G+ F
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPS 249
Query: 316 ---WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK----DFVKKLLVKDPRARLTAAQAL 368
K + +++ P +K SI A D + ++LV D R++AA+AL
Sbjct: 250 PEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEAL 309
Query: 369 SHPWVREGGDASEIP 383
+H + + D + P
Sbjct: 310 AHAYFSQYHDPEDEP 324
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 116/263 (44%), Gaps = 56/263 (21%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
ILQ L G N+VK + D + ++ E ++ K++ TLT D
Sbjct: 80 ILQNLCGGPNIVKLLDIVRDQHSKTPSLIF----EYVNNTDFKVLYPTLTDY-------D 128
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
RY + ++L+ CH G++HRD+KP N + E L+ D+GL++F
Sbjct: 129 IRY-------YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYH 179
Query: 269 PGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIF 324
PGK++ V S Y+ PE+L + D+WS+G + ++ + PF+ D +
Sbjct: 180 PGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 239
Query: 325 K----------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKK 352
K V NK P RKPW N+ A DF+ K
Sbjct: 240 KIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDK 299
Query: 353 LLVKDPRARLTAAQALSHPWVRE 375
LL D + RLTA +A++HP+ ++
Sbjct: 300 LLRYDHQERLTALEAMTHPYFQQ 322
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 116/263 (44%), Gaps = 56/263 (21%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
ILQ L G N+VK + D + ++ E ++ K++ TLT D
Sbjct: 78 ILQNLCGGPNIVKLLDIVRDQHSKTPSLIF----EYVNNTDFKVLYPTLTDY-------D 126
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
RY + ++L+ CH G++HRD+KP N + E L+ D+GL++F
Sbjct: 127 IRY-------YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYH 177
Query: 269 PGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIF 324
PGK++ V S Y+ PE+L + D+WS+G + ++ + PF+ D +
Sbjct: 178 PGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 237
Query: 325 K----------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKK 352
K V NK P RKPW N+ A DF+ K
Sbjct: 238 KIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDK 297
Query: 353 LLVKDPRARLTAAQALSHPWVRE 375
LL D + RLTA +A++HP+ ++
Sbjct: 298 LLRYDHQERLTALEAMTHPYFQQ 320
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 116/263 (44%), Gaps = 56/263 (21%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
ILQ L G N+VK + D + ++ E ++ K++ TLT D
Sbjct: 79 ILQNLCGGPNIVKLLDIVRDQHSKTPSLIF----EYVNNTDFKVLYPTLTDY-------D 127
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
RY + ++L+ CH G++HRD+KP N + E L+ D+GL++F
Sbjct: 128 IRY-------YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYH 178
Query: 269 PGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIF 324
PGK++ V S Y+ PE+L + D+WS+G + ++ + PF+ D +
Sbjct: 179 PGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 238
Query: 325 K----------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKK 352
K V NK P RKPW N+ A DF+ K
Sbjct: 239 KIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDK 298
Query: 353 LLVKDPRARLTAAQALSHPWVRE 375
LL D + RLTA +A++HP+ ++
Sbjct: 299 LLRYDHQERLTALEAMTHPYFQQ 321
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 116/263 (44%), Gaps = 56/263 (21%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
ILQ L G N+VK + D + ++ E ++ K++ TLT D
Sbjct: 78 ILQNLCGGPNIVKLLDIVRDQHSKTPSLIF----EYVNNTDFKVLYPTLTDY-------D 126
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
RY + ++L+ CH G++HRD+KP N + E L+ D+GL++F
Sbjct: 127 IRY-------YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYH 177
Query: 269 PGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIF 324
PGK++ V S Y+ PE+L + D+WS+G + ++ + PF+ D +
Sbjct: 178 PGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 237
Query: 325 K----------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKK 352
K V NK P RKPW N+ A DF+ K
Sbjct: 238 KIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDK 297
Query: 353 LLVKDPRARLTAAQALSHPWVRE 375
LL D + RLTA +A++HP+ ++
Sbjct: 298 LLRYDHQERLTALEAMTHPYFQQ 320
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 37/276 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G FG Y D + VA+K I+ + +ED+++E+ +L + +++
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAED--EIEDIQQEITVLSQ-CDSPYITRYF 83
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
++ ++I ME GG LD + K E A ++R++
Sbjct: 84 GSYLKSTKLWIIMEYLGGGSALDLL------------------KPGPLEETYIATILREI 125
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYY 282
L+ H +HRD+K N L E +K DFG++ + + K VG+ ++
Sbjct: 126 LKGLDYLHSERKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFW 182
Query: 283 VAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 341
+APEV+K+ + ++D+WS+G+ L G P D + + +N P P+
Sbjct: 183 MAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP-------PT 235
Query: 342 I----SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
+ S K+FV+ L KDPR R TA + L H ++
Sbjct: 236 LEGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKFI 271
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 124/314 (39%), Gaps = 73/314 (23%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+G G FG + A + G +VA+KK+ E K PI RE+KILQ L HENVV
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT---ALREIKILQLLK-HENVVN 81
Query: 162 F----------YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
YN + +Y+ + CE LA ++S L ++
Sbjct: 82 LIEICRTKASPYNRCKGS--IYLVFDFCEHD------LAGLLSNVLV-----------KF 122
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
T + V++ +L H + ++HRDMK N L D LK DFGL+ K
Sbjct: 123 TLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAK 179
Query: 272 -----KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324
++ + V + +Y PE+L +R GP D+W G I + TE
Sbjct: 180 NSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL 239
Query: 325 KEVLRNKPDFRRKPWPSISN----------------------------SAKDFVKKLLVK 356
+ + + WP++ N A D + KLLV
Sbjct: 240 ALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVL 299
Query: 357 DPRARLTAAQALSH 370
DP R+ + AL+H
Sbjct: 300 DPAQRIDSDDALNH 313
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 116/263 (44%), Gaps = 56/263 (21%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
ILQ L G N+VK + D + ++ E ++ K++ TLT D
Sbjct: 78 ILQNLXGGPNIVKLLDIVRDQHSKTPSLIF----EYVNNTDFKVLYPTLTDY-------D 126
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
RY + ++L+ CH G++HRD+KP N + E L+ D+GL++F
Sbjct: 127 IRY-------YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYH 177
Query: 269 PGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIF 324
PGK++ V S Y+ PE+L + D+WS+G + ++ + PF+ D +
Sbjct: 178 PGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 237
Query: 325 K----------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKK 352
K V NK P RKPW N+ A DF+ K
Sbjct: 238 KIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDK 297
Query: 353 LLVKDPRARLTAAQALSHPWVRE 375
LL D + RLTA +A++HP+ ++
Sbjct: 298 LLRYDHQERLTALEAMTHPYFQQ 320
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 116/263 (44%), Gaps = 56/263 (21%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
ILQ L G N+VK + D + ++ E ++ K++ TLT D
Sbjct: 79 ILQNLXGGPNIVKLLDIVRDQHSKTPSLIF----EYVNNTDFKVLYPTLTDY-------D 127
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
RY + ++L+ CH G++HRD+KP N + E L+ D+GL++F
Sbjct: 128 IRY-------YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYH 178
Query: 269 PGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIF 324
PGK++ V S Y+ PE+L + D+WS+G + ++ + PF+ D +
Sbjct: 179 PGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 238
Query: 325 K----------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKK 352
K V NK P RKPW N+ A DF+ K
Sbjct: 239 KIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDK 298
Query: 353 LLVKDPRARLTAAQALSHPWVRE 375
LL D + RLTA +A++HP+ ++
Sbjct: 299 LLRYDHQERLTALEAMTHPYFQQ 321
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 35/252 (13%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 11 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRK-T 65
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N++ F + + I + CEG L + A ++++ K
Sbjct: 66 RHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHAS----------------ETKFEMK 108
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGK 271
+ RQ R H ++HRD+K N ED+++K DFGL+
Sbjct: 109 KLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLH---EDNTVKIGDFGLATVKSRWSGSH 165
Query: 272 KFQDIVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKE 326
+F+ + GS ++APEV++ + S P +SDV++ G++ Y L+ G+ P+ + D I +
Sbjct: 166 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 225
Query: 327 VLRN--KPDFRR 336
V R PD +
Sbjct: 226 VGRGSLSPDLSK 237
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 116/263 (44%), Gaps = 56/263 (21%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
ILQ L G N+VK + D + ++ E ++ K++ TLT D
Sbjct: 78 ILQNLMGGPNIVKLLDIVRDQHSKTPSLIF----EYVNNTDFKVLYPTLTDY-------D 126
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
RY + ++L+ CH G++HRD+KP N + E L+ D+GL++F
Sbjct: 127 IRY-------YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYH 177
Query: 269 PGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIF 324
PGK++ V S Y+ PE+L + D+WS+G + ++ + PF+ D +
Sbjct: 178 PGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 237
Query: 325 K----------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKK 352
K V NK P RKPW N+ A DF+ K
Sbjct: 238 KIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDK 297
Query: 353 LLVKDPRARLTAAQALSHPWVRE 375
LL D + RLTA +A++HP+ ++
Sbjct: 298 LLRYDHQERLTALEAMTHPYFQQ 320
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 116/263 (44%), Gaps = 56/263 (21%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
ILQ L G N+VK + D + ++ E ++ K++ TLT D
Sbjct: 78 ILQNLXGGPNIVKLLDIVRDQHSKTPSLIF----EYVNNTDFKVLYPTLTDY-------D 126
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
RY + ++L+ CH G++HRD+KP N + E L+ D+GL++F
Sbjct: 127 IRY-------YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYH 177
Query: 269 PGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIF 324
PGK++ V S Y+ PE+L + D+WS+G + ++ + PF+ D +
Sbjct: 178 PGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 237
Query: 325 K----------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKK 352
K V NK P RKPW N+ A DF+ K
Sbjct: 238 KIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDK 297
Query: 353 LLVKDPRARLTAAQALSHPWVRE 375
LL D + RLTA +A++HP+ ++
Sbjct: 298 LLRYDHQERLTALEAMTHPYFQQ 320
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 116/263 (44%), Gaps = 56/263 (21%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
ILQ L G N+VK + D + ++ E ++ K++ TLT D
Sbjct: 78 ILQNLXGGPNIVKLLDIVRDQHSKTPSLIF----EYVNNTDFKVLYPTLTDY-------D 126
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
RY + ++L+ CH G++HRD+KP N + E L+ D+GL++F
Sbjct: 127 IRY-------YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYH 177
Query: 269 PGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIF 324
PGK++ V S Y+ PE+L + D+WS+G + ++ + PF+ D +
Sbjct: 178 PGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 237
Query: 325 K----------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKK 352
K V NK P RKPW N+ A DF+ K
Sbjct: 238 KIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDK 297
Query: 353 LLVKDPRARLTAAQALSHPWVRE 375
LL D + RLTA +A++HP+ ++
Sbjct: 298 LLRYDHQERLTALEAMTHPYFQQ 320
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 124/314 (39%), Gaps = 73/314 (23%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+G G FG + A + G +VA+KK+ E K PI RE+KILQ L HENVV
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT---ALREIKILQLLK-HENVVN 80
Query: 162 F----------YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
YN + +Y+ + CE LA ++S L ++
Sbjct: 81 LIEICRTKASPYNRCKGS--IYLVFDFCEHD------LAGLLSNVLV-----------KF 121
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
T + V++ +L H + ++HRDMK N L D LK DFGL+ K
Sbjct: 122 TLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAK 178
Query: 272 -----KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324
++ + V + +Y PE+L +R GP D+W G I + TE
Sbjct: 179 NSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL 238
Query: 325 KEVLRNKPDFRRKPWPSISN----------------------------SAKDFVKKLLVK 356
+ + + WP++ N A D + KLLV
Sbjct: 239 ALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVL 298
Query: 357 DPRARLTAAQALSH 370
DP R+ + AL+H
Sbjct: 299 DPAQRIDSDDALNH 312
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 123/297 (41%), Gaps = 31/297 (10%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G++LG G ++A D VAVK + + P +RE + AL H
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NH 71
Query: 157 ENVVKFYNAFEDDNYV----YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
+V Y+ E + YI ME +G L D + + T
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD-----------------IVHTEGPMT 114
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-- 270
K A V+ + H +G++HRD+KP N + + +++K DFG++ I
Sbjct: 115 PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARAIADSGN 171
Query: 271 --KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327
+ ++G+A Y++PE + S SDV+S+G + Y +L G PF + + +
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH 231
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR-EGGDASEIP 383
+R P +S V K L K+P R A + VR G+ E P
Sbjct: 232 VREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 124/314 (39%), Gaps = 73/314 (23%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+G G FG + A + G +VA+KK+ E K PI RE+KILQ L HENVV
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT---ALREIKILQLLK-HENVVN 81
Query: 162 F----------YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
YN + +Y+ + CE LA ++S L ++
Sbjct: 82 LIEICRTKASPYNRCKGS--IYLVFDFCEHD------LAGLLSNVLV-----------KF 122
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
T + V++ +L H + ++HRDMK N L D LK DFGL+ K
Sbjct: 123 TLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAK 179
Query: 272 -----KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324
++ + V + +Y PE+L +R GP D+W G I + TE
Sbjct: 180 NSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL 239
Query: 325 KEVLRNKPDFRRKPWPSISN----------------------------SAKDFVKKLLVK 356
+ + + WP++ N A D + KLLV
Sbjct: 240 ALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVL 299
Query: 357 DPRARLTAAQALSH 370
DP R+ + AL+H
Sbjct: 300 DPAQRIDSDDALNH 313
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 123/282 (43%), Gaps = 38/282 (13%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
+LGHG G T V + VAVK+I LP REV++L+ H NV+++
Sbjct: 31 VLGHGAEG-TIVYRGMFDNRDVAVKRI------LPECFSFADREVQLLRESDEHPNVIRY 83
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
+ +D + YIA+ELC + TL +KD + + +++Q
Sbjct: 84 FCTEKDRQFQYIAIELC--------------AATLQE---YVEQKDFAHLGLEPITLLQQ 126
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA--TDFGLSDFIKPGK----KFQDI 276
A H +VHRD+KP N L +KA +DFGL + G+ + +
Sbjct: 127 TTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186
Query: 277 VGSAYYVAPEVLKR--KSGPES--DVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 331
G+ ++APE+L K P D++S G + Y ++ G PF + +L
Sbjct: 187 PGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ--ANILLGA 244
Query: 332 PDFR-RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
P A++ ++K++ DP+ R +A L HP+
Sbjct: 245 CSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPF 286
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 131/315 (41%), Gaps = 61/315 (19%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G A D +VAVKK+ + L I RE+++L+ L HENV+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSL-IHARRTYRELRLLKHLK-HENVIGLL 85
Query: 164 NAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+ F ED + VY+ TTL A I K +++
Sbjct: 86 DVFTPATSIEDFSEVYLV-------------------TTLMGADLNNIVKCQALSDEHVQ 126
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+V Q+LR H G++HRD+KP N + ED L+ DFGL+ + ++ V
Sbjct: 127 FLVYQLLRGLKYIHSAGIIHRDLKPSNV---AVNEDCELRILDFGLAR--QADEEMTGYV 181
Query: 278 GSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPF-------------------- 315
+ +Y APE++ D+WS+G I LL G+ F
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPS 241
Query: 316 ---WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK----DFVKKLLVKDPRARLTAAQAL 368
K + +++ P +K SI A D + ++LV D R++AA+AL
Sbjct: 242 PEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEAL 301
Query: 369 SHPWVREGGDASEIP 383
+H + + D + P
Sbjct: 302 AHAYFSQYHDPEDEP 316
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 127/283 (44%), Gaps = 29/283 (10%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D + +T + +G G FG + D VA+K I+ + +ED+++E+ +L
Sbjct: 19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQ 76
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
V K+Y ++ D ++I ME GG LD + +
Sbjct: 77 -CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD------------------LLEPGPLD 117
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 271
E A ++R++L+ H +HRD+K N L E +K DFG++ + +
Sbjct: 118 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQI 174
Query: 272 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330
K VG+ +++APEV+K+ + ++D+WS+G+ L G P + + + +N
Sbjct: 175 KRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN 234
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
P + S K+FV+ L K+P R TA + L H ++
Sbjct: 235 NPPTLEG---NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 274
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 124/314 (39%), Gaps = 73/314 (23%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+G G FG + A + G +VA+KK+ E K PI RE+KILQ L HENVV
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT---ALREIKILQLLK-HENVVN 81
Query: 162 F----------YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
YN + +Y+ + CE LA ++S L ++
Sbjct: 82 LIEICRTKASPYNRCKAS--IYLVFDFCEHD------LAGLLSNVLV-----------KF 122
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
T + V++ +L H + ++HRDMK N L D LK DFGL+ K
Sbjct: 123 TLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAK 179
Query: 272 -----KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324
++ + V + +Y PE+L +R GP D+W G I + TE
Sbjct: 180 NSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL 239
Query: 325 KEVLRNKPDFRRKPWPSISN----------------------------SAKDFVKKLLVK 356
+ + + WP++ N A D + KLLV
Sbjct: 240 ALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVL 299
Query: 357 DPRARLTAAQALSH 370
DP R+ + AL+H
Sbjct: 300 DPAQRIDSDDALNH 313
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 56/263 (21%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
ILQ L G N+VK + D + ++ E ++ K++ TLT D
Sbjct: 99 ILQNLXGGPNIVKLLDIVRDQHSKTPSLIF----EYVNNTDFKVLYPTLTDY-------D 147
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
RY + ++L+ CH G++HRD+KP N + E L+ D+GL++F
Sbjct: 148 IRY-------YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYH 198
Query: 269 PGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW---------- 316
PGK++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 199 PGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 258
Query: 317 --------DKTEDGIFKEVLRNKPDFR-------RKPWPSISNS---------AKDFVKK 352
D + K + P RKPW N+ A DF+ K
Sbjct: 259 KIAKVLGTDGLNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDK 318
Query: 353 LLVKDPRARLTAAQALSHPWVRE 375
LL D + RLTA +A++HP+ ++
Sbjct: 319 LLRYDHQERLTALEAMTHPYFQQ 341
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 35/252 (13%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 23 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRKTR 78
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N++ F + + I + CEG L + A ++++ K
Sbjct: 79 -HVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHAS----------------ETKFEMK 120
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGK 271
+ RQ R H ++HRD+K N ED+++K DFGL+
Sbjct: 121 KLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLH---EDNTVKIGDFGLATEKSRWSGSH 177
Query: 272 KFQDIVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKE 326
+F+ + GS ++APEV++ + S P +SDV++ G++ Y L+ G+ P+ + D I +
Sbjct: 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 237
Query: 327 VLRN--KPDFRR 336
V R PD +
Sbjct: 238 VGRGSLSPDLSK 249
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 127/283 (44%), Gaps = 29/283 (10%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D + +T + +G G FG + D VA+K I+ + +ED+++E+ +L
Sbjct: 4 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED--EIEDIQQEITVLSQ 61
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
V K+Y ++ D ++I ME GG LD + +
Sbjct: 62 -CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD------------------LLEPGPLD 102
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 271
E A ++R++L+ H +HRD+K N L E +K DFG++ + +
Sbjct: 103 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQI 159
Query: 272 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330
K VG+ +++APEV+K+ + ++D+WS+G+ L G P + + + +N
Sbjct: 160 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN 219
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
P + S K+FV+ L K+P R TA + L H ++
Sbjct: 220 NPPTLEGNY---SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 127/283 (44%), Gaps = 29/283 (10%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D + +T + +G G FG + D VA+K I+ + +ED+++E+ +L
Sbjct: 4 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQ 61
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
V K+Y ++ D ++I ME GG LD + +
Sbjct: 62 -CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD------------------LLEPGPLD 102
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 271
E A ++R++L+ H +HRD+K N L E +K DFG++ + +
Sbjct: 103 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQI 159
Query: 272 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330
K VG+ +++APEV+K+ + ++D+WS+G+ L G P + + + +N
Sbjct: 160 KRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN 219
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
P + S K+FV+ L K+P R TA + L H ++
Sbjct: 220 NPPTLEGNY---SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 127/283 (44%), Gaps = 29/283 (10%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D + +T + +G G FG + D VA+K I+ + +ED+++E+ +L
Sbjct: 24 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQ 81
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
V K+Y ++ D ++I ME GG LD + +
Sbjct: 82 -CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD------------------LLEPGPLD 122
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 271
E A ++R++L+ H +HRD+K N L E +K DFG++ + +
Sbjct: 123 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQI 179
Query: 272 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330
K VG+ +++APEV+K+ + ++D+WS+G+ L G P + + + +N
Sbjct: 180 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN 239
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
P + S K+FV+ L K+P R TA + L H ++
Sbjct: 240 NPPTLEGNY---SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 279
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 35/252 (13%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 23 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRKTR 78
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N++ F + + I + CEG L + A ++++ K
Sbjct: 79 -HVNILLFM-GYSTAPQLAIVTQWCEGSSLYHHLHAS----------------ETKFEMK 120
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGK 271
+ RQ R H ++HRD+K N ED+++K DFGL+
Sbjct: 121 KLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLH---EDNTVKIGDFGLATEKSRWSGSH 177
Query: 272 KFQDIVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKE 326
+F+ + GS ++APEV++ + S P +SDV++ G++ Y L+ G+ P+ + D I +
Sbjct: 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 237
Query: 327 VLRN--KPDFRR 336
V R PD +
Sbjct: 238 VGRGSLSPDLSK 249
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 122/297 (41%), Gaps = 31/297 (10%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G++LG G ++A D VAVK + + P +RE + AL H
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NH 71
Query: 157 ENVVKFYNAFEDDNYV----YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
+V Y E + YI ME +G L D + + T
Sbjct: 72 PAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRD-----------------IVHTEGPMT 114
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-- 270
K A V+ + H +G++HRD+KP N + + +++K DFG++ I
Sbjct: 115 PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARAIADSGN 171
Query: 271 --KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327
+ ++G+A Y++PE + S SDV+S+G + Y +L G PF + + +
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH 231
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR-EGGDASEIP 383
+R P +S V K L K+P R A + VR G+ E P
Sbjct: 232 VREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 131/303 (43%), Gaps = 61/303 (20%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+G G +G + A ++ + VA+K++ + + +P RE+ +L+ L H+N+V+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVP---SSALREICLLKELK-HKNIVR 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVV-- 219
++ D + + E C D+ L K DS + D +V
Sbjct: 66 LHDVLHSDKKLTLVFEFC------DQDLKKYF--------------DSCNGDLDPEIVKS 105
Query: 220 -VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIV 277
+ Q+L+ CH ++HRD+KP+N L E LK DFGL+ F P + + V
Sbjct: 106 FLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGE---LKLADFGLARAFGIPVRCYSAEV 162
Query: 278 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLR----- 329
+ +Y P+VL + D+WS G I L RP + + D K + R
Sbjct: 163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTP 222
Query: 330 ---------NKPDFRRKPW-----------PSISNSAKDFVKKLLVKDPRARLTAAQALS 369
PD++ P P ++ + +D ++ LL +P R++A +AL
Sbjct: 223 TEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282
Query: 370 HPW 372
HP+
Sbjct: 283 HPY 285
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 125/306 (40%), Gaps = 32/306 (10%)
Query: 78 GVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP 137
G++P G + RY +G++LG G ++A D VAVK + + P
Sbjct: 13 GLVPRG--SHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDP 70
Query: 138 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV----YIAMELCEGGELLDRILAKMI 193
+RE + AL H +V Y+ E + YI ME +G L D
Sbjct: 71 SFYLRFRREAQNAAAL-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD------- 122
Query: 194 STTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253
+ + T K A V+ + H +G++HRD+KP N + +
Sbjct: 123 ----------IVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT--- 169
Query: 254 SSLKATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 308
+++K DFG++ I + ++G+A Y++PE + S SDV+S+G + Y +
Sbjct: 170 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 229
Query: 309 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368
L G PF + + + +R P +S V K L K+P R A +
Sbjct: 230 LTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 289
Query: 369 SHPWVR 374
VR
Sbjct: 290 RADLVR 295
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 126/306 (41%), Gaps = 66/306 (21%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
+LG G FG A + + A+KKI + L + +V +L A H+ VV++
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEV-----MLLASLNHQYVVRY 67
Query: 163 YNAF-EDDNYV------------YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
Y A+ E N+V +I ME CE G L D I ++ ++ W L
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL------ 121
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS----- 264
RQ+L + H G++HRD+KP N E ++K DFGL+
Sbjct: 122 ----------FRQILEALSYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHR 168
Query: 265 --DFIK------PGK--KFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGR 312
D +K PG +G+A YVA EVL + D++S+G+I + ++
Sbjct: 169 SLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY-- 226
Query: 313 RPFWDKTEDGIFKEVLRN-----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 367
PF E + LR+ PDF K ++ L+ DP R A
Sbjct: 227 -PFSTGMERVNILKKLRSVSIEFPPDFDDNKM----KVEKKIIRLLIDHDPNKRPGARTL 281
Query: 368 LSHPWV 373
L+ W+
Sbjct: 282 LNSGWL 287
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 125/276 (45%), Gaps = 37/276 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G FG + D VA+K I+ + +ED+++E+ +L V K+Y
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAED--EIEDIQQEITVLSQ-CDSSYVTKYY 87
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
++ + ++I ME GG LD + A + E A +++++
Sbjct: 88 GSYLKGSKLWIIMEYLGGGSALDLLRA------------------GPFDEFQIATMLKEI 129
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYY 282
L+ H +HRD+K N L E +K DFG++ + + K VG+ ++
Sbjct: 130 LKGLDYLHSEKKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFW 186
Query: 283 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 341
+APEV+++ + ++D+WS+G+ L G P D + + +N P P+
Sbjct: 187 MAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP-------PT 239
Query: 342 I----SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
+ + S K+F+ L KDP R TA + L H ++
Sbjct: 240 LVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFI 275
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 131/303 (43%), Gaps = 61/303 (20%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+G G +G + A ++ + VA+K++ + + +P RE+ +L+ L H+N+V+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVP---SSALREICLLKELK-HKNIVR 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVV-- 219
++ D + + E C D+ L K DS + D +V
Sbjct: 66 LHDVLHSDKKLTLVFEFC------DQDLKKYF--------------DSCNGDLDPEIVKS 105
Query: 220 -VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIV 277
+ Q+L+ CH ++HRD+KP+N L E LK +FGL+ F P + + V
Sbjct: 106 FLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGE---LKLANFGLARAFGIPVRCYSAEV 162
Query: 278 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLR----- 329
+ +Y P+VL + D+WS G I L RP + + D K + R
Sbjct: 163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP 222
Query: 330 ---------NKPDFRRKPW-----------PSISNSAKDFVKKLLVKDPRARLTAAQALS 369
PD++ P P ++ + +D ++ LL +P R++A +AL
Sbjct: 223 TEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282
Query: 370 HPW 372
HP+
Sbjct: 283 HPY 285
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 24/219 (10%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF- 162
LG G FGY + G++VA+K+ + + P E E++I++ L H NVV
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKL-NHPNVVSAR 78
Query: 163 -----YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
++ +AME CEGG+L + L R D +
Sbjct: 79 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG-------PIRTLLSDIS 131
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+R + H + ++HRD+KPEN + + + K D G + + G+ + V
Sbjct: 132 SALRYL-------HENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV 184
Query: 278 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF 315
G+ Y+APE+L++K + D WS G + + + G RPF
Sbjct: 185 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 24/219 (10%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF- 162
LG G FGY + G++VA+K+ + + P E E++I++ L H NVV
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKL-NHPNVVSAR 79
Query: 163 -----YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
++ +AME CEGG+L + L R D +
Sbjct: 80 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG-------PIRTLLSDIS 132
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+R + H + ++HRD+KPEN + + + K D G + + G+ + V
Sbjct: 133 SALRYL-------HENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV 185
Query: 278 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF 315
G+ Y+APE+L++K + D WS G + + + G RPF
Sbjct: 186 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 136/314 (43%), Gaps = 54/314 (17%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDR-VAVKKI--EKNKMILPIAVEDVKREVKILQ 151
D++Y +G G +G + A D NG R VA+K++ + + +P++ REV +L+
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLST---IREVAVLR 66
Query: 152 ALAG--HENVVKFYNAF---EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
L H NVV+ ++ D + + E +D+ L +
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVF----EHVDQDLTTYLDKVPEPGVPTETI 122
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
KD + Q+LR H H +VHRD+KP+N L S+ + +K DFGL+
Sbjct: 123 KDMMF----------QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARI 169
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED---- 321
+V + +Y APEVL + S D+WS+G I + + R+P + + D
Sbjct: 170 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI-FAEMFRRKPLFRGSSDVDQL 228
Query: 322 GIFKEV--LRNKPDFRR------------------KPWPSISNSAKDFVKKLLVKDPRAR 361
G +V L + D+ R K I KD + K L +P R
Sbjct: 229 GKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 288
Query: 362 LTAAQALSHPWVRE 375
++A ALSHP+ ++
Sbjct: 289 ISAYSALSHPYFQD 302
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 138/328 (42%), Gaps = 69/328 (21%)
Query: 72 NSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI-- 129
+S +QTG + G + Y + + +G++ G G G + + G +AVK++
Sbjct: 5 SSGKQTGYLTIGGQR---YQAEINDLENLGEM-GSGTCGQVWKMRFRKTGHVIAVKQMRR 60
Query: 130 ----EKNKMILPIAVEDVKREVKILQALAGHEN--VVKFYNAFEDDNYVYIAMEL---CE 180
E+NK IL + + L H+ +V+ + F + V+IAMEL C
Sbjct: 61 SGNKEENKRIL----------MDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCA 110
Query: 181 -------GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH 233
G + +RIL KM + + ++L + H
Sbjct: 111 EKLKKRMQGPIPERILGKMTVAIVKALYYLKEK--------------------------H 144
Query: 234 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL----- 288
G++HRD+KP N L E +K DFG+S + K G A Y+APE +
Sbjct: 145 GVIHRDVKPSNILL---DERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDP 201
Query: 289 -KRKSGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSA 346
K +DVWS+G+ L G+ P+ + KT+ + +VL+ +P S
Sbjct: 202 TKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHM-GFSGDF 260
Query: 347 KDFVKKLLVKDPRARLTAAQALSHPWVR 374
+ FVK L KD R R + L H +++
Sbjct: 261 QSFVKDCLTKDHRKRPKYNKLLEHSFIK 288
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 136/314 (43%), Gaps = 54/314 (17%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDR-VAVKKI--EKNKMILPIAVEDVKREVKILQ 151
D++Y +G G +G + A D NG R VA+K++ + + +P++ REV +L+
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLST---IREVAVLR 66
Query: 152 ALAG--HENVVKFYNAF---EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
L H NVV+ ++ D + + E +D+ L +
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVF----EHVDQDLTTYLDKVPEPGVPTETI 122
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
KD + Q+LR H H +VHRD+KP+N L S+ + +K DFGL+
Sbjct: 123 KDMMF----------QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARI 169
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED---- 321
+V + +Y APEVL + S D+WS+G I + + R+P + + D
Sbjct: 170 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI-FAEMFRRKPLFRGSSDVDQL 228
Query: 322 GIFKEV--LRNKPDFRR------------------KPWPSISNSAKDFVKKLLVKDPRAR 361
G +V L + D+ R K I KD + K L +P R
Sbjct: 229 GKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 288
Query: 362 LTAAQALSHPWVRE 375
++A ALSHP+ ++
Sbjct: 289 ISAYSALSHPYFQD 302
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 138/311 (44%), Gaps = 62/311 (19%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + + LG G++ + A + N ++VAVK ++ K + +KRE+KIL+ L G
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKK------KKIKREIKILENLRGGP 92
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N++ + +D ++ E ++ K + TL T+ D
Sbjct: 93 NIITLADIVKDP----VSRTPALVFEHVNNTDFKQLYQTL--------------TDYDIR 134
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++L+ CH G++HRD+KP N L E L+ D+GL++F PG+++ V
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVLID--HEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 278 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------------D 317
S Y+ PE+L + D+WS+G + ++ + PF+ +
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 318 KTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLVKDPRAR 361
D I K + P F RK W +S A DF+ KLL D ++R
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
Query: 362 LTAAQALSHPW 372
LTA +A+ HP+
Sbjct: 313 LTAREAMEHPY 323
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 113/253 (44%), Gaps = 65/253 (25%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALAGHEN 158
+ LG G FG + A +K + A+K+I LP +A E V REVK L L H
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIR-----LPNRELAREKVMREVKALAKLE-HPG 64
Query: 159 VVKFYNAFEDDN------------YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
+V+++NA+ + N Y+YI M+LC L D W
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKD--------------WM---- 106
Query: 207 KDSRYT--EKDAAVVVRQMLRVAAEC---HLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261
+ R T E++ +V + L++A H GL+HRD+KP N F D +K DF
Sbjct: 107 -NGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTM---DDVVKVGDF 162
Query: 262 GLSDFIKPGKKFQDI-------------VGSAYYVAPEVLKRKS-GPESDVWSIGVITYI 307
GL + ++ Q + VG+ Y++PE + S + D++S+G+I +
Sbjct: 163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE 222
Query: 308 LLCGRRPFWDKTE 320
LL PF + E
Sbjct: 223 LL---YPFSTQME 232
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 134/311 (43%), Gaps = 54/311 (17%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDR-VAVKKI--EKNKMILPIAVEDVKREVKILQ 151
D++Y +G G +G + A D NG R VA+K++ + + +P++ REV +L+
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLST---IREVAVLR 66
Query: 152 ALAG--HENVVKFYNAF---EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
L H NVV+ ++ D + + E +D+ L +
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVF----EHVDQDLTTYLDKVPEPGVPTETI 122
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
KD + Q+LR H H +VHRD+KP+N L S+ + +K DFGL+
Sbjct: 123 KDMMF----------QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARI 169
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED---- 321
+V + +Y APEVL + S D+WS+G I + + R+P + + D
Sbjct: 170 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI-FAEMFRRKPLFRGSSDVDQL 228
Query: 322 GIFKEV--LRNKPDFRR------------------KPWPSISNSAKDFVKKLLVKDPRAR 361
G +V L + D+ R K I KD + K L +P R
Sbjct: 229 GKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 288
Query: 362 LTAAQALSHPW 372
++A ALSHP+
Sbjct: 289 ISAYSALSHPY 299
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 125/306 (40%), Gaps = 56/306 (18%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
LG G + Y K + VA+K+I E + A+ REV +L+ L H N+V
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAI----REVSLLKDLK-HANIVT 64
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
++ + + + E LD+ L + + + + + +
Sbjct: 65 LHDIIHTEKSLTLVFEY------LDKDLKQYLDDC-----------GNIINMHNVKLFLF 107
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSA 280
Q+LR A CH ++HRD+KP+N L E LK DFGL+ P K + + V +
Sbjct: 108 QLLRGLAYCHRQKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPTKTYDNEVVTL 164
Query: 281 YYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------- 329
+Y P++L + + D+W +G I Y + GR F T + + R
Sbjct: 165 WYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEET 224
Query: 330 -------------NKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
N P +R + P + + D + KLL + R R++A A+ HP+
Sbjct: 225 WPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPF 284
Query: 373 VREGGD 378
G+
Sbjct: 285 FLSLGE 290
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ + +LG G + K GD A+K + P+ V+ RE ++L+ L H+
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKL-NHK 67
Query: 158 NVVKFYNAFEDDN---YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
N+VK + A E++ + + ME C G L + + L + FL + +D
Sbjct: 68 NIVKLF-AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDV----- 121
Query: 215 DAAVVVRQMLRVAAECHL--HGLVHRDMKPENFLFKSAKEDSSL-KATDFGLSDFIKPGK 271
V HL +G+VHR++KP N + ++ S+ K TDFG + ++ +
Sbjct: 122 -----------VGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE 170
Query: 272 KFQDIVGSAYYVAPEVLKR---------KSGPESDVWSIGVITYILLCGRRPF 315
+F + G+ Y+ P++ +R K G D+WSIGV Y G PF
Sbjct: 171 QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 125/306 (40%), Gaps = 66/306 (21%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
+LG G FG A + + A+KKI + L + +V +L A H+ VV++
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEV-----MLLASLNHQYVVRY 67
Query: 163 YNAF-EDDNYV------------YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
Y A+ E N+V +I ME CE L D I ++ ++ W L
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL------ 121
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS----- 264
RQ+L + H G++HRD+KP N E ++K DFGL+
Sbjct: 122 ----------FRQILEALSYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHR 168
Query: 265 --DFIK------PGK--KFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGR 312
D +K PG +G+A YVA EVL + D++S+G+I + ++
Sbjct: 169 SLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY-- 226
Query: 313 RPFWDKTEDGIFKEVLRN-----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 367
PF E + LR+ PDF K ++ L+ DP R A
Sbjct: 227 -PFSTGMERVNILKKLRSVSIEFPPDFDDNKM----KVEKKIIRLLIDHDPNKRPGARTL 281
Query: 368 LSHPWV 373
L+ W+
Sbjct: 282 LNSGWL 287
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 141/339 (41%), Gaps = 71/339 (20%)
Query: 90 YDKDFDR--RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
+D FD Y I + +G+G +G A + G +VA+KKI N + + RE+
Sbjct: 46 FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKI-PNAFDVVTNAKRTLREL 104
Query: 148 KILQALAGHENVVKF---------YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLT 198
KIL+ H+N++ Y F+ VY+ ++L E L +I+ TL
Sbjct: 105 KILKHFK-HDNIIAIKDILRPTVPYGEFKS---VYVVLDLMESD--LHQIIHSSQPLTLE 158
Query: 199 SAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 258
+ + Q+LR H ++HRD+KP N L E+ LK
Sbjct: 159 HVRYF----------------LYQLLRGLKYMHSAQVIHRDLKPSNLL---VNENCELKI 199
Query: 259 TDFGLSDFI--KPGKK---FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCG 311
DFG++ + P + + V + +Y APE++ + D+WS+G I +L
Sbjct: 200 GDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLAR 259
Query: 312 RRPFWDKT---------------EDGIFKEV--------LRNKPDFRRKPW----PSISN 344
R+ F K + + V +++ P + PW P
Sbjct: 260 RQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADR 319
Query: 345 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 383
A + ++L +P AR++AA AL HP++ + D + P
Sbjct: 320 QALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEP 358
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ + +LG G + K GD A+K + P+ V+ RE ++L+ L H+
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKL-NHK 67
Query: 158 NVVKFYNAFEDDN---YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
N+VK + A E++ + + ME C G L + + L + FL + +D
Sbjct: 68 NIVKLF-AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDV----- 121
Query: 215 DAAVVVRQMLRVAAECHL--HGLVHRDMKPENFLFKSAKEDSSL-KATDFGLSDFIKPGK 271
V HL +G+VHR++KP N + ++ S+ K TDFG + ++ +
Sbjct: 122 -----------VGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE 170
Query: 272 KFQDIVGSAYYVAPEVLKR---------KSGPESDVWSIGVITYILLCGRRPF 315
+F + G+ Y+ P++ +R K G D+WSIGV Y G PF
Sbjct: 171 QFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 143/339 (42%), Gaps = 71/339 (20%)
Query: 90 YDKDFDR--RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
+D FD Y I + +G+G +G A + G +VA+KKI N + + RE+
Sbjct: 47 FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKI-PNAFDVVTNAKRTLREL 105
Query: 148 KILQALAGHENVVKF---------YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLT 198
KIL+ H+N++ Y F+ VY+ ++L E L +I+ TL
Sbjct: 106 KILKHFK-HDNIIAIKDILRPTVPYGEFKS---VYVVLDLMESD--LHQIIHSSQPLTL- 158
Query: 199 SAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 258
+ RY + Q+LR H ++HRD+KP N L E+ LK
Sbjct: 159 --------EHVRY-------FLYQLLRGLKYMHSAQVIHRDLKPSNLL---VNENCELKI 200
Query: 259 TDFGLSDFI--KPGKK---FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCG 311
DFG++ + P + + V + +Y APE++ + D+WS+G I +L
Sbjct: 201 GDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLAR 260
Query: 312 RRPFWDKT---------------EDGIFKEV--------LRNKPDFRRKPW----PSISN 344
R+ F K + + V +++ P + PW P
Sbjct: 261 RQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADR 320
Query: 345 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 383
A + ++L +P AR++AA AL HP++ + D + P
Sbjct: 321 QALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEP 359
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + DG
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGDGT 362
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 529
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + G K +
Sbjct: 363 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 417
Query: 530 ---IDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 418 DEEVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 86/152 (56%), Gaps = 12/152 (7%)
Query: 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 468
L L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 358
Query: 469 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGLK 527
DG +DF EF+ T+ +++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 359 GDGTIDFPEFL--TMMARKMKYTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLG 413
Query: 528 G-----SIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 414 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 103/225 (45%), Gaps = 28/225 (12%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNK-MILPIAVEDVKREVKILQALAGHE 157
T+ +++G G FG Y A GD VAVK + + +E+V++E K+ A+ H
Sbjct: 10 TLEEIIGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVRQEAKLF-AMLKHP 66
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILA-KMISTTLTSAWFLAIRKDSRYTEKDA 216
N++ + + + ME GG L +R+L+ K I + W + I + Y +A
Sbjct: 67 NIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDILVNWAVQIARGMNYLHDEA 125
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL-----KATDFGLSDFIKPGK 271
V + +HRD+K N L E+ L K TDFGL+
Sbjct: 126 IVPI---------------IHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT 170
Query: 272 KFQDIVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPF 315
K G+ ++APEV++ + SDVWS GV+ + LL G PF
Sbjct: 171 KMSA-AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 73.2 bits (178), Expect = 4e-13, Method: Composition-based stats.
Identities = 46/154 (29%), Positives = 88/154 (57%), Gaps = 12/154 (7%)
Query: 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 468
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 469 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 526
+G +DF EF+ T+ ++++ DSE+ + AF FD D +GFI+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGFISAAELRHVMTNLG 114
Query: 527 ----KGSIDPLLEEADIDKDGRISLSEFRRLLRT 556
+D ++ EADID DG+++ EF ++ T
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTT 148
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 86/152 (56%), Gaps = 12/152 (7%)
Query: 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 468
L L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 358
Query: 469 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGLK 527
DG +DF EF+ T+ +++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 359 GDGTIDFPEFL--TMMARKMKYTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLG 413
Query: 528 G-----SIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 414 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 121/282 (42%), Gaps = 30/282 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G FG +A G A KK+EK ++ E +IL+ + VV
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVS 248
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
A+E + + + + L GG+L + + + + E A
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDL---------------KFHIYHMGQAGFPEARAVFYAA 293
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
++ + H +V+RD+KPEN L + ++ +D GL+ + G+ + VG+
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLD---DHGHIRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APEV+K + S D W++G + Y ++ G+ PF + + +EV R + +
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSE 410
Query: 341 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
S A+ +LL KDP RL GG A E+
Sbjct: 411 RFSPQARSLCSQLLCKDPAERLGC----------RGGSAREV 442
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 121/282 (42%), Gaps = 30/282 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G FG +A G A KK+EK ++ E +IL+ + VV
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVS 248
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
A+E + + + + L GG+L + + + + E A
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDL---------------KFHIYHMGQAGFPEARAVFYAA 293
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
++ + H +V+RD+KPEN L + ++ +D GL+ + G+ + VG+
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLD---DHGHIRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APEV+K + S D W++G + Y ++ G+ PF + + +EV R + +
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSE 410
Query: 341 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
S A+ +LL KDP RL GG A E+
Sbjct: 411 RFSPQARSLCSQLLCKDPAERLGC----------RGGSAREV 442
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 72.8 bits (177), Expect = 5e-13, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 89/153 (58%), Gaps = 12/153 (7%)
Query: 408 ALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDC 467
A+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D
Sbjct: 3 AMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDA 61
Query: 468 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL 526
+ +G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 62 DGNGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNL 116
Query: 527 -----KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 117 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 149
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 121/267 (45%), Gaps = 27/267 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G FG + KA G A KK+ K ++ + E KIL A +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL-AKVHSRFIVS 249
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
AFE + + M + GG++ I + + + E A
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHI-------------YNVDEDNPGFQEPRAIFYTA 296
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSA 280
Q++ H +++RD+KPEN L +D +++ +D GL+ +K G+ K + G+
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 281 YYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF---WDKTEDGIFKE-VLRNKPDFR 335
++APE+L + S D +++GV Y ++ R PF +K E+ K+ VL +
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP 413
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARL 362
K S ++KDF + LL KDP RL
Sbjct: 414 DK----FSPASKDFCEALLQKDPEKRL 436
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 121/267 (45%), Gaps = 27/267 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G FG + KA G A KK+ K ++ + E KIL A +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL-AKVHSRFIVS 249
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
AFE + + M + GG++ I + + + E A
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHI-------------YNVDEDNPGFQEPRAIFYTA 296
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSA 280
Q++ H +++RD+KPEN L +D +++ +D GL+ +K G+ K + G+
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 281 YYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF---WDKTEDGIFKE-VLRNKPDFR 335
++APE+L + S D +++GV Y ++ R PF +K E+ K+ VL +
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP 413
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARL 362
K S ++KDF + LL KDP RL
Sbjct: 414 DK----FSPASKDFCEALLQKDPEKRL 436
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 121/267 (45%), Gaps = 27/267 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G FG + KA G A KK+ K ++ + E KIL A +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL-AKVHSRFIVS 249
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
AFE + + M + GG++ I + + + E A
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHI-------------YNVDEDNPGFQEPRAIFYTA 296
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSA 280
Q++ H +++RD+KPEN L +D +++ +D GL+ +K G+ K + G+
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 281 YYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF---WDKTEDGIFKE-VLRNKPDFR 335
++APE+L + S D +++GV Y ++ R PF +K E+ K+ VL +
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP 413
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARL 362
K S ++KDF + LL KDP RL
Sbjct: 414 DK----FSPASKDFCEALLQKDPEKRL 436
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 129/322 (40%), Gaps = 76/322 (23%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQ 151
DR I KL G G +G Y A D + VA+K+I E + +P REV +L+
Sbjct: 33 IDRYRRITKL-GEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVP---GTAIREVSLLK 88
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
L H N+++ + ++ +++ E E +Y
Sbjct: 89 ELQ-HRNIIELKSVIHHNHRLHLIFEYAENDL-------------------------KKY 122
Query: 212 TEKDAAVVVR-------QMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDSSLKATDFG 262
+K+ V +R Q++ CH +HRD+KP+N L A E LK DFG
Sbjct: 123 MDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFG 182
Query: 263 LS-DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKT 319
L+ F P ++F + + +Y PE+L R D+WSI I +L F +
Sbjct: 183 LARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS 242
Query: 320 E-DGIFK--EVLRNKPDFRRKPWPSIS------NSAKDFVKK------------------ 352
E D +FK EVL PD WP ++ S F K
Sbjct: 243 EIDQLFKIFEVL-GLPD--DTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLL 299
Query: 353 --LLVKDPRARLTAAQALSHPW 372
+L DP R++A AL HP+
Sbjct: 300 TAMLEMDPVKRISAKNALEHPY 321
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 121/267 (45%), Gaps = 27/267 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G FG + KA G A KK+ K ++ + E KIL A +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL-AKVHSRFIVS 249
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
AFE + + M + GG++ I + + + E A
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHI-------------YNVDEDNPGFQEPRAIFYTA 296
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSA 280
Q++ H +++RD+KPEN L +D +++ +D GL+ +K G+ K + G+
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 281 YYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF---WDKTEDGIFKE-VLRNKPDFR 335
++APE+L + S D +++GV Y ++ R PF +K E+ K+ VL +
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP 413
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARL 362
K S ++KDF + LL KDP RL
Sbjct: 414 DK----FSPASKDFCEALLQKDPEKRL 436
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + DG
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGDGT 363
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 529
+DF EF+ T+ +++ DSE+ + AF FD D +G+I+ ELR + G K +
Sbjct: 364 IDFPEFL--TMMARKMKYTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 418
Query: 530 ---IDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 419 DEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 85/148 (57%), Gaps = 12/148 (8%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + DG
Sbjct: 296 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGDGT 354
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGLKG--- 528
+DF EF+ + ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 355 IDFPEFL--IMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 409
Query: 529 --SIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 410 DEEVDEMIREADIDGDGQVNYEEFVQMM 437
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 137/334 (41%), Gaps = 71/334 (21%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D DF++ LG G G + + K +G +A K I I P + RE+++L
Sbjct: 32 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL 85
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
+V FY AF D + I ME +GG LD++L K A R +
Sbjct: 86 HE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVLKK------------AGRIPEQ 131
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
K + V++ + + + H ++HRD+KP N L S E +K DFG+S +
Sbjct: 132 ILGKVSIAVIKGLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDS 185
Query: 271 KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRP------------FWD 317
VG+ Y++PE L+ +SD+WS+G+ + GR P F
Sbjct: 186 MA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC 244
Query: 318 KTED---------------------------GIFK--EVLRNKPDFRRKPWPSISNSAKD 348
+ E IF+ + + N+P + P S +D
Sbjct: 245 QVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPP-PKLPSGVFSLEFQD 303
Query: 349 FVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
FV K L+K+P R Q + H +++ DA E+
Sbjct: 304 FVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 336
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 306 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 364
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGLKG--- 528
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 365 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 419
Query: 529 --SIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 420 DEEVDEMIREADIDGDGQVNYEEFVQMM 447
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 137/334 (41%), Gaps = 71/334 (21%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D DF++ LG G G + + K +G +A K I I P + RE+++L
Sbjct: 5 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL 58
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
+V FY AF D + I ME +GG LD++L K A R +
Sbjct: 59 HE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVLKK------------AGRIPEQ 104
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
K + V++ + + + H ++HRD+KP N L S E +K DFG+S +
Sbjct: 105 ILGKVSIAVIKGLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDS 158
Query: 271 KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRP------------FWD 317
VG+ Y++PE L+ +SD+WS+G+ + GR P F
Sbjct: 159 MA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC 217
Query: 318 KTED---------------------------GIFK--EVLRNKPDFRRKPWPSISNSAKD 348
+ E IF+ + + N+P + P S +D
Sbjct: 218 QVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP-PKLPSGVFSLEFQD 276
Query: 349 FVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
FV K L+K+P R Q + H +++ DA E+
Sbjct: 277 FVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 309
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 72.0 bits (175), Expect = 9e-13, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
A L DE++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 526
+G +DF EF+ L ++++ DSE+ + + AF FD D +GFI+ ELR + T L
Sbjct: 60 NGTIDFPEFL--NLMARKMKDTDSEE---KLKEAFRVFDKDGNGFISAAELRHVMTNLGE 114
Query: 527 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EAD+D DG+++ EF +++
Sbjct: 115 KLTDEEVDEMIREADVDGDGQVNYEEFVQVM 145
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 137/334 (41%), Gaps = 71/334 (21%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D DF++ LG G G + + K +G +A K I I P + RE+++L
Sbjct: 67 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL 120
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
+V FY AF D + I ME +GG LD++L K A R +
Sbjct: 121 HE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVLKK------------AGRIPEQ 166
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
K + V++ + + + H ++HRD+KP N L S E +K DFG+S +
Sbjct: 167 ILGKVSIAVIKGLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-D 219
Query: 271 KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRP------------FWD 317
VG+ Y++PE L+ +SD+WS+G+ + GR P F
Sbjct: 220 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC 279
Query: 318 KTED---------------------------GIFK--EVLRNKPDFRRKPWPSISNSAKD 348
+ E IF+ + + N+P + P S +D
Sbjct: 280 QVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP-PKLPSAVFSLEFQD 338
Query: 349 FVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
FV K L+K+P R Q + H +++ DA E+
Sbjct: 339 FVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 371
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 137/334 (41%), Gaps = 71/334 (21%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D DF++ LG G G + + K +G +A K I I P + RE+++L
Sbjct: 5 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL 58
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
+V FY AF D + I ME +GG LD++L K A R +
Sbjct: 59 HE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVLKK------------AGRIPEQ 104
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
K + V++ + + + H ++HRD+KP N L S E +K DFG+S +
Sbjct: 105 ILGKVSIAVIKGLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDS 158
Query: 271 KKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRP------------FWD 317
VG+ Y++PE L+ +SD+WS+G+ + GR P F
Sbjct: 159 MA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC 217
Query: 318 KTED---------------------------GIFK--EVLRNKPDFRRKPWPSISNSAKD 348
+ E IF+ + + N+P + P S +D
Sbjct: 218 QVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP-PKLPSGVFSLEFQD 276
Query: 349 FVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
FV K L+K+P R Q + H +++ DA E+
Sbjct: 277 FVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 309
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 137/334 (41%), Gaps = 71/334 (21%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D DF++ LG G G + + K +G +A K I I P + RE+++L
Sbjct: 5 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL 58
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
+V FY AF D + I ME +GG LD++L K A R +
Sbjct: 59 HE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVLKK------------AGRIPEQ 104
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
K + V++ + + + H ++HRD+KP N L S E +K DFG+S +
Sbjct: 105 ILGKVSIAVIKGLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDS 158
Query: 271 KKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRP------------FWD 317
VG+ Y++PE L+ +SD+WS+G+ + GR P F
Sbjct: 159 MA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC 217
Query: 318 KTED---------------------------GIFK--EVLRNKPDFRRKPWPSISNSAKD 348
+ E IF+ + + N+P + P S +D
Sbjct: 218 QVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP-PKLPSGVFSLEFQD 276
Query: 349 FVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
FV K L+K+P R Q + H +++ DA E+
Sbjct: 277 FVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 309
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 137/334 (41%), Gaps = 71/334 (21%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D DF++ LG G G + + K +G +A K I I P + RE+++L
Sbjct: 5 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL 58
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
+V FY AF D + I ME +GG LD++L K A R +
Sbjct: 59 HE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVLKK------------AGRIPEQ 104
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
K + V++ + + + H ++HRD+KP N L S E +K DFG+S +
Sbjct: 105 ILGKVSIAVIKGLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDS 158
Query: 271 KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRP------------FWD 317
VG+ Y++PE L+ +SD+WS+G+ + GR P F
Sbjct: 159 MA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC 217
Query: 318 KTED---------------------------GIFK--EVLRNKPDFRRKPWPSISNSAKD 348
+ E IF+ + + N+P + P S +D
Sbjct: 218 QVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP-PKLPSGVFSLEFQD 276
Query: 349 FVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
FV K L+K+P R Q + H +++ DA E+
Sbjct: 277 FVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 309
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 363
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGLKG--- 528
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 364 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 418
Query: 529 --SIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 419 DEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 363
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGLKG--- 528
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 364 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 418
Query: 529 --SIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 419 DEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/154 (29%), Positives = 88/154 (57%), Gaps = 12/154 (7%)
Query: 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 468
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 469 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 526
+G +DF EF+ T+ ++++ DSE+ + AF FD D +GFI+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGFISAAELRHVMTNLG 114
Query: 527 ----KGSIDPLLEEADIDKDGRISLSEFRRLLRT 556
+D ++ EADID DG+++ EF ++ +
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 148
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 526
DG +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 DGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGE 114
Query: 527 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 115 KLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 112/270 (41%), Gaps = 36/270 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G FG + DK G + AVKK+ +E + E + A +V Y
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVR---------LEVFRAEELMACAGLTSPRIVPLY 132
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
A + +V I MEL EGG L +++ E A + Q
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQ-----------------LVKEQGCLPEDRALYYLGQA 175
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV------ 277
L H ++H D+K +N L S ++L DFG + ++P +D++
Sbjct: 176 LEGLEYLHSRRILHGDVKADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKDLLTGDYIP 233
Query: 278 GSAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336
G+ ++APE VL R + DVWS + +L G P+ + ++ P R
Sbjct: 234 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVRE 293
Query: 337 KPWPSISNSAKDFVKKLLVKDPRARLTAAQ 366
P PS + +++ L K+P R++AA+
Sbjct: 294 IP-PSCAPLTAQAIQEGLRKEPIHRVSAAE 322
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 89/153 (58%), Gaps = 12/153 (7%)
Query: 408 ALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDC 467
++A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D
Sbjct: 1 SMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDA 59
Query: 468 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL 526
+ +G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 DGNGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNL 114
Query: 527 -----KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 115 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 147
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 56/260 (21%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ L G N++ + +D ++ E ++ K + TL
Sbjct: 84 ILENLRGGPNIITLADIVKDP----VSRTPALVFEHVNNTDFKQLYQTL----------- 128
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F
Sbjct: 129 ---TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYH 183
Query: 269 PGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW---------- 316
PG+++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 317 --------DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKK 352
+ D I K + P F RK W +S A DF+ K
Sbjct: 244 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDK 303
Query: 353 LLVKDPRARLTAAQALSHPW 372
LL D ++RLTA +A+ HP+
Sbjct: 304 LLRYDHQSRLTAREAMEHPY 323
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 56/260 (21%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ L G N++ + +D ++ E ++ K + TL
Sbjct: 84 ILENLRGGPNIITLADIVKDP----VSRTPALVFEHVNNTDFKQLYQTL----------- 128
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F
Sbjct: 129 ---TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYH 183
Query: 269 PGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW---------- 316
PG+++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 317 --------DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKK 352
+ D I K + P F RK W +S A DF+ K
Sbjct: 244 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDK 303
Query: 353 LLVKDPRARLTAAQALSHPW 372
LL D ++RLTA +A+ HP+
Sbjct: 304 LLRYDHQSRLTAREAMEHPY 323
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 56/260 (21%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ L G N++ + +D ++ E ++ K + TL
Sbjct: 84 ILENLRGGPNIITLADIVKDP----VSRTPALVFEHVNNTDFKQLYQTL----------- 128
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F
Sbjct: 129 ---TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYH 183
Query: 269 PGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW---------- 316
PG+++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 317 --------DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKK 352
+ D I K + P F RK W +S A DF+ K
Sbjct: 244 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDK 303
Query: 353 LLVKDPRARLTAAQALSHPW 372
LL D ++RLTA +A+ HP+
Sbjct: 304 LLRYDHQSRLTAREAMEHPY 323
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 56/260 (21%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ L G N++ + +D ++ E ++ K + TL
Sbjct: 84 ILENLRGGPNIITLADIVKDP----VSRTPALVFEHVNNTDFKQLRQTL----------- 128
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F
Sbjct: 129 ---TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYH 183
Query: 269 PGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW---------- 316
PG+++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 317 --------DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKK 352
+ D I K + P F RK W +S A DF+ K
Sbjct: 244 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDK 303
Query: 353 LLVKDPRARLTAAQALSHPW 372
LL D ++RLTA +A+ HP+
Sbjct: 304 LLRYDHQSRLTAREAMEHPY 323
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 56/260 (21%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ L G N++ + +D ++ E ++ K + TL
Sbjct: 82 ILENLRGGPNIITLADIVKDP----VSRTPALVFEHVNNTDFKQLYQTL----------- 126
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F
Sbjct: 127 ---TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYH 181
Query: 269 PGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW---------- 316
PG+++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 182 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 241
Query: 317 --------DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKK 352
+ D I K + P F RK W +S A DF+ K
Sbjct: 242 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDK 301
Query: 353 LLVKDPRARLTAAQALSHPW 372
LL D ++RLTA +A+ HP+
Sbjct: 302 LLRYDHQSRLTAREAMEHPY 321
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 56/260 (21%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ L G N++ + +D ++ E ++ K + TL
Sbjct: 84 ILENLRGGPNIITLADIVKDP----VSRTPALVFEHVNNTDFKQLYQTL----------- 128
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F
Sbjct: 129 ---TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYH 183
Query: 269 PGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW---------- 316
PG+++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 317 --------DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKK 352
+ D I K + P F RK W +S A DF+ K
Sbjct: 244 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDK 303
Query: 353 LLVKDPRARLTAAQALSHPW 372
LL D ++RLTA +A+ HP+
Sbjct: 304 LLRYDHQSRLTAREAMEHPY 323
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 56/260 (21%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ L G N++ + +D ++ E ++ K + TL
Sbjct: 84 ILENLRGGPNIITLADIVKDP----VSRTPALVFEHVNNTDFKQLYQTL----------- 128
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F
Sbjct: 129 ---TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYH 183
Query: 269 PGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW---------- 316
PG+++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 317 --------DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKK 352
+ D I K + P F RK W +S A DF+ K
Sbjct: 244 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDK 303
Query: 353 LLVKDPRARLTAAQALSHPW 372
LL D ++RLTA +A+ HP+
Sbjct: 304 LLRYDHQSRLTAREAMEHPY 323
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 56/260 (21%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ L G N++ + +D ++ E ++ K + TL
Sbjct: 83 ILENLRGGPNIITLADIVKDP----VSRTPALVFEHVNNTDFKQLYQTL----------- 127
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F
Sbjct: 128 ---TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYH 182
Query: 269 PGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW---------- 316
PG+++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 183 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 242
Query: 317 --------DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKK 352
+ D I K + P F RK W +S A DF+ K
Sbjct: 243 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDK 302
Query: 353 LLVKDPRARLTAAQALSHPW 372
LL D ++RLTA +A+ HP+
Sbjct: 303 LLRYDHQSRLTAREAMEHPY 322
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 56/260 (21%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ L G N++ + +D ++ E ++ K + TL
Sbjct: 84 ILENLRGGPNIITLADIVKDP----VSRTPALVFEHVNNTDFKQLYQTL----------- 128
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F
Sbjct: 129 ---TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYH 183
Query: 269 PGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW---------- 316
PG+++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 317 --------DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKK 352
+ D I K + P F RK W +S A DF+ K
Sbjct: 244 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDK 303
Query: 353 LLVKDPRARLTAAQALSHPW 372
LL D ++RLTA +A+ HP+
Sbjct: 304 LLRYDHQSRLTAREAMEHPY 323
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 56/260 (21%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ L G N++ + +D ++ E ++ K + TL
Sbjct: 84 ILENLRGGPNIITLADIVKDP----VSRTPALVFEHVNNTDFKQLYQTL----------- 128
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F
Sbjct: 129 ---TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYH 183
Query: 269 PGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW---------- 316
PG+++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 317 --------DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKK 352
+ D I K + P F RK W +S A DF+ K
Sbjct: 244 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDK 303
Query: 353 LLVKDPRARLTAAQALSHPW 372
LL D ++RLTA +A+ HP+
Sbjct: 304 LLRYDHQSRLTAREAMEHPY 323
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 56/260 (21%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ L G N++ + +D ++ E ++ K + TL
Sbjct: 83 ILENLRGGPNIITLADIVKDP----VSRTPALVFEHVNNTDFKQLYQTL----------- 127
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F
Sbjct: 128 ---TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYH 182
Query: 269 PGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW---------- 316
PG+++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 183 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 242
Query: 317 --------DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKK 352
+ D I K + P F RK W +S A DF+ K
Sbjct: 243 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDK 302
Query: 353 LLVKDPRARLTAAQALSHPW 372
LL D ++RLTA +A+ HP+
Sbjct: 303 LLRYDHQSRLTAREAMEHPY 322
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 111/270 (41%), Gaps = 36/270 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G FG + DK G + AVKK+ +E + E + A +V Y
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVR---------LEVFRAEELMACAGLTSPRIVPLY 151
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
A + +V I MEL EGG L +++ E A + Q
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQ-----------------LVKEQGCLPEDRALYYLGQA 194
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP---GKKFQD---IV 277
L H ++H D+K +N L S ++L DFG + ++P GK I
Sbjct: 195 LEGLEYLHSRRILHGDVKADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKSLLTGDYIP 252
Query: 278 GSAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336
G+ ++APE VL R + DVWS + +L G P+ + ++ P R
Sbjct: 253 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVRE 312
Query: 337 KPWPSISNSAKDFVKKLLVKDPRARLTAAQ 366
P PS + +++ L K+P R++AA+
Sbjct: 313 IP-PSCAPLTAQAIQEGLRKEPIHRVSAAE 341
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 71.2 bits (173), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 88/152 (57%), Gaps = 12/152 (7%)
Query: 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 468
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 469 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 526
+G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLG 114
Query: 527 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 71.2 bits (173), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 88/152 (57%), Gaps = 12/152 (7%)
Query: 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 468
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 469 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 526
+G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLG 114
Query: 527 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 71.2 bits (173), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 88/152 (57%), Gaps = 12/152 (7%)
Query: 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 468
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 469 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 526
+G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLG 114
Query: 527 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 86/151 (56%), Gaps = 12/151 (7%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 526
+G +DF EF+ +L +++E DSE+ + AF+ FD D +G I+ ELR + T L
Sbjct: 60 NGTIDFPEFL--SLMARKMKEQDSEEELIE---AFKVFDRDGNGLISAAELRHVMTNLGE 114
Query: 527 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG I+ EF R++
Sbjct: 115 KLTDDEVDEMIREADIDGDGHINYEEFVRMM 145
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 56/260 (21%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ L G N++ + +D ++ E ++ K + TL
Sbjct: 89 ILENLRGGPNIITLADIVKDP----VSRTPALVFEHVNNTDFKQLYQTL----------- 133
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F
Sbjct: 134 ---TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYH 188
Query: 269 PGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW---------- 316
PG+++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 189 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 248
Query: 317 --------DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKK 352
+ D I K + P F RK W +S A DF+ K
Sbjct: 249 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDK 308
Query: 353 LLVKDPRARLTAAQALSHPW 372
LL D ++RLTA +A+ HP+
Sbjct: 309 LLRYDHQSRLTAREAMEHPY 328
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 268 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 326
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGLKG--- 528
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 327 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 381
Query: 529 --SIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 382 DEEVDEMIREADIDGDGQVNYEEFVQMM 409
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 86/151 (56%), Gaps = 12/151 (7%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 AQELTEEQIAEFKEAFALFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 526
+G +DF EF+ +L +++E DSE+ + AF+ FD D +G I+ ELR + T L
Sbjct: 60 NGTIDFPEFL--SLMARKMKEQDSEEELIE---AFKVFDRDGNGLISAAELRHVMTNLGE 114
Query: 527 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG I+ EF R++
Sbjct: 115 KLTDDEVDEMIREADIDGDGHINYEEFVRMM 145
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 71.2 bits (173), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 88/152 (57%), Gaps = 12/152 (7%)
Query: 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 468
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 469 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 526
+G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLG 114
Query: 527 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 71.2 bits (173), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 88/152 (57%), Gaps = 12/152 (7%)
Query: 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 468
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 469 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 526
+G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLG 114
Query: 527 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 115 EKLTDEEVDQMIREADIDGDGQVNYEEFVQMM 146
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 71.2 bits (173), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 86/151 (56%), Gaps = 12/151 (7%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
A L DE++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 526
+G +DF EF+ L ++++ DSE+ + AF FD D +GFI+ ELR + T L
Sbjct: 60 NGTIDFPEFL--NLMARKMKDTDSEE---ELKEAFRVFDKDGNGFISAAELRHVMTNLGE 114
Query: 527 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EAD+D DG+++ EF +++
Sbjct: 115 KLTDEEVDEMIREADVDGDGQVNYEEFVQVM 145
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 56/260 (21%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ L G N++ + +D ++ E ++ K + TL
Sbjct: 84 ILENLRGGPNIITLADIVKDP----VSRTPALVFEHVNNTDFKQLYQTL----------- 128
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F
Sbjct: 129 ---TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYH 183
Query: 269 PGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW---------- 316
PG+++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 317 --------DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKK 352
+ D I K + P F RK W +S A DF+ K
Sbjct: 244 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDK 303
Query: 353 LLVKDPRARLTAAQALSHPW 372
LL D ++RLTA +A+ HP+
Sbjct: 304 LLRYDHQSRLTAREAMEHPY 323
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 87/152 (57%), Gaps = 12/152 (7%)
Query: 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 468
+A L D+++++ ++ F D D +G I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 469 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 526
+G +DF EF+ L ++++ DSE+ + AF FD D++GFI+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--NLMARKMKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLG 114
Query: 527 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EAD+D DG+I+ EF +++
Sbjct: 115 EKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 86/151 (56%), Gaps = 12/151 (7%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 526
+G +DF EF+ T+ ++++ DSE+ + AF FD D +GFI+ ELR + T L
Sbjct: 60 NGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGFISAAELRHVMTNLGE 114
Query: 527 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF ++
Sbjct: 115 KLTDEEVDEMIREADIDGDGQVNYEEFVTMM 145
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 32/228 (14%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 34 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRK-T 88
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N++ F + + I + CEG L + +I T + I
Sbjct: 89 RHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDI--------- 136
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGK 271
RQ + H ++HRD+K N ED ++K DFGL+
Sbjct: 137 -----ARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSH 188
Query: 272 KFQDIVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPF 315
+F+ + GS ++APEV++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 189 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 87/153 (56%), Gaps = 12/153 (7%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 526
+G +DF EF+ T+ ++++ DSE+ + AF FD D +GFI+ ELR + T L
Sbjct: 60 NGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGFISAAELRHVMTNLGE 114
Query: 527 ---KGSIDPLLEEADIDKDGRISLSEFRRLLRT 556
+D ++ EADID DG+++ EF ++ +
Sbjct: 115 KLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 147
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 329
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGLKG--- 528
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 330 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 384
Query: 529 --SIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 385 DEEVDEMIREADIDGDGQVNYEEFVQMM 412
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 329
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGLKG--- 528
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 330 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 384
Query: 529 --SIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 385 DEEVDEMIREADIDGDGQVNYEEFVQMM 412
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 32/228 (14%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 35 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRK-T 89
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N++ F + + I + CEG L + +I T + I
Sbjct: 90 RHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDI--------- 137
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGK 271
RQ + H ++HRD+K N ED ++K DFGL+
Sbjct: 138 -----ARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSH 189
Query: 272 KFQDIVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPF 315
+F+ + GS ++APEV++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 190 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 363
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 529
+DF EF+ T+ +++ DSE+ + AF FD D +G+I+ ELR + G K +
Sbjct: 364 IDFPEFL--TMMARKMKYTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 418
Query: 530 ---IDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 419 DEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 88/154 (57%), Gaps = 12/154 (7%)
Query: 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 468
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 469 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 526
+G +DF EF+ T+ ++++ DSE+ + AF FD D +GFI+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGFISAAELRHVMTNLG 114
Query: 527 ----KGSIDPLLEEADIDKDGRISLSEFRRLLRT 556
+D ++ E+DID DG+++ EF ++ +
Sbjct: 115 EKLTDEEVDEMIRESDIDGDGQVNYEEFVTMMTS 148
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 136/314 (43%), Gaps = 63/314 (20%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVK--KIEKNKMILPIAVEDVKREVKILQALA 154
RY +G G +G Y A D +G VA+K ++ + LPI+ REV +L+ L
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIST---VREVALLRRL- 60
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR-YTE 213
AFE N V + M++C DR I TL F + +D R Y +
Sbjct: 61 ---------EAFEHPNVVRL-MDVCATSRT-DR----EIKVTLV---FEHVDQDLRTYLD 102
Query: 214 KDAAV---------VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
K ++RQ LR H + +VHRD+KPEN L S ++K DFGL+
Sbjct: 103 KAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLA 159
Query: 265 DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG- 322
+V + +Y APEVL + + D+WS+G I + + R+P + +
Sbjct: 160 RIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCI-FAEMFRRKPLFCGNSEAD 218
Query: 323 ----IFKEV-LRNKPDFRR--------------KP----WPSISNSAKDFVKKLLVKDPR 359
IF + L + D+ R +P P + S + ++L +P
Sbjct: 219 QLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPH 278
Query: 360 ARLTAAQALSHPWV 373
R++A +AL H ++
Sbjct: 279 KRISAFRALQHSYL 292
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 70.5 bits (171), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 60
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 526
+G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 61 NGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGE 115
Query: 527 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 116 XLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 70.5 bits (171), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 526
+G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 NGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGE 114
Query: 527 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 115 XLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 70.5 bits (171), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 526
+G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 NGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGE 114
Query: 527 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 115 KLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 136/314 (43%), Gaps = 63/314 (20%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVK--KIEKNKMILPIAVEDVKREVKILQALA 154
RY +G G +G Y A D +G VA+K ++ + LPI+ REV +L+ L
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIST---VREVALLRRL- 60
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR-YTE 213
AFE N V + M++C DR I TL F + +D R Y +
Sbjct: 61 ---------EAFEHPNVVRL-MDVCATSRT-DR----EIKVTLV---FEHVDQDLRTYLD 102
Query: 214 KDAAV---------VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
K ++RQ LR H + +VHRD+KPEN L S ++K DFGL+
Sbjct: 103 KAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLA 159
Query: 265 DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG- 322
+V + +Y APEVL + + D+WS+G I + + R+P + +
Sbjct: 160 RIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCI-FAEMFRRKPLFCGNSEAD 218
Query: 323 ----IFKEV-LRNKPDFRR--------------KP----WPSISNSAKDFVKKLLVKDPR 359
IF + L + D+ R +P P + S + ++L +P
Sbjct: 219 QLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPH 278
Query: 360 ARLTAAQALSHPWV 373
R++A +AL H ++
Sbjct: 279 KRISAFRALQHSYL 292
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 24/199 (12%)
Query: 381 EIPIDISVLNNMRQFVKYSRLKQFALRALASTL-DDEELADLRDQFDAIDVDKNGSISLE 439
E+P + + NMR+F +L Q AL +AS L EE +L D F ID + +G + +
Sbjct: 24 ELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQ 83
Query: 440 EMRQALAK---------DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490
E+ +K DLP ES V IL A D + +G +D+SEFV + L
Sbjct: 84 ELIDGYSKLSGEEVAVFDLPQI--ESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLS 141
Query: 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL----KGSIDPLLEEADIDKDGRIS 546
D + ++AF+KFD D +G I+ +EL GL + ++ D + DG +
Sbjct: 142 KD------KLESAFQKFDQDGNGKISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVD 195
Query: 547 LSEFRRLLRTASISSRNVP 565
EF ++++ + S N P
Sbjct: 196 FEEFCKMIQK--LCSNNEP 212
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 85/148 (57%), Gaps = 12/148 (8%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 363
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGLKG--- 528
+DF EF+ T+ +++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 364 IDFPEFL--TMMARWMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 418
Query: 529 --SIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 419 DEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 32/228 (14%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 12 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRK-T 66
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N++ F + + I + CEG L + +I T + I
Sbjct: 67 RHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDI--------- 114
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGK 271
RQ + H ++HRD+K N ED ++K DFGL+
Sbjct: 115 -----ARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSH 166
Query: 272 KFQDIVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPF 315
+F+ + GS ++APEV++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 167 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 102/228 (44%), Gaps = 32/228 (14%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 12 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRK-T 66
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N++ F + + I + CEG L + +I T ++
Sbjct: 67 RHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHL--HIIET--------------KFEMI 109
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGK 271
+ RQ + H ++HRD+K N ED ++K DFGL+
Sbjct: 110 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSH 166
Query: 272 KFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRPF 315
+F+ + GS ++APEV+ K +SDV++ G++ Y L+ G+ P+
Sbjct: 167 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 7 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 65
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 526
+G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 66 NGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGE 120
Query: 527 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 121 KLTDEEVDEMIREADIDGDGQVNYEEFVQMM 151
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 526
+G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 NGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGE 114
Query: 527 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 115 KLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 102/228 (44%), Gaps = 32/228 (14%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 7 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRK-T 61
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N++ F + + I + CEG L + +I T ++
Sbjct: 62 RHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHL--HIIET--------------KFEMI 104
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGK 271
+ RQ + H ++HRD+K N ED ++K DFGL+
Sbjct: 105 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSH 161
Query: 272 KFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRPF 315
+F+ + GS ++APEV+ K +SDV++ G++ Y L+ G+ P+
Sbjct: 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 32/228 (14%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 9 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRK-T 63
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N++ F + + I + CEG L + +I T ++
Sbjct: 64 RHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHL--HIIET--------------KFEMI 106
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGK 271
+ RQ + H ++HRD+K N ED ++K DFGL+
Sbjct: 107 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSH 163
Query: 272 KFQDIVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPF 315
+F+ + GS ++APEV++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 164 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 70.1 bits (170), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/148 (29%), Positives = 85/148 (57%), Gaps = 12/148 (8%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L DE++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 59
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL----- 526
+DF EF+ L ++++ DSE+ + AF FD D +GFI+ ELR + T L
Sbjct: 60 IDFPEFL--NLMARKMKDTDSEE---ELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLT 114
Query: 527 KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EAD+D DG+++ EF +++
Sbjct: 115 DEEVDEMIREADVDGDGQVNYEEFVQVM 142
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 122/292 (41%), Gaps = 54/292 (18%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI-----EKNKMILPIAVEDVKREVKILQALAGHEN 158
+G G +G K +G +AVK+I EK + L + ++ V R +
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRS-------SDCPY 82
Query: 159 VVKFYNAFEDDNYVYIAMELCEGG---------ELLDRILAKMISTTLTSAWFLAIRKDS 209
+V+FY A + +I MEL +LD ++ + I +T A A+
Sbjct: 83 IVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNH-- 140
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIK 268
+++ L++ +HRD+KP N L + ++K DFG+S +
Sbjct: 141 ----------LKENLKI---------IHRDIKPSNILLDRS---GNIKLCDFGISGQLVD 178
Query: 269 PGKKFQDIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILLCGRRPF--WDKTED 321
K +D G Y+APE + + + SDVWS+G+ Y L GR P+ W+ D
Sbjct: 179 SIAKTRD-AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD 237
Query: 322 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
+ + V + P S S +FV L KD R + L HP++
Sbjct: 238 QLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 32/228 (14%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 27 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRK-T 81
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N++ F + + I + CEG L + +I T + I
Sbjct: 82 RHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDI--------- 129
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGK 271
RQ + H ++HRD+K N ED ++K DFGL+
Sbjct: 130 -----ARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATEKSRWSGSH 181
Query: 272 KFQDIVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPF 315
+F+ + GS ++APEV++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 182 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 32/228 (14%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 35 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRK-T 89
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N++ F + + I + CEG L + +I T + I
Sbjct: 90 RHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDI--------- 137
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGK 271
RQ + H ++HRD+K N ED ++K DFGL+
Sbjct: 138 -----ARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATEKSRWSGSH 189
Query: 272 KFQDIVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPF 315
+F+ + GS ++APEV++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 190 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 102/228 (44%), Gaps = 32/228 (14%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 7 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRK-T 61
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N++ F + + I + CEG L + +I T ++
Sbjct: 62 RHVNILLFM-GYSTAPQLAIVTQWCEGSSLYHHL--HIIET--------------KFEMI 104
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGK 271
+ RQ + H ++HRD+K N ED ++K DFGL+
Sbjct: 105 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSH 161
Query: 272 KFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRPF 315
+F+ + GS ++APEV+ K +SDV++ G++ Y L+ G+ P+
Sbjct: 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 70.1 bits (170), Expect = 3e-12, Method: Composition-based stats.
Identities = 48/146 (32%), Positives = 80/146 (54%), Gaps = 12/146 (8%)
Query: 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 470
S L +E++A+ +D F D + G I+ E+ L + L E+ + +++ + N +
Sbjct: 2 SELTEEQIAEFKDAFVQFDKEGTGKIATREL-GTLMRTLGQNPTEAELQDLIAEAENNNN 60
Query: 471 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLK 527
G ++F+EF + Q+ E D+E+ + AF+ FD D DGFI+P ELR ++ G K
Sbjct: 61 GQLNFTEFCG--IMAKQMRETDTEE---EMREAFKIFDRDGDGFISPAELRFVMINLGEK 115
Query: 528 GS---IDPLLEEADIDKDGRISLSEF 550
+ ID ++ EAD D DG I+ EF
Sbjct: 116 VTDEEIDEMIREADFDGDGMINYEEF 141
Score = 35.8 bits (81), Expect = 0.059, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 473
D EE ++R+ F D D +G IS E+R + +L K+ + + E+++ D + DG++
Sbjct: 80 DTEE--EMREAFKIFDRDGDGFISPAELRFVMI-NLGEKVTDEEIDEMIREADFDGDGMI 136
Query: 474 DFSEFV 479
++ EFV
Sbjct: 137 NYEEFV 142
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 26/184 (14%)
Query: 386 ISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQAL 445
I VL N + + + ++ A+ +A +D ++ L+ F +D D G I+ E++++ L
Sbjct: 19 IHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGL 78
Query: 446 AKD---LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQA 502
KD LP+ +L ID + G +D++EF+AA L QL S+K
Sbjct: 79 EKDGLKLPYNFDL-----LLDQIDSDGSGKIDYTEFIAAALDRKQL----SKKL---IYC 126
Query: 503 AFEKFDIDRDGFITPEELR--MHTG-LKGSIDP--------LLEEADIDKDGRISLSEFR 551
AF FD+D DG IT EL ++ G KG+I ++ + D + DG+I EF
Sbjct: 127 AFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFS 186
Query: 552 RLLR 555
+++
Sbjct: 187 EMMK 190
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 69.7 bits (169), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 59
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL----- 526
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 114
Query: 527 KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 115 DEEVDEMIREADIDGDGQVNYEEFVQMM 142
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 112/300 (37%), Gaps = 47/300 (15%)
Query: 89 GYDKD-----FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDV 143
GYD F + + LGHG +G + K +G AVK+ M +D
Sbjct: 45 GYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR----SMSPFRGPKDR 100
Query: 144 KR---EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSA 200
R EV + + H V+ A+E+ +Y+ ELC G L A S
Sbjct: 101 ARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQV 159
Query: 201 WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
W +R L A H GLVH D+KP N K D
Sbjct: 160 W----------------GYLRDTLLALAHLHSQGLVHLDVKPANIFLGP---RGRCKLGD 200
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRR-----PF 315
FGL + + G Y+APE+L+ G +DV+S+G+ + C
Sbjct: 201 FGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEG 260
Query: 316 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
W + G P+F +S+ + + +L DP+ R TA L+ P +R+
Sbjct: 261 WQQLRQGYL------PPEFTA----GLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 136/314 (43%), Gaps = 63/314 (20%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVK--KIEKNKMILPIAVEDVKREVKILQALA 154
RY +G G +G Y A D +G VA+K ++ + LPI+ REV +L+ L
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIST---VREVALLRRL- 60
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR-YTE 213
AFE N V + M++C DR I TL F + +D R Y +
Sbjct: 61 ---------EAFEHPNVVRL-MDVCATSRT-DR----EIKVTLV---FEHVDQDLRTYLD 102
Query: 214 KDAAV---------VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
K ++RQ LR H + +VHRD+KPEN L S ++K DFGL+
Sbjct: 103 KAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLA 159
Query: 265 DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG- 322
+V + +Y APEVL + + D+WS+G I + + R+P + +
Sbjct: 160 RIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCI-FAEMFRRKPLFCGNSEAD 218
Query: 323 ----IFKEV-LRNKPDFRR--------------KP----WPSISNSAKDFVKKLLVKDPR 359
IF + L + D+ R +P P + S + ++L +P
Sbjct: 219 QLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPH 278
Query: 360 ARLTAAQALSHPWV 373
R++A +AL H ++
Sbjct: 279 KRISAFRALQHSYL 292
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 69.7 bits (169), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 91/153 (59%), Gaps = 12/153 (7%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
A L +E++ D ++ F D D +G I++EE+ + + L E + +++ +D +
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVI-RSLDQNPTEEELQDMISEVDADG 59
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 526
+G ++F EF+ +L ++++ D+E+ + AF+ FD D++G+I+ ELR ++ G
Sbjct: 60 NGTIEFDEFL--SLMAKKVKDTDAEE---ELKEAFKVFDKDQNGYISASELRHVMINLGE 114
Query: 527 KGS---IDPLLEEADIDKDGRISLSEFRRLLRT 556
K + ++ +++EAD+D DG+++ EF +++ T
Sbjct: 115 KLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMT 147
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 102/228 (44%), Gaps = 32/228 (14%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 7 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRK-T 61
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N++ F + + I + CEG L + +I T ++
Sbjct: 62 RHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHL--HIIET--------------KFEMI 104
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGK 271
+ RQ + H ++HRD+K N ED ++K DFGL+
Sbjct: 105 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATEKSRWSGSH 161
Query: 272 KFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRPF 315
+F+ + GS ++APEV+ K +SDV++ G++ Y L+ G+ P+
Sbjct: 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 143/368 (38%), Gaps = 115/368 (31%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP-IAVEDVKREVKILQALAGH 156
Y I L+G G +GY Y+A DK VA+KK+ N+M I + + RE+ IL L
Sbjct: 30 YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKV--NRMFEDLIDCKRILREITILNRLKS- 86
Query: 157 ENVVKFYNAFEDDNY-----VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
+ +++ ++ ++ +YI +E+ + L K+ T + FL
Sbjct: 87 DYIIRLHDLIIPEDLLKFDELYIVLEIADSD------LKKLFKTPI----FL-------- 128
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--- 268
TE+ ++ +L H G++HRD+KP N L +D S+K DFGL+ I
Sbjct: 129 TEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLL---NQDCSVKICDFGLARTINSDK 185
Query: 269 ----------------PG-------KKFQDIVGSAYYVAPE--VLKRKSGPESDVWSIGV 303
PG K+ V + +Y APE +L+ D+WS G
Sbjct: 186 DIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGC 245
Query: 304 ITYILL----------CGRRPFW---------------------DKTEDGIFKEVLRNKP 332
I LL R P + ++ + I V+ P
Sbjct: 246 IFAELLNMMKSHINNPTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPP 305
Query: 333 -------------------------DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 367
D +K + SIS D ++ +L + + R+T +A
Sbjct: 306 EEDLKCITKQEVIKYIKLFPTRDGIDLSKK-YSSISKEGIDLLESMLRFNAQKRITIDKA 364
Query: 368 LSHPWVRE 375
LSHP++++
Sbjct: 365 LSHPYLKD 372
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 69.3 bits (168), Expect = 5e-12, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 60
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL----- 526
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 61 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 115
Query: 527 KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 116 DEEVDEMIREADIDGDGQVNYEEFVQMM 143
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 69.3 bits (168), Expect = 5e-12, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 3 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 61
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL----- 526
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 62 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 116
Query: 527 KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 117 DEEVDEMIREADIDGDGQVNYEEFVQMM 144
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 69.3 bits (168), Expect = 5e-12, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 60
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL----- 526
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 61 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 115
Query: 527 KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 116 DEEVDEMIREADIDGDGQVNYEEFVQMM 143
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 69.3 bits (168), Expect = 6e-12, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 87/152 (57%), Gaps = 12/152 (7%)
Query: 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 468
+A L ++++++ ++ F D D +G I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 469 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 526
+G +DF EF+ L ++++ DSE+ + AF FD D++GFI+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--NLMARKMKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLG 114
Query: 527 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EAD+D DG+I+ EF +++
Sbjct: 115 EKLTDEEVDEMIREADVDGDGQINYDEFVKVM 146
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 32/228 (14%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D DF+R LG G G + +G +A K I I P + RE+++L
Sbjct: 15 DDDFERISE----LGAGNGGVVTKVQHRPSGLIMARKLIHLE--IKPAIRNQIIRELQVL 68
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRIL--AKMISTTLTSAWFLAIRKD 208
+V FY AF D + I ME +GG LD++L AK I + +A+ +
Sbjct: 69 HE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVLKEAKRIPEEILGKVSIAVLRG 126
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
Y + H ++HRD+KP N L S E +K DFG+S +
Sbjct: 127 LAYLREK-----------------HQIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI 166
Query: 269 PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF 315
VG+ Y+APE L+ +SD+WS+G+ L GR P
Sbjct: 167 DSMA-NSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 38/231 (16%)
Query: 93 DFDRR--YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----E 146
+FD R G +G G FG Y N VAVKK+ ++ I E++K+ E
Sbjct: 26 NFDERPISVGGNKMGEGGFGVVYKGY--VNNTTVAVKKLAA---MVDITTEELKQQFDQE 80
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
+K++ A HEN+V+ D + + + G LLDR+ + T +W + +
Sbjct: 81 IKVM-AKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCK 137
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ AA + + H + +HRD+K N L A + K +DFGL+
Sbjct: 138 -----IAQGAANGINFL-------HENHHIHRDIKSANILLDEA---FTAKISDFGLA-- 180
Query: 267 IKPGKKFQD------IVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCG 311
+ +KF IVG+ Y+APE L+ + P+SD++S GV+ ++ G
Sbjct: 181 -RASEKFAQTVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 38/231 (16%)
Query: 93 DFDRR--YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----E 146
+FD R G +G G FG Y N VAVKK+ ++ I E++K+ E
Sbjct: 26 NFDERPISVGGNKMGEGGFGVVYKGY--VNNTTVAVKKLAA---MVDITTEELKQQFDQE 80
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
+K++ A HEN+V+ D + + + G LLDR+ + T +W + +
Sbjct: 81 IKVM-AKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCK 137
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ AA + + H + +HRD+K N L A + K +DFGL+
Sbjct: 138 -----IAQGAANGINFL-------HENHHIHRDIKSANILLDEA---FTAKISDFGLA-- 180
Query: 267 IKPGKKFQD------IVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCG 311
+ +KF IVG+ Y+APE L+ + P+SD++S GV+ ++ G
Sbjct: 181 -RASEKFAQTVMXSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 136/311 (43%), Gaps = 62/311 (19%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + + LG G++ + A + N +RV VK ++ + +KREVKIL+ L G
Sbjct: 45 YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPV------KKKKIKREVKILENLRGGT 98
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N++K + +D ++ E ++ K + L T+ D
Sbjct: 99 NIIKLIDTVKDP----VSKTPALVFEYINNTDFKQLYQIL--------------TDFDIR 140
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++L+ CH G++HRD+KP N + ++ L+ D+GL++F P +++ V
Sbjct: 141 FYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQK--KLRLIDWGLAEFYHPAQEYNVRV 198
Query: 278 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED-------------- 321
S Y+ PE+L + D+WS+G + ++ R PF+ ++
Sbjct: 199 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTE 258
Query: 322 ---GIFKEV-LRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLVKDPRAR 361
G K+ + P F RK W + +S A D + KLL D + R
Sbjct: 259 ELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQR 318
Query: 362 LTAAQALSHPW 372
LTA +A+ HP+
Sbjct: 319 LTAKEAMEHPY 329
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 137/311 (44%), Gaps = 62/311 (19%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + + LG G++ + A + N +RV VK ++ K + +KREVKIL+ L G
Sbjct: 40 YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKK------KKIKREVKILENLRGGT 93
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N++K + +D ++ E ++ K + L T+ D
Sbjct: 94 NIIKLIDTVKDP----VSKTPALVFEYINNTDFKQLYQIL--------------TDFDIR 135
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ ++L+ CH G++HRD+KP N + ++ L+ D+GL++F P +++ V
Sbjct: 136 FYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQK--KLRLIDWGLAEFYHPAQEYNVRV 193
Query: 278 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED-------------- 321
S Y+ PE+L + D+WS+G + ++ R PF+ ++
Sbjct: 194 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTE 253
Query: 322 ---GIFKEV-LRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLVKDPRAR 361
G K+ + P F RK W + +S A D + KLL D + R
Sbjct: 254 ELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQR 313
Query: 362 LTAAQALSHPW 372
LTA +A+ HP+
Sbjct: 314 LTAKEAMEHPY 324
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 68.6 bits (166), Expect = 8e-12, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 526
+G +DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 NGTIDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGE 114
Query: 527 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EA+ID DG+++ EF +++
Sbjct: 115 KLTDEEVDEMIREANIDGDGQVNYEEFVQMM 145
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 134/317 (42%), Gaps = 66/317 (20%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIE-----KNKMILPIAVEDVKREVKILQ 151
RY +G G +G Y A D +G VA+K + LPI+ REV +L+
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPIST---VREVALLR 66
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR- 210
L AFE N V + M++C DR I TL F + +D R
Sbjct: 67 RL----------EAFEHPNVVRL-MDVCATSRT-DR----EIKVTLV---FEHVDQDLRT 107
Query: 211 YTEKDAAV---------VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261
Y +K ++RQ LR H + +VHRD+KPEN L S ++K DF
Sbjct: 108 YLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADF 164
Query: 262 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE 320
GL+ +V + +Y APEVL + + D+WS+G I + + R+P +
Sbjct: 165 GLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCI-FAEMFRRKPLFCGNS 223
Query: 321 DG-----IFKEV-LRNKPDFRR--------------KP----WPSISNSAKDFVKKLLVK 356
+ IF + L + D+ R +P P + S + ++L
Sbjct: 224 EADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTF 283
Query: 357 DPRARLTAAQALSHPWV 373
+P R++A +AL H ++
Sbjct: 284 NPHKRISAFRALQHSYL 300
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 121/285 (42%), Gaps = 62/285 (21%)
Query: 118 KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH-----ENVVKFYNAFEDDNYV 172
K+N D++++K +D K E++I+ + E ++ Y+ V
Sbjct: 75 KSNNDKISIKS----------KYDDFKNELQIITDIKNEYCLTCEGIITNYDE------V 118
Query: 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLR--VAAEC 230
YI E E +L +F + D YT V++ +++ + +
Sbjct: 119 YIIYEYMENDSILK-----------FDEYFFVL--DKNYTCFIPIQVIKCIIKSVLNSFS 165
Query: 231 HLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV 287
++H + HRD+KP N L ++ +K +DFG S+++ KK + G+ ++ PE
Sbjct: 166 YIHNEKNICHRDVKPSNIL---MDKNGRVKLSDFGESEYM-VDKKIKGSRGTYEFMPPEF 221
Query: 288 LKRKS---GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK------------- 331
+S G + D+WS+G+ Y++ PF K +R K
Sbjct: 222 FSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLY 281
Query: 332 PDFRRKPWPS---ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
P +K S +SN DF+K L K+P R+T+ AL H W+
Sbjct: 282 PLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWL 326
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 126/302 (41%), Gaps = 60/302 (19%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI-----EKNKMILPIAVEDVKREVKILQ 151
R + ++L G F + Y A D +G A+K++ EKN+ I+ +EV ++
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAII--------QEVCFMK 80
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
L+GH N+V+F +A I E + G+ +L ++ L FL +
Sbjct: 81 KLSGHPNIVQFCSA------ASIGKEESDTGQAEFLLLTELCKGQLVE--FLKKMESRGP 132
Query: 212 TEKDAAV-VVRQMLRVAAECHLH----GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
D + + Q R H+H ++HRD+K EN L + ++K DFG +
Sbjct: 133 LSCDTVLKIFYQTCRAVQ--HMHRQKPPIIHRDLKVENLLLSN---QGTIKLCDFGSATT 187
Query: 267 IKPGKKFQDIVGSA----------------YYVAPEVLKRKS----GPESDVWSIGVITY 306
I + D SA Y PE++ S G + D+W++G I Y
Sbjct: 188 IS---HYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY 244
Query: 307 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 366
+L + PF EDG ++ K + P + ++ +L +P RL+ A+
Sbjct: 245 LLCFRQHPF----EDGAKLRIVNGK--YSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAE 298
Query: 367 AL 368
+
Sbjct: 299 VV 300
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 38/231 (16%)
Query: 93 DFDRR--YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----E 146
+FD R G +G G FG Y N VAVKK+ ++ I E++K+ E
Sbjct: 20 NFDERPISVGGNKMGEGGFGVVY--KGYVNNTTVAVKKLAA---MVDITTEELKQQFDQE 74
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
+K++ A HEN+V+ D + + + G LLDR+ + T +W + +
Sbjct: 75 IKVM-AKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCK 131
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ AA + + H + +HRD+K N L A + K +DFGL+
Sbjct: 132 -----IAQGAANGINFL-------HENHHIHRDIKSANILLDEA---FTAKISDFGLA-- 174
Query: 267 IKPGKKFQD------IVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCG 311
+ +KF IVG+ Y+APE L+ + P+SD++S GV+ ++ G
Sbjct: 175 -RASEKFAQXVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 122/301 (40%), Gaps = 63/301 (20%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
DK F + +L+G G FG + A + +G +K+++ N E +REVK L
Sbjct: 6 DKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKAL 58
Query: 151 QALAGHENVVKFYNAFEDDNY----------------VYIAMELCEGGELLDRILAKMIS 194
L H N+V + ++ +Y ++I ME C+ G L
Sbjct: 59 AKL-DHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTL---------- 107
Query: 195 TTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254
W + R+ + + A + Q+ + H L++RD+KP N K+
Sbjct: 108 ----EQW-IEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQ-- 160
Query: 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILL--CG 311
+K DFGL +K K G+ Y++PE + + G E D++++G+I LL C
Sbjct: 161 -VKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCD 219
Query: 312 ----RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 367
F+ DGI ++ K K ++KLL K P R ++
Sbjct: 220 TAFETSKFFTDLRDGIISDIFDKKE--------------KTLLQKLLSKKPEDRPNTSEI 265
Query: 368 L 368
L
Sbjct: 266 L 266
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 123/306 (40%), Gaps = 66/306 (21%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
+LG G FG A + + A+KKI + L + EV +L +L H+ VV++
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS----EVXLLASL-NHQYVVRY 67
Query: 163 YNAF-EDDNYV------------YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
Y A+ E N+V +I E CE L D I ++ ++ W L
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL------ 121
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS----- 264
RQ+L + H G++HR++KP N E ++K DFGL+
Sbjct: 122 ----------FRQILEALSYIHSQGIIHRNLKPXNIFI---DESRNVKIGDFGLAKNVHR 168
Query: 265 --DFIK------PGK--KFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGR 312
D +K PG +G+A YVA EVL + D +S+G+I + +
Sbjct: 169 SLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY-- 226
Query: 313 RPFWDKTEDGIFKEVLRN-----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 367
PF E + LR+ PDF K ++ L+ DP R A
Sbjct: 227 -PFSTGXERVNILKKLRSVSIEFPPDFDDNK----XKVEKKIIRLLIDHDPNKRPGARTL 281
Query: 368 LSHPWV 373
L+ W+
Sbjct: 282 LNSGWL 287
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 107/242 (44%), Gaps = 20/242 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVA----TDKANGDRVAVKKIEKNKMILPIAVE----DVKREVK 148
R +GK LG G FG +A DK +RV + KM+ A E D+ E++
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAV---KMLKSDATEKDLSDLISEME 85
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
+++ + H+N++ A D +Y+ +E G L + + A+ L ++ + +
Sbjct: 86 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR-PPGLEFSFNPSHNPE 144
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---D 265
+ + KD Q+ R +HRD+ N L ED+ +K DFGL+
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDIH 201
Query: 266 FIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGI 323
I KK + ++APE L R +SDVWS GV+ + I G P+ + +
Sbjct: 202 HIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
Query: 324 FK 325
FK
Sbjct: 262 FK 263
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 68.2 bits (165), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 85/146 (58%), Gaps = 12/146 (8%)
Query: 415 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 474
+E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G +D
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 475 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-----KG 528
F EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 61 FPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 115
Query: 529 SIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 116 EVDEMIREADIDGDGQVNYEEFVQMM 141
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 68.2 bits (165), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 85/146 (58%), Gaps = 12/146 (8%)
Query: 415 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 474
+E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G +D
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 475 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-----KG 528
F EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 63 FPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 117
Query: 529 SIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 118 EVDEMIREADIDGDGQVNYEEFVQMM 143
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 17/209 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY I L+G G FG A D+ + VA+K I+ K L + EV++L+ + H
Sbjct: 36 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFL----NQAQIEVRLLELMNKH 91
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ +K+Y ++++ LC E+L L ++ T L + T K A
Sbjct: 92 DTEMKYYIVHLKRHFMF-RNHLCLVFEMLSYNLYDLLRNTNFRGVSLNL------TRKFA 144
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+ +L +A ++H D+KPEN L + K S++K DFG S + G++
Sbjct: 145 QQMCTALLFLATP--ELSIIHCDLKPENILLCNPKR-SAIKIVDFGSS--CQLGQRIYQX 199
Query: 277 VGSAYYVAPEV-LKRKSGPESDVWSIGVI 304
+ S +Y +PEV L D+WS+G I
Sbjct: 200 IQSRFYRSPEVLLGMPYDLAIDMWSLGCI 228
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 17/209 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY I L+G G FG A D+ + VA+K I+ K L + EV++L+ + H
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFL----NQAQIEVRLLELMNKH 110
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ +K+Y ++++ LC E+L L ++ T L + T K A
Sbjct: 111 DTEMKYYIVHLKRHFMF-RNHLCLVFEMLSYNLYDLLRNTNFRGVSLNL------TRKFA 163
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+ +L +A ++H D+KPEN L + K S++K DFG S + G++
Sbjct: 164 QQMCTALLFLATP--ELSIIHCDLKPENILLCNPKR-SAIKIVDFGSS--CQLGQRIYQX 218
Query: 277 VGSAYYVAPEV-LKRKSGPESDVWSIGVI 304
+ S +Y +PEV L D+WS+G I
Sbjct: 219 IQSRFYRSPEVLLGMPYDLAIDMWSLGCI 247
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 102/252 (40%), Gaps = 61/252 (24%)
Query: 104 LGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
+G G F Y+AT + +++A+K + + IA E ++ L G +NV+
Sbjct: 29 IGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAE-----LQCLTVAGGQDNVM 83
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVV 220
F +++V IAM E LD L S F +R+ +
Sbjct: 84 GVKYCFRKNDHVVIAMPYLEHESFLD---------ILNSLSFQEVRE-----------YM 123
Query: 221 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK----KF--- 273
+ + H G+VHRD+KP NFL+ + +L DFGL+ K KF
Sbjct: 124 LNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYAL--VDFGLAQGTHDTKIELLKFVQS 181
Query: 274 -------------------QDI---VGSAYYVAPEVLKRKSGPES--DVWSIGVITYILL 309
Q + G+ + APEVL + + D+WS GVI LL
Sbjct: 182 EAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLL 241
Query: 310 CGRRPFWDKTED 321
GR PF+ ++D
Sbjct: 242 SGRYPFYKASDD 253
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 107/242 (44%), Gaps = 20/242 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVA----TDKANGDRVAVKKIEKNKMILPIAVE----DVKREVK 148
R +GK LG G FG +A DK +RV + KM+ A E D+ E++
Sbjct: 18 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAV---KMLKSDATEKDLSDLISEME 74
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
+++ + H+N++ A D +Y+ +E G L + + A+ L ++ + +
Sbjct: 75 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR-PPGLEYSYNPSHNPE 133
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---D 265
+ + KD Q+ R +HRD+ N L ED+ +K DFGL+
Sbjct: 134 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDIH 190
Query: 266 FIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGI 323
I KK + ++APE L R +SDVWS GV+ + I G P+ + +
Sbjct: 191 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 250
Query: 324 FK 325
FK
Sbjct: 251 FK 252
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 21/182 (11%)
Query: 389 LNNMRQFVKYSRLKQFALRALASTLDD-EELADLRDQFDAIDVDKNGSISLEEMRQALAK 447
L NM++F +L Q A+ + S L EE +L F +D + +G + +E+ + K
Sbjct: 9 LGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRK 68
Query: 448 DLPWKLK----------ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 497
+ WK E+ V ILQ++D + +G +++SEFV + L +
Sbjct: 69 LMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRE----- 123
Query: 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDP----LLEEADIDKDGRISLSEFRRL 553
R AAF++FD D G IT EEL G+ D +L+E D + DG + EF +
Sbjct: 124 -RLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEM 182
Query: 554 LR 555
++
Sbjct: 183 MQ 184
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 20/242 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVA----TDKANGDRVAVKKIEKNKMILPIAVE----DVKREVK 148
R +GK LG G FG +A DK +RV + KM+ A E D+ E++
Sbjct: 14 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAV---KMLKSDATEKDLSDLISEME 70
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
+++ + H+N++ A D +Y+ +E G L + + A+ L + + +
Sbjct: 71 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR-PPGLEYCYNPSHNPE 129
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---D 265
+ + KD Q+ R +HRD+ N L ED+ +K DFGL+
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDIH 186
Query: 266 FIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGI 323
I KK + ++APE L R +SDVWS GV+ + I G P+ + +
Sbjct: 187 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 246
Query: 324 FK 325
FK
Sbjct: 247 FK 248
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 99/229 (43%), Gaps = 38/229 (16%)
Query: 94 FDRRYTIGKL--LGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
F +RY + K+ LG G FG Y Y T+ G+ VAVK +++ P +RE+
Sbjct: 5 FHKRY-LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEG--CGPQLRSGWQREI 61
Query: 148 KILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAI 205
+IL+ L HE++VK+ ED + V + ME G L D + +
Sbjct: 62 EILRTLY-HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLA--------- 111
Query: 206 RKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 265
+ +Q+ A H +HR + N L + D +K DFGL+
Sbjct: 112 ---------QLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDN---DRLVKIGDFGLAK 159
Query: 266 FIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 309
+ G ++ +D ++ APE LK K SDVWS GV Y LL
Sbjct: 160 AVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 208
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 107/242 (44%), Gaps = 20/242 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVA----TDKANGDRVAVKKIEKNKMILPIAVE----DVKREVK 148
R +GK LG G FG +A DK +RV + KM+ A E D+ E++
Sbjct: 21 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAV---KMLKSDATEKDLSDLISEME 77
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
+++ + H+N++ A D +Y+ +E G L + + A+ L ++ + +
Sbjct: 78 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR-PPGLEYSYNPSHNPE 136
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---D 265
+ + KD Q+ R +HRD+ N L ED+ +K DFGL+
Sbjct: 137 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDIH 193
Query: 266 FIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGI 323
I KK + ++APE L R +SDVWS GV+ + I G P+ + +
Sbjct: 194 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 253
Query: 324 FK 325
FK
Sbjct: 254 FK 255
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 99/229 (43%), Gaps = 38/229 (16%)
Query: 94 FDRRYTIGKL--LGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
F +RY + K+ LG G FG Y Y T+ G+ VAVK +++ P +RE+
Sbjct: 6 FHKRY-LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEG--CGPQLRSGWQREI 62
Query: 148 KILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAI 205
+IL+ L HE++VK+ ED + V + ME G L D + +
Sbjct: 63 EILRTLY-HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLA--------- 112
Query: 206 RKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 265
+ +Q+ A H +HR + N L + D +K DFGL+
Sbjct: 113 ---------QLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDN---DRLVKIGDFGLAK 160
Query: 266 FIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 309
+ G ++ +D ++ APE LK K SDVWS GV Y LL
Sbjct: 161 AVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 209
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 107/242 (44%), Gaps = 20/242 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVA----TDKANGDRVAVKKIEKNKMILPIAVE----DVKREVK 148
R +GK LG G FG +A DK +RV + KM+ A E D+ E++
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAV---KMLKSDATEKDLSDLISEME 85
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
+++ + H+N++ A D +Y+ +E G L + + A+ L ++ + +
Sbjct: 86 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR-PPGLEYSYNPSHNPE 144
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---D 265
+ + KD Q+ R +HRD+ N L ED+ +K DFGL+
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDIH 201
Query: 266 FIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGI 323
I KK + ++APE L R +SDVWS GV+ + I G P+ + +
Sbjct: 202 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
Query: 324 FK 325
FK
Sbjct: 262 FK 263
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 107/242 (44%), Gaps = 20/242 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVA----TDKANGDRVAVKKIEKNKMILPIAVE----DVKREVK 148
R +GK LG G FG +A DK +RV + KM+ A E D+ E++
Sbjct: 22 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAV---KMLKSDATEKDLSDLISEME 78
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
+++ + H+N++ A D +Y+ +E G L + + A+ L ++ + +
Sbjct: 79 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR-PPGLEYSYNPSHNPE 137
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---D 265
+ + KD Q+ R +HRD+ N L ED+ +K DFGL+
Sbjct: 138 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDIH 194
Query: 266 FIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGI 323
I KK + ++APE L R +SDVWS GV+ + I G P+ + +
Sbjct: 195 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 254
Query: 324 FK 325
FK
Sbjct: 255 FK 256
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 110/257 (42%), Gaps = 42/257 (16%)
Query: 72 NSRRQTGVIPCGKRTDFGYDKD-----------FDRRYTIGKLLGHGQFGYTYVATDKAN 120
N++++ G+ G + GYD D RY + K++G G FG A D
Sbjct: 64 NAKKRQGMT--GGPNNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKV 121
Query: 121 GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE-----NVVKFYNAFEDDNYVYIA 175
VA+K + K A E E++IL+ L + NV+ F N++
Sbjct: 122 HQHVALKMVRNEKRFHRQAAE----EIRILEHLRKQDKDNTMNVIHMLENFTFRNHI--- 174
Query: 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGL 235
C ELL L ++I + L + + ++ +L+ H + +
Sbjct: 175 ---CMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHS----------ILQCLDALHKNRI 221
Query: 236 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGP 294
+H D+KPEN L K + S +K DFG S + ++ + S +Y APEV L + G
Sbjct: 222 IHCDLKPENILLKQ-QGRSGIKVIDFGSSCYEH--QRVYTXIQSRFYRAPEVILGARYGM 278
Query: 295 ESDVWSIGVITYILLCG 311
D+WS+G I LL G
Sbjct: 279 PIDMWSLGCILAELLTG 295
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 348 DFVKKLLVKDPRARLTAAQALSHPWVR 374
DF+K+ L DP R+T QAL HPW+R
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 110/257 (42%), Gaps = 42/257 (16%)
Query: 72 NSRRQTGVIPCGKRTDFGYDKD-----------FDRRYTIGKLLGHGQFGYTYVATDKAN 120
N++++ G+ G + GYD D RY + K++G G FG A D
Sbjct: 64 NAKKRQGMT--GGPNNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKV 121
Query: 121 GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE-----NVVKFYNAFEDDNYVYIA 175
VA+K + K A E E++IL+ L + NV+ F N++
Sbjct: 122 HQHVALKMVRNEKRFHRQAAE----EIRILEHLRKQDKDNTMNVIHMLENFTFRNHI--- 174
Query: 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGL 235
C ELL L ++I + L + + ++ +L+ H + +
Sbjct: 175 ---CMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHS----------ILQCLDALHKNRI 221
Query: 236 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGP 294
+H D+KPEN L K + S +K DFG S + ++ + S +Y APEV L + G
Sbjct: 222 IHCDLKPENILLKQ-QGRSGIKVIDFGSSCYEH--QRVYXXIQSRFYRAPEVILGARYGM 278
Query: 295 ESDVWSIGVITYILLCG 311
D+WS+G I LL G
Sbjct: 279 PIDMWSLGCILAELLTG 295
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 348 DFVKKLLVKDPRARLTAAQALSHPWVR 374
DF+K+ L DP R+T QAL HPW+R
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 107/242 (44%), Gaps = 20/242 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVA----TDKANGDRVAVKKIEKNKMILPIAVE----DVKREVK 148
R +GK LG G FG +A DK +RV + KM+ A E D+ E++
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAV---KMLKSDATEKDLSDLISEME 85
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
+++ + H+N++ A D +Y+ +E G L + + A+ L ++ + +
Sbjct: 86 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARE-PPGLEYSYNPSHNPE 144
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---D 265
+ + KD Q+ R +HRD+ N L ED+ +K DFGL+
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDIH 201
Query: 266 FIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGI 323
I KK + ++APE L R +SDVWS GV+ + I G P+ + +
Sbjct: 202 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
Query: 324 FK 325
FK
Sbjct: 262 FK 263
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 110/257 (42%), Gaps = 42/257 (16%)
Query: 72 NSRRQTGVIPCGKRTDFGYDKD-----------FDRRYTIGKLLGHGQFGYTYVATDKAN 120
N++++ G+ G + GYD D RY + K++G G FG A D
Sbjct: 64 NAKKRQGMT--GGPNNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKV 121
Query: 121 GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE-----NVVKFYNAFEDDNYVYIA 175
VA+K + K A E E++IL+ L + NV+ F N++
Sbjct: 122 HQHVALKMVRNEKRFHRQAAE----EIRILEHLRKQDKDNTMNVIHMLENFTFRNHI--- 174
Query: 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGL 235
C ELL L ++I + L + + ++ +L+ H + +
Sbjct: 175 ---CMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHS----------ILQCLDALHKNRI 221
Query: 236 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGP 294
+H D+KPEN L K + S +K DFG S + ++ + S +Y APEV L + G
Sbjct: 222 IHCDLKPENILLKQ-QGRSGIKVIDFGSSCY--EHQRVYTXIQSRFYRAPEVILGARYGM 278
Query: 295 ESDVWSIGVITYILLCG 311
D+WS+G I LL G
Sbjct: 279 PIDMWSLGCILAELLTG 295
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 348 DFVKKLLVKDPRARLTAAQALSHPWVR 374
DF+K+ L DP R+T QAL HPW+R
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 18/241 (7%)
Query: 97 RYTIGKLLGHGQFGYTYVA------TDKAN-GDRVAVKKIEKNKMILPIAVEDVKREVKI 149
R +GK LG G FG +A DK N +VAVK ++ + ++ D+ E+++
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS--DLISEMEM 86
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
++ + H+N++ A D +Y+ +E G L + + A+ L + + +
Sbjct: 87 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR-PPGLEYCYNPSHNPEE 145
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DF 266
+ + KD Q+ R +HRD+ N L ED+ +K DFGL+
Sbjct: 146 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDIHH 202
Query: 267 IKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIF 324
I KK + ++APE L R +SDVWS GV+ + I G P+ + +F
Sbjct: 203 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
Query: 325 K 325
K
Sbjct: 263 K 263
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 124/319 (38%), Gaps = 76/319 (23%)
Query: 86 TDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR 145
T + DK F + +L+G G FG + A + +G +++++ N E +R
Sbjct: 2 TKYTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN-------EKAER 54
Query: 146 EVKILQALAGHENVVKFYNAFEDDNY-----------------------------VYIAM 176
EVK L L H N+V + ++ +Y ++I M
Sbjct: 55 EVKALAKL-DHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQM 113
Query: 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 236
E C+ G L W + R+ + + A + Q+ + H L+
Sbjct: 114 EFCDKGTL--------------EQW-IEKRRGEKLDKVLALELFEQITKGVDYIHSKKLI 158
Query: 237 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPE 295
HRD+KP N K+ +K DFGL +K K G+ Y++PE + + G E
Sbjct: 159 HRDLKPSNIFLVDTKQ---VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKE 215
Query: 296 SDVWSIGVITYILL--CG----RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 349
D++++G+I LL C F+ DGI ++ K K
Sbjct: 216 VDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDKK--------------EKTL 261
Query: 350 VKKLLVKDPRARLTAAQAL 368
++KLL K P R ++ L
Sbjct: 262 LQKLLSKKPEDRPNTSEIL 280
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 107/242 (44%), Gaps = 20/242 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVA----TDKANGDRVAVKKIEKNKMILPIAVE----DVKREVK 148
R +GK LG G FG +A DK +RV + KM+ A E D+ E++
Sbjct: 70 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAV---KMLKSDATEKDLSDLISEME 126
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
+++ + H+N++ A D +Y+ +E G L + + A+ L ++ + +
Sbjct: 127 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR-PPGLEYSYNPSHNPE 185
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---D 265
+ + KD Q+ R +HRD+ N L ED+ +K DFGL+
Sbjct: 186 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDIH 242
Query: 266 FIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGI 323
I KK + ++APE L R +SDVWS GV+ + I G P+ + +
Sbjct: 243 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 302
Query: 324 FK 325
FK
Sbjct: 303 FK 304
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 67.0 bits (162), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 85/153 (55%), Gaps = 14/153 (9%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 526
+G +DF EF+ T+ ++++ + E + AF FD D +GFI+ ELR + T L
Sbjct: 60 NGTIDFPEFL--TMMARKMKDSEEE-----IREAFRVFDKDGNGFISAAELRHVMTNLGE 112
Query: 527 ---KGSIDPLLEEADIDKDGRISLSEFRRLLRT 556
+D ++ EADID DG+++ EF ++ +
Sbjct: 113 KLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 145
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 66.6 bits (161), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 85/146 (58%), Gaps = 13/146 (8%)
Query: 415 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 474
+E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G +D
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 475 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-----KG 528
F EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 61 FPEFL--TMMARKMKDTDSEE----IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 114
Query: 529 SIDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EA+ID DG+++ EF +++
Sbjct: 115 EVDEMIREANIDGDGQVNYEEFVQMM 140
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 13/155 (8%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
+S L +E++A+ ++ F D D NGSIS E+ + + L E+ V +++ ID +
Sbjct: 2 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVM-RSLGLSPSEAEVNDLMNEIDVDG 60
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 526
+ ++FSEF+A L QL+ +DSE+ L AF+ FD + DG I+ EL+ G
Sbjct: 61 NHQIEFSEFLA--LMSRQLKSNDSEQELLE---AFKVFDKNGDGLISAAELKHVLTSIGE 115
Query: 527 K---GSIDPLLEEADIDKDGRISLSEFRRLLRTAS 558
K +D +L E D G I++ +F LL S
Sbjct: 116 KLTDAEVDDMLREVS-DGSGEINIQQFAALLSKGS 149
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 101/230 (43%), Gaps = 35/230 (15%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y +G+ +G G FG + T+ N +VA+K E + P + D R K+L G
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIK-FEPRRSDAP-QLRDEYRTYKLLAGCTGIP 69
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILA-KMISTTLTSAWFLAIRKDSRYTEKDA 216
NV F G E L +L ++ +L L RK ++ K
Sbjct: 70 NVYYF------------------GQEGLHNVLVIDLLGPSLEDLLDLCGRK---FSVKTV 108
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDSSLKATDFGLSDFIK------ 268
A+ +QML H LV+RD+KP+NFL ++K + + DFG+ F +
Sbjct: 109 AMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQ 168
Query: 269 --PGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF 315
P ++ +++ G+A Y++ L R+ D+ ++G + L G P+
Sbjct: 169 HIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 218
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 17/209 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY I L+G G FG A D+ + VA+K I+ K L + EV++L+ + H
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFL----NQAQIEVRLLELMNKH 110
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ +K+Y ++++ LC E+L L ++ T L + T K A
Sbjct: 111 DTEMKYYIVHLKRHFMF-RNHLCLVFEMLSYNLYDLLRNTNFRGVSLNL------TRKFA 163
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+ +L +A ++H D+KPEN L + K ++K DFG S + G++
Sbjct: 164 QQMCTALLFLATP--ELSIIHCDLKPENILLCNPKR-XAIKIVDFGSS--CQLGQRIYQX 218
Query: 277 VGSAYYVAPEV-LKRKSGPESDVWSIGVI 304
+ S +Y +PEV L D+WS+G I
Sbjct: 219 IQSRFYRSPEVLLGMPYDLAIDMWSLGCI 247
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 101/230 (43%), Gaps = 35/230 (15%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y +G+ +G G FG + T+ N +VA+K E + P + D R K+L G
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIK-FEPRRSDAP-QLRDEYRTYKLLAGCTGIP 68
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILA-KMISTTLTSAWFLAIRKDSRYTEKDA 216
NV F G E L +L ++ +L L RK ++ K
Sbjct: 69 NVYYF------------------GQEGLHNVLVIDLLGPSLEDLLDLCGRK---FSVKTV 107
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDSSLKATDFGLSDFIK------ 268
A+ +QML H LV+RD+KP+NFL ++K + + DFG+ F +
Sbjct: 108 AMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQ 167
Query: 269 --PGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF 315
P ++ +++ G+A Y++ L R+ D+ ++G + L G P+
Sbjct: 168 HIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 217
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 121/298 (40%), Gaps = 49/298 (16%)
Query: 90 YDKDFDRRYT-IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKR 145
+ K+ D Y I +++G G+FG KA G + VA+K ++ E +R
Sbjct: 7 FAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGY------TERQRR 60
Query: 146 EVKILQALAG---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWF 202
E ++ G H N+++ + V I E E G L F
Sbjct: 61 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS---------------F 105
Query: 203 LAIRKDSRYTEKDAAVVVRQM---LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259
L + D ++T ++R + +R AE VHRD+ N L S + K +
Sbjct: 106 LRL-NDGQFTVIQLVGMLRGIASGMRYLAE---MSYVHRDLAARNILVNS---NLVCKVS 158
Query: 260 DFGLSDFIKPGKK---FQDIVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCG 311
DFGLS F++ + +G + APE + RK SD WS G++ + ++ G
Sbjct: 159 DFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFG 218
Query: 312 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369
RP+WD + + + + D+R P P S + KD AR Q +S
Sbjct: 219 ERPYWDMSNQDVINAI---EQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVS 273
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 29/251 (11%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEKD 83
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTS 199
D+ E+++++ + H+N++ A D +Y+ +E G L + + A+ +
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR-PPGMEX 142
Query: 200 AWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259
++ + + + T KD Q+ R +HRD+ N L E++ +K
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIA 199
Query: 260 DFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRP 314
DFGL+ + I KK + ++APE L R +SDVWS GV+ + I G P
Sbjct: 200 DFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 315 FWDKTEDGIFK 325
+ + +FK
Sbjct: 260 YPGIPVEELFK 270
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 38/229 (16%)
Query: 94 FDRRYTIGKL--LGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
F +RY + K+ LG G FG Y Y T+ G+ VAVK ++ + P K+E+
Sbjct: 11 FHKRY-LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--CGPQHRSGWKQEI 67
Query: 148 KILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAI 205
IL+ L HE+++K+ ED + + + ME G L D + I
Sbjct: 68 DILRTLY-HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLA--------- 117
Query: 206 RKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 265
+ +Q+ A H +HR++ N L + D +K DFGL+
Sbjct: 118 ---------QLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDN---DRLVKIGDFGLAK 165
Query: 266 FIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 309
+ G ++ +D ++ APE LK K SDVWS GV Y LL
Sbjct: 166 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 29/251 (11%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEKD 83
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTS 199
D+ E+++++ + H+N++ A D +Y+ +E G L + + A+ +
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR-PPGMEY 142
Query: 200 AWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259
++ + + + T KD Q+ R +HRD+ N L E++ +K
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIA 199
Query: 260 DFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRP 314
DFGL+ + I KK + ++APE L R +SDVWS GV+ + I G P
Sbjct: 200 DFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 315 FWDKTEDGIFK 325
+ + +FK
Sbjct: 260 YPGIPVEELFK 270
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 65.1 bits (157), Expect = 9e-11, Method: Composition-based stats.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 21/153 (13%)
Query: 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 468
+ S D +E+ L +F +D+D +GS+S+EE LP + V ++ D +
Sbjct: 11 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-----LPELQQNPLVQRVIDIFDTD 65
Query: 469 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE----LRMHT 524
+G VDF EF+ V Q ++ LR AF +D+D+DG+I+ E L+M
Sbjct: 66 GNGEVDFKEFIEG---VSQFSVKGDKEQKLR--FAFRIYDMDKDGYISNGELFQVLKMMV 120
Query: 525 G-------LKGSIDPLLEEADIDKDGRISLSEF 550
G L+ +D + AD D DGRIS EF
Sbjct: 121 GNNLKDTQLQQIVDKTIINADKDGDGRISFEEF 153
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 38/229 (16%)
Query: 94 FDRRYTIGKL--LGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
F +RY + K+ LG G FG Y Y T+ G+ VAVK ++ + P K+E+
Sbjct: 11 FHKRY-LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--CGPQHRSGWKQEI 67
Query: 148 KILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAI 205
IL+ L HE+++K+ ED + + + ME G L D + I
Sbjct: 68 DILRTLY-HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLA--------- 117
Query: 206 RKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 265
+ +Q+ A H +HR++ N L + D +K DFGL+
Sbjct: 118 ---------QLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDN---DRLVKIGDFGLAK 165
Query: 266 FIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 309
+ G ++ +D ++ APE LK K SDVWS GV Y LL
Sbjct: 166 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 119/298 (39%), Gaps = 49/298 (16%)
Query: 90 YDKDFDRRYT-IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKR 145
+ K+ D Y I +++G G+FG KA G + VA+K ++ E +R
Sbjct: 9 FAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGY------TERQRR 62
Query: 146 EVKILQALAG---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWF 202
E ++ G H N+++ + V I E E G L F
Sbjct: 63 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS---------------F 107
Query: 203 LAIRKDSRYTEKDAAVVVRQM---LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259
L + D ++T ++R + +R AE VHRD+ N L S + K +
Sbjct: 108 LRL-NDGQFTVIQLVGMLRGIASGMRYLAE---MSYVHRDLAARNILVNS---NLVCKVS 160
Query: 260 DFGLSDFIKPGKKFQDIVGS------AYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCG 311
DFGLS F++ S + APE + RK SD WS G++ + ++ G
Sbjct: 161 DFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFG 220
Query: 312 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369
RP+WD + + + + D+R P P S + KD AR Q +S
Sbjct: 221 ERPYWDMSNQDVINAI---EQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVS 275
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 29/251 (11%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEKD 83
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTS 199
D+ E+++++ + H+N++ A D +Y+ +E G L + + A+ +
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR-PPGMEY 142
Query: 200 AWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259
++ + + + T KD Q+ R +HRD+ N L E++ +K
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIA 199
Query: 260 DFGLSDFIKPGKKFQDIVGS---AYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRP 314
DFGL+ I +++ ++APE L R +SDVWS GV+ + I G P
Sbjct: 200 DFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 315 FWDKTEDGIFK 325
+ + +FK
Sbjct: 260 YPGIPVEELFK 270
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 64.7 bits (156), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 21/153 (13%)
Query: 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 468
+ S D +E+ L +F +D+D +GS+S+EE LP + V ++ D +
Sbjct: 10 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-----LPELQQNPLVQRVIDIFDTD 64
Query: 469 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE----LRMHT 524
+G VDF EF+ V Q ++ LR AF +D+D+DG+I+ E L+M
Sbjct: 65 GNGEVDFKEFIEG---VSQFSVKGDKEQKLR--FAFRIYDMDKDGYISNGELFQVLKMMV 119
Query: 525 G-------LKGSIDPLLEEADIDKDGRISLSEF 550
G L+ +D + AD D DGRIS EF
Sbjct: 120 GNNLKDTQLQQIVDKTIINADKDGDGRISFEEF 152
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 122/297 (41%), Gaps = 50/297 (16%)
Query: 89 GYDKDFD---RRYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKMILPIAVEDV 143
G +D++ R +G+ +G GQFG + + N K KN D
Sbjct: 3 GSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN------CTSDS 56
Query: 144 KREVKILQALA----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTS 199
RE + +AL H ++VK +N V+I MELC GEL
Sbjct: 57 VREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS------------- 102
Query: 200 AWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLK 257
FL +RK Y+ A++++ A +L VHRD+ N L S + +K
Sbjct: 103 --FLQVRK---YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVK 154
Query: 258 ATDFGLSDFIKPGKKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRR 313
DFGLS +++ ++ G ++APE + R+ SDVW GV + IL+ G +
Sbjct: 155 LGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 214
Query: 314 PFWDKTEDGIFKEVLRNKPDFRRKPW-PSISNSAKDFVKKLLVKDP--RARLTAAQA 367
PF + + + + R P P+ + + K DP R R T +A
Sbjct: 215 PFQGVKNNDVIGRIENGE----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 267
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 32/242 (13%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV 140
P G+R Y + + +G G FG Y K +GD VAVK I K P
Sbjct: 21 PRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVY--KGKWHGD-VAVK-ILKVVDPTPEQF 76
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSA 200
+ + EV +L+ H N++ F DN + I + CEG L + +
Sbjct: 77 QAFRNEVAVLRK-TRHVNILLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQ--------- 125
Query: 201 WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
++++ + RQ + H ++HRDMK N E ++K D
Sbjct: 126 -------ETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH---EGLTVKIGD 175
Query: 261 FGLSDFIKPGKKFQDI---VGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRR 313
FGL+ Q + GS ++APEV++ + + P +SDV+S G++ Y L+ G
Sbjct: 176 FGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGEL 235
Query: 314 PF 315
P+
Sbjct: 236 PY 237
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 117/286 (40%), Gaps = 47/286 (16%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
R +G+ +G GQFG + + N K KN D RE + +AL
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN------CTSDSVREKFLQEALT 64
Query: 155 ----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
H ++VK +N V+I MELC GEL FL +RK
Sbjct: 65 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS---------------FLQVRK--- 105
Query: 211 YTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
Y+ A++++ A +L VHRD+ N L S + +K DFGLS +++
Sbjct: 106 YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYME 162
Query: 269 PGKKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIF 324
++ G ++APE + R+ SDVW GV + IL+ G +PF + +
Sbjct: 163 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
Query: 325 KEVLRNKPDFRRKPW-PSISNSAKDFVKKLLVKDP--RARLTAAQA 367
+ + R P P+ + + K DP R R T +A
Sbjct: 223 GRIENGE----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 29/251 (11%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 77 EFPRDKLTLGKPLGEGCFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEKD 129
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTS 199
D+ E+++++ + H+N++ A D +Y+ +E G L + + A+ +
Sbjct: 130 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR-PPGMEY 188
Query: 200 AWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259
++ + + + T KD Q+ R +HRD+ N L E++ +K
Sbjct: 189 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIA 245
Query: 260 DFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRP 314
DFGL+ + I KK + ++APE L R +SDVWS GV+ + I G P
Sbjct: 246 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305
Query: 315 FWDKTEDGIFK 325
+ + +FK
Sbjct: 306 YPGIPVEELFK 316
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 28/187 (14%)
Query: 384 IDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQ 443
IDI VL N + + R ++ A+ +A +D ++ L+ F +D + G+I+ ++R+
Sbjct: 20 IDIHVLENFKNYALMLRFQKLAMTIIAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRK 79
Query: 444 ALAKD---LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS 500
L + LP +L ID + G +D++EF+AA + QL S+K
Sbjct: 80 GLERSGLMLPPNFDL-----LLDQIDSDGSGNIDYTEFLAAAIDRRQL----SKKL---I 127
Query: 501 QAAFEKFDIDRDGFITPEELRMHTGLKGS------------IDPLLEEADIDKDGRISLS 548
AF FD+D DG IT EL H G+ + ++ E D + DG+I
Sbjct: 128 YCAFRVFDVDNDGEITTAEL-AHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFY 186
Query: 549 EFRRLLR 555
EF +++
Sbjct: 187 EFSEMMK 193
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
+S L +E++A+ ++ F D D NGSIS E+ + + L E+ V +++ ID +
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVM-RSLGLSPSEAEVNDLMNEIDVDG 59
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 526
+ ++FSEF+A L QL+ +DSE+ L AF+ FD + DG I+ EL+ G
Sbjct: 60 NHQIEFSEFLA--LMSRQLKSNDSEQELLE---AFKVFDKNGDGLISAAELKHVLTSIGE 114
Query: 527 K---GSIDPLLEEADIDKDGRISLSEFRRLL 554
K +D +L E D G I++ +F LL
Sbjct: 115 KLTDAEVDDMLREVS-DGSGEINIQQFAALL 144
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 117/286 (40%), Gaps = 47/286 (16%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
R +G+ +G GQFG + + N K KN D RE + +AL
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN------CTSDSVREKFLQEALT 64
Query: 155 ----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
H ++VK +N V+I MELC GEL FL +RK
Sbjct: 65 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS---------------FLQVRK--- 105
Query: 211 YTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
Y+ A++++ A +L VHRD+ N L S + +K DFGLS +++
Sbjct: 106 YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYME 162
Query: 269 PGKKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIF 324
++ G ++APE + R+ SDVW GV + IL+ G +PF + +
Sbjct: 163 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
Query: 325 KEVLRNKPDFRRKPW-PSISNSAKDFVKKLLVKDP--RARLTAAQA 367
+ + R P P+ + + K DP R R T +A
Sbjct: 223 GRIENGE----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 29/251 (11%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEED 83
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTS 199
D+ E+++++ + H+N++ A D +Y+ +E G L + + A+ +
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR-PPGMEY 142
Query: 200 AWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259
++ + + + T KD Q+ R +HRD+ N L E++ +K
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIA 199
Query: 260 DFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRP 314
DFGL+ + I KK + ++APE L R +SDVWS GV+ + I G P
Sbjct: 200 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 315 FWDKTEDGIFK 325
+ + +FK
Sbjct: 260 YPGIPVEELFK 270
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 112/271 (41%), Gaps = 46/271 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 26 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 78
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV-VVR 221
Y ++ +YI ME G LLD + +M +Y V +
Sbjct: 79 YAVVSEEP-IYIVMEYMSKGCLLDFLKGEM----------------GKYLRLPQLVDMAA 121
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQ 274
Q+ A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF- 177
Query: 275 DIVGSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R
Sbjct: 178 ----PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-- 231
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLT 363
+R P S D + + KDP R T
Sbjct: 232 -YRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 93 DFDRR--YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----E 146
+FD R G G G FG Y N VAVKK+ ++ I E++K+ E
Sbjct: 17 NFDERPISVGGNKXGEGGFGVVYKGY--VNNTTVAVKKL---AAMVDITTEELKQQFDQE 71
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
+K+ A HEN+V+ D + + + G LLDR+ + T +W +
Sbjct: 72 IKV-XAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL--SCLDGTPPLSWHXRCK 128
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ AA + + H + +HRD+K N L A + K +DFGL+
Sbjct: 129 -----IAQGAANGINFL-------HENHHIHRDIKSANILLDEA---FTAKISDFGLA-- 171
Query: 267 IKPGKKFQD------IVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCG 311
+ +KF IVG+ Y APE L+ + P+SD++S GV+ ++ G
Sbjct: 172 -RASEKFAQXVXXSRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 117/286 (40%), Gaps = 47/286 (16%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
R +G+ +G GQFG + + N K KN D RE + +AL
Sbjct: 39 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN------CTSDSVREKFLQEALT 92
Query: 155 ----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
H ++VK +N V+I MELC GEL FL +RK
Sbjct: 93 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS---------------FLQVRK--- 133
Query: 211 YTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
Y+ A++++ A +L VHRD+ N L S + +K DFGLS +++
Sbjct: 134 YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYME 190
Query: 269 PGKKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIF 324
++ G ++APE + R+ SDVW GV + IL+ G +PF + +
Sbjct: 191 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 250
Query: 325 KEVLRNKPDFRRKPW-PSISNSAKDFVKKLLVKDP--RARLTAAQA 367
+ + R P P+ + + K DP R R T +A
Sbjct: 251 GRIENGE----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 292
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 117/286 (40%), Gaps = 47/286 (16%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
R +G+ +G GQFG + + N K KN D RE + +AL
Sbjct: 8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN------CTSDSVREKFLQEALT 61
Query: 155 ----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
H ++VK +N V+I MELC GEL FL +RK
Sbjct: 62 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS---------------FLQVRK--- 102
Query: 211 YTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
Y+ A++++ A +L VHRD+ N L S + +K DFGLS +++
Sbjct: 103 YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYME 159
Query: 269 PGKKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIF 324
++ G ++APE + R+ SDVW GV + IL+ G +PF + +
Sbjct: 160 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 219
Query: 325 KEVLRNKPDFRRKPW-PSISNSAKDFVKKLLVKDP--RARLTAAQA 367
+ + R P P+ + + K DP R R T +A
Sbjct: 220 GRIENGE----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 261
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 117/286 (40%), Gaps = 47/286 (16%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
R +G+ +G GQFG + + N K KN D RE + +AL
Sbjct: 13 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN------CTSDSVREKFLQEALT 66
Query: 155 ----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
H ++VK +N V+I MELC GEL FL +RK
Sbjct: 67 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS---------------FLQVRK--- 107
Query: 211 YTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
Y+ A++++ A +L VHRD+ N L S + +K DFGLS +++
Sbjct: 108 YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYME 164
Query: 269 PGKKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIF 324
++ G ++APE + R+ SDVW GV + IL+ G +PF + +
Sbjct: 165 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 224
Query: 325 KEVLRNKPDFRRKPW-PSISNSAKDFVKKLLVKDP--RARLTAAQA 367
+ + R P P+ + + K DP R R T +A
Sbjct: 225 GRIENGE----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 266
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 117/286 (40%), Gaps = 47/286 (16%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
R +G+ +G GQFG + + N K KN D RE + +AL
Sbjct: 16 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN------CTSDSVREKFLQEALT 69
Query: 155 ----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
H ++VK +N V+I MELC GEL FL +RK
Sbjct: 70 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS---------------FLQVRK--- 110
Query: 211 YTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
Y+ A++++ A +L VHRD+ N L S + +K DFGLS +++
Sbjct: 111 YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYME 167
Query: 269 PGKKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIF 324
++ G ++APE + R+ SDVW GV + IL+ G +PF + +
Sbjct: 168 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 227
Query: 325 KEVLRNKPDFRRKPW-PSISNSAKDFVKKLLVKDP--RARLTAAQA 367
+ + R P P+ + + K DP R R T +A
Sbjct: 228 GRIENGE----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 269
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 97/229 (42%), Gaps = 38/229 (16%)
Query: 94 FDRRYTIGKL--LGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
F +RY + K+ LG G FG Y Y T+ G+ VAVK ++ + P K+E+
Sbjct: 28 FHKRY-LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAG--PQHRSGWKQEI 84
Query: 148 KILQALAGHENVVKFYNAFEDDNY--VYIAMELCEGGELLDRILAKMISTTLTSAWFLAI 205
IL+ L HE+++K+ ED + + ME G L D + I
Sbjct: 85 DILRTLY-HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLA--------- 134
Query: 206 RKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 265
+ +Q+ A H +HRD+ N L + D +K DFGL+
Sbjct: 135 ---------QLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDN---DRLVKIGDFGLAK 182
Query: 266 FIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 309
+ G + +D ++ APE LK K SDVWS GV Y LL
Sbjct: 183 AVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 29/251 (11%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEKD 83
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTS 199
D+ E+++++ + H+N++ A D +Y+ +E G L + + A+ +
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARR-PPGMEY 142
Query: 200 AWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259
++ + + + T KD Q+ R +HRD+ N L E++ +K
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIA 199
Query: 260 DFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRP 314
DFGL+ + I KK + ++APE L R +SDVWS GV+ + I G P
Sbjct: 200 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 315 FWDKTEDGIFK 325
+ + +FK
Sbjct: 260 YPGIPVEELFK 270
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 29/251 (11%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 20 EFPRDKLTLGKPLGEGCFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEKD 72
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTS 199
D+ E+++++ + H+N++ A D +Y+ +E G L + + A+ +
Sbjct: 73 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR-PPGMEY 131
Query: 200 AWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259
++ + + + T KD Q+ R +HRD+ N L E++ +K
Sbjct: 132 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIA 188
Query: 260 DFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRP 314
DFGL+ + I KK + ++APE L R +SDVWS GV+ + I G P
Sbjct: 189 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 248
Query: 315 FWDKTEDGIFK 325
+ + +FK
Sbjct: 249 YPGIPVEELFK 259
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 29/251 (11%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEKD 83
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTS 199
D+ E+++++ + H+N++ A D +Y+ +E G L + + A+ +
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARR-PPGMEY 142
Query: 200 AWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259
++ + + + T KD Q+ R +HRD+ N L E++ +K
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIA 199
Query: 260 DFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRP 314
DFGL+ + I KK + ++APE L R +SDVWS GV+ + I G P
Sbjct: 200 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 315 FWDKTEDGIFK 325
+ + +FK
Sbjct: 260 YPGIPVEELFK 270
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 29/251 (11%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 18 EFPRDKLTLGKPLGEGCFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEKD 70
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTS 199
D+ E+++++ + H+N++ A D +Y+ +E G L + + A+ +
Sbjct: 71 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR-PPGMEY 129
Query: 200 AWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259
++ + + + T KD Q+ R +HRD+ N L E++ +K
Sbjct: 130 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVL---VTENNVMKIA 186
Query: 260 DFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRP 314
DFGL+ + I KK + ++APE L R +SDVWS GV+ + I G P
Sbjct: 187 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 246
Query: 315 FWDKTEDGIFK 325
+ + +FK
Sbjct: 247 YPGIPVEELFK 257
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 140/363 (38%), Gaps = 81/363 (22%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV 140
P G F + D RY + + LG G F ++A D N VA+K + +K +
Sbjct: 4 PGGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK----VYT 59
Query: 141 EDVKREVKILQAL----------AGHENVVKFYNAF--EDDNYVYIAMELCEGGELLDRI 188
E + E+K+LQ + G +++K + F + N V++ M GE L +
Sbjct: 60 EAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLAL 119
Query: 189 LAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLF 247
+ K + + I K Q+L H G++H D+KPEN L
Sbjct: 120 IKKYEHRGIPLIYVKQISK--------------QLLLGLDYMHRRCGIIHTDIKPENVLM 165
Query: 248 KSAKEDSSL---KATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGV 303
+ +L K D G + + + + + + + Y +PEV L G +D+WS
Sbjct: 166 EIVDSPENLIQIKIADLGNACWYD--EHYTNSIQTREYRSPEVLLGAPWGCGADIWSTAC 223
Query: 304 ITYILLCGRRPF-------WDKTEDGIFK--EVLRNKPDF-------------------- 334
+ + L+ G F + K +D I + E+L P +
Sbjct: 224 LIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRN 283
Query: 335 --RRKPWP-------------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379
+ K WP + DF+ +L DPR R A ++HPW+++
Sbjct: 284 ISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGM 343
Query: 380 SEI 382
EI
Sbjct: 344 EEI 346
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 29/251 (11%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 23 EFPRDKLTLGKPLGEGCFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEKD 75
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTS 199
D+ E+++++ + H+N++ A D +Y+ +E G L + + A+ +
Sbjct: 76 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR-PPGMEY 134
Query: 200 AWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259
++ + + + T KD Q+ R +HRD+ N L E++ +K
Sbjct: 135 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIA 191
Query: 260 DFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRP 314
DFGL+ + I KK + ++APE L R +SDVWS GV+ + I G P
Sbjct: 192 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 251
Query: 315 FWDKTEDGIFK 325
+ + +FK
Sbjct: 252 YPGIPVEELFK 262
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 63.5 bits (153), Expect = 3e-10, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 21/149 (14%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
+D +E+ L +F +D+D +GS+S+EE LP + V ++ D + +G
Sbjct: 1 MDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-----LPELQQNPLVQRVIDIFDTDGNGE 55
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE----LRMHTG--- 525
VDF EF+ V Q ++ LR AF +D+D+DG+I+ E L+M G
Sbjct: 56 VDFKEFIEG---VSQFSVKGDKEQKLR--FAFRIYDMDKDGYISNGELFQVLKMMVGNNL 110
Query: 526 ----LKGSIDPLLEEADIDKDGRISLSEF 550
L+ +D + AD D DGRIS EF
Sbjct: 111 KDTQLQQIVDKTIINADKDGDGRISFEEF 139
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 112/271 (41%), Gaps = 46/271 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 26 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 78
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV-VVR 221
Y ++ +YI +E G LLD + +M +Y V +
Sbjct: 79 YAVVSEEP-IYIVIEYMSKGSLLDFLKGEM----------------GKYLRLPQLVDMAA 121
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQ 274
Q+ A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEXTARQGAKF- 177
Query: 275 DIVGSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R
Sbjct: 178 ----PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-- 231
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLT 363
+R P S D + + KDP R T
Sbjct: 232 -YRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ----ALAG 155
+ +++G G FG V K VA+K+IE + +R+ I++ +
Sbjct: 12 VEEVVGRGAFGV--VCKAKWRAKDVAIKQIES----------ESERKAFIVELRQLSRVN 59
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
H N+VK Y A N V + ME EGG L + ++ ++ A S +
Sbjct: 60 HPNIVKLYGACL--NPVCLVMEYAEGGSLYN-----VLHGAEPLPYYTAAHAMSWCLQCS 112
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
V ++ A L+HRD+KP N L + + LK DFG + I+ +
Sbjct: 113 QGVAYLHSMQPKA------LIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQ--THMTN 162
Query: 276 IVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPF 315
GSA ++APEV + + E DV+S G+I + ++ R+PF
Sbjct: 163 NKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 203
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 112/271 (41%), Gaps = 46/271 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 26 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 78
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV-VVR 221
Y ++ +YI +E G LLD + +M +Y V +
Sbjct: 79 YAVVSEEP-IYIVIEYMSKGSLLDFLKGEM----------------GKYLRLPQLVDMAA 121
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQ 274
Q+ A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF- 177
Query: 275 DIVGSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R
Sbjct: 178 ----PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-- 231
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLT 363
+R P S D + + KDP R T
Sbjct: 232 -YRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 117/286 (40%), Gaps = 47/286 (16%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
R +G+ +G GQFG + + N K KN D RE + +AL
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN------CTSDSVREKFLQEALT 444
Query: 155 ----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
H ++VK +N V+I MELC GEL FL +RK
Sbjct: 445 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS---------------FLQVRK--- 485
Query: 211 YTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
++ A++++ A +L VHRD+ N L S + +K DFGLS +++
Sbjct: 486 FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYME 542
Query: 269 PGKKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIF 324
++ G ++APE + R+ SDVW GV + IL+ G +PF + +
Sbjct: 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 602
Query: 325 KEVLRNKPDFRRKPW-PSISNSAKDFVKKLLVKDP--RARLTAAQA 367
+ + R P P+ + + K DP R R T +A
Sbjct: 603 GRIENGE----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 644
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 113/251 (45%), Gaps = 29/251 (11%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEKD 83
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTS 199
D+ E+++++ + H+N++ A D +Y+ +E G L + + A+ +
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR-PPGMEY 142
Query: 200 AWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259
++ + + + T KD Q+ R +HRD+ N L E++ ++
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMRIA 199
Query: 260 DFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRP 314
DFGL+ + I KK + ++APE L R +SDVWS GV+ + I G P
Sbjct: 200 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 315 FWDKTEDGIFK 325
+ + +FK
Sbjct: 260 YPGIPVEELFK 270
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ----ALAG 155
+ +++G G FG V K VA+K+IE + +R+ I++ +
Sbjct: 13 VEEVVGRGAFGV--VCKAKWRAKDVAIKQIES----------ESERKAFIVELRQLSRVN 60
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
H N+VK Y A N V + ME EGG L + ++ ++ A S +
Sbjct: 61 HPNIVKLYGACL--NPVCLVMEYAEGGSLYN-----VLHGAEPLPYYTAAHAMSWCLQCS 113
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
V ++ A L+HRD+KP N L + + LK DFG + I+ +
Sbjct: 114 QGVAYLHSMQPKA------LIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQ--THMTN 163
Query: 276 IVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPF 315
GSA ++APEV + + E DV+S G+I + ++ R+PF
Sbjct: 164 NKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 204
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 140/363 (38%), Gaps = 81/363 (22%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV 140
P G F + D RY + + LG G F ++A D N VA+K + +K +
Sbjct: 4 PGGFHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK----VYT 59
Query: 141 EDVKREVKILQAL----------AGHENVVKFYNAF--EDDNYVYIAMELCEGGELLDRI 188
E + E+K+LQ + G +++K + F + N V++ M GE L +
Sbjct: 60 EAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLAL 119
Query: 189 LAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLF 247
+ K + + I K Q+L H G++H D+KPEN L
Sbjct: 120 IKKYEHRGIPLIYVKQISK--------------QLLLGLDYMHRRCGIIHTDIKPENVLM 165
Query: 248 KSAKEDSSL---KATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGV 303
+ +L K D G + + + + + + + Y +PEV L G +D+WS
Sbjct: 166 EIVDSPENLIQIKIADLGNACWYD--EHYTNSIQTREYRSPEVLLGAPWGCGADIWSTAC 223
Query: 304 ITYILLCGRRPF-------WDKTEDGIFK--EVLRNKPDF-------------------- 334
+ + L+ G F + K +D I + E+L P +
Sbjct: 224 LIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRN 283
Query: 335 --RRKPWP-------------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379
+ K WP + DF+ +L DPR R A ++HPW+++
Sbjct: 284 ISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGM 343
Query: 380 SEI 382
EI
Sbjct: 344 EEI 346
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 63.2 bits (152), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 81/151 (53%), Gaps = 12/151 (7%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
A L +E++ + ++ F D D +G I+ E+ + + L E+ + +++ ID +
Sbjct: 1 ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVM-RSLGQNPTEAELRDMMSEIDRDG 59
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 526
+G VDF EF+ + ++++ D+E+ + AF FD D +GF++ ELR G
Sbjct: 60 NGTVDFPEFLG--MMARKMKDTDNEE---EIREAFRVFDKDGNGFVSAAELRHVMTRLGE 114
Query: 527 KGS---IDPLLEEADIDKDGRISLSEFRRLL 554
K S +D ++ AD D DG+++ EF R+L
Sbjct: 115 KLSDEEVDEMIRAADTDGDGQVNYEEFVRVL 145
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 121/307 (39%), Gaps = 66/307 (21%)
Query: 38 NHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRR 97
+H A H QH + + KQH +S + T +P D R
Sbjct: 3 SHEAAAAQQHNSGTQHTVSGSQQEGQQRKQH---HSSKPTASMPRPHS-----DWQIPDR 54
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y I L+G G +G+ A DK VA+KKI + L I + + RE+ IL L H+
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDL-IDCKRILREIAILNRL-NHD 112
Query: 158 NVVKFYNA-----FEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
+VVK + E + +Y+ +E+ D K+ T + T
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIA------DSDFKKLFRTPVY------------LT 154
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKP 269
E ++ +L H G++HRD+KP N L +D S+K DFGL+ D+ +
Sbjct: 155 ELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCL---VNQDCSVKVCDFGLARTVDYPEN 211
Query: 270 G-------------------------KKFQDIVGSAYYVAPE--VLKRKSGPESDVWSIG 302
G ++ V + +Y APE +L+ DVWSIG
Sbjct: 212 GNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIG 271
Query: 303 VITYILL 309
I LL
Sbjct: 272 CIFAELL 278
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 339 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+P+ S A +K++LV +P R+T + L+HP+ +E
Sbjct: 366 FPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKE 402
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 62.8 bits (151), Expect = 6e-10, Method: Composition-based stats.
Identities = 48/148 (32%), Positives = 73/148 (49%), Gaps = 21/148 (14%)
Query: 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 473
D +E+ L +F +D+D +GS+S+EE LP + V ++ D + +G V
Sbjct: 1 DADEIKRLGKRFKKLDLDNSGSLSVEEFMS-----LPELQQNPLVQRVIDIFDTDGNGEV 55
Query: 474 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE----LRMHTG---- 525
DF EF+ V Q ++ LR AF +D+D+DG+I+ E L+M G
Sbjct: 56 DFKEFIEG---VSQFSVKGDKEQKLR--FAFRIYDMDKDGYISNGELFQVLKMMVGNNLK 110
Query: 526 ---LKGSIDPLLEEADIDKDGRISLSEF 550
L+ +D + AD D DGRIS EF
Sbjct: 111 DTQLQQIVDKTIINADKDGDGRISFEEF 138
Score = 32.3 bits (72), Expect = 0.65, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI----DCNTDGLVDFS 476
LR F D+DK+G IS E+ Q L + LK++++ +I+ D + DG + F
Sbjct: 77 LRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFE 136
Query: 477 EFVAAT--LHVHQ 487
EF A L +H+
Sbjct: 137 EFCAVVGGLDIHK 149
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 111/271 (40%), Gaps = 46/271 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 26 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 78
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV-VVR 221
Y ++ +YI E G LLD + +M +Y V +
Sbjct: 79 YAVVSEEP-IYIVTEYMSKGSLLDFLKGEM----------------GKYLRLPQLVDMAA 121
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQ 274
Q+ A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF- 177
Query: 275 DIVGSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R
Sbjct: 178 ----PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-- 231
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLT 363
+R P S D + + KDP R T
Sbjct: 232 -YRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 111/271 (40%), Gaps = 46/271 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 26 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 78
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV-VVR 221
Y ++ +YI E G LLD + +M +Y V +
Sbjct: 79 YAVVSEEP-IYIVCEYMSKGSLLDFLKGEM----------------GKYLRLPQLVDMAA 121
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQ 274
Q+ A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF- 177
Query: 275 DIVGSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R
Sbjct: 178 ----PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-- 231
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLT 363
+R P S D + + KDP R T
Sbjct: 232 -YRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 81/147 (55%), Gaps = 12/147 (8%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + + + +D +
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELG-TVXRSLGQNPTEAELQDXINEVDADG 60
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 526
+G +DF EF+ T + ++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 61 NGTIDFPEFL--TXXARKXKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVXTNLGE 115
Query: 527 ---KGSIDPLLEEADIDKDGRISLSEF 550
+D + EADID DG+++ EF
Sbjct: 116 KLTDEEVDQXIREADIDGDGQVNYEEF 142
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 81/147 (55%), Gaps = 12/147 (8%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + + + +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELG-TVXRSLGQNPTEAELQDXINEVDADG 59
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 526
+G +DF EF+ T + ++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 60 NGTIDFPEFL--TXXARKXKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVXTNLGE 114
Query: 527 ---KGSIDPLLEEADIDKDGRISLSEF 550
+D + EADID DG+++ EF
Sbjct: 115 KLTDEEVDEXIREADIDGDGQVNYEEF 141
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 110/271 (40%), Gaps = 46/271 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 193 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGNM----SPEAFLQEAQVMKKLR-HEKLVQL 245
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV-VVR 221
Y ++ +YI E G LLD + +M +Y V +
Sbjct: 246 YAVVSEEP-IYIVTEYMSKGSLLDFLKGEM----------------GKYLRLPQLVDMAA 288
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQ 274
Q+ A VHRD++ N L E+ K DFGL I + G KF
Sbjct: 289 QIASGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLGRLIEDNEYTARQGAKF- 344
Query: 275 DIVGSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R
Sbjct: 345 ----PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-- 398
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLT 363
+R P S D + + KDP R T
Sbjct: 399 -YRMPCPPECPESLHDLMCQCWRKDPEERPT 428
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 49/225 (21%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKI-----EKNKMILPIAVEDVKREVKILQALAG 155
G++LG G FG T + G+ + +K++ E + L +EVK+++ L
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFL--------KEVKVMRCLE- 65
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
H NV+KF D + E +GG L I+ M DS+Y
Sbjct: 66 HPNVLKFIGVLYKDKRLNFITEYIKGGTLRG-IIKSM---------------DSQYPWSQ 109
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------- 267
+ + A H ++HRD+ N L +E+ ++ DFGL+ +
Sbjct: 110 RVSFAKDIASGMAYLHSMNIIHRDLNSHNCL---VRENKNVVVADFGLARLMVDEKTQPE 166
Query: 268 ------KPG-KKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVI 304
KP KK +VG+ Y++APE++ +S E DV+S G++
Sbjct: 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIV 211
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 62.0 bits (149), Expect = 8e-10, Method: Composition-based stats.
Identities = 48/152 (31%), Positives = 81/152 (53%), Gaps = 13/152 (8%)
Query: 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 468
++ L +E++A+ ++ F D D +GSIS E+ + + L E+ V +++ ID +
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVM-RSLGLSPSEAEVADLMNEIDVD 59
Query: 469 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTG 525
+ ++FSEF+A L QL+ +DSE+ L AF+ FD + DG I+ EL+ G
Sbjct: 60 GNHAIEFSEFLA--LMSRQLKCNDSEQELLE---AFKVFDKNGDGLISAAELKHVLTSIG 114
Query: 526 LK---GSIDPLLEEADIDKDGRISLSEFRRLL 554
K +D +L E D G I++ +F LL
Sbjct: 115 EKLTDAEVDEMLREVS-DGSGEINIKQFAALL 145
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 111/271 (40%), Gaps = 46/271 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 17 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 69
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV-VVR 221
Y ++ +YI E G LLD + +M +Y V +
Sbjct: 70 YAVVSEEP-IYIVTEYMSKGSLLDFLKGEM----------------GKYLRLPQLVDMAA 112
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQ 274
Q+ A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 113 QIASGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF- 168
Query: 275 DIVGSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R
Sbjct: 169 ----PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-- 222
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLT 363
+R P S D + + KDP R T
Sbjct: 223 -YRMPCPPECPESLHDLMCQCWRKDPEERPT 252
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 111/271 (40%), Gaps = 46/271 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 15 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 67
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV-VVR 221
Y ++ +YI E G LLD + +M +Y V +
Sbjct: 68 YAVVSEEP-IYIVTEYMSKGSLLDFLKGEM----------------GKYLRLPQLVDMAA 110
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQ 274
Q+ A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 111 QIASGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF- 166
Query: 275 DIVGSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R
Sbjct: 167 ----PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-- 220
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLT 363
+R P S D + + KDP R T
Sbjct: 221 -YRMPCPPECPESLHDLMCQCWRKDPEERPT 250
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 29/251 (11%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEKD 83
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTS 199
D+ E+++++ + H+N++ A D +Y+ + G L + + A+ +
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARR-PPGMEY 142
Query: 200 AWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259
++ + + + T KD Q+ R +HRD+ N L E++ +K
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIA 199
Query: 260 DFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRP 314
DFGL+ + I KK + ++APE L R +SDVWS GV+ + I G P
Sbjct: 200 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 315 FWDKTEDGIFK 325
+ + +FK
Sbjct: 260 YPGIPVEELFK 270
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 116/286 (40%), Gaps = 47/286 (16%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
R +G+ +G GQFG + + N K KN D RE + +AL
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN------CTSDSVREKFLQEALT 64
Query: 155 ----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
H ++VK +N V+I MELC GEL FL +RK
Sbjct: 65 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS---------------FLQVRK--- 105
Query: 211 YTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
++ A++++ A +L VHRD+ N L S + +K DFGLS +++
Sbjct: 106 FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYME 162
Query: 269 PGKKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIF 324
+ G ++APE + R+ SDVW GV + IL+ G +PF + +
Sbjct: 163 DSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
Query: 325 KEVLRNKPDFRRKPW-PSISNSAKDFVKKLLVKDP--RARLTAAQA 367
+ + R P P+ + + K DP R R T +A
Sbjct: 223 GRIENGE----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 111/271 (40%), Gaps = 46/271 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ + HE +V+
Sbjct: 26 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKIR-HEKLVQL 78
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV-VVR 221
Y ++ +YI E G LLD + +M +Y V +
Sbjct: 79 YAVVSEEP-IYIVTEYMSKGSLLDFLKGEM----------------GKYLRLPQLVDMAA 121
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQ 274
Q+ A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF- 177
Query: 275 DIVGSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R
Sbjct: 178 ----PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-- 231
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLT 363
+R P S D + + KDP R T
Sbjct: 232 -YRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 31/228 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G+ +G G FG Y+ TD A G+ VA+K +E K P + E KI + + G
Sbjct: 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK-LECVKTKHP----QLHIESKIYKMMQGG 62
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ + +Y + MEL + +L + RK ++ K
Sbjct: 63 VGIPTIRWCGAEGDYNVMVMEL--------------LGPSLEDLFNFCSRK---FSLKTV 105
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-------- 268
++ QM+ H +HRD+KP+NFL K+ + + DFGL+ +
Sbjct: 106 LLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI 165
Query: 269 PGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF 315
P ++ +++ G+A Y + L + D+ S+G + G P+
Sbjct: 166 PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 213
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 29/251 (11%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEKD 83
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTS 199
D+ E+++++ + H+N++ A D +Y+ + G L + + A+ +
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARR-PPGMEY 142
Query: 200 AWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259
++ + + + T KD Q+ R +HRD+ N L E++ +K
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIA 199
Query: 260 DFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRP 314
DFGL+ + I KK + ++APE L R +SDVWS GV+ + I G P
Sbjct: 200 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 315 FWDKTEDGIFK 325
+ + +FK
Sbjct: 260 YPGIPVEELFK 270
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 111/271 (40%), Gaps = 46/271 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 26 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 78
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV-VVR 221
Y ++ +YI E G LLD + +M +Y V +
Sbjct: 79 YAVVSEEP-IYIVTEYMSKGCLLDFLKGEM----------------GKYLRLPQLVDMAA 121
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQ 274
Q+ A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF- 177
Query: 275 DIVGSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R
Sbjct: 178 ----PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-- 231
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLT 363
+R P S D + + KDP R T
Sbjct: 232 -YRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 116/286 (40%), Gaps = 47/286 (16%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
R +G+ +G GQFG + + N K KN D RE + +AL
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN------CTSDSVREKFLQEALT 444
Query: 155 ----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
H ++VK +N V+I MELC GEL FL +RK
Sbjct: 445 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS---------------FLQVRK--- 485
Query: 211 YTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
++ A++++ A +L VHRD+ N L + +K DFGLS +++
Sbjct: 486 FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSAT---DCVKLGDFGLSRYME 542
Query: 269 PGKKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIF 324
++ G ++APE + R+ SDVW GV + IL+ G +PF + +
Sbjct: 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 602
Query: 325 KEVLRNKPDFRRKPW-PSISNSAKDFVKKLLVKDP--RARLTAAQA 367
+ + R P P+ + + K DP R R T +A
Sbjct: 603 GRIENGE----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 644
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 110/271 (40%), Gaps = 46/271 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 26 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 78
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV-VVR 221
Y ++ +YI E G LLD + +M +Y V +
Sbjct: 79 YAVVSEEP-IYIVTEYMSKGSLLDFLKGEM----------------GKYLRLPQLVDMAA 121
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQ 274
Q+ A VHRD+ N L E+ K DFGL+ I + G KF
Sbjct: 122 QIASGMAYVERMNYVHRDLAAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF- 177
Query: 275 DIVGSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R
Sbjct: 178 ----PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-- 231
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLT 363
+R P S D + + KDP R T
Sbjct: 232 -YRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 31/222 (13%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T+ K LG GQFG + K D VAVK I++ M + ++ +E + + L+ H
Sbjct: 11 TLLKELGSGQFGVVKLGKWKGQYD-VAVKMIKEGSM----SEDEFFQEAQTMMKLS-HPK 64
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+VKFY + +YI E G LL+ + + L + L + D
Sbjct: 65 LVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSH--GKGLEPSQLLEMCYD---------- 112
Query: 219 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 278
V M + + H +HRD+ N L D +K +DFG++ ++ ++ VG
Sbjct: 113 VCEGMAFLES----HQFIHRDLAARNCL---VDRDLCVKVSDFGMTRYVL-DDQYVSSVG 164
Query: 279 SAYYV---APEVLKR-KSGPESDVWSIGVITY-ILLCGRRPF 315
+ + V APEV K +SDVW+ G++ + + G+ P+
Sbjct: 165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPY 206
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 31/228 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G+ +G G FG Y+ TD A G+ VA+K +E K P + E KI + + G
Sbjct: 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK-LECVKTKHP----QLHIESKIYKMMQGG 64
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ + +Y + MEL + +L + RK ++ K
Sbjct: 65 VGIPTIRWCGAEGDYNVMVMEL--------------LGPSLEDLFNFCSRK---FSLKTV 107
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-------- 268
++ QM+ H +HRD+KP+NFL K+ + + DFGL+ +
Sbjct: 108 LLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI 167
Query: 269 PGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF 315
P ++ +++ G+A Y + L + D+ S+G + G P+
Sbjct: 168 PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 215
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 116/286 (40%), Gaps = 47/286 (16%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
R +G+ +G GQFG + + N K KN D RE + +AL
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN------CTSDSVREKFLQEALT 64
Query: 155 ----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
H ++VK +N V+I MELC GEL FL +RK
Sbjct: 65 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS---------------FLQVRK--- 105
Query: 211 YTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
++ A++++ A +L VHRD+ N L + +K DFGLS +++
Sbjct: 106 FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSAT---DCVKLGDFGLSRYME 162
Query: 269 PGKKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIF 324
++ G ++APE + R+ SDVW GV + IL+ G +PF + +
Sbjct: 163 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
Query: 325 KEVLRNKPDFRRKPW-PSISNSAKDFVKKLLVKDP--RARLTAAQA 367
+ + R P P+ + + K DP R R T +A
Sbjct: 223 GRIENGE----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 116/282 (41%), Gaps = 40/282 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR---EVKILQALAGHENVV 160
LG G +G +G +AVK+I + ++ KR ++ I V
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRAT-----VNSQEQKRLLMDLDISMRTVDCPFTV 113
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVV 220
FY A + V+I MEL + LD+ ++I T I +D K A +V
Sbjct: 114 TFYGALFREGDVWICMELMDTS--LDKFYKQVIDKGQT------IPED--ILGKIAVSIV 163
Query: 221 RQMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ + HLH ++HRD+KP N L + + +K DFG+S ++
Sbjct: 164 KALE------HLHSKLSVIHRDVKPSNVLINALGQ---VKMCDFGISGYLVDSVAKTIDA 214
Query: 278 GSAYYVAPEVL-----KRKSGPESDVWSIGVITYILLCGRRPF--WDKTEDGIFKEVLRN 330
G Y+APE + ++ +SD+WS+G+ L R P+ W + + V
Sbjct: 215 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP 274
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
P P S DF + L K+ + R T + + HP+
Sbjct: 275 SPQL---PADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 313
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 79/147 (53%), Gaps = 12/147 (8%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + + + +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKEL-GTVXRSLGCNPTEAELQDXINEVDADG 59
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 526
+G ++F EF+ T ++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 60 NGTINFPEFL--TXXARCXKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVXTNLGE 114
Query: 527 ---KGSIDPLLEEADIDKDGRISLSEF 550
+D + EADID DG+++ EF
Sbjct: 115 KLTDEEVDEXIREADIDGDGQVNYEEF 141
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 98/240 (40%), Gaps = 37/240 (15%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG- 155
I +++G G+FG K G R VA+K ++ E +R+ ++ G
Sbjct: 47 IERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGY------TEKQRRDFLCEASIMGQ 100
Query: 156 --HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H NVV V I +E E G L D L K D ++T
Sbjct: 101 FDHPNVVHLEGVVTRGKPVMIVIEFMENGAL-DAFLRK---------------HDGQFTV 144
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGK 271
++R + G VHRD+ N L S + K +DFGLS I+ P
Sbjct: 145 IQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNS---NLVCKVSDFGLSRVIEDDPEA 201
Query: 272 KFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 327
+ G + APE ++ RK SDVWS G++ + ++ G RP+WD + + K +
Sbjct: 202 VYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 261
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 101/224 (45%), Gaps = 29/224 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+++ +++G G FG Y G A+K ++K ++ + E + +I+ +L
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTG 248
Query: 158 N---VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
+ +V AF + + ++L GG+L + + ++E
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFILDLMNGGDL-----------------HYHLSQHGVFSEA 291
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKF 273
D +++ H +V+RD+KP N L E ++ +D GL+ DF K KK
Sbjct: 292 DMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK--KKP 346
Query: 274 QDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF 315
VG+ Y+APEVL++ +S D +S+G + + LL G PF
Sbjct: 347 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 82/153 (53%), Gaps = 12/153 (7%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E+ ++R+ FD D D +G+I +E++ A+ + L ++ K+ + +++ ID + G
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAM-RALGFEPKKEEIKKMISEIDKDGSGT 80
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG---- 528
+DF EF+ T+ ++ E DS + L+ AF FD D G IT ++LR G
Sbjct: 81 IDFEEFL--TMMTAKMGERDSREEILK---AFRLFDDDNSGTITIKDLRRVAKELGENLT 135
Query: 529 --SIDPLLEEADIDKDGRISLSEFRRLLRTASI 559
+ ++ EAD + D I EF R+++ S+
Sbjct: 136 EEELQEMIAEADRNDDNEIDEDEFIRIMKKTSL 168
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 101/224 (45%), Gaps = 29/224 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+++ +++G G FG Y G A+K ++K ++ + E + +I+ +L
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTG 249
Query: 158 N---VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
+ +V AF + + ++L GG+L + + ++E
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDL-----------------HYHLSQHGVFSEA 292
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKF 273
D +++ H +V+RD+KP N L E ++ +D GL+ DF K KK
Sbjct: 293 DMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK--KKP 347
Query: 274 QDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF 315
VG+ Y+APEVL++ +S D +S+G + + LL G PF
Sbjct: 348 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 121/288 (42%), Gaps = 47/288 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G+FG + + +G A+K+ K + + ++ REV L H +VV+++
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYF 75
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+A+ +D+++ I E C GG L D I R S + E + ++ Q+
Sbjct: 76 SAWAEDDHMLIQNEYCNGGSLADAISENY-------------RIMSYFKEAELKDLLLQV 122
Query: 224 LRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATD----------FGLSDFIKPGKK 272
R H LVH D+KP N F+ +++ +++ + D F + D +
Sbjct: 123 GRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRI 182
Query: 273 FQDIV--GSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF------WDKTEDG 322
V G + ++A EVL+ P++D++++ +T + G P W + G
Sbjct: 183 SSPQVEEGDSRFLANEVLQENYTHLPKADIFALA-LTVVCAAGAEPLPRNGDQWHEIRQG 241
Query: 323 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370
+ + +S + +K ++ DP R +A + H
Sbjct: 242 RLPRIPQ-----------VLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 121/288 (42%), Gaps = 47/288 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G+FG + + +G A+K+ K + + ++ REV L H +VV+++
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYF 75
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+A+ +D+++ I E C GG L D I R S + E + ++ Q+
Sbjct: 76 SAWAEDDHMLIQNEYCNGGSLADAISENY-------------RIMSYFKEAELKDLLLQV 122
Query: 224 LRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATD----------FGLSDFIKPGKK 272
R H LVH D+KP N F+ +++ +++ + D F + D +
Sbjct: 123 GRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRI 182
Query: 273 FQDIV--GSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF------WDKTEDG 322
V G + ++A EVL+ P++D++++ +T + G P W + G
Sbjct: 183 SSPQVEEGDSRFLANEVLQENYTHLPKADIFALA-LTVVCAAGAEPLPRNGDQWHEIRQG 241
Query: 323 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370
+ + +S + +K ++ DP R +A + H
Sbjct: 242 RLPRIPQ-----------VLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 84/163 (51%), Gaps = 14/163 (8%)
Query: 403 QFALRALAS---TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL 459
++ LR L+ +L EE+ +LR+ F D DK+G I+ ++ + + + + E ++
Sbjct: 6 KYPLRNLSRKDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCM-RTMGYMPTEMELI 64
Query: 460 EILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS-QAAFEKFDIDRDGFITPE 518
E+ Q I+ N G VDF +FV L +L ++ ++ + AF +FD + DG I+
Sbjct: 65 ELSQQINMNLGGHVDFDDFV--ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTS 122
Query: 519 ELRM-------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 554
ELR H I+ ++ + D++ DGR+ EF R++
Sbjct: 123 ELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 165
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 125/285 (43%), Gaps = 53/285 (18%)
Query: 104 LGHGQFGYTYVA-----TDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
LG G FG ++A + + VAVK ++ + A +D +RE ++L L HE+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLA---ARKDFQREAELLTNLQ-HEH 78
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+VKFY D + + + E + G+L K + A L D + + +
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDL-----NKFLRAHGPDAMILV---DGQPRQAKGEL 130
Query: 219 VVRQMLRVAAE-----CHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
+ QML +A++ +L VHRD+ N L + + +K DFG+S
Sbjct: 131 GLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA---NLLVKIGDFGMS------- 180
Query: 272 KFQDIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFWD 317
+D+ + YY + PE ++ RK ESDVWS GVI + I G++P++
Sbjct: 181 --RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQ 238
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 362
+ + + + + + R + P D + ++P+ RL
Sbjct: 239 LSNTEVIECITQGRVLERPRVCP---KEVYDVMLGCWQREPQQRL 280
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 59.7 bits (143), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 9/150 (6%)
Query: 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 470
S L +E +A+ + FD D D G IS++E+ + + L + + I++ +D +
Sbjct: 9 SYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVM-RMLGQTPTKEELDAIIEEVDEDGS 67
Query: 471 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-- 528
G +DF EF+ + V Q++E K F FD + DG+I EEL G
Sbjct: 68 GTIDFEEFL--VMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEH 125
Query: 529 ----SIDPLLEEADIDKDGRISLSEFRRLL 554
I+ L+++ D + DGRI EF +++
Sbjct: 126 VTDEEIESLMKDGDKNNDGRIDFDEFLKMM 155
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 101/224 (45%), Gaps = 29/224 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+++ +++G G FG Y G A+K ++K ++ + E + +I+ +L
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTG 249
Query: 158 N---VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
+ +V AF + + ++L GG+L + + ++E
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDL-----------------HYHLSQHGVFSEA 292
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKF 273
D +++ H +V+RD+KP N L E ++ +D GL+ DF K KK
Sbjct: 293 DMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK--KKP 347
Query: 274 QDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF 315
VG+ Y+APEVL++ +S D +S+G + + LL G PF
Sbjct: 348 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 101/224 (45%), Gaps = 29/224 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+++ +++G G FG Y G A+K ++K ++ + E + +I+ +L
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTG 249
Query: 158 N---VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
+ +V AF + + ++L GG+L + + ++E
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDL-----------------HYHLSQHGVFSEA 292
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKF 273
D +++ H +V+RD+KP N L E ++ +D GL+ DF K KK
Sbjct: 293 DMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK--KKP 347
Query: 274 QDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF 315
VG+ Y+APEVL++ +S D +S+G + + LL G PF
Sbjct: 348 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 35/225 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T+ LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 75
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ + YI +E G LLD + ++ E +A V
Sbjct: 76 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL------------------RECNRQEVNAVV 117
Query: 219 VVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
++ ++++ +HRD+ N L E+ +K DFGLS + G +
Sbjct: 118 LLYMATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTA 173
Query: 276 IVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
G+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 121/288 (42%), Gaps = 47/288 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G+FG + + +G A+K+ K + + ++ REV L H +VV+++
Sbjct: 19 IGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYF 77
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+A+ +D+++ I E C GG L D I R S + E + ++ Q+
Sbjct: 78 SAWAEDDHMLIQNEYCNGGSLADAISENY-------------RIMSYFKEAELKDLLLQV 124
Query: 224 LRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATD----------FGLSDFIKPGKK 272
R H LVH D+KP N F+ +++ +++ + D F + D +
Sbjct: 125 GRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRI 184
Query: 273 FQDIV--GSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF------WDKTEDG 322
V G + ++A EVL+ P++D++++ +T + G P W + G
Sbjct: 185 SSPQVEEGDSRFLANEVLQENYTHLPKADIFALA-LTVVCAAGAEPLPRNGDQWHEIRQG 243
Query: 323 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370
+ + +S + +K ++ DP R +A + H
Sbjct: 244 RLPRIPQ-----------VLSQEFTELLKVMIHPDPERRPSAMALVKH 280
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 59.7 bits (143), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E +A+ + FD D D G IS +E+ + + L + + I++ +D + G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEEL---RMHTG---L 526
+DF EF+ + V Q++E K F FD + DGFI EEL TG +
Sbjct: 73 IDFEEFL--VMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVI 130
Query: 527 KGSIDPLLEEADIDKDGRISLSEFRRLL 554
+ I+ L++++D + DGRI EF +++
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 59.7 bits (143), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 65/112 (58%), Gaps = 6/112 (5%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
+S L +E++A+ ++ F D D NGSIS E+ + + L E+ V +++ ID +
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVM-RSLGLSPSEAEVNDLMNEIDVDG 59
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR 521
+ ++FSEF+A L QL+ +DSE+ L AF+ FD + DG I+ EL+
Sbjct: 60 NHQIEFSEFLA--LMSRQLKSNDSEQELLE---AFKVFDKNGDGLISAAELK 106
Score = 30.0 bits (66), Expect = 3.5, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 501 QAAFEKFDIDRDGFITPEELRM---HTGLKGS---IDPLLEEADIDKDGRISLSEFRRLL 554
+ AF FD D +G I+ EL GL S ++ L+ E D+D + +I SEF L+
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 41/246 (16%)
Query: 84 KRTDFGYDKDFDRR------YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP 137
K T +G ++D+ T+ LG GQ+G Y K VAVK ++++ M
Sbjct: 241 KPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--- 297
Query: 138 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTL 197
VE+ +E +++ + H N+V+ + YI E G LLD +
Sbjct: 298 -EVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--------- 346
Query: 198 TSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDS 254
++ E +A V++ ++++ +HR++ N L E+
Sbjct: 347 ---------RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCL---VGENH 394
Query: 255 SLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILL 309
+K DFGLS + G + G+ + + APE L K +SDVW+ GV+ + I
Sbjct: 395 LVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
Query: 310 CGRRPF 315
G P+
Sbjct: 454 YGMSPY 459
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 121/288 (42%), Gaps = 47/288 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G+FG + + +G A+K+ K + + ++ REV L H +VV+++
Sbjct: 15 IGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYF 73
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+A+ +D+++ I E C GG L D I R S + E + ++ Q+
Sbjct: 74 SAWAEDDHMLIQNEYCNGGSLADAISENY-------------RIMSYFKEAELKDLLLQV 120
Query: 224 LRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATD----------FGLSDFIKPGKK 272
R H LVH D+KP N F+ +++ +++ + D F + D +
Sbjct: 121 GRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRI 180
Query: 273 FQDIV--GSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF------WDKTEDG 322
V G + ++A EVL+ P++D++++ +T + G P W + G
Sbjct: 181 SSPQVEEGDSRFLANEVLQENYTHLPKADIFALA-LTVVXAAGAEPLPRNGDQWHEIRQG 239
Query: 323 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370
+ + +S + +K ++ DP R +A + H
Sbjct: 240 RLPRIPQ-----------VLSQEFTELLKVMIHPDPERRPSAMALVKH 276
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 116/282 (41%), Gaps = 40/282 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR---EVKILQALAGHENVV 160
LG G +G +G +AVK+I + ++ KR ++ I V
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRAT-----VNSQEQKRLLMDLDISMRTVDCPFTV 69
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVV 220
FY A + V+I MEL + LD+ ++I T I +D K A +V
Sbjct: 70 TFYGALFREGDVWICMELMDTS--LDKFYKQVIDKGQT------IPED--ILGKIAVSIV 119
Query: 221 RQMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ + HLH ++HRD+KP N L + + +K DFG+S ++
Sbjct: 120 KALE------HLHSKLSVIHRDVKPSNVLINALGQ---VKMCDFGISGYLVDDVAKDIDA 170
Query: 278 GSAYYVAPEVL-----KRKSGPESDVWSIGVITYILLCGRRPF--WDKTEDGIFKEVLRN 330
G Y+APE + ++ +SD+WS+G+ L R P+ W + + V
Sbjct: 171 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP 230
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
P P S DF + L K+ + R T + + HP+
Sbjct: 231 SPQL---PADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 269
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 41/246 (16%)
Query: 84 KRTDFGYDKDFDRR------YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP 137
K T +G ++D+ T+ LG GQ+G Y K VAVK ++++ M
Sbjct: 199 KPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--- 255
Query: 138 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTL 197
VE+ +E +++ + H N+V+ + YI E G LLD +
Sbjct: 256 -EVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--------- 304
Query: 198 TSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDS 254
++ E +A V++ ++++ +HR++ N L E+
Sbjct: 305 ---------RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCL---VGENH 352
Query: 255 SLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILL 309
+K DFGLS + G + G+ + + APE L K +SDVW+ GV+ + I
Sbjct: 353 LVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
Query: 310 CGRRPF 315
G P+
Sbjct: 412 YGMSPY 417
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 93/220 (42%), Gaps = 35/220 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 73
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ YI E G LLD + ++ E A V++
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYL------------------RECNRQEVSAVVLLYMA 115
Query: 224 LRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 280
++++ +HRD+ N L E+ +K DFGLS + G F G+
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTFTAHAGAK 171
Query: 281 Y---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
+ + APE L K +SDVW+ GV+ + I G P+
Sbjct: 172 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 101/253 (39%), Gaps = 42/253 (16%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG- 155
I +++G G+FG K G R VA+K ++ E +R+ ++ G
Sbjct: 37 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY------TEKQRRDFLSEASIMGQ 90
Query: 156 --HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H NV+ V I E E G L D L + D ++T
Sbjct: 91 FDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQ---------------NDGQFTV 134
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK---PG 270
++R + VHRD+ N L S + K +DFGLS F++
Sbjct: 135 IQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNS---NLVCKVSDFGLSRFLEDDTSD 191
Query: 271 KKFQDIVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFK 325
+ +G + APE ++ RK SDVWS G++ + ++ G RP+WD T +
Sbjct: 192 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN 251
Query: 326 EVLRNKPDFRRKP 338
+ + D+R P
Sbjct: 252 AI---EQDYRLPP 261
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 94/220 (42%), Gaps = 35/220 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G YV K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 94
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ YI E G LLD + ++ E A V++
Sbjct: 95 GVCTLEPPFYIVTEYMPYGNLLDYL------------------RECNREEVTAVVLLYMA 136
Query: 224 LRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 280
++++ +HRD+ N L E+ +K DFGLS + G + G+
Sbjct: 137 TQISSAMEYLEKKNFIHRDLAARNCL---VGENHVVKVADFGLSRLMT-GDTYTAHAGAK 192
Query: 281 Y---YVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPF 315
+ + APE L + +SDVW+ GV+ + I G P+
Sbjct: 193 FPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPY 232
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 59.3 bits (142), Expect = 5e-09, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 9/148 (6%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E +A+ + FD D D G IS +E+ + + L + + I++ +D + G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS--- 529
+DF EF+ + V Q++E K + F FD + DGFI EEL G
Sbjct: 73 IDFEEFL--VMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 530 ---IDPLLEEADIDKDGRISLSEFRRLL 554
I+ L++++D + DGRI EF +++
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 103/246 (41%), Gaps = 41/246 (16%)
Query: 84 KRTDFGYDKDFDRR------YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP 137
K T +G ++D+ T+ LG GQ+G Y K VAVK ++++ M
Sbjct: 202 KPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--- 258
Query: 138 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTL 197
VE+ +E +++ + H N+V+ + YI E G LLD +
Sbjct: 259 -EVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--------- 307
Query: 198 TSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDS 254
++ E A V++ ++++ +HR++ N L E+
Sbjct: 308 ---------RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCL---VGENH 355
Query: 255 SLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILL 309
+K DFGLS + G + G+ + + APE L K +SDVW+ GV+ + I
Sbjct: 356 LVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
Query: 310 CGRRPF 315
G P+
Sbjct: 415 YGMSPY 420
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 35/225 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T+ LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 72
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ + YI E G LLD + ++ E +A V
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYL------------------RECNRQEVNAVV 114
Query: 219 VVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
++ ++++ +HRD+ N L E+ +K DFGLS + G +
Sbjct: 115 LLYMATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTA 170
Query: 276 IVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
G+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 171 PAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 35/225 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T+ LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N
Sbjct: 17 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 71
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ + YI E G LLD + ++ E +A V
Sbjct: 72 LVQLLGVCTREPPFYIITEFMTYGNLLDYL------------------RECNRQEVNAVV 113
Query: 219 VVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
++ ++++ +HRD+ N L E+ +K DFGLS + G +
Sbjct: 114 LLYMATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTA 169
Query: 276 IVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
G+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 170 PAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 35/225 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T+ LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 75
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ + YI E G LLD + ++ E +A V
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYL------------------RECNRQEVNAVV 117
Query: 219 VVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
++ ++++ +HRD+ N L E+ +K DFGLS + G +
Sbjct: 118 LLYMATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTA 173
Query: 276 IVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
G+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 107/270 (39%), Gaps = 44/270 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 275 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 327
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
Y ++ +YI E G LLD FL + Q
Sbjct: 328 YAVVSEEP-IYIVTEYMSKGSLLD---------------FLKGETGKYLRLPQLVDMAAQ 371
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQD 275
+ A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 372 IASGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF-- 426
Query: 276 IVGSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
+ APE L + +SDVWS G+ +T + GR P+ + +V R
Sbjct: 427 ---PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG--- 480
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLT 363
+R P S D + + K+P R T
Sbjct: 481 YRMPCPPECPESLHDLMCQCWRKEPEERPT 510
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 109/265 (41%), Gaps = 62/265 (23%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
+G+ +G G FG + +A+ VAVK + + P +E +IL+ + H N
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET--LPPDLKAKFLQEARILKQYS-HPN 173
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ +YI MEL +GG+ L + T L ++ + AA
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFL--------TFLRTEGARLRVKTLLQMVGDAAA- 224
Query: 219 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 278
M + ++C +HRD+ N L E + LK +DFG+S ++ D V
Sbjct: 225 ---GMEYLESKC----CIHRDLAARNCL---VTEKNVLKISDFGMS------REEADGVX 268
Query: 279 SAY---------YVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+A + APE L + ESDVWS G++ W+ G
Sbjct: 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGIL----------LWETFSLGA----- 313
Query: 329 RNKPDFRRKPWPSISN-SAKDFVKK 352
P+P++SN ++FV+K
Sbjct: 314 --------SPYPNLSNQQTREFVEK 330
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 107/270 (39%), Gaps = 44/270 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 192 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 244
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
Y ++ +YI E G LLD FL + Q
Sbjct: 245 YAVVSEEP-IYIVTEYMSKGSLLD---------------FLKGETGKYLRLPQLVDMAAQ 288
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQD 275
+ A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 289 IASGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF-- 343
Query: 276 IVGSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
+ APE L + +SDVWS G+ +T + GR P+ + +V R
Sbjct: 344 ---PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG--- 397
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLT 363
+R P S D + + K+P R T
Sbjct: 398 YRMPCPPECPESLHDLMCQCWRKEPEERPT 427
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 58.9 bits (141), Expect = 7e-09, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 11/151 (7%)
Query: 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 471
+L EE+ +LR+ F D DK+G I+ ++ + + + + E ++E+ Q I+ N G
Sbjct: 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCM-RTMGYMPTEMELIELSQQINMNLGG 62
Query: 472 LVDFSEFVAATLHVHQLEEHDSEKWHLRS-QAAFEKFDIDRDGFITPEELRM-------H 523
VDF +FV L +L ++ ++ + AF +FD + DG I+ ELR H
Sbjct: 63 HVDFDDFV--ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGH 120
Query: 524 TGLKGSIDPLLEEADIDKDGRISLSEFRRLL 554
I+ ++ + D++ DGR+ EF R++
Sbjct: 121 QVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 407 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 466
+ LA T D + +LRD F D + +G IS E+R+A+ L ++ + EI++ +D
Sbjct: 76 KLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVD 135
Query: 467 CNTDGLVDFSEFV 479
N DG VDF EFV
Sbjct: 136 LNGDGRVDFEEFV 148
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 107/262 (40%), Gaps = 56/262 (21%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
+G+ +G G FG + +A+ VAVK + + P +E +IL+ + H N
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET--LPPDLKAKFLQEARILKQYS-HPN 173
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ +YI MEL +GG+ L + T L ++ + AA
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFL--------TFLRTEGARLRVKTLLQMVGDAAA- 224
Query: 219 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD------FIKPGKK 272
M + ++C +HRD+ N L E + LK +DFG+S + G
Sbjct: 225 ---GMEYLESKC----CIHRDLAARNCL---VTEKNVLKISDFGMSREEADGVYAASGGL 274
Query: 273 FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331
Q V + APE L + ESDVWS G++ W+ G
Sbjct: 275 RQVPVK---WTAPEALNYGRYSSESDVWSFGIL----------LWETFSLGA-------- 313
Query: 332 PDFRRKPWPSISN-SAKDFVKK 352
P+P++SN ++FV+K
Sbjct: 314 -----SPYPNLSNQQTREFVEK 330
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 35/225 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T+ LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N
Sbjct: 20 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 74
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ + YI E G LLD + ++ E +A V
Sbjct: 75 LVQLLGVCTREPPFYIITEFMTYGNLLDYL------------------RECNRQEVNAVV 116
Query: 219 VVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
++ ++++ +HRD+ N L E+ +K DFGLS + G +
Sbjct: 117 LLYMATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTA 172
Query: 276 IVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
G+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 173 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 217
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 107/270 (39%), Gaps = 44/270 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 192 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 244
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
Y ++ +YI E G LLD FL + Q
Sbjct: 245 YAVVSEEP-IYIVTEYMSKGSLLD---------------FLKGETGKYLRLPQLVDMAAQ 288
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQD 275
+ A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 289 IASGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF-- 343
Query: 276 IVGSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
+ APE L + +SDVWS G+ +T + GR P+ + +V R
Sbjct: 344 ---PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG--- 397
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLT 363
+R P S D + + K+P R T
Sbjct: 398 YRMPCPPECPESLHDLMCQCWRKEPEERPT 427
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 35/225 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T+ LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 70
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ + YI +E G LLD + ++ E A V
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL------------------RECNRQEVSAVV 112
Query: 219 VVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
++ ++++ +HRD+ N L E+ +K DFGLS + G +
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTA 168
Query: 276 IVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
G+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 35/225 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T+ LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 70
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ + YI E G LLD + ++ E +A V
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYL------------------RECNRQEVNAVV 112
Query: 219 VVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
++ ++++ +HRD+ N L E+ +K DFGLS + G +
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTA 168
Query: 276 IVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
G+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 58.9 bits (141), Expect = 8e-09, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E +A+ + FD D D G IS +E+ + + L + + I++ +D + G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS--- 529
+DF EF+ + V Q++E K F FD + DGFI EEL G
Sbjct: 73 IDFEEFL--VMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 530 ---IDPLLEEADIDKDGRISLSEFRRLL 554
I+ L++++D + DGRI EF +++
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 35/225 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T+ LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 72
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ + YI E G LLD + ++ E +A V
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYL------------------RECNRQEVNAVV 114
Query: 219 VVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
++ ++++ +HRD+ N L E+ +K DFGLS + G +
Sbjct: 115 LLYMATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTA 170
Query: 276 IVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
G+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 171 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 58.9 bits (141), Expect = 8e-09, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 11/151 (7%)
Query: 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 471
+L EE+ +LR+ F D DK+G I+ ++ + + + + E ++E+ Q I+ N G
Sbjct: 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCM-RTMGYMPTEMELIELSQQINMNLGG 62
Query: 472 LVDFSEFVAATLHVHQLEEHDSEKWHLRS-QAAFEKFDIDRDGFITPEELRM-------H 523
VDF +FV L +L ++ ++ + AF +FD + DG I+ ELR H
Sbjct: 63 HVDFDDFV--ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGH 120
Query: 524 TGLKGSIDPLLEEADIDKDGRISLSEFRRLL 554
I+ ++ + D++ DGR+ EF R++
Sbjct: 121 QVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 407 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 466
+ LA T D + +LRD F D + +G IS E+R+A+ K L ++ + EI++ +D
Sbjct: 76 KLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVD 135
Query: 467 CNTDGLVDFSEFV 479
N DG VDF EFV
Sbjct: 136 LNGDGRVDFEEFV 148
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 103/239 (43%), Gaps = 37/239 (15%)
Query: 87 DFGYDK-DFDRR-YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK 144
D YDK + +R T+ LG GQ+G Y K VAVK ++++ M VE+
Sbjct: 4 DPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFL 59
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
+E +++ + H N+V+ + YI E G LLD +
Sbjct: 60 KEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---------------- 102
Query: 205 IRKDSRYTEKDAAVVVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDF 261
++ E +A V++ ++++ +HRD+ N L E+ +K DF
Sbjct: 103 --RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADF 157
Query: 262 GLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
GLS + G + G+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 158 GLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 58.5 bits (140), Expect = 9e-09, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E +A+ + FD D D G IS +E+ + + L + + I++ +D + G
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 69
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS--- 529
+DF EF+ + V Q++E K F FD + DGFI EEL G
Sbjct: 70 IDFEEFL--VMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVT 127
Query: 530 ---IDPLLEEADIDKDGRISLSEFRRLL 554
I+ L++++D + DGRI EF +++
Sbjct: 128 EEDIEDLMKDSDKNNDGRIDFDEFLKMM 155
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 94/220 (42%), Gaps = 35/220 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 75
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ YI +E G LLD + ++ E A V++
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYL------------------RECNRQEVSAVVLLYMA 117
Query: 224 LRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 280
++++ +HRD+ N L E+ +K DFGLS + G + G+
Sbjct: 118 TQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAGAK 173
Query: 281 Y---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
+ + APE L K +SDVW+ GV+ + I G P+
Sbjct: 174 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 35/225 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T+ LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N
Sbjct: 29 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 83
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ + YI E G LLD + ++ E +A V
Sbjct: 84 LVQLLGVCTREPPFYIITEFMTYGNLLDYL------------------RECNRQEVNAVV 125
Query: 219 VVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
++ ++++ +HRD+ N L E+ +K DFGLS + G +
Sbjct: 126 LLYMATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTA 181
Query: 276 IVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
G+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 182 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 226
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 35/225 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T+ LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 75
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ + YI E G LLD + ++ E +A V
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYL------------------RECNRQEVNAVV 117
Query: 219 VVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
++ ++++ +HRD+ N L E+ +K DFGLS + G +
Sbjct: 118 LLYMATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTA 173
Query: 276 IVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
G+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 35/225 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T+ LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 70
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ + YI E G LLD + ++ E +A V
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYL------------------RECNRQEVNAVV 112
Query: 219 VVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
++ ++++ +HRD+ N L E+ +K DFGLS + G +
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTA 168
Query: 276 IVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
G+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 97/241 (40%), Gaps = 37/241 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
TI +++G G+FG K G R VA+K ++ E +R+ ++ G
Sbjct: 25 TIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGY------TEKQRRDFLGEASIMG 78
Query: 156 ---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
H N++ V I E E G L D L K D ++T
Sbjct: 79 QFDHPNIIHLEGVVTKSKPVMIVTEYMENGSL-DTFLKK---------------NDGQFT 122
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PG 270
++R + G VHRD+ N L S + K +DFGLS ++ P
Sbjct: 123 VIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPE 179
Query: 271 KKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKE 326
+ G + APE + RK SDVWS G++ + ++ G RP+W+ T + K
Sbjct: 180 AAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKA 239
Query: 327 V 327
V
Sbjct: 240 V 240
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E +A+ + FD D D G IS +E+ + + L + + I++ +D + G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS--- 529
+DF EF+ + V Q++E K F FD + DGFI EEL G
Sbjct: 73 IDFEEFL--VMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 530 ---IDPLLEEADIDKDGRISLSEFRRLL 554
I+ L++++D + DGRI EF +++
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 96/229 (41%), Gaps = 24/229 (10%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQALAG 155
GK LG G FG AT G AV K+ KM+ A D K E+KI+ L
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAV-KMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
HEN+V A V + E C G+LL+ + K S L + AI +S + +D
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRK--SRVLETDPAFAI-ANSTLSTRD 165
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-------SDFIK 268
Q+ + A +HRD+ N L + K DFGL S++I
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH---VAKIGDFGLARDIMNDSNYIV 222
Query: 269 PGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 315
G + ++APE + +SDVWS G++ + I G P+
Sbjct: 223 KGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 107/270 (39%), Gaps = 44/270 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 19 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 71
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
Y ++ +YI E G LLD FL + Q
Sbjct: 72 YAVVSEEP-IYIVTEYMSKGSLLD---------------FLKGETGKYLRLPQLVDMAAQ 115
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQD 275
+ A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 116 IASGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF-- 170
Query: 276 IVGSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
+ APE L + +SDVWS G+ +T + GR P+ + +V R
Sbjct: 171 ---PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG--- 224
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLT 363
+R P S D + + K+P R T
Sbjct: 225 YRMPCPPECPESLHDLMCQCWRKEPEERPT 254
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 35/225 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T+ LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 75
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ + YI E G LLD + ++ E A V
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYL------------------RECNRQEVSAVV 117
Query: 219 VVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
++ ++++ +HRD+ N L E+ +K DFGLS + G +
Sbjct: 118 LLYMATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTA 173
Query: 276 IVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
G+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 107/270 (39%), Gaps = 44/270 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 192 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 244
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
Y ++ +YI E G LLD FL + Q
Sbjct: 245 YAVVSEEP-IYIVGEYMSKGSLLD---------------FLKGETGKYLRLPQLVDMAAQ 288
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQD 275
+ A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 289 IASGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF-- 343
Query: 276 IVGSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
+ APE L + +SDVWS G+ +T + GR P+ + +V R
Sbjct: 344 ---PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG--- 397
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLT 363
+R P S D + + K+P R T
Sbjct: 398 YRMPCPPECPESLHDLMCQCWRKEPEERPT 427
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 96/229 (41%), Gaps = 24/229 (10%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQALAG 155
GK LG G FG AT G AV K+ KM+ A D K E+KI+ L
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAV-KMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
HEN+V A V + E C G+LL+ + K S L + AI +S + +D
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRK--SRVLETDPAFAI-ANSTASTRD 165
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-------SDFIK 268
Q+ + A +HRD+ N L + K DFGL S++I
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH---VAKIGDFGLARDIMNDSNYIV 222
Query: 269 PGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 315
G + ++APE + +SDVWS G++ + I G P+
Sbjct: 223 KGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 107/270 (39%), Gaps = 44/270 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 23 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 75
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
Y ++ +YI E G LLD FL + Q
Sbjct: 76 YAVVSEEP-IYIVTEYMNKGSLLD---------------FLKGETGKYLRLPQLVDMSAQ 119
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQD 275
+ A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 120 IASGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF-- 174
Query: 276 IVGSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
+ APE L + +SDVWS G+ +T + GR P+ + +V R
Sbjct: 175 ---PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG--- 228
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLT 363
+R P S D + + K+P R T
Sbjct: 229 YRMPCPPECPESLHDLMCQCWRKEPEERPT 258
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 103/229 (44%), Gaps = 31/229 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G GQFG ++ N D+VA+K I + M + ED E +++ L+ H +V+ Y
Sbjct: 13 IGSGQFGLVHLGY-WLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPKLVQLY 66
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ + + E E G L D + + + L + D V M
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLD----------VCEGM 114
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY-- 281
+ C ++HRD+ N L E+ +K +DFG++ F+ ++ G+ +
Sbjct: 115 AYLEEAC----VIHRDLAARNCL---VGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPV 166
Query: 282 -YVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 327
+ +PEV + +SDVWS GV+ + + G+ P+ +++ + +++
Sbjct: 167 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 215
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 103/229 (44%), Gaps = 31/229 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G GQFG ++ N D+VA+K I + M + ED E +++ L+ H +V+ Y
Sbjct: 15 IGSGQFGLVHLGY-WLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPKLVQLY 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ + + E E G L D + + + L + D V M
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLD----------VCEGM 116
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY-- 281
+ C ++HRD+ N L E+ +K +DFG++ F+ ++ G+ +
Sbjct: 117 AYLEEAC----VIHRDLAARNCL---VGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPV 168
Query: 282 -YVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 327
+ +PEV + +SDVWS GV+ + + G+ P+ +++ + +++
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 107/270 (39%), Gaps = 44/270 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 23 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 75
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
Y ++ +YI E G LLD FL + Q
Sbjct: 76 YAVVSEEP-IYIVTEYMNKGSLLD---------------FLKGETGKYLRLPQLVDMSAQ 119
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQD 275
+ A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 120 IASGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEWTARQGAKF-- 174
Query: 276 IVGSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
+ APE L + +SDVWS G+ +T + GR P+ + +V R
Sbjct: 175 ---PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG--- 228
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLT 363
+R P S D + + K+P R T
Sbjct: 229 YRMPCPPECPESLHDLMCQCWRKEPEERPT 258
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)
Query: 97 RYTIGKLLGHGQFGYTYVATDK-ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+Y + + HG G+ Y+A D+ NG V +K + + A+ +R+ A
Sbjct: 81 QYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQ---FLAEVV 137
Query: 156 HENVVKFYNAFE-----DDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
H ++V+ +N E D YI ME GG+ L R K +
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYV-GGQSLKR------------------SKGQK 178
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
+A + ++L + H GLV+ D+KPEN + + LK D G I
Sbjct: 179 LPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT----EEQLKLIDLGAVSRI--- 231
Query: 271 KKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE--VL 328
F + G+ + APE+++ +D++++G L + DG+ ++ VL
Sbjct: 232 NSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVL 291
Query: 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369
+ + R +++ + DPR R T A+ +S
Sbjct: 292 KTYDSYGR------------LLRRAIDPDPRQRFTTAEEMS 320
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 103/229 (44%), Gaps = 31/229 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G GQFG ++ N D+VA+K I + M + ED E +++ L+ H +V+ Y
Sbjct: 18 IGSGQFGLVHLGY-WLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPKLVQLY 71
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ + + E E G L D + + + L + D V M
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLD----------VCEGM 119
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY-- 281
+ C ++HRD+ N L E+ +K +DFG++ F+ ++ G+ +
Sbjct: 120 AYLEEAC----VIHRDLAARNCL---VGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPV 171
Query: 282 -YVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 327
+ +PEV + +SDVWS GV+ + + G+ P+ +++ + +++
Sbjct: 172 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 220
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 35/225 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T+ LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 70
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ + YI E G LLD + ++ E A V
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYL------------------RECNRQEVSAVV 112
Query: 219 VVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
++ ++++ +HRD+ N L E+ +K DFGLS + G +
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTA 168
Query: 276 IVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
G+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 89/219 (40%), Gaps = 35/219 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G FG + DK G + AVKK+ +E + E + A +V Y
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVR---------LEVFRVEELVACAGLSSPRIVPLY 130
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
A + +V I MEL EGG L I++ E A + Q
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQ-----------------LIKQMGCLPEDRALYYLGQA 173
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP---GKKFQD---IV 277
L H ++H D+K +N L S ++L DFG + ++P GK I
Sbjct: 174 LEGLEYLHTRRILHGDVKADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIP 231
Query: 278 GSAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPF 315
G+ ++APE V+ + + D+WS + +L G P+
Sbjct: 232 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 35/220 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 75
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ YI E G LLD + ++ E A V++
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYL------------------RECNRQEVSAVVLLYMA 117
Query: 224 LRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 280
++++ +HRD+ N L E+ +K DFGLS + G + G+
Sbjct: 118 TQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAGAK 173
Query: 281 Y---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
+ + APE L K +SDVW+ GV+ + I G P+
Sbjct: 174 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 103/229 (44%), Gaps = 31/229 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G GQFG ++ N D+VA+K I + M + ED E +++ L+ H +V+ Y
Sbjct: 16 IGSGQFGLVHLGY-WLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPKLVQLY 69
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ + + E E G L D + + + L + D V M
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLD----------VCEGM 117
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY-- 281
+ C ++HRD+ N L E+ +K +DFG++ F+ ++ G+ +
Sbjct: 118 AYLEEAC----VIHRDLAARNCL---VGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPV 169
Query: 282 -YVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 327
+ +PEV + +SDVWS GV+ + + G+ P+ +++ + +++
Sbjct: 170 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 218
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 35/225 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T+ LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N
Sbjct: 17 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 71
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ + YI +E G LLD + ++ E +A V
Sbjct: 72 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL------------------RECNRQEVNAVV 113
Query: 219 VVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
++ ++++ +HRD+ N L E+ +K DFGLS + G
Sbjct: 114 LLYMATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTXTA 169
Query: 276 IVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
G+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 170 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 92/220 (41%), Gaps = 35/220 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQFG Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 73
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ YI E G LLD + ++ E A V++
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYL------------------RECNRQEVSAVVLLYMA 115
Query: 224 LRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 280
++++ +HRD+ N L E+ +K DFGLS + G G+
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTXTAHAGAK 171
Query: 281 Y---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
+ + APE L K +SDVW+ GV+ + I G P+
Sbjct: 172 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 407 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 466
+ +A L +EE+ L++ F ID D +G+I+ +E++ L K + +L ES + +++ A D
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGL-KRVGSELMESEIKDLMDAAD 69
Query: 467 CNTDGLVDFSEFVAATLH 484
+ G +D+ EF+AAT+H
Sbjct: 70 IDKSGTIDYGEFIAATVH 87
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 10/55 (18%)
Query: 504 FEKFDIDRDGFITPEELRMHTGLK--GS------IDPLLEEADIDKDGRISLSEF 550
F+ D D G IT +EL+ GLK GS I L++ ADIDK G I EF
Sbjct: 29 FKMIDTDNSGTITFDELK--DGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEF 81
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 123/338 (36%), Gaps = 83/338 (24%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY I LG G FG D G R KI KN + E + E+++L+ L
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN---VDRYCEAARSEIQVLEHLNTT 71
Query: 157 E-----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
+ V+ FE ++ I EL L + FL R D +
Sbjct: 72 DPNSTFRCVQMLEWFEHHGHICIVFEL----------LGLSTYDFIKENGFLPFRLD--H 119
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF-----------KSAKEDSSL---- 256
K A Q+ + H + L H D+KPEN LF K +++ +L
Sbjct: 120 IRKMAY----QICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPD 175
Query: 257 -KATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIG--VITYILLCGR 312
K DFG + + + +V + +Y APEV L DVWSIG +I Y L
Sbjct: 176 IKVVDFGSATY--DDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTV 233
Query: 313 RPFWDKTED-GIFKEVLRNKPDFR-------------RKPWPSISNSAK----------- 347
P D E + + +L P R W S++ +
Sbjct: 234 FPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKE 293
Query: 348 -------------DFVKKLLVKDPRARLTAAQALSHPW 372
D ++K+L DP R+T +AL HP+
Sbjct: 294 FMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPF 331
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 104/231 (45%), Gaps = 35/231 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G GQFG ++ N D+VA+K I + M + ED E +++ L+ H +V+ Y
Sbjct: 15 IGSGQFGLVHLGY-WLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPKLVQLY 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAK--MISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+ + + E E G L D + + + + L + + Y E+ +
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAS----- 123
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
++HRD+ N L E+ +K +DFG++ F+ ++ G+ +
Sbjct: 124 -------------VIHRDLAARNCL---VGENQVIKVSDFGMTRFVLD-DQYTSSTGTKF 166
Query: 282 ---YVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 327
+ +PEV + +SDVWS GV+ + + G+ P+ +++ + +++
Sbjct: 167 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 135/344 (39%), Gaps = 95/344 (27%)
Query: 97 RYTIGKLLGHGQFGYTYVATD-KANGDRVA---VKKIEKNKMILPIAVEDVKREVKILQA 152
RY I LG G FG D + G RVA +K +EK K E + E+ +L+
Sbjct: 34 RYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYK-------EAARLEINVLEK 86
Query: 153 L----AGHENV-VKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
+ ++N+ V+ ++ F+ ++ I+ EL L++ FL
Sbjct: 87 INEKDPDNKNLCVQMFDWFDYHGHMCISFEL----------------LGLSTFDFLKDNN 130
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA-----------KEDSSL 256
Y + Q+ + H + L H D+KPEN LF ++ +++ S+
Sbjct: 131 YLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSV 190
Query: 257 KAT-----DFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLC 310
K+T DFG + F + IV + +Y APEV L+ DVWSIG I +
Sbjct: 191 KSTAVRVVDFGSATF--DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYV 248
Query: 311 GRRPFWDKTEDG-----------------IFKEVLRNKPDFR-RKPWPSISNSAK----- 347
G F +T D + ++ + K +R R W +++ +
Sbjct: 249 GFTLF--QTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVREN 306
Query: 348 -------------------DFVKKLLVKDPRARLTAAQALSHPW 372
D ++ +L +P RLT +AL HP+
Sbjct: 307 CKPLRRYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPF 350
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 102/239 (42%), Gaps = 32/239 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
++ +G+ +G G FG Y+ T+ + VA+K +E K P + + K +ILQ G
Sbjct: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LENVKTKHPQLLYESK-IYRILQGGTGI 65
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
NV F E D Y + M+L + +L + RK S K
Sbjct: 66 PNVRWF--GVEGD-YNVLVMDL--------------LGPSLEDLFNFCSRKLSL---KTV 105
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-------- 268
++ QM+ H +HRD+KP+NFL + + + DFGL+ +
Sbjct: 106 LMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHI 165
Query: 269 PGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
P ++ +++ G+A Y + L + D+ S+G + L G P W + G K+
Sbjct: 166 PYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLP-WQGLKAGTKKQ 223
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 35/220 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 73
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ YI +E G LLD + ++ E A V++
Sbjct: 74 GVCTREPPFYIIIEFMTYGNLLDYL------------------RECNRQEVSAVVLLYMA 115
Query: 224 LRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 280
++++ +HRD+ N L E+ +K DFGLS + G G+
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTXTAHAGAK 171
Query: 281 Y---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
+ + APE L K +SDVW+ GV+ + I G P+
Sbjct: 172 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 104/229 (45%), Gaps = 31/229 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G GQFG ++ N D+VA+K I++ M + +D E +++ L+ H +V+ Y
Sbjct: 35 IGSGQFGLVHLGY-WLNKDKVAIKTIKEGSM----SEDDFIEEAEVMMKLS-HPKLVQLY 88
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ + + E E G L D + + + L + D V M
Sbjct: 89 GVCLEQAPICLVFEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLD----------VCEGM 136
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY-- 281
+ C ++HRD+ N L E+ +K +DFG++ F+ ++ G+ +
Sbjct: 137 AYLEEAC----VIHRDLAARNCL---VGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPV 188
Query: 282 -YVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 327
+ +PEV + +SDVWS GV+ + + G+ P+ +++ + +++
Sbjct: 189 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 237
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 95/229 (41%), Gaps = 22/229 (9%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQALAG 155
GK LG G FG AT G AV K+ KM+ A D K E+KI+ L
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAV-KMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
HEN+V A V + E C G+LL+ L + L ++ + + + + +D
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLN-FLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-------SDFIK 268
Q+ + A +HRD+ N L + K DFGL S++I
Sbjct: 168 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH---VAKIGDFGLARDIMNDSNYIV 224
Query: 269 PGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 315
G + ++APE + +SDVWS G++ + I G P+
Sbjct: 225 KGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 269
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 100/253 (39%), Gaps = 42/253 (16%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG- 155
I +++G G+FG K G R VA+K ++ E +R+ ++ G
Sbjct: 11 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY------TEKQRRDFLSEASIMGQ 64
Query: 156 --HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H NV+ V I E E G L D L + D ++T
Sbjct: 65 FDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQ---------------NDGQFTV 108
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK---PG 270
++R + VHR + N L S + K +DFGLS F++
Sbjct: 109 IQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNS---NLVCKVSDFGLSRFLEDDTSD 165
Query: 271 KKFQDIVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFK 325
+ +G + APE ++ RK SDVWS G++ + ++ G RP+WD T +
Sbjct: 166 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN 225
Query: 326 EVLRNKPDFRRKP 338
+ + D+R P
Sbjct: 226 AI---EQDYRLPP 235
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 35/225 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T+ LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 75
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ + YI E G LLD + ++ E +A V
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYL------------------RECNRQEVNAVV 117
Query: 219 VVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
++ ++++ +HRD+ N L E+ +K DFGLS + G
Sbjct: 118 LLYMATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTXTA 173
Query: 276 IVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
G+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 120/315 (38%), Gaps = 57/315 (18%)
Query: 86 TDFGYDK--DFDR-RYTIGKLLGHGQFG-------YTYVATDKANGDRVAVKKIEKNKMI 135
T YD +F R R + GK LG G FG Y + +D A VAVK ++ + +
Sbjct: 33 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAM--TVAVKMLKPSAHL 90
Query: 136 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMIST 195
E + E+K+L L H N+V A + E C G+LL+
Sbjct: 91 --TEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN--------- 139
Query: 196 TLTSAWFLAIRKDSRYTEKDAAVVVR----------------QMLRVAAECHLHGLVHRD 239
FL ++DS K + ++ Q+ + A +HRD
Sbjct: 140 ------FLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRD 193
Query: 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPE-VLKRKSGP 294
+ N L + K DFGL+ IK + + G+A ++APE +
Sbjct: 194 LAARNILLTHGRIT---KICDFGLARHIKNDSNYV-VKGNARLPVKWMAPESIFNCVYTF 249
Query: 295 ESDVWSIGVITYILL-CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 353
ESDVWS G+ + L G P+ D F +++ K FR D +K
Sbjct: 250 ESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI--KEGFRMLSPEHAPAEMYDIMKTC 307
Query: 354 LVKDPRARLTAAQAL 368
DP R T Q +
Sbjct: 308 WDADPLKRPTFKQIV 322
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 89/219 (40%), Gaps = 35/219 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G FG + DK G + AVKK+ +E + E + A +V Y
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVR---------LEVFRVEELVACAGLSSPRIVPLY 116
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
A + +V I MEL EGG L I++ E A + Q
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQ-----------------LIKQMGCLPEDRALYYLGQA 159
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP---GKKFQD---IV 277
L H ++H D+K +N L S ++L DFG + ++P GK I
Sbjct: 160 LEGLEYLHTRRILHGDVKADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIP 217
Query: 278 GSAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPF 315
G+ ++APE V+ + + D+WS + +L G P+
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 33/217 (15%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG Y G++VAVK ++ IA D+K+E++IL+ L HEN+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA--DLKKEIEILRNLY-HENI 85
Query: 160 VKFYNAFEDD--NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VK+ +D N + + ME G L + + L A++
Sbjct: 86 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQ----------- 134
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ + M + + + VHRD+ N L +S + +K DFGL+ I+ K+ +
Sbjct: 135 -ICKGMDYLGSRQY----VHRDLAARNVLVES---EHQVKIGDFGLTKAIETDKEXXTVK 186
Query: 278 ----GSAYYVAPEVL-KRKSGPESDVWSIGVITYILL 309
++ APE L + K SDVWS GV + LL
Sbjct: 187 DDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 89/219 (40%), Gaps = 35/219 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G FG + DK G + AVKK+ +E + E + A +V Y
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVR---------LEVFRVEELVACAGLSSPRIVPLY 132
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
A + +V I MEL EGG L I++ E A + Q
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQ-----------------LIKQMGCLPEDRALYYLGQA 175
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP---GKKFQD---IV 277
L H ++H D+K +N L S ++L DFG + ++P GK I
Sbjct: 176 LEGLEYLHTRRILHGDVKADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIP 233
Query: 278 GSAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPF 315
G+ ++APE V+ + + D+WS + +L G P+
Sbjct: 234 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 117/256 (45%), Gaps = 46/256 (17%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVK--KIEKNKMILPIAVEDVKREV 147
+D F++ IG+L+G G+FG Y + +G+ VA++ IE++ ++ KREV
Sbjct: 28 WDIPFEQ-LEIGELIGKGRFGQVY--HGRWHGE-VAIRLIDIERDN---EDQLKAFKREV 80
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
+ HENVV F A ++ I LC+G R L ++ I
Sbjct: 81 MAYRQ-TRHENVVLFMGACMSPPHLAIITSLCKG-----RTLYSVVRDA-------KIVL 127
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL---S 264
D T + A +V+ M H G++H+D+K +N + + K + TDFGL S
Sbjct: 128 DVNKTRQIAQEIVKGM----GYLHAKGILHKDLKSKNVFYDNGK----VVITDFGLFSIS 179
Query: 265 DFIKPGK---KFQDIVGSAYYVAPEVLKRKS----------GPESDVWSIGVITYILLCG 311
++ G+ K + G ++APE++++ S SDV+++G I Y L
Sbjct: 180 GVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAR 239
Query: 312 RRPFWDKTEDGIFKEV 327
PF + + I ++
Sbjct: 240 EWPFKTQPAEAIIWQM 255
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 17/159 (10%)
Query: 384 IDISVLNNMRQFVKYSRLKQFALRALASTLD--DEELADLRDQFDAIDVDKNGSISLEEM 441
I +VLNNM+ ++K+S ++ + +A L + + + + F +D + NGS+S E+
Sbjct: 2 ISPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREI 61
Query: 442 RQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ 501
LA +K+ + ILQA+D N G + ++EF+A +E +
Sbjct: 62 YTVLAS---VGIKKWDINRILQALDINDRGNITYTEFMAGCYRWKNIES-------TFLK 111
Query: 502 AAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADID 540
AAF K D D DG+I+ ++ + D +L+ DID
Sbjct: 112 AAFNKIDKDEDGYISKSDI-----VSLVHDKVLDNNDID 145
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 33/217 (15%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG Y G++VAVK ++ IA D+K+E++IL+ L HEN+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA--DLKKEIEILRNLY-HENI 73
Query: 160 VKFYNAFEDD--NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
VK+ +D N + + ME G L + + L A++
Sbjct: 74 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQ----------- 122
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ + M + + + VHRD+ N L +S + +K DFGL+ I+ K+ +
Sbjct: 123 -ICKGMDYLGSRQY----VHRDLAARNVLVES---EHQVKIGDFGLTKAIETDKEXXTVK 174
Query: 278 ----GSAYYVAPEVL-KRKSGPESDVWSIGVITYILL 309
++ APE L + K SDVWS GV + LL
Sbjct: 175 DDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 110/272 (40%), Gaps = 44/272 (16%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG+GQFG ++ T N +VA+K ++ M + E E +I++ L H+ +V+
Sbjct: 15 KRLGNGQFGEVWMGTWNGN-TKVAIKTLKPGTM----SPESFLEEAQIMKKLK-HDKLVQ 68
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
Y A + +YI E G LLD FL + + +
Sbjct: 69 LY-AVVSEEPIYIVTEYMNKGSLLD---------------FLKDGEGRALKLPNLVDMAA 112
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQ 274
Q+ A +HRD++ N L + K DFGL+ I + G KF
Sbjct: 113 QVAAGMAYIERMNYIHRDLRSANILVGNG---LICKIADFGLARLIEDNEXTARQGAKF- 168
Query: 275 DIVGSAYYVAPE-VLKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
+ APE L + +SDVWS G+ +T ++ GR P+ + ++V R
Sbjct: 169 ----PIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG-- 222
Query: 333 DFRRKPWPS-ISNSAKDFVKKLLVKDPRARLT 363
R P P S + + KDP R T
Sbjct: 223 --YRMPCPQDCPISLHELMIHCWKKDPEERPT 252
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 119/315 (37%), Gaps = 57/315 (18%)
Query: 86 TDFGYDKDFD---RRYTIGKLLGHGQFG-------YTYVATDKANGDRVAVKKIEKNKMI 135
T YD ++ R + GK LG G FG Y + +D A VAVK ++ + +
Sbjct: 26 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAM--TVAVKMLKPSAHL 83
Query: 136 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMIST 195
E + E+K+L L H N+V A + E C G+LL+
Sbjct: 84 --TEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN--------- 132
Query: 196 TLTSAWFLAIRKDSRYTEKDAAVVVR----------------QMLRVAAECHLHGLVHRD 239
FL ++DS K + ++ Q+ + A +HRD
Sbjct: 133 ------FLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRD 186
Query: 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPE-VLKRKSGP 294
+ N L + K DFGL+ IK + + G+A ++APE +
Sbjct: 187 LAARNILLTHGRIT---KICDFGLARDIKNDSNYV-VKGNARLPVKWMAPESIFNCVYTF 242
Query: 295 ESDVWSIGVITYILL-CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 353
ESDVWS G+ + L G P+ D F +++ K FR D +K
Sbjct: 243 ESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI--KEGFRMLSPEHAPAEMYDIMKTC 300
Query: 354 LVKDPRARLTAAQAL 368
DP R T Q +
Sbjct: 301 WDADPLKRPTFKQIV 315
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 470
S L +E +A+ + FD D D G IS++E+ + + L + + I++ +D +
Sbjct: 9 SYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVM-RMLGQTPTKEELDAIIEEVDEDGS 67
Query: 471 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-- 528
G +DF EF+ + V Q++E K F FD + DG+I EEL G
Sbjct: 68 GTIDFEEFL--VMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEH 125
Query: 529 ----SIDPLLEEADIDKDGRISLSEFRRLLR 555
I+ L+++ D + DGRI EF +++
Sbjct: 126 VTDEEIESLMKDGDKNNDGRIDFDEFLKMME 156
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 119/313 (38%), Gaps = 57/313 (18%)
Query: 86 TDFGYDK--DFDR-RYTIGKLLGHGQFG-------YTYVATDKANGDRVAVKKIEKNKMI 135
T YD +F R R + GK LG G FG Y + +D A VAVK ++ + +
Sbjct: 10 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAM--TVAVKMLKPSAHL 67
Query: 136 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMIST 195
E + E+K+L L H N+V A + E C G+LL+
Sbjct: 68 --TEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN--------- 116
Query: 196 TLTSAWFLAIRKDSRYTEKDAAVVVR----------------QMLRVAAECHLHGLVHRD 239
FL ++DS K + ++ Q+ + A +HRD
Sbjct: 117 ------FLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRD 170
Query: 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY----YVAPE-VLKRKSGP 294
+ N L + K DFGL+ IK + + G+A ++APE +
Sbjct: 171 LAARNILLTHGRIT---KICDFGLARDIKNDSNYV-VKGNARLPVKWMAPESIFNCVYTF 226
Query: 295 ESDVWSIGVITYILL-CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 353
ESDVWS G+ + L G P+ D F +++ K FR D +K
Sbjct: 227 ESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI--KEGFRMLSPEHAPAEMYDIMKTC 284
Query: 354 LVKDPRARLTAAQ 366
DP R T Q
Sbjct: 285 WDADPLKRPTFKQ 297
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 122/338 (36%), Gaps = 83/338 (24%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY I LG G FG D G R KI KN + E + E+++L+ L
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN---VDRYCEAARSEIQVLEHLNTT 71
Query: 157 E-----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
+ V+ FE ++ I EL L + FL R D +
Sbjct: 72 DPNSTFRCVQMLEWFEHHGHICIVFEL----------LGLSTYDFIKENGFLPFRLD--H 119
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF-----------KSAKEDSSL---- 256
K A Q+ + H + L H D+KPEN LF K +++ +L
Sbjct: 120 IRKMAY----QICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPD 175
Query: 257 -KATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIG--VITYILLCGR 312
K DFG + + + +V +Y APEV L DVWSIG +I Y L
Sbjct: 176 IKVVDFGSATY--DDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTV 233
Query: 313 RPFWDKTED-GIFKEVLRNKPDFR-------------RKPWPSISNSAK----------- 347
P D E + + +L P R W S++ +
Sbjct: 234 FPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKE 293
Query: 348 -------------DFVKKLLVKDPRARLTAAQALSHPW 372
D ++K+L DP R+T +AL HP+
Sbjct: 294 FMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPF 331
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 88/227 (38%), Gaps = 33/227 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY I LG G FG D A G KI +N + E + E+ +L+ +
Sbjct: 29 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN---VGKYREAARLEINVLKKIKEK 85
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ KF D + + +C ELL + + FL Y
Sbjct: 86 DKENKFLCVLMSDWFNFHG-HMCIAFELLGK----------NTFEFLKENNFQPYPLPHV 134
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLF------------KSAKE----DSSLKATD 260
+ Q+ H + L H D+KPEN LF KS +E ++S++ D
Sbjct: 135 RHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVAD 194
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITY 306
FG + F + IV + +Y PEV L+ DVWSIG I +
Sbjct: 195 FGSATF--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILF 239
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 83/153 (54%), Gaps = 12/153 (7%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E+ ++R+ FD D D +G+I +E++ A+ + L ++ K+ + +++ ID + G
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAM-RALGFEPKKEEIKKMIADIDKDGSGT 60
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG---- 528
+DF EF+ + ++ E DS + ++ AF FD D G I+ + L+ G
Sbjct: 61 IDFEEFL--QMMTAKMGERDSREEIMK---AFRLFDDDETGKISFKNLKRVAKELGENMT 115
Query: 529 --SIDPLLEEADIDKDGRISLSEFRRLLRTASI 559
+ +++EAD D DG ++ EF R+++ S+
Sbjct: 116 DEELQEMIDEADRDGDGEVNEEEFFRIMKKTSL 148
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 109/264 (41%), Gaps = 39/264 (14%)
Query: 78 GVIPCGK-RTDFGYDKDFD-RRYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKN 132
G++P G +T + K+ D +I K++G G+FG K + VA+K ++
Sbjct: 13 GLVPRGSTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 72
Query: 133 KMILPIAVEDVKREVKILQALAG---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRIL 189
E +R+ ++ G H N+++ V I E E G L D L
Sbjct: 73 Y------TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFL 125
Query: 190 AKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249
K D+++T ++R + G VHRD+ N L S
Sbjct: 126 RK---------------HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 170
Query: 250 AKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVI 304
+ K +DFGLS ++ P + G + +PE + RK SDVWS G++
Sbjct: 171 ---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 227
Query: 305 TY-ILLCGRRPFWDKTEDGIFKEV 327
+ ++ G RP+W+ + + K V
Sbjct: 228 LWEVMSYGERPYWEMSNQDVIKAV 251
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 88/227 (38%), Gaps = 33/227 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY I LG G FG D A G KI +N + E + E+ +L+ +
Sbjct: 20 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN---VGKYREAARLEINVLKKIKEK 76
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ KF D + + +C ELL + + FL Y
Sbjct: 77 DKENKFLCVLMSDWFNFHG-HMCIAFELLGK----------NTFEFLKENNFQPYPLPHV 125
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLF------------KSAKE----DSSLKATD 260
+ Q+ H + L H D+KPEN LF KS +E ++S++ D
Sbjct: 126 RHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVAD 185
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITY 306
FG + F + IV + +Y PEV L+ DVWSIG I +
Sbjct: 186 FGSATF--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILF 230
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 119/313 (38%), Gaps = 57/313 (18%)
Query: 86 TDFGYDK--DFDR-RYTIGKLLGHGQFG-------YTYVATDKANGDRVAVKKIEKNKMI 135
T YD +F R R + GK LG G FG Y + +D A VAVK ++ + +
Sbjct: 28 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAM--TVAVKMLKPSAHL 85
Query: 136 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMIST 195
E + E+K+L L H N+V A + E C G+LL+
Sbjct: 86 --TEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN--------- 134
Query: 196 TLTSAWFLAIRKDSRYTEKDAAVVVR----------------QMLRVAAECHLHGLVHRD 239
FL ++DS K + ++ Q+ + A +HRD
Sbjct: 135 ------FLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRD 188
Query: 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPE-VLKRKSGP 294
+ N L + K DFGL+ IK + + G+A ++APE +
Sbjct: 189 LAARNILLTHGRIT---KICDFGLARDIKNDSNYV-VKGNARLPVKWMAPESIFNCVYTF 244
Query: 295 ESDVWSIGVITYILL-CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 353
ESDVWS G+ + L G P+ D F +++ K FR D +K
Sbjct: 245 ESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI--KEGFRMLSPEHAPAEMYDIMKTC 302
Query: 354 LVKDPRARLTAAQ 366
DP R T Q
Sbjct: 303 WDADPLKRPTFKQ 315
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 127/329 (38%), Gaps = 69/329 (20%)
Query: 101 GKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
G +G G +G+ Y A K D A+K+IE + + RE+ +L+ L H N
Sbjct: 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSAC-----REIALLRELK-HPN 79
Query: 159 VVKFYNAF--EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
V+ F D V++ + E L +I S A +K +
Sbjct: 80 VISLQKVFLSHADRKVWLLFDYAEHD------LWHIIKFHRASK---ANKKPVQLPRGMV 130
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFL-FKSAKEDSSLKATDFGLSDF----IKPGK 271
++ Q+L H + ++HRD+KP N L E +K D G + +KP
Sbjct: 131 KSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLA 190
Query: 272 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED-------- 321
+V + +Y APE+L R D+W+IG I LL F + ED
Sbjct: 191 DLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYH 250
Query: 322 -----GIFK----------EVLRNKP-------DFRRKPWPSIS-------------NSA 346
IF E ++ P DFRR + + S + A
Sbjct: 251 HDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKA 310
Query: 347 KDFVKKLLVKDPRARLTAAQALSHPWVRE 375
++KLL DP R+T+ QA+ P+ E
Sbjct: 311 FHLLQKLLTMDPIKRITSEQAMQDPYFLE 339
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 106/267 (39%), Gaps = 60/267 (22%)
Query: 102 KLLGHGQFGYTYVATDKANGDR----VAVKKI-----EKNKMILPIAVEDVKREVKILQA 152
K++G G+FG Y K + + VA+K + EK ++ D E I+
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV-------DFLGEAGIMGQ 102
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
+ H N+++ + I E E G L D
Sbjct: 103 FS-HHNIIRLEGVISKYKPMMIITEYMENGAL-----------------------DKFLR 138
Query: 213 EKDAAVVVRQ---MLR--VAAECHLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSD 265
EKD V Q MLR A +L + VHRD+ N L S + K +DFGLS
Sbjct: 139 EKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNS---NLVCKVSDFGLSR 195
Query: 266 FIK--PGKKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 319
++ P + G + APE + RK SDVWS G++ + ++ G RP+W+ +
Sbjct: 196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS 255
Query: 320 EDGIFKEVLRNKPDFRRKPWPSISNSA 346
EV++ D R P P SA
Sbjct: 256 N----HEVMKAINDGFRLPTPMDCPSA 278
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 120/315 (38%), Gaps = 57/315 (18%)
Query: 86 TDFGYDK--DFDR-RYTIGKLLGHGQFG-------YTYVATDKANGDRVAVKKIEKNKMI 135
T YD +F R R + GK LG G FG Y + +D A VAVK ++ + +
Sbjct: 33 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAM--TVAVKMLKPSAHL 90
Query: 136 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMIST 195
E + E+K+L L H N+V A + E C G+LL+
Sbjct: 91 --TEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN--------- 139
Query: 196 TLTSAWFLAIRKDSRYTEKDAAVVVR----------------QMLRVAAECHLHGLVHRD 239
FL ++DS K + ++ Q+ + A +HRD
Sbjct: 140 ------FLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRD 193
Query: 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPE-VLKRKSGP 294
+ N L + K DFGL+ IK + + G+A ++APE +
Sbjct: 194 LAARNILLTHGRIT---KICDFGLARDIKNDSNYV-VKGNARLPVKWMAPESIFNCVYTF 249
Query: 295 ESDVWSIGVITYILL-CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 353
ESDVWS G+ + L G P+ D F +++ K FR D +K
Sbjct: 250 ESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI--KEGFRMLSPEHAPAEMYDIMKTC 307
Query: 354 LVKDPRARLTAAQAL 368
DP R T Q +
Sbjct: 308 WDADPLKRPTFKQIV 322
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 88/227 (38%), Gaps = 33/227 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY I LG G FG D A G KI +N + E + E+ +L+ +
Sbjct: 52 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN---VGKYREAARLEINVLKKIKEK 108
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ KF D + + +C ELL + + FL Y
Sbjct: 109 DKENKFLCVLMSDWFNFHG-HMCIAFELLGK----------NTFEFLKENNFQPYPLPHV 157
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLF------------KSAKE----DSSLKATD 260
+ Q+ H + L H D+KPEN LF KS +E ++S++ D
Sbjct: 158 RHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVAD 217
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITY 306
FG + F + IV + +Y PEV L+ DVWSIG I +
Sbjct: 218 FGSATF--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILF 262
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 39/256 (15%)
Query: 104 LGHGQFGYTYVA-----TDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
LG G FG ++A + + VAVK ++ A +D RE ++L L HE+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQ-HEH 76
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+VKFY + + + + E + G+L + A L + + T+
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEG----NPPTELTQSQMLH 132
Query: 219 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 278
+ +Q+ VHRD+ N L E+ +K DFG+S +D+
Sbjct: 133 IAQQIAAGMVYLASQHFVHRDLATRNCL---VGENLLVKIGDFGMS---------RDVYS 180
Query: 279 SAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIF 324
+ YY + PE ++ RK ESDVWS+GV+ + I G++P++ + + +
Sbjct: 181 TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI 240
Query: 325 KEVLRNKPDFRRKPWP 340
+ + + + R + P
Sbjct: 241 ECITQGRVLQRPRTCP 256
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 97/228 (42%), Gaps = 31/228 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+Y +G+ +G G FG Y+ + A+G+ VA+K +E K P + E K + + G
Sbjct: 10 KYRLGRKIGSGSFGDIYLGANIASGEEVAIK-LECVKTKHP----QLHIESKFYKMMQGG 64
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ + +Y + MEL + +L + RK ++ K
Sbjct: 65 VGIPSIKWCGAEGDYNVMVMEL--------------LGPSLEDLFNFCSRK---FSLKTV 107
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-------- 268
++ QM+ H +HRD+KP+NFL K+ + + DFGL+ +
Sbjct: 108 LLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI 167
Query: 269 PGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF 315
P ++ +++ G+A Y + L + D+ S+G + G P+
Sbjct: 168 PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 215
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 106/270 (39%), Gaps = 44/270 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 16 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 68
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
Y ++ + I E G LLD FL + Q
Sbjct: 69 YAVVSEEP-IXIVTEYMSKGSLLD---------------FLKGETGKYLRLPQLVDMAAQ 112
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQD 275
+ A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 113 IASGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEXTARQGAKF-- 167
Query: 276 IVGSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
+ APE L + +SDVWS G+ +T + GR P+ + +V R
Sbjct: 168 ---PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG--- 221
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLT 363
+R P S D + + K+P R T
Sbjct: 222 YRMPCPPECPESLHDLMCQCWRKEPEERPT 251
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 32/225 (14%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKI------EKNKMILPIAVEDVKREVKILQALAG 155
K +G G FG + + VA+K + + +MI ++ +REV I+ L
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE--KFQEFQREVFIMSNL-N 81
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
H N+VK Y N + ME G+L R+L K W + +R D
Sbjct: 82 HPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLLDKAHPIK----WSVKLR-----LMLD 130
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL--KATDFGLSDFIKPGKKF 273
A+ + M +VHRD++ N +S E++ + K DFGLS +
Sbjct: 131 IALGIEYMQNQNPP-----IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSV 183
Query: 274 QDIVGSAYYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPF 315
++G+ ++APE + + ++D +S +I Y +L G PF
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 82/147 (55%), Gaps = 12/147 (8%)
Query: 415 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 474
+E+ ++R+ FD D D G+I ++E++ A+ + L ++ K+ + +++ ID G ++
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAM-RALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 475 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------ 528
F +F+ T+ ++ E D+++ L+ AF+ FD D G I+ + L+ G
Sbjct: 61 FGDFL--TVMTQKMSEKDTKEEILK---AFKLFDDDETGKISFKNLKRVAKELGENLTDE 115
Query: 529 SIDPLLEEADIDKDGRISLSEFRRLLR 555
+ +++EAD D DG +S EF R+++
Sbjct: 116 ELQEMIDEADRDGDGEVSEQEFLRIMK 142
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 31/222 (13%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T K LG GQFG + D VA+K I++ M + ++ E K++ L+ HE
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM----SEDEFIEEAKVMMNLS-HEK 60
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ Y ++I E G LL+ + + + + L + KD
Sbjct: 61 LVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKD---------- 108
Query: 219 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 278
V M + ++ +HRD+ N L + +K +DFGLS ++ ++ VG
Sbjct: 109 VCEAMEYLESK----QFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVL-DDEYTSSVG 160
Query: 279 SAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
S + + PEVL K +SD+W+ GV+ + I G+ P+
Sbjct: 161 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 202
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 98/241 (40%), Gaps = 37/241 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+I K++G G+FG K + VA+K ++ E +R+ ++ G
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG------YTEKQRRDFLGEASIMG 101
Query: 156 ---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
H N+++ V I E E G L D L K D+++T
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRK---------------HDAQFT 145
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PG 270
++R + G VHRD+ N L S + K +DFGLS ++ P
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPE 202
Query: 271 KKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKE 326
+ G + +PE + RK SDVWS G++ + ++ G RP+W+ + + K
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 262
Query: 327 V 327
V
Sbjct: 263 V 263
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 108/239 (45%), Gaps = 51/239 (21%)
Query: 104 LGHGQFGYTYVA-----TDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
LG G FG ++A + + VAVK +++ A +D +RE ++L L H++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTMLQ-HQH 104
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+F+ + + + E G+L + + + A LA +D +
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDL-----NRFLRSHGPDAKLLAGGEDV----APGPL 155
Query: 219 VVRQMLRVAAEC-----HLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
+ Q+L VA++ +L GL VHRD+ N L + +K DFG+S
Sbjct: 156 GLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCL---VGQGLVVKIGDFGMS------- 205
Query: 272 KFQDIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFW 316
+DI + YY + PE +L RK ESDVWS GV+ + I G++P++
Sbjct: 206 --RDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 262
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 31/222 (13%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T K LG GQFG + D VA+K I++ M + ++ E K++ L+ HE
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM----SEDEFIEEAKVMMNLS-HEK 80
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ Y ++I E G LL+ + + + + L + KD
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKD---------- 128
Query: 219 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 278
V M + ++ LH RD+ N L + +K +DFGLS ++ ++ VG
Sbjct: 129 VCEAMEYLESKQFLH----RDLAARNCL---VNDQGVVKVSDFGLSRYVL-DDEYTSSVG 180
Query: 279 SAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
S + + PEVL K +SD+W+ GV+ + I G+ P+
Sbjct: 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 124/287 (43%), Gaps = 47/287 (16%)
Query: 103 LLGHGQFGYTYVATDKANGDRV--AVKKIEKNKMILPIAVEDVKR----EVKILQALAGH 156
++G G FG A K +G R+ A+K++++ A +D R E+++L L H
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKE------YASKDDHRDFAGELEVLCKLGHH 85
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLD-----RIL--------AKMISTTLTSAWFL 203
N++ A E Y+Y+A+E G LLD R+L A ++TL+S L
Sbjct: 86 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 145
Query: 204 AIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263
AA V R M ++ + +HRD+ N L E+ K DFGL
Sbjct: 146 HF----------AADVARGMDYLSQK----QFIHRDLAARNIL---VGENYVAKIADFGL 188
Query: 264 SDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITY-ILLCGRRPFWDKTED 321
S + K ++A E L SDVWS GV+ + I+ G P+ T
Sbjct: 189 SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA 248
Query: 322 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368
+++++ + +R + + + D +++ + P R + AQ L
Sbjct: 249 ELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 292
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 31/222 (13%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T K LG GQFG + D VA+K I++ M + ++ E K++ L+ HE
Sbjct: 11 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM----SEDEFIEEAKVMMNLS-HEK 64
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ Y ++I E G LL+ + + + + L + KD
Sbjct: 65 LVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKD---------- 112
Query: 219 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 278
V M + ++ +HRD+ N L + +K +DFGLS ++ ++ VG
Sbjct: 113 VCEAMEYLESK----QFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVL-DDEYTSSVG 164
Query: 279 SAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
S + + PEVL K +SD+W+ GV+ + I G+ P+
Sbjct: 165 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 206
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 31/222 (13%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T K LG GQFG + D VA+K I++ M + ++ E K++ L+ HE
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM----SEDEFIEEAKVMMNLS-HEK 65
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ Y ++I E G LL+ + + + + L + KD E +
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDV--CEAMEYL 121
Query: 219 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 278
+Q L HRD+ N L + +K +DFGLS ++ ++ VG
Sbjct: 122 ESKQFL------------HRDLAARNCL---VNDQGVVKVSDFGLSRYVLD-DEYTSSVG 165
Query: 279 SAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
S + + PEVL K +SD+W+ GV+ + I G+ P+
Sbjct: 166 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 124/287 (43%), Gaps = 47/287 (16%)
Query: 103 LLGHGQFGYTYVATDKANGDRV--AVKKIEKNKMILPIAVEDVKR----EVKILQALAGH 156
++G G FG A K +G R+ A+K++++ A +D R E+++L L H
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKE------YASKDDHRDFAGELEVLCKLGHH 75
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLD-----RIL--------AKMISTTLTSAWFL 203
N++ A E Y+Y+A+E G LLD R+L A ++TL+S L
Sbjct: 76 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 135
Query: 204 AIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263
AA V R M ++ + +HRD+ N L E+ K DFGL
Sbjct: 136 HF----------AADVARGMDYLSQK----QFIHRDLAARNIL---VGENYVAKIADFGL 178
Query: 264 SDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITY-ILLCGRRPFWDKTED 321
S + K ++A E L SDVWS GV+ + I+ G P+ T
Sbjct: 179 SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA 238
Query: 322 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368
+++++ + +R + + + D +++ + P R + AQ L
Sbjct: 239 ELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 282
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 91/227 (40%), Gaps = 38/227 (16%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG GQFG ++ N +VAVK ++ M +V+ E +++ L H+ +V+
Sbjct: 19 KRLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM----SVQAFLEEANLMKTLQ-HDKLVR 72
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
Y + +YI E G LLD FL + +
Sbjct: 73 LYAVVTREEPIYIITEYMAKGSLLD---------------FLKSDEGGKVLLPKLIDFSA 117
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQ 274
Q+ A +HRD++ N L E K DFGL+ I + G KF
Sbjct: 118 QIAEGMAYIERKNYIHRDLRAANVL---VSESLMCKIADFGLARVIEDNEYTAREGAKF- 173
Query: 275 DIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITY-ILLCGRRPFWDKT 319
+ APE + +SDVWS G++ Y I+ G+ P+ +T
Sbjct: 174 ----PIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRT 216
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 92/216 (42%), Gaps = 35/216 (16%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG GQFG ++AT + +VAVK ++ M +VE E +++ L H+ +VK
Sbjct: 188 KKLGAGQFGEVWMATYNKH-TKVAVKTMKPGSM----SVEAFLAEANVMKTLQ-HDKLVK 241
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+ + +YI E G LLD FL + S+
Sbjct: 242 LHAVVTKEP-IYIITEFMAKGSLLD---------------FLKSDEGSKQPLPKLIDFSA 285
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q+ A +HRD++ N L ++ K DFGL+ + G KF
Sbjct: 286 QIAEGMAFIEQRNYIHRDLRAANILVSAS---LVCKIADFGLA---RVGAKF-----PIK 334
Query: 282 YVAPEVLKRKSGP-ESDVWSIGVITY-ILLCGRRPF 315
+ APE + S +SDVWS G++ I+ GR P+
Sbjct: 335 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY 370
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 101/244 (41%), Gaps = 45/244 (18%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQFG ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 29 LGAGQFGEVWMGY--YNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 81
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
Y + +YI E E G L+D FL + T + Q
Sbjct: 82 YAVVTQEP-IYIITEYMENGSLVD---------------FLKTPSGIKLTINKLLDMAAQ 125
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQD 275
+ A +HRD++ N L + S K DFGL+ I + G KF
Sbjct: 126 IAEGMAFIEERNYIHRDLRAANIL---VSDTLSCKIADFGLARLIEDNEXTAREGAKF-- 180
Query: 276 IVGSAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN--- 330
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R
Sbjct: 181 ---PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 237
Query: 331 -KPD 333
+PD
Sbjct: 238 VRPD 241
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 94/230 (40%), Gaps = 30/230 (13%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQALAG 155
GK LG G FG AT G AV K+ KM+ A D K E+KI+ L
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAV-KMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE-K 214
HEN+V A V + E C G+LL+ L + L ++D R E +
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLN-FLRRKAEADLD-------KEDGRPLELR 160
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-------SDFI 267
D Q+ + A +HRD+ N L + K DFGL S++I
Sbjct: 161 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH---VAKIGDFGLARDIMNDSNYI 217
Query: 268 KPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 315
G + ++APE + +SDVWS G++ + I G P+
Sbjct: 218 VKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 263
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 94/230 (40%), Gaps = 30/230 (13%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQALAG 155
GK LG G FG AT G AV K+ KM+ A D K E+KI+ L
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAV-KMLKSTAHADEKEALMSELKIMSHLGQ 100
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE-K 214
HEN+V A V + E C G+LL+ L + L ++D R E +
Sbjct: 101 HENIVNLLGACTHGGPVLVITEYCCYGDLLN-FLRRKAEADLD-------KEDGRPLELR 152
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-------SDFI 267
D Q+ + A +HRD+ N L + K DFGL S++I
Sbjct: 153 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH---VAKIGDFGLARDIMNDSNYI 209
Query: 268 KPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 315
G + ++APE + +SDVWS G++ + I G P+
Sbjct: 210 VKGNARLPV----KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 255
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 31/222 (13%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T K LG GQFG + D VA+K I++ M + ++ E K++ L+ HE
Sbjct: 18 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM----SEDEFIEEAKVMMNLS-HEK 71
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ Y ++I E G LL+ + + + + L + KD E +
Sbjct: 72 LVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDV--CEAMEYL 127
Query: 219 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 278
+Q L HRD+ N L + +K +DFGLS ++ ++ VG
Sbjct: 128 ESKQFL------------HRDLAARNCL---VNDQGVVKVSDFGLSRYVLD-DEYTSSVG 171
Query: 279 SAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
S + + PEVL K +SD+W+ GV+ + I G+ P+
Sbjct: 172 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 213
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 108/239 (45%), Gaps = 51/239 (21%)
Query: 104 LGHGQFGYTYVA-----TDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
LG G FG ++A + + VAVK +++ A +D +RE ++L L H++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTMLQ-HQH 75
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+F+ + + + E G+L + + + A LA +D +
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDL-----NRFLRSHGPDAKLLAGGEDV----APGPL 126
Query: 219 VVRQMLRVAAEC-----HLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
+ Q+L VA++ +L GL VHRD+ N L + +K DFG+S
Sbjct: 127 GLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCL---VGQGLVVKIGDFGMS------- 176
Query: 272 KFQDIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFW 316
+DI + YY + PE +L RK ESDVWS GV+ + I G++P++
Sbjct: 177 --RDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 233
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 100/243 (41%), Gaps = 43/243 (17%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQFG ++ + +VAVK +++ M + + E +++ L H+ +V+ Y
Sbjct: 31 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRLY 84
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +YI E E G L+D FL + T + Q+
Sbjct: 85 AVVTQEP-IYIITEYMENGSLVD---------------FLKTPSGIKLTINKLLDMAAQI 128
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDI 276
A +HRD++ N L + S K DFGL+ I + G KF
Sbjct: 129 AEGMAFIEERNYIHRDLRAANIL---VSDTLSCKIADFGLARLIEDNEYTAREGAKF--- 182
Query: 277 VGSAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN---- 330
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R
Sbjct: 183 --PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 240
Query: 331 KPD 333
+PD
Sbjct: 241 RPD 243
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 99/247 (40%), Gaps = 49/247 (19%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+I K++G G+FG K + VA+K ++ E +R+ ++ G
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY------TEKQRRDFLGEASIMG 101
Query: 156 ---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
H N+++ V I E E G L D L K D+++T
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRK---------------HDAQFT 145
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 272
++R + G VHRD+ N L S + K +DFGL G+
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGL------GRV 196
Query: 273 FQDIVGSAY----------YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTE 320
+D +AY + +PE + RK SDVWS G++ + ++ G RP+W+ +
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
Query: 321 DGIFKEV 327
+ K V
Sbjct: 257 QDVIKAV 263
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 101/244 (41%), Gaps = 45/244 (18%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQFG ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 27 LGAGQFGEVWMGY--YNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 79
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
Y + +YI E E G L+D FL + T + Q
Sbjct: 80 YAVVTQEP-IYIITEYMENGSLVD---------------FLKTPSGIKLTINKLLDMAAQ 123
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQD 275
+ A +HRD++ N L + S K DFGL+ I + G KF
Sbjct: 124 IAEGMAFIEERNYIHRDLRAANIL---VSDTLSCKIADFGLARLIEDNEXTAREGAKF-- 178
Query: 276 IVGSAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN--- 330
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R
Sbjct: 179 ---PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 235
Query: 331 -KPD 333
+PD
Sbjct: 236 VRPD 239
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 101/244 (41%), Gaps = 45/244 (18%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQFG ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 30 LGAGQFGEVWMGY--YNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 82
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
Y + +YI E E G L+D FL + T + Q
Sbjct: 83 YAVVTQEP-IYIITEYMENGSLVD---------------FLKTPSGIKLTINKLLDMAAQ 126
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQD 275
+ A +HRD++ N L + S K DFGL+ I + G KF
Sbjct: 127 IAEGMAFIEERNYIHRDLRAANIL---VSDTLSCKIADFGLARLIEDNEXTAREGAKF-- 181
Query: 276 IVGSAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN--- 330
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R
Sbjct: 182 ---PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 238
Query: 331 -KPD 333
+PD
Sbjct: 239 VRPD 242
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 108/239 (45%), Gaps = 51/239 (21%)
Query: 104 LGHGQFGYTYVA-----TDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
LG G FG ++A + + VAVK +++ A +D +RE ++L L H++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTMLQ-HQH 81
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+F+ + + + E G+L + + + A LA +D +
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDL-----NRFLRSHGPDAKLLAGGEDV----APGPL 132
Query: 219 VVRQMLRVAAEC-----HLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
+ Q+L VA++ +L GL VHRD+ N L + +K DFG+S
Sbjct: 133 GLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCL---VGQGLVVKIGDFGMS------- 182
Query: 272 KFQDIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFW 316
+DI + YY + PE +L RK ESDVWS GV+ + I G++P++
Sbjct: 183 --RDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 239
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 101/239 (42%), Gaps = 35/239 (14%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQALAG 155
GK LG G FG AT G AV K+ KM+ A D K E+KI+ L
Sbjct: 35 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAV-KMLKSTAHADEKEALMSELKIMSHLGQ 93
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
HEN+V A V + E C G+LL+ + K + S LA +D +K+
Sbjct: 94 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPS---LAPGQDPEGLDKE 150
Query: 216 AA--VVVRQMLRVAAECHLHGL--------VHRDMKPENFLFKSAKEDSSLKATDFGL-- 263
+ +R +L +++ G+ +HRD+ N L + K DFGL
Sbjct: 151 DGRPLELRDLLHFSSQVA-QGMAFLASKNCIHRDVAARNVLLTNGH---VAKIGDFGLAR 206
Query: 264 -----SDFIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 315
S++I G + ++APE + +SDVWS G++ + I G P+
Sbjct: 207 DIMNDSNYIVKGNARLPV----KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 261
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 98/241 (40%), Gaps = 37/241 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+I K++G G+FG K + VA+K ++ E +R+ ++ G
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY------TEKQRRDFLGEASIMG 101
Query: 156 ---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
H N+++ V I E E G L D L K D+++T
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRK---------------HDAQFT 145
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PG 270
++R + G VHRD+ N L S + K +DFGLS ++ P
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPE 202
Query: 271 KKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKE 326
+ G + +PE + RK SDVWS G++ + ++ G RP+W+ + + K
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 262
Query: 327 V 327
V
Sbjct: 263 V 263
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 101/244 (41%), Gaps = 45/244 (18%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQFG ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 27 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 79
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
Y + +YI E E G L+D FL + T + Q
Sbjct: 80 YAVVTQEP-IYIITEYMENGSLVD---------------FLKTPSGIKLTINKLLDMAAQ 123
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQD 275
+ A +HRD++ N L + S K DFGL+ I + G KF
Sbjct: 124 IAEGMAFIEERNYIHRDLRAANIL---VSDTLSCKIADFGLARLIEDNEYTAREGAKF-- 178
Query: 276 IVGSAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN--- 330
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R
Sbjct: 179 ---PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 235
Query: 331 -KPD 333
+PD
Sbjct: 236 VRPD 239
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 98/241 (40%), Gaps = 37/241 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+I K++G G+FG K + VA+K ++ E +R+ ++ G
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY------TEKQRRDFLGEASIMG 101
Query: 156 ---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
H N+++ V I E E G L D L K D+++T
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRK---------------HDAQFT 145
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PG 270
++R + G VHRD+ N L S + K +DFGLS ++ P
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPE 202
Query: 271 KKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKE 326
+ G + +PE + RK SDVWS G++ + ++ G RP+W+ + + K
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 262
Query: 327 V 327
V
Sbjct: 263 V 263
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 98/241 (40%), Gaps = 37/241 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+I K++G G+FG K + VA+K ++ E +R+ ++ G
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY------TEKQRRDFLGEASIMG 101
Query: 156 ---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
H N+++ V I E E G L D L K D+++T
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRK---------------HDAQFT 145
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PG 270
++R + G VHRD+ N L S + K +DFGLS ++ P
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPE 202
Query: 271 KKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKE 326
+ G + +PE + RK SDVWS G++ + ++ G RP+W+ + + K
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 262
Query: 327 V 327
V
Sbjct: 263 V 263
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 98/241 (40%), Gaps = 37/241 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+I K++G G+FG K + VA+K ++ E +R+ ++ G
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY------TEKQRRDFLGEASIMG 101
Query: 156 ---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
H N+++ V I E E G L D L K D+++T
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRK---------------HDAQFT 145
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PG 270
++R + G VHRD+ N L S + K +DFGLS ++ P
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPE 202
Query: 271 KKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKE 326
+ G + +PE + RK SDVWS G++ + ++ G RP+W+ + + K
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 262
Query: 327 V 327
V
Sbjct: 263 V 263
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 98/241 (40%), Gaps = 37/241 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+I K++G G+FG K + VA+K ++ E +R+ ++ G
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY------TEKQRRDFLGEASIMG 101
Query: 156 ---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
H N+++ V I E E G L D L K D+++T
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRK---------------HDAQFT 145
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PG 270
++R + G VHRD+ N L S + K +DFGLS ++ P
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPE 202
Query: 271 KKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKE 326
+ G + +PE + RK SDVWS G++ + ++ G RP+W+ + + K
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 262
Query: 327 V 327
V
Sbjct: 263 V 263
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 98/241 (40%), Gaps = 37/241 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+I K++G G+FG K + VA+K ++ E +R+ ++ G
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY------TEKQRRDFLGEASIMG 101
Query: 156 ---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
H N+++ V I E E G L D L K D+++T
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRK---------------HDAQFT 145
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PG 270
++R + G VHRD+ N L S + K +DFGLS ++ P
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPE 202
Query: 271 KKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKE 326
+ G + +PE + RK SDVWS G++ + ++ G RP+W+ + + K
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 262
Query: 327 V 327
V
Sbjct: 263 V 263
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 98/241 (40%), Gaps = 37/241 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+I K++G G+FG K + VA+K ++ E +R+ ++ G
Sbjct: 46 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG------YTEKQRRDFLGEASIMG 99
Query: 156 ---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
H N+++ V I E E G L D L K D+++T
Sbjct: 100 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRK---------------HDAQFT 143
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PG 270
++R + G VHRD+ N L S + K +DFGLS ++ P
Sbjct: 144 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPE 200
Query: 271 KKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKE 326
+ G + +PE + RK SDVWS G++ + ++ G RP+W+ + + K
Sbjct: 201 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 260
Query: 327 V 327
V
Sbjct: 261 V 261
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 101/244 (41%), Gaps = 45/244 (18%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQFG ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 22 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 74
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
Y + +YI E E G L+D FL + T + Q
Sbjct: 75 YAVVTQEP-IYIITEYMENGSLVD---------------FLKTPSGIKLTINKLLDMAAQ 118
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQD 275
+ A +HRD++ N L + S K DFGL+ I + G KF
Sbjct: 119 IAEGMAFIEERNYIHRDLRAANIL---VSDTLSCKIADFGLARLIEDNEXTAREGAKF-- 173
Query: 276 IVGSAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN--- 330
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R
Sbjct: 174 ---PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 230
Query: 331 -KPD 333
+PD
Sbjct: 231 VRPD 234
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 101/244 (41%), Gaps = 45/244 (18%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQFG ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 23 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 75
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
Y + +YI E E G L+D FL + T + Q
Sbjct: 76 YAVVTQEP-IYIITEYMENGSLVD---------------FLKTPSGIKLTINKLLDMAAQ 119
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQD 275
+ A +HRD++ N L + S K DFGL+ I + G KF
Sbjct: 120 IAEGMAFIEERNYIHRDLRAANIL---VSDTLSCKIADFGLARLIEDNEXTAREGAKF-- 174
Query: 276 IVGSAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN--- 330
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R
Sbjct: 175 ---PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 231
Query: 331 -KPD 333
+PD
Sbjct: 232 VRPD 235
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 101/244 (41%), Gaps = 45/244 (18%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQFG ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 21 LGAGQFGEVWMGY--YNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 73
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
Y + +YI E E G L+D FL + T + Q
Sbjct: 74 YAVVTQEP-IYIITEYMENGSLVD---------------FLKTPSGIKLTINKLLDMAAQ 117
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQD 275
+ A +HRD++ N L + S K DFGL+ I + G KF
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANIL---VSDTLSCKIADFGLARLIEDNEXTAREGAKF-- 172
Query: 276 IVGSAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN--- 330
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R
Sbjct: 173 ---PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 229
Query: 331 -KPD 333
+PD
Sbjct: 230 VRPD 233
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 91/227 (40%), Gaps = 38/227 (16%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG GQFG ++ N +VAVK ++ M +V+ E +++ L H+ +V+
Sbjct: 18 KKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM----SVQAFLEEANLMKTLQ-HDKLVR 71
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
Y + +YI E G LLD FL + +
Sbjct: 72 LYAVVTKEEPIYIITEFMAKGSLLD---------------FLKSDEGGKVLLPKLIDFSA 116
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQ 274
Q+ A +HRD++ N L E K DFGL+ I + G KF
Sbjct: 117 QIAEGMAYIERKNYIHRDLRAANVL---VSESLMCKIADFGLARVIEDNEYTAREGAKF- 172
Query: 275 DIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITY-ILLCGRRPFWDKT 319
+ APE + +S+VWS G++ Y I+ G+ P+ +T
Sbjct: 173 ----PIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRT 215
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 101/244 (41%), Gaps = 45/244 (18%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQFG ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 26 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 78
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
Y + +YI E E G L+D FL + T + Q
Sbjct: 79 YAVVTQEP-IYIITEYMENGSLVD---------------FLKTPSGIKLTINKLLDMAAQ 122
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQD 275
+ A +HRD++ N L + S K DFGL+ I + G KF
Sbjct: 123 IAEGMAFIEERNYIHRDLRAANIL---VSDTLSCKIADFGLARLIEDNEYTAREGAKF-- 177
Query: 276 IVGSAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN--- 330
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R
Sbjct: 178 ---PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 234
Query: 331 -KPD 333
+PD
Sbjct: 235 VRPD 238
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 108/255 (42%), Gaps = 37/255 (14%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR------------EV 147
GK+LG G FG AT A G I K + + +AV+ +K E+
Sbjct: 49 FGKVLGSGAFGKVMNAT--AYG-------ISKTGVSIQVAVKMLKEKADSSEREALMSEL 99
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWF----- 202
K++ L HEN+V A +Y+ E C G+LL+ + +K + +
Sbjct: 100 KMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKR 159
Query: 203 LAIRKD-SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261
L +D + T +D Q+ + VHRD+ N L K +K DF
Sbjct: 160 LEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGK---VVKICDF 216
Query: 262 GLSDFIKPGKKFQDIVGSA----YYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPF 315
GL+ I + + G+A ++APE L + +SDVWS G++ + I G P+
Sbjct: 217 GLARDIMSDSNYV-VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275
Query: 316 WDKTEDGIFKEVLRN 330
D F ++++N
Sbjct: 276 PGIPVDANFYKLIQN 290
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 98/241 (40%), Gaps = 37/241 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+I K++G G+FG K + VA+K ++ E +R+ ++ G
Sbjct: 19 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY------TEKQRRDFLGEASIMG 72
Query: 156 ---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
H N+++ V I E E G L D L K D+++T
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRK---------------HDAQFT 116
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PG 270
++R + G VHRD+ N L S + K +DFGLS ++ P
Sbjct: 117 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPE 173
Query: 271 KKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKE 326
+ G + +PE + RK SDVWS G++ + ++ G RP+W+ + + K
Sbjct: 174 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 233
Query: 327 V 327
V
Sbjct: 234 V 234
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 101/244 (41%), Gaps = 45/244 (18%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQFG ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 21 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 73
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
Y + +YI E E G L+D FL + T + Q
Sbjct: 74 YAVVTQEP-IYIITEYMENGSLVD---------------FLKTPSGIKLTINKLLDMAAQ 117
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQD 275
+ A +HRD++ N L + S K DFGL+ I + G KF
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANIL---VSDTLSCKIADFGLARLIEDNEXTAREGAKF-- 172
Query: 276 IVGSAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN--- 330
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R
Sbjct: 173 ---PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 229
Query: 331 -KPD 333
+PD
Sbjct: 230 VRPD 233
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 98/241 (40%), Gaps = 37/241 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+I K++G G+FG K + VA+K ++ E +R+ ++ G
Sbjct: 19 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY------TEKQRRDFLGEASIMG 72
Query: 156 ---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
H N+++ V I E E G L D L K D+++T
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRK---------------HDAQFT 116
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PG 270
++R + G VHRD+ N L S + K +DFGLS ++ P
Sbjct: 117 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPE 173
Query: 271 KKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKE 326
+ G + +PE + RK SDVWS G++ + ++ G RP+W+ + + K
Sbjct: 174 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 233
Query: 327 V 327
V
Sbjct: 234 V 234
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 95/240 (39%), Gaps = 37/240 (15%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG- 155
I K++G G+FG K G R VA+K ++ + +R+ ++ G
Sbjct: 18 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAG------YTDKQRRDFLSEASIMGQ 71
Query: 156 --HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H N++ V I E E G L D L K D R+T
Sbjct: 72 FDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRK---------------NDGRFTV 115
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGK 271
++R + VHRD+ N L S + K +DFG+S ++ P
Sbjct: 116 IQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNS---NLVCKVSDFGMSRVLEDDPEA 172
Query: 272 KFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 327
+ G + APE + RK SDVWS G++ + ++ G RP+WD + + K +
Sbjct: 173 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 232
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 101/244 (41%), Gaps = 45/244 (18%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQFG ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 16 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 68
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
Y + +YI E E G L+D FL + T + Q
Sbjct: 69 YAVVTQEP-IYIITEYMENGSLVD---------------FLKTPSGIKLTINKLLDMAAQ 112
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQD 275
+ A +HRD++ N L + S K DFGL+ I + G KF
Sbjct: 113 IAEGMAFIEERNYIHRDLRAANIL---VSDTLSCKIADFGLARLIEDNEYTAREGAKF-- 167
Query: 276 IVGSAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN--- 330
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R
Sbjct: 168 ---PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 224
Query: 331 -KPD 333
+PD
Sbjct: 225 VRPD 228
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 112/282 (39%), Gaps = 40/282 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR---EVKILQALAGHENVV 160
LG G +G +G AVK+I + ++ KR ++ I V
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRAT-----VNSQEQKRLLXDLDISXRTVDCPFTV 96
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVV 220
FY A + V+I EL + LD+ ++I T I +D K A +V
Sbjct: 97 TFYGALFREGDVWICXELXDTS--LDKFYKQVIDKGQT------IPED--ILGKIAVSIV 146
Query: 221 RQMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+ + HLH ++HRD+KP N L + + +K DFG+S ++
Sbjct: 147 KALE------HLHSKLSVIHRDVKPSNVLINALGQ---VKXCDFGISGYLVDDVAKDIDA 197
Query: 278 GSAYYVAPEVL-----KRKSGPESDVWSIGVITYILLCGRRPF--WDKTEDGIFKEVLRN 330
G Y APE + ++ +SD+WS+G+ L R P+ W + + V
Sbjct: 198 GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEP 257
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
P P S DF + L K+ + R T + HP+
Sbjct: 258 SPQL---PADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPF 296
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 101/244 (41%), Gaps = 45/244 (18%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQFG ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 21 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 73
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
Y + +YI E E G L+D FL + T + Q
Sbjct: 74 YAVVTQEP-IYIITEYMENGSLVD---------------FLKTPSGIKLTINKLLDMAAQ 117
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQD 275
+ A +HRD++ N L + S K DFGL+ I + G KF
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANIL---VSDTLSCKIADFGLARLIEDNEYTAREGAKF-- 172
Query: 276 IVGSAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN--- 330
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R
Sbjct: 173 ---PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 229
Query: 331 -KPD 333
+PD
Sbjct: 230 VRPD 233
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 93/223 (41%), Gaps = 39/223 (17%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG GQFG ++AT + +VAVK ++ M +VE E +++ L H+ +VK
Sbjct: 194 KKLGAGQFGEVWMATYNKH-TKVAVKTMKPGSM----SVEAFLAEANVMKTLQ-HDKLVK 247
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+ + +YI E G LLD FL + S+
Sbjct: 248 LHAVVTKEP-IYIITEFMAKGSLLD---------------FLKSDEGSKQPLPKLIDFSA 291
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQ 274
Q+ A +HRD++ N L ++ K DFGL+ I + G KF
Sbjct: 292 QIAEGMAFIEQRNYIHRDLRAANILVSASL---VCKIADFGLARVIEDNEYTAREGAKF- 347
Query: 275 DIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITY-ILLCGRRPF 315
+ APE + S +SDVWS G++ I+ GR P+
Sbjct: 348 ----PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY 386
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 100/241 (41%), Gaps = 24/241 (9%)
Query: 93 DFDRR-YTIGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKMILPIAVEDVKRE 146
+F R+ +GK LG G+FG AT +A VAVK +++N P + D+ E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS--PSELRDLLSE 76
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD------RILAKMISTTLTSA 200
+L+ + H +V+K Y A D + + +E + G L ++ + + +
Sbjct: 77 FNVLKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 201 WFLAIRKDSR-YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259
D R T D Q+ + LVHRD+ N L E +K +
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNIL---VAEGRKMKIS 192
Query: 260 DFGLSDFI----KPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITY-ILLCGRRP 314
DFGLS + K+ Q + + + +SDVWS GV+ + I+ G P
Sbjct: 193 DFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
Query: 315 F 315
+
Sbjct: 253 Y 253
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 31/222 (13%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T K LG GQFG + D VA+K I++ M + ++ E K++ L+ HE
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM----SEDEFIEEAKVMMNLS-HEK 80
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ Y ++I E G LL+ + + + + L + KD
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKD---------- 128
Query: 219 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 278
V M + ++ LH RD+ N L + +K +DFGLS ++ ++ VG
Sbjct: 129 VCEAMEYLESKQFLH----RDLAARNCL---VNDQGVVKVSDFGLSRYVLDDEETSS-VG 180
Query: 279 SAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
S + + PEVL K +SD+W+ GV+ + I G+ P+
Sbjct: 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 95/240 (39%), Gaps = 37/240 (15%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG- 155
I K++G G+FG K G R VA+K ++ + +R+ ++ G
Sbjct: 12 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAG------YTDKQRRDFLSEASIMGQ 65
Query: 156 --HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H N++ V I E E G L D L K D R+T
Sbjct: 66 FDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRK---------------NDGRFTV 109
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGK 271
++R + VHRD+ N L S + K +DFG+S ++ P
Sbjct: 110 IQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNS---NLVCKVSDFGMSRVLEDDPEA 166
Query: 272 KFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 327
+ G + APE + RK SDVWS G++ + ++ G RP+WD + + K +
Sbjct: 167 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 226
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 95/240 (39%), Gaps = 37/240 (15%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG- 155
I K++G G+FG K G R VA+K ++ + +R+ ++ G
Sbjct: 33 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAG------YTDKQRRDFLSEASIMGQ 86
Query: 156 --HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H N++ V I E E G L D L K D R+T
Sbjct: 87 FDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRK---------------NDGRFTV 130
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGK 271
++R + VHRD+ N L S + K +DFG+S ++ P
Sbjct: 131 IQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNS---NLVCKVSDFGMSRVLEDDPEA 187
Query: 272 KFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 327
+ G + APE + RK SDVWS G++ + ++ G RP+WD + + K +
Sbjct: 188 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 247
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 93/223 (41%), Gaps = 39/223 (17%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG GQFG ++AT + +VAVK ++ M +VE E +++ L H+ +VK
Sbjct: 21 KKLGAGQFGEVWMATYNKH-TKVAVKTMKPGSM----SVEAFLAEANVMKTLQ-HDKLVK 74
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+ + +YI E G LLD FL + S+
Sbjct: 75 LHAVVTKEP-IYIITEFMAKGSLLD---------------FLKSDEGSKQPLPKLIDFSA 118
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQ 274
Q+ A +HRD++ N L ++ K DFGL+ I + G KF
Sbjct: 119 QIAEGMAFIEQRNYIHRDLRAANILVSAS---LVCKIADFGLARVIEDNEYTAREGAKF- 174
Query: 275 DIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITY-ILLCGRRPF 315
+ APE + S +SDVWS G++ I+ GR P+
Sbjct: 175 ----PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY 213
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 30/244 (12%)
Query: 93 DFDRR-YTIGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKMILPIAVEDVKRE 146
+F R+ +GK LG G+FG AT +A VAVK +++N P + D+ E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS--PSELRDLLSE 76
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD------RILAKMISTTLTSA 200
+L+ + H +V+K Y A D + + +E + G L ++ + + +
Sbjct: 77 FNVLKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 201 WFLAIRKDSR-YTEKDA---AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256
D R T D A + Q ++ AE LVHRD+ N L E +
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAARNIL---VAEGRKM 189
Query: 257 KATDFGLSDFI----KPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITY-ILLCG 311
K +DFGLS + K+ Q + + + +SDVWS GV+ + I+ G
Sbjct: 190 KISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249
Query: 312 RRPF 315
P+
Sbjct: 250 GNPY 253
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 124/287 (43%), Gaps = 47/287 (16%)
Query: 103 LLGHGQFGYTYVATDKANGDRV--AVKKIEKNKMILPIAVEDVKR----EVKILQALAGH 156
++G G FG A K +G R+ A+K++++ A +D R E+++L L H
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKE------YASKDDHRDFAGELEVLCKLGHH 82
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLD-----RIL--------AKMISTTLTSAWFL 203
N++ A E Y+Y+A+E G LLD R+L A ++TL+S L
Sbjct: 83 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 142
Query: 204 AIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263
AA V R M ++ + +HR++ N L E+ K DFGL
Sbjct: 143 HF----------AADVARGMDYLSQK----QFIHRNLAARNIL---VGENYVAKIADFGL 185
Query: 264 SDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITY-ILLCGRRPFWDKTED 321
S + K ++A E L SDVWS GV+ + I+ G P+ T
Sbjct: 186 SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA 245
Query: 322 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368
+++++ + +R + + + D +++ + P R + AQ L
Sbjct: 246 ELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 289
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 98/241 (40%), Gaps = 37/241 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+I K++G G+FG K + VA+K ++ E +R+ ++ G
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY------TEKQRRDFLGEASIMG 101
Query: 156 ---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
H N+++ V I E E G L D L K D+++T
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRK---------------HDAQFT 145
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PG 270
++R + G VHRD+ N L S + K +DFGL+ ++ P
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLARVLEDDPE 202
Query: 271 KKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKE 326
+ G + +PE + RK SDVWS G++ + ++ G RP+W+ + + K
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 262
Query: 327 V 327
V
Sbjct: 263 V 263
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 32/225 (14%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKI------EKNKMILPIAVEDVKREVKILQALAG 155
K +G G FG + + VA+K + + +MI ++ +REV I+ L
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE--KFQEFQREVFIMSNL-N 81
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
H N+VK Y N + ME G+L R+L K W + +R D
Sbjct: 82 HPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLLDKAHPIK----WSVKLR-----LMLD 130
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL--KATDFGLSDFIKPGKKF 273
A+ + M +VHRD++ N +S E++ + K DFG S +
Sbjct: 131 IALGIEYMQNQNPP-----IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSVHSV 183
Query: 274 QDIVGSAYYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPF 315
++G+ ++APE + + ++D +S +I Y +L G PF
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 30/244 (12%)
Query: 93 DFDRR-YTIGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKMILPIAVEDVKRE 146
+F R+ +GK LG G+FG AT +A VAVK +++N P + D+ E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS--PSELRDLLSE 76
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD------RILAKMISTTLTSA 200
+L+ + H +V+K Y A D + + +E + G L ++ + + +
Sbjct: 77 FNVLKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 201 WFLAIRKDSR-YTEKDA---AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256
D R T D A + Q ++ AE LVHRD+ N L E +
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAARNIL---VAEGRKM 189
Query: 257 KATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITY-ILLCG 311
K +DFGLS + K+ Q + + + +SDVWS GV+ + I+ G
Sbjct: 190 KISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249
Query: 312 RRPF 315
P+
Sbjct: 250 GNPY 253
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 32/225 (14%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKI------EKNKMILPIAVEDVKREVKILQALAG 155
K +G G FG + + VA+K + + +MI ++ +REV I+ L
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE--KFQEFQREVFIMSNL-N 81
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
H N+VK Y N + ME G+L R+L K W + +R D
Sbjct: 82 HPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLLDKAHPIK----WSVKLR-----LMLD 130
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL--KATDFGLSDFIKPGKKF 273
A+ + M +VHRD++ N +S E++ + K DF LS +
Sbjct: 131 IALGIEYMQNQNPP-----IVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSVHSV 183
Query: 274 QDIVGSAYYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPF 315
++G+ ++APE + + ++D +S +I Y +L G PF
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 43/243 (17%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQFG ++ + +VAVK +++ M + + E +++ L H+ +V+ Y
Sbjct: 17 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRLY 70
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ +YI E E G L+D FL + T + Q+
Sbjct: 71 AVVTQEP-IYIITEYMENGSLVD---------------FLKTPSGIKLTINKLLDMAAQI 114
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDI 276
A +HR+++ N L + S K DFGL+ I + G KF
Sbjct: 115 AEGMAFIEERNYIHRNLRAANIL---VSDTLSCKIADFGLARLIEDNEYTAREGAKF--- 168
Query: 277 VGSAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN---- 330
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R
Sbjct: 169 --PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 226
Query: 331 KPD 333
+PD
Sbjct: 227 RPD 229
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 99/236 (41%), Gaps = 33/236 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQA 152
R +GK LG G FG + D D+ A + KM+ A R E+KIL
Sbjct: 28 RLNLGKPLGRGAFGQV-IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 153 LAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAK---MISTTLTSAWFLAIRKD 208
+ H NVV A + + + +E C+ G L + +K + FL +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---- 264
Y+ + V + M +A+ +HRD+ N L E + +K DFGL+
Sbjct: 147 IXYSFQ----VAKGMEFLASR----KXIHRDLAARNILL---SEKNVVKIXDFGLARDIY 195
Query: 265 ---DFIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 315
D+++ G D ++APE + R +SDVWS GV+ + I G P+
Sbjct: 196 KDPDYVRKG----DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 92/243 (37%), Gaps = 37/243 (15%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQAL 153
R I K++G G G + G R VA+K ++ E +R+ ++
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY------TERQRRDFLSEASI 103
Query: 154 AG---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
G H N+++ I E E G L D L D +
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRT---------------HDGQ 147
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-- 268
+T ++R + G VHRD+ N L S + K +DFGLS ++
Sbjct: 148 FTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDS---NLVCKVSDFGLSRVLEDD 204
Query: 269 PGKKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIF 324
P + G + APE + R SDVWS GV+ + +L G RP+W+ T +
Sbjct: 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264
Query: 325 KEV 327
V
Sbjct: 265 SSV 267
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 31/222 (13%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T K LG GQFG + D VA+K I++ M + ++ E K++ L+ HE
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM----SEDEFIEEAKVMMNLS-HEK 65
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ Y ++I E G LL+ + + + + L + KD E +
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDV--CEAMEYL 121
Query: 219 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 278
+Q L HRD+ N L + +K +DFGLS ++ ++ G
Sbjct: 122 ESKQFL------------HRDLAARNCL---VNDQGVVKVSDFGLSRYVLD-DEYTSSRG 165
Query: 279 SAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
S + + PEVL K +SD+W+ GV+ + I G+ P+
Sbjct: 166 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 102/241 (42%), Gaps = 34/241 (14%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EV 147
+F R R +GK LG G FG + D D+ A + KM+ A R E+
Sbjct: 23 EFPRDRLNLGKPLGRGAFGQV-IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSEL 81
Query: 148 KILQALAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAK---MISTTLTSAWFL 203
KIL + H NVV A + + + +E C+ G L + +K + FL
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFL 141
Query: 204 AIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263
+ Y+ + V + M +A+ +HRD+ N L E + +K DFGL
Sbjct: 142 TLEHLICYSFQ----VAKGMEFLASR----KXIHRDLAARNILL---SEKNVVKICDFGL 190
Query: 264 S-------DFIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRP 314
+ D+++ G D ++APE + R +SDVWS GV+ + I G P
Sbjct: 191 ARDIYKDPDYVRKG----DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
Query: 315 F 315
+
Sbjct: 247 Y 247
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 102/255 (40%), Gaps = 42/255 (16%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEK--NKMILPIAVEDVKREVKILQALAGHENV 159
K+LG G FG Y G+ V + K N+ P A + E I+ ++ H ++
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM-DHPHL 79
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKM--ISTTLTSAWFLAIRKDSRYTEKDAA 217
V+ + + +L G LL+ + I + L W + I K Y E+
Sbjct: 80 VRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE--- 135
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
LVHRD+ N L KS + +K TDFGL+ ++ +K +
Sbjct: 136 ---------------RRLVHRDLAARNVLVKSP---NHVKITDFGLARLLEGDEKEYNAD 177
Query: 278 GSAY---YVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
G ++A E + RK +SDVWS GV + L+ F K DGI R PD
Sbjct: 178 GGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT----FGGKPYDGIPT---REIPD 230
Query: 334 F----RRKPWPSISN 344
R P P I
Sbjct: 231 LLEKGERLPQPPICT 245
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 38/219 (17%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG Y G+ VAVKK++ + + D +RE++IL++L H+N+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQ-HDNI 76
Query: 160 VKF----YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
VK+ Y+A + + + ME G L D + A A R D +
Sbjct: 77 VKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQAH------------AERIDHIKLLQY 122
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
+ + + M + + + +HRD+ N L ++ ++ +K DFGL+ + K+
Sbjct: 123 TSQICKGMEYLGTKRY----IHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEXXK 175
Query: 276 IV----GSAYYVAPEVL-KRKSGPESDVWSIGVITYILL 309
+ ++ APE L + K SDVWS GV+ Y L
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 102/255 (40%), Gaps = 42/255 (16%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEK--NKMILPIAVEDVKREVKILQALAGHENV 159
K+LG G FG Y G+ V + K N+ P A + E I+ ++ H ++
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM-DHPHL 102
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKM--ISTTLTSAWFLAIRKDSRYTEKDAA 217
V+ + + +L G LL+ + I + L W + I K Y E+
Sbjct: 103 VRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE--- 158
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
LVHRD+ N L KS + +K TDFGL+ ++ +K +
Sbjct: 159 ---------------RRLVHRDLAARNVLVKSP---NHVKITDFGLARLLEGDEKEYNAD 200
Query: 278 GSAY---YVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
G ++A E + RK +SDVWS GV + L+ F K DGI R PD
Sbjct: 201 GGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT----FGGKPYDGIPT---REIPD 253
Query: 334 F----RRKPWPSISN 344
R P P I
Sbjct: 254 LLEKGERLPQPPICT 268
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 100/244 (40%), Gaps = 45/244 (18%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQ G ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 21 LGAGQAGEVWMGY--YNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 73
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
Y + +YI E E G L+D FL + T + Q
Sbjct: 74 YAVVTQEP-IYIITEYMENGSLVD---------------FLKTPSGIKLTINKLLDMAAQ 117
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQD 275
+ A +HRD++ N L + S K DFGL+ I + G KF
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANIL---VSDTLSCKIADFGLARLIEDAEXTAREGAKF-- 172
Query: 276 IVGSAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN--- 330
+ APE + + +SDVWS G+ +T I+ GR P+ T + + + R
Sbjct: 173 ---PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 229
Query: 331 -KPD 333
+PD
Sbjct: 230 VRPD 233
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 50.4 bits (119), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 425 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLE-ILQAIDCNTDGLVDFSEFVAATL 483
F +D + +GS+S EE++ ++ P +K ++L+ I +AID + +G +D +EF T
Sbjct: 6 FKQLDANGDGSVSYEEVKAFVSSKRP--IKNEQLLQLIFKAIDIDGNGEIDLAEF---TK 60
Query: 484 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGSIDPLLEEADID 540
++E D + + ++ D D DG +T EE+ G + +D ++ +AD +
Sbjct: 61 FAAAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQIM-KADAN 119
Query: 541 KDGRISLSEF 550
DG I+L EF
Sbjct: 120 GDGYITLEEF 129
Score = 30.4 bits (67), Expect = 2.8, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Query: 396 VKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKE 455
+ + +FA L DE++ L+ + +D D +G ++ EE+ K
Sbjct: 53 IDLAEFTKFAAAVKEQDLSDEKVG-LKILYKLMDADGDGKLTKEEVTTFFKK-----FGY 106
Query: 456 SRVLEILQAIDCNTDGLVDFSEFVAATL 483
+V++ + D N DG + EF+A L
Sbjct: 107 EKVVDQIMKADANGDGYITLEEFLAFNL 134
Score = 30.0 bits (66), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 500 SQAAFEKFDIDRDGFITPEELRMHTGLKGSIDP------LLEEADIDKDGRISLSEFRRL 553
++A F++ D + DG ++ EE++ K I + + DID +G I L+EF +
Sbjct: 2 AEALFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKF 61
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 103/250 (41%), Gaps = 34/250 (13%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ +GK +G G FG + + + VA+K +E K P + E + + L+ E
Sbjct: 6 FRVGKKIGCGNFGELRLGKNLYTNEYVAIK-LEPIKSRAP----QLHLEYRFYKQLSATE 60
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
V + Y Y + +EL + +L + L D +T K
Sbjct: 61 GVPQVYYFGPXGKYNAMVLEL--------------LGPSLEDLFDLC---DRTFTLKTVL 103
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDSSLKATDFGLS-DFIKPGKK-- 272
++ Q++ H L++RD+KPENFL K ++ DFGL+ ++I P K
Sbjct: 104 MIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKH 163
Query: 273 -----FQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
+ + G+A Y++ L ++ D+ ++G + L G P W + KE
Sbjct: 164 IPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLP-WQGLKADTLKE 222
Query: 327 VLRNKPDFRR 336
+ D +R
Sbjct: 223 RYQKIGDTKR 232
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 99/241 (41%), Gaps = 30/241 (12%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EV 147
+F R R +GK LG G FG + D D+ A + KM+ A R E+
Sbjct: 23 EFPRDRLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 81
Query: 148 KILQALAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
KIL + H NVV A + + + +E C+ G L + +K +
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 141
Query: 207 KDSRYTEKDAAV---VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263
KD E V + M +A+ +HRD+ N L E + +K DFGL
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFLASR----KCIHRDLAARNILLS---EKNVVKICDFGL 194
Query: 264 S-------DFIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRP 314
+ D+++ G D ++APE + R +SDVWS GV+ + I G P
Sbjct: 195 ARDIYKDPDYVRKG----DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
Query: 315 F 315
+
Sbjct: 251 Y 251
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 38/219 (17%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG Y G+ VAVKK++ + + D +RE++IL++L H+N+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQ-HDNI 73
Query: 160 VKF----YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
VK+ Y+A + + + ME G L D +L K+ R
Sbjct: 74 VKYKGVCYSAGRRN--LKLIMEYLPYGSLRD---------------YLQKHKE-RIDHIK 115
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
Q+ + +HRD+ N L + ++ +K DFGL+ + K+F
Sbjct: 116 LLQYTSQICKGMEYLGTKRYIHRDLATRNIL---VENENRVKIGDFGLTKVLPQDKEFFK 172
Query: 276 IV----GSAYYVAPEVL-KRKSGPESDVWSIGVITYILL 309
+ ++ APE L + K SDVWS GV+ Y L
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 91/243 (37%), Gaps = 37/243 (15%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQAL 153
R I K++G G G + G R VA+K ++ E +R+ ++
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY------TERQRRDFLSEASI 103
Query: 154 AG---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
G H N+++ I E E G L D L D +
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRT---------------HDGQ 147
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-- 268
+T ++R + G VHRD+ N L S + K +DFGLS ++
Sbjct: 148 FTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDS---NLVCKVSDFGLSRVLEDD 204
Query: 269 PGKKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIF 324
P G + APE + R SDVWS GV+ + +L G RP+W+ T +
Sbjct: 205 PDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264
Query: 325 KEV 327
V
Sbjct: 265 SSV 267
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 418 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 477
+ +LRD F D + +G IS E+R+A+ K L ++ + EI++ +D N DG VDF E
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 478 FV 479
FV
Sbjct: 66 FV 67
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 503 AFEKFDIDRDGFITPEELR-------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 554
AF +FD + DG I+ ELR H I+ ++ + D++ DGR+ EF R++
Sbjct: 12 AFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 70
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 33/225 (14%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
I + +G G FG + A + +G VAVK + + V + REV I++ L H N
Sbjct: 40 NIKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAE-RVNEFLREVAIMKRLR-HPN 95
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V F A + I E G L R+L K + + D R A
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGARE---------QLDERRRLSMAYD 145
Query: 219 VVRQMLRVAAECHLHG----LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF- 273
V + M +LH +VHRD+K N L + ++K DFGLS F
Sbjct: 146 VAKGM------NYLHNRNPPIVHRDLKSPNLL---VDKKYTVKVCDFGLSRL--KASXFL 194
Query: 274 --QDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPF 315
+ G+ ++APEVL+ S +SDV+S GVI + L ++P+
Sbjct: 195 XSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 101/246 (41%), Gaps = 40/246 (16%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EV 147
+F R R +GK LG G FG + D D+ A + KM+ A R E+
Sbjct: 25 EFPRDRLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 83
Query: 148 KILQALAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKMISTTLTSA--WFLA 204
KIL + H NVV A + + + +E C+ G L ST L S F+
Sbjct: 84 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL---------STYLRSKRNEFVP 134
Query: 205 IRKDSRYTEKDAAVV---VRQMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKA 258
++ KD + + +VA +HRD+ N L E + +K
Sbjct: 135 YKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKI 191
Query: 259 TDFGLS-------DFIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILL 309
DFGL+ D+++ G D ++APE + R +SDVWS GV+ + I
Sbjct: 192 CDFGLARDIYKDPDYVRKG----DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
Query: 310 CGRRPF 315
G P+
Sbjct: 248 LGASPY 253
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 101/242 (41%), Gaps = 32/242 (13%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EV 147
+F R R +GK LG G FG + D D+ A + KM+ A R E+
Sbjct: 60 EFPRDRLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 118
Query: 148 KILQALAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
KIL + H NVV A + + + +E C+ G L + +K +
Sbjct: 119 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 178
Query: 207 KDSRYTEKDAAV---VVRQMLRVAA-ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 262
KD E V + M +A+ +C +HRD+ N L E + +K DFG
Sbjct: 179 KDFLTLEHLICYSFQVAKGMEFLASRKC-----IHRDLAARNILLS---EKNVVKICDFG 230
Query: 263 LS-------DFIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRR 313
L+ D+++ G D ++APE + R +SDVWS GV+ + I G
Sbjct: 231 LARDIYKDPDYVRKG----DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 286
Query: 314 PF 315
P+
Sbjct: 287 PY 288
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 49.7 bits (117), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 407 RALASTLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAI 465
+A L +E+ + + FD + ++GSIS +E+ + + + L + E++ +
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVM-RMLGQNPTPEELQEMIDEV 64
Query: 466 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 525
D + G VDF EF+ + V +++ K F FD + DG+I EEL++
Sbjct: 65 DEDGSGTVDFDEFL--VMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQ 122
Query: 526 LKGS------IDPLLEEADIDKDGRISLSEFRRLLR 555
G I+ L+++ D + DGRI EF ++
Sbjct: 123 ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 98/241 (40%), Gaps = 30/241 (12%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EV 147
+F R R +GK LG G FG + D D+ A + KM+ A R E+
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 72
Query: 148 KILQALAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
KIL + H NVV A + + + E C+ G L + +K +
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 207 KDSRYTEKDAAV---VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263
KD E V + M +A+ +HRD+ N L E + +K DFGL
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASR----KCIHRDLAARNILLS---EKNVVKICDFGL 185
Query: 264 S-------DFIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRP 314
+ D+++ G D ++APE + R +SDVWS GV+ + I G P
Sbjct: 186 ARDIYKDPDYVRKG----DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
Query: 315 F 315
+
Sbjct: 242 Y 242
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 100/242 (41%), Gaps = 32/242 (13%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EV 147
+F R R +GK LG G FG + D D+ A + KM+ A R E+
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 72
Query: 148 KILQALAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
KIL + H NVV A + + + E C+ G L + +K +
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 207 KDSRYTEKDAAV---VVRQMLRVAA-ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 262
KD E V + M +A+ +C +HRD+ N L E + +K DFG
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKC-----IHRDLAARNILLS---EKNVVKICDFG 184
Query: 263 LS-------DFIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRR 313
L+ D+++ G D ++APE + R +SDVWS GV+ + I G
Sbjct: 185 LARDIYKDPDYVRKG----DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 240
Query: 314 PF 315
P+
Sbjct: 241 PY 242
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 49.7 bits (117), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 407 RALASTLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAI 465
+A L +E+ + + FD + ++GSIS +E+ + + + L + E++ +
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVM-RMLGQNPTPEELQEMIDEV 64
Query: 466 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 525
D + G VDF EF+ + V +++ K F FD + DG+I EEL++
Sbjct: 65 DEDGSGTVDFDEFL--VMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQ 122
Query: 526 LKGS------IDPLLEEADIDKDGRISLSEFRRLLR 555
G I+ L+++ D + DGRI EF ++
Sbjct: 123 ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,708,324
Number of Sequences: 62578
Number of extensions: 691184
Number of successful extensions: 6764
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 558
Number of HSP's that attempted gapping in prelim test: 2677
Number of HSP's gapped (non-prelim): 1795
length of query: 577
length of database: 14,973,337
effective HSP length: 104
effective length of query: 473
effective length of database: 8,465,225
effective search space: 4004051425
effective search space used: 4004051425
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)