Query 008127
Match_columns 577
No_of_seqs 538 out of 3625
Neff 9.4
Searched_HMMs 46136
Date Thu Mar 28 19:48:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008127.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008127hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0615 Serine/threonine prote 100.0 3.4E-63 7.5E-68 477.5 18.8 273 88-378 164-445 (475)
2 KOG0575 Polo-like serine/threo 100.0 6E-58 1.3E-62 463.1 25.9 258 96-378 18-277 (592)
3 KOG0033 Ca2+/calmodulin-depend 100.0 1.2E-59 2.5E-64 423.4 10.4 298 93-410 8-307 (355)
4 KOG0598 Ribosomal protein S6 k 100.0 4E-57 8.7E-62 433.1 23.3 257 96-376 25-287 (357)
5 KOG0032 Ca2+/calmodulin-depend 100.0 1.9E-55 4.2E-60 447.0 31.8 323 90-433 29-353 (382)
6 KOG0616 cAMP-dependent protein 100.0 1E-55 2.2E-60 409.0 20.4 254 96-376 44-303 (355)
7 KOG0581 Mitogen-activated prot 100.0 3.3E-55 7.1E-60 420.0 23.3 256 97-378 80-343 (364)
8 KOG0592 3-phosphoinositide-dep 100.0 1.7E-55 3.7E-60 437.9 21.9 258 96-377 73-345 (604)
9 KOG0605 NDR and related serine 100.0 4.6E-55 9.9E-60 435.4 23.0 260 96-377 141-452 (550)
10 KOG0595 Serine/threonine-prote 100.0 2.4E-54 5.2E-59 417.2 23.5 262 96-377 10-275 (429)
11 KOG0588 Serine/threonine prote 100.0 3.4E-54 7.4E-59 437.0 22.9 257 97-378 13-271 (786)
12 KOG0593 Predicted protein kina 100.0 9.3E-55 2E-59 403.3 15.7 258 96-375 2-289 (396)
13 KOG0583 Serine/threonine prote 100.0 5.9E-53 1.3E-57 429.3 27.5 259 94-376 15-281 (370)
14 KOG0599 Phosphorylase kinase g 100.0 1.1E-54 2.4E-59 396.8 12.5 266 92-377 13-290 (411)
15 KOG0661 MAPK related serine/th 100.0 7.6E-54 1.7E-58 419.8 14.4 263 93-377 7-298 (538)
16 KOG0694 Serine/threonine prote 100.0 1.1E-51 2.4E-56 422.2 22.8 257 96-377 368-631 (694)
17 KOG0600 Cdc2-related protein k 100.0 1.6E-51 3.5E-56 406.3 21.9 262 94-377 115-407 (560)
18 KOG0610 Putative serine/threon 100.0 1.6E-51 3.6E-56 397.5 21.4 261 96-377 77-399 (459)
19 KOG0659 Cdk activating kinase 100.0 3.3E-51 7.1E-56 373.7 20.6 260 96-377 2-288 (318)
20 KOG0585 Ca2+/calmodulin-depend 100.0 3E-51 6.6E-56 400.9 20.0 261 94-378 95-380 (576)
21 KOG0591 NIMA (never in mitosis 100.0 1.5E-52 3.3E-57 384.8 9.7 256 96-376 19-282 (375)
22 KOG0580 Serine/threonine prote 100.0 1.3E-51 2.7E-56 371.2 13.1 257 96-376 22-279 (281)
23 KOG0597 Serine-threonine prote 100.0 2.6E-51 5.7E-56 408.0 16.1 255 96-377 2-258 (808)
24 KOG0663 Protein kinase PITSLRE 100.0 3.2E-50 7E-55 377.9 20.2 260 96-377 76-368 (419)
25 KOG0582 Ste20-like serine/thre 100.0 1.1E-49 2.4E-54 387.7 23.9 264 96-380 26-303 (516)
26 KOG0578 p21-activated serine/t 100.0 3.2E-50 6.9E-55 403.9 19.9 260 92-378 269-531 (550)
27 KOG0611 Predicted serine/threo 100.0 1.3E-50 2.9E-55 388.2 16.4 256 94-375 51-308 (668)
28 KOG0660 Mitogen-activated prot 100.0 5.4E-50 1.2E-54 382.5 20.4 268 93-383 19-323 (359)
29 KOG0198 MEKK and related serin 100.0 4.9E-50 1.1E-54 391.7 20.0 258 97-378 18-284 (313)
30 KOG4717 Serine/threonine prote 100.0 2.9E-49 6.3E-54 388.9 19.2 266 90-379 12-279 (864)
31 cd05631 STKc_GRK4 Catalytic do 100.0 5.6E-48 1.2E-52 385.8 26.6 260 98-376 2-267 (285)
32 KOG0604 MAP kinase-activated p 100.0 2.5E-49 5.4E-54 366.5 15.5 267 94-383 59-335 (400)
33 PTZ00263 protein kinase A cata 100.0 4.1E-48 9E-53 394.6 25.8 254 96-376 18-277 (329)
34 cd05612 STKc_PRKX_like Catalyt 100.0 3.1E-48 6.7E-53 388.8 23.9 253 97-376 2-260 (291)
35 cd05628 STKc_NDR1 Catalytic do 100.0 8.7E-48 1.9E-52 397.7 27.7 259 96-376 1-299 (363)
36 cd05571 STKc_PKB Catalytic dom 100.0 6.6E-48 1.4E-52 392.2 25.1 250 102-376 1-257 (323)
37 KOG0667 Dual-specificity tyros 100.0 5.3E-48 1.1E-52 395.4 24.0 263 92-377 182-509 (586)
38 KOG0658 Glycogen synthase kina 100.0 2.1E-48 4.6E-53 372.2 18.7 260 96-379 24-315 (364)
39 cd05599 STKc_NDR_like Catalyti 100.0 1.3E-47 2.9E-52 396.8 26.3 258 97-376 2-302 (364)
40 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.3E-47 5E-52 390.1 26.4 257 97-376 2-263 (333)
41 PTZ00426 cAMP-dependent protei 100.0 2.1E-47 4.4E-52 390.5 25.2 254 96-376 30-290 (340)
42 cd05626 STKc_LATS2 Catalytic d 100.0 4.5E-47 9.7E-52 394.9 28.2 259 97-376 2-311 (381)
43 KOG0192 Tyrosine kinase specif 100.0 2.7E-47 5.8E-52 384.1 25.4 248 98-369 43-298 (362)
44 cd05596 STKc_ROCK Catalytic do 100.0 2.9E-47 6.3E-52 394.2 26.2 259 96-376 43-310 (370)
45 cd05625 STKc_LATS1 Catalytic d 100.0 3.4E-47 7.4E-52 396.2 26.8 258 97-376 2-311 (382)
46 KOG0594 Protein kinase PCTAIRE 100.0 2.1E-47 4.6E-52 366.2 22.6 264 96-378 11-310 (323)
47 KOG0201 Serine/threonine prote 100.0 2.5E-49 5.4E-54 385.2 9.2 256 96-377 13-270 (467)
48 cd05585 STKc_YPK1_like Catalyt 100.0 4.2E-47 9.2E-52 384.4 25.9 248 104-376 1-253 (312)
49 cd05629 STKc_NDR_like_fungal C 100.0 3.4E-47 7.4E-52 395.5 25.8 258 97-376 2-311 (377)
50 cd05621 STKc_ROCK2 Catalytic d 100.0 5.5E-47 1.2E-51 391.7 26.3 259 96-376 43-310 (370)
51 cd05598 STKc_LATS Catalytic do 100.0 3.6E-47 7.9E-52 395.2 24.7 258 97-376 2-307 (376)
52 cd05593 STKc_PKB_gamma Catalyt 100.0 8.9E-47 1.9E-51 384.5 25.9 250 102-376 1-257 (328)
53 cd05590 STKc_nPKC_eta Catalyti 100.0 7E-47 1.5E-51 384.1 24.9 251 102-376 1-259 (320)
54 cd05573 STKc_ROCK_NDR_like Cat 100.0 5.1E-47 1.1E-51 390.4 24.0 258 97-376 2-291 (350)
55 cd05587 STKc_cPKC Catalytic do 100.0 1.6E-46 3.4E-51 382.3 27.0 256 97-376 1-263 (324)
56 KOG0197 Tyrosine kinases [Sign 100.0 1.8E-47 4E-52 383.5 19.1 244 97-368 207-455 (468)
57 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.4E-46 3.1E-51 376.2 25.4 255 96-373 5-288 (288)
58 cd05595 STKc_PKB_beta Catalyti 100.0 1.3E-46 2.9E-51 382.5 25.3 250 102-376 1-257 (323)
59 cd05601 STKc_CRIK Catalytic do 100.0 9.7E-47 2.1E-51 385.0 23.8 259 97-376 2-269 (330)
60 cd05627 STKc_NDR2 Catalytic do 100.0 1.4E-46 3E-51 388.4 24.9 258 97-376 2-299 (360)
61 cd05616 STKc_cPKC_beta Catalyt 100.0 3E-46 6.4E-51 380.2 26.9 256 97-376 1-263 (323)
62 cd05591 STKc_nPKC_epsilon Cata 100.0 2.3E-46 5.1E-51 380.6 25.5 251 102-376 1-260 (321)
63 cd05622 STKc_ROCK1 Catalytic d 100.0 3.5E-46 7.6E-51 386.0 26.4 259 96-376 43-310 (371)
64 cd05588 STKc_aPKC Catalytic do 100.0 3.9E-46 8.5E-51 380.1 26.1 250 102-375 1-267 (329)
65 cd05589 STKc_PKN Catalytic dom 100.0 4.5E-46 9.7E-51 379.0 26.4 254 98-376 1-263 (324)
66 cd05605 STKc_GRK4_like Catalyt 100.0 6.4E-46 1.4E-50 371.0 26.5 261 97-376 1-267 (285)
67 cd05592 STKc_nPKC_theta_delta 100.0 5E-46 1.1E-50 377.1 25.8 251 102-376 1-254 (316)
68 KOG0612 Rho-associated, coiled 100.0 6.3E-48 1.4E-52 411.4 12.0 259 96-376 75-344 (1317)
69 KOG0607 MAP kinase-interacting 100.0 3.2E-47 6.9E-52 355.1 15.2 267 93-379 74-370 (463)
70 cd05594 STKc_PKB_alpha Catalyt 100.0 2.5E-46 5.5E-51 381.0 23.3 250 102-376 1-258 (325)
71 cd05620 STKc_nPKC_delta Cataly 100.0 4.9E-46 1.1E-50 377.2 25.3 251 102-376 1-254 (316)
72 cd07869 STKc_PFTAIRE1 Catalyti 100.0 6.7E-46 1.5E-50 374.2 26.1 259 96-377 5-295 (303)
73 cd05615 STKc_cPKC_alpha Cataly 100.0 1.2E-45 2.6E-50 375.5 26.7 256 97-376 1-263 (323)
74 cd05570 STKc_PKC Catalytic dom 100.0 7E-46 1.5E-50 376.5 24.9 251 102-376 1-258 (318)
75 PTZ00036 glycogen synthase kin 100.0 5.9E-46 1.3E-50 392.2 25.1 260 95-378 65-359 (440)
76 KOG0589 Serine/threonine prote 100.0 1E-46 2.2E-51 377.2 18.1 258 96-376 4-264 (426)
77 cd05614 STKc_MSK2_N N-terminal 100.0 6.9E-46 1.5E-50 379.1 24.7 256 97-376 1-273 (332)
78 cd05618 STKc_aPKC_iota Catalyt 100.0 1.1E-45 2.4E-50 376.7 26.0 251 102-376 1-268 (329)
79 cd05619 STKc_nPKC_theta Cataly 100.0 1E-45 2.2E-50 374.7 25.5 252 102-377 1-255 (316)
80 cd07848 STKc_CDKL5 Catalytic d 100.0 1E-45 2.2E-50 369.9 25.0 255 97-373 2-287 (287)
81 cd07862 STKc_CDK6 Catalytic do 100.0 1.7E-45 3.7E-50 368.9 26.5 257 97-373 2-290 (290)
82 KOG0690 Serine/threonine prote 100.0 2.8E-47 6.1E-52 356.1 12.5 257 95-376 167-430 (516)
83 cd05575 STKc_SGK Catalytic dom 100.0 1.1E-45 2.4E-50 375.9 24.4 250 102-376 1-257 (323)
84 cd05597 STKc_DMPK_like Catalyt 100.0 3.4E-45 7.5E-50 373.4 27.7 261 96-376 1-272 (331)
85 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.1E-45 4.6E-50 376.5 26.2 259 97-378 1-298 (338)
86 cd05584 STKc_p70S6K Catalytic 100.0 2.7E-45 5.9E-50 373.0 25.7 250 102-376 2-262 (323)
87 cd05608 STKc_GRK1 Catalytic do 100.0 3.2E-45 7E-50 364.9 25.5 252 104-376 1-263 (280)
88 cd05586 STKc_Sck1_like Catalyt 100.0 9.3E-46 2E-50 377.7 21.8 250 104-376 1-259 (330)
89 cd05617 STKc_aPKC_zeta Catalyt 100.0 4.9E-45 1.1E-49 371.7 26.3 251 102-376 1-266 (327)
90 cd05623 STKc_MRCK_alpha Cataly 100.0 8.9E-45 1.9E-49 370.7 27.4 260 97-376 2-272 (332)
91 cd05630 STKc_GRK6 Catalytic do 100.0 1E-44 2.2E-49 362.3 26.7 258 97-376 1-267 (285)
92 KOG0577 Serine/threonine prote 100.0 2.5E-46 5.3E-51 373.7 14.8 263 90-378 20-286 (948)
93 cd05604 STKc_SGK3 Catalytic do 100.0 3.2E-45 7E-50 372.9 23.4 250 102-376 1-257 (325)
94 PHA03212 serine/threonine kina 100.0 7.9E-45 1.7E-49 377.7 26.4 251 96-377 92-383 (391)
95 cd05624 STKc_MRCK_beta Catalyt 100.0 1.1E-44 2.4E-49 369.7 26.8 261 96-376 1-272 (331)
96 KOG4236 Serine/threonine prote 100.0 2.8E-46 6E-51 368.8 14.3 264 94-377 560-826 (888)
97 cd06649 PKc_MEK2 Catalytic dom 100.0 1.9E-44 4E-49 368.2 28.1 258 96-377 5-308 (331)
98 cd07863 STKc_CDK4 Catalytic do 100.0 1.4E-44 3E-49 361.9 26.4 257 97-373 1-288 (288)
99 cd05602 STKc_SGK1 Catalytic do 100.0 7.8E-45 1.7E-49 370.1 24.6 250 102-376 1-257 (325)
100 PLN00034 mitogen-activated pro 100.0 7.3E-45 1.6E-49 374.5 24.1 256 96-378 74-336 (353)
101 KOG0586 Serine/threonine prote 100.0 1.4E-45 3.1E-50 373.6 18.3 255 96-376 56-312 (596)
102 cd05632 STKc_GRK5 Catalytic do 100.0 3.6E-44 7.7E-49 358.3 27.7 260 98-376 2-267 (285)
103 KOG0579 Ste20-like serine/thre 100.0 1.6E-46 3.5E-51 377.2 10.7 259 96-378 32-297 (1187)
104 cd05603 STKc_SGK2 Catalytic do 100.0 1.2E-44 2.6E-49 368.1 24.5 250 102-376 1-257 (321)
105 cd05582 STKc_RSK_N N-terminal 100.0 7.1E-45 1.5E-49 369.3 22.2 249 102-376 2-260 (318)
106 PTZ00284 protein kinase; Provi 100.0 4.6E-44 9.9E-49 381.9 28.7 260 95-378 128-446 (467)
107 cd05607 STKc_GRK7 Catalytic do 100.0 3.1E-44 6.7E-49 357.2 25.5 251 104-376 1-260 (277)
108 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.2E-44 4.7E-49 364.3 24.6 260 96-378 6-294 (309)
109 PTZ00266 NIMA-related protein 100.0 6E-44 1.3E-48 392.6 29.1 270 91-378 8-303 (1021)
110 PTZ00267 NIMA-related protein 100.0 6.9E-44 1.5E-48 380.7 28.5 258 96-376 67-329 (478)
111 cd07876 STKc_JNK2 Catalytic do 100.0 3.8E-44 8.1E-49 370.2 25.6 259 94-377 19-322 (359)
112 PTZ00283 serine/threonine prot 100.0 9.8E-44 2.1E-48 379.7 28.8 263 93-376 29-303 (496)
113 KOG0574 STE20-like serine/thre 100.0 6.6E-47 1.4E-51 350.1 3.8 262 91-378 28-291 (502)
114 KOG0983 Mitogen-activated prot 100.0 1.3E-44 2.8E-49 331.1 18.2 261 97-380 93-359 (391)
115 KOG0986 G protein-coupled rece 100.0 3.1E-45 6.7E-50 356.5 13.7 258 96-376 185-452 (591)
116 cd06650 PKc_MEK1 Catalytic dom 100.0 1.8E-43 3.9E-48 361.0 26.6 256 96-377 5-306 (333)
117 cd07875 STKc_JNK1 Catalytic do 100.0 2.9E-43 6.3E-48 364.3 27.9 258 94-376 22-324 (364)
118 PF00069 Pkinase: Protein kina 100.0 3.8E-44 8.3E-49 352.7 20.2 254 98-373 1-260 (260)
119 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.1E-43 4.6E-48 355.6 26.1 259 96-377 6-293 (301)
120 cd07853 STKc_NLK Catalytic dom 100.0 1E-43 2.3E-48 368.6 24.2 257 97-376 1-294 (372)
121 cd07874 STKc_JNK3 Catalytic do 100.0 2E-43 4.4E-48 364.3 25.8 258 94-376 15-317 (355)
122 cd07878 STKc_p38beta_MAPK11 Ca 100.0 8.6E-44 1.9E-48 365.3 22.4 259 94-378 13-306 (343)
123 cd05580 STKc_PKA Catalytic dom 100.0 6.3E-43 1.4E-47 350.3 27.8 253 97-376 2-260 (290)
124 KOG0596 Dual specificity; seri 100.0 4.6E-44 1E-48 356.3 18.7 258 95-376 360-633 (677)
125 cd07868 STKc_CDK8 Catalytic do 100.0 2.3E-43 5.1E-48 358.1 24.0 258 101-373 6-317 (317)
126 cd06637 STKc_TNIK Catalytic do 100.0 5.7E-43 1.2E-47 347.1 25.8 256 94-373 4-272 (272)
127 cd06625 STKc_MEKK3_like Cataly 100.0 1.2E-42 2.6E-47 342.9 27.4 255 96-373 2-263 (263)
128 cd05102 PTKc_VEGFR3 Catalytic 100.0 5.1E-43 1.1E-47 358.8 25.4 267 96-369 7-329 (338)
129 KOG1989 ARK protein kinase fam 100.0 1.4E-43 3.1E-48 374.1 21.3 248 97-371 38-308 (738)
130 cd05574 STKc_phototropin_like 100.0 1.5E-42 3.2E-47 352.0 27.1 259 97-376 2-295 (316)
131 KOG0671 LAMMER dual specificit 100.0 2.5E-44 5.4E-49 344.6 12.9 266 89-376 82-412 (415)
132 PHA03209 serine/threonine kina 100.0 5E-43 1.1E-47 361.1 23.4 250 96-375 66-356 (357)
133 cd07861 STKc_CDK1_euk Catalyti 100.0 1.7E-42 3.6E-47 346.2 25.6 257 97-373 1-285 (285)
134 PHA03207 serine/threonine kina 100.0 1.1E-42 2.5E-47 362.9 25.1 253 94-376 90-381 (392)
135 KOG4279 Serine/threonine prote 100.0 7.2E-44 1.6E-48 361.6 14.8 253 103-379 582-841 (1226)
136 cd08223 STKc_Nek4 Catalytic do 100.0 6.5E-42 1.4E-46 336.4 28.3 254 97-373 1-257 (257)
137 cd05609 STKc_MAST Catalytic do 100.0 6.2E-42 1.3E-46 345.7 28.5 258 97-376 2-279 (305)
138 cd06654 STKc_PAK1 Catalytic do 100.0 6.6E-42 1.4E-46 343.8 28.4 258 95-378 19-278 (296)
139 cd06615 PKc_MEK Catalytic doma 100.0 5.1E-42 1.1E-46 346.7 27.8 256 97-376 2-293 (308)
140 KOG0584 Serine/threonine prote 100.0 1.2E-43 2.7E-48 359.9 15.9 259 96-378 39-304 (632)
141 cd06645 STKc_MAP4K3 Catalytic 100.0 2.1E-42 4.5E-47 342.1 24.3 253 96-372 9-267 (267)
142 cd06644 STKc_STK10_LOK Catalyt 100.0 5.6E-42 1.2E-46 343.8 27.7 259 95-377 11-276 (292)
143 cd08529 STKc_FA2-like Catalyti 100.0 8.6E-42 1.9E-46 335.3 28.4 254 97-373 1-256 (256)
144 cd06610 STKc_OSR1_SPAK Catalyt 100.0 5.7E-42 1.2E-46 338.6 27.3 257 97-373 2-267 (267)
145 KOG0662 Cyclin-dependent kinas 100.0 3.5E-43 7.6E-48 302.8 16.1 259 97-377 3-290 (292)
146 KOG0666 Cyclin C-dependent kin 100.0 8.6E-44 1.9E-48 331.2 13.2 267 97-378 25-345 (438)
147 cd08227 PK_STRAD_alpha Pseudok 100.0 2.5E-42 5.4E-47 352.0 25.4 257 100-376 2-313 (327)
148 cd06619 PKc_MKK5 Catalytic dom 100.0 5.3E-42 1.2E-46 341.6 27.1 251 97-377 2-260 (279)
149 cd06638 STKc_myosinIIIA Cataly 100.0 5.7E-42 1.2E-46 342.6 27.2 263 90-373 12-286 (286)
150 cd06611 STKc_SLK_like Catalyti 100.0 3.5E-42 7.5E-47 343.1 25.4 257 96-376 5-268 (280)
151 cd06636 STKc_MAP4K4_6 Catalyti 100.0 4.7E-42 1E-46 342.5 26.2 256 94-373 14-282 (282)
152 PHA02988 hypothetical protein; 100.0 3.8E-42 8.2E-47 343.1 25.5 241 102-369 26-274 (283)
153 cd08220 STKc_Nek8 Catalytic do 100.0 8.1E-42 1.8E-46 335.5 27.4 255 97-373 1-256 (256)
154 cd06643 STKc_SLK Catalytic dom 100.0 7.3E-42 1.6E-46 341.1 27.5 257 97-377 6-269 (282)
155 cd06639 STKc_myosinIIIB Cataly 100.0 1.4E-41 3.1E-46 340.6 29.7 261 93-374 19-291 (291)
156 PHA03211 serine/threonine kina 100.0 2.6E-42 5.6E-47 363.2 25.4 251 95-375 168-460 (461)
157 cd05611 STKc_Rim15_like Cataly 100.0 4.7E-42 1E-46 338.2 25.6 252 102-376 2-257 (260)
158 cd07847 STKc_CDKL1_4 Catalytic 100.0 4.5E-42 9.8E-47 343.2 25.8 256 96-373 1-286 (286)
159 KOG0696 Serine/threonine prote 100.0 8.5E-44 1.8E-48 342.1 12.3 257 96-376 349-612 (683)
160 cd06609 STKc_MST3_like Catalyt 100.0 5.1E-42 1.1E-46 340.7 25.6 256 97-378 2-259 (274)
161 cd07839 STKc_CDK5 Catalytic do 100.0 1.6E-42 3.4E-47 346.2 22.1 255 97-373 1-284 (284)
162 cd05578 STKc_Yank1 Catalytic d 100.0 2.4E-42 5.2E-47 339.9 22.8 253 97-373 1-258 (258)
163 KOG4721 Serine/threonine prote 100.0 9.4E-44 2E-48 353.9 12.7 237 101-372 129-366 (904)
164 cd06656 STKc_PAK3 Catalytic do 100.0 6.3E-42 1.4E-46 344.2 26.0 260 94-379 17-278 (297)
165 cd08221 STKc_Nek9 Catalytic do 100.0 1.8E-41 3.9E-46 333.1 28.5 254 97-373 1-256 (256)
166 cd05577 STKc_GRK Catalytic dom 100.0 5.7E-42 1.2E-46 341.0 25.1 254 104-376 1-260 (277)
167 KOG0608 Warts/lats-like serine 100.0 4.5E-43 9.8E-48 352.7 17.1 259 97-377 630-935 (1034)
168 cd06646 STKc_MAP4K5 Catalytic 100.0 5E-42 1.1E-46 339.4 24.4 254 95-372 8-267 (267)
169 cd05572 STKc_cGK_PKG Catalytic 100.0 9.1E-42 2E-46 336.6 26.1 250 104-376 1-258 (262)
170 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.3E-41 2.8E-46 339.4 27.4 260 97-377 2-268 (283)
171 cd05633 STKc_GRK3 Catalytic do 100.0 8.9E-42 1.9E-46 339.9 26.0 251 103-377 1-262 (279)
172 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 5.1E-42 1.1E-46 343.0 24.2 262 97-379 2-271 (286)
173 cd06655 STKc_PAK2 Catalytic do 100.0 1.4E-41 3E-46 341.4 27.5 256 96-377 19-276 (296)
174 cd07837 STKc_CdkB_plant Cataly 100.0 1.1E-41 2.4E-46 342.1 26.5 262 97-374 2-295 (295)
175 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.5E-41 3.2E-46 336.0 27.0 253 97-373 1-267 (267)
176 cd07832 STKc_CCRK Catalytic do 100.0 7.8E-42 1.7E-46 341.4 25.2 256 97-374 1-286 (286)
177 cd08218 STKc_Nek1 Catalytic do 100.0 1.9E-41 4.1E-46 333.0 27.2 254 97-373 1-256 (256)
178 KOG2345 Serine/threonine prote 100.0 3E-43 6.5E-48 318.4 12.8 254 95-370 20-296 (302)
179 cd07831 STKc_MOK Catalytic dom 100.0 1.2E-41 2.6E-46 339.3 25.6 253 98-373 1-282 (282)
180 cd07867 STKc_CDC2L6 Catalytic 100.0 9.8E-42 2.1E-46 346.1 25.2 258 101-373 6-317 (317)
181 cd06640 STKc_MST4 Catalytic do 100.0 1.1E-41 2.4E-46 338.9 25.0 256 96-378 4-261 (277)
182 cd06608 STKc_myosinIII_like Ca 100.0 1.7E-41 3.6E-46 336.7 26.1 259 94-373 4-275 (275)
183 cd07845 STKc_CDK10 Catalytic d 100.0 1.5E-41 3.2E-46 343.5 25.5 260 96-377 7-297 (309)
184 PHA03390 pk1 serine/threonine- 100.0 1.7E-41 3.6E-46 335.7 25.2 248 97-375 15-267 (267)
185 cd05106 PTKc_CSF-1R Catalytic 100.0 1.4E-41 3E-46 352.2 25.5 267 96-369 38-367 (374)
186 cd06631 STKc_YSK4 Catalytic do 100.0 2.7E-41 5.9E-46 333.7 26.2 254 97-373 1-265 (265)
187 cd06629 STKc_MAPKKK_Bck1_like 100.0 3.1E-41 6.7E-46 334.7 26.6 256 97-373 2-272 (272)
188 cd06612 STKc_MST1_2 Catalytic 100.0 1.8E-41 3.8E-46 333.1 24.5 252 96-373 3-256 (256)
189 cd06651 STKc_MEKK3 Catalytic d 100.0 4.4E-41 9.6E-46 332.5 27.3 254 97-374 3-265 (266)
190 cd06613 STKc_MAP4K3_like Catal 100.0 3.7E-41 8.1E-46 331.9 26.6 254 96-372 3-262 (262)
191 cd06630 STKc_MEKK1 Catalytic d 100.0 2.2E-41 4.7E-46 334.9 24.9 258 97-374 1-268 (268)
192 cd07841 STKc_CDK7 Catalytic do 100.0 1.8E-41 4E-46 341.0 24.5 261 97-378 1-290 (298)
193 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.1E-41 2.3E-46 340.5 22.5 256 96-373 1-286 (286)
194 cd05104 PTKc_Kit Catalytic dom 100.0 1.9E-41 4.1E-46 351.4 25.1 268 96-370 35-370 (375)
195 cd06658 STKc_PAK5 Catalytic do 100.0 1.1E-41 2.4E-46 341.5 22.4 261 95-381 21-283 (292)
196 cd06616 PKc_MKK4 Catalytic dom 100.0 1.8E-41 3.8E-46 339.4 23.9 263 97-377 5-274 (288)
197 cd07860 STKc_CDK2_3 Catalytic 100.0 1.6E-41 3.6E-46 338.9 23.6 256 97-373 1-284 (284)
198 PLN00009 cyclin-dependent kina 100.0 4.4E-41 9.6E-46 337.6 26.7 262 96-377 2-291 (294)
199 cd06652 STKc_MEKK2 Catalytic d 100.0 8.7E-41 1.9E-45 330.2 27.9 255 96-374 2-265 (265)
200 cd06626 STKc_MEKK4 Catalytic d 100.0 8.7E-41 1.9E-45 329.7 27.9 254 97-373 1-264 (264)
201 cd07849 STKc_ERK1_2_like Catal 100.0 2.4E-41 5.1E-46 346.1 24.4 261 94-379 3-301 (336)
202 cd05606 STKc_beta_ARK Catalyti 100.0 6E-41 1.3E-45 333.8 26.5 250 103-377 1-262 (278)
203 cd07843 STKc_CDC2L1 Catalytic 100.0 1.9E-41 4E-46 340.1 23.0 256 96-373 5-293 (293)
204 cd06607 STKc_TAO Catalytic dom 100.0 7.9E-41 1.7E-45 337.9 27.7 258 94-377 13-274 (307)
205 cd07844 STKc_PCTAIRE_like Cata 100.0 5E-41 1.1E-45 336.6 26.1 255 96-373 5-291 (291)
206 KOG0614 cGMP-dependent protein 100.0 1.2E-43 2.5E-48 349.3 6.3 258 96-376 420-683 (732)
207 cd08219 STKc_Nek3 Catalytic do 100.0 7.9E-41 1.7E-45 328.5 26.2 250 97-370 1-252 (255)
208 cd08217 STKc_Nek2 Catalytic do 100.0 1.4E-40 3E-45 328.1 27.6 256 97-373 1-265 (265)
209 cd06605 PKc_MAPKK Catalytic do 100.0 2.6E-41 5.6E-46 333.8 22.3 256 97-377 2-264 (265)
210 cd05064 PTKc_EphR_A10 Catalyti 100.0 7.1E-41 1.5E-45 331.1 25.4 249 96-369 5-260 (266)
211 cd05096 PTKc_DDR1 Catalytic do 100.0 9.9E-41 2.2E-45 336.7 26.8 268 96-369 5-300 (304)
212 cd06632 STKc_MEKK1_plant Catal 100.0 1.1E-40 2.4E-45 327.7 26.3 254 97-373 1-258 (258)
213 cd07850 STKc_JNK Catalytic dom 100.0 6E-41 1.3E-45 345.5 25.2 259 94-377 14-318 (353)
214 cd07858 STKc_TEY_MAPK_plant Ca 100.0 4.7E-41 1E-45 344.0 24.1 262 94-378 3-299 (337)
215 cd07865 STKc_CDK9 Catalytic do 100.0 9.5E-41 2.1E-45 337.6 25.9 256 96-373 12-310 (310)
216 cd06641 STKc_MST3 Catalytic do 100.0 1.5E-40 3.2E-45 330.8 26.8 255 96-377 4-260 (277)
217 cd07842 STKc_CDK8_like Catalyt 100.0 5E-41 1.1E-45 340.7 23.9 263 97-373 1-316 (316)
218 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.1E-41 4.6E-46 336.9 20.7 255 96-377 4-260 (277)
219 KOG1026 Nerve growth factor re 100.0 5.6E-42 1.2E-46 360.2 17.1 261 96-368 486-756 (774)
220 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.5E-40 3.3E-45 345.9 27.7 268 95-369 36-392 (400)
221 cd07854 STKc_MAPK4_6 Catalytic 100.0 6.3E-41 1.4E-45 343.7 24.6 261 94-379 3-309 (342)
222 cd07833 STKc_CDKL Catalytic do 100.0 6.5E-41 1.4E-45 335.1 24.1 255 97-373 2-288 (288)
223 cd08228 STKc_Nek6 Catalytic do 100.0 1.5E-40 3.2E-45 328.8 26.3 255 96-369 2-260 (267)
224 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3.1E-40 6.8E-45 330.2 28.8 261 97-377 2-273 (287)
225 PRK13184 pknD serine/threonine 100.0 1.2E-40 2.6E-45 365.3 28.0 264 96-370 2-285 (932)
226 cd07836 STKc_Pho85 Catalytic d 100.0 1E-40 2.2E-45 333.1 25.0 256 97-373 1-284 (284)
227 cd06917 STKc_NAK1_like Catalyt 100.0 1.4E-40 3.1E-45 330.9 25.6 256 97-377 2-262 (277)
228 cd08225 STKc_Nek5 Catalytic do 100.0 1.2E-40 2.6E-45 327.3 24.7 255 97-373 1-257 (257)
229 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.9E-40 4.1E-45 332.5 26.4 255 96-373 5-291 (291)
230 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.2E-40 2.7E-45 332.7 25.0 257 96-378 5-274 (284)
231 cd06623 PKc_MAPKK_plant_like C 100.0 2.1E-40 4.6E-45 326.8 26.2 254 97-376 2-262 (264)
232 cd05088 PTKc_Tie2 Catalytic do 100.0 1.3E-40 2.8E-45 335.7 25.0 266 96-370 7-276 (303)
233 cd05581 STKc_PDK1 Catalytic do 100.0 7.5E-41 1.6E-45 333.0 22.7 253 97-373 2-280 (280)
234 cd05048 PTKc_Ror Catalytic Dom 100.0 1.3E-40 2.8E-45 332.2 24.4 265 96-370 5-279 (283)
235 PHA03210 serine/threonine kina 100.0 4.5E-41 9.8E-46 360.3 22.5 268 92-376 144-460 (501)
236 KOG0193 Serine/threonine prote 100.0 9.1E-42 2E-46 344.0 15.8 250 95-369 391-648 (678)
237 KOG1151 Tousled-like protein k 100.0 5.5E-42 1.2E-46 332.2 13.4 274 87-378 454-749 (775)
238 cd06624 STKc_ASK Catalytic dom 100.0 4E-40 8.7E-45 326.0 27.1 249 101-373 13-268 (268)
239 KOG0695 Serine/threonine prote 100.0 1.2E-41 2.7E-46 319.4 15.3 257 96-376 250-522 (593)
240 cd07855 STKc_ERK5 Catalytic do 100.0 6.9E-41 1.5E-45 342.4 22.1 263 95-380 4-304 (334)
241 cd06659 STKc_PAK6 Catalytic do 100.0 1.5E-40 3.3E-45 334.1 24.0 255 98-378 23-279 (297)
242 cd05036 PTKc_ALK_LTK Catalytic 100.0 3E-40 6.5E-45 328.6 25.7 259 96-370 6-274 (277)
243 cd05613 STKc_MSK1_N N-terminal 100.0 2.4E-40 5.1E-45 331.6 25.1 256 97-376 1-274 (290)
244 cd06648 STKc_PAK_II Catalytic 100.0 5.9E-40 1.3E-44 327.9 27.9 256 97-378 20-277 (285)
245 KOG0603 Ribosomal protein S6 k 100.0 1.4E-41 3.1E-46 346.4 16.2 249 93-376 319-569 (612)
246 cd05052 PTKc_Abl Catalytic dom 100.0 3.8E-40 8.2E-45 325.3 25.9 248 96-369 6-257 (263)
247 cd06647 STKc_PAK_I Catalytic d 100.0 2.8E-40 6E-45 331.6 24.8 261 95-381 18-280 (293)
248 cd05579 STKc_MAST_like Catalyt 100.0 2.1E-40 4.5E-45 326.9 23.4 250 104-376 1-263 (265)
249 PTZ00024 cyclin-dependent prot 100.0 3.1E-40 6.6E-45 337.9 25.0 263 94-378 6-321 (335)
250 cd06635 STKc_TAO1 Catalytic do 100.0 7.5E-40 1.6E-44 332.2 27.7 260 93-378 22-285 (317)
251 cd07840 STKc_CDK9_like Catalyt 100.0 3.3E-40 7.2E-45 329.6 24.5 254 98-373 1-287 (287)
252 cd07835 STKc_CDK1_like Catalyt 100.0 2.5E-40 5.5E-45 330.1 23.5 255 98-373 1-283 (283)
253 KOG0194 Protein tyrosine kinas 100.0 8.5E-41 1.8E-45 341.0 20.3 251 97-369 158-415 (474)
254 cd08229 STKc_Nek7 Catalytic do 100.0 3.2E-40 6.9E-45 326.4 23.9 254 97-369 3-260 (267)
255 cd05114 PTKc_Tec_Rlk Catalytic 100.0 6.3E-40 1.4E-44 322.3 25.8 245 97-369 5-253 (256)
256 cd07880 STKc_p38gamma_MAPK12 C 100.0 4.7E-40 1E-44 337.3 25.9 259 94-378 13-306 (343)
257 cd07838 STKc_CDK4_6_like Catal 100.0 7.6E-40 1.7E-44 327.1 26.7 256 98-373 1-287 (287)
258 cd06633 STKc_TAO3 Catalytic do 100.0 1.3E-39 2.8E-44 329.8 28.7 258 94-377 19-280 (313)
259 cd05054 PTKc_VEGFR Catalytic d 100.0 3E-40 6.6E-45 337.5 23.9 268 96-370 7-329 (337)
260 cd06618 PKc_MKK7 Catalytic dom 100.0 6.4E-40 1.4E-44 329.5 25.9 260 96-378 15-281 (296)
261 cd05072 PTKc_Lyn Catalytic dom 100.0 8.4E-40 1.8E-44 322.4 26.0 247 96-369 6-256 (261)
262 cd05089 PTKc_Tie1 Catalytic do 100.0 6E-40 1.3E-44 329.9 25.5 266 96-370 2-271 (297)
263 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.7E-39 3.7E-44 320.8 28.2 254 96-373 2-264 (264)
264 cd08226 PK_STRAD_beta Pseudoki 100.0 2.8E-40 6E-45 337.1 23.2 256 102-377 4-315 (328)
265 cd05049 PTKc_Trk Catalytic dom 100.0 3.9E-40 8.5E-45 328.1 23.5 262 96-369 5-276 (280)
266 cd05061 PTKc_InsR Catalytic do 100.0 1.2E-39 2.5E-44 326.3 26.9 266 95-376 5-286 (288)
267 cd05090 PTKc_Ror1 Catalytic do 100.0 8E-40 1.7E-44 326.6 25.3 266 96-370 5-279 (283)
268 cd07851 STKc_p38 Catalytic dom 100.0 3E-40 6.6E-45 338.8 22.8 260 94-379 13-307 (343)
269 KOG0669 Cyclin T-dependent kin 100.0 1.2E-42 2.5E-47 314.7 4.2 261 96-378 17-323 (376)
270 cd05093 PTKc_TrkB Catalytic do 100.0 1.2E-39 2.5E-44 326.3 26.3 260 96-369 5-274 (288)
271 cd08215 STKc_Nek Catalytic dom 100.0 1.9E-39 4E-44 318.6 27.3 256 97-373 1-258 (258)
272 cd05610 STKc_MASTL Catalytic d 100.0 9.2E-40 2E-44 360.8 28.0 149 96-265 4-152 (669)
273 cd05062 PTKc_IGF-1R Catalytic 100.0 9.6E-40 2.1E-44 325.0 25.5 260 95-370 5-274 (277)
274 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.1E-39 4.5E-44 320.4 27.6 255 96-369 2-260 (267)
275 cd05108 PTKc_EGFR Catalytic do 100.0 7.5E-40 1.6E-44 332.1 25.0 249 96-370 7-264 (316)
276 cd06634 STKc_TAO2 Catalytic do 100.0 1E-39 2.2E-44 329.9 25.6 258 94-377 13-274 (308)
277 cd07834 STKc_MAPK Catalytic do 100.0 2.7E-40 5.9E-45 337.5 21.6 260 97-379 1-298 (330)
278 cd06606 STKc_MAPKKK Catalytic 100.0 2.6E-39 5.6E-44 317.6 27.8 253 97-373 1-260 (260)
279 cd05055 PTKc_PDGFR Catalytic d 100.0 1.5E-39 3.3E-44 327.6 26.6 252 96-369 35-296 (302)
280 cd07879 STKc_p38delta_MAPK13 C 100.0 6.6E-40 1.4E-44 336.2 24.3 258 95-379 14-306 (342)
281 cd06614 STKc_PAK Catalytic dom 100.0 1.6E-39 3.4E-44 325.0 26.4 261 93-378 16-278 (286)
282 cd06657 STKc_PAK4 Catalytic do 100.0 9.5E-40 2.1E-44 327.4 24.5 257 98-380 22-280 (292)
283 cd07864 STKc_CDK12 Catalytic d 100.0 9.7E-40 2.1E-44 329.1 24.7 257 95-373 6-302 (302)
284 cd07877 STKc_p38alpha_MAPK14 C 100.0 1E-39 2.3E-44 335.0 25.3 261 94-380 15-310 (345)
285 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.6E-39 3.4E-44 319.6 25.5 247 96-370 4-254 (256)
286 cd07857 STKc_MPK1 Catalytic do 100.0 1.2E-39 2.7E-44 332.9 25.6 259 97-377 1-299 (332)
287 KOG4645 MAPKKK (MAP kinase kin 100.0 3.1E-42 6.7E-47 372.5 6.5 256 95-376 1234-1500(1509)
288 cd07830 STKc_MAK_like Catalyti 100.0 8.8E-40 1.9E-44 326.1 23.7 255 98-373 1-283 (283)
289 cd05122 PKc_STE Catalytic doma 100.0 4.6E-39 1E-43 314.5 28.2 251 97-372 1-253 (253)
290 KOG0587 Traf2- and Nck-interac 100.0 3.7E-40 8E-45 344.6 21.2 265 88-375 11-287 (953)
291 cd05084 PTKc_Fes Catalytic dom 100.0 1.8E-39 3.8E-44 318.3 24.9 243 102-369 1-248 (252)
292 cd05123 STKc_AGC Catalytic dom 100.0 1.2E-39 2.7E-44 318.8 23.8 245 104-373 1-250 (250)
293 cd06627 STKc_Cdc7_like Catalyt 100.0 4.4E-39 9.5E-44 315.5 27.6 252 97-373 1-254 (254)
294 cd07852 STKc_MAPK15 Catalytic 100.0 9.2E-40 2E-44 334.6 23.7 264 93-379 4-304 (337)
295 cd05053 PTKc_FGFR Catalytic do 100.0 2E-39 4.3E-44 325.4 25.4 266 96-370 12-287 (293)
296 cd07866 STKc_BUR1 Catalytic do 100.0 1.1E-39 2.3E-44 330.1 23.5 256 96-373 8-311 (311)
297 KOG1187 Serine/threonine prote 100.0 4.4E-40 9.5E-45 334.3 20.8 258 88-369 67-347 (361)
298 cd05051 PTKc_DDR Catalytic dom 100.0 2.5E-39 5.3E-44 325.2 26.0 262 96-369 5-292 (296)
299 cd05033 PTKc_EphR Catalytic do 100.0 3.1E-39 6.8E-44 319.2 26.4 250 96-370 4-261 (266)
300 cd05032 PTKc_InsR_like Catalyt 100.0 3.6E-39 7.9E-44 320.7 26.5 258 96-369 6-273 (277)
301 cd05035 PTKc_Axl_like Catalyti 100.0 3.2E-39 7E-44 320.2 25.9 254 98-370 1-268 (273)
302 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.1E-39 2.3E-44 321.6 22.2 248 96-369 6-256 (261)
303 cd05583 STKc_MSK_N N-terminal 100.0 1.4E-39 3E-44 325.7 23.3 256 97-376 1-272 (288)
304 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 4E-39 8.8E-44 328.2 26.9 261 93-379 7-297 (328)
305 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.6E-39 5.6E-44 336.4 25.9 268 96-370 37-395 (401)
306 KOG1006 Mitogen-activated prot 100.0 1.1E-41 2.3E-46 311.0 6.6 265 98-380 66-337 (361)
307 cd05059 PTKc_Tec_like Catalyti 100.0 3.1E-39 6.7E-44 317.4 24.5 246 97-370 5-254 (256)
308 cd05071 PTKc_Src Catalytic dom 100.0 3.9E-39 8.4E-44 317.9 25.3 246 96-369 6-255 (262)
309 cd05118 STKc_CMGC Catalytic do 100.0 1.5E-39 3.3E-44 324.2 22.4 254 98-373 1-283 (283)
310 cd05091 PTKc_Ror2 Catalytic do 100.0 1.8E-39 3.8E-44 324.1 22.8 264 97-370 6-279 (283)
311 cd05098 PTKc_FGFR1 Catalytic d 100.0 4.2E-39 9.2E-44 325.3 25.8 265 96-369 18-294 (307)
312 cd05068 PTKc_Frk_like Catalyti 100.0 5.6E-39 1.2E-43 316.5 25.8 247 96-369 6-256 (261)
313 cd05047 PTKc_Tie Catalytic dom 100.0 5.1E-39 1.1E-43 318.5 25.4 258 103-369 2-263 (270)
314 PF07714 Pkinase_Tyr: Protein 100.0 1.4E-39 3E-44 320.4 21.2 247 99-369 2-257 (259)
315 cd08530 STKc_CNK2-like Catalyt 100.0 5.8E-39 1.3E-43 315.1 25.5 255 97-373 1-256 (256)
316 cd05067 PTKc_Lck_Blk Catalytic 100.0 6.5E-39 1.4E-43 315.9 25.9 247 95-369 5-255 (260)
317 cd05066 PTKc_EphR_A Catalytic 100.0 6.2E-39 1.3E-43 317.3 25.9 249 96-369 4-261 (267)
318 cd05116 PTKc_Syk Catalytic dom 100.0 6.1E-39 1.3E-43 315.5 25.4 241 103-369 2-250 (257)
319 KOG0668 Casein kinase II, alph 100.0 1.2E-40 2.6E-45 297.7 11.8 254 96-377 38-329 (338)
320 cd08216 PK_STRAD Pseudokinase 100.0 2.6E-39 5.6E-44 327.9 23.3 250 108-377 12-302 (314)
321 cd05075 PTKc_Axl Catalytic dom 100.0 5.8E-39 1.3E-43 318.3 25.3 254 98-370 1-267 (272)
322 cd05109 PTKc_HER2 Catalytic do 100.0 7.4E-39 1.6E-43 318.9 26.0 248 96-369 7-263 (279)
323 cd00192 PTKc Catalytic domain 100.0 6.8E-39 1.5E-43 315.4 25.3 252 102-370 1-260 (262)
324 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.1E-38 2.4E-43 323.3 27.5 266 95-369 11-288 (314)
325 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 7E-39 1.5E-43 315.6 25.3 247 95-369 5-255 (260)
326 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.4E-39 7.4E-44 330.9 23.9 268 96-370 7-335 (343)
327 cd05101 PTKc_FGFR2 Catalytic d 100.0 6.4E-39 1.4E-43 323.5 25.4 266 96-370 15-292 (304)
328 KOG1095 Protein tyrosine kinas 100.0 1.8E-39 3.8E-44 353.5 22.5 256 95-369 691-956 (1025)
329 cd05094 PTKc_TrkC Catalytic do 100.0 8E-39 1.7E-43 320.7 25.7 263 96-369 5-277 (291)
330 cd05092 PTKc_TrkA Catalytic do 100.0 7.7E-39 1.7E-43 319.0 24.8 262 96-369 5-276 (280)
331 KOG4278 Protein tyrosine kinas 100.0 2E-40 4.3E-45 332.8 13.3 316 21-368 197-517 (1157)
332 cd05111 PTK_HER3 Pseudokinase 100.0 1.2E-38 2.6E-43 317.4 26.1 248 96-369 7-263 (279)
333 cd05065 PTKc_EphR_B Catalytic 100.0 1.2E-38 2.6E-43 315.6 25.8 248 97-369 5-263 (269)
334 cd08222 STKc_Nek11 Catalytic d 100.0 3.9E-39 8.4E-44 317.4 22.2 256 97-373 1-260 (260)
335 cd05082 PTKc_Csk Catalytic dom 100.0 1.3E-38 2.9E-43 312.9 25.8 243 96-369 6-251 (256)
336 cd05115 PTKc_Zap-70 Catalytic 100.0 1.4E-38 3.1E-43 312.9 26.0 241 103-369 2-250 (257)
337 cd05069 PTKc_Yes Catalytic dom 100.0 1.4E-38 3E-43 313.6 25.7 246 96-369 6-255 (260)
338 cd07829 STKc_CDK_like Catalyti 100.0 4.7E-39 1E-43 320.5 22.6 254 98-373 1-282 (282)
339 KOG1035 eIF-2alpha kinase GCN2 100.0 2.1E-39 4.6E-44 349.0 21.3 254 96-375 479-876 (1351)
340 cd05034 PTKc_Src_like Catalyti 100.0 1.9E-38 4.1E-43 312.6 26.0 248 95-369 5-256 (261)
341 cd05060 PTKc_Syk_like Catalyti 100.0 2.1E-38 4.5E-43 311.7 26.0 241 102-369 1-250 (257)
342 PLN03225 Serine/threonine-prot 100.0 1.9E-38 4.1E-43 341.9 27.9 356 95-480 131-544 (566)
343 cd05097 PTKc_DDR_like Catalyti 100.0 1.4E-38 3E-43 319.7 24.9 263 96-369 5-291 (295)
344 cd05045 PTKc_RET Catalytic dom 100.0 1.5E-38 3.2E-43 318.6 25.0 264 97-369 1-281 (290)
345 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.9E-38 4E-43 316.7 25.6 248 96-369 3-276 (283)
346 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.9E-38 4.1E-43 324.4 26.0 266 96-370 12-289 (334)
347 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.7E-38 5.9E-43 312.9 26.3 249 96-369 5-262 (268)
348 cd05057 PTKc_EGFR_like Catalyt 100.0 3.1E-38 6.7E-43 314.5 26.6 248 96-369 7-263 (279)
349 cd05039 PTKc_Csk_like Catalyti 100.0 3E-38 6.6E-43 310.3 25.9 244 96-369 6-251 (256)
350 smart00219 TyrKc Tyrosine kina 100.0 3.5E-38 7.6E-43 309.8 25.9 248 98-369 1-256 (258)
351 cd05095 PTKc_DDR2 Catalytic do 100.0 3E-38 6.5E-43 317.4 25.7 262 96-369 5-292 (296)
352 cd05050 PTKc_Musk Catalytic do 100.0 2.5E-38 5.5E-43 316.6 24.9 265 96-369 5-284 (288)
353 cd05042 PTKc_Aatyk Catalytic d 100.0 3.2E-38 6.8E-43 312.6 25.1 248 103-369 2-265 (269)
354 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 5.2E-38 1.1E-42 311.1 26.5 249 102-369 1-265 (269)
355 cd05046 PTK_CCK4 Pseudokinase 100.0 4E-38 8.6E-43 312.9 25.3 259 96-370 5-272 (275)
356 cd05040 PTKc_Ack_like Catalyti 100.0 4.6E-38 9.9E-43 309.2 25.2 244 102-369 1-253 (257)
357 cd05112 PTKc_Itk Catalytic dom 100.0 5.5E-38 1.2E-42 308.4 25.8 246 97-370 5-254 (256)
358 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 9.3E-39 2E-43 314.4 20.0 241 102-370 1-256 (258)
359 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 3.1E-38 6.6E-43 315.3 24.0 250 97-370 5-279 (284)
360 cd05083 PTKc_Chk Catalytic dom 100.0 4.2E-38 9E-43 309.0 24.5 242 96-369 6-249 (254)
361 cd05085 PTKc_Fer Catalytic dom 100.0 7.9E-38 1.7E-42 306.2 26.3 242 102-369 1-246 (250)
362 cd05073 PTKc_Hck Catalytic dom 100.0 8.5E-38 1.8E-42 307.9 26.4 247 95-369 5-255 (260)
363 cd08528 STKc_Nek10 Catalytic d 100.0 7.2E-38 1.6E-42 310.0 25.7 256 97-370 1-266 (269)
364 cd05056 PTKc_FAK Catalytic dom 100.0 7.6E-38 1.6E-42 310.1 25.8 248 96-369 6-260 (270)
365 cd05041 PTKc_Fes_like Catalyti 100.0 9.2E-38 2E-42 305.9 25.8 242 102-369 1-247 (251)
366 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 8.7E-38 1.9E-42 312.0 26.0 249 96-369 4-278 (284)
367 KOG4250 TANK binding protein k 100.0 1.4E-39 3E-44 334.3 12.7 249 97-362 14-296 (732)
368 cd05043 PTK_Ryk Pseudokinase d 100.0 1.1E-37 2.3E-42 310.7 25.9 256 96-369 6-271 (280)
369 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 7.2E-38 1.6E-42 308.8 24.3 241 102-370 1-260 (262)
370 cd05576 STKc_RPK118_like Catal 100.0 3E-38 6.4E-43 306.7 21.1 228 107-373 4-237 (237)
371 cd05110 PTKc_HER4 Catalytic do 100.0 1.1E-37 2.5E-42 314.2 24.8 249 96-370 7-264 (303)
372 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 8.4E-38 1.8E-42 310.4 23.3 240 103-370 2-272 (274)
373 cd05044 PTKc_c-ros Catalytic d 100.0 9E-38 1.9E-42 309.2 23.4 251 103-369 2-265 (269)
374 KOG0670 U4/U6-associated splic 100.0 1.5E-39 3.2E-44 321.2 10.1 263 91-375 427-751 (752)
375 cd05058 PTKc_Met_Ron Catalytic 100.0 1.8E-37 3.9E-42 305.8 24.6 243 102-369 1-254 (262)
376 cd05086 PTKc_Aatyk2 Catalytic 100.0 4.3E-37 9.4E-42 304.4 26.1 247 103-369 2-264 (268)
377 KOG0196 Tyrosine kinase, EPH ( 100.0 6.6E-39 1.4E-43 330.5 13.0 248 97-369 630-886 (996)
378 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.1E-37 4.5E-42 304.7 22.7 238 102-369 1-256 (259)
379 KOG1290 Serine/threonine prote 100.0 1.2E-37 2.6E-42 306.4 20.4 272 86-379 67-559 (590)
380 PHA02882 putative serine/threo 100.0 3.7E-37 8E-42 309.0 24.2 250 93-369 9-291 (294)
381 cd05074 PTKc_Tyro3 Catalytic d 100.0 4.5E-37 9.7E-42 304.9 24.1 253 98-369 1-267 (273)
382 KOG4257 Focal adhesion tyrosin 100.0 4.1E-38 8.9E-43 316.8 16.5 244 99-368 392-643 (974)
383 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4.5E-37 9.7E-42 306.6 23.4 250 96-369 4-278 (284)
384 KOG0199 ACK and related non-re 100.0 4.2E-38 9.1E-43 320.5 15.6 257 96-377 110-375 (1039)
385 KOG1094 Discoidin domain recep 100.0 3.6E-37 7.8E-42 308.3 18.0 254 94-369 536-799 (807)
386 PLN03224 probable serine/threo 100.0 5.7E-36 1.2E-40 314.6 25.8 275 95-375 144-505 (507)
387 KOG0665 Jun-N-terminal kinase 100.0 3.3E-37 7.2E-42 289.0 10.7 254 95-374 16-314 (369)
388 smart00220 S_TKc Serine/Threon 100.0 2.9E-35 6.2E-40 285.7 23.5 242 108-373 1-244 (244)
389 KOG0664 Nemo-like MAPK-related 100.0 1.2E-37 2.7E-42 285.1 3.9 256 99-377 56-350 (449)
390 KOG1027 Serine/threonine prote 100.0 2.1E-36 4.6E-41 315.1 12.4 254 98-376 511-773 (903)
391 KOG0984 Mitogen-activated prot 100.0 1.2E-35 2.7E-40 261.8 14.3 216 98-332 48-270 (282)
392 KOG1167 Serine/threonine prote 100.0 3.9E-36 8.4E-41 292.4 11.8 256 94-376 34-387 (418)
393 KOG0576 Mitogen-activated prot 100.0 4.7E-36 1E-40 304.8 6.5 260 93-376 12-277 (829)
394 KOG2052 Activin A type IB rece 100.0 2.2E-34 4.8E-39 280.8 16.4 248 92-368 207-497 (513)
395 KOG1152 Signal transduction se 100.0 8.2E-35 1.8E-39 291.2 11.3 200 97-317 562-771 (772)
396 KOG0200 Fibroblast/platelet-de 100.0 3.4E-33 7.3E-38 304.1 23.8 262 97-369 297-574 (609)
397 KOG3653 Transforming growth fa 100.0 4.9E-34 1.1E-38 280.4 14.8 239 97-365 211-494 (534)
398 PLN00113 leucine-rich repeat r 100.0 1.1E-33 2.3E-38 328.8 20.0 240 96-370 690-947 (968)
399 KOG1345 Serine/threonine kinas 100.0 4.2E-34 9.1E-39 261.9 8.7 256 94-374 22-291 (378)
400 KOG1025 Epidermal growth facto 100.0 2.5E-33 5.5E-38 290.3 15.5 246 98-369 698-952 (1177)
401 cd00180 PKc Catalytic domain o 100.0 1.9E-29 4.1E-34 238.8 23.0 212 104-371 1-215 (215)
402 smart00221 STYKc Protein kinas 100.0 4.4E-29 9.6E-34 239.5 21.8 211 98-331 1-218 (225)
403 PLN00181 protein SPA1-RELATED; 100.0 1.5E-30 3.2E-35 294.6 9.8 198 157-376 33-271 (793)
404 KOG1024 Receptor-like protein 100.0 1.2E-27 2.6E-32 229.8 19.6 256 96-369 284-550 (563)
405 KOG0590 Checkpoint kinase and 100.0 3.2E-29 6.9E-34 269.3 4.2 260 96-377 317-592 (601)
406 KOG1163 Casein kinase (serine/ 99.9 5.4E-27 1.2E-31 211.9 14.7 248 95-364 14-274 (341)
407 KOG1164 Casein kinase (serine/ 99.9 6.5E-26 1.4E-30 229.7 23.7 255 97-370 19-293 (322)
408 COG0515 SPS1 Serine/threonine 99.9 2.5E-25 5.3E-30 225.7 26.3 259 98-377 2-282 (384)
409 smart00750 KIND kinase non-cat 99.9 5E-27 1.1E-31 216.8 12.3 153 208-375 11-170 (176)
410 KOG1165 Casein kinase (serine/ 99.9 2.6E-26 5.6E-31 216.7 16.1 210 96-327 28-251 (449)
411 KOG0603 Ribosomal protein S6 k 99.9 6.6E-28 1.4E-32 246.6 4.3 242 103-377 1-250 (612)
412 PRK09188 serine/threonine prot 99.9 3.6E-26 7.8E-31 230.8 15.9 175 93-299 15-210 (365)
413 KOG0606 Microtubule-associated 99.9 1.6E-25 3.4E-30 239.8 10.1 223 94-378 81-323 (1205)
414 COG5126 FRQ1 Ca2+-binding prot 99.9 4.1E-24 8.9E-29 185.8 12.5 142 409-557 10-157 (160)
415 PRK12274 serine/threonine prot 99.9 2.1E-23 4.7E-28 191.4 15.1 189 99-320 5-212 (218)
416 KOG0027 Calmodulin and related 99.9 2E-23 4.4E-28 186.6 12.6 143 413-557 2-150 (151)
417 PRK10359 lipopolysaccharide co 99.9 2.6E-23 5.6E-28 195.3 13.2 175 93-309 28-216 (232)
418 cd05147 RIO1_euk RIO kinase fa 99.9 2.8E-23 6.1E-28 193.1 13.3 142 101-267 2-167 (190)
419 PF14531 Kinase-like: Kinase-l 99.9 3.1E-23 6.7E-28 200.6 11.1 241 97-361 13-288 (288)
420 KOG4158 BRPK/PTEN-induced prot 99.9 9.8E-23 2.1E-27 196.7 12.0 191 154-365 273-505 (598)
421 cd05145 RIO1_like RIO kinase f 99.9 6.4E-22 1.4E-26 184.7 16.1 143 101-268 2-168 (190)
422 PRK10345 hypothetical protein; 99.9 2.4E-21 5.3E-26 181.7 15.5 138 101-264 7-156 (210)
423 KOG0195 Integrin-linked kinase 99.9 1.5E-22 3.3E-27 186.1 6.1 241 98-368 192-440 (448)
424 KOG1240 Protein kinase contain 99.9 2.5E-22 5.4E-27 215.5 6.2 245 97-370 24-291 (1431)
425 KOG1166 Mitotic checkpoint ser 99.8 1.6E-20 3.4E-25 205.9 11.7 196 95-314 697-902 (974)
426 KOG0028 Ca2+-binding protein ( 99.8 7.1E-20 1.5E-24 154.6 12.0 141 410-556 24-170 (172)
427 smart00090 RIO RIO-like kinase 99.8 1E-19 2.2E-24 175.0 13.3 146 97-268 29-199 (237)
428 KOG0590 Checkpoint kinase and 99.8 2E-21 4.3E-26 209.3 -1.1 260 96-375 20-291 (601)
429 KOG1023 Natriuretic peptide re 99.8 7.6E-19 1.6E-23 180.7 13.0 199 151-369 2-219 (484)
430 KOG1033 eIF-2alpha kinase PEK/ 99.8 1E-19 2.3E-24 183.3 5.8 178 170-373 329-515 (516)
431 PTZ00183 centrin; Provisional 99.8 1.5E-18 3.2E-23 157.2 12.7 142 410-557 8-155 (158)
432 PTZ00184 calmodulin; Provision 99.8 1.5E-18 3.3E-23 155.3 11.7 141 410-556 2-148 (149)
433 PRK14879 serine/threonine prot 99.8 5.5E-18 1.2E-22 161.3 15.2 137 102-266 2-143 (211)
434 cd05144 RIO2_C RIO kinase fami 99.8 6.1E-18 1.3E-22 159.2 12.8 139 98-268 17-176 (198)
435 TIGR03724 arch_bud32 Kae1-asso 99.7 1.1E-17 2.5E-22 157.5 13.5 134 103-267 1-139 (199)
436 KOG0031 Myosin regulatory ligh 99.7 1.1E-17 2.3E-22 140.2 11.5 135 411-555 24-164 (171)
437 PRK09605 bifunctional UGMP fam 99.7 2E-17 4.3E-22 179.1 15.2 142 94-267 331-477 (535)
438 cd05119 RIO RIO kinase family, 99.7 4.1E-17 8.9E-22 152.1 12.8 141 101-268 2-165 (187)
439 KOG0030 Myosin essential light 99.7 2.3E-17 4.9E-22 135.9 8.9 139 412-555 4-150 (152)
440 KOG0034 Ca2+/calmodulin-depend 99.7 7.4E-17 1.6E-21 145.9 10.3 137 411-557 25-176 (187)
441 KOG0601 Cyclin-dependent kinas 99.7 3.5E-17 7.5E-22 168.5 5.6 259 93-375 111-384 (524)
442 KOG0606 Microtubule-associated 99.7 1.5E-17 3.3E-22 179.1 2.8 260 96-377 804-1099(1205)
443 PRK01723 3-deoxy-D-manno-octul 99.7 1.2E-15 2.7E-20 147.0 15.2 139 101-267 36-192 (239)
444 cd05120 APH_ChoK_like Aminogly 99.7 1.1E-15 2.3E-20 136.8 12.8 134 100-267 2-139 (155)
445 KOG0044 Ca2+ sensor (EF-Hand s 99.6 6.4E-16 1.4E-20 139.7 10.4 139 411-557 21-176 (193)
446 KOG0037 Ca2+-binding protein, 99.6 2.8E-15 6.2E-20 134.3 10.5 126 419-556 57-188 (221)
447 KOG4223 Reticulocalbin, calume 99.5 5.8E-14 1.3E-18 133.2 8.6 135 419-555 163-304 (325)
448 KOG0036 Predicted mitochondria 99.5 1.8E-13 3.9E-18 133.1 9.5 133 414-558 9-148 (463)
449 TIGR01982 UbiB 2-polyprenylphe 99.5 5.1E-13 1.1E-17 140.0 13.5 144 101-268 122-308 (437)
450 cd05146 RIO3_euk RIO kinase fa 99.4 1.7E-12 3.8E-17 119.6 14.3 141 102-267 3-174 (197)
451 KOG4223 Reticulocalbin, calume 99.4 3.6E-13 7.9E-18 127.8 9.2 140 416-556 74-228 (325)
452 PRK04750 ubiB putative ubiquin 99.4 1.3E-13 2.8E-18 145.9 6.1 151 97-268 121-315 (537)
453 cd05151 ChoK Choline Kinase (C 99.4 1.5E-12 3.2E-17 119.2 11.7 129 101-266 3-136 (170)
454 KOG0601 Cyclin-dependent kinas 99.4 1.7E-13 3.7E-18 141.4 5.9 251 95-374 264-518 (524)
455 KOG1266 Protein kinase [Signal 99.4 7.1E-14 1.5E-18 132.9 1.8 240 111-375 81-336 (458)
456 KOG1243 Protein kinase [Genera 99.3 2.8E-11 6.1E-16 126.2 15.1 182 98-311 15-199 (690)
457 KOG3087 Serine/threonine prote 99.3 6.8E-11 1.5E-15 104.4 15.1 150 100-267 11-166 (229)
458 KOG3741 Poly(A) ribonuclease s 99.3 5.7E-10 1.2E-14 113.0 21.4 226 109-370 289-521 (655)
459 KOG0044 Ca2+ sensor (EF-Hand s 99.2 1.9E-11 4.1E-16 110.8 7.9 118 417-535 62-184 (193)
460 PLN02964 phosphatidylserine de 99.2 2.1E-11 4.5E-16 130.1 9.3 104 412-526 136-243 (644)
461 COG3642 Mn2+-dependent serine/ 99.2 1.9E-10 4.1E-15 102.3 13.6 135 102-267 2-141 (204)
462 KOG0038 Ca2+-binding kinase in 99.2 2.4E-11 5.3E-16 101.0 6.3 95 457-556 72-177 (189)
463 cd05022 S-100A13 S-100A13: S-1 99.1 7E-11 1.5E-15 93.9 5.0 69 416-484 5-75 (89)
464 PF13499 EF-hand_7: EF-hand do 99.1 8.6E-11 1.9E-15 89.0 5.4 55 500-554 2-66 (66)
465 COG4248 Uncharacterized protei 99.1 1.7E-09 3.6E-14 107.0 15.5 246 99-366 14-292 (637)
466 cd05022 S-100A13 S-100A13: S-1 99.1 1.6E-10 3.4E-15 92.0 6.5 62 497-558 7-77 (89)
467 KOG0037 Ca2+-binding protein, 99.1 2E-10 4.4E-15 103.4 7.7 92 417-521 122-215 (221)
468 cd05154 ACAD10_11_like Acyl-Co 99.1 6.8E-10 1.5E-14 106.2 12.1 84 102-188 4-91 (223)
469 PF13499 EF-hand_7: EF-hand do 99.1 1.3E-10 2.9E-15 88.0 4.4 62 420-482 1-66 (66)
470 KOG0377 Protein serine/threoni 99.0 7.6E-10 1.7E-14 108.5 9.6 148 418-567 463-626 (631)
471 cd05027 S-100B S-100B: S-100B 99.0 4E-10 8.8E-15 89.8 5.7 69 416-484 5-79 (88)
472 KOG2137 Protein kinase [Signal 99.0 6.6E-10 1.4E-14 116.7 6.5 154 220-377 105-272 (700)
473 cd05027 S-100B S-100B: S-100B 99.0 1.4E-09 3E-14 86.8 6.4 60 498-557 8-80 (88)
474 smart00027 EH Eps15 homology d 98.9 1.5E-09 3.2E-14 88.8 6.1 73 412-487 3-75 (96)
475 PF01163 RIO1: RIO1 family; I 98.9 6.7E-09 1.4E-13 95.5 11.1 130 111-268 1-157 (188)
476 PRK15123 lipopolysaccharide co 98.9 3.4E-08 7.4E-13 96.4 16.2 139 110-266 36-194 (268)
477 COG5126 FRQ1 Ca2+-binding prot 98.9 9.3E-09 2E-13 90.1 10.8 107 409-525 49-155 (160)
478 PTZ00183 centrin; Provisional 98.9 4.4E-09 9.6E-14 94.9 8.9 101 420-526 54-154 (158)
479 cd05026 S-100Z S-100Z: S-100Z 98.9 2.1E-09 4.5E-14 87.0 6.0 69 416-484 7-81 (93)
480 cd05029 S-100A6 S-100A6: S-100 98.9 2.7E-09 5.8E-14 85.1 5.9 69 415-483 6-78 (88)
481 KOG0027 Calmodulin and related 98.9 8.2E-09 1.8E-13 92.2 9.7 98 455-558 7-115 (151)
482 COG0478 RIO-like serine/threon 98.9 1.3E-08 2.8E-13 96.1 11.2 138 98-265 93-250 (304)
483 cd05026 S-100Z S-100Z: S-100Z 98.9 4.4E-09 9.6E-14 85.1 6.8 60 498-557 10-82 (93)
484 cd05025 S-100A1 S-100A1: S-100 98.8 5.7E-09 1.2E-13 84.6 6.0 68 417-484 7-80 (92)
485 cd00213 S-100 S-100: S-100 dom 98.8 4.9E-09 1.1E-13 84.3 5.5 70 415-484 4-79 (88)
486 cd05031 S-100A10_like S-100A10 98.8 4.8E-09 1E-13 85.4 5.3 68 417-484 6-79 (94)
487 PTZ00184 calmodulin; Provision 98.8 2.6E-08 5.7E-13 88.7 9.7 101 419-525 47-147 (149)
488 KOG0034 Ca2+/calmodulin-depend 98.8 2.8E-08 6E-13 90.3 9.5 112 421-532 68-181 (187)
489 cd05023 S-100A11 S-100A11: S-1 98.8 1.1E-08 2.3E-13 81.7 6.0 62 497-558 8-82 (89)
490 cd05029 S-100A6 S-100A6: S-100 98.8 1.6E-08 3.5E-13 80.6 6.4 62 497-558 9-81 (88)
491 cd00052 EH Eps15 homology doma 98.8 1.3E-08 2.8E-13 77.2 5.7 61 421-484 1-61 (67)
492 KOG0576 Mitogen-activated prot 98.8 8.5E-10 1.9E-14 114.4 -1.2 240 97-375 243-489 (829)
493 cd05031 S-100A10_like S-100A10 98.8 1.2E-08 2.5E-13 83.1 5.6 62 498-559 8-82 (94)
494 cd05023 S-100A11 S-100A11: S-1 98.8 1.3E-08 2.9E-13 81.2 5.8 70 415-484 5-80 (89)
495 cd05025 S-100A1 S-100A1: S-100 98.7 2.3E-08 5.1E-13 81.0 6.3 60 498-557 9-81 (92)
496 cd00252 SPARC_EC SPARC_EC; ext 98.7 3.8E-08 8.3E-13 82.3 7.2 60 496-555 46-107 (116)
497 cd00052 EH Eps15 homology doma 98.7 2.4E-08 5.3E-13 75.7 5.5 57 501-557 2-62 (67)
498 KOG0028 Ca2+-binding protein ( 98.7 5.7E-08 1.2E-12 83.0 8.0 102 419-526 69-170 (172)
499 smart00027 EH Eps15 homology d 98.7 3.8E-08 8.3E-13 80.4 6.6 62 497-558 9-74 (96)
500 PF13833 EF-hand_8: EF-hand do 98.7 3.6E-08 7.7E-13 71.2 5.6 51 432-483 1-52 (54)
No 1
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.4e-63 Score=477.51 Aligned_cols=273 Identities=36% Similarity=0.627 Sum_probs=246.1
Q ss_pred CccccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchh----hHHHHHHHHHHHHHhcCCCCeeEEE
Q 008127 88 FGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPI----AVEDVKREVKILQALAGHENVVKFY 163 (577)
Q Consensus 88 ~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~----~~~~~~~E~~~l~~l~~hpniv~~~ 163 (577)
....+.+.+.|.+.+.||+|+||.|-+|..+.||+.||||++.+....... ....+.+|++||++| +|||||+++
T Consensus 164 ~~~pks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL-~HP~IV~~~ 242 (475)
T KOG0615|consen 164 KVPPKSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKL-SHPNIVRIK 242 (475)
T ss_pred cCccchhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhc-CCCCEEEEe
Confidence 344566788899999999999999999999999999999999876553311 233468999999999 599999999
Q ss_pred EEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCC
Q 008127 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 243 (577)
Q Consensus 164 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~ 243 (577)
++|+..++.||||||++||+|++++..+ +.+.+...+.+++|++.||.|||++||+||||||+
T Consensus 243 d~f~~~ds~YmVlE~v~GGeLfd~vv~n-----------------k~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPe 305 (475)
T KOG0615|consen 243 DFFEVPDSSYMVLEYVEGGELFDKVVAN-----------------KYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPE 305 (475)
T ss_pred eeeecCCceEEEEEEecCccHHHHHHhc-----------------cccccchhHHHHHHHHHHHHHHHHcCcccccCCcc
Confidence 9999999999999999999999988655 77889999999999999999999999999999999
Q ss_pred cEEeecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccCC----CCCCchhhHHHHHHHHHhCCCCCCCCC
Q 008127 244 NFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKT 319 (577)
Q Consensus 244 NILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~DiwSlG~il~el~tg~~Pf~~~~ 319 (577)
|||+....++..+||+|||+|+.......+.+.||||.|.|||++.++. ..++||||||||||-+++|.+||.+..
T Consensus 306 NILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~ 385 (475)
T KOG0615|consen 306 NILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEY 385 (475)
T ss_pred eEEeccCCcceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCccccc
Confidence 9999976677899999999999998888889999999999999997542 458999999999999999999998876
Q ss_pred hhH-HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 320 EDG-IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 320 ~~~-~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.+. ..++|.++...+....|..+|+++.+||.+||..||++|||+.++|+||||+....
T Consensus 386 ~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~ 445 (475)
T KOG0615|consen 386 TDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPC 445 (475)
T ss_pred CCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcccc
Confidence 655 89999999999988999999999999999999999999999999999999997653
No 2
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6e-58 Score=463.11 Aligned_cols=258 Identities=36% Similarity=0.635 Sum_probs=240.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|...+.||+|||+.||.+++..+|+.||+|++.+..+..+...+.+.+||+|.++|. |||||+++++|++.+++|||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~-HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLK-HPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcC-CCcEEeeeeEeecCCceEEE
Confidence 57999999999999999999999999999999999988888888999999999999995 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
.|+|+.++|...+.+ .+.++|.+++.++.||+.||.|||+++|||||||..|++|+ ++.+
T Consensus 97 LELC~~~sL~el~Kr-----------------rk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~---~~~~ 156 (592)
T KOG0575|consen 97 LELCHRGSLMELLKR-----------------RKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLN---ENMN 156 (592)
T ss_pred EEecCCccHHHHHHh-----------------cCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeec---CcCc
Confidence 999999999887653 48899999999999999999999999999999999999998 5889
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
|||+|||||..+... ++..+.||||-|+|||++... .+..+||||+|||+|-|++|++||...+..+.+..|......
T Consensus 157 VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~ 236 (592)
T KOG0575|consen 157 VKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYS 236 (592)
T ss_pred EEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcc
Confidence 999999999998744 677899999999999998754 599999999999999999999999999999999999998877
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
++. .+|.++++||.+||..||.+|||+++||.|+||+....
T Consensus 237 ~P~----~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g~~ 277 (592)
T KOG0575|consen 237 MPS----HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSGFT 277 (592)
T ss_pred ccc----ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCCCc
Confidence 664 68999999999999999999999999999999966543
No 3
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-59 Score=423.39 Aligned_cols=298 Identities=32% Similarity=0.649 Sum_probs=268.8
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.|.+.|.+.+.||+|.|+.||++.+..||+.+|+|+|....+.. ...+.+.+|++|-+.|+ |||||++.+.+...+..
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~-~~~e~l~rEarIC~~Lq-HP~IvrL~~ti~~~~~~ 85 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQ-HPNIVRLHDSIQEESFH 85 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhcc-ccHHHHHHHHHHHHhcC-CCcEeehhhhhccccee
Confidence 35678999999999999999999999999999999998766543 36788999999999995 99999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|||+|++.|++|...+.+. ..+++..+-.+++||++||.|||.+||||||+||+|+||.+...
T Consensus 86 ylvFe~m~G~dl~~eIV~R-----------------~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~ 148 (355)
T KOG0033|consen 86 YLVFDLVTGGELFEDIVAR-----------------EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAK 148 (355)
T ss_pred EEEEecccchHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccC
Confidence 9999999999998776544 44789999999999999999999999999999999999998777
Q ss_pred CCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
..-|||+|||+|..+..+.....++|||.|||||++.. .++.++||||.|||||-|+.|.+||++.+...+++.|+.+.
T Consensus 149 ~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~ 228 (355)
T KOG0033|consen 149 GAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGA 228 (355)
T ss_pred CCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccc
Confidence 88899999999998887777778999999999999875 56899999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCC-CCCcccHHHHHhhHHhhhhhhhhHHHHHhhc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA-SEIPIDISVLNNMRQFVKYSRLKQFALRALA 410 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~-~~~~~~~~~~~~lk~~~~~s~l~~~~l~~~~ 410 (577)
..++.+.|+.+++++++||.+||..||.+|+|+.|+|+|||+++.... +.++. ....+.|+.|....+|+..++..+.
T Consensus 229 yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~~~As~~H~-~dtvd~lrkfNarRKLKgavLtav~ 307 (355)
T KOG0033|consen 229 YDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRERVASAIHR-QDTVDCLKKFNARRKLKGAILTTVI 307 (355)
T ss_pred cCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcchHHHHHHhhh-HHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999986543 33333 3557889999999999998877664
No 4
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=4e-57 Score=433.09 Aligned_cols=257 Identities=31% Similarity=0.586 Sum_probs=234.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|+++++||+|+||+||+++.+.|++.||+|++.+..+......+....|..||..+ +||.||+++-.|++.+.+|+|
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v-~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKI-KHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhC-CCCcEeeeEEecccCCeEEEE
Confidence 4799999999999999999999999999999999998877666788899999999998 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
+||+.||+|+.+|.+ .+.|++..++.++.+|+.||.|||++|||||||||+||||+ .+|+
T Consensus 104 ld~~~GGeLf~hL~~-----------------eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd---~~GH 163 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQR-----------------EGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLD---EQGH 163 (357)
T ss_pred EeccCCccHHHHHHh-----------------cCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeec---CCCc
Confidence 999999999877754 48899999999999999999999999999999999999999 6899
Q ss_pred eeEEecCCCcc-cCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDF-IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~-~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
|+|+|||+++. ...+....++|||+.|||||++.+ .++.++|+||||+++|+|++|.+||.+.+...++++|+.++..
T Consensus 164 i~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~ 243 (357)
T KOG0598|consen 164 IKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLP 243 (357)
T ss_pred EEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCC
Confidence 99999999984 455566778999999999998765 5699999999999999999999999999999999999998733
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCC----CHHHHhcCcccccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL----TAAQALSHPWVREG 376 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rp----t~~~il~hp~f~~~ 376 (577)
.+. ..++.++++||+++|..||++|. .+.++-+||||+..
T Consensus 244 ~~p---~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~i 287 (357)
T KOG0598|consen 244 LPP---GYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGI 287 (357)
T ss_pred CCC---ccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccC
Confidence 222 23789999999999999999996 78999999999975
No 5
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-55 Score=447.01 Aligned_cols=323 Identities=53% Similarity=0.907 Sum_probs=286.9
Q ss_pred cccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 90 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
....+...|.+.+.||.|.||.||+|+++.||+.+|+|.+.+...........+.+|+.+|+++..|||||.++++|++.
T Consensus 29 ~~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~ 108 (382)
T KOG0032|consen 29 FSEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDP 108 (382)
T ss_pred ccccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcC
Confidence 34556778999999999999999999999999999999998887655556688999999999997799999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
..+++|||+|.||+|++.+... .+++..+..++.||+.|+.|||+.||+||||||+|+|+..
T Consensus 109 ~~~~lvmEL~~GGeLfd~i~~~------------------~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~ 170 (382)
T KOG0032|consen 109 DSVYLVMELCEGGELFDRIVKK------------------HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLAS 170 (382)
T ss_pred CeEEEEEEecCCchHHHHHHHc------------------cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeecc
Confidence 9999999999999999988532 2899999999999999999999999999999999999987
Q ss_pred CCC-CCCeeEEecCCCcccCCCCCccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 250 AKE-DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 250 ~~~-~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
..+ ++.+|++|||+|............+||+.|+|||++. ..++..+||||+||++|.|++|.+||++.+..+.+..+
T Consensus 171 ~~~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i 250 (382)
T KOG0032|consen 171 KDEGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAI 250 (382)
T ss_pred ccCCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHH
Confidence 544 4589999999999988877788999999999999998 57899999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCCCCcccHHHHHhhHHhhhhhhhhHHHHH
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALR 407 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~~~~~~~~~~~~lk~~~~~s~l~~~~l~ 407 (577)
..+...+....|+.++..+.+||..||..||.+|+|+.++|+|||++........+........++++...+++++..+.
T Consensus 251 ~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (382)
T KOG0032|consen 251 LRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIGEATNIPLDISVLSRSKQFLSMSKLKKLALR 330 (382)
T ss_pred HcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCCcccccccccchhhhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999876666666666666666677666666665544
Q ss_pred hhccccchHHHhhhccccccccCCCC
Q 008127 408 ALASTLDDEELADLRDQFDAIDVDKN 433 (577)
Q Consensus 408 ~~~~~~~~~~~~~l~~~F~~~D~d~d 433 (577)
......+ +..++..|..+|.+.+
T Consensus 331 ~~~~~~~---~~~~~~~~~~~~~~~~ 353 (382)
T KOG0032|consen 331 VLAESLS---ISGLKEMFKLMDTDNN 353 (382)
T ss_pred HHhhhhh---HHHHHHHHHhhccccc
Confidence 4444444 7778888999998887
No 6
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1e-55 Score=409.01 Aligned_cols=254 Identities=31% Similarity=0.581 Sum_probs=235.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|++++.||.|+||.|.+++++.+|..+|+|++.+.+...-...+...+|..+|+.+. ||+++++++.|.+.+.+|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~-~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS-HPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc-CceeEEEEEeeccCCeEEEE
Confidence 36899999999999999999999999999999999888777778889999999999995 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++||.|+.++.+ .++|++..++.++.||+.||+|||+++|++|||||+|||++ .+|+
T Consensus 123 meyv~GGElFS~Lrk-----------------~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD---~~G~ 182 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRK-----------------SGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLD---QNGH 182 (355)
T ss_pred EeccCCccHHHHHHh-----------------cCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeec---cCCc
Confidence 999999999887754 48999999999999999999999999999999999999999 5899
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+||+|||+|+..... ..+.||||.|+|||++..+ ++.++|+|||||++|||+.|.+||.+.++..++.+|+.+...+
T Consensus 183 iKitDFGFAK~v~~r--T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~f 260 (355)
T KOG0616|consen 183 IKITDFGFAKRVSGR--TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKF 260 (355)
T ss_pred EEEEeccceEEecCc--EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccC
Confidence 999999999987643 5678999999999988765 5889999999999999999999999999999999999999888
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
+. .+++++++||+++|+.|-.+|. ...+|..||||+..
T Consensus 261 P~----~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v 303 (355)
T KOG0616|consen 261 PS----YFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGV 303 (355)
T ss_pred Cc----ccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccc
Confidence 74 5789999999999999999994 57799999999964
No 7
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-55 Score=419.97 Aligned_cols=256 Identities=30% Similarity=0.447 Sum_probs=224.8
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC-eEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-YVYIA 175 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-~~~lv 175 (577)
+.+.+..||+|+.|+||+|+++.|++.+|+|+|... ..+...+++.+|+++++.. +||+||++|+.|..++ .++|+
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~-~spyIV~~ygaF~~~~~~isI~ 156 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN--IDPALQKQILRELEILRSC-QSPYIVGFYGAFYSNGEEISIC 156 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc--CCHHHHHHHHHHHHHHhhC-CCCCeeeEeEEEEeCCceEEee
Confidence 567788999999999999999999999999999443 2356778899999999999 6999999999999988 59999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||.+|+|.+.+... ++++|.....++.+|++||.|||. ++||||||||+|||+++ .+
T Consensus 157 mEYMDgGSLd~~~k~~-----------------g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNs---kG 216 (364)
T KOG0581|consen 157 MEYMDGGSLDDILKRV-----------------GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNS---KG 216 (364)
T ss_pred hhhcCCCCHHHHHhhc-----------------CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeecc---CC
Confidence 9999999998876533 779999999999999999999996 99999999999999995 78
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCC-----ChhHHHHHHH
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDK-----TEDGIFKEVL 328 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~-----~~~~~~~~i~ 328 (577)
.|||||||.++.+... ...+++||..|||||.+.+ .|+.++||||||++++||++|+.||... ...+++..|.
T Consensus 217 eVKicDFGVS~~lvnS-~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv 295 (364)
T KOG0581|consen 217 EVKICDFGVSGILVNS-IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIV 295 (364)
T ss_pred CEEeccccccHHhhhh-hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHh
Confidence 8999999999887655 5578999999999999886 6799999999999999999999999774 5566777777
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.+.+.-... ..+|+++++||..||++||.+|||+.++++|||++....
T Consensus 296 ~~ppP~lP~--~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 296 DEPPPRLPE--GEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFED 343 (364)
T ss_pred cCCCCCCCc--ccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence 754322211 248999999999999999999999999999999997654
No 8
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-55 Score=437.87 Aligned_cols=258 Identities=36% Similarity=0.658 Sum_probs=236.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|.+++.||+|+|++|++|+++.+++.||||++.+.-...+.-...+.+|-.+|.+|.+||.|++||-.|+++..+|+|
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv 152 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV 152 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence 47999999999999999999999999999999998876666666778899999999998999999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
+||+++|+|+++|.+. +.|.+..++.++.+|+.||+|||++|||||||||+||||+ .+++
T Consensus 153 Le~A~nGdll~~i~K~-----------------Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd---~dmh 212 (604)
T KOG0592|consen 153 LEYAPNGDLLDLIKKY-----------------GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLD---KDGH 212 (604)
T ss_pred EEecCCCcHHHHHHHh-----------------CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEc---CCCc
Confidence 9999999999988644 8899999999999999999999999999999999999999 5899
Q ss_pred eeEEecCCCcccCCCCC--------------ccccccCCccccchhcccCC-CCCCchhhHHHHHHHHHhCCCCCCCCCh
Q 008127 256 LKATDFGLSDFIKPGKK--------------FQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE 320 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~--------------~~~~~gt~~y~aPE~~~~~~-~~~~DiwSlG~il~el~tg~~Pf~~~~~ 320 (577)
+||+|||.|+.+.+... ...++||..|.+||+|...+ ++.+|||+||||||.|+.|.+||.+.++
T Consensus 213 ikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne 292 (604)
T KOG0592|consen 213 IKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE 292 (604)
T ss_pred EEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH
Confidence 99999999987653211 14589999999999998776 8899999999999999999999999999
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
--++++|+.-...|+ +++++.+.+||+++|..||.+|+|+.+|.+||||....
T Consensus 293 yliFqkI~~l~y~fp----~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vd 345 (604)
T KOG0592|consen 293 YLIFQKIQALDYEFP----EGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVD 345 (604)
T ss_pred HHHHHHHHHhcccCC----CCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCC
Confidence 999999999777666 56889999999999999999999999999999998754
No 9
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=4.6e-55 Score=435.35 Aligned_cols=260 Identities=32% Similarity=0.575 Sum_probs=234.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||.||+|+.+.||..+|+|++.++.+......+.++.|.++|... ++|+||++|-.|++..++|||
T Consensus 141 ~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~-ds~~vVKLyYsFQD~~~LYLi 219 (550)
T KOG0605|consen 141 DDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV-DSPWVVKLYYSFQDKEYLYLI 219 (550)
T ss_pred ccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc-CCCcEEEEEEEecCCCeeEEE
Confidence 5799999999999999999999999999999999999988888899999999999985 799999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+|||++...|... ..|++..++.++.+++.|++.||..|+|||||||+|+||+ ..|+
T Consensus 220 MEylPGGD~mTLL~~~-----------------~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD---~~GH 279 (550)
T KOG0605|consen 220 MEYLPGGDMMTLLMRK-----------------DTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLID---AKGH 279 (550)
T ss_pred EEecCCccHHHHHHhc-----------------CcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeec---CCCC
Confidence 9999999999877644 8899999999999999999999999999999999999999 5899
Q ss_pred eeEEecCCCcccCC----------------------C--C-----C-------------------ccccccCCccccchh
Q 008127 256 LKATDFGLSDFIKP----------------------G--K-----K-------------------FQDIVGSAYYVAPEV 287 (577)
Q Consensus 256 vkl~DFGla~~~~~----------------------~--~-----~-------------------~~~~~gt~~y~aPE~ 287 (577)
+||+||||+..+.. . . . ....+|||.|||||+
T Consensus 280 iKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEV 359 (550)
T KOG0605|consen 280 IKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEV 359 (550)
T ss_pred EeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHH
Confidence 99999999853210 0 0 0 012479999999999
Q ss_pred cccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCC---C
Q 008127 288 LKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL---T 363 (577)
Q Consensus 288 ~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp---t 363 (577)
+.++ |+..+|+||||||+|||+.|.+||.+.++.+.+++|+.....+..+.-..++++++|||.+||+ ||.+|. .
T Consensus 360 ll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G 438 (550)
T KOG0605|consen 360 LLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKG 438 (550)
T ss_pred HhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCccc
Confidence 8764 6999999999999999999999999999999999999988766666667789999999999999 999998 4
Q ss_pred HHHHhcCccccccC
Q 008127 364 AAQALSHPWVREGG 377 (577)
Q Consensus 364 ~~~il~hp~f~~~~ 377 (577)
++||.+||||+...
T Consensus 439 ~~EIK~HPfF~~v~ 452 (550)
T KOG0605|consen 439 AEEIKKHPFFKGVD 452 (550)
T ss_pred HHHHhcCCccccCC
Confidence 99999999999753
No 10
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-54 Score=417.20 Aligned_cols=262 Identities=31% Similarity=0.603 Sum_probs=235.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|.+.+.||+|+||+||+|+++.++..||||.|.+... .....+.+..|+.+|+.+. |||||.+++++..++++|+|
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~-H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELK-HPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcC-CcceeeEEEEEecCCeEEEE
Confidence 479999999999999999999999999999999988765 3567788999999999995 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC--
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED-- 253 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~-- 253 (577)
||||.||+|.+++... +.+++..++.++.||+.||.+||+++||||||||.||||+....+
T Consensus 88 MEyC~gGDLs~yi~~~-----------------~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~ 150 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRR-----------------GRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDT 150 (429)
T ss_pred EEeCCCCCHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCC
Confidence 9999999999988654 789999999999999999999999999999999999999964223
Q ss_pred -CCeeEEecCCCcccCCCCCccccccCCccccchhc-ccCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 254 -SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 254 -~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
..+||+|||+|+.+.++....+.||+|.|||||++ .++|+.|+|+||+|+|+|+|++|++||...+..+++..+..+.
T Consensus 151 ~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~ 230 (429)
T KOG0595|consen 151 SPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGN 230 (429)
T ss_pred CceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccc
Confidence 68999999999999988888899999999999998 6789999999999999999999999999999999988776655
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
...+.. ...+++.+.+|+...|..+|.+|.+..+-+.|+++....
T Consensus 231 ~~~~~~-~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 231 EIVPVL-PAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred cccCch-hhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 433322 234667788999999999999999999999999988654
No 11
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.4e-54 Score=436.97 Aligned_cols=257 Identities=33% Similarity=0.624 Sum_probs=237.9
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
-|++++.||.|+-|.|.+|++..||+.+|||+|.+...........+.+||-||+-+ .|||++.+|++|+...++|+|.
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi-~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLI-EHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHh-cCCCeeeeeeeeccCceEEEEE
Confidence 589999999999999999999999999999999887544455677899999999988 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++||.|++++..+ +++++.+++.+++||+.|+.|||..+|+||||||+|+||+. .++|
T Consensus 92 Eyv~gGELFdylv~k-----------------G~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~---~~nI 151 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRK-----------------GPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDV---KNNI 151 (786)
T ss_pred EecCCchhHHHHHhh-----------------CCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhc---ccCE
Confidence 999999999988755 89999999999999999999999999999999999999994 5569
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhcccCC--CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
||+|||+|..-.++.-..+.||+|.|.|||++.|.. +.++||||+|||||.|+||+.||.+.+...++.++.++...+
T Consensus 152 KIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~M 231 (786)
T KOG0588|consen 152 KIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEM 231 (786)
T ss_pred eeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccC
Confidence 999999999888888889999999999999998764 889999999999999999999999999999999999988766
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
+ ..+|.++++||.+||..||++|+|..+|++|||+.....
T Consensus 232 P----s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~ 271 (786)
T KOG0588|consen 232 P----SNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTS 271 (786)
T ss_pred C----CcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCC
Confidence 6 569999999999999999999999999999999987654
No 12
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=9.3e-55 Score=403.27 Aligned_cols=258 Identities=29% Similarity=0.531 Sum_probs=221.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
+.|+.+.++|+|+||.||+|+++.||+.||||++..+.. .+...+-..+||++|++|. |||+|.++++|.....+++|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esed-d~~VkKIAlREIrmLKqLk-H~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESED-DPVVKKIALREIRMLKQLK-HENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCc-cHHHHHHHHHHHHHHHhcc-cchHHHHHHHHHhcceeEEE
Confidence 368888999999999999999999999999999865432 3445566789999999995 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
+|||+. ++++.|... ...++++.+..+++|++.|+.|||++++|||||||+|||++ .++.
T Consensus 80 FE~~dh-TvL~eLe~~----------------p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit---~~gv 139 (396)
T KOG0593|consen 80 FEYCDH-TVLHELERY----------------PNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILIT---QNGV 139 (396)
T ss_pred eeecch-HHHHHHHhc----------------cCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEe---cCCc
Confidence 999964 566655432 35688999999999999999999999999999999999999 5899
Q ss_pred eeEEecCCCcccC-CCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh---
Q 008127 256 LKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--- 329 (577)
Q Consensus 256 vkl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~--- 329 (577)
+||||||+|+.+. ++..++.++.|.||+|||.+.| +|++++||||+||++.||++|.+.|.+.+.-+.+..|..
T Consensus 140 vKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG 219 (396)
T KOG0593|consen 140 VKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLG 219 (396)
T ss_pred EEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHc
Confidence 9999999999887 7888999999999999998876 689999999999999999999999999887766655432
Q ss_pred -----------CCCCCC-------------CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 330 -----------NKPDFR-------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 330 -----------~~~~~~-------------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
..+-|. ...+|.++.-+.+|+++||+.||.+|++.+++|.||||..
T Consensus 220 ~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 220 NLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred ccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence 221111 1124567888999999999999999999999999999954
No 13
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-53 Score=429.34 Aligned_cols=259 Identities=38% Similarity=0.717 Sum_probs=231.9
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCc--hhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL--PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~--~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
....|.+++.||+|+||+|+.|.+..+|..||||++.+..... ....+.+.+|+.+++++..||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 3457999999999999999999999999999999877652211 12355677999999999779999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+|||||.||+|++++.. .++++|..++.++.||+.|++|||++||+||||||+|||++.
T Consensus 95 ~~ivmEy~~gGdL~~~i~~-----------------~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~-- 155 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN-----------------KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDG-- 155 (370)
T ss_pred EEEEEEecCCccHHHHHHH-----------------cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecC--
Confidence 9999999999999998854 388999999999999999999999999999999999999994
Q ss_pred CC-CCeeEEecCCCccc-CCCCCccccccCCccccchhcccC--C-CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 252 ED-SSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVLKRK--S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 252 ~~-~~vkl~DFGla~~~-~~~~~~~~~~gt~~y~aPE~~~~~--~-~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
+ +++||+|||++... .......+.|||+.|+|||++.+. | +.++||||+||+||.|++|+.||.+.+...++..
T Consensus 156 -~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~k 234 (370)
T KOG0583|consen 156 -NEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRK 234 (370)
T ss_pred -CCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHH
Confidence 4 89999999999988 456677899999999999999874 4 6899999999999999999999999999999999
Q ss_pred HHhCCCCCCCCCCCCC-CHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 327 VLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~-s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
|..+...++. .+ |+++.+|+.+||..||.+|+|+.+++.||||+..
T Consensus 235 i~~~~~~~p~----~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~~ 281 (370)
T KOG0583|consen 235 IRKGEFKIPS----YLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQKE 281 (370)
T ss_pred HhcCCccCCC----CcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhccC
Confidence 8888766654 34 9999999999999999999999999999999973
No 14
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-54 Score=396.85 Aligned_cols=266 Identities=32% Similarity=0.620 Sum_probs=242.5
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEeccccc-----CchhhHHHHHHHHHHHHHhcCCCCeeEEEEEE
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM-----ILPIAVEDVKREVKILQALAGHENVVKFYNAF 166 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-----~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~ 166 (577)
+.+-..|.-.+.||.|..+.|.++.++.+|..+|+|+|..... ......+.-.+|+.||+++.+||+|+++.++|
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 3445568888899999999999999999999999999854221 12234566789999999999999999999999
Q ss_pred EcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEE
Q 008127 167 EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 246 (577)
Q Consensus 167 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NIL 246 (577)
+.+..+++|+|+|+.|.|+|+|... -.+|+...+.|+.|+++|++|||.++||||||||+|||
T Consensus 93 es~sF~FlVFdl~prGELFDyLts~-----------------VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENIL 155 (411)
T KOG0599|consen 93 ESDAFVFLVFDLMPRGELFDYLTSK-----------------VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENIL 155 (411)
T ss_pred cCcchhhhhhhhcccchHHHHhhhh-----------------eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhhee
Confidence 9999999999999999999988654 67899999999999999999999999999999999999
Q ss_pred eecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-------CCCCCCchhhHHHHHHHHHhCCCCCCCCC
Q 008127 247 FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-------KSGPESDVWSIGVITYILLCGRRPFWDKT 319 (577)
Q Consensus 247 l~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~DiwSlG~il~el~tg~~Pf~~~~ 319 (577)
++ ++.++||+|||+|+.+.+++.....||||+|+|||.+.. +|+..+|+||+|||+|-|+.|.+|||...
T Consensus 156 ld---dn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk 232 (411)
T KOG0599|consen 156 LD---DNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK 232 (411)
T ss_pred ec---cccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH
Confidence 98 588999999999999999999999999999999998753 45788999999999999999999999999
Q ss_pred hhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 320 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 320 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
..-+++.|+.++..|..+.|.++|..+++||.+||+.||.+|+|++++|.||||....
T Consensus 233 QmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~ 290 (411)
T KOG0599|consen 233 QMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIA 290 (411)
T ss_pred HHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999997643
No 15
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-54 Score=419.81 Aligned_cols=263 Identities=32% Similarity=0.530 Sum_probs=225.9
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC-e
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-Y 171 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-~ 171 (577)
.+.++|.++++||.|+||.||+|+.+.+|..||||.+++.-...+ .-.-.||+..|++|..|||||++.+++.+.+ .
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~e--e~~nLREvksL~kln~hpniikL~Evi~d~~~~ 84 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWE--ECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRI 84 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHH--HHHHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence 355789999999999999999999999999999999876543211 2223689999999955999999999999877 9
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+|||||. .+|++.+.. ++..|++..++.|+.||+.||+|+|.+|+.||||||+|||+..
T Consensus 85 L~fVfE~Md-~NLYqLmK~----------------R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~-- 145 (538)
T KOG0661|consen 85 LYFVFEFMD-CNLYQLMKD----------------RNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISG-- 145 (538)
T ss_pred EeeeHHhhh-hhHHHHHhh----------------cCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecc--
Confidence 999999994 588876643 3688999999999999999999999999999999999999983
Q ss_pred CCCCeeEEecCCCcccCCCCCccccccCCccccchhcc--cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 252 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
+..|||+|||+|+.+.....++.++.|.||+|||++. +-|+.+.||||+|||++|+++-++.|.|.++-+.+.+|..
T Consensus 146 -~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~ 224 (538)
T KOG0661|consen 146 -NDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICE 224 (538)
T ss_pred -cceeEecccccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHH
Confidence 7889999999999999888999999999999999875 4568999999999999999999999999998887777653
Q ss_pred C--CC-----------------CCCC-------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 330 N--KP-----------------DFRR-------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 330 ~--~~-----------------~~~~-------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
- .+ .++. ...+..+.++.++|.+||.+||.+||||.++|+||||+...
T Consensus 225 VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~ 298 (538)
T KOG0661|consen 225 VLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR 298 (538)
T ss_pred HhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence 1 11 1111 11345788999999999999999999999999999999754
No 16
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-51 Score=422.23 Aligned_cols=257 Identities=26% Similarity=0.489 Sum_probs=236.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|.++++||+|+||+|+++..+.+++.||||++++.........+....|.+|+.....||.++.++..|+..+++|+|
T Consensus 368 ~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fv 447 (694)
T KOG0694|consen 368 DDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFV 447 (694)
T ss_pred cceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEE
Confidence 57999999999999999999999999999999999988887788999999999999887899999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+.||++.. .+....|++..++.|+..|+.||.|||++||||||||.+||||+ ..|+
T Consensus 448 mey~~Ggdm~~------------------~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD---~eGh 506 (694)
T KOG0694|consen 448 MEYVAGGDLMH------------------HIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLD---TEGH 506 (694)
T ss_pred EEecCCCcEEE------------------EEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEc---ccCc
Confidence 99999999543 23457899999999999999999999999999999999999999 5899
Q ss_pred eeEEecCCCcccC-CCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
|||+|||+++... .+....++||||.|||||++.+ .|+.++|+|||||+||||+.|..||.+.++++++..|+...+.
T Consensus 507 ~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~ 586 (694)
T KOG0694|consen 507 VKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVR 586 (694)
T ss_pred EEecccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCC
Confidence 9999999998654 5567789999999999999875 5799999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCccccccC
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREGG 377 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~~ 377 (577)
++. .+|.++.++|+++|.++|++|.. +.+|..||||+...
T Consensus 587 yP~----~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~ 631 (694)
T KOG0694|consen 587 YPR----FLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSID 631 (694)
T ss_pred CCC----cccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCC
Confidence 764 48999999999999999999995 58999999999853
No 17
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-51 Score=406.32 Aligned_cols=262 Identities=28% Similarity=0.465 Sum_probs=224.7
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC--Ce
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NY 171 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~ 171 (577)
....|+.+++||+|+||.||+|++..||+.||+|++...... +....-..+||.||++| +||||++|.+...+. +.
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~-~~~~~t~~REI~ILr~l-~HpNIikL~eivt~~~~~s 192 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEK-EGFPITAIREIKILRRL-DHPNIIKLEEIVTSKLSGS 192 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCC-CcchHHHHHHHHHHHhc-CCCcccceeeEEEecCCce
Confidence 445799999999999999999999999999999999876543 33455678999999999 699999999988765 78
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|||+|||+. +|...+. ...-.|++.++..++.||+.||+|||.+||+|||||.+||||+
T Consensus 193 iYlVFeYMdh-DL~GLl~----------------~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLid--- 252 (560)
T KOG0600|consen 193 IYLVFEYMDH-DLSGLLS----------------SPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILID--- 252 (560)
T ss_pred EEEEEecccc-hhhhhhc----------------CCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEc---
Confidence 9999999965 6665442 2346799999999999999999999999999999999999999
Q ss_pred CCCCeeEEecCCCcccCCCC--CccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
+++.+||+|||||+++.... .++..+-|.||+|||++.| .|+.++|+||.||||.||++|++.|.+.++-+.+..|
T Consensus 253 n~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kI 332 (560)
T KOG0600|consen 253 NNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKI 332 (560)
T ss_pred CCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHH
Confidence 58999999999999776543 4678899999999999876 5799999999999999999999999999999999988
Q ss_pred HhCCCCCCCCCCC-------------------------CCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 328 LRNKPDFRRKPWP-------------------------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 328 ~~~~~~~~~~~~~-------------------------~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.+-........|+ .++..+.+|+..||..||.+|.||.++|+|+||+...
T Consensus 333 fklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p 407 (560)
T KOG0600|consen 333 FKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEP 407 (560)
T ss_pred HHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCC
Confidence 7643332222232 3677889999999999999999999999999996543
No 18
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.6e-51 Score=397.46 Aligned_cols=261 Identities=31% Similarity=0.556 Sum_probs=234.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
+.|++++.||.|.-|+||+|..+.++..+|+|++.+..+.......++..|.+||..+ +||.++.||..|+.+.+.|+|
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l-DHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLL-DHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc-CCCccchhhheeeccceeEEE
Confidence 3689999999999999999999999999999999998776666777888999999999 799999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.....++ ....|++..++.++.+++.||+|||..|||+|||||+||||. ++|+
T Consensus 156 meyCpGGdL~~LrqkQ---------------p~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvr---edGH 217 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQ---------------PGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVR---EDGH 217 (459)
T ss_pred EecCCCccHHHHHhhC---------------CCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEe---cCCc
Confidence 9999999998755433 678899999999999999999999999999999999999998 6999
Q ss_pred eeEEecCCCcccC----------------------------------C-C----------------------CCcccccc
Q 008127 256 LKATDFGLSDFIK----------------------------------P-G----------------------KKFQDIVG 278 (577)
Q Consensus 256 vkl~DFGla~~~~----------------------------------~-~----------------------~~~~~~~g 278 (577)
|.|+||.|+.... . . .....++|
T Consensus 218 IMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVG 297 (459)
T KOG0610|consen 218 IMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVG 297 (459)
T ss_pred EEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccc
Confidence 9999999874210 0 0 01123689
Q ss_pred CCccccchhcccCC-CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccC
Q 008127 279 SAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 357 (577)
Q Consensus 279 t~~y~aPE~~~~~~-~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~d 357 (577)
|-.|.|||++.|.. +.++|||+|||++|||++|..||.+.+..+.+.+|+...+.|+.. +.++..++|||+++|.+|
T Consensus 298 ThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~--~~vs~~akDLIr~LLvKd 375 (459)
T KOG0610|consen 298 THEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEE--PEVSSAAKDLIRKLLVKD 375 (459)
T ss_pred ccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCC--CcchhHHHHHHHHHhccC
Confidence 99999999999865 899999999999999999999999999999999999999888776 378899999999999999
Q ss_pred cCCCCC----HHHHhcCccccccC
Q 008127 358 PRARLT----AAQALSHPWVREGG 377 (577)
Q Consensus 358 P~~Rpt----~~~il~hp~f~~~~ 377 (577)
|.+|+. |.||.+||||+...
T Consensus 376 P~kRlg~~rGA~eIK~HpFF~gVn 399 (459)
T KOG0610|consen 376 PSKRLGSKRGAAEIKRHPFFEGVN 399 (459)
T ss_pred hhhhhccccchHHhhcCccccCCC
Confidence 999998 99999999999854
No 19
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=3.3e-51 Score=373.68 Aligned_cols=260 Identities=31% Similarity=0.493 Sum_probs=222.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|..++.||+|.||.||+|++..||+.||||+|........ ......+||.+|+.+. ||||+.++++|...+.+.||
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdG-i~~talREIK~Lqel~-h~nIi~LiD~F~~~~~l~lV 79 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDG-INRTALREIKLLQELK-HPNIIELIDVFPHKSNLSLV 79 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccC-ccHHHHHHHHHHHHcc-CcchhhhhhhccCCCceEEE
Confidence 478899999999999999999999999999999987654322 2345679999999995 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
+||++. +|...+..+ ...++..++..++.+++.||+|||++.|+||||||.|+|++ .++.
T Consensus 80 fEfm~t-dLe~vIkd~----------------~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis---~~g~ 139 (318)
T KOG0659|consen 80 FEFMPT-DLEVVIKDK----------------NIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLIS---SDGQ 139 (318)
T ss_pred EEeccc-cHHHHhccc----------------ccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEc---CCCc
Confidence 999964 787766543 46799999999999999999999999999999999999998 4899
Q ss_pred eeEEecCCCcccCCCCC-ccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 256 LKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+||+|||+|+.+.+... ....+-|.+|+|||.+-| .|+..+||||.|||+.||+.|.+-|.+.+.-+.+..|++.-.
T Consensus 140 lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LG 219 (318)
T KOG0659|consen 140 LKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALG 219 (318)
T ss_pred EEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcC
Confidence 99999999998765433 344589999999998865 579999999999999999999999999998888888776433
Q ss_pred CCCCCCC------------------------CCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 333 DFRRKPW------------------------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 333 ~~~~~~~------------------------~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
......| +..+.++.+|+.+||..||.+|+|+.|+|+|+||+...
T Consensus 220 TP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P 288 (318)
T KOG0659|consen 220 TPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLP 288 (318)
T ss_pred CCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCC
Confidence 3222333 33566789999999999999999999999999999744
No 20
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3e-51 Score=400.93 Aligned_cols=261 Identities=34% Similarity=0.638 Sum_probs=225.6
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCch-----------hhHHHHHHHHHHHHHhcCCCCeeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP-----------IAVEDVKREVKILQALAGHENVVKF 162 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~-----------~~~~~~~~E~~~l~~l~~hpniv~~ 162 (577)
.-+.|++++.||+|.||.|-+|++..+++.||||++.+...... ...+.+.+||.||++| +|||||+|
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl-~H~nVV~L 173 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKL-HHPNVVKL 173 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhc-CCcCeeEE
Confidence 34579999999999999999999999999999999976543211 1236899999999999 59999999
Q ss_pred EEEEEc--CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCC-CCHHHHHHHHHHHHHHHHHHHhcCceecc
Q 008127 163 YNAFED--DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR-YTEKDAAVVVRQMLRVAAECHLHGLVHRD 239 (577)
Q Consensus 163 ~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~i~~qil~~l~~LH~~~iiHrD 239 (577)
+++..+ .+.+|||+|||..|.+... ..... +++.+++.|+.+++.||+|||.+||||||
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~------------------p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRD 235 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWC------------------PPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRD 235 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccC------------------CCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccc
Confidence 999986 4679999999999987541 23344 99999999999999999999999999999
Q ss_pred CCCCcEEeecCCCCCCeeEEecCCCcccCCC------CCccccccCCccccchhccc---CC--CCCCchhhHHHHHHHH
Q 008127 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPG------KKFQDIVGSAYYVAPEVLKR---KS--GPESDVWSIGVITYIL 308 (577)
Q Consensus 240 lKp~NILl~~~~~~~~vkl~DFGla~~~~~~------~~~~~~~gt~~y~aPE~~~~---~~--~~~~DiwSlG~il~el 308 (577)
|||+|+||+ .+++|||+|||.+.....+ ..+...+|||.|+|||++.+ .. +.+.||||+||+||+|
T Consensus 236 IKPsNLLl~---~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCl 312 (576)
T KOG0585|consen 236 IKPSNLLLS---SDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCL 312 (576)
T ss_pred cchhheEEc---CCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHh
Confidence 999999998 4799999999998765322 12345789999999998765 22 6789999999999999
Q ss_pred HhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 309 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 309 ~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
+.|+.||.+....+++.+|......++.. +.+.+.+++||++||++||++|+++.+|..|||....+.
T Consensus 313 lfG~~PF~~~~~~~l~~KIvn~pL~fP~~--pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~ 380 (576)
T KOG0585|consen 313 LFGQLPFFDDFELELFDKIVNDPLEFPEN--PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGD 380 (576)
T ss_pred hhccCCcccchHHHHHHHHhcCcccCCCc--ccccHHHHHHHHHHhhcChhheeehhhheecceeccCCC
Confidence 99999999999999999999988877764 467899999999999999999999999999999987643
No 21
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-52 Score=384.76 Aligned_cols=256 Identities=30% Similarity=0.533 Sum_probs=221.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEE-EEEcCCe-EE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYN-AFEDDNY-VY 173 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~-~~~~~~~-~~ 173 (577)
..|+|+++||.|+||+||++.+..+|..||.|.+.-..+ .....+....|+.+|++| +|||||++++ .|..++. ++
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~m-d~k~rq~~v~Ei~lLkQL-~HpNIVqYy~~~f~~~~evln 96 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMM-DAKARQDCVKEISLLKQL-NHPNIVQYYAHSFIEDNEVLN 96 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhc-cHHHHHHHHHHHHHHHhc-CCchHHHHHHHhhhccchhhH
Confidence 469999999999999999999999999999999985443 456788899999999999 5999999998 5655555 99
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh--cC--ceeccCCCCcEEeec
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL--HG--LVHRDMKPENFLFKS 249 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~--~~--iiHrDlKp~NILl~~ 249 (577)
||||||.+|+|...+.. +.+....+++..+|.++.|++.||..||+ .. |+||||||.||+|+
T Consensus 97 ivmE~c~~GDLsqmIk~-------------~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~- 162 (375)
T KOG0591|consen 97 IVMELCDAGDLSQMIKH-------------FKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLT- 162 (375)
T ss_pred HHHHhhcccCHHHHHHH-------------HHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEc-
Confidence 99999999999988753 23456889999999999999999999999 44 99999999999999
Q ss_pred CCCCCCeeEEecCCCcccCCCCCc-cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~-~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.++.|||+|||+++++.....+ .+.+|||.||+||++.+ .|+.++||||+||++|||+.-.+||.+.+-.++..+|
T Consensus 163 --~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI 240 (375)
T KOG0591|consen 163 --ANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKI 240 (375)
T ss_pred --CCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHH
Confidence 5899999999999998765544 57899999999998764 6799999999999999999999999999988888888
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
..+.. ++-+-...|..+..||..|+..||..||+. +|++...
T Consensus 241 ~qgd~--~~~p~~~YS~~l~~li~~ci~vd~~~RP~t-----~~~v~di 282 (375)
T KOG0591|consen 241 EQGDY--PPLPDEHYSTDLRELINMCIAVDPEQRPDT-----VPYVQDI 282 (375)
T ss_pred HcCCC--CCCcHHHhhhHHHHHHHHHccCCcccCCCc-----chHHHHH
Confidence 88743 222224578999999999999999999987 5665543
No 22
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-51 Score=371.17 Aligned_cols=257 Identities=32% Similarity=0.621 Sum_probs=235.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|.||.||+|+.++++-.||+|++.++..........+.+|++|-..|+ ||||+++|++|.+...+|++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~-hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLR-HPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccC-CccHHhhhhheeccceeEEE
Confidence 46999999999999999999999999999999999887666666788999999999995 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
+||.++|+|+..|... +..++++..++.++.|++.||.|+|..+||||||||+|+|++. .+.
T Consensus 101 lEya~~gel~k~L~~~---------------~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~---~~~ 162 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEG---------------RMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGS---AGE 162 (281)
T ss_pred EEecCCchHHHHHHhc---------------ccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCC---CCC
Confidence 9999999999877533 4578999999999999999999999999999999999999984 778
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcccCC-CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+||+|||.+.... .....+.|||..|.|||+..+.. +..+|+|++|++.||++.|.+||..++..+.++.|.+....+
T Consensus 163 lkiAdfGwsV~~p-~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~ 241 (281)
T KOG0580|consen 163 LKIADFGWSVHAP-SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKF 241 (281)
T ss_pred eeccCCCceeecC-CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccC
Confidence 9999999998765 45567889999999999998764 889999999999999999999999999999999999887766
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
+ +.++.++.|+|.+||.++|.+|.+..+++.|||+...
T Consensus 242 p----~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 242 P----STISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred C----cccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence 5 5789999999999999999999999999999998754
No 23
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2.6e-51 Score=407.99 Aligned_cols=255 Identities=29% Similarity=0.558 Sum_probs=230.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|.+.+.||+|+||.||+|+.+.|.+.||+|.+.+... .......+.+|++|++.|+ |||||.++++|+...++|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr-~~k~l~~l~~ev~i~r~lk-Hpniv~m~esfEt~~~~~vV 79 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR-NEKELKNLRQEVRILRSLK-HPNIVEMLESFETSAHLWVV 79 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCC-chHHHHHHHHHHHHHHhcC-CcchhhHHHhhcccceEEEE
Confidence 468899999999999999999999999999999987653 3456788999999999995 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
+|||.| +|...|.+ +..++|+.++.++.+++.||.|||+++|+|||+||.|||+. .+++
T Consensus 80 te~a~g-~L~~il~~-----------------d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~---~~~~ 138 (808)
T KOG0597|consen 80 TEYAVG-DLFTILEQ-----------------DGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLE---KGGT 138 (808)
T ss_pred ehhhhh-hHHHHHHh-----------------ccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeec---CCCc
Confidence 999976 99887754 48899999999999999999999999999999999999998 5899
Q ss_pred eeEEecCCCcccCCCCC-ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+|+||||+|+.+..+.. .....|||.|||||++.+. |+..+|+||||||+|||++|++||...+..++.+.|+.....
T Consensus 139 ~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~ 218 (808)
T KOG0597|consen 139 LKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVK 218 (808)
T ss_pred eeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCC
Confidence 99999999998765543 4567899999999998865 588999999999999999999999999999999999887665
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
++ +..|..+..|++.+|.+||.+|+|..+++.|||.+...
T Consensus 219 ~p----~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~ 258 (808)
T KOG0597|consen 219 PP----STASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKI 258 (808)
T ss_pred Cc----ccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhh
Confidence 44 46899999999999999999999999999999998743
No 24
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.2e-50 Score=377.86 Aligned_cols=260 Identities=28% Similarity=0.425 Sum_probs=218.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--CCeEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYVY 173 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~~ 173 (577)
+.|+.+..|++|+||.||+|+++.|++.||+|+++......... -...+||.+|.+++ |||||.+-++... -+.+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFP-ItsLREIniLl~~~-H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFP-ITSLREINILLKAR-HPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCc-chhHHHHHHHHhcC-CCCeeeeEEEEeccccceee
Confidence 46999999999999999999999999999999997665332222 23478999999995 9999999998864 35699
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
||||||+. +|...+.. -..+|+..+++.++.|++.||.|||.+.|+||||||+|+|++ ..
T Consensus 154 ~VMe~~Eh-DLksl~d~----------------m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~---~~ 213 (419)
T KOG0663|consen 154 IVMEYVEH-DLKSLMET----------------MKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLS---HK 213 (419)
T ss_pred eeHHHHHh-hHHHHHHh----------------ccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeec---cC
Confidence 99999964 66554432 136899999999999999999999999999999999999998 58
Q ss_pred CCeeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 254 SSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
|.+||+|||+|+.+... ..++..+-|.||+|||++.+ .|++++|+||+|||+.||+++++.|.+.++.+.+..|...
T Consensus 214 G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~l 293 (419)
T KOG0663|consen 214 GILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKL 293 (419)
T ss_pred CcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHH
Confidence 99999999999987654 45677899999999998876 4689999999999999999999999999999988888753
Q ss_pred CCCCCCCCCCC----------------------------CCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 331 KPDFRRKPWPS----------------------------ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 331 ~~~~~~~~~~~----------------------------~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
-.......||+ ++....+|+..+|.+||.+|.||.++|+|+||++..
T Consensus 294 lGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P 368 (419)
T KOG0663|consen 294 LGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETP 368 (419)
T ss_pred hCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCC
Confidence 22222222221 457788999999999999999999999999999854
No 25
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-49 Score=387.67 Aligned_cols=264 Identities=28% Similarity=0.478 Sum_probs=230.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
+.|++...||.|.-++||+|++..++..||||++...++.. ..+.+.+|+..|+.+ +||||++++..|..+..+|+|
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~--~ld~l~kE~~~msl~-~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN--DLDALRKEVQTMSLI-DHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh--hHHHHHHHHHHhhhc-CCCCcceEEEEEEecceeEEe
Confidence 47999999999999999999999999999999998877643 478999999999888 699999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|.||.+|++++.+.... ...++|..++.|+++++.||.|||.+|.||||||+.||||+ .+|.
T Consensus 103 mpfMa~GS~ldIik~~~---------------~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~---~dG~ 164 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYY---------------PDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILID---SDGT 164 (516)
T ss_pred ehhhcCCcHHHHHHHHc---------------cccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEc---CCCc
Confidence 99999999999886542 24589999999999999999999999999999999999999 4899
Q ss_pred eeEEecCCCcccCCC-C----CccccccCCccccchhcc---cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 256 LKATDFGLSDFIKPG-K----KFQDIVGSAYYVAPEVLK---RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~----~~~~~~gt~~y~aPE~~~---~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
|||+|||.+..+... . ++++++||++|||||++. .+|+.|+||||||++.+||++|..||....+..++...
T Consensus 165 VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~t 244 (516)
T KOG0582|consen 165 VKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLT 244 (516)
T ss_pred EEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHH
Confidence 999999987654332 2 135679999999999964 46899999999999999999999999999998888888
Q ss_pred HhCCCCCC------CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCC
Q 008127 328 LRNKPDFR------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 380 (577)
Q Consensus 328 ~~~~~~~~------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~ 380 (577)
+.+.+..+ ......++..++.+|..||.+||.+||||+++|+|+||+......
T Consensus 245 Lqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~~~ 303 (516)
T KOG0582|consen 245 LQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKSKE 303 (516)
T ss_pred hcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccchh
Confidence 88776422 222234677899999999999999999999999999999865543
No 26
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-50 Score=403.92 Aligned_cols=260 Identities=31% Similarity=0.544 Sum_probs=225.9
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
.+....|....+||+|+.|.||.|+...+++.||||++..... ...+-+.+|+.+|+.+. |||||.+++.|...+.
T Consensus 269 ~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q---~~keLilnEi~Vm~~~~-H~NiVnfl~Sylv~de 344 (550)
T KOG0578|consen 269 GDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQ---PKKELLLNEILVMRDLH-HPNIVNFLDSYLVGDE 344 (550)
T ss_pred CChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccC---CchhhhHHHHHHHHhcc-chHHHHHHHHhcccce
Confidence 4455679999999999999999999999999999999987653 24566899999999995 9999999999998899
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+||||++||+|.|.+. ...++|.+++.|+.+++.||+|||.+||||||||.+|||++
T Consensus 345 LWVVMEym~ggsLTDvVt------------------~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~--- 403 (550)
T KOG0578|consen 345 LWVVMEYMEGGSLTDVVT------------------KTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLT--- 403 (550)
T ss_pred eEEEEeecCCCchhhhhh------------------cccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEec---
Confidence 999999999999988663 34589999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCC-CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH-
Q 008127 252 EDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL- 328 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~- 328 (577)
.++.|||+|||++..+.... ...+.+|||.|||||+... .|++++||||||++++||+-|.+||...++-.-+..|.
T Consensus 404 ~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ 483 (550)
T KOG0578|consen 404 MDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT 483 (550)
T ss_pred cCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhh
Confidence 57889999999998776544 5567899999999998875 67999999999999999999999998766655444443
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.+.+.+. .+..+|+++++||.+||+.||.+|++|.++|+||||+....
T Consensus 484 ng~P~lk--~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~p 531 (550)
T KOG0578|consen 484 NGTPKLK--NPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAKP 531 (550)
T ss_pred cCCCCcC--CccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcCC
Confidence 3444433 34679999999999999999999999999999999965543
No 27
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-50 Score=388.17 Aligned_cols=256 Identities=32% Similarity=0.611 Sum_probs=237.2
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
...+|++.+.||+|.||+|-+|++...|+.||||.|.+......+..-.+++||+||..| +||||+.+|++|+..+.+.
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsL-NHPhII~IyEVFENkdKIv 129 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSL-NHPHIIQIYEVFENKDKIV 129 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhc-CCCceeehhhhhcCCceEE
Confidence 456899999999999999999999999999999999999888888889999999999999 6999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
|||||..+|+|+|++... +.|++.+++.++.||..|+.|||.++++|||||.+||||+ .+
T Consensus 130 ivMEYaS~GeLYDYiSer-----------------~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD---~N 189 (668)
T KOG0611|consen 130 IVMEYASGGELYDYISER-----------------GSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLD---QN 189 (668)
T ss_pred EEEEecCCccHHHHHHHh-----------------ccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeec---CC
Confidence 999999999999988544 8899999999999999999999999999999999999999 58
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccccchhcccCC--CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+++||+|||++..+....-.+++||+|.|.+||+++|.+ ++.+|-|||||+||.|+.|.+||.+.+...+.++|.++.
T Consensus 190 ~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~Ga 269 (668)
T KOG0611|consen 190 NNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGA 269 (668)
T ss_pred CCeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhccc
Confidence 899999999999998888889999999999999999875 789999999999999999999999999999999998875
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
..-+ .-+..+.-||+.||..||++|.|+.+|-.|=|+.-
T Consensus 270 YrEP-----~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvNw 308 (668)
T KOG0611|consen 270 YREP-----ETPSDASGLIRWMLMVNPERRATIEDIASHWWVNW 308 (668)
T ss_pred ccCC-----CCCchHHHHHHHHHhcCcccchhHHHHhhhheeec
Confidence 4322 34567889999999999999999999999999764
No 28
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-50 Score=382.47 Aligned_cols=268 Identities=32% Similarity=0.551 Sum_probs=222.1
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc----
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED---- 168 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~---- 168 (577)
.+..+|..++.||.|+||.|..|.++.+|+.||||++... +......+...+|+.+|+.++ |+||+.+++++..
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~-F~~~~~akRtlRElklLr~~~-HeNIi~l~di~~p~~~~ 96 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP-FENQIDAKRTLRELKLLRHLR-HENIIGLLDIFRPPSRD 96 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhh-hhchHHHHHHHHHHHHHHHhc-CCCcceEEeeccccccc
Confidence 3456787789999999999999999999999999998632 223456778899999999996 9999999999875
Q ss_pred -CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 169 -DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 169 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
-+.+|+|+|+| +-+|...+. .+..+++.++..+++||++||.|+|+.+|+||||||.|+|+
T Consensus 97 ~f~DvYiV~elM-etDL~~iik-----------------~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~ 158 (359)
T KOG0660|consen 97 KFNDVYLVFELM-ETDLHQIIK-----------------SQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLL 158 (359)
T ss_pred ccceeEEehhHH-hhHHHHHHH-----------------cCccccHHHHHHHHHHHHHhcchhhcccccccccchhheee
Confidence 35799999999 456665553 23559999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCC---CCCccccccCCccccchhcc--cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKP---GKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDG 322 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~---~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~ 322 (577)
+ .+..+||||||+|+.... ....+.++.|.+|+|||++. ..|+.++||||+|||+.||++|++.|.|.+.-.
T Consensus 159 n---~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~ 235 (359)
T KOG0660|consen 159 N---ADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVH 235 (359)
T ss_pred c---cCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHH
Confidence 8 478899999999998754 34457789999999999764 467899999999999999999999998877655
Q ss_pred HHHHHH-----------------------hCCCCCCCCC----CCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 323 IFKEVL-----------------------RNKPDFRRKP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 323 ~~~~i~-----------------------~~~~~~~~~~----~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
.+..|+ +..+..+..+ ++..++.+.+|+.+||..||.+|+|++|+|+||||..
T Consensus 236 Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~ 315 (359)
T KOG0660|consen 236 QLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAP 315 (359)
T ss_pred HHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhh
Confidence 444433 2233333322 4678999999999999999999999999999999998
Q ss_pred cCCCCCCc
Q 008127 376 GGDASEIP 383 (577)
Q Consensus 376 ~~~~~~~~ 383 (577)
.-.....|
T Consensus 316 ~hdp~dEP 323 (359)
T KOG0660|consen 316 YHDPEDEP 323 (359)
T ss_pred hcCCccCC
Confidence 76544433
No 29
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-50 Score=391.66 Aligned_cols=258 Identities=34% Similarity=0.570 Sum_probs=215.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC--eEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN--YVYI 174 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--~~~l 174 (577)
++..++.||+|+||.||++.+..+|..+|||.+..... + ..+.+.+|+.+|.+|+ |||||++++...... .++|
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~--~-~~~~l~~Ei~iL~~l~-~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDS--P-TSESLEREIRILSRLN-HPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccc--h-hHHHHHHHHHHHHhCC-CCCEEeeCCccccccCeeeEe
Confidence 57888999999999999999999999999999876532 1 2677999999999996 999999999755444 6999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
.|||+++|+|.+.+... ...+++..++.++.||++||.|||++|||||||||+|||++. .++
T Consensus 94 ~mEy~~~GsL~~~~~~~----------------g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~--~~~ 155 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRY----------------GGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDP--SNG 155 (313)
T ss_pred eeeccCCCcHHHHHHHc----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeC--CCC
Confidence 99999999999987544 127999999999999999999999999999999999999983 258
Q ss_pred CeeEEecCCCcccCC----CCCccccccCCccccchhcccCC--CCCCchhhHHHHHHHHHhCCCCCCC-CChhHHHHHH
Q 008127 255 SLKATDFGLSDFIKP----GKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEV 327 (577)
Q Consensus 255 ~vkl~DFGla~~~~~----~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwSlG~il~el~tg~~Pf~~-~~~~~~~~~i 327 (577)
.+||+|||++..... ........||+.|||||++.... ..++|||||||++.||+||++||.. ....+.+..+
T Consensus 156 ~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~i 235 (313)
T KOG0198|consen 156 DVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLI 235 (313)
T ss_pred eEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHH
Confidence 999999999987663 12234578999999999988543 3499999999999999999999987 3444444444
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.... ..+ .....+|.++++||.+|+..||++||||.++|.|||.+....
T Consensus 236 g~~~-~~P-~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 236 GRED-SLP-EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred hccC-CCC-CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 4443 112 333569999999999999999999999999999999987543
No 30
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-49 Score=388.95 Aligned_cols=266 Identities=32% Similarity=0.638 Sum_probs=242.6
Q ss_pred cccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 90 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
++..+..-|.+.+.||+|.|+.|-+|++.-||..||||+|.+.++. ......+.+|++.|+.++ |||||++|++....
T Consensus 12 ~DgkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD-~~st~hlfqEVRCMKLVQ-HpNiVRLYEViDTQ 89 (864)
T KOG4717|consen 12 YDGKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLD-TLSTGHLFQEVRCMKLVQ-HPNIVRLYEVIDTQ 89 (864)
T ss_pred cccceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccc-hhhhhHHHHHHHHHHHhc-CcCeeeeeehhccc
Confidence 3455667799999999999999999999999999999999998764 345677899999999885 99999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
..+|+|+|+-.+|+|+|+|+.. ...+.+..+..++.||+.|+.|||...+|||||||+|+.+-.
T Consensus 90 TKlyLiLELGD~GDl~DyImKH----------------e~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFE 153 (864)
T KOG4717|consen 90 TKLYLILELGDGGDLFDYIMKH----------------EEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFE 153 (864)
T ss_pred ceEEEEEEecCCchHHHHHHhh----------------hccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEee
Confidence 9999999999999999999765 477999999999999999999999999999999999999874
Q ss_pred CCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccC-C-CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
+-|.|||+|||++..+.++....+.||+..|.|||++.|. | .+++||||||||||.|++|++||+..+..+.+..|
T Consensus 154 --KlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmI 231 (864)
T KOG4717|consen 154 --KLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMI 231 (864)
T ss_pred --ecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhh
Confidence 6799999999999999999999999999999999988764 4 67899999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCC
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~ 379 (577)
+..+...+ ..+|.++++||..||..||++|.+.++|..|+|++.....
T Consensus 232 mDCKYtvP----shvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~ 279 (864)
T KOG4717|consen 232 MDCKYTVP----SHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRG 279 (864)
T ss_pred hcccccCc----hhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCCC
Confidence 98776655 4589999999999999999999999999999999986643
No 31
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=5.6e-48 Score=385.81 Aligned_cols=260 Identities=27% Similarity=0.430 Sum_probs=216.7
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
|++.+.||+|+||.||+|.+..+|+.||||.+.+...........+.+|+.++..+ +||||+++++++.+.+.+++|||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV-NSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhc-CCCcEEEEEEEEccCCeEEEEEE
Confidence 78899999999999999999999999999998765433333445678999999999 59999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
||++|+|.+.+... ....+++..+..++.||+.||.|||+.||+||||||+|||++ .++.+|
T Consensus 81 ~~~~g~L~~~~~~~---------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~---~~~~~k 142 (285)
T cd05631 81 IMNGGDLKFHIYNM---------------GNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLD---DRGHIR 142 (285)
T ss_pred ecCCCcHHHHHHhh---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC---CCCCEE
Confidence 99999998766432 234689999999999999999999999999999999999998 478899
Q ss_pred EEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008127 258 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336 (577)
Q Consensus 258 l~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~ 336 (577)
|+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+.........
T Consensus 143 l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 222 (285)
T cd05631 143 ISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQE 222 (285)
T ss_pred EeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccc
Confidence 999999987655444556689999999998865 5688999999999999999999999876553333332221111122
Q ss_pred CCCCCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCcccccc
Q 008127 337 KPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 376 (577)
Q Consensus 337 ~~~~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~ 376 (577)
.....+++++.+||.+||..||.+||+ ++++++||||+..
T Consensus 223 ~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05631 223 EYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNI 267 (285)
T ss_pred cCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCC
Confidence 223468899999999999999999997 8999999999874
No 32
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-49 Score=366.47 Aligned_cols=267 Identities=33% Similarity=0.629 Sum_probs=236.7
Q ss_pred cccceeee-eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc----
Q 008127 94 FDRRYTIG-KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED---- 168 (577)
Q Consensus 94 ~~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~---- 168 (577)
+.++|.+. ++||-|-.|+|..+.++.||+.+|+|++... ...++|+++.-....|||||.++++|+.
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~ 130 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQG 130 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccC
Confidence 55678876 4899999999999999999999999988533 3457888887777789999999999863
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
...+.+|||.++||+|+..+..+ ....|+|.++..|+.||..|+.|||+.+|.||||||+|+|..
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~---------------g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt 195 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDR---------------GDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYT 195 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHc---------------ccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeee
Confidence 56789999999999999988655 456799999999999999999999999999999999999999
Q ss_pred cCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCC----ChhHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDK----TEDGI 323 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~----~~~~~ 323 (577)
....+..+||+|||+|+.........+.|-||.|.|||++.. +|+..+|+||+||++|.|++|.+||+.. ....+
T Consensus 196 ~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgM 275 (400)
T KOG0604|consen 196 TTSPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 275 (400)
T ss_pred cCCCCcceEecccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhH
Confidence 877889999999999998776677788899999999999974 6788899999999999999999999764 34567
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCCCCc
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 383 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~~~~ 383 (577)
...|..+...|+.+.|..+|+.++++|+.+|..+|.+|.|+.+++.|||+.....-...+
T Consensus 276 k~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~tp 335 (400)
T KOG0604|consen 276 KRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQTP 335 (400)
T ss_pred HhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccCCCCC
Confidence 888999999999999999999999999999999999999999999999998765443333
No 33
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=4.1e-48 Score=394.62 Aligned_cols=254 Identities=31% Similarity=0.565 Sum_probs=222.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|++.+.||+|+||.||+|+++.+|+.||||++.+.........+.+.+|+.+++.+ +||||+++++++..++.+|+|
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL-SHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEcCCEEEEE
Confidence 4699999999999999999999999999999998765433334567789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||++|+|.+.+.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 97 ~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~---~~~~ 156 (329)
T PTZ00263 97 LEFVVGGELFTHLRK-----------------AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLD---NKGH 156 (329)
T ss_pred EcCCCCChHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEC---CCCC
Confidence 999999999887743 36789999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+||+|||++...... ....+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..+.+..+..+...+
T Consensus 157 ~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~ 234 (329)
T PTZ00263 157 VKVTDFGFAKKVPDR--TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKF 234 (329)
T ss_pred EEEeeccCceEcCCC--cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCC
Confidence 999999999866432 2346899999999988754 5889999999999999999999999888888888887765443
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCcccccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 376 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~ 376 (577)
+ ..++..+.+||.+||+.||.+||+ +.+++.||||+..
T Consensus 235 p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 235 P----NWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred C----CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 3 247889999999999999999997 7999999999863
No 34
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=3.1e-48 Score=388.81 Aligned_cols=253 Identities=28% Similarity=0.528 Sum_probs=221.9
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||+|+||.||+|.+..+|+.||||++...........+.+.+|+.+++.+ +||||+++++++.+.+.+|+||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEV-SHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhC-CCCcHhhhHhhhccCCeEEEEE
Confidence 689999999999999999999999999999998765432333456788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++|+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 81 e~~~~~~L~~~~~~-----------------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~---~~~~~ 140 (291)
T cd05612 81 EYVPGGELFSYLRN-----------------SGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLD---KEGHI 140 (291)
T ss_pred eCCCCCCHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCE
Confidence 99999999887743 36789999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~ 335 (577)
||+|||++...... ....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+.+..+......++
T Consensus 141 kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~ 218 (291)
T cd05612 141 KLTDFGFAKKLRDR--TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFP 218 (291)
T ss_pred EEEecCcchhccCC--cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCC
Confidence 99999999876432 2345799999999988754 58899999999999999999999999888888888887765544
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCcccccc
Q 008127 336 RKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 376 (577)
Q Consensus 336 ~~~~~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~ 376 (577)
..+++.+.+||++||+.||.+||+ +.++++||||+..
T Consensus 219 ----~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 260 (291)
T cd05612 219 ----RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSV 260 (291)
T ss_pred ----ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCC
Confidence 346889999999999999999995 9999999999763
No 35
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=8.7e-48 Score=397.71 Aligned_cols=259 Identities=27% Similarity=0.467 Sum_probs=219.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||.||+|.+..+++.||||++.+...........+.+|+.++..+ +||||+++++.+.+...+|+|
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~-~~~~iv~~~~~~~~~~~~~lv 79 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEA-DSLWVVKMFYSFQDKLNLYLI 79 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCeEEEE
Confidence 3689999999999999999999999999999999765433334556788999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 80 ~E~~~gg~L~~~l~~-----------------~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~---~~~~ 139 (363)
T cd05628 80 MEFLPGGDMMTLLMK-----------------KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLD---SKGH 139 (363)
T ss_pred EcCCCCCcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC---CCCC
Confidence 999999999887743 36789999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCC------------------------------------CccccccCCccccchhccc-CCCCCCch
Q 008127 256 LKATDFGLSDFIKPGK------------------------------------KFQDIVGSAYYVAPEVLKR-KSGPESDV 298 (577)
Q Consensus 256 vkl~DFGla~~~~~~~------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~Di 298 (577)
+||+|||+++...... .....+||+.|+|||++.+ .++.++||
T Consensus 140 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~Dv 219 (363)
T cd05628 140 VKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDW 219 (363)
T ss_pred EEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhh
Confidence 9999999987543211 0124589999999998865 46889999
Q ss_pred hhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcC---CCCCHHHHhcCccccc
Q 008127 299 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR---ARLTAAQALSHPWVRE 375 (577)
Q Consensus 299 wSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~---~Rpt~~~il~hp~f~~ 375 (577)
|||||++|+|++|+.||.+.+..+.+..+.........+....+++++.+||.+|+. +|. .||++.++++||||+.
T Consensus 220 wSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~ 298 (363)
T cd05628 220 WSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEG 298 (363)
T ss_pred hhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCC
Confidence 999999999999999999988888888887654433333334578999999999776 444 4589999999999986
Q ss_pred c
Q 008127 376 G 376 (577)
Q Consensus 376 ~ 376 (577)
.
T Consensus 299 ~ 299 (363)
T cd05628 299 V 299 (363)
T ss_pred C
Confidence 4
No 36
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=6.6e-48 Score=392.19 Aligned_cols=250 Identities=30% Similarity=0.537 Sum_probs=217.3
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|.++.+|+.||||++.+...........+.+|+.+++++ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNT-RHPFLTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence 3699999999999999999999999999765433334556788999999999 599999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|.+.+.. ...+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+||
T Consensus 80 ~~L~~~l~~-----------------~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~---~~~~~kl~Df 139 (323)
T cd05571 80 GELFFHLSR-----------------ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLD---KDGHIKITDF 139 (323)
T ss_pred CcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC---CCCCEEEeeC
Confidence 999887643 36789999999999999999999999999999999999998 4788999999
Q ss_pred CCCcccC-CCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008127 262 GLSDFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339 (577)
Q Consensus 262 Gla~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 339 (577)
|+++... ........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+.......+......++
T Consensus 140 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p---- 215 (323)
T cd05571 140 GLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP---- 215 (323)
T ss_pred CCCcccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC----
Confidence 9987542 2233445689999999999865 468999999999999999999999998888888777776655443
Q ss_pred CCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 340 PSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 340 ~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
..+++++.+||.+||..||++|| ++.++++||||+..
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~ 257 (323)
T cd05571 216 RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASI 257 (323)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 45789999999999999999999 89999999999864
No 37
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=5.3e-48 Score=395.40 Aligned_cols=263 Identities=31% Similarity=0.450 Sum_probs=220.3
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCC-----CCeeEEEEEE
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH-----ENVVKFYNAF 166 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~h-----pniv~~~~~~ 166 (577)
+.+..+|.|.+.||+|+||+|.+|.+..|++.||||+++... ....+...|+.+|..|..| -|||+++++|
T Consensus 182 d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k----~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F 257 (586)
T KOG0667|consen 182 DHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK----RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF 257 (586)
T ss_pred ceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh----HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc
Confidence 335558999999999999999999999999999999997664 3556677899999999623 4899999999
Q ss_pred EcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEE
Q 008127 167 EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 246 (577)
Q Consensus 167 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NIL 246 (577)
...+++|||+|++ .-+|+++++.+ +...|+...++.++.||+.||.+||+.+|||+||||||||
T Consensus 258 ~fr~HlciVfELL-~~NLYellK~n---------------~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENIL 321 (586)
T KOG0667|consen 258 YFRNHLCIVFELL-STNLYELLKNN---------------KFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENIL 321 (586)
T ss_pred ccccceeeeehhh-hhhHHHHHHhc---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhhee
Confidence 9999999999999 56999988765 5677999999999999999999999999999999999999
Q ss_pred eecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 247 FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 247 l~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
|...+ ...|||+|||+|++... ...+++.+..|+|||++.| .|+.++||||||||++||++|.+.|.+.++.+.+.
T Consensus 322 L~~~~-r~~vKVIDFGSSc~~~q--~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~ 398 (586)
T KOG0667|consen 322 LKDPK-RSRIKVIDFGSSCFESQ--RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLA 398 (586)
T ss_pred eccCC-cCceeEEecccccccCC--cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHH
Confidence 98754 45999999999998653 3348899999999998765 67999999999999999999999999999888777
Q ss_pred HHHhCC---------------------CCCCC--------------------------CCCC-C-----------CCHHH
Q 008127 326 EVLRNK---------------------PDFRR--------------------------KPWP-S-----------ISNSA 346 (577)
Q Consensus 326 ~i~~~~---------------------~~~~~--------------------------~~~~-~-----------~s~~~ 346 (577)
.|+.-- ..++. ...| . -...+
T Consensus 399 ~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F 478 (586)
T KOG0667|consen 399 RIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLF 478 (586)
T ss_pred HHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHH
Confidence 664300 00000 0001 0 11357
Q ss_pred HHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 347 KDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 347 ~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.+||++||.+||.+|+|+.++|+||||+...
T Consensus 479 ~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~ 509 (586)
T KOG0667|consen 479 IDFLKRCLEWDPAERITPAQALNHPFLTGTS 509 (586)
T ss_pred HHHHHHHhccCchhcCCHHHHhcCccccccc
Confidence 8999999999999999999999999999543
No 38
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-48 Score=372.17 Aligned_cols=260 Identities=30% Similarity=0.527 Sum_probs=219.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--CC---
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DN--- 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~--- 170 (577)
-.|.-.+++|+|+||.||+|....+++.||||++-..... -.+|+.+|+.+ +|||||++.-+|.. +.
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~-------knrEl~im~~l-~HpNIV~L~~~f~~~~~~d~~ 95 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY-------KNRELQIMRKL-DHPNIVRLLYFFSSSTESDEV 95 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc-------CcHHHHHHHhc-CCcCeeeEEEEEEecCCCchh
Confidence 3688899999999999999999999999999988654322 24799999988 69999999988863 22
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
++.+||||+|. +|...+... ...+..++.-.++.+++||++||.|||+.||+||||||.|+|++.
T Consensus 96 ~lnlVleymP~-tL~~~~r~~-------------~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~- 160 (364)
T KOG0658|consen 96 YLNLVLEYMPE-TLYRVIRHY-------------TRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDP- 160 (364)
T ss_pred HHHHHHHhchH-HHHHHHHHH-------------hhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcC-
Confidence 45689999974 788777532 234578899999999999999999999999999999999999996
Q ss_pred CCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
+.+.+||||||.|+.+..++....+..|..|+|||.+.| .|+.++||||.|||+.||+-|++.|.|.+..+.+..|+
T Consensus 161 -~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIi 239 (364)
T KOG0658|consen 161 -DTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEII 239 (364)
T ss_pred -CCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHH
Confidence 679999999999999988887788999999999998865 57999999999999999999999999988877777665
Q ss_pred hC------------C--------CCCCCCCC-----CCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCC
Q 008127 329 RN------------K--------PDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379 (577)
Q Consensus 329 ~~------------~--------~~~~~~~~-----~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~ 379 (577)
+- . +.+....| ...++++.+|+.++|.++|.+|.++.+++.||||.+....
T Consensus 240 k~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 240 KVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred HHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 41 1 11112222 3478899999999999999999999999999999987654
No 39
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.3e-47 Score=396.83 Aligned_cols=258 Identities=31% Similarity=0.554 Sum_probs=221.4
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++++.||+|+||.||+|++..+|+.||||++.+...........+.+|+.++..+ +||||++++++|.+++.+|+||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA-DNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCeEEEEE
Confidence 699999999999999999999999999999999765433334556788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
|||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 81 E~~~~g~L~~~l~~~-----------------~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~---~~~~~ 140 (364)
T cd05599 81 EYLPGGDMMTLLMKK-----------------DTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLD---AKGHI 140 (364)
T ss_pred CCCCCcHHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCE
Confidence 999999998877432 5689999999999999999999999999999999999998 47899
Q ss_pred eEEecCCCcccCCCC---------------------------------------CccccccCCccccchhccc-CCCCCC
Q 008127 257 KATDFGLSDFIKPGK---------------------------------------KFQDIVGSAYYVAPEVLKR-KSGPES 296 (577)
Q Consensus 257 kl~DFGla~~~~~~~---------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~ 296 (577)
||+|||++..+.... .....+||+.|+|||++.+ .++.++
T Consensus 141 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 220 (364)
T cd05599 141 KLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKEC 220 (364)
T ss_pred EEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCee
Confidence 999999986542211 0113479999999998765 468999
Q ss_pred chhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCC---HHHHhcCccc
Q 008127 297 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT---AAQALSHPWV 373 (577)
Q Consensus 297 DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt---~~~il~hp~f 373 (577)
|||||||++|+|++|..||.+.+..+.+..++.....+..+....+++++.+||.+||. +|.+|++ +.++++||||
T Consensus 221 DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~ 299 (364)
T cd05599 221 DWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFF 299 (364)
T ss_pred eeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCc
Confidence 99999999999999999999888888888877655444433334578999999999997 8999998 9999999999
Q ss_pred ccc
Q 008127 374 REG 376 (577)
Q Consensus 374 ~~~ 376 (577)
+..
T Consensus 300 ~~~ 302 (364)
T cd05599 300 KGV 302 (364)
T ss_pred CCC
Confidence 864
No 40
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.3e-47 Score=390.09 Aligned_cols=257 Identities=32% Similarity=0.525 Sum_probs=221.9
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||+|+||.||+|++..+|+.||||++.+...........+.+|+.++..+. ||||+++++++...+.+|+||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTK-SEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCC-CCCCccEEEEEEcCCEEEEEE
Confidence 6999999999999999999999999999999997654332334567889999999995 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++||+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 81 e~~~g~~L~~~l~~-----------------~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~ 140 (333)
T cd05600 81 EYVPGGDFRTLLNN-----------------LGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLID---ASGHI 140 (333)
T ss_pred eCCCCCCHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCCCE
Confidence 99999999887743 35789999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~ 335 (577)
||+|||++..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+.+..+........
T Consensus 141 kL~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 218 (333)
T cd05600 141 KLTDFGLSKGIVT--YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQ 218 (333)
T ss_pred EEEeCcCCccccc--ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcccccc
Confidence 9999999986543 3345689999999998865 468899999999999999999999998888877777765433322
Q ss_pred CCCC----CCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 336 RKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 336 ~~~~----~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.+.+ ..++.++.+||.+||..+|.+||++.++++||||+..
T Consensus 219 ~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 219 RPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred CCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence 2222 2568999999999999999999999999999999864
No 41
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=2.1e-47 Score=390.51 Aligned_cols=254 Identities=31% Similarity=0.557 Sum_probs=221.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCC-CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~-~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
++|.+.+.||+|+||.||+|.+..++ ..||+|.+.+.........+.+.+|+.+++.+ +||||+++++++.+++.+|+
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI-NHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCCcceEEEEEeCCEEEE
Confidence 46999999999999999999876655 68999998765433334566788999999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||||++|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++
T Consensus 109 v~Ey~~~g~L~~~i~~-----------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~---~~~ 168 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRR-----------------NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLD---KDG 168 (340)
T ss_pred EEeCCCCCcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEEC---CCC
Confidence 9999999999887643 36789999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
.+||+|||++...... ....+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+....+..+..+...
T Consensus 169 ~ikL~DFG~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~ 246 (340)
T PTZ00426 169 FIKMTDFGFAKVVDTR--TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIY 246 (340)
T ss_pred CEEEecCCCCeecCCC--cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCC
Confidence 9999999999876432 2456899999999998654 588999999999999999999999998888888888776544
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
++ +.+++.+.++|++||..||.+|+ |++++++||||+..
T Consensus 247 ~p----~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~ 290 (340)
T PTZ00426 247 FP----KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI 290 (340)
T ss_pred CC----CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 33 45789999999999999999995 89999999999864
No 42
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=4.5e-47 Score=394.87 Aligned_cols=259 Identities=30% Similarity=0.464 Sum_probs=217.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
.|++++.||+|+||+||+|++..+++.||||++.+...........+.+|+.+++.+ +||||+++++++.+.+.+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhc-CCCCeeeeEEEEecCCEEEEEE
Confidence 589999999999999999999999999999999765544444567789999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
|||+||+|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+
T Consensus 81 E~~~gg~L~~~l~~~-----------------~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~---~~~~~ 140 (381)
T cd05626 81 DYIPGGDMMSLLIRM-----------------EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILID---LDGHI 140 (381)
T ss_pred ecCCCCcHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEEC---CCCCE
Confidence 999999998877432 5689999999999999999999999999999999999998 47899
Q ss_pred eEEecCCCcccCCCC------------------------------------------------CccccccCCccccchhc
Q 008127 257 KATDFGLSDFIKPGK------------------------------------------------KFQDIVGSAYYVAPEVL 288 (577)
Q Consensus 257 kl~DFGla~~~~~~~------------------------------------------------~~~~~~gt~~y~aPE~~ 288 (577)
||+|||++....... .....+||+.|+|||++
T Consensus 141 kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~ 220 (381)
T cd05626 141 KLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVL 220 (381)
T ss_pred EEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHH
Confidence 999999975331000 01235799999999988
Q ss_pred cc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccc--cCcCCCCCHH
Q 008127 289 KR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV--KDPRARLTAA 365 (577)
Q Consensus 289 ~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~--~dP~~Rpt~~ 365 (577)
.+ .++.++|||||||++|+|++|..||...+..+....+.........+.+..+++++.+||.+|+. .+|..||++.
T Consensus 221 ~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~ 300 (381)
T cd05626 221 LRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGAD 300 (381)
T ss_pred cCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHH
Confidence 65 46889999999999999999999998887777666666544333444445689999999999654 4555699999
Q ss_pred HHhcCcccccc
Q 008127 366 QALSHPWVREG 376 (577)
Q Consensus 366 ~il~hp~f~~~ 376 (577)
++++||||+..
T Consensus 301 ~~l~hp~f~~~ 311 (381)
T cd05626 301 DIKAHPFFSEV 311 (381)
T ss_pred HHhcCcccCCC
Confidence 99999999864
No 43
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-47 Score=384.14 Aligned_cols=248 Identities=27% Similarity=0.398 Sum_probs=210.7
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCE-EEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC-eEEEE
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDR-VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-YVYIA 175 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~-vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-~~~lv 175 (577)
..+.+.||.|+||+||+|.++ |.. ||||++......... ...|.+|+.+|.+|+ |||||+++|++.... .++||
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~-HpNIV~f~G~~~~~~~~~~iV 118 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDES-RKAFRREASLLSRLR-HPNIVQFYGACTSPPGSLCIV 118 (362)
T ss_pred hhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHH-HHHHHHHHHHHHhCC-CCCeeeEEEEEcCCCCceEEE
Confidence 455666999999999999765 556 999999766543333 778999999999995 999999999999887 79999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC-ceeccCCCCcEEeecCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG-LVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~-iiHrDlKp~NILl~~~~~~~ 254 (577)
|||+++|+|.+++... ....++...+..++.||++|++|||+++ ||||||||+|||++ .+.
T Consensus 119 tEy~~~GsL~~~l~~~---------------~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~---~~~ 180 (362)
T KOG0192|consen 119 TEYMPGGSLSVLLHKK---------------RKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVD---LKG 180 (362)
T ss_pred EEeCCCCcHHHHHhhc---------------ccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEc---CCC
Confidence 9999999999987542 2478999999999999999999999999 99999999999998 465
Q ss_pred -CeeEEecCCCcccCCC-CCccccccCCccccchhcccC---CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 255 -SLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 255 -~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~---~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
++||+|||+++..... .......||+.|||||++.+. ++.++||||||+++|||+||+.||.+....++...+..
T Consensus 181 ~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~ 260 (362)
T KOG0192|consen 181 KTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVV 260 (362)
T ss_pred CEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 9999999999876654 334457899999999999854 79999999999999999999999999888666666665
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.......+ ..+++.+..||.+||..||.+||+..+++.
T Consensus 261 ~~~Rp~~p--~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 261 GGLRPPIP--KECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred cCCCCCCC--ccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 44332221 237899999999999999999999998865
No 44
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.9e-47 Score=394.18 Aligned_cols=259 Identities=29% Similarity=0.485 Sum_probs=223.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.+ +||||+++++++.+++.+|+|
T Consensus 43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~-~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 43 EDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHA-NSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCEEEEE
Confidence 4799999999999999999999999999999999764433333445678899999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 122 ~Ey~~gg~L~~~l~------------------~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~---~~~~ 180 (370)
T cd05596 122 MEYMPGGDLVNLMS------------------NYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD---KSGH 180 (370)
T ss_pred EcCCCCCcHHHHHH------------------hcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEc---CCCC
Confidence 99999999988663 24578899999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCC--CccccccCCccccchhccc-----CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 256 LKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR-----KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 256 vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
+||+|||++....... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+....+..+.
T Consensus 181 ~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~ 260 (370)
T cd05596 181 LKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 260 (370)
T ss_pred EEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHH
Confidence 9999999997654322 2235679999999998754 25789999999999999999999999988888888888
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCC--CCCHHHHhcCcccccc
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 376 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~--Rpt~~~il~hp~f~~~ 376 (577)
........+....+|.++.+||.+||..+|.+ |+|+.++++||||+..
T Consensus 261 ~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 261 DHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred cCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 76544444444568999999999999999988 9999999999999864
No 45
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=3.4e-47 Score=396.17 Aligned_cols=258 Identities=31% Similarity=0.504 Sum_probs=220.2
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++++.||+|+||.||+|++..+++.||||++.+...........+.+|+.+++.+ +||||+++++.+.+.+.+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~-~h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhC-CCCcCCeEEEEEEeCCEEEEEE
Confidence 589999999999999999999999999999999765443344567789999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
|||++|+|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 81 E~~~gg~L~~~l~~~-----------------~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~---~~g~~ 140 (382)
T cd05625 81 DYIPGGDMMSLLIRM-----------------GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILID---RDGHI 140 (382)
T ss_pred eCCCCCcHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCE
Confidence 999999998876432 5689999999999999999999999999999999999998 47899
Q ss_pred eEEecCCCcccCCC------------------------------------------------CCccccccCCccccchhc
Q 008127 257 KATDFGLSDFIKPG------------------------------------------------KKFQDIVGSAYYVAPEVL 288 (577)
Q Consensus 257 kl~DFGla~~~~~~------------------------------------------------~~~~~~~gt~~y~aPE~~ 288 (577)
||+|||++...... ......+||+.|+|||++
T Consensus 141 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~ 220 (382)
T cd05625 141 KLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVL 220 (382)
T ss_pred EEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHh
Confidence 99999997532100 001235799999999987
Q ss_pred cc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCC---H
Q 008127 289 KR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT---A 364 (577)
Q Consensus 289 ~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt---~ 364 (577)
.+ .++.++|||||||++|+|++|+.||.+.+..+....+.........+....+++++.++|.+|+ .+|.+|++ +
T Consensus 221 ~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~ 299 (382)
T cd05625 221 LRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGA 299 (382)
T ss_pred cCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCH
Confidence 64 5689999999999999999999999988887777777765544444455678999999999986 59999997 9
Q ss_pred HHHhcCcccccc
Q 008127 365 AQALSHPWVREG 376 (577)
Q Consensus 365 ~~il~hp~f~~~ 376 (577)
.++++||||+..
T Consensus 300 ~ei~~hp~f~~~ 311 (382)
T cd05625 300 DEIKAHPFFKTI 311 (382)
T ss_pred HHHhcCCCcCCc
Confidence 999999999864
No 46
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.1e-47 Score=366.24 Aligned_cols=264 Identities=30% Similarity=0.474 Sum_probs=218.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCC-eeEEEEEEEcCC----
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN-VVKFYNAFEDDN---- 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpn-iv~~~~~~~~~~---- 170 (577)
..|..+++||+|+||+||+|+++.+|+.||+|++...... +-.-....+|+.+|+.|+ |+| ||.+++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~-~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLS-HANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhC-CCcceEEEEeeeeecccccc
Confidence 3578888899999999999999999999999999765432 112344689999999995 999 999999998876
Q ss_pred --eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 171 --YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 171 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
.+++|+||+. -+|..++.... .....++...++.++.||+.||+|||+++|+||||||.|||++
T Consensus 89 ~~~l~lvfe~~d-~DL~~ymd~~~-------------~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~ 154 (323)
T KOG0594|consen 89 IGKLYLVFEFLD-RDLKKYMDSLP-------------KKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLIS 154 (323)
T ss_pred cceEEEEEEeec-ccHHHHHHhcc-------------ccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEEC
Confidence 8999999994 57877764331 0003577789999999999999999999999999999999999
Q ss_pred cCCCCCCeeEEecCCCcccC-CCCCccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 249 SAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
. .+.+||+|||+|+... +...+...++|.+|+|||++.+. |++..||||+|||++||+++++.|.+.++.+.+.
T Consensus 155 ~---~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~ 231 (323)
T KOG0594|consen 155 S---SGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLF 231 (323)
T ss_pred C---CCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHH
Confidence 4 8899999999999766 45557788999999999998764 6899999999999999999999999999888887
Q ss_pred HHHhCCCCCCCCCC--------------------------CCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 326 EVLRNKPDFRRKPW--------------------------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 326 ~i~~~~~~~~~~~~--------------------------~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.|..--.......| +..++...+++.+||+.+|.+|+|+..+|.||||.....
T Consensus 232 ~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~ 310 (323)
T KOG0594|consen 232 RIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPE 310 (323)
T ss_pred HHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccccc
Confidence 77652221111122 223457899999999999999999999999999998754
No 47
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-49 Score=385.25 Aligned_cols=256 Identities=28% Similarity=0.499 Sum_probs=223.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
..|...+.||+|+||.||+|.+..+++.||||++..... ....+.+.+|+.+|.++ ++|||.++|+.|..+..+|++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~--~deIediqqei~~Ls~~-~~~~it~yygsyl~g~~Lwii 89 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEA--EDEIEDIQQEISVLSQC-DSPNITEYYGSYLKGTKLWII 89 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhc--chhhHHHHHHHHHHHhc-CcchHHhhhhheeecccHHHH
Confidence 357888999999999999999999999999999977643 34578899999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||.||++.+.+.. ...+.+..+..++.+++.||.|||.++.+|||||+.|||+. ..+.
T Consensus 90 Mey~~gGsv~~lL~~-----------------~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s---~~g~ 149 (467)
T KOG0201|consen 90 MEYCGGGSVLDLLKS-----------------GNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLS---ESGD 149 (467)
T ss_pred HHHhcCcchhhhhcc-----------------CCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEe---ccCc
Confidence 999999999986642 34558899999999999999999999999999999999998 4689
Q ss_pred eeEEecCCCcccCCCCC-ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
|||+|||.+..+..... ..+++|||.|||||++.+ .|+.++||||||++.+||++|.+|+....+..++..|-+..++
T Consensus 150 vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP 229 (467)
T KOG0201|consen 150 VKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPP 229 (467)
T ss_pred EEEEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCC
Confidence 99999999987765433 378999999999999886 6799999999999999999999999888776555555444333
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
... ..+|+.+++||..||.+||+.||+|.++|+|+|++...
T Consensus 230 ~L~---~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 230 RLD---GDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAK 270 (467)
T ss_pred ccc---cccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcC
Confidence 222 26789999999999999999999999999999999844
No 48
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=4.2e-47 Score=384.43 Aligned_cols=248 Identities=26% Similarity=0.490 Sum_probs=215.9
Q ss_pred ecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCCCc
Q 008127 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183 (577)
Q Consensus 104 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 183 (577)
||+|+||.||+|++..+++.||+|++.+...........+.+|+.++.++ +||||+++++++...+.+|+|||||++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV-NCPFIVPLKFSFQSPEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence 79999999999999999999999998765433344567788999999999 59999999999999999999999999999
Q ss_pred hhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCC
Q 008127 184 LLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263 (577)
Q Consensus 184 L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGl 263 (577)
|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 80 L~~~l~~-----------------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~---~~~~~kl~Dfg~ 139 (312)
T cd05585 80 LFHHLQR-----------------EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLD---YQGHIALCDFGL 139 (312)
T ss_pred HHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEEC---CCCcEEEEECcc
Confidence 9887743 35689999999999999999999999999999999999998 478899999999
Q ss_pred CcccCC-CCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCC
Q 008127 264 SDFIKP-GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 341 (577)
Q Consensus 264 a~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 341 (577)
++.... .......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+....+.+..+......++ ..
T Consensus 140 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~----~~ 215 (312)
T cd05585 140 CKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFP----DG 215 (312)
T ss_pred cccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCC----Cc
Confidence 975432 2233456899999999988654 58899999999999999999999999888888888877655443 45
Q ss_pred CCHHHHHHHHHccccCcCCCC---CHHHHhcCcccccc
Q 008127 342 ISNSAKDFVKKLLVKDPRARL---TAAQALSHPWVREG 376 (577)
Q Consensus 342 ~s~~~~~li~~~l~~dP~~Rp---t~~~il~hp~f~~~ 376 (577)
+++++.+||.+||..||.+|| ++.++|.||||+..
T Consensus 216 ~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 216 FDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence 789999999999999999997 58999999999874
No 49
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.4e-47 Score=395.47 Aligned_cols=258 Identities=27% Similarity=0.492 Sum_probs=217.2
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|.+++.||+|+||.||+|.+..+|+.||||++.+...........+.+|+++++.+ +||||+++++++.+.+.+|+||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES-DSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCeeEEEE
Confidence 699999999999999999999999999999998765433344567788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
|||+||+|.+++.. ...+++..++.++.|++.||.|||++||+||||||+|||++ .++.+
T Consensus 81 E~~~gg~L~~~l~~-----------------~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~---~~~~~ 140 (377)
T cd05629 81 EFLPGGDLMTMLIK-----------------YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILID---RGGHI 140 (377)
T ss_pred eCCCCCcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC---CCCCE
Confidence 99999999887643 36789999999999999999999999999999999999998 47899
Q ss_pred eEEecCCCcccCCCC------------------------------------------------CccccccCCccccchhc
Q 008127 257 KATDFGLSDFIKPGK------------------------------------------------KFQDIVGSAYYVAPEVL 288 (577)
Q Consensus 257 kl~DFGla~~~~~~~------------------------------------------------~~~~~~gt~~y~aPE~~ 288 (577)
||+|||+++...... .....+||+.|+|||++
T Consensus 141 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 220 (377)
T cd05629 141 KLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIF 220 (377)
T ss_pred EEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHH
Confidence 999999986321100 00124799999999988
Q ss_pred cc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCC---CCH
Q 008127 289 KR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR---LTA 364 (577)
Q Consensus 289 ~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R---pt~ 364 (577)
.+ .++.++|||||||++|+|++|..||.+....+.+..+.........+....++.++.+||.+||. +|.+| +|+
T Consensus 221 ~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~ 299 (377)
T cd05629 221 LQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGA 299 (377)
T ss_pred ccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCH
Confidence 65 46899999999999999999999999888877777777644333333334578999999999998 67765 599
Q ss_pred HHHhcCcccccc
Q 008127 365 AQALSHPWVREG 376 (577)
Q Consensus 365 ~~il~hp~f~~~ 376 (577)
.+++.||||+..
T Consensus 300 ~~~l~hp~~~~~ 311 (377)
T cd05629 300 HEIKSHPFFRGV 311 (377)
T ss_pred HHHhcCCCcCCC
Confidence 999999999863
No 50
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=5.5e-47 Score=391.69 Aligned_cols=259 Identities=29% Similarity=0.483 Sum_probs=220.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.+ +||||+++++++..++.+|+|
T Consensus 43 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 43 EDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEE
Confidence 4799999999999999999999999999999998764433333456678899999988 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 122 ~Ey~~gg~L~~~l~------------------~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~---~~~~ 180 (370)
T cd05621 122 MEYMPGGDLVNLMS------------------NYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD---KHGH 180 (370)
T ss_pred EcCCCCCcHHHHHH------------------hcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC---CCCC
Confidence 99999999988663 23578999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCCC--ccccccCCccccchhcccC-----CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 256 LKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKRK-----SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~-----~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
+||+|||+|........ ....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+....+..+.
T Consensus 181 ~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~ 260 (370)
T cd05621 181 LKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIM 260 (370)
T ss_pred EEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99999999987643322 2456899999999998642 5789999999999999999999999988888888887
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCC--CCCHHHHhcCcccccc
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 376 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~--Rpt~~~il~hp~f~~~ 376 (577)
.....+..+....+++.+.+++..||..+|.+ |+|+.++++||||+..
T Consensus 261 ~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 261 DHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred hCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 75544443333467899999999999865544 8999999999999874
No 51
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3.6e-47 Score=395.21 Aligned_cols=258 Identities=28% Similarity=0.467 Sum_probs=219.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
.|++++.||+|+||.||+|++..+++.||||++.+...........+.+|+.+++.+ +||||+++++.|.+++.+|+||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCEEEEEE
Confidence 699999999999999999999999999999998765432333456788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
|||++|+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 81 E~~~~g~L~~~i~~-----------------~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~---~~~~i 140 (376)
T cd05598 81 DYIPGGDMMSLLIR-----------------LGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILID---RDGHI 140 (376)
T ss_pred eCCCCCcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEEC---CCCCE
Confidence 99999999987743 35688999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCC--------------------------------------------CCccccccCCccccchhcccC-
Q 008127 257 KATDFGLSDFIKPG--------------------------------------------KKFQDIVGSAYYVAPEVLKRK- 291 (577)
Q Consensus 257 kl~DFGla~~~~~~--------------------------------------------~~~~~~~gt~~y~aPE~~~~~- 291 (577)
||+|||+|..+... ......+||+.|+|||++.+.
T Consensus 141 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 220 (376)
T cd05598 141 KLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTG 220 (376)
T ss_pred EEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCC
Confidence 99999997532100 001235799999999988754
Q ss_pred CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCC---CHHHHh
Q 008127 292 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL---TAAQAL 368 (577)
Q Consensus 292 ~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp---t~~~il 368 (577)
++.++|||||||++|+|++|+.||.+....+....+.........+.+..+++++.++|.+|+ .+|.+|+ |+.+++
T Consensus 221 ~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell 299 (376)
T cd05598 221 YTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIK 299 (376)
T ss_pred CCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHh
Confidence 588999999999999999999999988887777777665444444445578999999999987 5999999 999999
Q ss_pred cCcccccc
Q 008127 369 SHPWVREG 376 (577)
Q Consensus 369 ~hp~f~~~ 376 (577)
+||||+..
T Consensus 300 ~h~~~~~~ 307 (376)
T cd05598 300 AHPFFKGI 307 (376)
T ss_pred CCCCcCCC
Confidence 99999863
No 52
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=8.9e-47 Score=384.52 Aligned_cols=250 Identities=29% Similarity=0.532 Sum_probs=216.0
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|.+..+|+.||||++.+...........+.+|+.+++.+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNT-RHPFLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCEEEEEEeCCCC
Confidence 3699999999999999999999999999765433344567788999999999 599999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|.+.+.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 80 g~L~~~l~~-----------------~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~---~~~~~kL~Df 139 (328)
T cd05593 80 GELFFHLSR-----------------ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLD---KDGHIKITDF 139 (328)
T ss_pred CCHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEEC---CCCcEEEecC
Confidence 999876643 36789999999999999999999999999999999999998 4788999999
Q ss_pred CCCcccCC-CCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008127 262 GLSDFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339 (577)
Q Consensus 262 Gla~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 339 (577)
|++..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+....+......++
T Consensus 140 G~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p---- 215 (328)
T cd05593 140 GLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFP---- 215 (328)
T ss_pred cCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCC----
Confidence 99876432 223345689999999998865 468899999999999999999999998888777777766554433
Q ss_pred CCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 340 PSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 340 ~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
..+++++.+||.+||..||.+|| ++.++++||||...
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 216 RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 45789999999999999999997 89999999999763
No 53
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=7e-47 Score=384.07 Aligned_cols=251 Identities=30% Similarity=0.551 Sum_probs=216.8
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|.++.+++.||||++.+...........+..|+.++..+.+||||+++++++...+.+|+|||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999999999999999987654333345567788999998876799999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|.+.+.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 81 g~L~~~i~~-----------------~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~---~~~~~kL~Df 140 (320)
T cd05590 81 GDLMFHIQK-----------------SRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLD---HEGHCKLADF 140 (320)
T ss_pred chHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC---CCCcEEEeeC
Confidence 999876643 36789999999999999999999999999999999999998 4788999999
Q ss_pred CCCcccC-CCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008127 262 GLSDFIK-PGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339 (577)
Q Consensus 262 Gla~~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 339 (577)
|++.... ........+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+++..+......++
T Consensus 141 G~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~---- 216 (320)
T cd05590 141 GMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP---- 216 (320)
T ss_pred CCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCC----
Confidence 9987542 22333456899999999988754 58899999999999999999999999888888888877654433
Q ss_pred CCCCHHHHHHHHHccccCcCCCCCH------HHHhcCcccccc
Q 008127 340 PSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVREG 376 (577)
Q Consensus 340 ~~~s~~~~~li~~~l~~dP~~Rpt~------~~il~hp~f~~~ 376 (577)
..++.++.+||.+||+.||.+||++ +++++||||+..
T Consensus 217 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 217 TWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred CCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence 3478999999999999999999998 999999999864
No 54
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=5.1e-47 Score=390.41 Aligned_cols=258 Identities=33% Similarity=0.610 Sum_probs=223.0
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|.+.+.||+|+||.||+|++..+|+.||||++.+...........+.+|+.++..+ +||||+++++++.+++.+|+||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADA-DSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc-CCCCccchhhheecCCeEEEEE
Confidence 699999999999999999999999999999999765433334566788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++|+|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 81 e~~~~~~L~~~l~~~-----------------~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~---~~~~~ 140 (350)
T cd05573 81 EYMPGGDLMNLLIRK-----------------DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILID---ADGHI 140 (350)
T ss_pred cCCCCCCHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCE
Confidence 999999998876432 6789999999999999999999999999999999999998 47899
Q ss_pred eEEecCCCcccCCCC------------------------------CccccccCCccccchhcccC-CCCCCchhhHHHHH
Q 008127 257 KATDFGLSDFIKPGK------------------------------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVIT 305 (577)
Q Consensus 257 kl~DFGla~~~~~~~------------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il 305 (577)
||+|||++....... ......||+.|+|||++.+. ++.++|||||||++
T Consensus 141 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il 220 (350)
T cd05573 141 KLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVIL 220 (350)
T ss_pred EeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhh
Confidence 999999998654332 22345799999999988754 68899999999999
Q ss_pred HHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCC-HHHHhcCcccccc
Q 008127 306 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT-AAQALSHPWVREG 376 (577)
Q Consensus 306 ~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt-~~~il~hp~f~~~ 376 (577)
|+|++|+.||.+....+....+.........+....+++++.+||.+||. ||.+||+ +.++++||||+..
T Consensus 221 ~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 221 YEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred hhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 99999999999888877777777733333333344579999999999997 9999999 9999999999864
No 55
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.6e-46 Score=382.34 Aligned_cols=256 Identities=26% Similarity=0.460 Sum_probs=220.3
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++++.||+|+||.||+|.+..+++.||||++.+.........+.+..|+.++..+.+|++|+.+++++...+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 48899999999999999999999999999999876543333456678889999999865667899999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++|+|.+.+.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 81 E~~~~g~L~~~~~~-----------------~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~~~ 140 (324)
T cd05587 81 EYVNGGDLMYHIQQ-----------------VGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD---AEGHI 140 (324)
T ss_pred cCCCCCcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEc---CCCCE
Confidence 99999999876643 35689999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccC-CCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
||+|||++.... ........+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+....+.+..+......+
T Consensus 141 kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~ 220 (324)
T cd05587 141 KIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSY 220 (324)
T ss_pred EEeecCcceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 999999987532 22333456899999999988764 5889999999999999999999999988888888887765544
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCH-----HHHhcCcccccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTA-----AQALSHPWVREG 376 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~-----~~il~hp~f~~~ 376 (577)
+ ..+++++.++|.+||..||.+|+++ .++++||||+..
T Consensus 221 ~----~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~ 263 (324)
T cd05587 221 P----KSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI 263 (324)
T ss_pred C----CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 3 3578999999999999999999976 899999999864
No 56
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-47 Score=383.46 Aligned_cols=244 Identities=27% Similarity=0.431 Sum_probs=210.7
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
.+++++.||+|.||+||+|.+..+ ..||+|.+....+ ..+.|.+|+++|++|+ |++||+++++|..++.+||||
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m----~~~~f~~Ea~iMk~L~-H~~lV~l~gV~~~~~piyIVt 280 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSM----SPEAFLREAQIMKKLR-HEKLVKLYGVCTKQEPIYIVT 280 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCC-CcccceEEecccc----ChhHHHHHHHHHHhCc-ccCeEEEEEEEecCCceEEEE
Confidence 567889999999999999986533 3899999876543 4467889999999995 999999999999988999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
|||+.|+|.++|... ....+...+.+.++.|||+|++||+++++|||||-..||||+ ++..|
T Consensus 281 E~m~~GsLl~yLr~~---------------~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~---~~~~v 342 (468)
T KOG0197|consen 281 EYMPKGSLLDYLRTR---------------EGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVD---EDLVV 342 (468)
T ss_pred EecccCcHHHHhhhc---------------CCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeec---cCceE
Confidence 999999999988642 357789999999999999999999999999999999999998 58899
Q ss_pred eEEecCCCcccCCCCCcccccc---CCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVG---SAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~g---t~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~ 331 (577)
||+|||||+.+.+. .+....| ...|.|||++. +.++.+||||||||+||||+| |+.||.+.+..+++..+-++.
T Consensus 343 KIsDFGLAr~~~d~-~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~Gy 421 (468)
T KOG0197|consen 343 KISDFGLARLIGDD-EYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGY 421 (468)
T ss_pred EEcccccccccCCC-ceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccC
Confidence 99999999965433 2322222 34699999886 678999999999999999999 999999999999999988764
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHh
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il 368 (577)
. -+.++.+|+++.+++..||+.+|++|||.+.+.
T Consensus 422 R---lp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 422 R---LPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred c---CCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 3 333467999999999999999999999998654
No 57
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.4e-46 Score=376.24 Aligned_cols=255 Identities=25% Similarity=0.417 Sum_probs=210.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||.|+||.||+|++..++..||+|.+..... ......+.+|+.+++.+ +||||+++++++..++.+|+|
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKNL-KHANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc--CCcchhHHHHHHHHHhC-CCCCEeeEEEEEcCCCeEEEE
Confidence 369999999999999999999999999999999865432 12335677899999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++ +|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 82 ~e~~~~-~l~~~l~~~----------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~---~~~~ 141 (288)
T cd07871 82 FEYLDS-DLKQYLDNC----------------GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLIN---EKGE 141 (288)
T ss_pred EeCCCc-CHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCC
Confidence 999974 887766422 24578999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+||+|||++...... .......||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+..+.+..+.....
T Consensus 142 ~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~ 221 (288)
T cd07871 142 LKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLG 221 (288)
T ss_pred EEECcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 999999999765322 22345678999999998764 458899999999999999999999988777666555433211
Q ss_pred CCCC--------------------------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 333 DFRR--------------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 333 ~~~~--------------------------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.... ...+.+++++.+||.+||+.||.+|||++++|+||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 222 TPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred CCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 1000 0123467889999999999999999999999999998
No 58
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.3e-46 Score=382.54 Aligned_cols=250 Identities=31% Similarity=0.541 Sum_probs=216.1
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|.+..+|..||+|++.............+.+|+.+++.+ +||||++++++|...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCEEEEEEeCCCC
Confidence 3699999999999999999999999998765433334556778899999999 599999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 80 ~~L~~~l~~-----------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~Df 139 (323)
T cd05595 80 GELFFHLSR-----------------ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDF 139 (323)
T ss_pred CcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEc---CCCCEEeccc
Confidence 999776643 35789999999999999999999999999999999999998 4788999999
Q ss_pred CCCcccCC-CCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008127 262 GLSDFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339 (577)
Q Consensus 262 Gla~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 339 (577)
|++..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+.......+......++
T Consensus 140 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p---- 215 (323)
T cd05595 140 GLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---- 215 (323)
T ss_pred HHhccccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC----
Confidence 99875322 233345689999999998864 468899999999999999999999998888888877776655443
Q ss_pred CCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 340 PSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 340 ~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
..+++++.+||.+||..||.+|| ++.++++||||...
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~ 257 (323)
T cd05595 216 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 257 (323)
T ss_pred CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence 35789999999999999999998 99999999999864
No 59
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=9.7e-47 Score=385.03 Aligned_cols=259 Identities=29% Similarity=0.503 Sum_probs=222.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|.+.+.||+|+||.||+|.++.+|+.||||++.+...........+.+|+.+++.+ +||||+++++++.+.+.+|+||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS-NSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCeEEEEE
Confidence 699999999999999999999999999999999765443334566788999999988 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 81 e~~~~~~L~~~l~~~----------------~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~---~~~~~ 141 (330)
T cd05601 81 EYQPGGDLLSLLNRY----------------EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLID---RTGHI 141 (330)
T ss_pred CCCCCCCHHHHHHHh----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEEC---CCCCE
Confidence 999999998877432 25689999999999999999999999999999999999998 47899
Q ss_pred eEEecCCCcccCCCCCc--cccccCCccccchhcc-------cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 257 KATDFGLSDFIKPGKKF--QDIVGSAYYVAPEVLK-------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~~~-------~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
||+|||++......... ....||+.|+|||++. ..++.++|||||||++|+|++|..||...+....+..+
T Consensus 142 kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i 221 (330)
T cd05601 142 KLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNI 221 (330)
T ss_pred EeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHH
Confidence 99999999876543322 2347999999999875 23578999999999999999999999988888888887
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
+........+..+.+++.+.+||.+||. +|.+|||+.++++||||+..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 222 MNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI 269 (330)
T ss_pred HcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence 7654333333345688999999999998 99999999999999999864
No 60
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.4e-46 Score=388.38 Aligned_cols=258 Identities=28% Similarity=0.500 Sum_probs=219.3
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
.|++.+.||+|+||.||+|.++.+++.||||++.............+.+|+.++..+ +||||+++++.+.+.+.+|+||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEA-DGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEEE
Confidence 689999999999999999999999999999999765433334567788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
|||+||+|.+.+.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 81 E~~~gg~L~~~l~~-----------------~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~---~~~~v 140 (360)
T cd05627 81 EFLPGGDMMTLLMK-----------------KDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLD---AKGHV 140 (360)
T ss_pred eCCCCccHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEEC---CCCCE
Confidence 99999999887743 36789999999999999999999999999999999999998 47899
Q ss_pred eEEecCCCcccCCCC------------------------------------CccccccCCccccchhccc-CCCCCCchh
Q 008127 257 KATDFGLSDFIKPGK------------------------------------KFQDIVGSAYYVAPEVLKR-KSGPESDVW 299 (577)
Q Consensus 257 kl~DFGla~~~~~~~------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~Diw 299 (577)
||+|||++....... .....+||+.|+|||++.+ .++.++|||
T Consensus 141 kL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~Diw 220 (360)
T cd05627 141 KLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWW 220 (360)
T ss_pred EEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceec
Confidence 999999987542110 0123579999999998865 468899999
Q ss_pred hHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCC---CHHHHhcCcccccc
Q 008127 300 SIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL---TAAQALSHPWVREG 376 (577)
Q Consensus 300 SlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp---t~~~il~hp~f~~~ 376 (577)
||||++|+|++|+.||.+.+....+..+.........+....+++++.+||.+|+. ||.+|+ ++.++++||||+..
T Consensus 221 SlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~ 299 (360)
T cd05627 221 SLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGV 299 (360)
T ss_pred cccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCC
Confidence 99999999999999999988888888887644333333333578999999999874 999998 48999999999874
No 61
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=3e-46 Score=380.15 Aligned_cols=256 Identities=26% Similarity=0.446 Sum_probs=221.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|.+.+.||+|+||.||+|.+..+++.||||++.+...........+..|..++..+.+||+|+++++++...+.+|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 48899999999999999999999999999999876543333345567788888888877999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++|+|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 81 E~~~~g~L~~~~~~-----------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~---~~~~~ 140 (323)
T cd05616 81 EYVNGGDLMYQIQQ-----------------VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD---SEGHI 140 (323)
T ss_pred cCCCCCCHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEEC---CCCcE
Confidence 99999999876643 35689999999999999999999999999999999999998 47899
Q ss_pred eEEecCCCcccCC-CCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
||+|||++..... .......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+.+..+......+
T Consensus 141 kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 220 (323)
T cd05616 141 KIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 220 (323)
T ss_pred EEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 9999999975432 2233456899999999988754 6899999999999999999999999988888888888765544
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCcccccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 376 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~ 376 (577)
+ ..+++++.+|+.+||+.||.+|++ ..++++||||+..
T Consensus 221 p----~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~ 263 (323)
T cd05616 221 P----KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 263 (323)
T ss_pred C----CcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence 3 357899999999999999999998 4899999999864
No 62
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.3e-46 Score=380.56 Aligned_cols=251 Identities=27% Similarity=0.493 Sum_probs=216.9
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|++..+++.||||++.+...........+..|+.++..+.+||||+++++++...+.+|+|||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36999999999999999999999999987654333345566788999998776799999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|.+.+.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 81 ~~L~~~l~~-----------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~---~~~~~kL~Df 140 (321)
T cd05591 81 GDLMFQIQR-----------------SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLD---AEGHCKLADF 140 (321)
T ss_pred CcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEEeec
Confidence 999876643 36789999999999999999999999999999999999998 4789999999
Q ss_pred CCCcccCC-CCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008127 262 GLSDFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339 (577)
Q Consensus 262 Gla~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 339 (577)
|++..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+......++
T Consensus 141 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p---- 216 (321)
T cd05591 141 GMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYP---- 216 (321)
T ss_pred ccceecccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----
Confidence 99875432 223345679999999998875 468899999999999999999999999998888888887654433
Q ss_pred CCCCHHHHHHHHHccccCcCCCC-------CHHHHhcCcccccc
Q 008127 340 PSISNSAKDFVKKLLVKDPRARL-------TAAQALSHPWVREG 376 (577)
Q Consensus 340 ~~~s~~~~~li~~~l~~dP~~Rp-------t~~~il~hp~f~~~ 376 (577)
..++.++.+||.+||..||.+|| ++.++++||||...
T Consensus 217 ~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~ 260 (321)
T cd05591 217 VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEI 260 (321)
T ss_pred CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence 34789999999999999999999 99999999999753
No 63
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=3.5e-46 Score=386.04 Aligned_cols=259 Identities=28% Similarity=0.475 Sum_probs=220.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|+++.+++.||+|++.+...........+.+|+.+++.+ +||||+++++++..++.+|+|
T Consensus 43 ~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~~~lv 121 (371)
T cd05622 43 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYLYMV 121 (371)
T ss_pred hhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEEEEE
Confidence 5799999999999999999999999999999998764433333455678899999988 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 122 ~Ey~~gg~L~~~~~~------------------~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~---~~~~ 180 (371)
T cd05622 122 MEYMPGGDLVNLMSN------------------YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD---KSGH 180 (371)
T ss_pred EcCCCCCcHHHHHHh------------------cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEC---CCCC
Confidence 999999999886632 3578899999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCC--CccccccCCccccchhcccC-----CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 256 LKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKRK-----SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 256 vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~-----~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
+||+|||++....... .....+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+....+..++
T Consensus 181 ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~ 260 (371)
T cd05622 181 LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 260 (371)
T ss_pred EEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9999999998664322 22356799999999998642 5789999999999999999999999988888888888
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCC--CCCHHHHhcCcccccc
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 376 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~--Rpt~~~il~hp~f~~~ 376 (577)
........+..+.++..+.+||..||..+|.+ |+++.++++||||+..
T Consensus 261 ~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 261 NHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred cCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 76544444444578999999999999844433 7899999999999874
No 64
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=3.9e-46 Score=380.08 Aligned_cols=250 Identities=26% Similarity=0.470 Sum_probs=209.8
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|.+..+++.||||++.+...........+.+|+.++..+.+||||++++++|...+.+|+|||||+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36999999999999999999999999997654433445667889999999997799999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 81 g~L~~~~~~-----------------~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~---~~~~~kL~Df 140 (329)
T cd05588 81 GDLMFHMQR-----------------QRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLD---AEGHIKLTDY 140 (329)
T ss_pred CCHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEECcC
Confidence 999876642 36799999999999999999999999999999999999998 4788999999
Q ss_pred CCCccc-CCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCC---------hhHHHHHHHhC
Q 008127 262 GLSDFI-KPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT---------EDGIFKEVLRN 330 (577)
Q Consensus 262 Gla~~~-~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~---------~~~~~~~i~~~ 330 (577)
|+++.. .........+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.... .......+...
T Consensus 141 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 220 (329)
T cd05588 141 GMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK 220 (329)
T ss_pred ccccccccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC
Confidence 998753 233344567899999999988754 5889999999999999999999995311 12233444444
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCC------HHHHhcCccccc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT------AAQALSHPWVRE 375 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt------~~~il~hp~f~~ 375 (577)
...++ ..++..+.++|.+||..||.+||| +.++++||||+.
T Consensus 221 ~~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~ 267 (329)
T cd05588 221 QIRIP----RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN 267 (329)
T ss_pred CCCCC----CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 33322 357899999999999999999997 789999999975
No 65
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=4.5e-46 Score=379.00 Aligned_cols=254 Identities=27% Similarity=0.483 Sum_probs=216.9
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc--CCCCeeEEEEEEEcCCeEEEE
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~~~~~~lv 175 (577)
|++.+.||+|+||.||+|.+..+|+.||||++.+.........+.+.+|+.++..+. +||||+++++++...+.+|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 688999999999999999999999999999997654333334566778877764332 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++|+|...+. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 81 ~E~~~~~~L~~~~~------------------~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~---~~~~ 139 (324)
T cd05589 81 MEYAAGGDLMMHIH------------------TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLD---TEGF 139 (324)
T ss_pred EcCCCCCcHHHHhh------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC---CCCc
Confidence 99999999976542 25689999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCC-CCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+||+|||++..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+......
T Consensus 140 ~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~ 219 (324)
T cd05589 140 VKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVR 219 (324)
T ss_pred EEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC
Confidence 99999999875432 233345789999999998865 4588999999999999999999999998888888888776554
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
++ ..+++.+.++|.+||..||.+|| ++.++++||||+..
T Consensus 220 ~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 220 YP----RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred CC----CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 33 35789999999999999999999 79999999999864
No 66
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=6.4e-46 Score=370.95 Aligned_cols=261 Identities=28% Similarity=0.451 Sum_probs=217.0
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
.|++.+.||+|+||.||++.+..+++.||||++.............+.+|+.+++.+ +||||+++++++..++.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhc-CCCCEeeeeeeecCCCeEEEEE
Confidence 488999999999999999999999999999998765432233345678899999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++|+|.+.+... ....+++..+..++.|++.||.|||+.||+||||||+||+++ +++.+
T Consensus 80 e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~ 141 (285)
T cd05605 80 TLMNGGDLKFHIYNM---------------GNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLD---DYGHI 141 (285)
T ss_pred eccCCCcHHHHHHhc---------------CcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEEC---CCCCE
Confidence 999999998766432 235689999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~ 335 (577)
+|+|||++............+||+.|+|||++.+ .++.++||||+||++|+|++|..||.+.........+........
T Consensus 142 ~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 221 (285)
T cd05605 142 RISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQ 221 (285)
T ss_pred EEeeCCCceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcc
Confidence 9999999987654444455689999999998864 458889999999999999999999987665444333322211112
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 336 RKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 336 ~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
...++.++..+.+||.+||..||.+|| ++.++++||||...
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05605 222 EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA 267 (285)
T ss_pred cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence 222345789999999999999999999 99999999999864
No 67
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=5e-46 Score=377.09 Aligned_cols=251 Identities=31% Similarity=0.533 Sum_probs=213.2
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|.+..+++.||||++.+.........+.+..|..++..+.+||||+++++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999999999999999987654322334556677888887666799999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 81 g~L~~~~~~-----------------~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~---~~~~~kL~Df 140 (316)
T cd05592 81 GDLMFHIQS-----------------SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLD---KDGHIKIADF 140 (316)
T ss_pred CcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEEC---CCCCEEEccC
Confidence 999876643 35789999999999999999999999999999999999998 4788999999
Q ss_pred CCCcccCCC-CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008127 262 GLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339 (577)
Q Consensus 262 Gla~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 339 (577)
|++...... ......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+.+..+....+.++
T Consensus 141 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~---- 216 (316)
T cd05592 141 GMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFP---- 216 (316)
T ss_pred cCCeECCCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----
Confidence 999764322 233456899999999988754 58899999999999999999999999888888877766544333
Q ss_pred CCCCHHHHHHHHHccccCcCCCCCH-HHHhcCcccccc
Q 008127 340 PSISNSAKDFVKKLLVKDPRARLTA-AQALSHPWVREG 376 (577)
Q Consensus 340 ~~~s~~~~~li~~~l~~dP~~Rpt~-~~il~hp~f~~~ 376 (577)
..++.++.+||.+||..||.+||++ .++++||||+..
T Consensus 217 ~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 217 RWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI 254 (316)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence 3478999999999999999999986 588899999864
No 68
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-48 Score=411.37 Aligned_cols=259 Identities=29% Similarity=0.486 Sum_probs=231.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|.|+++||+|+||.|.+++++.|++.||+|++.+-.+.......-|+.|..+|-.- +.++|+.+.-.|.++.++|+|
T Consensus 75 ~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~-ns~Wiv~LhyAFQD~~~LYlV 153 (1317)
T KOG0612|consen 75 EDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFG-NSEWIVQLHYAFQDERYLYLV 153 (1317)
T ss_pred HhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcC-CcHHHHHHHHHhcCccceEEE
Confidence 4799999999999999999999999999999999887666556677788999998755 799999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|...+. +...+++..++.|+..|+.||.-||+.|+|||||||+||||+ ..|+
T Consensus 154 MdY~pGGDlltLlS-----------------k~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld---~~GH 213 (1317)
T KOG0612|consen 154 MDYMPGGDLLTLLS-----------------KFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLD---KSGH 213 (1317)
T ss_pred EecccCchHHHHHh-----------------hcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEec---ccCc
Confidence 99999999987653 345899999999999999999999999999999999999999 5899
Q ss_pred eeEEecCCCcccCC-CCC-ccccccCCccccchhcc------cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 256 LKATDFGLSDFIKP-GKK-FQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 256 vkl~DFGla~~~~~-~~~-~~~~~gt~~y~aPE~~~------~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
|||+|||.+-.+.. +.. ....+|||.|+|||++. +.|++.+|+||+||++|||++|.+||+..+.-+.|.+|
T Consensus 214 ikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KI 293 (1317)
T KOG0612|consen 214 IKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKI 293 (1317)
T ss_pred EeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHH
Confidence 99999999877653 332 34678999999999984 45799999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCC---HHHHhcCcccccc
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT---AAQALSHPWVREG 376 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt---~~~il~hp~f~~~ 376 (577)
+.....+..+....+|+++++||+++++ +|+.|.. ++++..||||...
T Consensus 294 m~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~ 344 (1317)
T KOG0612|consen 294 MNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGI 344 (1317)
T ss_pred hchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCC
Confidence 9886555555556799999999999998 6999998 9999999999975
No 69
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-47 Score=355.11 Aligned_cols=267 Identities=36% Similarity=0.627 Sum_probs=234.2
Q ss_pred ccccceee-eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 93 DFDRRYTI-GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 93 ~~~~~y~~-~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
.|.+-|++ .+.||+|+||.|--+....+|..||||+|.+.. ......+.+|++++.+.++|+||++++++|+++..
T Consensus 74 ~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~---gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~ 150 (463)
T KOG0607|consen 74 KFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP---GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTR 150 (463)
T ss_pred hHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCC---chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccce
Confidence 35556776 468999999999999999999999999998863 35678899999999999999999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+|||-|.||.|+.+|.+. ..|++.++..+.++|+.||.+||.+||.||||||+|||....+
T Consensus 151 FYLVfEKm~GGplLshI~~~-----------------~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn 213 (463)
T KOG0607|consen 151 FYLVFEKMRGGPLLSHIQKR-----------------KHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPN 213 (463)
T ss_pred EEEEEecccCchHHHHHHHh-----------------hhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCC
Confidence 99999999999999988654 7799999999999999999999999999999999999998766
Q ss_pred CCCCeeEEecCCCcccCCC--------CCccccccCCccccchhcc---c---CCCCCCchhhHHHHHHHHHhCCCCCCC
Q 008127 252 EDSSLKATDFGLSDFIKPG--------KKFQDIVGSAYYVAPEVLK---R---KSGPESDVWSIGVITYILLCGRRPFWD 317 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~--------~~~~~~~gt~~y~aPE~~~---~---~~~~~~DiwSlG~il~el~tg~~Pf~~ 317 (577)
.-.-||||||.+..-+... ....+.+|+..|||||+.. + .|..++|.||||||||.|+.|.+||.+
T Consensus 214 ~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG 293 (463)
T KOG0607|consen 214 KVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVG 293 (463)
T ss_pred CcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccC
Confidence 6667999999987654322 2344678999999999753 2 468899999999999999999999954
Q ss_pred CC---------------hhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCC
Q 008127 318 KT---------------EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379 (577)
Q Consensus 318 ~~---------------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~ 379 (577)
.- ...++..|..+..+|+...|..+|.+++++|..+|..||.+|.++.++++|||++.....
T Consensus 294 ~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 294 HCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPE 370 (463)
T ss_pred ccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchh
Confidence 21 245788899999999999999999999999999999999999999999999999876544
No 70
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.5e-46 Score=381.01 Aligned_cols=250 Identities=30% Similarity=0.534 Sum_probs=215.0
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~-~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 3699999999999999999999999999765433334556778899999999 599999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
|+|.+++.. ...+++..++.++.||+.||.|||+ .||+||||||+|||++ .++.+||+|
T Consensus 80 ~~L~~~l~~-----------------~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~---~~~~~kL~D 139 (325)
T cd05594 80 GELFFHLSR-----------------ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITD 139 (325)
T ss_pred CcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEEC---CCCCEEEec
Confidence 999876642 3578999999999999999999997 7999999999999998 478899999
Q ss_pred cCCCcccC-CCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCC
Q 008127 261 FGLSDFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 338 (577)
Q Consensus 261 FGla~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 338 (577)
||++.... ........+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+......++
T Consensus 140 fg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p--- 216 (325)
T cd05594 140 FGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP--- 216 (325)
T ss_pred CCCCeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCC---
Confidence 99987532 2233345679999999998865 468899999999999999999999998888777777766554443
Q ss_pred CCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 339 WPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 339 ~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
..+++++.+||.+||..||++|+ ++.++++||||+..
T Consensus 217 -~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 217 -RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred -CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence 35789999999999999999997 99999999999864
No 71
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=4.9e-46 Score=377.17 Aligned_cols=251 Identities=28% Similarity=0.501 Sum_probs=213.2
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|.++.+|+.||+|++.+...........+..|..++..+.+||||+++++++...+.+|+|||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999999999999999987643222234556778888887766799999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++ .++.+||+||
T Consensus 81 g~L~~~i~~-----------------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~---~~~~~kl~Df 140 (316)
T cd05620 81 GDLMFHIQD-----------------KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLD---RDGHIKIADF 140 (316)
T ss_pred CcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEeCcc
Confidence 999876643 36789999999999999999999999999999999999998 4778999999
Q ss_pred CCCcccCC-CCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008127 262 GLSDFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339 (577)
Q Consensus 262 Gla~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 339 (577)
|++..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+....+....+.++
T Consensus 141 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~---- 216 (316)
T cd05620 141 GMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYP---- 216 (316)
T ss_pred CCCeecccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----
Confidence 99875322 223345689999999999875 468899999999999999999999998888888777766544433
Q ss_pred CCCCHHHHHHHHHccccCcCCCCCH-HHHhcCcccccc
Q 008127 340 PSISNSAKDFVKKLLVKDPRARLTA-AQALSHPWVREG 376 (577)
Q Consensus 340 ~~~s~~~~~li~~~l~~dP~~Rpt~-~~il~hp~f~~~ 376 (577)
..++.++.+||.+||+.||.+||++ .++++||||+..
T Consensus 217 ~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~ 254 (316)
T cd05620 217 RWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTI 254 (316)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCC
Confidence 2478999999999999999999998 588899999864
No 72
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=6.7e-46 Score=374.22 Aligned_cols=259 Identities=26% Similarity=0.414 Sum_probs=207.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|.++.+++.||||++..... ......+.+|+.+++.+ +||||+++++++..+..+|+|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGL-KHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhC-CCCCcCeEEEEEecCCeEEEE
Confidence 479999999999999999999999999999999875432 12234567899999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++ ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 82 ~e~~~-~~l~~~~~~~----------------~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~~ 141 (303)
T cd07869 82 FEYVH-TDLCQYMDKH----------------PGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLIS---DTGE 141 (303)
T ss_pred EECCC-cCHHHHHHhC----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCC
Confidence 99995 6777765322 35688999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCC-CCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCCh-hHHHHHHHhC-
Q 008127 256 LKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRN- 330 (577)
Q Consensus 256 vkl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~-~~~~~~i~~~- 330 (577)
+||+|||++..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+... .+.+..+...
T Consensus 142 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 221 (303)
T cd07869 142 LKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVL 221 (303)
T ss_pred EEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHh
Confidence 99999999875432 223345678999999998764 357889999999999999999999977533 2333322211
Q ss_pred -CC------------CCCCCC------------C--CCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 331 -KP------------DFRRKP------------W--PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 331 -~~------------~~~~~~------------~--~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.+ .+.... | ...++.+.+||.+||+.||++|||+.++|+||||+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~ 295 (303)
T cd07869 222 GTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP 295 (303)
T ss_pred CCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence 00 000000 0 12456789999999999999999999999999998753
No 73
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.2e-45 Score=375.51 Aligned_cols=256 Identities=25% Similarity=0.442 Sum_probs=220.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||+|+||.||+|.++.+|+.||||++.+.........+.+..|+.++..+.+||+|+++++++...+.+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 37888999999999999999999999999999876543333345667889999988876788999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++||+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 81 Ey~~~g~L~~~i~~-----------------~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~---~~~~i 140 (323)
T cd05615 81 EYVNGGDLMYHIQQ-----------------VGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLD---SEGHI 140 (323)
T ss_pred cCCCCCcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCE
Confidence 99999999886643 36789999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCC-CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
||+|||++...... ......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.........+......+
T Consensus 141 kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~ 220 (323)
T cd05615 141 KIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSY 220 (323)
T ss_pred EEeccccccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 99999998754322 223456799999999988754 5889999999999999999999999988888888888765544
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCcccccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 376 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~ 376 (577)
+ ..++.++.+++.+||..+|.+|++ ..++++||||+..
T Consensus 221 p----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 221 P----KSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred C----ccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 3 457899999999999999999997 5799999999864
No 74
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=7e-46 Score=376.46 Aligned_cols=251 Identities=29% Similarity=0.517 Sum_probs=216.2
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|.+..+++.||||++.+...........+.+|+.++..+.+||||+++++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999999999999999997654333345566788999998886799999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 81 ~~L~~~~~~-----------------~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~---~~~~~kl~Df 140 (318)
T cd05570 81 GDLMFHIQR-----------------SGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLD---SEGHIKIADF 140 (318)
T ss_pred CCHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEEC---CCCcEEeccc
Confidence 999876643 35789999999999999999999999999999999999998 4788999999
Q ss_pred CCCcccC-CCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008127 262 GLSDFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339 (577)
Q Consensus 262 Gla~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 339 (577)
|++.... ........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+.......+......++
T Consensus 141 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~---- 216 (318)
T cd05570 141 GMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYP---- 216 (318)
T ss_pred CCCeecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC----
Confidence 9987532 2223345679999999998875 458899999999999999999999998888877777776654433
Q ss_pred CCCCHHHHHHHHHccccCcCCCCCH-----HHHhcCcccccc
Q 008127 340 PSISNSAKDFVKKLLVKDPRARLTA-----AQALSHPWVREG 376 (577)
Q Consensus 340 ~~~s~~~~~li~~~l~~dP~~Rpt~-----~~il~hp~f~~~ 376 (577)
..++..+.+||.+||..||.+|||+ .++++||||+..
T Consensus 217 ~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 217 RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 3578999999999999999999999 999999999874
No 75
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=5.9e-46 Score=392.17 Aligned_cols=260 Identities=23% Similarity=0.412 Sum_probs=210.1
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC-----
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD----- 169 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~----- 169 (577)
..+|++++.||+|+||.||+|.+..+++.||||++.... ....+|+.+++.+ +||||++++++|...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l-~h~niv~l~~~~~~~~~~~~ 136 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNL-NHINIIFLKDYYYTECFKKN 136 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhc-CCCCCcceeeeEeecccccC
Confidence 457999999999999999999999999999999885432 2245799999999 599999999877432
Q ss_pred ---CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEE
Q 008127 170 ---NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 246 (577)
Q Consensus 170 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NIL 246 (577)
..+++||||+++ +|.+.+... ......+++..++.++.||+.||.|||++||+||||||+|||
T Consensus 137 ~~~~~l~lvmE~~~~-~l~~~~~~~-------------~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NIL 202 (440)
T PTZ00036 137 EKNIFLNVVMEFIPQ-TVHKYMKHY-------------ARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLL 202 (440)
T ss_pred CCceEEEEEEecCCc-cHHHHHHHH-------------hhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEE
Confidence 257899999975 676655321 123467899999999999999999999999999999999999
Q ss_pred eecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHH
Q 008127 247 FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324 (577)
Q Consensus 247 l~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~ 324 (577)
++. .++.+||+|||+|+...........+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+..+.+
T Consensus 203 l~~--~~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~ 280 (440)
T PTZ00036 203 IDP--NTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQL 280 (440)
T ss_pred EcC--CCCceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 984 345799999999987765555556789999999998764 4688999999999999999999999988776665
Q ss_pred HHHHhCCC------------C-----CCCC--------CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 325 KEVLRNKP------------D-----FRRK--------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 325 ~~i~~~~~------------~-----~~~~--------~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
..++.... . ++.. .....++++.+||.+||.+||.+|||+.++|+||||+....
T Consensus 281 ~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 281 VRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRD 359 (440)
T ss_pred HHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhc
Confidence 55543110 0 1100 01236789999999999999999999999999999987543
No 76
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1e-46 Score=377.17 Aligned_cols=258 Identities=28% Similarity=0.474 Sum_probs=231.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe-EEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY-VYI 174 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~-~~l 174 (577)
++|.+++.+|+|+||.+++++++.++..||+|.|.......+ ......+|+.+++++. |||||.+++.|..++. ++|
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~-~r~~A~~E~~lis~~~-hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEP-ERRSAIQEMDLLSKLL-HPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCch-hhHHHHHHHHHHHhcc-CCCeeeeccchhcCCceEEE
Confidence 479999999999999999999999999999999987765444 3457889999999995 9999999999998887 999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||+||+||+|.+.+... +...|+++.+..|+.||+.|+.|||+++|+|||||+.||+++ .+.
T Consensus 82 vm~Y~eGg~l~~~i~~~---------------k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Niflt---k~~ 143 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQ---------------KGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLT---KDK 143 (426)
T ss_pred EEeecCCCCHHHHHHHH---------------hhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhcc---ccC
Confidence 99999999999988765 357799999999999999999999999999999999999999 477
Q ss_pred CeeEEecCCCcccCCCC-CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 255 SLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
.|||+|||+|+.+.+.. ...+.+|||.||+||++.+. |+.|+|||||||++|||++-+++|.+.+...+..+|.....
T Consensus 144 ~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~ 223 (426)
T KOG0589|consen 144 KVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLY 223 (426)
T ss_pred ceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccC
Confidence 88999999999988766 55678999999999999874 69999999999999999999999999999999999988763
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.. .....+.+++.+|+.||..+|..||++.++|.+|.+..+
T Consensus 224 ~P---lp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~~ 264 (426)
T KOG0589|consen 224 SP---LPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLRY 264 (426)
T ss_pred CC---CCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhhH
Confidence 22 224678999999999999999999999999999988754
No 77
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=6.9e-46 Score=379.09 Aligned_cols=256 Identities=27% Similarity=0.509 Sum_probs=212.7
Q ss_pred ceeeeeeecccCCeEEEEEEEc---CCCCEEEEEEecccccC-chhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMI-LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
+|++++.||+|+||.||+|++. .+++.||+|++.+.... .....+.+.+|+.++..+.+||||+++++++..++.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4899999999999999999864 47899999998654321 1234566889999999997799999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+|||||++|+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .
T Consensus 81 ~lv~e~~~~g~L~~~l~~-----------------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~---~ 140 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ-----------------RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLD---S 140 (332)
T ss_pred EEEEeCCCCCcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEEC---C
Confidence 999999999999887743 36689999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCCC--CccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCC----hhHHH
Q 008127 253 DSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKT----EDGIF 324 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~----~~~~~ 324 (577)
++.+||+|||+++...... .....+||+.|+|||++.+. ++.++|||||||++|+|++|..||.... .....
T Consensus 141 ~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~ 220 (332)
T cd05614 141 EGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVS 220 (332)
T ss_pred CCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHH
Confidence 7889999999997653322 22356899999999998753 4788999999999999999999996432 23344
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
..+....+.+ .+.+++.+.+||.+||..||++|| +++++++||||+..
T Consensus 221 ~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 221 RRILKCDPPF----PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred HHHhcCCCCC----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 4444433332 245789999999999999999999 88999999999864
No 78
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.1e-45 Score=376.65 Aligned_cols=251 Identities=25% Similarity=0.463 Sum_probs=209.3
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.++.++.+||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999999999999999997654433445667889999998887799999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 81 ~~L~~~~~~-----------------~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~---~~~~~kL~Df 140 (329)
T cd05618 81 GDLMFHMQR-----------------QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD---SEGHIKLTDY 140 (329)
T ss_pred CCHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC---CCCCEEEeeC
Confidence 999776532 36789999999999999999999999999999999999998 4789999999
Q ss_pred CCCcccC-CCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCC---------ChhHHHHHHHhC
Q 008127 262 GLSDFIK-PGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDK---------TEDGIFKEVLRN 330 (577)
Q Consensus 262 Gla~~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~---------~~~~~~~~i~~~ 330 (577)
|+++... ........+||+.|+|||++.+. ++.++|||||||++|+|++|+.||... ........+...
T Consensus 141 G~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~ 220 (329)
T cd05618 141 GMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK 220 (329)
T ss_pred CccccccCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcC
Confidence 9997532 23334456899999999988754 588999999999999999999999521 112233444444
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCC------HHHHhcCcccccc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT------AAQALSHPWVREG 376 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt------~~~il~hp~f~~~ 376 (577)
...++ ..++..+.+||.+||..||.+||| +.++++||||+..
T Consensus 221 ~~~~p----~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 221 QIRIP----RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred CCCCC----CCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 33332 457899999999999999999998 5899999999764
No 79
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1e-45 Score=374.74 Aligned_cols=252 Identities=29% Similarity=0.501 Sum_probs=213.4
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|++..+++.||||++................|..++..+.+||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999999999999999987653222234456677888887765799999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 81 g~L~~~l~~-----------------~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~---~~~~~kl~Df 140 (316)
T cd05619 81 GDLMFHIQS-----------------CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLD---TDGHIKIADF 140 (316)
T ss_pred CcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC---CCCCEEEccC
Confidence 999887643 25688999999999999999999999999999999999998 4778999999
Q ss_pred CCCcccCC-CCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008127 262 GLSDFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339 (577)
Q Consensus 262 Gla~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 339 (577)
|++..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+.+..+....+.++
T Consensus 141 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~---- 216 (316)
T cd05619 141 GMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYP---- 216 (316)
T ss_pred CcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----
Confidence 99875322 223345689999999998875 458899999999999999999999998888877777765544332
Q ss_pred CCCCHHHHHHHHHccccCcCCCCCHH-HHhcCccccccC
Q 008127 340 PSISNSAKDFVKKLLVKDPRARLTAA-QALSHPWVREGG 377 (577)
Q Consensus 340 ~~~s~~~~~li~~~l~~dP~~Rpt~~-~il~hp~f~~~~ 377 (577)
..++.++.+||.+||+.||.+||++. ++++||||+...
T Consensus 217 ~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~ 255 (316)
T cd05619 217 RWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREID 255 (316)
T ss_pred ccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCC
Confidence 34788999999999999999999996 899999998753
No 80
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1e-45 Score=369.95 Aligned_cols=255 Identities=27% Similarity=0.451 Sum_probs=208.2
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||+|+||.||+|+++.+++.||||++..... .......+.+|+.+++.+ +||||+++++++..++.+|+||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-NEEVKETTLRELKMLRTL-KQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc-cccchhhHHHHHHHHHhC-CCccccchhhhEecCCEEEEEE
Confidence 69999999999999999999999999999999875432 223456788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++++.+.. +.. ....+++..++.++.||+.||.|||+.||+||||||+||+++ .++.+
T Consensus 80 e~~~~~~l~~-~~~----------------~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~---~~~~~ 139 (287)
T cd07848 80 EYVEKNMLEL-LEE----------------MPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLIS---HNDVL 139 (287)
T ss_pred ecCCCCHHHH-HHh----------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCcE
Confidence 9998865533 211 235689999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCC--CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC---
Q 008127 257 KATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--- 330 (577)
Q Consensus 257 kl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~--- 330 (577)
||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+..+....+...
T Consensus 140 kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~ 219 (287)
T cd07848 140 KLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGP 219 (287)
T ss_pred EEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCC
Confidence 999999998764322 2335679999999998765 4688999999999999999999999877654443332221
Q ss_pred -----------CCCCCCC--------------CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 331 -----------KPDFRRK--------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 331 -----------~~~~~~~--------------~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.+.+... .+..+|.++.+||++||+.||++|||++++|+||||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 220 LPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred CCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 0100000 012367889999999999999999999999999998
No 81
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.7e-45 Score=368.86 Aligned_cols=257 Identities=26% Similarity=0.382 Sum_probs=208.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcC-CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc--CCCCeeEEEEEEE-----c
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKA-NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFE-----D 168 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~-~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~-----~ 168 (577)
+|++.+.||+|+||.||+|.+.. +|+.||||.+....... .....+.+|+.+++.+. +||||+++++++. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC-CchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 69999999999999999999854 46889999886543221 22345667888877764 5999999999885 3
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
...+++||||++ ++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~---------------~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~ 144 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKV---------------PEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT 144 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhC---------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEc
Confidence 456899999996 5888766432 234589999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.++.+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+..+.+..+
T Consensus 145 ---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i 221 (290)
T cd07862 145 ---SSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKI 221 (290)
T ss_pred ---CCCCEEEccccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHH
Confidence 478899999999987654444456689999999998754 4688999999999999999999999988877777666
Q ss_pred HhCCCCCCC-----------------------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 328 LRNKPDFRR-----------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 328 ~~~~~~~~~-----------------------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
+........ ...+.+++.+.+|+.+||+.||++|||+.++|+||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 222 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred HHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 542211000 0124577889999999999999999999999999998
No 82
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-47 Score=356.08 Aligned_cols=257 Identities=31% Similarity=0.545 Sum_probs=234.8
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
-++|..+++||+|.||+|-+|+.+.+|+.||||++++.-.........-..|-++|+..+ ||.+..+--.|+..+.+|+
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~-HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCR-HPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhcc-CcHHHHhhhhhccCceEEE
Confidence 357889999999999999999999999999999998877766667778889999999985 9999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+.||.|+-+|.+ ...|++..++.+-..|+.||.|||+++||+||||.+|.||+ .+|
T Consensus 246 VMeyanGGeLf~HLsr-----------------er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLD---kDG 305 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSR-----------------ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLD---KDG 305 (516)
T ss_pred EEEEccCceEeeehhh-----------------hhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheec---cCC
Confidence 9999999999876643 47799999999999999999999999999999999999999 689
Q ss_pred CeeEEecCCCcc-cCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 255 SLKATDFGLSDF-IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 ~vkl~DFGla~~-~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
++||+|||+++. +..+....++||||.|+|||++.. .|+.++|+|.+||++|||++|+.||...+...++..|+-...
T Consensus 306 HIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~ 385 (516)
T KOG0690|consen 306 HIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDL 385 (516)
T ss_pred ceEeeecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhc
Confidence 999999999974 455677789999999999999975 579999999999999999999999999999999999999888
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
.|++ .++++++.|+..+|.+||.+|. .+.+|.+|+||...
T Consensus 386 kFPr----~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v 430 (516)
T KOG0690|consen 386 KFPR----TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASV 430 (516)
T ss_pred cCCc----cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccC
Confidence 8875 5899999999999999999998 58999999999875
No 83
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.1e-45 Score=375.90 Aligned_cols=250 Identities=27% Similarity=0.484 Sum_probs=211.4
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHH-HHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI-LQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~-l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
+.||+|+||+||+|++..+|+.||||++.+...........+..|..+ ++.+ +||||+++++++...+.+|+||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhC-CCCCCCCeeEEEEeCCEEEEEEcCCC
Confidence 369999999999999999999999999876533222334455666654 4566 69999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
+|+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|
T Consensus 80 ~g~L~~~l~~-----------------~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~---~~~~~kl~D 139 (323)
T cd05575 80 GGELFFHLQR-----------------ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLD---SQGHVVLTD 139 (323)
T ss_pred CCCHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC---CCCcEEEec
Confidence 9999876643 36789999999999999999999999999999999999998 478999999
Q ss_pred cCCCcccCC-CCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCC
Q 008127 261 FGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 338 (577)
Q Consensus 261 FGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 338 (577)
||++..... .......+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..+.+..+.......
T Consensus 140 fg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~---- 215 (323)
T cd05575 140 FGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRL---- 215 (323)
T ss_pred cCCCcccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCC----
Confidence 999875422 2333456799999999988654 5889999999999999999999999988888888887765433
Q ss_pred CCCCCHHHHHHHHHccccCcCCCCCH----HHHhcCcccccc
Q 008127 339 WPSISNSAKDFVKKLLVKDPRARLTA----AQALSHPWVREG 376 (577)
Q Consensus 339 ~~~~s~~~~~li~~~l~~dP~~Rpt~----~~il~hp~f~~~ 376 (577)
.+.+++.+.++|.+||+.||.+||++ .++++||||...
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~ 257 (323)
T cd05575 216 KPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSI 257 (323)
T ss_pred CCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCC
Confidence 24678999999999999999999988 699999999763
No 84
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=3.4e-45 Score=373.44 Aligned_cols=261 Identities=27% Similarity=0.485 Sum_probs=217.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||++++..+++.||||++.+...........+.+|+.++..+ +||||+++++++..++.+|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv 79 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNG-DRRWITNLHYAFQDENNLYLV 79 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCceEEEEecCCeEEEE
Confidence 3699999999999999999999999999999999764433334456688999999988 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++||+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 80 ~e~~~g~~L~~~l~~~----------------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~---~~~~ 140 (331)
T cd05597 80 MDYYVGGDLLTLLSKF----------------EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLD---KNGH 140 (331)
T ss_pred EecCCCCcHHHHHHHh----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEEC---CCCC
Confidence 9999999998877432 35689999999999999999999999999999999999997 4788
Q ss_pred eeEEecCCCcccCCCCCc--cccccCCccccchhccc------CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 256 LKATDFGLSDFIKPGKKF--QDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~~~~------~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
+||+|||++......... ...+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+.+..+
T Consensus 141 ~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i 220 (331)
T cd05597 141 IRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 220 (331)
T ss_pred EEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHH
Confidence 999999998765433222 23579999999999852 3577899999999999999999999988877777777
Q ss_pred HhCCCCCCC-CCCCCCCHHHHHHHHHccccCcCC--CCCHHHHhcCcccccc
Q 008127 328 LRNKPDFRR-KPWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 376 (577)
Q Consensus 328 ~~~~~~~~~-~~~~~~s~~~~~li~~~l~~dP~~--Rpt~~~il~hp~f~~~ 376 (577)
......+.. ...+.+++.+.+||.+||..++.+ |+++.++++||||...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 221 MNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred HcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 664433222 123458899999999998764444 7899999999999764
No 85
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.1e-45 Score=376.48 Aligned_cols=259 Identities=30% Similarity=0.478 Sum_probs=207.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC-----Ce
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD-----NY 171 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~-----~~ 171 (577)
+|++.+.||+|+||.||+|++..+|..||||++..... .......+.+|+.+++.+ +||||+++++++... ..
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~ 78 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFE-HVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREFKD 78 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhc-cchhHHHHHHHHHHHHhC-CCCCEeeecceEeccCCCCCce
Confidence 58999999999999999999999999999999864321 122345688999999999 599999999988543 35
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+|||||. ++|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 79 ~~lv~e~~~-~~L~~~l~~-----------------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~--- 137 (338)
T cd07859 79 IYVVFELME-SDLHQVIKA-----------------NDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILAN--- 137 (338)
T ss_pred EEEEEecCC-CCHHHHHHh-----------------cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---
Confidence 899999995 688776532 35689999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCC----CccccccCCccccchhccc---CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~ 324 (577)
.++.+||+|||+++...... .....+||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+....+
T Consensus 138 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~ 217 (338)
T cd07859 138 ADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQL 217 (338)
T ss_pred CCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Confidence 47899999999997643211 1234679999999998764 5688999999999999999999999776543322
Q ss_pred HHHHh---------------------------CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 325 KEVLR---------------------------NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 325 ~~i~~---------------------------~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
..+.. ..+......++.+++.+.++|.+||..||.+|||+.++|+||||+...
T Consensus 218 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~ 297 (338)
T cd07859 218 DLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLA 297 (338)
T ss_pred HHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcC
Confidence 21110 001011112356788999999999999999999999999999998765
Q ss_pred C
Q 008127 378 D 378 (577)
Q Consensus 378 ~ 378 (577)
.
T Consensus 298 ~ 298 (338)
T cd07859 298 K 298 (338)
T ss_pred c
Confidence 4
No 86
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.7e-45 Score=373.01 Aligned_cols=250 Identities=31% Similarity=0.556 Sum_probs=212.6
Q ss_pred eeecccCCeEEEEEEEc---CCCCEEEEEEecccccC-chhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 102 KLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMI-LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
+.||+|+||.||+|++. .+++.||||++.+.... .......+.+|+.+++.+ +||||++++++|..++.+|+|||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAV-KHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhC-CCCchhceeeEEecCCeEEEEEe
Confidence 57999999999999864 47889999998754321 122345678899999999 59999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
|+++|+|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+|
T Consensus 81 ~~~~~~L~~~~~~-----------------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~k 140 (323)
T cd05584 81 YLSGGELFMHLER-----------------EGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLD---AQGHVK 140 (323)
T ss_pred CCCCchHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCEE
Confidence 9999999887643 36688899999999999999999999999999999999998 478999
Q ss_pred EEecCCCcccCC-CCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008127 258 ATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335 (577)
Q Consensus 258 l~DFGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~ 335 (577)
|+|||+++.... .......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+......+..+..+...++
T Consensus 141 l~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~ 220 (323)
T cd05584 141 LTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLP 220 (323)
T ss_pred EeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 999999875332 2233456899999999988654 58899999999999999999999998888777888877654433
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 336 RKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 336 ~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
+.+++.+.+||.+||..||++|| ++.++++||||+..
T Consensus 221 ----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 221 ----PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred ----CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 45789999999999999999999 89999999999864
No 87
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=3.2e-45 Score=364.89 Aligned_cols=252 Identities=27% Similarity=0.445 Sum_probs=208.0
Q ss_pred ecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCCCc
Q 008127 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183 (577)
Q Consensus 104 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 183 (577)
||+|+||+||+|.+..+|+.||||.+...........+.+..|+.+++.+ +||||+++++++..++.+|+||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV-HSRFIVSLAYAFQTKTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhC-CCCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence 79999999999999999999999998765433333456678899999999 59999999999999999999999999999
Q ss_pred hhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCC
Q 008127 184 LLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263 (577)
Q Consensus 184 L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGl 263 (577)
|.+.+... ......+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||+
T Consensus 80 L~~~~~~~-------------~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~ 143 (280)
T cd05608 80 LRYHIYNV-------------DEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLD---NDGNVRISDLGL 143 (280)
T ss_pred HHHHHHhc-------------cccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeCcc
Confidence 98766322 11345789999999999999999999999999999999999998 478899999999
Q ss_pred CcccCCCC-CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChh----HHHHHHHhCCCCCCCC
Q 008127 264 SDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEVLRNKPDFRRK 337 (577)
Q Consensus 264 a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~----~~~~~i~~~~~~~~~~ 337 (577)
+....... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||...... .....+..... .
T Consensus 144 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~----~ 219 (280)
T cd05608 144 AVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSV----T 219 (280)
T ss_pred ceecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCC----C
Confidence 97654432 2335679999999998865 4588999999999999999999999765432 22222222221 2
Q ss_pred CCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 338 PWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 338 ~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
..+.+++.+.+++.+||+.||++|| |++++++||||+..
T Consensus 220 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~ 263 (280)
T cd05608 220 YPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDL 263 (280)
T ss_pred CcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence 2245889999999999999999999 88999999999863
No 88
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=9.3e-46 Score=377.74 Aligned_cols=250 Identities=28% Similarity=0.506 Sum_probs=212.9
Q ss_pred ecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc--CCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 104 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
||+|+||.||+|++..+|+.||||++.+..............|..++..+. +||||+++++++.....+|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999999999999999987654332334445566777777664 799999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 81 g~L~~~l~~-----------------~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~---~~~~~kl~Df 140 (330)
T cd05586 81 GELFWHLQK-----------------EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLD---ATGHIALCDF 140 (330)
T ss_pred ChHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCEEEecC
Confidence 999876643 36789999999999999999999999999999999999998 4788999999
Q ss_pred CCCcccCC-CCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCC
Q 008127 262 GLSDFIKP-GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 338 (577)
Q Consensus 262 Gla~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 338 (577)
|++..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+.+..+..+...++.
T Consensus 141 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~-- 218 (330)
T cd05586 141 GLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPK-- 218 (330)
T ss_pred CcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCC--
Confidence 99875432 233345789999999998864 3588999999999999999999999998888888888776554433
Q ss_pred CCCCCHHHHHHHHHccccCcCCCC----CHHHHhcCcccccc
Q 008127 339 WPSISNSAKDFVKKLLVKDPRARL----TAAQALSHPWVREG 376 (577)
Q Consensus 339 ~~~~s~~~~~li~~~l~~dP~~Rp----t~~~il~hp~f~~~ 376 (577)
..+++++.+||.+||..||.+|| ++.++++||||+..
T Consensus 219 -~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 219 -NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI 259 (330)
T ss_pred -ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence 34789999999999999999998 79999999999864
No 89
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=4.9e-45 Score=371.67 Aligned_cols=251 Identities=25% Similarity=0.436 Sum_probs=209.6
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.++.++.+||||+.+++++...+.+|+|||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999999999999999997654433445667889999999987899999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 81 ~~L~~~~~~-----------------~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~---~~~~~kl~Df 140 (327)
T cd05617 81 GDLMFHMQR-----------------QRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLD---ADGHIKLTDY 140 (327)
T ss_pred CcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEe---CCCCEEEecc
Confidence 999876643 36789999999999999999999999999999999999998 4788999999
Q ss_pred CCCccc-CCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCC------C-hhHHHHHHHhCCC
Q 008127 262 GLSDFI-KPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDK------T-EDGIFKEVLRNKP 332 (577)
Q Consensus 262 Gla~~~-~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~------~-~~~~~~~i~~~~~ 332 (577)
|++... .........+||+.|+|||++.+ .++.++|||||||++|+|++|..||... . .......+.....
T Consensus 141 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 220 (327)
T cd05617 141 GMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI 220 (327)
T ss_pred ccceeccCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC
Confidence 998753 22333456789999999998865 4588999999999999999999999532 1 2223333433322
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCC------HHHHhcCcccccc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLT------AAQALSHPWVREG 376 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt------~~~il~hp~f~~~ 376 (577)
.+ ...++..+.++|.+||..||.+|++ +.++++||||+..
T Consensus 221 ~~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~ 266 (327)
T cd05617 221 RI----PRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI 266 (327)
T ss_pred CC----CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence 22 2357899999999999999999998 5799999999864
No 90
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=8.9e-45 Score=370.66 Aligned_cols=260 Identities=27% Similarity=0.458 Sum_probs=218.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||+|+||.||++.++.+++.||+|++.+...........+..|+.++..+ +||+|+++++++.+.+.+|+||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCEEEEEE
Confidence 699999999999999999999999999999998654332233445688899999988 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 81 ey~~~g~L~~~l~~~----------------~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~---~~~~~ 141 (332)
T cd05623 81 DYYVGGDLLTLLSKF----------------EDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD---MNGHI 141 (332)
T ss_pred eccCCCcHHHHHHHh----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC---CCCCE
Confidence 999999999877532 35689999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCCC--ccccccCCccccchhcc------cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 257 KATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 257 kl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~------~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
||+|||++........ ....+||+.|+|||++. +.++.++|||||||++|+|++|+.||.+.+..+.+..+.
T Consensus 142 kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~ 221 (332)
T cd05623 142 RLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 221 (332)
T ss_pred EEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHh
Confidence 9999999876533222 23457999999999875 245889999999999999999999999988888888887
Q ss_pred hCCCCCCCC-CCCCCCHHHHHHHHHccccCcCC--CCCHHHHhcCcccccc
Q 008127 329 RNKPDFRRK-PWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 376 (577)
Q Consensus 329 ~~~~~~~~~-~~~~~s~~~~~li~~~l~~dP~~--Rpt~~~il~hp~f~~~ 376 (577)
.....+..+ .+..+++++.+||.+||..+|.+ |+++.++++||||+..
T Consensus 222 ~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 222 NHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred CCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence 654433221 23468999999999999765544 6899999999999864
No 91
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1e-44 Score=362.28 Aligned_cols=258 Identities=26% Similarity=0.456 Sum_probs=214.4
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
.|++.+.||+|+||.||+|.+..+++.||||.+.............+.+|+.+++++ +||+|+.+++.+...+.+|+||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhC-CCCCeeeeeEEEecCCEEEEEE
Confidence 377889999999999999999999999999998765443333455678899999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++|++|.+.+... ....+++..++.++.|++.||.|||+.+|+||||||+||+++ .++.+
T Consensus 80 e~~~g~~L~~~l~~~---------------~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~---~~~~~ 141 (285)
T cd05630 80 TLMNGGDLKFHIYHM---------------GEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLD---DHGHI 141 (285)
T ss_pred EecCCCcHHHHHHHh---------------cccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC---CCCCE
Confidence 999999998876432 234689999999999999999999999999999999999998 47789
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChh---HHHHHHHhCCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED---GIFKEVLRNKP 332 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~---~~~~~i~~~~~ 332 (577)
+|+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|+.||...... +....+.....
T Consensus 142 ~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~ 221 (285)
T cd05630 142 RISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQ 221 (285)
T ss_pred EEeeccceeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhh
Confidence 9999999987654444455689999999998864 4688999999999999999999999765432 22222222111
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCcccccc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 376 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~ 376 (577)
......+++++.+|+.+||+.||.+||| +.++++||||+..
T Consensus 222 ---~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 222 ---EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred ---hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence 1123457889999999999999999999 9999999999864
No 92
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-46 Score=373.71 Aligned_cols=263 Identities=27% Similarity=0.457 Sum_probs=227.6
Q ss_pred cccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 90 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
+.++....|.-++.||+|+||.||-|++..+.+.||||.+..+.-....-...+..|+..|++|. |||++.+-++|..+
T Consensus 20 ~k~DPEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~-HPntieYkgCyLre 98 (948)
T KOG0577|consen 20 FKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLR-HPNTIEYKGCYLRE 98 (948)
T ss_pred ccCCHHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhcc-CCCcccccceeecc
Confidence 44555667888999999999999999999999999999987665444456678999999999995 99999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
...|+|||||- |+-.|.+.- ...++-+-+++.|+.+.+.||.|||+++.||||||..||||+
T Consensus 99 ~TaWLVMEYCl-GSAsDlleV----------------hkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLs- 160 (948)
T KOG0577|consen 99 HTAWLVMEYCL-GSASDLLEV----------------HKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLS- 160 (948)
T ss_pred chHHHHHHHHh-ccHHHHHHH----------------HhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEec-
Confidence 99999999995 565554432 247889999999999999999999999999999999999998
Q ss_pred CCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcc----cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
+.+.|||+|||.|....+. ++++|||+|||||++. |.|+-++||||||++..||.-.++|+..++....+.
T Consensus 161 --e~g~VKLaDFGSAsi~~PA---nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALY 235 (948)
T KOG0577|consen 161 --EPGLVKLADFGSASIMAPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY 235 (948)
T ss_pred --CCCeeeeccccchhhcCch---hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHH
Confidence 6899999999999876543 5679999999999873 788999999999999999999999999998888777
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.|..+..+... -+.+|..++.||..||++-|.+|||++++|.|+|+....+
T Consensus 236 HIAQNesPtLq--s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp 286 (948)
T KOG0577|consen 236 HIAQNESPTLQ--SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERP 286 (948)
T ss_pred HHHhcCCCCCC--CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCC
Confidence 77766543332 2456889999999999999999999999999999986543
No 93
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=3.2e-45 Score=372.85 Aligned_cols=250 Identities=26% Similarity=0.471 Sum_probs=211.2
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHH-HHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI-LQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~-l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
+.||+|+||+||+|.+..+|+.||||++.+...........+..|..+ ++.+ +||||+++++++...+.+|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTTEKLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhC-CCCCCccEEEEEecCCEEEEEEcCCC
Confidence 369999999999999999999999999876533223344556667665 4556 69999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
+|+|...+.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|
T Consensus 80 ~~~L~~~l~~-----------------~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~---~~~~~kL~D 139 (325)
T cd05604 80 GGELFFHLQR-----------------ERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLD---SQGHVVLTD 139 (325)
T ss_pred CCCHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEEee
Confidence 9999876632 36789999999999999999999999999999999999998 478999999
Q ss_pred cCCCcccCC-CCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCC
Q 008127 261 FGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 338 (577)
Q Consensus 261 FGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 338 (577)
||++..... .......+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..+.+..++.......
T Consensus 140 fG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~--- 216 (325)
T cd05604 140 FGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR--- 216 (325)
T ss_pred cCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCC---
Confidence 999875432 2233456899999999988754 58899999999999999999999999888888888877554332
Q ss_pred CCCCCHHHHHHHHHccccCcCCCCCH----HHHhcCcccccc
Q 008127 339 WPSISNSAKDFVKKLLVKDPRARLTA----AQALSHPWVREG 376 (577)
Q Consensus 339 ~~~~s~~~~~li~~~l~~dP~~Rpt~----~~il~hp~f~~~ 376 (577)
+.++..+.++|.+||..+|.+||++ .++++||||+..
T Consensus 217 -~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 217 -PGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred -CCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence 4578999999999999999999977 599999999863
No 94
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.9e-45 Score=377.70 Aligned_cols=251 Identities=22% Similarity=0.377 Sum_probs=202.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|.+++.||+|+||.||+|.+..+++.||+|.... ..+.+|++++++| +||||++++++|......++|
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv 161 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAI-NHPSIIQLKGTFTYNKFTCLI 161 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhC-CCCCCCCEeEEEEECCeeEEE
Confidence 479999999999999999999999999999996532 3467899999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
+|++. ++|..++.. ...+++..++.++.||+.||.|||++|||||||||+|||++ .++.
T Consensus 162 ~e~~~-~~L~~~l~~-----------------~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~---~~~~ 220 (391)
T PHA03212 162 LPRYK-TDLYCYLAA-----------------KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFIN---HPGD 220 (391)
T ss_pred EecCC-CCHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEc---CCCC
Confidence 99994 688776543 35688999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCC--CCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCC-------hhHHHH
Q 008127 256 LKATDFGLSDFIKPG--KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT-------EDGIFK 325 (577)
Q Consensus 256 vkl~DFGla~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~-------~~~~~~ 325 (577)
+||+|||+|...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.... ....+.
T Consensus 221 vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~ 300 (391)
T PHA03212 221 VCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIK 300 (391)
T ss_pred EEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHH
Confidence 999999999754321 23345689999999998865 46889999999999999999998875432 111111
Q ss_pred HHHhCC--------------------------CC--CCCCCC---CCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q 008127 326 EVLRNK--------------------------PD--FRRKPW---PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374 (577)
Q Consensus 326 ~i~~~~--------------------------~~--~~~~~~---~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~ 374 (577)
.++... .. .....| ..++.++.+||.+||+.||.+|||+.++|+||||+
T Consensus 301 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~ 380 (391)
T PHA03212 301 LIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQ 380 (391)
T ss_pred HHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhc
Confidence 111100 00 001111 13466899999999999999999999999999998
Q ss_pred ccC
Q 008127 375 EGG 377 (577)
Q Consensus 375 ~~~ 377 (577)
...
T Consensus 381 ~~~ 383 (391)
T PHA03212 381 DIP 383 (391)
T ss_pred cCC
Confidence 754
No 95
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.1e-44 Score=369.74 Aligned_cols=261 Identities=26% Similarity=0.461 Sum_probs=218.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||++++..+++.||+|++.+...........+..|+.++..+ +||||+++++++..++.+|+|
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~l~~~~~~~~~~~lv 79 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNG-DCQWITTLHYAFQDENYLYLV 79 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEE
Confidence 3699999999999999999999999999999998764332233455678899999888 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++||+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 80 ~Ey~~gg~L~~~l~~~----------------~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~---~~~~ 140 (331)
T cd05624 80 MDYYVGGDLLTLLSKF----------------EDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLD---MNGH 140 (331)
T ss_pred EeCCCCCcHHHHHHHh----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEc---CCCC
Confidence 9999999999877532 35689999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCCCc--cccccCCccccchhccc------CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 256 LKATDFGLSDFIKPGKKF--QDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~~~~------~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
+||+|||++......... ...+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+
T Consensus 141 ~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i 220 (331)
T cd05624 141 IRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 220 (331)
T ss_pred EEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHH
Confidence 999999999766433222 23579999999998863 4578999999999999999999999988887777777
Q ss_pred HhCCCCCCC-CCCCCCCHHHHHHHHHccccCcCC--CCCHHHHhcCcccccc
Q 008127 328 LRNKPDFRR-KPWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 376 (577)
Q Consensus 328 ~~~~~~~~~-~~~~~~s~~~~~li~~~l~~dP~~--Rpt~~~il~hp~f~~~ 376 (577)
......+.. ..+..+++++.+||.+||..++.+ |+++.++++||||+..
T Consensus 221 ~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 221 MNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred HcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence 765433322 223567899999999999976554 5699999999999863
No 96
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-46 Score=368.81 Aligned_cols=264 Identities=34% Similarity=0.581 Sum_probs=235.7
Q ss_pred cccceee--eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 94 FDRRYTI--GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 94 ~~~~y~~--~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
+..-|+| .+.||.|.||.||-|.++++|+.||||+|.+-++-. .....+++|+.||+.+ +||.||.+---|+..+.
T Consensus 560 ~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~-kqesqlR~EVaILq~l-~HPGiV~le~M~ET~er 637 (888)
T KOG4236|consen 560 ISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPT-KQESQLRNEVAILQNL-HHPGIVNLECMFETPER 637 (888)
T ss_pred HHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCC-chHHHHHHHHHHHHhc-CCCCeeEEEEeecCCce
Confidence 4445776 468999999999999999999999999999877643 3457899999999999 59999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+++|||-+ .|+.++.|+.. ..++|++.....++.||+.||.|||-++|+|+||||+||||.+.+
T Consensus 638 vFVVMEKl-~GDMLEMILSs---------------EkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~ 701 (888)
T KOG4236|consen 638 VFVVMEKL-HGDMLEMILSS---------------EKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASAS 701 (888)
T ss_pred EEEEehhh-cchHHHHHHHh---------------hcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCC
Confidence 99999999 56888877543 468999999999999999999999999999999999999999877
Q ss_pred CCCCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 252 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
.-..+||||||+|+.+....-....+|||.|+|||++..+ |+..-|+||.|||+|--++|..||.. .+++-.+|...
T Consensus 702 ~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE--dEdIndQIQNA 779 (888)
T KOG4236|consen 702 PFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE--DEDINDQIQNA 779 (888)
T ss_pred CCCceeeccccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC--ccchhHHhhcc
Confidence 7789999999999999877666788999999999999765 57778999999999999999999943 34567778888
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
..-++..+|..+++++.+||..+|+..-.+|.|.+..|.|||+++++
T Consensus 780 aFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq 826 (888)
T KOG4236|consen 780 AFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQ 826 (888)
T ss_pred ccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcch
Confidence 88889999999999999999999999999999999999999999864
No 97
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.9e-44 Score=368.15 Aligned_cols=258 Identities=26% Similarity=0.370 Sum_probs=212.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|++..+|..||+|.+.... .+.....+.+|+++++.+ +||||+++++++..++.+++|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 81 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISIC 81 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEE
Confidence 57999999999999999999999999999999986542 234567799999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-CceeccCCCCcEEeecCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~-~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++ .++
T Consensus 82 ~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~---~~~ 141 (331)
T cd06649 82 MEHMDGGSLDQVLKE-----------------AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVN---SRG 141 (331)
T ss_pred eecCCCCcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEc---CCC
Confidence 999999999887643 25689999999999999999999986 699999999999998 478
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC--
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK-- 331 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~-- 331 (577)
.+||+|||++...... ......||+.|+|||++.+. ++.++|||||||++|+|++|+.||......+....+-...
T Consensus 142 ~~kl~Dfg~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 220 (331)
T cd06649 142 EIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVD 220 (331)
T ss_pred cEEEccCccccccccc-ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccc
Confidence 8999999999765432 23456799999999988754 6889999999999999999999997655443322111000
Q ss_pred ------------------------------------------CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 332 ------------------------------------------PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 332 ------------------------------------------~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
...+......+++++.+||.+||..||++|||+.++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~ 300 (331)
T cd06649 221 GEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMN 300 (331)
T ss_pred cccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00001111236789999999999999999999999999
Q ss_pred CccccccC
Q 008127 370 HPWVREGG 377 (577)
Q Consensus 370 hp~f~~~~ 377 (577)
||||+...
T Consensus 301 h~~~~~~~ 308 (331)
T cd06649 301 HTFIKRSE 308 (331)
T ss_pred ChHHhhcc
Confidence 99998643
No 98
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.4e-44 Score=361.87 Aligned_cols=257 Identities=26% Similarity=0.406 Sum_probs=207.3
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc--CCCCeeEEEEEEEc-----C
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFED-----D 169 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~-----~ 169 (577)
+|++.+.||+|+||.||+|.++.+|+.||+|.+...... ......+.+|+.+++.+. +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE-DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC-CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 589999999999999999999999999999998654321 112234567888877764 59999999998864 3
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
..+++||||++ ++|.+.+... ....+++..++.++.||+.||.|||+.||+||||||+|||++
T Consensus 80 ~~~~lv~e~~~-~~l~~~~~~~---------------~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~- 142 (288)
T cd07863 80 TKVTLVFEHVD-QDLRTYLDKV---------------PPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT- 142 (288)
T ss_pred ceEEEEEcccc-cCHHHHHHhc---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC-
Confidence 46899999997 4787765432 234589999999999999999999999999999999999998
Q ss_pred CCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
.++.+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|++||.+....+.+..+.
T Consensus 143 --~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~ 220 (288)
T cd07863 143 --SGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF 220 (288)
T ss_pred --CCCCEEECccCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHH
Confidence 478899999999987654444455678999999998764 46889999999999999999999998877766655554
Q ss_pred hCCCC----------------CC-------CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 329 RNKPD----------------FR-------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 329 ~~~~~----------------~~-------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
..... +. ....+.++..+.+||.+||+.||++|||+.+++.||||
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 221 DLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred HHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 31100 00 01124577889999999999999999999999999998
No 99
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=7.8e-45 Score=370.05 Aligned_cols=250 Identities=27% Similarity=0.469 Sum_probs=209.7
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHH-HHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI-LQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~-l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
+.||+|+||.||+|++..+++.||+|++.+...........+..|... ++.+ +||||+++++++...+.+|+||||++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~Iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQTADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhC-CCCCCCceeEEEEcCCeEEEEEeCCC
Confidence 369999999999999999999999999876433222233445555554 5566 69999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
+|+|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|
T Consensus 80 ~~~L~~~~~~-----------------~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~---~~~~~kl~D 139 (325)
T cd05602 80 GGELFYHLQR-----------------ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD---SQGHIVLTD 139 (325)
T ss_pred CCcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEEcc
Confidence 9999886643 35688999999999999999999999999999999999998 478899999
Q ss_pred cCCCcccC-CCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCC
Q 008127 261 FGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 338 (577)
Q Consensus 261 FGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 338 (577)
||++.... ........+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..+.+..+......+
T Consensus 140 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~---- 215 (325)
T cd05602 140 FGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL---- 215 (325)
T ss_pred CCCCcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCC----
Confidence 99997543 22334456899999999988754 5889999999999999999999999988888888877654332
Q ss_pred CCCCCHHHHHHHHHccccCcCCCCCHH----HHhcCcccccc
Q 008127 339 WPSISNSAKDFVKKLLVKDPRARLTAA----QALSHPWVREG 376 (577)
Q Consensus 339 ~~~~s~~~~~li~~~l~~dP~~Rpt~~----~il~hp~f~~~ 376 (577)
.+.+++.+.++|.+||+.||.+||++. ++++|+||...
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~ 257 (325)
T cd05602 216 KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI 257 (325)
T ss_pred CCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence 356889999999999999999999876 89999999753
No 100
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=7.3e-45 Score=374.54 Aligned_cols=256 Identities=27% Similarity=0.398 Sum_probs=208.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|++++.||+|+||.||+|.+..+|+.||||++.... .......+.+|+.+++.+ +||||+++++++...+.+|+|
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 150 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDV-NHPNVVKCHDMFDHNGEIQVL 150 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhC-CCCCcceeeeEeccCCeEEEE
Confidence 46888999999999999999999999999999986543 233456789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||.+|+|.+. ...++..+..++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 151 ~e~~~~~~L~~~---------------------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~~~ 206 (353)
T PLN00034 151 LEFMDGGSLEGT---------------------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLIN---SAKN 206 (353)
T ss_pred EecCCCCccccc---------------------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc---CCCC
Confidence 999999988541 3356777889999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCC-CccccccCCccccchhccc-----C-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 256 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-----K-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 256 vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~-----~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
+||+|||++..+.... .....+||..|+|||++.. . .+.++|||||||++|+|++|+.||......+....+.
T Consensus 207 ~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~ 286 (353)
T PLN00034 207 VKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMC 286 (353)
T ss_pred EEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHH
Confidence 9999999998764322 2345689999999998743 2 2568999999999999999999997443332222211
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.............++.++.+||.+||..||++|||+.++|+||||.....
T Consensus 287 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~~ 336 (353)
T PLN00034 287 AICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQP 336 (353)
T ss_pred HHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCCc
Confidence 11111122223467899999999999999999999999999999998643
No 101
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-45 Score=373.63 Aligned_cols=255 Identities=35% Similarity=0.611 Sum_probs=234.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
..|.+...||+|.|++|.+|++..++..||||.|++...... ..+.+.+|+++|+.| +|||||+++.+.+....+|+|
T Consensus 56 g~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~-~~~k~~rev~imk~l-~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 56 GLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPS-KRQKLGREVDIMKSL-NHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChH-HHHHHHHHHHHHHhc-CCcceeeeeeeeeecceeEEE
Confidence 469999999999999999999999999999999988776443 455689999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+.+|++++++.+. ++..+..++.++.|++.|++|||+++|||||||++||||+ .+.+
T Consensus 134 ~eya~~ge~~~yl~~~-----------------gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~---~~mn 193 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKH-----------------GRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLD---ENMN 193 (596)
T ss_pred EEeccCchhHHHHHhc-----------------ccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccc---cccc
Confidence 9999999999988644 7888899999999999999999999999999999999998 4778
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcccCC--CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+||+|||++.++..+....++||++.|.|||++.+.. ++.+|+||+|++||-|+.|..||.+.+..+....++.++..
T Consensus 194 ikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~r 273 (596)
T KOG0586|consen 194 IKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYR 273 (596)
T ss_pred eeeeccccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeec
Confidence 9999999999999888889999999999999998753 89999999999999999999999999999988888888776
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.+. .++.++.++|+++|..+|.+|++.+++..|.|....
T Consensus 274 Ip~----~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 274 IPF----YMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDL 312 (596)
T ss_pred ccc----eeechhHHHHHHhhccCccccCCHHHhhhhcccchh
Confidence 664 367899999999999999999999999999997653
No 102
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.6e-44 Score=358.34 Aligned_cols=260 Identities=28% Similarity=0.452 Sum_probs=217.5
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
|++.+.||.|+||+||+|.+..+++.||+|.+.............+.+|+++++.+ +||||+.+++++..++..|+|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKV-NSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHc-CCcCceeEEEEEecCCEEEEEEE
Confidence 77889999999999999999999999999998765433333445678899999999 59999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
|+++++|.+.+... ....+++..+..++.|++.||.|||+.||+||||||+||+++ .++.+|
T Consensus 81 ~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~---~~~~~k 142 (285)
T cd05632 81 IMNGGDLKFHIYNM---------------GNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLD---DYGHIR 142 (285)
T ss_pred eccCccHHHHHHHh---------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEC---CCCCEE
Confidence 99999998766432 234689999999999999999999999999999999999998 467899
Q ss_pred EEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008127 258 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336 (577)
Q Consensus 258 l~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~ 336 (577)
|+|||++.............|++.|+|||++.+ .++.++|+|||||++|+|++|..||.+.........+.........
T Consensus 143 l~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~ 222 (285)
T cd05632 143 ISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEE 222 (285)
T ss_pred EecCCcceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcccc
Confidence 999999976654444455689999999998754 4688999999999999999999999877665444444332222222
Q ss_pred CCCCCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCcccccc
Q 008127 337 KPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 376 (577)
Q Consensus 337 ~~~~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~ 376 (577)
...+.++.++.+|+.+||..||++||| +.+++.||||+..
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 223 VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence 233568899999999999999999999 8999999999875
No 103
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-46 Score=377.17 Aligned_cols=259 Identities=31% Similarity=0.471 Sum_probs=224.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
+.|.|+..||.|+||+||+|.++.++-..|.|+|.-.. ....+.+.-||+||..+ +||+||++++.|..++.+||+
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetks---eEELEDylVEIeILa~C-dHP~ivkLl~ayy~enkLwil 107 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKS---EEELEDYLVEIEILAEC-DHPVIVKLLSAYYFENKLWIL 107 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccc---hhHHhhhhhhhhhhhcC-CChHHHHHHHHHhccCceEEE
Confidence 45788889999999999999999999888999986543 46788899999999998 699999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
.|||.||-+...+.. -...|++.++..+++|+|.||.|||+++|||||||..|||++. +|.
T Consensus 108 iEFC~GGAVDaimlE----------------L~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tl---dGd 168 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIMLE----------------LGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTL---DGD 168 (1187)
T ss_pred EeecCCchHhHHHHH----------------hccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEe---cCc
Confidence 999999987665543 3578999999999999999999999999999999999999994 789
Q ss_pred eeEEecCCCcccC-CCCCccccccCCccccchhcc------cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 256 LKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 256 vkl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
|+|+|||.+.... .......++|||+|||||+.. ..|..++||||||++|.||.-+.+|-..-++..++.+|.
T Consensus 169 irLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKia 248 (1187)
T KOG0579|consen 169 IRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA 248 (1187)
T ss_pred EeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHh
Confidence 9999999886543 223446789999999999863 346889999999999999999999998889988888888
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
+..++.... +..++..+.||+++||.+||..||++.++|+||||+....
T Consensus 249 KSePPTLlq-PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~S 297 (1187)
T KOG0579|consen 249 KSEPPTLLQ-PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPS 297 (1187)
T ss_pred hcCCCcccC-cchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCc
Confidence 766554322 2456789999999999999999999999999999997644
No 104
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.2e-44 Score=368.12 Aligned_cols=250 Identities=26% Similarity=0.462 Sum_probs=209.5
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHH-HHHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK-ILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~-~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
+.||+|+||.||+|++..+|+.||+|++.+...........+.+|+. +++.+ +||||+++++++...+.+|+|||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNL-KHPFLVGLHYSFQTAEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhC-CCCCccceeeEEEcCCEEEEEEcCCC
Confidence 36999999999999999999999999987654322333455666665 46667 69999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
+|+|...+.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|
T Consensus 80 ~~~L~~~l~~-----------------~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~---~~~~~kl~D 139 (321)
T cd05603 80 GGELFFHLQR-----------------ERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLD---SQGHVVLTD 139 (321)
T ss_pred CCCHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCEEEcc
Confidence 9999776532 36788999999999999999999999999999999999998 478999999
Q ss_pred cCCCcccC-CCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCC
Q 008127 261 FGLSDFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 338 (577)
Q Consensus 261 FGla~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 338 (577)
||++.... ........+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+....+..+......++
T Consensus 140 fg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~--- 216 (321)
T cd05603 140 FGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP--- 216 (321)
T ss_pred CCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCC---
Confidence 99987532 2223345689999999998865 458899999999999999999999999888888887776544332
Q ss_pred CCCCCHHHHHHHHHccccCcCCCCCH----HHHhcCcccccc
Q 008127 339 WPSISNSAKDFVKKLLVKDPRARLTA----AQALSHPWVREG 376 (577)
Q Consensus 339 ~~~~s~~~~~li~~~l~~dP~~Rpt~----~~il~hp~f~~~ 376 (577)
+..+..+.++|.+||+.||.+||++ .++++||||...
T Consensus 217 -~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~ 257 (321)
T cd05603 217 -GGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI 257 (321)
T ss_pred -CCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence 4578899999999999999999975 599999999753
No 105
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=7.1e-45 Score=369.28 Aligned_cols=249 Identities=29% Similarity=0.520 Sum_probs=213.1
Q ss_pred eeecccCCeEEEEEEE---cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEec
Q 008127 102 KLLGHGQFGYTYVATD---KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~---~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~ 178 (577)
+.||+|+||.||++++ ..+|+.||+|++.+.... ......+.+|+.+++++ +||||+++++++..++.+|+||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK-VRDRVRTKMERDILAEV-NHPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCEEEEEEcC
Confidence 5799999999999986 357899999998764321 22345677899999999 599999999999999999999999
Q ss_pred cCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeE
Q 008127 179 CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 258 (577)
Q Consensus 179 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl 258 (577)
+++|+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 80 ~~~~~L~~~l~~-----------------~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kL 139 (318)
T cd05582 80 LRGGDLFTRLSK-----------------EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD---EEGHIKL 139 (318)
T ss_pred CCCCcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEEC---CCCcEEE
Confidence 999999887643 35689999999999999999999999999999999999998 4788999
Q ss_pred EecCCCcccCCC-CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008127 259 TDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336 (577)
Q Consensus 259 ~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~ 336 (577)
+|||++...... ......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+....+.+..+......++
T Consensus 140 ~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p- 218 (318)
T cd05582 140 TDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMP- 218 (318)
T ss_pred eeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCC-
Confidence 999999765433 233456899999999998754 58899999999999999999999998888888888776654433
Q ss_pred CCCCCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCcccccc
Q 008127 337 KPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 376 (577)
Q Consensus 337 ~~~~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~ 376 (577)
..+++.+.+||.+||+.||.+||| +.+++.||||+..
T Consensus 219 ---~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 219 ---QFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred ---CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence 357899999999999999999999 7889999999864
No 106
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=4.6e-44 Score=381.90 Aligned_cols=260 Identities=25% Similarity=0.336 Sum_probs=203.1
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc-----CCCCeeEEEEEEEcC
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA-----GHENVVKFYNAFEDD 169 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~-----~hpniv~~~~~~~~~ 169 (577)
..+|+++++||+|+||.||+|.+..+++.||||++.... .....+..|+.+++.+. +|+++++++++|..+
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~ 203 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE 203 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence 468999999999999999999999999999999986432 23445667888887774 345689999988764
Q ss_pred -CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEe
Q 008127 170 -NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLF 247 (577)
Q Consensus 170 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl 247 (577)
+++|+|||++ |++|.+++.. ...+++..++.++.||+.||.|||+ .|||||||||+|||+
T Consensus 204 ~~~~~iv~~~~-g~~l~~~l~~-----------------~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl 265 (467)
T PTZ00284 204 TGHMCIVMPKY-GPCLLDWIMK-----------------HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILM 265 (467)
T ss_pred CceEEEEEecc-CCCHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEE
Confidence 5799999998 7788876643 3678999999999999999999998 599999999999999
Q ss_pred ecCC-------------CCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCC
Q 008127 248 KSAK-------------EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRR 313 (577)
Q Consensus 248 ~~~~-------------~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~ 313 (577)
+..+ +...+||+|||++.... ......+||+.|+|||++.+ .++.++|||||||++|||++|++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~--~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~ 343 (467)
T PTZ00284 266 ETSDTVVDPVTNRALPPDPCRVRICDLGGCCDER--HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKL 343 (467)
T ss_pred ecCCcccccccccccCCCCceEEECCCCccccCc--cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 8422 11259999999886432 22345789999999998865 46889999999999999999999
Q ss_pred CCCCCChhHHHHHHHhCCCCCCC----------------------C--------------CCC--CCCHHHHHHHHHccc
Q 008127 314 PFWDKTEDGIFKEVLRNKPDFRR----------------------K--------------PWP--SISNSAKDFVKKLLV 355 (577)
Q Consensus 314 Pf~~~~~~~~~~~i~~~~~~~~~----------------------~--------------~~~--~~s~~~~~li~~~l~ 355 (577)
||.+.+..+.+..+......++. . .+. ..++.+.+||.+||+
T Consensus 344 pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~ 423 (467)
T PTZ00284 344 LYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLH 423 (467)
T ss_pred CCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCC
Confidence 99877665544433221110000 0 000 013457899999999
Q ss_pred cCcCCCCCHHHHhcCccccccCC
Q 008127 356 KDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 356 ~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
+||.+|||+.|+|+||||+....
T Consensus 424 ~dP~~R~ta~e~L~Hp~~~~~~~ 446 (467)
T PTZ00284 424 YDRQKRLNARQMTTHPYVLKYYP 446 (467)
T ss_pred cChhhCCCHHHHhcCccccccCC
Confidence 99999999999999999998654
No 107
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=3.1e-44 Score=357.25 Aligned_cols=251 Identities=27% Similarity=0.423 Sum_probs=207.0
Q ss_pred ecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCCCc
Q 008127 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183 (577)
Q Consensus 104 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 183 (577)
||+|+||.||++.++.+|+.||+|.+.............+..|+++++.+ +||||+++++++..+..+|+||||++|++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKV-NSPFIVNLAYAFESKTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhc-CCCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence 79999999999999999999999998754432222344566799999999 59999999999999999999999999999
Q ss_pred hhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCC
Q 008127 184 LLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263 (577)
Q Consensus 184 L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGl 263 (577)
|.+.+... ....+++..+..++.||+.||.|||+.||+||||||+||+++ .++.++|+|||+
T Consensus 80 L~~~~~~~---------------~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~---~~~~~~l~Dfg~ 141 (277)
T cd05607 80 LKYHIYNV---------------GERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLD---DQGNCRLSDLGL 141 (277)
T ss_pred HHHHHHhc---------------cccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEc---CCCCEEEeecee
Confidence 98766432 234588899999999999999999999999999999999998 478899999999
Q ss_pred CcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCCh----hHHHHHHHhCCCCCCCCC
Q 008127 264 SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEVLRNKPDFRRKP 338 (577)
Q Consensus 264 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~----~~~~~~i~~~~~~~~~~~ 338 (577)
+.............||+.|+|||++.+ .++.++|||||||++|+|++|+.||..... .++..........+ .
T Consensus 142 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~ 218 (277)
T cd05607 142 AVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF---E 218 (277)
T ss_pred eeecCCCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc---c
Confidence 987655444445679999999998764 468899999999999999999999976433 23333333332222 2
Q ss_pred CCCCCHHHHHHHHHccccCcCCCCCH----HHHhcCcccccc
Q 008127 339 WPSISNSAKDFVKKLLVKDPRARLTA----AQALSHPWVREG 376 (577)
Q Consensus 339 ~~~~s~~~~~li~~~l~~dP~~Rpt~----~~il~hp~f~~~ 376 (577)
...+++++.+||.+||..||.+||++ ++++.||||+..
T Consensus 219 ~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~ 260 (277)
T cd05607 219 HQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTI 260 (277)
T ss_pred cccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCC
Confidence 24578999999999999999999999 778899999864
No 108
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.2e-44 Score=364.27 Aligned_cols=260 Identities=25% Similarity=0.430 Sum_probs=212.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|.+.+.||+|+||.||+|+++.+++.||+|.+..... ......+.+|+.+++++ +||||+++++++..++.+|+|
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDL-KHANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhC-CCCCcceEEEEEeeCCeEEEE
Confidence 469999999999999999999999999999999865432 12334577899999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++ +|.+.+... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 83 ~e~~~~-~l~~~~~~~----------------~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~---~~~~ 142 (309)
T cd07872 83 FEYLDK-DLKQYMDDC----------------GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLIN---ERGE 142 (309)
T ss_pred EeCCCC-CHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCC
Confidence 999974 777655322 34578999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+||+|||++...... .......+|+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+....+.....
T Consensus 143 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 222 (309)
T cd07872 143 LKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLG 222 (309)
T ss_pred EEECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 999999999764322 22334578999999998754 458899999999999999999999988776655544432111
Q ss_pred C-------------------CCC-------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 333 D-------------------FRR-------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 333 ~-------------------~~~-------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
. ++. ...+.+++++.+||.+||..||.+|||+.++++||||+....
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~ 294 (309)
T cd07872 223 TPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLGT 294 (309)
T ss_pred CCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhccc
Confidence 0 000 112357889999999999999999999999999999997543
No 109
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=6e-44 Score=392.61 Aligned_cols=270 Identities=27% Similarity=0.476 Sum_probs=220.7
Q ss_pred ccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--
Q 008127 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-- 168 (577)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-- 168 (577)
.+.+..+|++++.||.|+||.||+|.+..++..||+|.+..... .......+..|+.++..|. |||||+++++|..
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l-~e~~~~~~~~EI~IL~~L~-HPNIVrl~d~f~de~ 85 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVMRELK-HKNIVRYIDRFLNKA 85 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc-CHHHHHHHHHHHHHHHHcC-CCCcCeEEEEEEecC
Confidence 34455689999999999999999999999999999999876543 2335677899999999995 9999999998854
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-------CceeccCC
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH-------GLVHRDMK 241 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~-------~iiHrDlK 241 (577)
...+|||||||++|+|.+.|... ......+++..++.|+.||+.||.|||+. +|||||||
T Consensus 86 ~~~lyIVMEY~~gGSL~~lL~k~-------------~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLK 152 (1021)
T PTZ00266 86 NQKLYILMEFCDAGDLSRNIQKC-------------YKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLK 152 (1021)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHH-------------hhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCc
Confidence 46799999999999999887543 11235789999999999999999999985 49999999
Q ss_pred CCcEEeecC--------------CCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc---CCCCCCchhhHHHH
Q 008127 242 PENFLFKSA--------------KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVI 304 (577)
Q Consensus 242 p~NILl~~~--------------~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwSlG~i 304 (577)
|+||||+.. +....+||+|||++..+.........+||+.|+|||++.+ .++.++||||||||
T Consensus 153 PeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~I 232 (1021)
T PTZ00266 153 PQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCI 232 (1021)
T ss_pred HHHeEeecCccccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHH
Confidence 999999641 1234699999999987654444456689999999998853 35789999999999
Q ss_pred HHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 305 TYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 305 l~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
||+|++|..||........+...+...+.+ +.+..+.++.+||..||..+|.+||++.++|.||||+....
T Consensus 233 LYELLTGk~PF~~~~~~~qli~~lk~~p~l---pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~~ 303 (1021)
T PTZ00266 233 IYELCSGKTPFHKANNFSQLISELKRGPDL---PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVGP 303 (1021)
T ss_pred HHHHHHCCCCCCcCCcHHHHHHHHhcCCCC---CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcCC
Confidence 999999999998765554444444433322 23457899999999999999999999999999999986543
No 110
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=6.9e-44 Score=380.68 Aligned_cols=258 Identities=28% Similarity=0.458 Sum_probs=220.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcCC-CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKAN-GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~-~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
..|.+.+.||+|+||.||+|.+..+ +..||+|.+.... ......+.+|+.+++.+ +|||||++++++...+.+||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~---~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~l 142 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND---ERQAAYARSELHCLAAC-DHFGIVKHFDDFKSDDKLLL 142 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC---HHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEECCEEEE
Confidence 4599999999999999999998877 7889999775432 33456678899999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||++||+|.+.+... ......+++..+..++.||+.||.|||+++|+||||||+|||++ .++
T Consensus 143 v~E~~~gg~L~~~l~~~-------------~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~---~~~ 206 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQR-------------LKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLM---PTG 206 (478)
T ss_pred EEECCCCCCHHHHHHHH-------------HhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEEC---CCC
Confidence 99999999999877542 12345789999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCC---CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 255 SLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
.+||+|||+++...... .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+++..++.+
T Consensus 207 ~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~ 286 (478)
T PTZ00267 207 IIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYG 286 (478)
T ss_pred cEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence 89999999998764332 13456799999999988654 688999999999999999999999988888888887765
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.... ....++.++.+||.+||..||++||++.+++.|||++..
T Consensus 287 ~~~~---~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~~ 329 (478)
T PTZ00267 287 KYDP---FPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYV 329 (478)
T ss_pred CCCC---CCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHHH
Confidence 4321 124578999999999999999999999999999999753
No 111
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.8e-44 Score=370.20 Aligned_cols=259 Identities=30% Similarity=0.453 Sum_probs=207.2
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC---
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN--- 170 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--- 170 (577)
+.++|++.+.||+|+||.||+|.+..+|+.||||++..... .......+.+|+.+++.+ +||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 96 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ-NQTHAKRAYRELVLLKCV-NHKNIISLLNVFTPQKSLE 96 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc-chhHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCCcc
Confidence 44689999999999999999999999999999999865422 223456778999999999 5999999999986543
Q ss_pred ---eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 171 ---YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 171 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
.+|+||||+.+ +|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 97 ~~~~~~lv~e~~~~-~l~~~~~-------------------~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~ 156 (359)
T cd07876 97 EFQDVYLVMELMDA-NLCQVIH-------------------MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 156 (359)
T ss_pred ccceeEEEEeCCCc-CHHHHHh-------------------ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE
Confidence 57999999965 5554331 347888999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
+ .++.+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+....+..
T Consensus 157 ~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~ 233 (359)
T cd07876 157 K---SDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNK 233 (359)
T ss_pred C---CCCCEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 8 478999999999986654444456789999999998865 468899999999999999999999987654433322
Q ss_pred HH----------------------hCCCCCCCCC----------------CCCCCHHHHHHHHHccccCcCCCCCHHHHh
Q 008127 327 VL----------------------RNKPDFRRKP----------------WPSISNSAKDFVKKLLVKDPRARLTAAQAL 368 (577)
Q Consensus 327 i~----------------------~~~~~~~~~~----------------~~~~s~~~~~li~~~l~~dP~~Rpt~~~il 368 (577)
+. ...+.++... ....++.+.+||.+||..||++|||+.++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l 313 (359)
T cd07876 234 VIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEAL 313 (359)
T ss_pred HHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHh
Confidence 21 1111111100 012356789999999999999999999999
Q ss_pred cCccccccC
Q 008127 369 SHPWVREGG 377 (577)
Q Consensus 369 ~hp~f~~~~ 377 (577)
+||||+...
T Consensus 314 ~hp~~~~~~ 322 (359)
T cd07876 314 RHPYITVWY 322 (359)
T ss_pred cCchhhhhc
Confidence 999998643
No 112
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=9.8e-44 Score=379.70 Aligned_cols=263 Identities=27% Similarity=0.459 Sum_probs=222.2
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC--
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-- 170 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-- 170 (577)
....+|.+.+.||+|+||.||+|.+..+|+.||||++..... .......+.+|+.++..+ +|+||+++++.+....
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~-~h~~iv~~~~~~~~~~~~ 106 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNC-DFFSIVKCHEDFAKKDPR 106 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHhcC-CCCcEEEeecceeccccc
Confidence 345689999999999999999999999999999999876543 234566788999999998 5999999988775322
Q ss_pred ------eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCc
Q 008127 171 ------YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 244 (577)
Q Consensus 171 ------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~N 244 (577)
.+++||||+++|+|.+.+... ......+++..++.++.||+.||.|||+.+|+||||||+|
T Consensus 107 ~~~~~~~i~lV~Ey~~~gsL~~~l~~~-------------~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~N 173 (496)
T PTZ00283 107 NPENVLMIALVLDYANAGDLRQEIKSR-------------AKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSAN 173 (496)
T ss_pred CcccceEEEEEEeCCCCCcHHHHHHHh-------------hccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHH
Confidence 478999999999999887543 1234578999999999999999999999999999999999
Q ss_pred EEeecCCCCCCeeEEecCCCcccCCC---CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCCh
Q 008127 245 FLFKSAKEDSSLKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTE 320 (577)
Q Consensus 245 ILl~~~~~~~~vkl~DFGla~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~ 320 (577)
||++ .++.+||+|||+++..... ......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+.
T Consensus 174 ILl~---~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~ 250 (496)
T PTZ00283 174 ILLC---SNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM 250 (496)
T ss_pred EEEe---CCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH
Confidence 9998 4789999999999765432 223456899999999998754 68899999999999999999999998888
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.+.+..++.+.... ..+.+++++.+|+.+||..||.+||++.++++|||++..
T Consensus 251 ~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~ 303 (496)
T PTZ00283 251 EEVMHKTLAGRYDP---LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLF 303 (496)
T ss_pred HHHHHHHhcCCCCC---CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHh
Confidence 88888777654332 235688999999999999999999999999999998864
No 113
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-47 Score=350.08 Aligned_cols=262 Identities=26% Similarity=0.470 Sum_probs=222.9
Q ss_pred ccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
.+...+-|.++.+||+|+||.||+|.++.+|..+|||.+.... ..+++..|+.|+++. ..|++|++|+.|-...
T Consensus 28 ~K~PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s-----DLQEIIKEISIMQQC-~S~yVVKYYGSYFK~s 101 (502)
T KOG0574|consen 28 NKPPEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT-----DLQEIIKEISIMQQC-KSKYVVKYYGSYFKHS 101 (502)
T ss_pred cCChHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc-----hHHHHHHHHHHHHHc-CCchhhhhhhhhccCC
Confidence 3445567999999999999999999999999999999987653 678899999999998 5999999999998888
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+|||||||..|++.|.+.. ++.+|++.++..+++.-+.||+|||...-||||||..||||+
T Consensus 102 DLWIVMEYCGAGSiSDI~R~----------------R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLN-- 163 (502)
T KOG0574|consen 102 DLWIVMEYCGAGSISDIMRA----------------RRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLN-- 163 (502)
T ss_pred ceEeehhhcCCCcHHHHHHH----------------hcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEc--
Confidence 99999999999999997753 358899999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCC-CCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
.+++.||+|||.|..+.+. ...++.+|||.|||||++.. .|..++||||||++..||..|++||.+-.+....-.|-
T Consensus 164 -T~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIP 242 (502)
T KOG0574|consen 164 -TDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIP 242 (502)
T ss_pred -ccchhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEecc
Confidence 4899999999999876543 23467899999999999875 68999999999999999999999997655433222222
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
...+. .......+|.++.+||+.||.++|++|-||.++++|||++....
T Consensus 243 T~PPP-TF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g 291 (502)
T KOG0574|consen 243 TKPPP-TFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPG 291 (502)
T ss_pred CCCCC-CCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCc
Confidence 22221 12222456889999999999999999999999999999998654
No 114
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-44 Score=331.07 Aligned_cols=261 Identities=25% Similarity=0.397 Sum_probs=223.2
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+.+++..||.|+.|.||+++.+.+|...|||.+.+... ....+.+++.++++..-.++|+||+.+++|..+..++|.|
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~N--kee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcM 170 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICM 170 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCC--HHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHH
Confidence 35567789999999999999999999999999987653 4567788899998877656899999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCCC
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|.|. .-.+.|+.. -.++++|..+-.+...++.||.||.. +||||||+||+|||++ +.|+
T Consensus 171 elMs--~C~ekLlkr---------------ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlD---e~Gn 230 (391)
T KOG0983|consen 171 ELMS--TCAEKLLKR---------------IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD---ERGN 230 (391)
T ss_pred HHHH--HHHHHHHHH---------------hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEc---cCCC
Confidence 9984 344544433 24679999999999999999999986 6999999999999999 6899
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhccc----CCCCCCchhhHHHHHHHHHhCCCCCCCC-ChhHHHHHHHhC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLRN 330 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwSlG~il~el~tg~~Pf~~~-~~~~~~~~i~~~ 330 (577)
|||||||++..+.++.......|.+.|||||.+.. +|...+||||||+.|+||+||..||.+. ++.+++..++..
T Consensus 231 iKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ 310 (391)
T KOG0983|consen 231 IKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNE 310 (391)
T ss_pred EEeecccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhc
Confidence 99999999998887777778899999999999863 4678899999999999999999999874 567888888886
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCC
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 380 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~ 380 (577)
.+.... .-..+|+.+++|+..||++|+.+||...++|+|||++.+....
T Consensus 311 ePP~L~-~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~a~ 359 (391)
T KOG0983|consen 311 EPPLLP-GHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYETAE 359 (391)
T ss_pred CCCCCC-cccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecchhh
Confidence 553222 2234899999999999999999999999999999999886543
No 115
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-45 Score=356.48 Aligned_cols=258 Identities=27% Similarity=0.479 Sum_probs=227.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
+.|+.-++||+|+||.||-++-+.||+-||+|.+.+.............+|-.||.++ +.|.||.+--.|+..+.+|+|
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV-~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKV-SSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHh-ccCcEEEEeeeecCCCceEEE
Confidence 3578888999999999999999999999999999887665556667788999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
+..|.||+|.-+|.+. .+..|+++.++.++.+|+.||++||..+||+|||||+||||+ +.|+
T Consensus 264 LtlMNGGDLkfHiyn~---------------g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLD---d~Gh 325 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNH---------------GNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLD---DHGH 325 (591)
T ss_pred EEeecCCceeEEeecc---------------CCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeec---cCCC
Confidence 9999999997766543 235799999999999999999999999999999999999999 6899
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCCh----hHHHHHHHhC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEVLRN 330 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~----~~~~~~i~~~ 330 (577)
|+|+|+|||..+..+......+||.+|||||++.+ .|+...|+|||||+||||+.|+.||....+ .++-+.++..
T Consensus 326 vRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~ 405 (591)
T KOG0986|consen 326 VRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLED 405 (591)
T ss_pred eEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcc
Confidence 99999999999988888888899999999999864 578999999999999999999999966433 3444555555
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
...++ ..+|+++++|.+.+|++||.+|. ++.++.+||||+..
T Consensus 406 ~~ey~----~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~l 452 (591)
T KOG0986|consen 406 PEEYS----DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDL 452 (591)
T ss_pred hhhcc----cccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccC
Confidence 54444 46899999999999999999998 67899999999974
No 116
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.8e-43 Score=360.97 Aligned_cols=256 Identities=26% Similarity=0.402 Sum_probs=209.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||.|+||.||+|.+..++..+|+|.+.... .......+.+|+++++.+ +||||++++++|..++.+|+|
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 81 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISIC 81 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHC-CCCcccceeEEEEECCEEEEE
Confidence 57999999999999999999999999999999886542 233556789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-CceeccCCCCcEEeecCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~-~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||+++|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++ .++
T Consensus 82 ~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~---~~~ 141 (333)
T cd06650 82 MEHMDGGSLDQVLKK-----------------AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRG 141 (333)
T ss_pred EecCCCCcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEc---CCC
Confidence 999999999887743 25688999999999999999999985 799999999999998 467
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH------
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV------ 327 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i------ 327 (577)
.+||+|||++...... ......||+.|+|||++.+. ++.++|||||||++|+|++|+.||...........+
T Consensus 142 ~~kL~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 220 (333)
T cd06650 142 EIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEG 220 (333)
T ss_pred CEEEeeCCcchhhhhh-ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccC
Confidence 8999999998765322 22445799999999988754 588999999999999999999999755433221111
Q ss_pred --------------------------------------HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 328 --------------------------------------LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 328 --------------------------------------~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
..... +......++.++.+||.+||++||.+|||+.+++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 221 DPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPP--PKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred CccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCC--ccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 00000 00001125678999999999999999999999999
Q ss_pred CccccccC
Q 008127 370 HPWVREGG 377 (577)
Q Consensus 370 hp~f~~~~ 377 (577)
||||+...
T Consensus 299 h~~~~~~~ 306 (333)
T cd06650 299 HAFIKRSE 306 (333)
T ss_pred CHHHhcCc
Confidence 99998653
No 117
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.9e-43 Score=364.26 Aligned_cols=258 Identities=28% Similarity=0.430 Sum_probs=208.9
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 169 (577)
+.++|++.+.||+|+||.||+|.+..+++.||||++..... .......+.+|+.+++.+ +||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~~~~~~ 99 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLE 99 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCcccc-CchhHHHHHHHHHHHHhc-CCCCccccceeeccccccc
Confidence 34689999999999999999999999999999999865432 223456678999999999 599999999987643
Q ss_pred --CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 170 --NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
..+|+||||+++ +|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 100 ~~~~~~lv~e~~~~-~l~~~~~-------------------~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll 159 (364)
T cd07875 100 EFQDVYIVMELMDA-NLCQVIQ-------------------MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159 (364)
T ss_pred ccCeEEEEEeCCCC-CHHHHHH-------------------hcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEE
Confidence 357999999965 6655442 347788899999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
+ .++.+||+|||+++............||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..
T Consensus 160 ~---~~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~ 236 (364)
T cd07875 160 K---SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236 (364)
T ss_pred C---CCCcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 8 478899999999987655444456789999999998865 458899999999999999999999988776665555
Q ss_pred HHhCC----------------------CCCCCC----------------CCCCCCHHHHHHHHHccccCcCCCCCHHHHh
Q 008127 327 VLRNK----------------------PDFRRK----------------PWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368 (577)
Q Consensus 327 i~~~~----------------------~~~~~~----------------~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il 368 (577)
++... +.+... .....+..+.+||.+||..||.+|||+.++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L 316 (364)
T cd07875 237 VIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 316 (364)
T ss_pred HHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHh
Confidence 54311 111000 0011345789999999999999999999999
Q ss_pred cCcccccc
Q 008127 369 SHPWVREG 376 (577)
Q Consensus 369 ~hp~f~~~ 376 (577)
+||||...
T Consensus 317 ~hp~~~~~ 324 (364)
T cd07875 317 QHPYINVW 324 (364)
T ss_pred cCcccccc
Confidence 99999753
No 118
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=3.8e-44 Score=352.74 Aligned_cols=254 Identities=40% Similarity=0.690 Sum_probs=209.7
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
|++++.||+|+||.||+|.+..+++.||+|++...... ........+|+.+++++ .||||+++++++.....+++|||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~v~~ 78 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIE-EEEREENIREIKILRRL-RHPNIVQILDVFQDDNYLYIVME 78 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHH-HHHHHHHHHHHHHHHHH-TBTTBCHEEEEEEESSEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccccc-ccccchhhhhhhccccc-ccccccccccccccccccccccc
Confidence 88999999999999999999999999999999876432 12223345699999999 59999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
|+++++|.+++.. ...+++..+..++.||+.||.+||+.||+||||||+||+++ .++.++
T Consensus 79 ~~~~~~L~~~l~~-----------------~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~---~~~~~~ 138 (260)
T PF00069_consen 79 YCPGGSLQDYLQK-----------------NKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLD---ENGEVK 138 (260)
T ss_dssp EETTEBHHHHHHH-----------------HSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEES---TTSEEE
T ss_pred ccccccccccccc-----------------ccccccccccccccccccccccccccccccccccccccccc---cccccc
Confidence 9999999987752 26789999999999999999999999999999999999998 578899
Q ss_pred EEecCCCccc-CCCCCccccccCCccccchhcc--cCCCCCCchhhHHHHHHHHHhCCCCCCCCC---hhHHHHHHHhCC
Q 008127 258 ATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKT---EDGIFKEVLRNK 331 (577)
Q Consensus 258 l~DFGla~~~-~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwSlG~il~el~tg~~Pf~~~~---~~~~~~~i~~~~ 331 (577)
|+|||.+... ..........+|+.|+|||++. ...+.++||||||+++|+|++|..||.... ............
T Consensus 139 l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~ 218 (260)
T PF00069_consen 139 LIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRP 218 (260)
T ss_dssp ESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccc
Confidence 9999999763 3334455678999999999987 445889999999999999999999998773 233333333221
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
...........++.+.++|.+||+.||++|||+.++++||||
T Consensus 219 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 219 LPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred ccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 111111111234789999999999999999999999999998
No 119
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.1e-43 Score=355.65 Aligned_cols=259 Identities=25% Similarity=0.427 Sum_probs=211.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|.+.+.||.|+||.||+|.+..+++.||+|.+..... ......+.+|+.+++.+ +||||+++++++..++.+|+|
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~lv 82 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTLV 82 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhc-CCCCcceEEEEEecCCeEEEE
Confidence 469999999999999999999999999999999865432 12334577899999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++ ++|.+.+... ...+++..+..++.||+.||.|||+.||+||||||+|||++ .++.
T Consensus 83 ~e~~~-~~l~~~l~~~----------------~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~---~~~~ 142 (301)
T cd07873 83 FEYLD-KDLKQYLDDC----------------GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLIN---ERGE 142 (301)
T ss_pred Eeccc-cCHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEEC---CCCc
Confidence 99996 5887765432 35688999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+||+|||++...... .......+++.|+|||++.+. ++.++|||||||++|+|++|++||.+.+..+....+.....
T Consensus 143 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~ 222 (301)
T cd07873 143 LKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILG 222 (301)
T ss_pred EEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcC
Confidence 999999998764322 223345678999999987653 57889999999999999999999988776655544332111
Q ss_pred C-------------------CCC-------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 333 D-------------------FRR-------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 333 ~-------------------~~~-------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
. ++. ...+.+++.+.+||.+||+.||.+|||+.++|+||||+...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 223 TPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG 293 (301)
T ss_pred CCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 0 000 01235788999999999999999999999999999998765
No 120
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1e-43 Score=368.61 Aligned_cols=257 Identities=30% Similarity=0.459 Sum_probs=209.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC-----e
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-----Y 171 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-----~ 171 (577)
+|++++.||+|+||.||+|.+..+|+.||||.+..... .......+.+|+.+++.+ +||||+++++++...+ .
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 78 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ-NLVSCKRVFRELKMLCFF-KHDNVLSALDILQPPHIDPFEE 78 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEecccccc-chHHHHHHHHHHHHHHhC-CCCCcCCHhheecCCCccccce
Confidence 37889999999999999999999999999998864321 223456788999999999 4999999999998776 7
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+||||+. ++|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 79 ~~lv~e~~~-~~l~~~~~-----------------~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~--- 137 (372)
T cd07853 79 IYVVTELMQ-SDLHKIIV-----------------SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVN--- 137 (372)
T ss_pred EEEEeeccc-cCHHHHHh-----------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEEC---
Confidence 999999996 57766553 236789999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCC--CCccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPG--KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~--~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.++.+||+|||++...... .......+|+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+....+..+
T Consensus 138 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i 217 (372)
T cd07853 138 SNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLI 217 (372)
T ss_pred CCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence 4789999999999765432 223345789999999988753 588999999999999999999999887766555444
Q ss_pred HhC-----------------------CCCCCC-----CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 328 LRN-----------------------KPDFRR-----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 328 ~~~-----------------------~~~~~~-----~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
... ....+. ......++++.+||.+||+.||.+|||+.++|+||||+..
T Consensus 218 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 294 (372)
T cd07853 218 TDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG 294 (372)
T ss_pred HHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence 321 000000 1123467899999999999999999999999999999875
No 121
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2e-43 Score=364.25 Aligned_cols=258 Identities=28% Similarity=0.444 Sum_probs=207.4
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 169 (577)
+.++|++.+.||+|+||.||+|.+..+++.||||.+..... .......+.+|+.+++.+ +||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 92 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKSLE 92 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc-ChHHHHHHHHHHHHHHHh-CCCchhceeeeeecccccc
Confidence 44689999999999999999999999999999999865432 223456778899999999 599999999988643
Q ss_pred --CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 170 --NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
..+|+||||+++ +|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 93 ~~~~~~lv~e~~~~-~l~~~~~-------------------~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill 152 (355)
T cd07874 93 EFQDVYLVMELMDA-NLCQVIQ-------------------MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 152 (355)
T ss_pred ccceeEEEhhhhcc-cHHHHHh-------------------hcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE
Confidence 357999999965 5655431 347888899999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
+ .++.+||+|||+++............||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+....+.+..
T Consensus 153 ~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~ 229 (355)
T cd07874 153 K---SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 229 (355)
T ss_pred C---CCCCEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 8 4788999999999876554445567899999999988654 58899999999999999999999987765444333
Q ss_pred HHhC----------------------CCCCCC----------------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHh
Q 008127 327 VLRN----------------------KPDFRR----------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368 (577)
Q Consensus 327 i~~~----------------------~~~~~~----------------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il 368 (577)
++.. .+.+.. ......+..+.+||.+||..||++|||+.++|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell 309 (355)
T cd07874 230 VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEAL 309 (355)
T ss_pred HHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHh
Confidence 2211 111000 00112356789999999999999999999999
Q ss_pred cCcccccc
Q 008127 369 SHPWVREG 376 (577)
Q Consensus 369 ~hp~f~~~ 376 (577)
+||||...
T Consensus 310 ~hp~~~~~ 317 (355)
T cd07874 310 QHPYINVW 317 (355)
T ss_pred cCcchhcc
Confidence 99999754
No 122
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=8.6e-44 Score=365.30 Aligned_cols=259 Identities=29% Similarity=0.491 Sum_probs=209.2
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 169 (577)
+.++|++++.||.|+||.||+|.+..+++.||||.+..... .......+.+|+.+++.+ +||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ-SLIHARRTYRELRLLKHM-KHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh-hhHHHHHHHHHHHHHHhc-CCCchhhhhhhhccccccc
Confidence 34689999999999999999999999999999999865422 122345677899999999 599999999987543
Q ss_pred --CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 170 --NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
..+|++++++ +++|.+.+ ....+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~------------------~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~ 151 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIV------------------KCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAV 151 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHH------------------hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEE
Confidence 4579999998 77886644 23568999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
+ .++.+||+|||++..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+.+.
T Consensus 152 ~---~~~~~kl~Dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~ 226 (343)
T cd07878 152 N---EDCELRILDFGLARQADD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLK 226 (343)
T ss_pred C---CCCCEEEcCCccceecCC--CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 8 478899999999986543 3345689999999998865 45889999999999999999999998766554444
Q ss_pred HHHhCC-----------------------CCCCC----CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 326 EVLRNK-----------------------PDFRR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 326 ~i~~~~-----------------------~~~~~----~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.+.... +..+. ..+...++.+.+||.+||..||.+|||+.++|+||||.....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~ 306 (343)
T cd07878 227 RIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHD 306 (343)
T ss_pred HHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCC
Confidence 432211 00110 012245677899999999999999999999999999987544
No 123
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=6.3e-43 Score=350.29 Aligned_cols=253 Identities=33% Similarity=0.579 Sum_probs=220.2
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||+|+||.||+|.+..+++.||+|++.............+.+|+++++++. ||||+++++++...+.+|+||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR-HPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCccceeeEEEcCCeEEEEE
Confidence 6999999999999999999999999999999987654433445677899999999995 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+++.. ...+++..+..++.||+.||.|||+.||+||||+|+|||++ .++.+
T Consensus 81 e~~~~~~L~~~~~~-----------------~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~---~~~~~ 140 (290)
T cd05580 81 EYVPGGELFSHLRK-----------------SGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLD---SDGYI 140 (290)
T ss_pred ecCCCCCHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC---CCCCE
Confidence 99999999887643 26789999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~ 335 (577)
||+|||++...... .....|++.|+|||.+.+. .+.++||||||+++|+|++|..||...........+..+...++
T Consensus 141 kl~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 218 (290)
T cd05580 141 KITDFGFAKRVKGR--TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFP 218 (290)
T ss_pred EEeeCCCccccCCC--CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCC
Confidence 99999999876543 3445789999999987654 57889999999999999999999988777667777765544433
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 336 RKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 336 ~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
..++..+.++|.+||..||.+|+ ++.++++||||+..
T Consensus 219 ----~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 260 (290)
T cd05580 219 ----SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGI 260 (290)
T ss_pred ----ccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccC
Confidence 34688999999999999999999 99999999999764
No 124
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.6e-44 Score=356.26 Aligned_cols=258 Identities=28% Similarity=0.480 Sum_probs=204.9
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
+..|++++.||+||.++||++.. .+.+.||+|.+..... .......+.+|+.+|.+|++|.+||++|+|-..++++||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~-s~~~iyalkkv~~~~~-D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm 437 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLN-SDKQIYALKKVVLLEA-DNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM 437 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeec-CCCcchhhhHHHHhhc-CHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence 45799999999999999999984 3456777776644332 356788899999999999999999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||- ..+|...|.+. ....+...++.|..|+|.|+.++|.+||||.||||.|+|+- .|
T Consensus 438 vmE~G-d~DL~kiL~k~----------------~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV----kG 496 (677)
T KOG0596|consen 438 VMECG-DIDLNKILKKK----------------KSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV----KG 496 (677)
T ss_pred Eeecc-cccHHHHHHhc----------------cCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE----ee
Confidence 99985 45777666433 23344457889999999999999999999999999999997 68
Q ss_pred CeeEEecCCCcccCCCCC---ccccccCCccccchhccc------------CCCCCCchhhHHHHHHHHHhCCCCCCCCC
Q 008127 255 SLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR------------KSGPESDVWSIGVITYILLCGRRPFWDKT 319 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~------------~~~~~~DiwSlG~il~el~tg~~Pf~~~~ 319 (577)
.+||+|||+|..+.+... ....+||+.|||||.+.. +.++++||||||||||+|+.|++||..-.
T Consensus 497 ~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~ 576 (677)
T KOG0596|consen 497 RLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII 576 (677)
T ss_pred eEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH
Confidence 999999999998865433 235799999999998742 13678999999999999999999995543
Q ss_pred -hhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 320 -EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 320 -~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.-..+..|.....+...+..+. ..++.++++.||.+||++|||+.++|+|||++..
T Consensus 577 n~~aKl~aI~~P~~~Iefp~~~~-~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~ 633 (677)
T KOG0596|consen 577 NQIAKLHAITDPNHEIEFPDIPE-NDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQ 633 (677)
T ss_pred HHHHHHHhhcCCCccccccCCCC-chHHHHHHHHHHhcCcccCCCcHHHhcCcccccc
Confidence 2233334444333222222221 1349999999999999999999999999999753
No 125
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.3e-43 Score=358.06 Aligned_cols=258 Identities=28% Similarity=0.434 Sum_probs=194.7
Q ss_pred eeeecccCCeEEEEEEEc--CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--CCeEEEEE
Q 008127 101 GKLLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYVYIAM 176 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~--~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~~lv~ 176 (577)
+++||+|+||.||+|+++ .+++.||+|.+..... ...+.+|+.+++++ +||||+++++++.. +..+|+||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-----SMSACREIALLREL-KHPNVISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-----cHHHHHHHHHHHhc-CCCCCcceeeeEecCCCcEEEEEE
Confidence 467999999999999865 4678999999865432 24467899999999 59999999998854 56789999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC-CCCCC
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA-KEDSS 255 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~-~~~~~ 255 (577)
||+. ++|.+.+....... .......+++..++.++.||+.||.|||++||+||||||+|||+... ..++.
T Consensus 80 e~~~-~~l~~~~~~~~~~~--------~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~ 150 (317)
T cd07868 80 DYAE-HDLWHIIKFHRASK--------ANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGR 150 (317)
T ss_pred eccC-CCHHHHHHhccccc--------ccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCc
Confidence 9995 57877664321100 01122468999999999999999999999999999999999999532 24578
Q ss_pred eeEEecCCCcccCCC----CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChh--------
Q 008127 256 LKATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED-------- 321 (577)
Q Consensus 256 vkl~DFGla~~~~~~----~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~-------- 321 (577)
+||+|||+|...... ......+||+.|+|||++.+ .++.++||||+||++|+|++|++||......
T Consensus 151 ~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~ 230 (317)
T cd07868 151 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYH 230 (317)
T ss_pred EEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCccccccccccc
Confidence 999999999865432 12345689999999998865 3588999999999999999999999653321
Q ss_pred -HHHHHHHhCCC--------------C-------CCC-------------CCCCCCCHHHHHHHHHccccCcCCCCCHHH
Q 008127 322 -GIFKEVLRNKP--------------D-------FRR-------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQ 366 (577)
Q Consensus 322 -~~~~~i~~~~~--------------~-------~~~-------------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~ 366 (577)
..+..+..... . +.. ......+.++.+||.+||+.||.+|||+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e 310 (317)
T cd07868 231 HDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQ 310 (317)
T ss_pred HHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHH
Confidence 11222211000 0 000 000123457889999999999999999999
Q ss_pred HhcCccc
Q 008127 367 ALSHPWV 373 (577)
Q Consensus 367 il~hp~f 373 (577)
+|+||||
T Consensus 311 ~l~hp~f 317 (317)
T cd07868 311 AMQDPYF 317 (317)
T ss_pred HhcCCCC
Confidence 9999998
No 126
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=5.7e-43 Score=347.08 Aligned_cols=256 Identities=28% Similarity=0.501 Sum_probs=211.4
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----- 168 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----- 168 (577)
....|++.+.||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.++.++.+||||+++++++..
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 79 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCC
Confidence 4567999999999999999999999999999999986543 2345688999999998679999999999875
Q ss_pred -CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 169 -DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 169 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
...+|+||||+++|+|.+.+... ....+++..+..++.|++.||.|||+++|+||||||+||++
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~---------------~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili 144 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLIKNT---------------KGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL 144 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHHHhc---------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEE
Confidence 24689999999999999877432 23568999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCC-CCccccccCCccccchhccc------CCCCCCchhhHHHHHHHHHhCCCCCCCCCh
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTE 320 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~------~~~~~~DiwSlG~il~el~tg~~Pf~~~~~ 320 (577)
+ .++.+||+|||++...... .......|++.|+|||++.+ .++.++|||||||++|+|++|..||.....
T Consensus 145 ~---~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~ 221 (272)
T cd06637 145 T---ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP 221 (272)
T ss_pred C---CCCCEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCH
Confidence 8 4778999999999765432 22345679999999998752 357789999999999999999999977655
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
......+.... ........++..+.+||.+||..+|.+|||+.+++.||||
T Consensus 222 ~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 222 MRALFLIPRNP--APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred HHHHHHHhcCC--CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 44444333321 1222234578899999999999999999999999999998
No 127
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.2e-42 Score=342.91 Aligned_cols=255 Identities=28% Similarity=0.481 Sum_probs=212.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCc--hhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL--PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~--~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
+.|.+.+.||.|+||.||+|.+..+++.||+|.+....... ......+.+|+.+++++ +||||+++++++..++.++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~ 80 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-QHERIVQYYGCLRDDETLS 80 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEccCCeEE
Confidence 35899999999999999999999999999999986543211 12346788999999999 5999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+|+||+++++|.+.+... ..+++..+..++.|++.||.|||+.||+||||+|+||+++ .+
T Consensus 81 ~v~e~~~~~~l~~~~~~~-----------------~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~---~~ 140 (263)
T cd06625 81 IFMEYMPGGSVKDQLKAY-----------------GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRD---SA 140 (263)
T ss_pred EEEEECCCCcHHHHHHHh-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CC
Confidence 999999999998876432 5688999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCCCC----ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 254 SSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
+.++|+|||++........ .....|+..|+|||++.+. ++.++|||||||++|+|++|+.||...........+.
T Consensus 141 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~ 220 (263)
T cd06625 141 GNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIA 220 (263)
T ss_pred CCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHh
Confidence 8899999999876543211 1345688999999988754 5889999999999999999999998766655555544
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
..... ......++..+.++|.+||..+|.+|||+.++++||||
T Consensus 221 ~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 221 TQPTN--PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred ccCCC--CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 33222 12224578899999999999999999999999999998
No 128
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=5.1e-43 Score=358.83 Aligned_cols=267 Identities=24% Similarity=0.299 Sum_probs=204.7
Q ss_pred cceeeeeeecccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC-
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD- 169 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~- 169 (577)
++|++.+.||.|+||.||+|.+. .++..||||++.... .......+.+|+.++..+.+||||+++++++...
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 57999999999999999999752 445789999986432 1234567899999999996799999999988754
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhh---h------------------------------------------HHHh
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTS---A------------------------------------------WFLA 204 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~---~------------------------------------------~~~~ 204 (577)
+.+++|||||++|+|.+++........... . ....
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 468999999999999998865311000000 0 0000
Q ss_pred hhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCC---ccccccCCc
Q 008127 205 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAY 281 (577)
Q Consensus 205 ~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~ 281 (577)
......+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++....... .....+++.
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~---~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~ 241 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGSARLPLK 241 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEc---CCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence 00124588999999999999999999999999999999999998 478899999999986533221 123356788
Q ss_pred cccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcC
Q 008127 282 YVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR 359 (577)
Q Consensus 282 y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~ 359 (577)
|+|||++.+ .++.++|||||||++|||++ |..||.+....+.+...+....... ....+++.+.+|+.+||..||.
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~ 319 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMR--APENATPEIYRIMLACWQGDPK 319 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCC--CCCCCCHHHHHHHHHHccCChh
Confidence 999998764 46899999999999999997 9999987655444444443322221 2246788999999999999999
Q ss_pred CCCCHHHHhc
Q 008127 360 ARLTAAQALS 369 (577)
Q Consensus 360 ~Rpt~~~il~ 369 (577)
+|||+.++++
T Consensus 320 ~RPs~~el~~ 329 (338)
T cd05102 320 ERPTFSALVE 329 (338)
T ss_pred hCcCHHHHHH
Confidence 9999999875
No 129
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-43 Score=374.05 Aligned_cols=248 Identities=29% Similarity=0.508 Sum_probs=207.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEE-EEc---C---
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNA-FED---D--- 169 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~-~~~---~--- 169 (577)
+++|.+.|.+|||+.||+|++...|..||+|++.... +...+.+.+||++|+.|++|||||.+++. ... .
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~d---e~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVND---EEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCC---HHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 6889999999999999999998888999999886653 56889999999999999999999999993 321 1
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC--ceeccCCCCcEEe
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLF 247 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~--iiHrDlKp~NILl 247 (577)
-.++|+||||.||.|.|++... ....|++.+++.|+.|+++|+.+||... |||||||-|||||
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~R---------------lq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLl 179 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTR---------------LQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLL 179 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHH---------------HhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEE
Confidence 2588999999999999988654 2355999999999999999999999987 9999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCC-Ccc---------ccccCCccccchhcc---cC-CCCCCchhhHHHHHHHHHhCCC
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGK-KFQ---------DIVGSAYYVAPEVLK---RK-SGPESDVWSIGVITYILLCGRR 313 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~-~~~---------~~~gt~~y~aPE~~~---~~-~~~~~DiwSlG~il~el~tg~~ 313 (577)
. .+++.||||||.|.-.-... ... ..-.|+.|+|||++. +. .++|+|||||||+||-|++..+
T Consensus 180 s---~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~ 256 (738)
T KOG1989|consen 180 S---ADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTT 256 (738)
T ss_pred c---CCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCC
Confidence 8 47899999999987432221 111 124799999999874 33 4899999999999999999999
Q ss_pred CCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCc
Q 008127 314 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 371 (577)
Q Consensus 314 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp 371 (577)
||.+.... .|+.+...++. .+.++..+.+||..||+.||.+||++-+++.+-
T Consensus 257 PFe~sg~l----aIlng~Y~~P~--~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~ 308 (738)
T KOG1989|consen 257 PFEESGKL----AILNGNYSFPP--FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEI 308 (738)
T ss_pred CcCcCcce----eEEeccccCCC--CccHHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence 99766443 45566555543 467899999999999999999999999988753
No 130
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.5e-42 Score=352.03 Aligned_cols=259 Identities=34% Similarity=0.590 Sum_probs=220.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||+|.+..+++.||+|.+.............+..|+++++.+. ||||+++++.+......|+||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLD-HPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCC-CCCchhheeeeecCCEEEEEE
Confidence 6999999999999999999999999999999997765433345667899999999995 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+.+++|.+.+... ....+++..++.++.||+.||.|||+.|++||||||+||+++ .++.+
T Consensus 81 e~~~~~~L~~~~~~~---------------~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~ 142 (316)
T cd05574 81 DYCPGGELFRLLQRQ---------------PGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLH---ESGHI 142 (316)
T ss_pred EecCCCCHHHHHHhC---------------CCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEc---CCCCE
Confidence 999999998876432 235689999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCC------------------------------CccccccCCccccchhcccC-CCCCCchhhHHHHH
Q 008127 257 KATDFGLSDFIKPGK------------------------------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVIT 305 (577)
Q Consensus 257 kl~DFGla~~~~~~~------------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il 305 (577)
+|+|||++....... ......||..|+|||++.+. ++.++|||||||++
T Consensus 143 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll 222 (316)
T cd05574 143 MLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILL 222 (316)
T ss_pred EEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHH
Confidence 999999986543211 11234789999999988654 58899999999999
Q ss_pred HHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCC----HHHHhcCcccccc
Q 008127 306 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT----AAQALSHPWVREG 376 (577)
Q Consensus 306 ~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt----~~~il~hp~f~~~ 376 (577)
|+|++|..||.+.+....+..+......++. ...++..+.++|.+||..||++||| +.++|.||||+..
T Consensus 223 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~ 295 (316)
T cd05574 223 YEMLYGTTPFKGSNRDETFSNILKKEVTFPG--SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGV 295 (316)
T ss_pred HHHhhCCCCCCCCchHHHHHHHhcCCccCCC--ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcC
Confidence 9999999999888887777777655444332 2237899999999999999999999 9999999999874
No 131
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-44 Score=344.61 Aligned_cols=266 Identities=29% Similarity=0.420 Sum_probs=216.6
Q ss_pred ccccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCC-----CeeEEE
Q 008127 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE-----NVVKFY 163 (577)
Q Consensus 89 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hp-----niv~~~ 163 (577)
...+.+..+|.+..++|+|.||+|-.+.+..++..||||+++.- ....+..+-|+++|.++..+. .+|++.
T Consensus 82 ~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V----~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~ 157 (415)
T KOG0671|consen 82 QVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV----DKYREAALIEIEVLQKINESDPNGKFRCVQMR 157 (415)
T ss_pred EeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH----HHHhhHHHHHHHHHHHHHhcCCCCceEEEeee
Confidence 34566788999999999999999999999999999999988643 245677788999999995332 488899
Q ss_pred EEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCC
Q 008127 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 243 (577)
Q Consensus 164 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~ 243 (577)
++|...++.|||+|.+ |-++++++..+ ...+++..+++.+++|++.++++||+.+++|.||||+
T Consensus 158 ~wFdyrghiCivfell-G~S~~dFlk~N---------------~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPE 221 (415)
T KOG0671|consen 158 DWFDYRGHICIVFELL-GLSTFDFLKEN---------------NYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPE 221 (415)
T ss_pred hhhhccCceEEEEecc-ChhHHHHhccC---------------CccccchHHHHHHHHHHHHHHHHHHhcceeecCCChh
Confidence 9999999999999998 77999987654 4577999999999999999999999999999999999
Q ss_pred cEEeecCC-----------------CCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHH
Q 008127 244 NFLFKSAK-----------------EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVIT 305 (577)
Q Consensus 244 NILl~~~~-----------------~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il 305 (577)
|||+.+.. ++..|+|+|||.|++.. ......+.|..|+|||++.+ +++.++||||+||||
T Consensus 222 NILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~--e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL 299 (415)
T KOG0671|consen 222 NILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDH--EHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCIL 299 (415)
T ss_pred eEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceec--cCcceeeeccccCCchheeccCcCCccCceeeeeEE
Confidence 99996421 24679999999998754 34467899999999998766 679999999999999
Q ss_pred HHHHhCCCCCCCCChhH---HHHHHHhCCCCC-------------CCCCCCC-----------------------CC---
Q 008127 306 YILLCGRRPFWDKTEDG---IFKEVLRNKPDF-------------RRKPWPS-----------------------IS--- 343 (577)
Q Consensus 306 ~el~tg~~Pf~~~~~~~---~~~~i~~~~~~~-------------~~~~~~~-----------------------~s--- 343 (577)
+||+||...|+.....+ +++.|+...|.. ....|+. .+
T Consensus 300 ~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~ 379 (415)
T KOG0671|consen 300 VELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEH 379 (415)
T ss_pred EEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHH
Confidence 99999999998776544 334443211100 0011211 01
Q ss_pred HHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 344 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 344 ~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
..+.|||++||.+||.+|+|+.|+|.||||+..
T Consensus 380 ~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 380 VQLFDLLRRMLEFDPARRITLREALSHPFFARL 412 (415)
T ss_pred hHHHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence 157899999999999999999999999999864
No 132
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5e-43 Score=361.11 Aligned_cols=250 Identities=22% Similarity=0.363 Sum_probs=199.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
..|++++.||+|+||.||+|.+..++..||+|+..... ...|+.+++++ +||||+++++++...+..++|
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~---------~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT---------TLIEAMLLQNV-NHPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc---------cHHHHHHHHhC-CCCCCcChhheEEeCCeeEEE
Confidence 36999999999999999999999999999999754332 24689999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+. ++|.+++... ...+++..+..++.||+.||.|||++|||||||||+|||++ .++.
T Consensus 136 ~e~~~-~~l~~~l~~~----------------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~---~~~~ 195 (357)
T PHA03209 136 LPHYS-SDLYTYLTKR----------------SRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFIN---DVDQ 195 (357)
T ss_pred EEccC-CcHHHHHHhc----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCC
Confidence 99994 6887766432 36789999999999999999999999999999999999998 4778
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChh----------HHH
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED----------GIF 324 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~----------~~~ 324 (577)
+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|+++..|+...... ..+
T Consensus 196 ~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l 275 (357)
T PHA03209 196 VCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHL 275 (357)
T ss_pred EEEecCccccccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHH
Confidence 99999999986544444456689999999998765 5689999999999999999865554332111 111
Q ss_pred HHHHhCC----CCCC------------------C--------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q 008127 325 KEVLRNK----PDFR------------------R--------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374 (577)
Q Consensus 325 ~~i~~~~----~~~~------------------~--------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~ 374 (577)
..++... ..++ . .....++..+.+||.+||+.||.+|||+.++|+||||+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~ 355 (357)
T PHA03209 276 LKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFA 355 (357)
T ss_pred HHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhc
Confidence 1111110 0011 0 00123566788899999999999999999999999998
Q ss_pred c
Q 008127 375 E 375 (577)
Q Consensus 375 ~ 375 (577)
.
T Consensus 356 ~ 356 (357)
T PHA03209 356 Q 356 (357)
T ss_pred c
Confidence 5
No 133
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.7e-42 Score=346.15 Aligned_cols=257 Identities=26% Similarity=0.419 Sum_probs=207.5
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||+|++..++..||||.+...... ......+.+|+.+++.+ +||||+++++++..++.+|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~ 78 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEE-EGVPSTAIREISLLKEL-QHPNIVCLQDVLMQESRLYLIF 78 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEecccccc-CCchHHHHHHHHHHHhc-CCCCEeeeEEEEeeCCeEEEEE
Confidence 488999999999999999999999999999998654321 22346678999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++ ++|.+++... .....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 79 e~~~-~~l~~~~~~~--------------~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~---~~~~~ 140 (285)
T cd07861 79 EFLS-MDLKKYLDSL--------------PKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLID---NKGVI 140 (285)
T ss_pred ecCC-CCHHHHHhcC--------------CCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEc---CCCcE
Confidence 9997 5787765322 1235689999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCC-CccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 257 KATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 257 kl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
||+|||++....... ......+++.|+|||++.+. ++.++|||||||++|+|++|++||.+.........+......
T Consensus 141 ~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~ 220 (285)
T cd07861 141 KLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGT 220 (285)
T ss_pred EECcccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCC
Confidence 999999987553222 22344678999999987643 478899999999999999999999876654433332221100
Q ss_pred -------------------------CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 334 -------------------------FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 334 -------------------------~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.....+..+++++.++|.+||+.||.+|||+.+++.||||
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 221 PTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred CChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 0011124578899999999999999999999999999998
No 134
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-42 Score=362.91 Aligned_cols=253 Identities=23% Similarity=0.367 Sum_probs=203.3
Q ss_pred cccceeeeeeecccCCeEEEEEEEc--CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~--~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
+..+|.+++.||.|+||.||+|... .++..||+|.+.... ...+|+.+++.+ +||||+++++++.....
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~--------~~~~E~~il~~l-~h~~iv~~~~~~~~~~~ 160 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK--------TPGREIDILKTI-SHRAIINLIHAYRWKST 160 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc--------cHHHHHHHHHhc-CCCCccceeeeEeeCCE
Confidence 4567999999999999999999754 356789999875432 246899999999 59999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+|||++. ++|.+++. ....+++..++.++.||+.||.|||++|||||||||+|||++
T Consensus 161 ~~lv~e~~~-~~l~~~l~-----------------~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~--- 219 (392)
T PHA03207 161 VCMVMPKYK-CDLFTYVD-----------------RSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLD--- 219 (392)
T ss_pred EEEEehhcC-CCHHHHHH-----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc---
Confidence 999999995 67877662 236789999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCCh---hHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE---DGIF 324 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~---~~~~ 324 (577)
.++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+... ...+
T Consensus 220 ~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l 299 (392)
T PHA03207 220 EPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQL 299 (392)
T ss_pred CCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHH
Confidence 478899999999976543322 235679999999998875 468899999999999999999999977542 2222
Q ss_pred HHHHhCC----CCCC------------------CCC--C------CCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q 008127 325 KEVLRNK----PDFR------------------RKP--W------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374 (577)
Q Consensus 325 ~~i~~~~----~~~~------------------~~~--~------~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~ 374 (577)
..++... ..++ ... + ..++.++.+||.+||..||++|||+.++|.||||+
T Consensus 300 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~ 379 (392)
T PHA03207 300 RSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFT 379 (392)
T ss_pred HHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhh
Confidence 2222210 0000 000 0 12466789999999999999999999999999998
Q ss_pred cc
Q 008127 375 EG 376 (577)
Q Consensus 375 ~~ 376 (577)
..
T Consensus 380 ~~ 381 (392)
T PHA03207 380 KE 381 (392)
T ss_pred cc
Confidence 64
No 135
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-44 Score=361.56 Aligned_cols=253 Identities=26% Similarity=0.451 Sum_probs=213.3
Q ss_pred eecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCCC
Q 008127 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGG 182 (577)
Q Consensus 103 ~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g 182 (577)
+||+|.||+||.|+|+.|....|||.|.... ....+-+..||.+.++|+ |.|||+++|.+..++++-|.||-+|||
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekd---sr~~QPLhEEIaLH~~Lr-HkNIVrYLGs~senGf~kIFMEqVPGG 657 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKD---SREVQPLHEEIALHSTLR-HKNIVRYLGSVSENGFFKIFMEQVPGG 657 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeeccccc---chhhccHHHHHHHHHHHh-hHhHHHHhhccCCCCeEEEEeecCCCC
Confidence 6999999999999999999999999997543 345677889999999996 999999999999999999999999999
Q ss_pred chhHHHHHHhhhhhhhhhHHHhhhcCCCC--CHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 183 ELLDRILAKMISTTLTSAWFLAIRKDSRY--TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 183 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
+|.+.|..+ =+++ .+..+..+.+||++||.|||.+.|||||||-+|+|++. -.|.+||+|
T Consensus 658 SLSsLLrsk----------------WGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNT--ySGvlKISD 719 (1226)
T KOG4279|consen 658 SLSSLLRSK----------------WGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNT--YSGVLKISD 719 (1226)
T ss_pred cHHHHHHhc----------------cCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEee--ccceEEecc
Confidence 999877543 2556 78889999999999999999999999999999999986 578999999
Q ss_pred cCCCcccCC-CCCccccccCCccccchhccc---CCCCCCchhhHHHHHHHHHhCCCCCCCCCh-hHHHHHHHhCCCCCC
Q 008127 261 FGLSDFIKP-GKKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRNKPDFR 335 (577)
Q Consensus 261 FGla~~~~~-~~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwSlG~il~el~tg~~Pf~~~~~-~~~~~~i~~~~~~~~ 335 (577)
||-++.+.. +....++.||..|||||++.. +|+.++|||||||++.||.||++||..... +..+-++ +.....
T Consensus 720 FGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkV--GmyKvH 797 (1226)
T KOG4279|consen 720 FGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKV--GMYKVH 797 (1226)
T ss_pred cccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhh--cceecC
Confidence 999876643 334567899999999999974 569999999999999999999999976433 2222221 222222
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCC
Q 008127 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379 (577)
Q Consensus 336 ~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~ 379 (577)
.+.+..+|.+++.||.+|+.+||.+||+|.++|..||++....+
T Consensus 798 P~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~~kk 841 (1226)
T KOG4279|consen 798 PPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHNNKK 841 (1226)
T ss_pred CCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccCCCC
Confidence 23335678899999999999999999999999999999976433
No 136
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=6.5e-42 Score=336.45 Aligned_cols=254 Identities=22% Similarity=0.466 Sum_probs=213.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-CCeEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-DNYVYIA 175 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~~~~~lv 175 (577)
.|++.+.||.|+||.||++.+..+++.||+|.+..... .....+.+.+|+.+++++ +|||++++++.+.. +..+|+|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~lv 78 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQL-KHPNIVAYRESWEGEDGLLYIV 78 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhC-CCCCeeeeeeeecCCCCEEEEE
Confidence 48999999999999999999999999999999865432 223456788999999999 59999999998864 5578999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++++|.+.+... ....+++.+++.++.|++.||.|||+.||+||||||+||+++ .++.
T Consensus 79 ~e~~~~~~l~~~l~~~---------------~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~---~~~~ 140 (257)
T cd08223 79 MGFCEGGDLYHKLKEQ---------------KGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLT---RTNI 140 (257)
T ss_pred ecccCCCcHHHHHHHh---------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEe---cCCc
Confidence 9999999998877532 235689999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCC-CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
++|+|||++....... ......|++.|+|||++.+. ++.++|||||||++|+|++|+.||...+.......+..+...
T Consensus 141 ~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~ 220 (257)
T cd08223 141 IKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLP 220 (257)
T ss_pred EEEecccceEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC
Confidence 9999999997664322 22345789999999987654 578999999999999999999999877766666666554332
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.....+++.+.+|+.+||..+|.+|||+.++++||||
T Consensus 221 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 221 ---PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred ---CCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 1224578999999999999999999999999999997
No 137
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=6.2e-42 Score=345.66 Aligned_cols=258 Identities=29% Similarity=0.474 Sum_probs=218.0
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||++.+..+++.||+|.+.............+.+|+.+++.+ +||||+++++.+..++.+|+||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFA-ENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEecCCEEEEEE
Confidence 589999999999999999999999999999998765433334456788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++|++|.+.+.. ...+++..+..++.|++.||.|||+.|++||||||+||+++ .++.+
T Consensus 81 e~~~g~~L~~~l~~-----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~---~~~~~ 140 (305)
T cd05609 81 EYVEGGDCATLLKN-----------------IGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLIT---SMGHI 140 (305)
T ss_pred ecCCCCcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEEC---CCCCE
Confidence 99999999887643 25689999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCC----------------CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCC
Q 008127 257 KATDFGLSDFIKPGK----------------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT 319 (577)
Q Consensus 257 kl~DFGla~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~ 319 (577)
||+|||+++...... ......|+..|+|||.+.+ .++.++|||||||++|+|++|..||.+..
T Consensus 141 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~ 220 (305)
T cd05609 141 KLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT 220 (305)
T ss_pred EEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999986421100 0112467889999998754 45889999999999999999999999888
Q ss_pred hhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCC---HHHHhcCcccccc
Q 008127 320 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT---AAQALSHPWVREG 376 (577)
Q Consensus 320 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt---~~~il~hp~f~~~ 376 (577)
..+.+..+.......+... ..++.++.++|.+||..+|++||+ +.++|+||||...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~ 279 (305)
T cd05609 221 PEELFGQVISDDIEWPEGD-EALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL 279 (305)
T ss_pred HHHHHHHHHhcccCCCCcc-ccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence 8887877776654444332 257899999999999999999998 7999999999763
No 138
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.6e-42 Score=343.85 Aligned_cols=258 Identities=27% Similarity=0.484 Sum_probs=215.2
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
..+|++.+.||.|+||.||+|.+..+++.||+|.+..... .....+.+|+.+++.+ +||||+++++.+......|+
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~e~~~l~~~-~h~~v~~~~~~~~~~~~~~l 94 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWV 94 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhC-CCCCEeeEEEEEEeCCEEEE
Confidence 3589999999999999999999999999999999876542 2346688999999998 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+++. ...+++.++..++.|++.||.|||+.||+||||||+||+++ .++
T Consensus 95 v~e~~~~~~L~~~~~------------------~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~---~~~ 153 (296)
T cd06654 95 VMEYLAGGSLTDVVT------------------ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDG 153 (296)
T ss_pred eecccCCCCHHHHHH------------------hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc---CCC
Confidence 999999999988663 23578889999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCC-ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 255 SLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
.+||+|||++........ .....|++.|+|||.+.+. ++.++|||||||++|+|++|+.||...........+.....
T Consensus 154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~ 233 (296)
T cd06654 154 SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT 233 (296)
T ss_pred CEEECccccchhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCC
Confidence 899999999876543322 2345789999999988654 58899999999999999999999987766544433333221
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
......+.++..+.++|.+||..+|++|||+.++++||||.....
T Consensus 234 -~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 278 (296)
T cd06654 234 -PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278 (296)
T ss_pred -CCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence 111122457889999999999999999999999999999987544
No 139
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=5.1e-42 Score=346.70 Aligned_cols=256 Identities=27% Similarity=0.395 Sum_probs=209.9
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||+|+||.||++.+..+|..+|+|.+.... .......+.+|+++++++ +||||+++++++..++.+|+||
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHEC-NSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCEEEEEe
Confidence 5899999999999999999999999999999886432 233456788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCCC
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||+++++|.+++.. ...+++..+..++.||+.||.|||+ .+++||||||+|||++ .++.
T Consensus 79 ey~~~~~L~~~l~~-----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~---~~~~ 138 (308)
T cd06615 79 EHMDGGSLDQVLKK-----------------AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVN---SRGE 138 (308)
T ss_pred eccCCCcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEe---cCCc
Confidence 99999999887643 2668999999999999999999997 6999999999999998 4778
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC-
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD- 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~- 333 (577)
+||+|||++...... .....+|++.|+|||++.+. ++.++|||||||++|+|++|+.||...+.......+......
T Consensus 139 ~~l~dfg~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 217 (308)
T cd06615 139 IKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEG 217 (308)
T ss_pred EEEccCCCccccccc-ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccc
Confidence 999999998765432 23456889999999988654 578899999999999999999999765533322211110000
Q ss_pred ---------------------------------CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 334 ---------------------------------FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 334 ---------------------------------~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.+..+...++.++.+|+.+||..+|++|||+.++++||||...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 218 EAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred cccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 0011112367889999999999999999999999999999864
No 140
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-43 Score=359.85 Aligned_cols=259 Identities=24% Similarity=0.445 Sum_probs=221.8
Q ss_pred cce-eeeeeecccCCeEEEEEEEcCCCCEEEEEEeccccc-CchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC--e
Q 008127 96 RRY-TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM-ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN--Y 171 (577)
Q Consensus 96 ~~y-~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--~ 171 (577)
.+| +...+||+|+|-+||+|.|..+|..||.-.+...+. ..+...+.|..|+.+|+.|+ |||||++|.+|.+.. .
T Consensus 39 gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~-H~NIirfy~SW~d~~n~~ 117 (632)
T KOG0584|consen 39 GRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLK-HPNIIRFYDSWVDTDNKT 117 (632)
T ss_pred CceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCC-CCceeeeeeheecCCCce
Confidence 445 456789999999999999999999998755543322 23556789999999999995 999999999998754 4
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc--CceeccCCCCcEEeec
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKS 249 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~--~iiHrDlKp~NILl~~ 249 (577)
+.+|+|++..|+|..|+.+. +......+..|++||+.||.|||++ .|||||||.+||+|+.
T Consensus 118 in~iTEL~TSGtLr~Y~kk~-----------------~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG 180 (632)
T KOG0584|consen 118 INFITELFTSGTLREYRKKH-----------------RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNG 180 (632)
T ss_pred eeeeeecccCCcHHHHHHHh-----------------ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcC
Confidence 88999999999998877544 7888999999999999999999998 5999999999999984
Q ss_pred CCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccCCCCCCchhhHHHHHHHHHhCCCCCCC-CChhHHHHHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVL 328 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~-~~~~~~~~~i~ 328 (577)
..|.|||+|+|||+...... ....+|||.|||||++...|+..+||||||+.++||+|+..||.. .+..++|+++.
T Consensus 181 --~~G~VKIGDLGLAtl~r~s~-aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~ 257 (632)
T KOG0584|consen 181 --NLGEVKIGDLGLATLLRKSH-AKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVT 257 (632)
T ss_pred --CcCceeecchhHHHHhhccc-cceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHH
Confidence 68999999999999876433 344799999999999999999999999999999999999999965 57788999999
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.+..+-...... .+++++||.+||.. ...|||+.++|.||||.....
T Consensus 258 SGiKP~sl~kV~--dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d~g 304 (632)
T KOG0584|consen 258 SGIKPAALSKVK--DPEVREFIEKCLAT-KSERLSAKELLKDPFFDEDGG 304 (632)
T ss_pred cCCCHHHhhccC--CHHHHHHHHHHhcC-chhccCHHHHhhChhhccccc
Confidence 887543333222 58999999999999 999999999999999998643
No 141
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.1e-42 Score=342.14 Aligned_cols=253 Identities=28% Similarity=0.464 Sum_probs=208.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|.+.+.||+|+||.||+|++..+++.||+|.+.... ......+.+|+.+++.+ +||||+++++++...+.+|+|
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l-~h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDC-KHSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEEEEE
Confidence 47999999999999999999999999999999986543 22345678899999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++++|.+.+.. ...+++..++.++.|++.||.|||+.||+|+||||+||+++ .++.
T Consensus 85 ~e~~~~~~L~~~~~~-----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~---~~~~ 144 (267)
T cd06645 85 MEFCGGGSLQDIYHV-----------------TGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLT---DNGH 144 (267)
T ss_pred EeccCCCcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCC
Confidence 999999999887643 36789999999999999999999999999999999999998 4778
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhcc----cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
+||+|||++...... .......||+.|+|||++. +.++.++|||||||++|+|++|..||...............
T Consensus 145 ~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~ 224 (267)
T cd06645 145 VKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKS 224 (267)
T ss_pred EEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhcc
Confidence 999999998755322 1223457999999999873 34678999999999999999999999766554433333222
Q ss_pred CCCCCC-CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcc
Q 008127 331 KPDFRR-KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372 (577)
Q Consensus 331 ~~~~~~-~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~ 372 (577)
....+. .....++..+.++|.+||..+|++|||+.++++|||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 225 NFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred CCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 211111 111246788999999999999999999999999998
No 142
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=5.6e-42 Score=343.76 Aligned_cols=259 Identities=31% Similarity=0.466 Sum_probs=216.1
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.+.|++++.||.|+||.||+|.+..+++.||+|.+.... ......+.+|+.+++.+ +||||+++++.+..++.+|+
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 86 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYMVEIEILATC-NHPYIVKLLGAFYWDGKLWI 86 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC---HHHHHHHHHHHHHHHhC-CCCcEeeeEEEEEeCCeEEE
Confidence 357999999999999999999999999999999986542 34567788999999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|...+.+. ...+++..+..++.||+.||.|||+.||+||||||+||+++ .++
T Consensus 87 v~e~~~~~~l~~~~~~~----------------~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~---~~~ 147 (292)
T cd06644 87 MIEFCPGGAVDAIMLEL----------------DRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLT---LDG 147 (292)
T ss_pred EEecCCCCcHHHHHHhh----------------cCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEc---CCC
Confidence 99999999987765332 35689999999999999999999999999999999999997 478
Q ss_pred CeeEEecCCCcccCCC-CCccccccCCccccchhccc------CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 255 SLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~------~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.+||+|||++...... .......+++.|+|||++.+ .++.++|||||||++|+|++|..||...+....+..+
T Consensus 148 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~ 227 (292)
T cd06644 148 DIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI 227 (292)
T ss_pred CEEEccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHH
Confidence 8999999998754322 22345578999999998742 2467899999999999999999999887766666555
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
....... ......++.++.++|.+||..+|++||++.++++||||+...
T Consensus 228 ~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 276 (292)
T cd06644 228 AKSEPPT-LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVT 276 (292)
T ss_pred hcCCCcc-CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 4433211 112245778999999999999999999999999999997643
No 143
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=8.6e-42 Score=335.30 Aligned_cols=254 Identities=26% Similarity=0.445 Sum_probs=216.8
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|.+.+.||+|+||.||+|.+..+|+.||+|.+...... ......+.+|+.+++.+ +||||+++++++...+.+|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN-RREREEAIDEARVLAKL-DSSYIIRYYESFLDKGKLNIVM 78 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC-HHHHHHHHHHHHHHHhc-CCCCeehheeeeccCCEEEEEE
Confidence 478899999999999999999999999999998654332 34567789999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+++... ....+++..++.++.||+.||.|||+.||+||||||+||+++ .++.+
T Consensus 79 e~~~~~~L~~~l~~~---------------~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~---~~~~~ 140 (256)
T cd08529 79 EYAENGDLHKLLKMQ---------------RGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLD---AYDNV 140 (256)
T ss_pred EeCCCCcHHHHHHHh---------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEe---CCCCE
Confidence 999999999877532 235788999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCCC-ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+|+|||++........ .....|++.|+|||++.+. ++.++|||||||++|+|++|+.||...........+..+....
T Consensus 141 ~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 220 (256)
T cd08529 141 KIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPP 220 (256)
T ss_pred EEcccccceeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 9999999887654332 2345789999999988654 5889999999999999999999998887777666666543221
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
. ...++..+.++|.+||+.+|++||++.++++|||+
T Consensus 221 ~---~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 221 V---SQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred C---ccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 1 12577899999999999999999999999999995
No 144
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=5.7e-42 Score=338.65 Aligned_cols=257 Identities=29% Similarity=0.499 Sum_probs=217.0
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||+|.+..++..+|+|++...... .....+.+|+.+++.+ +||||+++++.+...+.+|+||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ--TSVDELRKEVQAMSQC-NHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc--hHHHHHHHHHHHHHhc-CCCCEEEEEEEEeeCCEEEEEE
Confidence 699999999999999999999889999999998765432 2567789999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
|++++++|.+.+.... ....+++..++.++.||+.||.|||++||+||||||+||+++ +++.+
T Consensus 79 e~~~~~~l~~~~~~~~--------------~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~---~~~~~ 141 (267)
T cd06610 79 PYLSGGSLLDIMKSSY--------------PRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLG---EDGSV 141 (267)
T ss_pred eccCCCcHHHHHHHhc--------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc---CCCCE
Confidence 9999999998775431 124689999999999999999999999999999999999998 46789
Q ss_pred eEEecCCCcccCCCCCc-----cccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 257 KATDFGLSDFIKPGKKF-----QDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~-----~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
+|+|||++......... ....|+..|+|||++... .+.++|+|||||++|+|++|+.||...+....+..+..
T Consensus 142 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~ 221 (267)
T cd06610 142 KIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQ 221 (267)
T ss_pred EEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhc
Confidence 99999998765443221 345789999999987654 58899999999999999999999988777666666655
Q ss_pred CCCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 330 NKPDFRRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 330 ~~~~~~~~~--~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
..+...... +..+++.+.+++.+||..||.+|||+.+++.||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 222 NDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred CCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 433221111 24678999999999999999999999999999998
No 145
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-43 Score=302.78 Aligned_cols=259 Identities=27% Similarity=0.474 Sum_probs=217.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
.|...++||+|.||+||+|+++.+++.||+|.+....... ..-....+||-+|+.|. |.|||+++++...++.+-+|+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrldddde-gvpssalreicllkelk-hknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDE-GVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCC-CCcHHHHHHHHHHHHhh-hcceeehhhhhccCceeEEeH
Confidence 4666788999999999999999999999999987654322 23456789999999996 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
|||. .+|..++. .-++.+..+.++.++.|+++||.++|++++.||||||.|.|++ .++.+
T Consensus 81 e~cd-qdlkkyfd----------------slng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin---~ngel 140 (292)
T KOG0662|consen 81 EFCD-QDLKKYFD----------------SLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLIN---RNGEL 140 (292)
T ss_pred HHhh-HHHHHHHH----------------hcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEec---cCCcE
Confidence 9994 45655442 2357899999999999999999999999999999999999998 58999
Q ss_pred eEEecCCCcccCCC-CCccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCC
Q 008127 257 KATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 257 kl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
||+|||+|+...-. .-+...+-|.+|++|.++.+. |++..|+||-|||+.|+.. |++.|.+.+.++.+..|...-.
T Consensus 141 kladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg 220 (292)
T KOG0662|consen 141 KLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLG 220 (292)
T ss_pred EecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhC
Confidence 99999999876533 345567889999999998763 6889999999999999997 8899999999999988876433
Q ss_pred CCCCCCCCC-------------------------CCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 333 DFRRKPWPS-------------------------ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 333 ~~~~~~~~~-------------------------~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
......||. ++..-+++++++|.-+|.+|++++++++||||.+..
T Consensus 221 ~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~s 290 (292)
T KOG0662|consen 221 TPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDFS 290 (292)
T ss_pred CCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccccC
Confidence 333333332 222357999999999999999999999999998743
No 146
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=8.6e-44 Score=331.16 Aligned_cols=267 Identities=28% Similarity=0.413 Sum_probs=209.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCC----CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-CCe
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANG----DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-DNY 171 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~----~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~~~ 171 (577)
.|+++..||+|.||.||+|..+.++ +.+|||.+...+-... ......+|+.+++.|+ |||++.+..+|.. +..
T Consensus 25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tG-iS~SAcREiaL~REl~-h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTG-ISMSACREIALLRELK-HPNVISLVKVFLSHDKK 102 (438)
T ss_pred HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCC-cCHHHHHHHHHHHHhc-CCcchhHHHHHhccCce
Confidence 5899999999999999999755543 3689999876533222 2345678999999995 9999999998877 889
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC-
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA- 250 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~- 250 (577)
+++++||.+. +|+..|... ...+...++...+..|++||+.|++|||++.|+||||||.|||+...
T Consensus 103 v~l~fdYAEh-DL~~II~fH------------r~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdg 169 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFH------------RASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDG 169 (438)
T ss_pred EEEEehhhhh-hHHHHHHHh------------ccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccC
Confidence 9999999964 888877644 22334679999999999999999999999999999999999999853
Q ss_pred CCCCCeeEEecCCCcccCCC----CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChh---
Q 008127 251 KEDSSLKATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED--- 321 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~----~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~--- 321 (577)
.+.|.|||+|||+|+.+... -....++-|.+|+|||.+.| .|++++||||+|||+.||+|-.+.|.+....
T Consensus 170 perG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~ 249 (438)
T KOG0666|consen 170 PERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKT 249 (438)
T ss_pred CccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhccc
Confidence 34599999999999876532 23456788999999998865 5799999999999999999999999664321
Q ss_pred ------HHHHHHHhCCCCCCCCCCC---------------------------------CCCHHHHHHHHHccccCcCCCC
Q 008127 322 ------GIFKEVLRNKPDFRRKPWP---------------------------------SISNSAKDFVKKLLVKDPRARL 362 (577)
Q Consensus 322 ------~~~~~i~~~~~~~~~~~~~---------------------------------~~s~~~~~li~~~l~~dP~~Rp 362 (577)
+.+..|+.--.......|| .-++...+|+.+||++||.+|+
T Consensus 250 ~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRI 329 (438)
T KOG0666|consen 250 KNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRI 329 (438)
T ss_pred CCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhc
Confidence 2333343311111111222 1344578999999999999999
Q ss_pred CHHHHhcCccccccCC
Q 008127 363 TAAQALSHPWVREGGD 378 (577)
Q Consensus 363 t~~~il~hp~f~~~~~ 378 (577)
|++++|+|+||++..-
T Consensus 330 ta~qAleh~yF~~d~l 345 (438)
T KOG0666|consen 330 TAEQALEHPYFTEDPL 345 (438)
T ss_pred cHHHHhcccccccCCC
Confidence 9999999999998643
No 147
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.5e-42 Score=352.00 Aligned_cols=257 Identities=22% Similarity=0.307 Sum_probs=203.9
Q ss_pred eeeeeccc--CCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 100 IGKLLGHG--QFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 100 ~~~~lG~G--~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
++++||+| +||+||++.++.+|+.||||++...... ......+.+|+.+++.+ +||||++++++|..++.+|+|||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e 79 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT-NEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELWVVTS 79 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhcc-HHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEECCEEEEEEe
Confidence 56789999 7899999999999999999998755332 23456678899999999 59999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
|+++|+|.+.+... ....+++..++.++.||+.||.|||+++|+||||||+|||++ .++.++
T Consensus 80 ~~~~~~l~~~~~~~---------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~---~~~~~~ 141 (327)
T cd08227 80 FMAYGSAKDLICTH---------------FMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS---VDGKVY 141 (327)
T ss_pred ccCCCcHHHHHHhh---------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEe---cCCcEE
Confidence 99999999877432 124588999999999999999999999999999999999998 467899
Q ss_pred EEecCCCcccCCC-C-------CccccccCCccccchhccc---CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 258 ATDFGLSDFIKPG-K-------KFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 258 l~DFGla~~~~~~-~-------~~~~~~gt~~y~aPE~~~~---~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
++|||.+...... . ......++..|+|||++.+ .++.++|||||||++|+|++|+.||...........
T Consensus 142 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~ 221 (327)
T cd08227 142 LSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE 221 (327)
T ss_pred EcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHH
Confidence 9999865433211 0 0112357788999999864 368899999999999999999999976554443333
Q ss_pred HHhCCCCCC------------------------------------------CCCCCCCCHHHHHHHHHccccCcCCCCCH
Q 008127 327 VLRNKPDFR------------------------------------------RKPWPSISNSAKDFVKKLLVKDPRARLTA 364 (577)
Q Consensus 327 i~~~~~~~~------------------------------------------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~ 364 (577)
...+..... ......+++.+.+||.+||+.||++|||+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~ 301 (327)
T cd08227 222 KLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSA 301 (327)
T ss_pred HhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCH
Confidence 322111000 00011356789999999999999999999
Q ss_pred HHHhcCcccccc
Q 008127 365 AQALSHPWVREG 376 (577)
Q Consensus 365 ~~il~hp~f~~~ 376 (577)
.++++||||+..
T Consensus 302 ~ell~~p~f~~~ 313 (327)
T cd08227 302 STLLNHSFFKQI 313 (327)
T ss_pred HHHhcChhhhhc
Confidence 999999999864
No 148
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=5.3e-42 Score=341.56 Aligned_cols=251 Identities=25% Similarity=0.386 Sum_probs=207.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.++||.|+||.||+|.+..+++.||+|.+.... .......+.+|+.++.++ +||||+++++++...+..++||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKC-DSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEECCEEEEEE
Confidence 5888999999999999999999999999999986542 233456788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|..+ ..+++..+..++.|++.||.|||+.||+|+||||+|||++ .++.+
T Consensus 79 e~~~~~~l~~~---------------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~---~~~~~ 134 (279)
T cd06619 79 EFMDGGSLDVY---------------------RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVN---TRGQV 134 (279)
T ss_pred ecCCCCChHHh---------------------hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEEC---CCCCE
Confidence 99999988531 3467888999999999999999999999999999999998 47899
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCCh-------hHHHHHHH
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE-------DGIFKEVL 328 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~-------~~~~~~i~ 328 (577)
||+|||++...... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||..... ......+.
T Consensus 135 ~l~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 213 (279)
T cd06619 135 KLCDFGVSTQLVNS-IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIV 213 (279)
T ss_pred EEeeCCcceecccc-cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHh
Confidence 99999999765432 2345689999999998865 468899999999999999999999965321 12222222
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.... ........++++.+||.+||+.+|.+||++.++++||||+...
T Consensus 214 ~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~ 260 (279)
T cd06619 214 DEDP--PVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYN 260 (279)
T ss_pred ccCC--CCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccccccc
Confidence 2211 1122345788999999999999999999999999999998753
No 149
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=5.7e-42 Score=342.55 Aligned_cols=263 Identities=29% Similarity=0.486 Sum_probs=211.7
Q ss_pred cccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE--
Q 008127 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE-- 167 (577)
Q Consensus 90 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~-- 167 (577)
......++|++.+.||+|+||.||+|.+..+++.+|+|++.... .....+.+|+.+++.+.+||||+++++++.
T Consensus 12 ~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 87 (286)
T cd06638 12 SFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKK 87 (286)
T ss_pred cCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence 34456678999999999999999999999999999999876432 123567889999999967999999999873
Q ss_pred ---cCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCc
Q 008127 168 ---DDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 244 (577)
Q Consensus 168 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~N 244 (577)
.++.+++||||+++++|.+.+... ......+++..++.++.|++.||.|||+.+|+||||||+|
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~-------------~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~n 154 (286)
T cd06638 88 DVKNGDQLWLVLELCNGGSVTDLVKGF-------------LKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNN 154 (286)
T ss_pred ccCCCCeEEEEEeecCCCCHHHHHHHh-------------hccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHh
Confidence 456799999999999998876432 1233568899999999999999999999999999999999
Q ss_pred EEeecCCCCCCeeEEecCCCcccCCCC-CccccccCCccccchhccc------CCCCCCchhhHHHHHHHHHhCCCCCCC
Q 008127 245 FLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWD 317 (577)
Q Consensus 245 ILl~~~~~~~~vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~------~~~~~~DiwSlG~il~el~tg~~Pf~~ 317 (577)
|+++ .++.+||+|||++....... ......|++.|+|||++.. .++.++|||||||++|+|++|+.||..
T Consensus 155 ili~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~ 231 (286)
T cd06638 155 ILLT---TEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLAD 231 (286)
T ss_pred EEEC---CCCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCC
Confidence 9998 46789999999987654322 2234579999999998742 357899999999999999999999987
Q ss_pred CChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 318 KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 318 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
......+..+...... .......++..+.+||.+||..||.+|||+.++++|+||
T Consensus 232 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 232 LHPMRALFKIPRNPPP-TLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred CchhHHHhhccccCCC-cccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 6654444333322111 111112357789999999999999999999999999997
No 150
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.5e-42 Score=343.05 Aligned_cols=257 Identities=33% Similarity=0.510 Sum_probs=216.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||.|+||.||+|.+..++..||+|.+.... ....+.+.+|+.+++++. ||||+++++.+..+..+|+|
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 80 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES---EEELEDFMVEIDILSECK-HPNIVGLYEAYFYENKLWIL 80 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC---HHHHHHHHHHHHHHHhCC-CCceeEEEEEEecCCeEEEE
Confidence 57999999999999999999998899999999986442 345577889999999995 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++++|.+++... ...+++..++.++.|++.||.|||+.||+|+||||+||+++ .++.
T Consensus 81 ~e~~~~~~L~~~~~~~----------------~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~---~~~~ 141 (280)
T cd06611 81 IEFCDGGALDSIMLEL----------------ERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLT---LDGD 141 (280)
T ss_pred eeccCCCcHHHHHHHh----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEC---CCCC
Confidence 9999999998866432 35689999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhccc------CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~------~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
++|+|||++...... .......||+.|+|||++.. .++.++|||||||++|+|++|+.||.+.........+.
T Consensus 142 ~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 221 (280)
T cd06611 142 VKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKIL 221 (280)
T ss_pred EEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHh
Confidence 999999998765332 22334578999999998742 24678999999999999999999998877666666665
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
....... .....++.++.++|.+||+.+|.+||++.++++||||+..
T Consensus 222 ~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 222 KSEPPTL-DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred cCCCCCc-CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 5432211 1224578899999999999999999999999999999875
No 151
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=4.7e-42 Score=342.47 Aligned_cols=256 Identities=28% Similarity=0.506 Sum_probs=210.7
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----- 168 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----- 168 (577)
....|++.+.||.|+||.||+|.+..+++.||+|++.... .....+..|+.++.++.+||||+++++++..
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 89 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE----DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPG 89 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh----HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccC
Confidence 4467999999999999999999999999999999886542 2446688999999999779999999999852
Q ss_pred -CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 169 -DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 169 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
...+|+||||+++|+|.+.+... ....+++..+..++.||+.||.|||+.||+||||||+||++
T Consensus 90 ~~~~~~iv~e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili 154 (282)
T cd06636 90 HDDQLWLVMEFCGAGSVTDLVKNT---------------KGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLL 154 (282)
T ss_pred CCCEEEEEEEeCCCCcHHHHHHHc---------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE
Confidence 46789999999999998876432 23557888999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCC-CCccccccCCccccchhcc------cCCCCCCchhhHHHHHHHHHhCCCCCCCCCh
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTE 320 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~ 320 (577)
+ .++.++|+|||++...... .......|++.|+|||.+. ..++.++|||||||++|+|++|..||.....
T Consensus 155 ~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~ 231 (282)
T cd06636 155 T---ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHP 231 (282)
T ss_pred C---CCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCH
Confidence 8 4778999999998765422 2234567999999999874 2357789999999999999999999977665
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
......+..... .......++.++.+||.+||..||.+|||+.++|+||||
T Consensus 232 ~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 232 MRALFLIPRNPP--PKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred HhhhhhHhhCCC--CCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 444443333211 112224578999999999999999999999999999997
No 152
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=3.8e-42 Score=343.07 Aligned_cols=241 Identities=17% Similarity=0.234 Sum_probs=204.0
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc----CCeEEEEEe
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----DNYVYIAME 177 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----~~~~~lv~e 177 (577)
..||+|++|.||+|.. +|+.||||.+.+.........+.+.+|+.+|+++ +||||+++++++.+ ...+++|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRI-DSNNILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhc-CCCCEEEEeeeEEecccCCCceEEEEE
Confidence 4699999999999975 7899999999765443334467788999999999 59999999999876 457899999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCCCe
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++|+|.+.+.. ...+++.....++.|++.||.|||+ .+++||||||+|||++ .++.+
T Consensus 103 y~~~g~L~~~l~~-----------------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~---~~~~~ 162 (283)
T PHA02988 103 YCTRGYLREVLDK-----------------EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVT---ENYKL 162 (283)
T ss_pred eCCCCcHHHHHhh-----------------CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEEC---CCCcE
Confidence 9999999987743 2568889999999999999999998 5999999999999998 47899
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhccc---CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
||+|||++....... ....||+.|+|||++.+ .++.++|||||||++|||++|+.||.+.+..+++..+......
T Consensus 163 kl~dfg~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~ 240 (283)
T PHA02988 163 KIICHGLEKILSSPP--FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNS 240 (283)
T ss_pred EEcccchHhhhcccc--ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCC
Confidence 999999998654322 23478999999999864 5689999999999999999999999988888888877665544
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+..+ ..+++++.+||.+||+.||.+|||+.++++
T Consensus 241 ~~~~--~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 241 LKLP--LDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred CCCC--CcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 3321 357899999999999999999999999975
No 153
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=8.1e-42 Score=335.47 Aligned_cols=255 Identities=25% Similarity=0.441 Sum_probs=218.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||+|.+..+++.+|||.+...... ......+.+|+.+++.+ +||||+++++.+...+.+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT-KDERLAAQNECQVLKLL-SHPNIIEYYENFLEDKALMIVM 78 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccc-cHHHHHHHHHHHHHhhC-CCCchhheeeeEecCCEEEEEE
Confidence 489999999999999999999999999999998765432 33467789999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+++... ....+++..+..++.|++.||.|||++||+|+||||+||+++. .+..+
T Consensus 79 e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~--~~~~~ 141 (256)
T cd08220 79 EYAPGGTLAEYIQKR---------------CNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDK--HKMVV 141 (256)
T ss_pred ecCCCCCHHHHHHHh---------------cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEE
Confidence 999999999877543 2345899999999999999999999999999999999999974 34578
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~ 335 (577)
||+|||++.............|++.|+|||.+.+. ++.++||||||+++|+|++|..||...+.......+......
T Consensus 142 ~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~-- 219 (256)
T cd08220 142 KIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFA-- 219 (256)
T ss_pred EEccCCCceecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCC--
Confidence 99999999877554444456789999999988754 578999999999999999999999888777777666654322
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 336 ~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.....+++.+.+++.+||..+|.+|||+.++++||||
T Consensus 220 -~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 220 -PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred -CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 1223578899999999999999999999999999997
No 154
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=7.3e-42 Score=341.14 Aligned_cols=257 Identities=31% Similarity=0.478 Sum_probs=215.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
.|++.+.||.|+||.||+|.+..++..+|+|.+.... ......+.+|+.+++.+ +||||+++++++...+..|+|+
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~~~v~ 81 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS---EEELEDYMVEIDILASC-DHPNIVKLLDAFYYENNLWILI 81 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC---HHHHHHHHHHHHHHHHC-CCCCeeeEEEEEeeCCEEEEEE
Confidence 4788999999999999999999999999999986543 34566788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|...+.. ....+++..+..++.||+.||.|||+.||+||||||+|||++ .++.+
T Consensus 82 e~~~~~~l~~~~~~----------------~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~---~~~~~ 142 (282)
T cd06643 82 EFCAGGAVDAVMLE----------------LERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFT---LDGDI 142 (282)
T ss_pred EecCCCcHHHHHHh----------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc---cCCCE
Confidence 99999998776532 235689999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCC-CCccccccCCccccchhccc------CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 257 KATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 257 kl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~------~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
||+|||++...... .......||+.|+|||++.. .++.++|||||||++|+|++|.+||...+..+....+..
T Consensus 143 kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~ 222 (282)
T cd06643 143 KLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAK 222 (282)
T ss_pred EEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhh
Confidence 99999998765322 22344578999999998742 246789999999999999999999988776666666654
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
...... .....++.++.+||.+||..||.+|||+.++++||||+...
T Consensus 223 ~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 269 (282)
T cd06643 223 SEPPTL-AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNS 269 (282)
T ss_pred cCCCCC-CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEeccC
Confidence 432211 11235788999999999999999999999999999999753
No 155
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.4e-41 Score=340.63 Aligned_cols=261 Identities=28% Similarity=0.486 Sum_probs=213.8
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC---
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--- 169 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--- 169 (577)
...++|.+.+.||+|+||.||+|.+..+++.+|+|++..... ....+.+|+.+++++.+||||+++++++...
T Consensus 19 ~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~ 94 (291)
T cd06639 19 DPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD----VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKL 94 (291)
T ss_pred CCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc----HHHHHHHHHHHHHHhcCCCCeEEEEEEEEecccc
Confidence 345789999999999999999999999999999999865421 3456788999999997799999999998643
Q ss_pred --CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 170 --NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
+.+|+||||+++|+|.+.+... ......+++..++.++.|++.||.|||+.+|+||||||+||++
T Consensus 95 ~~~~~~lv~ey~~~~sL~~~~~~~-------------~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili 161 (291)
T cd06639 95 VGGQLWLVLELCNGGSVTELVKGL-------------LICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILL 161 (291)
T ss_pred CCCeeEEEEEECCCCcHHHHHHHh-------------hhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE
Confidence 4689999999999998877432 1134568999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCC-CccccccCCccccchhcccC------CCCCCchhhHHHHHHHHHhCCCCCCCCCh
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK------SGPESDVWSIGVITYILLCGRRPFWDKTE 320 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~------~~~~~DiwSlG~il~el~tg~~Pf~~~~~ 320 (577)
+ .++.+||+|||++....... ......|+..|+|||++... ++.++|||||||++|+|++|+.||.....
T Consensus 162 ~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~ 238 (291)
T cd06639 162 T---TEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP 238 (291)
T ss_pred c---CCCCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH
Confidence 8 46789999999988654322 22345789999999987532 47899999999999999999999987766
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q 008127 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~ 374 (577)
...+..+........ .....++..+.+||.+||..+|++||++.++++||||+
T Consensus 239 ~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 239 VKTLFKIPRNPPPTL-LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred HHHHHHHhcCCCCCC-CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 555555544332211 11234677899999999999999999999999999995
No 156
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.6e-42 Score=363.19 Aligned_cols=251 Identities=22% Similarity=0.343 Sum_probs=200.7
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
...|.+.+.||+|+||.||+|.+..+++.||||.... ..+.+|+++|++| +|||||++++++...+..++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L-~HpnIv~l~~~~~~~~~~~l 237 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRL-SHPAVLALLDVRVVGGLTCL 237 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHC-CCCCCCcEEEEEEECCEEEE
Confidence 3479999999999999999999999999999996422 2356899999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||++. ++|.+++... ...+++..++.++.||+.||.|||++|||||||||+|||++ .++
T Consensus 238 v~e~~~-~~L~~~l~~~----------------~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~---~~~ 297 (461)
T PHA03211 238 VLPKYR-SDLYTYLGAR----------------LRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVN---GPE 297 (461)
T ss_pred EEEccC-CCHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEEC---CCC
Confidence 999994 6887766432 24689999999999999999999999999999999999998 467
Q ss_pred CeeEEecCCCcccCCCCC---ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCC--------hhH
Q 008127 255 SLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT--------EDG 322 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~--------~~~ 322 (577)
.+||+|||+++....... ....+||+.|+|||++.+. ++.++|||||||++|||++|..|+.... ...
T Consensus 298 ~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~ 377 (461)
T PHA03211 298 DICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQ 377 (461)
T ss_pred CEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHH
Confidence 899999999986543221 2245799999999988654 5889999999999999999887664322 112
Q ss_pred HHHHHHhCCC---C------------------------CCCCCCC---CCCHHHHHHHHHccccCcCCCCCHHHHhcCcc
Q 008127 323 IFKEVLRNKP---D------------------------FRRKPWP---SISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372 (577)
Q Consensus 323 ~~~~i~~~~~---~------------------------~~~~~~~---~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~ 372 (577)
+...+..... . +....|. .++..+.+||.+||+.||.+|||+.|+|+|||
T Consensus 378 l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~ 457 (461)
T PHA03211 378 ILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPL 457 (461)
T ss_pred HHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcc
Confidence 2222211110 0 1111122 35668999999999999999999999999999
Q ss_pred ccc
Q 008127 373 VRE 375 (577)
Q Consensus 373 f~~ 375 (577)
|+.
T Consensus 458 f~~ 460 (461)
T PHA03211 458 FQS 460 (461)
T ss_pred cCC
Confidence 974
No 157
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=4.7e-42 Score=338.23 Aligned_cols=252 Identities=32% Similarity=0.529 Sum_probs=210.6
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||.|+||.||+|.+..+|+.||||++.+...........+..|..++....+||||+++++++...+.+|+|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 56999999999999999999999999987654322223344566666655555799999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
++|.+.+.. ...+++..+..++.||+.||.|||+.+++||||+|+||+++ .++.+||+||
T Consensus 82 ~~L~~~l~~-----------------~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~---~~~~~~l~df 141 (260)
T cd05611 82 GDCASLIKT-----------------LGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLID---QTGHLKLTDF 141 (260)
T ss_pred CCHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCcEEEeec
Confidence 999886643 25689999999999999999999999999999999999998 4778999999
Q ss_pred CCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCC
Q 008127 262 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340 (577)
Q Consensus 262 Gla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~ 340 (577)
|++..... .....|++.|+|||.+.+. ++.++||||||+++|+|++|..||...+....+..+......++.....
T Consensus 142 g~~~~~~~---~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (260)
T cd05611 142 GLSRNGLE---NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKE 218 (260)
T ss_pred ccceeccc---cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccc
Confidence 99876432 2345688999999987654 4889999999999999999999998888777777776655554444445
Q ss_pred CCCHHHHHHHHHccccCcCCCCC---HHHHhcCcccccc
Q 008127 341 SISNSAKDFVKKLLVKDPRARLT---AAQALSHPWVREG 376 (577)
Q Consensus 341 ~~s~~~~~li~~~l~~dP~~Rpt---~~~il~hp~f~~~ 376 (577)
.+++.+.++|.+||..+|.+||+ +.+++.||||+..
T Consensus 219 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 219 FCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred cCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence 68899999999999999999995 5799999999764
No 158
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=4.5e-42 Score=343.15 Aligned_cols=256 Identities=28% Similarity=0.512 Sum_probs=209.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|.++.+|+.||+|++...... ....+.+.+|+.+++++. ||||+++++++.....+++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~v 78 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDD-PVIKKIALREIRMLKQLK-HPNLVNLIEVFRRKRKLHLV 78 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccC-ccccHHHHHHHHHHHhCC-CCCEeeeeeEEeeCCEEEEE
Confidence 3699999999999999999999999999999988654321 223456789999999994 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++++.|...+. ....+++..++.++.||+.||.|||++||+||||||+||+++ .++.
T Consensus 79 ~e~~~~~~l~~~~~-----------------~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~---~~~~ 138 (286)
T cd07847 79 FEYCDHTVLNELEK-----------------NPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILIT---KQGQ 138 (286)
T ss_pred EeccCccHHHHHHh-----------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEc---CCCc
Confidence 99998876655332 235689999999999999999999999999999999999998 4678
Q ss_pred eeEEecCCCcccCCCC-CccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 256 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+||+|||++....... ......++..|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+.....
T Consensus 139 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~ 218 (286)
T cd07847 139 IKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLG 218 (286)
T ss_pred EEECccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 9999999998765433 3345578899999998764 357899999999999999999999987765554433322100
Q ss_pred C-------------------CCC--------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 333 D-------------------FRR--------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 333 ~-------------------~~~--------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
. .+. ..++.++..+.+||.+||..+|++|||+.+++.||||
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 219 DLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred CCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 0 000 0124567889999999999999999999999999998
No 159
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-44 Score=342.13 Aligned_cols=257 Identities=27% Similarity=0.474 Sum_probs=226.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|.++.+||+|+||+|.+|..+.+.+.||||++.+.-.......+--..|-++|.....-|.++++..+|+.-+.+|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 46889999999999999999999999999999998765544444555566777776555578899999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+.||+|.-++.+. +.+.+..+..++..|+-||-+||++|||+||||.+||||+. .++
T Consensus 429 MEyvnGGDLMyhiQQ~-----------------GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~---eGH 488 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQV-----------------GKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDS---EGH 488 (683)
T ss_pred EEEecCchhhhHHHHh-----------------cccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEecc---CCc
Confidence 9999999998777544 88999999999999999999999999999999999999994 899
Q ss_pred eeEEecCCCcc-cCCCCCccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDF-IKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~-~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
|||+|||+++. +..+....++||||.|+|||++. ..|+..+|+||+||+||||+.|++||.+.++++++..|+.....
T Consensus 489 iKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvs 568 (683)
T KOG0696|consen 489 IKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVS 568 (683)
T ss_pred eEeeecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCc
Confidence 99999999975 33455667899999999999875 56788999999999999999999999999999999999998887
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCH-----HHHhcCcccccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTA-----AQALSHPWVREG 376 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~-----~~il~hp~f~~~ 376 (577)
++ ..+|.++.++++.+|.+.|.+|... .+|-.||||+..
T Consensus 569 yP----KslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~i 612 (683)
T KOG0696|consen 569 YP----KSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRI 612 (683)
T ss_pred Cc----ccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhc
Confidence 76 4689999999999999999999843 689999999875
No 160
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=5.1e-42 Score=340.72 Aligned_cols=256 Identities=30% Similarity=0.525 Sum_probs=216.4
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||+|.+..+++.||+|.+..... ......+.+|+.+++.+. ||||+++++++.++..+|+|+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA--EDEIEDIQQEIQFLSQCR-SPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc--chHHHHHHHHHHHHHHcC-CCCeeeeeEEEEECCeEEEEE
Confidence 68899999999999999999999999999999865432 234567889999999995 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+++. ...+++..++.++.|++.||.|||+.+++||||+|+||+++ .++.+
T Consensus 79 e~~~~~~L~~~~~------------------~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~ 137 (274)
T cd06609 79 EYCGGGSCLDLLK------------------PGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLS---EEGDV 137 (274)
T ss_pred EeeCCCcHHHHHh------------------hcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCE
Confidence 9999999988663 13689999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCC-CCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+|+|||++...... .......|++.|+|||.+.+ .++.++|||||||++|+|++|..||...........+.......
T Consensus 138 ~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~ 217 (274)
T cd06609 138 KLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPS 217 (274)
T ss_pred EEcccccceeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCC
Confidence 99999999876543 23345678999999998765 46889999999999999999999998766655555444432211
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
. ....++..+.+++.+||..+|++|||+.++++||||+....
T Consensus 218 ~--~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 259 (274)
T cd06609 218 L--EGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKK 259 (274)
T ss_pred C--cccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCc
Confidence 1 11227889999999999999999999999999999988654
No 161
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.6e-42 Score=346.21 Aligned_cols=255 Identities=27% Similarity=0.512 Sum_probs=205.0
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||+|++..+|+.||+|.+..... .......+.+|+.+++++ +||||+++++++.+.+.+|+|+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 78 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKEL-KHKNIVRLYDVLHSDKKLTLVF 78 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhc-CCCCeeeHHHHhccCCceEEEE
Confidence 58999999999999999999999999999999865432 122335677899999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++ ++|.+.+... ...+++..++.++.||+.||.|||++||+||||||+||+++ .++.+
T Consensus 79 e~~~-~~l~~~~~~~----------------~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~---~~~~~ 138 (284)
T cd07839 79 EYCD-QDLKKYFDSC----------------NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLIN---KNGEL 138 (284)
T ss_pred ecCC-CCHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEc---CCCcE
Confidence 9996 5777655321 35689999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCC-CCccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCC-CChhHHHHHHHhCC-
Q 008127 257 KATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNK- 331 (577)
Q Consensus 257 kl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~-~~~~~~~~~i~~~~- 331 (577)
||+|||++...... .......+++.|+|||++.+. ++.++|||||||++|+|++|..||.. .+..+.+..+....
T Consensus 139 ~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~ 218 (284)
T cd07839 139 KLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLG 218 (284)
T ss_pred EECccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhC
Confidence 99999999765432 223345688999999987653 47899999999999999999888644 34334333332210
Q ss_pred -------------CCCC-----------CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 332 -------------PDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 332 -------------~~~~-----------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
+.+. ....+.+++++.+||.+||..||.+|||+.+++.||||
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 219 TPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred CCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 0000 01123578899999999999999999999999999998
No 162
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=2.4e-42 Score=339.90 Aligned_cols=253 Identities=28% Similarity=0.504 Sum_probs=215.4
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||+|.+..+++.||+|.+.+.........+.+.+|+++++++ +||||+++++.+.....+|+|+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL-NHPFLVNLWYSFQDEENMYLVV 79 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhC-CCCChHHHHHhhcCCCeEEEEE
Confidence 489999999999999999999999999999999866544445677899999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++|++|.+++... ..+++..+..++.||+.||.|||++|++|+||+|+||+++ .++.+
T Consensus 80 e~~~~~~L~~~l~~~-----------------~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~---~~~~~ 139 (258)
T cd05578 80 DLLLGGDLRYHLSQK-----------------VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLD---EQGHV 139 (258)
T ss_pred eCCCCCCHHHHHHhc-----------------CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEc---CCCCE
Confidence 999999998876422 5788999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCCh--hHHHHHHHhCCCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNKPD 333 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~--~~~~~~i~~~~~~ 333 (577)
+|+|||++.............|+..|+|||++.+. ++.++|+||||+++|+|++|..||...+. ...+......
T Consensus 140 ~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--- 216 (258)
T cd05578 140 HITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET--- 216 (258)
T ss_pred EEeecccccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc---
Confidence 99999999876554444556789999999988654 58899999999999999999999987663 2233233221
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCH--HHHhcCccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTA--AQALSHPWV 373 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~--~~il~hp~f 373 (577)
......+.++..+.++|.+||..||.+||++ .++++||||
T Consensus 217 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 217 ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 1112224578999999999999999999999 999999998
No 163
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-44 Score=353.94 Aligned_cols=237 Identities=27% Similarity=0.404 Sum_probs=202.5
Q ss_pred eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
++-||.|+.|.||+|+ ..++.||||++..- -..+|.-|++|. ||||+.+.++|.....+|||||||+
T Consensus 129 LeWlGSGaQGAVF~Gr--l~netVAVKKV~el----------kETdIKHLRkLk-H~NII~FkGVCtqsPcyCIiMEfCa 195 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGR--LHNETVAVKKVREL----------KETDIKHLRKLK-HPNIITFKGVCTQSPCYCIIMEFCA 195 (904)
T ss_pred hhhhccCcccceeeee--ccCceehhHHHhhh----------hhhhHHHHHhcc-CcceeeEeeeecCCceeEEeeeccc
Confidence 4459999999999996 55789999987432 235777889995 9999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
.|-|.+.|.. ...++......|..+|+.|++|||.+.|||||||.-||||+ .+..|||+|
T Consensus 196 ~GqL~~VLka-----------------~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs---~~d~VKIsD 255 (904)
T KOG4721|consen 196 QGQLYEVLKA-----------------GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILIS---YDDVVKISD 255 (904)
T ss_pred cccHHHHHhc-----------------cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEee---ccceEEecc
Confidence 9999987754 37788999999999999999999999999999999999998 478899999
Q ss_pred cCCCcccCCCCCccccccCCccccchhcccCC-CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008127 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339 (577)
Q Consensus 261 FGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 339 (577)
||-++........-.++||..|||||++...+ +.|+||||||||||||+||..||.+-....++.-+=.+...+ +..
T Consensus 256 FGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~L--pvP 333 (904)
T KOG4721|consen 256 FGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHL--PVP 333 (904)
T ss_pred ccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccc--cCc
Confidence 99998876655556789999999999999877 899999999999999999999997766555443333332222 223
Q ss_pred CCCCHHHHHHHHHccccCcCCCCCHHHHhcCcc
Q 008127 340 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372 (577)
Q Consensus 340 ~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~ 372 (577)
..++..++-||+.||...|..||++.++|.|-=
T Consensus 334 stcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 334 STCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred ccCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 568889999999999999999999999999843
No 164
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.3e-42 Score=344.15 Aligned_cols=260 Identities=28% Similarity=0.487 Sum_probs=215.0
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
...+|.+.+.||.|+||.||+|.+..+|+.||+|.+..... ...+.+.+|+.+++.+ +||||+++++++...+.+|
T Consensus 17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~ 92 (297)
T cd06656 17 PKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ---PKKELIINEILVMREN-KNPNIVNYLDSYLVGDELW 92 (297)
T ss_pred hhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc---chHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCEEE
Confidence 34689999999999999999999999999999999865432 2346688999999998 5999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+||||+++++|.+++. ...+++..+..++.|++.||.|||+.||+||||||+|||++ .+
T Consensus 93 lv~e~~~~~~L~~~~~------------------~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~---~~ 151 (297)
T cd06656 93 VVMEYLAGGSLTDVVT------------------ETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLG---MD 151 (297)
T ss_pred EeecccCCCCHHHHHH------------------hCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CC
Confidence 9999999999988663 24578889999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCCCC-ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 254 SSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+.++|+|||++........ .....|++.|+|||.+.+. ++.++|||||||++|+|++|..||.+.+.......+....
T Consensus 152 ~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~ 231 (297)
T cd06656 152 GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG 231 (297)
T ss_pred CCEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCC
Confidence 8899999999876543322 2345789999999988654 5789999999999999999999997765543333222221
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~ 379 (577)
.. .......++..+.+|+.+||..+|.+||++.++++||||+.....
T Consensus 232 ~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (297)
T cd06656 232 TP-ELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPL 278 (297)
T ss_pred CC-CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcccccc
Confidence 11 111224577889999999999999999999999999999876543
No 165
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.8e-41 Score=333.15 Aligned_cols=254 Identities=28% Similarity=0.481 Sum_probs=219.0
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||.+++..+++.+|+|.+...... ......+.+|+.+++++ +||||+++++++.+.+.+++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~~~ 78 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS-EKERRDALNEIVILSLL-QHPNIIAYYNHFMDDNTLLIEM 78 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccc-hhHHHHHHHHHHHHHhC-CCCCeeEEEeEEecCCeEEEEE
Confidence 589999999999999999999999999999998655432 34566788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
|||++++|.+.+... ....+++..+..++.|++.||.|||+.|++||||+|+||+++ .++.+
T Consensus 79 e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~---~~~~~ 140 (256)
T cd08221 79 EYANGGTLYDKIVRQ---------------KGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLT---KAGLI 140 (256)
T ss_pred EecCCCcHHHHHHhc---------------cccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEe---CCCCE
Confidence 999999999877432 235689999999999999999999999999999999999998 47789
Q ss_pred eEEecCCCcccCCCC-CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
||+|||++....... ......|++.|+|||++.+ .++.++|||||||++|+|++|..||......+....+..+....
T Consensus 141 kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 220 (256)
T cd08221 141 KLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTP 220 (256)
T ss_pred EECcCcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 999999997664333 2345678999999998765 45788999999999999999999998888888777777654332
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
. .+.++.++.++|.+||..+|.+|||+.++++|||+
T Consensus 221 ~---~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 221 V---VSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred C---ccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 2 24578999999999999999999999999999996
No 166
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=5.7e-42 Score=341.00 Aligned_cols=254 Identities=30% Similarity=0.452 Sum_probs=208.2
Q ss_pred ecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCCCc
Q 008127 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183 (577)
Q Consensus 104 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 183 (577)
||.|+||.||+|.+..+|+.||+|.+.+...........+.+|+.+++.+. ||||+++++++...+.+|+||||+++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVS-SRFIVSLAYAFETKDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCC-CCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence 699999999999999999999999987654332334556678999999995 9999999999999999999999999999
Q ss_pred hhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCC
Q 008127 184 LLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263 (577)
Q Consensus 184 L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGl 263 (577)
|.+++... ....+++..++.++.|++.||.|||+.|++||||+|+||+++ .++.+||+|||+
T Consensus 80 L~~~l~~~---------------~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~---~~~~~~l~dfg~ 141 (277)
T cd05577 80 LKYHIYNV---------------GEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLD---DHGNVRISDLGL 141 (277)
T ss_pred HHHHHHHc---------------CcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEEccCcc
Confidence 98877543 224689999999999999999999999999999999999998 478899999999
Q ss_pred CcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCC
Q 008127 264 SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 342 (577)
Q Consensus 264 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 342 (577)
+.............++..|+|||++.+ .++.++|||||||++|+|++|+.||...........+............+.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (277)
T cd05577 142 AVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKF 221 (277)
T ss_pred hhhhccCCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccC
Confidence 877654444445678899999998764 4578999999999999999999999765442222222222222222233457
Q ss_pred CHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 343 SNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 343 s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
++.+.++|.+||..||.+|| ++.+++.||||+..
T Consensus 222 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~ 260 (277)
T cd05577 222 SPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDL 260 (277)
T ss_pred CHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcC
Confidence 89999999999999999999 99999999999764
No 167
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.5e-43 Score=352.73 Aligned_cols=259 Identities=29% Similarity=0.487 Sum_probs=224.7
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
-|..++.||-|+||+|.+++...|...||+|.+.+...........+..|.+||..- +.++||+||-.|.+.+.+|+||
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA-Dn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc-CCcceEEEEEEeccCCceEEEE
Confidence 588899999999999999998889999999999998887778888999999999987 7999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
+|++||++...|.+. +-|.|..++.++.++.+|+++.|..|+|||||||+||||+ .+|+|
T Consensus 709 dYIPGGDmMSLLIrm-----------------gIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILID---rdGHI 768 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRM-----------------GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILID---RDGHI 768 (1034)
T ss_pred eccCCccHHHHHHHh-----------------ccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEc---cCCce
Confidence 999999999988655 6789999999999999999999999999999999999999 58999
Q ss_pred eEEecCCCccc---------CCCCC----------------------------------ccccccCCccccchhcc-cCC
Q 008127 257 KATDFGLSDFI---------KPGKK----------------------------------FQDIVGSAYYVAPEVLK-RKS 292 (577)
Q Consensus 257 kl~DFGla~~~---------~~~~~----------------------------------~~~~~gt~~y~aPE~~~-~~~ 292 (577)
||+||||+.-+ ..+.. ....+||+.|+|||++. ..+
T Consensus 769 KLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~ 848 (1034)
T KOG0608|consen 769 KLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGY 848 (1034)
T ss_pred eeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCc
Confidence 99999998532 11100 01247999999999876 467
Q ss_pred CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCC---CHHHHhc
Q 008127 293 GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL---TAAQALS 369 (577)
Q Consensus 293 ~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp---t~~~il~ 369 (577)
+.-||+||.|||||||+.|++||.+.++.+...+++.....+.......+|+++.++|.++.+ +++.|. .++++..
T Consensus 849 ~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKa 927 (1034)
T KOG0608|consen 849 TQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKA 927 (1034)
T ss_pred cccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-Chhhhhcccchhhhhc
Confidence 889999999999999999999999988887777776655444444456799999999999876 699998 4778999
Q ss_pred CccccccC
Q 008127 370 HPWVREGG 377 (577)
Q Consensus 370 hp~f~~~~ 377 (577)
||||+...
T Consensus 928 HpfFkgID 935 (1034)
T KOG0608|consen 928 HPFFKGID 935 (1034)
T ss_pred Cccccccc
Confidence 99999753
No 168
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5e-42 Score=339.38 Aligned_cols=254 Identities=27% Similarity=0.436 Sum_probs=207.2
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
..+|++.+.||+|+||.||+|.+..+++.||+|++..... .....+.+|+.+++.+ +||||+++++++...+.+|+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~~e~~~l~~~-~h~~ii~~~~~~~~~~~~~i 83 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG---DDFSLIQQEIFMVKEC-KHCNIVAYFGSYLSREKLWI 83 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc---chHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCCEEEE
Confidence 3579999999999999999999999999999999865421 2345678999999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+.+.. ...+++..+..++.|++.||.|||+.||+||||||+||+++ .++
T Consensus 84 v~e~~~~~~L~~~~~~-----------------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~---~~~ 143 (267)
T cd06646 84 CMEYCGGGSLQDIYHV-----------------TGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLT---DNG 143 (267)
T ss_pred EEeCCCCCcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCC
Confidence 9999999999887643 25689999999999999999999999999999999999997 477
Q ss_pred CeeEEecCCCcccCCCC-CccccccCCccccchhcc----cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 255 SLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~----~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
.+||+|||++....... ......|++.|+|||.+. ..++.++|||||||++|+|++|..||...........+..
T Consensus 144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~ 223 (267)
T cd06646 144 DVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK 223 (267)
T ss_pred CEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeec
Confidence 89999999998654322 223457899999999874 2347789999999999999999999966544332222222
Q ss_pred CCCCCCC-CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcc
Q 008127 330 NKPDFRR-KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372 (577)
Q Consensus 330 ~~~~~~~-~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~ 372 (577)
.....+. .....++..+.+||.+||..+|++|||++++|+|+|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 224 SNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred CCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 1111111 111346789999999999999999999999999998
No 169
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=9.1e-42 Score=336.55 Aligned_cols=250 Identities=31% Similarity=0.545 Sum_probs=212.8
Q ss_pred ecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCCCc
Q 008127 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183 (577)
Q Consensus 104 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 183 (577)
||.|+||.||+|++..+++.||+|++.+.........+.+.+|+.+++.+ +||||+++++.+.++..+|+|+||+++++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEEC-NHPFIVKLYRTFKDKKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhC-CCCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence 79999999999999999999999999766544344567899999999999 59999999999999999999999999999
Q ss_pred hhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCC
Q 008127 184 LLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263 (577)
Q Consensus 184 L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGl 263 (577)
|.+.+... ..+++..+..++.||+.||.|||+++++|+||+|+||+++ .++.++|+|||+
T Consensus 80 L~~~l~~~-----------------~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~---~~~~~~l~df~~ 139 (262)
T cd05572 80 LWTILRDR-----------------GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLD---SNGYVKLVDFGF 139 (262)
T ss_pred HHHHHhhc-----------------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEc---CCCCEEEeeCCc
Confidence 98877432 5589999999999999999999999999999999999998 478899999999
Q ss_pred CcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCC--hhHHHHHHHhCCCCCCCCCCC
Q 008127 264 SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT--EDGIFKEVLRNKPDFRRKPWP 340 (577)
Q Consensus 264 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~--~~~~~~~i~~~~~~~~~~~~~ 340 (577)
+.............|++.|+|||.+.+ .++.++|+||||+++|+|++|..||.... ....+..+......... ..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~ 217 (262)
T cd05572 140 AKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEF--PN 217 (262)
T ss_pred ccccCcccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCC--Cc
Confidence 987755433345678999999998764 45889999999999999999999998776 55666666642222221 13
Q ss_pred CCCHHHHHHHHHccccCcCCCCC-----HHHHhcCcccccc
Q 008127 341 SISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 376 (577)
Q Consensus 341 ~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~ 376 (577)
..++++.++|.+||..+|.+||+ +.++++||||++.
T Consensus 218 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 218 YIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred ccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence 35789999999999999999999 9999999999864
No 170
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.3e-41 Score=339.40 Aligned_cols=260 Identities=25% Similarity=0.335 Sum_probs=208.4
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||+|+||.||+|.+..+|+.||||++...... .....+..|+.++.+..+||||+++++++..++.+|+||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS--QEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc--HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 689999999999999999999999999999998764321 233456667776555557999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-CceeccCCCCcEEeecCCCCCC
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~-~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||++ |+|.+.+... ......+++..++.++.||+.||.|||++ +++||||||+||+++ .++.
T Consensus 80 e~~~-~~l~~~l~~~-------------~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~---~~~~ 142 (283)
T cd06617 80 EVMD-TSLDKFYKKV-------------YDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLIN---RNGQ 142 (283)
T ss_pred hhhc-ccHHHHHHHh-------------ccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEEC---CCCC
Confidence 9996 6777665432 12335789999999999999999999997 999999999999998 4789
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhccc-----CCCCCCchhhHHHHHHHHHhCCCCCCCC-ChhHHHHHHHh
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-----KSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLR 329 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwSlG~il~el~tg~~Pf~~~-~~~~~~~~i~~ 329 (577)
+||+|||++.............|+..|+|||++.+ .++.++|+|||||++|+|++|+.||... ...+.+..+..
T Consensus 143 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 222 (283)
T cd06617 143 VKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVE 222 (283)
T ss_pred EEEeecccccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHh
Confidence 99999999987644333334578999999998753 3478899999999999999999999653 22333444443
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
... ...+...+|.++.++|.+||..+|.+|||+.++++||||....
T Consensus 223 ~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 223 EPS--PQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred cCC--CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 221 1111234789999999999999999999999999999999754
No 171
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=8.9e-42 Score=339.89 Aligned_cols=251 Identities=24% Similarity=0.361 Sum_probs=199.7
Q ss_pred eecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHh--cCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL--AGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 103 ~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l--~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
.||+|+||.||++.+..+|+.||+|.+.+.............+|..+++.+ .+||||+.+++++..++.+++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999999999999999998765433222233344555444433 269999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
+|+|.+++.. ...+++..+..++.|++.||.|||+.+|+||||||+|||++ .++.++|+|
T Consensus 81 ~~~L~~~i~~-----------------~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~---~~~~~~l~d 140 (279)
T cd05633 81 GGDLHYHLSQ-----------------HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISD 140 (279)
T ss_pred CCCHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEEC---CCCCEEEcc
Confidence 9999876643 25689999999999999999999999999999999999998 478899999
Q ss_pred cCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChh--HHHHHHHhCCCCCCC
Q 008127 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED--GIFKEVLRNKPDFRR 336 (577)
Q Consensus 261 FGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~--~~~~~i~~~~~~~~~ 336 (577)
||++....... .....||+.|+|||.+.. .++.++||||+||++|+|++|..||...... ....... .....
T Consensus 141 fg~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~---~~~~~ 216 (279)
T cd05633 141 LGLACDFSKKK-PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT---LTVNV 216 (279)
T ss_pred CCcceeccccC-ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHh---hcCCc
Confidence 99987554322 234579999999998753 3588999999999999999999999754321 1121111 11222
Q ss_pred CCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCccccccC
Q 008127 337 KPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREGG 377 (577)
Q Consensus 337 ~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~~ 377 (577)
...+.+++++.++|.+||..||.+|| |+.++++||||+...
T Consensus 217 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~ 262 (279)
T cd05633 217 ELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID 262 (279)
T ss_pred CCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence 23356789999999999999999999 699999999998754
No 172
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.1e-42 Score=342.97 Aligned_cols=262 Identities=28% Similarity=0.393 Sum_probs=213.5
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++++.||+|+||.||+|.+..+|..||+|.+.... .......+.+|+.+++++ +||||+++++.+...+.+|+||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKA-VSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhc-CCCcHHhhhhheecCCeEEEEE
Confidence 6899999999999999999999999999999886432 233457788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCCC
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||+++++|..++... .....+++..+..++.||+.||.|||+ .+|+||||||+||+++. ++.
T Consensus 79 e~~~~~~l~~~~~~~--------------~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~---~~~ 141 (286)
T cd06622 79 EYMDAGSLDKLYAGG--------------VATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNG---NGQ 141 (286)
T ss_pred eecCCCCHHHHHHhc--------------cccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECC---CCC
Confidence 999999997765321 012478999999999999999999997 59999999999999984 788
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcccC-------CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-------SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
+||+|||++...... ......|++.|+|||.+.+. ++.++|||||||++|+|++|..||...........+.
T Consensus 142 ~~l~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~ 220 (286)
T cd06622 142 VKLCDFGVSGNLVAS-LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLS 220 (286)
T ss_pred EEEeecCCcccccCC-ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHH
Confidence 999999998765422 22345788999999987532 3678999999999999999999997665544443322
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCC
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~ 379 (577)
......+...++.++.++.+||.+||..+|.+||++.+++.||||......
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~ 271 (286)
T cd06622 221 AIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271 (286)
T ss_pred HHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence 211111222234588999999999999999999999999999999876543
No 173
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.4e-41 Score=341.41 Aligned_cols=256 Identities=30% Similarity=0.521 Sum_probs=216.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|++.+.||.|+||.||+|.+..+|+.||+|.+..... ...+.+.+|+.+++.+ +||||+++++++...+.+|+|
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 94 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ---PKKELIINEILVMKEL-KNPNIVNFLDSFLVGDELFVV 94 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC---chHHHHHHHHHHHHhc-CCCceeeeeeeEecCceEEEE
Confidence 479999999999999999999999999999999865432 2356788999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
+||+++++|.+.+. ...+++.++..++.|++.||.|||+.|++||||||+||+++ .++.
T Consensus 95 ~e~~~~~~L~~~~~------------------~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~---~~~~ 153 (296)
T cd06655 95 MEYLAGGSLTDVVT------------------ETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLG---MDGS 153 (296)
T ss_pred EEecCCCcHHHHHH------------------hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCC
Confidence 99999999987652 24578999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCCC-ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+||+|||++........ .....|++.|+|||.+.+. ++.++|||||||++|+|++|+.||.+.........+......
T Consensus 154 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~ 233 (296)
T cd06655 154 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP 233 (296)
T ss_pred EEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCc
Confidence 99999999876543322 2345789999999987654 688999999999999999999999887765555444433221
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
....+..+++.+.+||.+||..||.+|||+.+++.||||+...
T Consensus 234 -~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 234 -ELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred -ccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 1122346789999999999999999999999999999998654
No 174
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.1e-41 Score=342.08 Aligned_cols=262 Identities=26% Similarity=0.408 Sum_probs=209.7
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe-----
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY----- 171 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~----- 171 (577)
+|++.+.||.|+||.||+|.+..+|+.||||.+..... .......+.+|+.+++.+.+||||+++++++.....
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMD-EEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcc-ccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 69999999999999999999999999999998765422 112335678899999999778999999999886655
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.|+||||+++ +|.+++.... ......+++..++.++.||+.||.|||++||+||||||+||+++.
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~------------~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~-- 145 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNG------------RGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDK-- 145 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhc------------ccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEec--
Confidence 8999999975 7888765331 011356899999999999999999999999999999999999983
Q ss_pred CCCCeeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
.++.+||+|||++...... .......+++.|+|||++.+ .++.++|||||||++|+|++|..||.+.+....+..+.
T Consensus 146 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~ 225 (295)
T cd07837 146 QKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIF 225 (295)
T ss_pred CCCeEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 3678999999998765322 22233467889999998754 35889999999999999999999998877666555443
Q ss_pred hCCCCCC------------------------CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q 008127 329 RNKPDFR------------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374 (577)
Q Consensus 329 ~~~~~~~------------------------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~ 374 (577)
....... ....+.+++++.+||.+||.+||.+|||+.+++.||||+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 226 KLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred HHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 3211000 001245788999999999999999999999999999985
No 175
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.5e-41 Score=335.96 Aligned_cols=253 Identities=30% Similarity=0.514 Sum_probs=210.3
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCc------hhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL------PIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~------~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
+|.+.+.||.|+||.||+|.+..+++.||+|.+....... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 79 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL-QHENIVQYLGSSLDAD 79 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCC
Confidence 4778899999999999999999899999999886543221 12346788999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||++|++||||+|+||+++
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~-----------------~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~-- 140 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNN-----------------YGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVD-- 140 (267)
T ss_pred ccEEEEEecCCCCHHHHHHh-----------------ccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEc--
Confidence 99999999999999887643 25688899999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCC-------CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhH
Q 008127 251 KEDSSLKATDFGLSDFIKPGK-------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG 322 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~ 322 (577)
.++.+||+|||++....... ......|+..|+|||.+.+ .++.++|||||||++|+|++|..||.+.+...
T Consensus 141 -~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~ 219 (267)
T cd06628 141 -NKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ 219 (267)
T ss_pred -CCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH
Confidence 47889999999987664211 1123468899999998765 45788999999999999999999998766555
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 323 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 323 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
....+..... ......++..+.++|.+||+.||.+||++.++++||||
T Consensus 220 ~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 220 AIFKIGENAS---PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred HHHHHhccCC---CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 4444433211 12224578999999999999999999999999999997
No 176
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=7.8e-42 Score=341.43 Aligned_cols=256 Identities=32% Similarity=0.521 Sum_probs=212.3
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||+|.+..+|..||+|++...... ......+.+|+.+++++. ||||+++++++.....+|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~ 78 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-GGIPNQALREIKALQACQ-HPYVVKLLDVFPHGSGFVLVM 78 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc-chhhHHHHHHHHHHHhCC-CCCCcceeeEEecCCeeEEEe
Confidence 489999999999999999999999999999998765421 234567899999999995 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+ +++|.+.+... ...+++..++.++.||+.||.|||+.||+|+||||+||+++. ++.+
T Consensus 79 e~~-~~~L~~~~~~~----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~---~~~~ 138 (286)
T cd07832 79 EYM-PSDLSEVLRDE----------------ERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISA---DGVL 138 (286)
T ss_pred ccc-CCCHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcC---CCcE
Confidence 999 99998876432 256899999999999999999999999999999999999984 7889
Q ss_pred eEEecCCCcccCCCC--CccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 257 KATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 257 kl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+|+|||++....... ......|+..|+|||++.+. ++.++||||+||++|+|++|.+||.+......+..++....
T Consensus 139 ~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~ 218 (286)
T cd07832 139 KIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLG 218 (286)
T ss_pred EEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcC
Confidence 999999998765432 23455789999999987543 47899999999999999999888877766555554443111
Q ss_pred C-------------------CCC-------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q 008127 333 D-------------------FRR-------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374 (577)
Q Consensus 333 ~-------------------~~~-------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~ 374 (577)
. ++. ..++..+.++.+||.+||..+|.+|||+.++|+||||.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 219 TPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred CCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 0 000 01235678899999999999999999999999999984
No 177
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.9e-41 Score=333.00 Aligned_cols=254 Identities=25% Similarity=0.532 Sum_probs=216.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||++.+..+|+.||+|.+...... ......+.+|+.+++.+ +||||+++++++...+..|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS-PKEREESRKEVAVLSNM-KHPNIVQYQESFEENGNLYIVM 78 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC-hHHHHHHHHHHHHHHhC-CCCCeeeeEeeecCCCeEEEEE
Confidence 589999999999999999999999999999998754332 23456789999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+.+... ....+++..++.++.|++.||.|||++|++|+||+|+||+++ .++.+
T Consensus 79 e~~~~~~l~~~~~~~---------------~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~---~~~~~ 140 (256)
T cd08218 79 DYCEGGDLYKKINAQ---------------RGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT---KDGTI 140 (256)
T ss_pred ecCCCCcHHHHHHhc---------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCE
Confidence 999999998877432 234678999999999999999999999999999999999998 47789
Q ss_pred eEEecCCCcccCCCCC-ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+|+|||++........ .....|++.|+|||++.+. .+.++|+|||||++|+|++|+.||......+....++.+....
T Consensus 141 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 220 (256)
T cd08218 141 KLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPP 220 (256)
T ss_pred EEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCC
Confidence 9999999976543322 2234688999999987654 5789999999999999999999998888777777776654321
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
....++.++.++|.+||+.+|.+||++.++++||||
T Consensus 221 ---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 221 ---VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred ---CcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 124578899999999999999999999999999997
No 178
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3e-43 Score=318.43 Aligned_cols=254 Identities=24% Similarity=0.374 Sum_probs=206.5
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-----C
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-----D 169 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-----~ 169 (577)
++||++.+.||+|||+.||++....++..||+|++.... ....+...+|++..+++ +|||+++++++... .
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~---~~~~e~~~rEid~~rkf-~s~~vl~l~dh~l~~~~D~~ 95 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS---QEDIEEALREIDNHRKF-NSPNVLRLVDHQLREEKDGK 95 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccc---hHHHHHHHHHHHHHHhh-CCcchHHHHHHHHHhhccCc
Confidence 358999999999999999999999999999999997765 34678899999999999 59999999887543 3
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC--ceeccCCCCcEEe
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLF 247 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~--iiHrDlKp~NILl 247 (577)
...||++.|+..|+|.+.+... ..++..+++.++..|+.+|++||++||+.. ++||||||.|||+
T Consensus 96 ~~~yll~Pyy~~Gsl~d~i~~~-------------k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILl 162 (302)
T KOG2345|consen 96 HEAYLLLPYYKRGSLLDEIERL-------------KIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILL 162 (302)
T ss_pred eeEEEEeehhccccHHHHHHHH-------------hhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEe
Confidence 4699999999999999988644 234568999999999999999999999998 9999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCC----CC---cc---ccccCCccccchhcccC----CCCCCchhhHHHHHHHHHhCCC
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPG----KK---FQ---DIVGSAYYVAPEVLKRK----SGPESDVWSIGVITYILLCGRR 313 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~----~~---~~---~~~gt~~y~aPE~~~~~----~~~~~DiwSlG~il~el~tg~~ 313 (577)
+ +.+.++|+|||.++...-. .. .+ ....|..|+|||.+.-+ .++++|||||||+||.|+.|..
T Consensus 163 s---~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~s 239 (302)
T KOG2345|consen 163 S---DSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGES 239 (302)
T ss_pred c---CCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCC
Confidence 8 4789999999998764311 11 11 23578999999998743 3789999999999999999999
Q ss_pred CCCCCCh--hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 314 PFWDKTE--DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 314 Pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
||...-. ..+...+..+...+++.. .+|+.+.+||+.||+.||.+||++.+++.+
T Consensus 240 Pfe~~~~~GgSlaLAv~n~q~s~P~~~--~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 240 PFERIYQQGGSLALAVQNAQISIPNSS--RYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred cchHHhhcCCeEEEeeeccccccCCCC--CccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 9932111 111122333344444432 388999999999999999999999999864
No 179
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.2e-41 Score=339.33 Aligned_cols=253 Identities=29% Similarity=0.468 Sum_probs=206.2
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC--CeEEEE
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NYVYIA 175 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~~lv 175 (577)
|++.+.||+|+||.||+|.+..+++.||+|.+...... .......+|+.++.++.+||||+++++++.+. +.+++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKS--LEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCC--chhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 67889999999999999999999999999988654221 12233457899999997799999999999987 899999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++ |+|.+.+... ...+++..++.++.||+.||.|||+.|++||||||+||+++ . +.
T Consensus 79 ~e~~~-~~l~~~l~~~----------------~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~---~-~~ 137 (282)
T cd07831 79 FELMD-MNLYELIKGR----------------KRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIK---D-DI 137 (282)
T ss_pred EecCC-ccHHHHHHhc----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEc---C-CC
Confidence 99996 5887766432 25689999999999999999999999999999999999998 3 88
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcc--cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC-
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP- 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~- 332 (577)
+||+|||++.............+++.|+|||++. +.++.++|||||||++|+|++|..||.+.+..+....+.....
T Consensus 138 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~ 217 (282)
T cd07831 138 LKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGT 217 (282)
T ss_pred eEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCC
Confidence 9999999998765544445567899999999764 2358899999999999999999999988776555444332110
Q ss_pred -----------------CCCCC-------CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 333 -----------------DFRRK-------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 333 -----------------~~~~~-------~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.++.. ..+.++.++.+||.+||.++|.+|||+.++++||||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 218 PDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred CCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 00000 013567899999999999999999999999999998
No 180
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=9.8e-42 Score=346.14 Aligned_cols=258 Identities=27% Similarity=0.420 Sum_probs=193.4
Q ss_pred eeeecccCCeEEEEEEEcC--CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE--cCCeEEEEE
Q 008127 101 GKLLGHGQFGYTYVATDKA--NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE--DDNYVYIAM 176 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~~--~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~--~~~~~~lv~ 176 (577)
+.+||+|+||.||+|+++. ++..||+|.+.... ....+.+|+.+++.+ +||||+++++++. .+..+|+||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----ISMSACREIALLREL-KHPNVIALQKVFLSHSDRKVWLLF 79 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----CcHHHHHHHHHHHhC-CCCCeeeEEEEEeccCCCeEEEEE
Confidence 3579999999999998653 66899999886543 224577899999999 5999999999885 456789999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC-CCCCC
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA-KEDSS 255 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~-~~~~~ 255 (577)
||++ ++|.+.+....... .......+++..++.++.||+.||.|||+.||+||||||+|||+... ..++.
T Consensus 80 e~~~-~~l~~~~~~~~~~~--------~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~ 150 (317)
T cd07867 80 DYAE-HDLWHIIKFHRASK--------ANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGR 150 (317)
T ss_pred eeeC-CcHHHHHHhhhccc--------cCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCc
Confidence 9996 57877664321100 01122458899999999999999999999999999999999999532 24678
Q ss_pred eeEEecCCCcccCCCC----CccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChh--------
Q 008127 256 LKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED-------- 321 (577)
Q Consensus 256 vkl~DFGla~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~-------- 321 (577)
+||+|||+++...... ......||+.|+|||++.+ .++.++|||||||++|+|+||++||......
T Consensus 151 ~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~ 230 (317)
T cd07867 151 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFH 230 (317)
T ss_pred EEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccccccccccccccc
Confidence 9999999998664322 2335678999999998865 3588999999999999999999999654321
Q ss_pred -HHHHHHHhC--------------CCCCCC--------------------CCCCCCCHHHHHHHHHccccCcCCCCCHHH
Q 008127 322 -GIFKEVLRN--------------KPDFRR--------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQ 366 (577)
Q Consensus 322 -~~~~~i~~~--------------~~~~~~--------------------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~ 366 (577)
..+..+... .+.++. ......+..+.+||.+||+.||.+|||+.|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e 310 (317)
T cd07867 231 HDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQ 310 (317)
T ss_pred HHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHH
Confidence 111111110 000000 000123456889999999999999999999
Q ss_pred HhcCccc
Q 008127 367 ALSHPWV 373 (577)
Q Consensus 367 il~hp~f 373 (577)
+|+||||
T Consensus 311 ~l~hp~f 317 (317)
T cd07867 311 ALQDPYF 317 (317)
T ss_pred HhcCCCC
Confidence 9999998
No 181
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.1e-41 Score=338.95 Aligned_cols=256 Identities=26% Similarity=0.463 Sum_probs=214.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
..|++.+.||.|+||.||+|.+..++..||||.+..... ......+.+|+.+++.+ +||||+++++++.+++.+|+|
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKGTKLWII 80 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc--HHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEEEE
Confidence 468889999999999999999999999999999875432 23467789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++||+|.+++. ...+++..+..++.|++.||.|||+.+++|+||+|+||+++ .++.
T Consensus 81 ~e~~~~~~L~~~i~------------------~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~---~~~~ 139 (277)
T cd06640 81 MEYLGGGSALDLLR------------------AGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS---EQGD 139 (277)
T ss_pred EecCCCCcHHHHHh------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEc---CCCC
Confidence 99999999988663 24578889999999999999999999999999999999998 4778
Q ss_pred eeEEecCCCcccCCCCC-ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
++|+|||++........ .....++..|+|||++.+. .+.++|+|||||++|+|++|..||...........+....+
T Consensus 140 ~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~- 218 (277)
T cd06640 140 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP- 218 (277)
T ss_pred EEEcccccceeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCC-
Confidence 99999999976543322 2334688899999987654 58899999999999999999999987776655544433221
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
......++..+.+++.+||..+|.+||++.++++||||.....
T Consensus 219 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 261 (277)
T cd06640 219 --PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAK 261 (277)
T ss_pred --CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcch
Confidence 1222356788999999999999999999999999999987654
No 182
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.7e-41 Score=336.69 Aligned_cols=259 Identities=30% Similarity=0.519 Sum_probs=212.8
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC---
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN--- 170 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--- 170 (577)
..++|++.+.||.|+||.||+|.++.+++.||+|++.... .....+.+|+.+++++.+||||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence 3468999999999999999999999899999999987553 244678999999999977999999999997544
Q ss_pred ---eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 171 ---YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 171 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
.+|+||||+++++|.+.+... ......+++..++.++.|++.||.|||+.+++|+||+|+||++
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~-------------~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~ 146 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGL-------------RKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILL 146 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHH-------------hhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE
Confidence 589999999999998876432 1124678999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCC-CccccccCCccccchhccc------CCCCCCchhhHHHHHHHHHhCCCCCCCCCh
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTE 320 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~------~~~~~~DiwSlG~il~el~tg~~Pf~~~~~ 320 (577)
+ .++.+||+|||++....... ......|++.|+|||++.. .++.++|||||||++|+|++|..||.....
T Consensus 147 ~---~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 223 (275)
T cd06608 147 T---KNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHP 223 (275)
T ss_pred c---cCCeEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccch
Confidence 8 47889999999987654322 2234578999999998753 246789999999999999999999987665
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
......+........ .....++..+.+||.+||..||.+|||+.++++|||+
T Consensus 224 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 224 MRALFKIPRNPPPTL-KSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred HHHHHHhhccCCCCC-CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 555555554332211 1112367899999999999999999999999999996
No 183
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.5e-41 Score=343.52 Aligned_cols=260 Identities=26% Similarity=0.412 Sum_probs=210.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC--CeEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NYVY 173 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~~ 173 (577)
.+|++.+.||.|+||.||+|.+..+|+.||+|.+....... .....+.+|+.+++++. ||||+++++++... +.++
T Consensus 7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIPISSLREITLLLNLR-HPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-CCcchhhHHHHHHHhCC-CCCCcceEEEEecCCCCeEE
Confidence 47999999999999999999999999999999986543211 12234568999999994 99999999998754 5789
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+||||+. ++|.+.+... ...+++..++.++.||+.||.|||+.|++||||||+||+++ .+
T Consensus 85 lv~e~~~-~~l~~~l~~~----------------~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~ 144 (309)
T cd07845 85 LVMEYCE-QDLASLLDNM----------------PTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLT---DK 144 (309)
T ss_pred EEEecCC-CCHHHHHHhc----------------ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CC
Confidence 9999996 4777655321 25689999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 254 SSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
+.+||+|||++...... .......+++.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+..+.+..+...
T Consensus 145 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~ 224 (309)
T cd07845 145 GCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQL 224 (309)
T ss_pred CCEEECccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 88999999999876533 22233456888999998764 3588999999999999999999999988877777666542
Q ss_pred CCCCCC-------------------CC-------CCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 331 KPDFRR-------------------KP-------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 331 ~~~~~~-------------------~~-------~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
...... .. ...+++.+.+||.+||..||++|||+.+++.||||+..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~ 297 (309)
T cd07845 225 LGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKP 297 (309)
T ss_pred cCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCC
Confidence 111000 00 123578899999999999999999999999999998654
No 184
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.7e-41 Score=335.68 Aligned_cols=248 Identities=25% Similarity=0.423 Sum_probs=198.0
Q ss_pred ceeeeeee--cccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 97 RYTIGKLL--GHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 97 ~y~~~~~l--G~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.|.+.+.+ |.|+||.||++.++.++..+|+|.+...... . .|+.+...+.+||||++++++|..++.+|+
T Consensus 15 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~------~--~e~~~~~~~~~h~~iv~~~~~~~~~~~~~i 86 (267)
T PHA03390 15 NCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN------A--IEPMVHQLMKDNPNFIKLYYSVTTLKGHVL 86 (267)
T ss_pred hhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc------h--hhHHHHHHhhcCCCEEEEEEEEecCCeeEE
Confidence 46666655 9999999999999999999999998654321 1 133333334479999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+++... ..+++..++.++.||+.||.|||+.|++||||||+||+++. ++
T Consensus 87 v~e~~~~~~L~~~l~~~-----------------~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~---~~ 146 (267)
T PHA03390 87 IMDYIKDGDLFDLLKKE-----------------GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDR---AK 146 (267)
T ss_pred EEEcCCCCcHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeC---CC
Confidence 99999999999877432 47899999999999999999999999999999999999984 44
Q ss_pred -CeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 255 -SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 -~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
.++|+|||++...... ....|+..|+|||++.+ .++.++|||||||++|+|++|..||.................
T Consensus 147 ~~~~l~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 223 (267)
T PHA03390 147 DRIYLCDYGLCKIIGTP---SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ 223 (267)
T ss_pred CeEEEecCccceecCCC---ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh
Confidence 8999999998765432 23468999999998865 458889999999999999999999976544332211111111
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCC-HHHHhcCccccc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLT-AAQALSHPWVRE 375 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt-~~~il~hp~f~~ 375 (577)
......++.+++.+.+||.+||+.+|.+||+ ++++|+||||+.
T Consensus 224 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 224 QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred cccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 2222333568899999999999999999996 599999999973
No 185
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.4e-41 Score=352.15 Aligned_cols=267 Identities=24% Similarity=0.278 Sum_probs=208.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCC-----CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANG-----DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~-----~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
++|++.+.||+|+||.||+|++..+| ..||||++..... ......+.+|+.+++.+.+||||++++++|...+
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH--TDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC--HHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 47999999999999999999865444 5799999865432 2345678899999999966999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhh----------------------------------------------------
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLT---------------------------------------------------- 198 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~---------------------------------------------------- 198 (577)
.+|+|||||++|+|.+++..........
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS 195 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence 9999999999999999986542110000
Q ss_pred -hhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCCc---c
Q 008127 199 -SAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---Q 274 (577)
Q Consensus 199 -~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~~---~ 274 (577)
...........++++..++.++.||+.||.|||++||+||||||+|||++ +++.+||+|||+++........ .
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~---~~~~~kL~DfGla~~~~~~~~~~~~~ 272 (374)
T cd05106 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLT---DGRVAKICDFGLARDIMNDSNYVVKG 272 (374)
T ss_pred cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEe---CCCeEEEeeceeeeeccCCcceeecc
Confidence 00000011224588999999999999999999999999999999999998 4788999999999765432221 1
Q ss_pred ccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHH
Q 008127 275 DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKK 352 (577)
Q Consensus 275 ~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ 352 (577)
...+++.|+|||++. +.++.++|||||||++|+|++ |+.||........+..+......... ...+++++.+++.+
T Consensus 273 ~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~ 350 (374)
T cd05106 273 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSR--PDFAPPEIYSIMKM 350 (374)
T ss_pred CCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccC--CCCCCHHHHHHHHH
Confidence 234567899999875 456899999999999999997 99999876655555555444322222 23468999999999
Q ss_pred ccccCcCCCCCHHHHhc
Q 008127 353 LLVKDPRARLTAAQALS 369 (577)
Q Consensus 353 ~l~~dP~~Rpt~~~il~ 369 (577)
||..||.+|||+.++++
T Consensus 351 cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 351 CWNLEPTERPTFSQISQ 367 (374)
T ss_pred HcCCChhhCcCHHHHHH
Confidence 99999999999999875
No 186
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=2.7e-41 Score=333.73 Aligned_cols=254 Identities=28% Similarity=0.449 Sum_probs=208.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEeccccc---CchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM---ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
+|++.+.||.|+||.||+|.+ .+|+.+|||.+..... ........+.+|+++++.+ +||||+++++++.+.+.++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~ 78 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL-KHVNIVQYLGTCLDDNTIS 78 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc-CCCCEeeEeeEeecCCeEE
Confidence 478889999999999999986 5788999998864321 1223456789999999999 5999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+|+||+++++|.+++... ..+++..+..++.|++.||.|||+.+|+|+||+|+||+++ .+
T Consensus 79 lv~e~~~~~~L~~~l~~~-----------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~ 138 (265)
T cd06631 79 IFMEFVPGGSISSILNRF-----------------GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLM---PN 138 (265)
T ss_pred EEEecCCCCcHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEEC---CC
Confidence 999999999998877432 5688999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCC-------CCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 254 SSLKATDFGLSDFIKP-------GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~-------~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
+.++|+|||++..... ........|+..|+|||++.+. ++.++|||||||++|+|++|..||...+......
T Consensus 139 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~ 218 (265)
T cd06631 139 GIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMF 218 (265)
T ss_pred CeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHH
Confidence 8899999999875421 1112345789999999988654 5789999999999999999999998766554444
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.+....... ......++.++.++|.+||..+|.+|||+.++++||||
T Consensus 219 ~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 219 YIGAHRGLM-PRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred HhhhccCCC-CCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 443322111 12234578999999999999999999999999999997
No 187
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=3.1e-41 Score=334.68 Aligned_cols=256 Identities=28% Similarity=0.498 Sum_probs=210.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccC-------chhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI-------LPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~-------~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
+|.+.+.||.|+||.||+|.+..+|+.||+|.+...... .....+.+.+|+.+++.+ +||||+++++++...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~ 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL-DHLNIVQYLGFETTE 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhc-CCCCcceEEEEeccC
Confidence 588999999999999999999989999999987542111 111345688999999999 599999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
+.+++||||+++++|.+.+... ..+++..+..++.||+.||.|||+++++||||+|+||+++
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~-----------------~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~- 142 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTY-----------------GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVD- 142 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhc-----------------cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEc-
Confidence 9999999999999998876432 5688999999999999999999999999999999999998
Q ss_pred CCCCCCeeEEecCCCcccCCCC---CccccccCCccccchhcccC---CCCCCchhhHHHHHHHHHhCCCCCCCCChhHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDGI 323 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~---~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~ 323 (577)
.++.++|+|||++....... ......|+..|+|||++... ++.++|+||||+++|+|++|..||......+.
T Consensus 143 --~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~ 220 (272)
T cd06629 143 --ADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAA 220 (272)
T ss_pred --CCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHH
Confidence 47899999999987643211 12345688999999987642 58899999999999999999999976655544
Q ss_pred HHHHHhCC--CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 324 FKEVLRNK--PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 324 ~~~i~~~~--~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
...+.... ..++....+.++..+.++|.+||..+|.+|||+.++|+||||
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 221 MFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred HHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 44433222 222223335678999999999999999999999999999997
No 188
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.8e-41 Score=333.10 Aligned_cols=252 Identities=29% Similarity=0.515 Sum_probs=211.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||.|+||.||+|.+..+++.||+|.+.... ..+.+.+|+++++.+ +||||+++++++.....+|++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~ 76 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQC-DSPYIVKYYGSYFKNTDLWIV 76 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhC-CCCcEeeeeeeeecCCcEEEE
Confidence 57999999999999999999999889999999986542 267899999999999 699999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
+||+++++|.+.+... ...+++..++.++.|++.||.|||+.+|+||||+|+||+++ .++.
T Consensus 77 ~e~~~~~~L~~~l~~~----------------~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~---~~~~ 137 (256)
T cd06612 77 MEYCGAGSVSDIMKIT----------------NKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLN---EEGQ 137 (256)
T ss_pred EecCCCCcHHHHHHhC----------------ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEC---CCCc
Confidence 9999999998876422 35689999999999999999999999999999999999998 4778
Q ss_pred eeEEecCCCcccCCCC-CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+||+|||++....... ......|+..|+|||++.+. ++.++|||||||++|+|++|+.||...........+......
T Consensus 138 ~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 217 (256)
T cd06612 138 AKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPP 217 (256)
T ss_pred EEEcccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCC
Confidence 9999999998765433 22345688999999988654 578999999999999999999999876655444333322211
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.....+.++..+.++|.+||..||.+|||+.++|.||||
T Consensus 218 -~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 218 -TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred -CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 111123467899999999999999999999999999997
No 189
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=4.4e-41 Score=332.52 Aligned_cols=254 Identities=28% Similarity=0.489 Sum_probs=206.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEeccccc--CchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--CCeE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM--ILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYV 172 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~ 172 (577)
.|++.+.||+|+||.||+|.+..++..||+|.+..... ........+.+|+.+++++ +||||+++++++.. ...+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL-QHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHc-CCCCeeeEEEEEEcCCCCEE
Confidence 58899999999999999999999999999998865432 1123456788999999999 59999999998875 4678
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
++++||+++++|.+.+... ..+++..++.++.||+.||.|||+++|+||||||+||+++ .
T Consensus 82 ~l~~e~~~~~~L~~~l~~~-----------------~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~---~ 141 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAY-----------------GALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRD---S 141 (266)
T ss_pred EEEEeCCCCCcHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---C
Confidence 9999999999998877432 5688999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCC----CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~----~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
++.+||+|||++...... .......++..|+|||.+.+. ++.++|||||||++|+|++|+.||...........+
T Consensus 142 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~ 221 (266)
T cd06651 142 AGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKI 221 (266)
T ss_pred CCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHH
Confidence 778999999998765321 112235688999999988654 588999999999999999999999876554444443
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~ 374 (577)
...... ......+++.+.+++ +||..+|++||++.++++||||+
T Consensus 222 ~~~~~~--~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 222 ATQPTN--PQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred hcCCCC--CCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 332211 111234678889999 57778999999999999999996
No 190
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=3.7e-41 Score=331.95 Aligned_cols=254 Identities=30% Similarity=0.491 Sum_probs=212.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||.|+||.||+|.+..+++.+|+|.+..... .....+.+|+.+++++ +||||+++++++...+.+|++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l~ 78 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG---DDFEIIQQEISMLKEC-RHPNIVAYFGSYLRRDKLWIV 78 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch---hhHHHHHHHHHHHHhC-CCCChhceEEEEEeCCEEEEE
Confidence 579999999999999999999999999999999875532 2567889999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++++|.+++... ...+++..++.++.|++.||.|||+++|+|+||||+||+++ .++.
T Consensus 79 ~e~~~~~~l~~~~~~~----------------~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~ 139 (262)
T cd06613 79 MEYCGGGSLQDIYQVT----------------RGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLT---EDGD 139 (262)
T ss_pred EeCCCCCcHHHHHHhh----------------ccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEEC---CCCC
Confidence 9999999998866432 25689999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCC-CccccccCCccccchhccc----CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 256 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 256 vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~----~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
+||+|||++....... ......++..|+|||.+.+ .++.++|||||||++|+|++|..||.+.+.......+...
T Consensus 140 ~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~ 219 (262)
T cd06613 140 VKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKS 219 (262)
T ss_pred EEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Confidence 9999999987654322 2345678999999998764 3578899999999999999999999887665554444433
Q ss_pred CCCCCC-CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcc
Q 008127 331 KPDFRR-KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372 (577)
Q Consensus 331 ~~~~~~-~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~ 372 (577)
...... .....++.++.+||.+||..+|..|||+.+++.|||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 220 NFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred cCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 211111 112345778999999999999999999999999998
No 191
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.2e-41 Score=334.88 Aligned_cols=258 Identities=23% Similarity=0.397 Sum_probs=208.4
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCc---hhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL---PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~---~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
+|+..+.||+|+||.||+|.+..+++.||+|++....... ......+.+|+.+++++. ||||+++++++.+.+.++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~ 79 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLN-HPHIIRMLGATCEDSHFN 79 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcC-CCceehhhceeccCCeEE
Confidence 3788899999999999999999999999999986543211 224577899999999995 999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+|+||+++++|.+.+... ..+++..++.++.||+.||.|||++|++||||||+||+++. .+
T Consensus 80 ~v~e~~~~~~L~~~l~~~-----------------~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~--~~ 140 (268)
T cd06630 80 LFVEWMAGGSVSHLLSKY-----------------GAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDS--TG 140 (268)
T ss_pred EEEeccCCCcHHHHHHHh-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CC
Confidence 999999999998876432 56889999999999999999999999999999999999974 33
Q ss_pred CCeeEEecCCCcccCCCCC-----ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 254 SSLKATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~-----~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
..+||+|||++........ .....||..|+|||.+.+ .++.++|||||||++|+|++|..||...........+
T Consensus 141 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~ 220 (268)
T cd06630 141 QRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALI 220 (268)
T ss_pred CEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHH
Confidence 4699999999876643211 123468899999998765 4588999999999999999999999654433222222
Q ss_pred HhCCC-CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q 008127 328 LRNKP-DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374 (577)
Q Consensus 328 ~~~~~-~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~ 374 (577)
..... .......+.+++++.+++.+||..+|.+|||+.++++||||+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 221 FKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred HHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 21111 111122235788999999999999999999999999999985
No 192
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.8e-41 Score=341.02 Aligned_cols=261 Identities=30% Similarity=0.442 Sum_probs=212.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccC--chhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI--LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
+|.+.+.||.|+||.||+|.+..+|+.||||.+...... .......+..|+.+++.+. ||||+++++++.+.+.+++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l 79 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK-HPNIIGLLDVFGHKSNINL 79 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcC-CCCChhhhheeecCCEEEE
Confidence 488899999999999999999999999999998765432 1223455778999999995 9999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+ +|+|.+.+... ...+++..++.++.||+.||.|||++||+|+||||+||+++ .++
T Consensus 80 v~e~~-~~~L~~~i~~~----------------~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~---~~~ 139 (298)
T cd07841 80 VFEFM-ETDLEKVIKDK----------------SIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIA---SDG 139 (298)
T ss_pred EEccc-CCCHHHHHhcc----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEc---CCC
Confidence 99999 88998876422 13689999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 255 SLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
.+||+|||++...... .......+++.|+|||.+.+ .++.++|||||||++|+|++|.+||.+....+.+..+....
T Consensus 140 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~ 219 (298)
T cd07841 140 VLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEAL 219 (298)
T ss_pred CEEEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHc
Confidence 8999999999876543 22334467889999998754 35788999999999999999988887766555554443211
Q ss_pred CCCC------------------------CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 332 PDFR------------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 332 ~~~~------------------------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.... ...+..++..+.+||.+||..+|.+|||+.+++.||||++...
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~ 290 (298)
T cd07841 220 GTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPA 290 (298)
T ss_pred CCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCC
Confidence 0000 0012345778999999999999999999999999999998654
No 193
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.1e-41 Score=340.51 Aligned_cols=256 Identities=27% Similarity=0.476 Sum_probs=209.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||.|+||.||+|.+..+++.||+|.+...... ....+.+.+|+++++.+ +||||+++++++..++..|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 78 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDD-KMVKKIAMREIRMLKQL-RHENLVNLIEVFRRKKRLYLV 78 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCc-chhhHHHHHHHHHHHhc-CCcchhhHHHhcccCCeEEEE
Confidence 3699999999999999999999989999999988654332 23456688999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++++.|.+... ....+++..++.++.||+.||.|||+.||+||||+|+||+++ .++.
T Consensus 79 ~e~~~~~~l~~~~~-----------------~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~---~~~~ 138 (286)
T cd07846 79 FEFVDHTVLDDLEK-----------------YPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVS---QSGV 138 (286)
T ss_pred EecCCccHHHHHHh-----------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCCc
Confidence 99999887765332 224589999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
++|+|||++...... .......++..|+|||++.+ .++.++|||||||++|+|++|++||......+....+.....
T Consensus 139 ~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~ 218 (286)
T cd07846 139 VKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLG 218 (286)
T ss_pred EEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhC
Confidence 999999998765433 22344678999999998764 347889999999999999999999977665444333332100
Q ss_pred CC-------------------C--------CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 333 DF-------------------R--------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 333 ~~-------------------~--------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.+ + ...++.++..+.+|+.+||..+|.+||++.++++||||
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 219 NLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred CCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 00 0 01134678899999999999999999999999999998
No 194
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.9e-41 Score=351.42 Aligned_cols=268 Identities=24% Similarity=0.300 Sum_probs=207.4
Q ss_pred cceeeeeeecccCCeEEEEEEE-----cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~-----~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
++|++.+.||+|+||.||+|++ ..++..||||++..... ....+.+.+|+.++..+.+||||+++++++...+
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC--cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 4799999999999999999974 34567899999864432 2345678899999999966999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhh--------h--------------------------------------------
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTL--------T-------------------------------------------- 198 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~--------~-------------------------------------------- 198 (577)
..++|||||++|+|.+++......... .
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG 192 (375)
T ss_pred cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence 999999999999999998653210000 0
Q ss_pred ------hhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCC
Q 008127 199 ------SAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 272 (577)
Q Consensus 199 ------~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~ 272 (577)
............+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++........
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~---~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLT---HGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEE---CCCcEEEecCccceeccCccc
Confidence 00000111234688999999999999999999999999999999999998 467899999999986543322
Q ss_pred c---cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008127 273 F---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 347 (577)
Q Consensus 273 ~---~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 347 (577)
. ....++..|+|||++.+ .++.++|||||||++|+|++ |..||............+....... .....+.++.
T Consensus 270 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~ 347 (375)
T cd05104 270 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRML--SPECAPSEMY 347 (375)
T ss_pred ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCC--CCCCCCHHHH
Confidence 1 12345667999998765 46889999999999999998 8999987665544444444332211 1234678999
Q ss_pred HHHHHccccCcCCCCCHHHHhcC
Q 008127 348 DFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 348 ~li~~~l~~dP~~Rpt~~~il~h 370 (577)
+||.+||..||++|||+.++++.
T Consensus 348 ~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 348 DIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred HHHHHHccCChhHCcCHHHHHHH
Confidence 99999999999999999999863
No 195
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.1e-41 Score=341.50 Aligned_cols=261 Identities=31% Similarity=0.553 Sum_probs=215.8
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.+.|.....||.|+||.||++.+..++..||||.+.... ....+.+.+|+.+++.+ +||||+++++.+...+..|+
T Consensus 21 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~~l 96 (292)
T cd06658 21 REYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDY-HHENVVDMYNSYLVGDELWV 96 (292)
T ss_pred HHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch---HHHHHHHHHHHHHHHhC-CCCcHHHHHHheecCCeEEE
Confidence 345666778999999999999999999999999986542 23456788999999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+.+. ...+++..++.++.||+.||.|||++||+||||||+||+++ .++
T Consensus 97 v~e~~~~~~L~~~~~------------------~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~---~~~ 155 (292)
T cd06658 97 VMEFLEGGALTDIVT------------------HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT---SDG 155 (292)
T ss_pred EEeCCCCCcHHHHHh------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc---CCC
Confidence 999999999977552 24588999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCC-CCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 255 SLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
.+||+|||++...... .......|++.|+|||.+.+ .++.++|||||||++|+|++|..||........+..+.....
T Consensus 156 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~ 235 (292)
T cd06658 156 RIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLP 235 (292)
T ss_pred CEEEccCcchhhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC
Confidence 8999999998754322 22234578999999998865 458899999999999999999999988776665555443222
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCCC
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~~ 381 (577)
.. ......++..+.+++.+||..||.+|||+.++++||||+.....+.
T Consensus 236 ~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~~ 283 (292)
T cd06658 236 PR-VKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPSC 283 (292)
T ss_pred Cc-cccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCccc
Confidence 11 1112346889999999999999999999999999999998766553
No 196
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.8e-41 Score=339.41 Aligned_cols=263 Identities=23% Similarity=0.317 Sum_probs=209.4
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|...+.||+|+||.||++.+..+|+.||||.+..... ......+.+|+.++.++.+||||+++++++..++..+++|
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD--EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC--hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence 46677889999999999999999999999999876532 2345678899999999966999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCCC
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||+. ++|.+..... .......+++..+..++.|++.||+|||+ .+|+||||||+||+++ .++.
T Consensus 83 e~~~-~~l~~l~~~~------------~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~---~~~~ 146 (288)
T cd06616 83 ELMD-ISLDKFYKYV------------YEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLD---RNGN 146 (288)
T ss_pred eccc-CCHHHHHHHH------------HHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEc---cCCc
Confidence 9985 4554433211 11234678999999999999999999997 4999999999999998 4678
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcccC----CCCCCchhhHHHHHHHHHhCCCCCCCCCh-hHHHHHHHhC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK----SGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRN 330 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~DiwSlG~il~el~tg~~Pf~~~~~-~~~~~~i~~~ 330 (577)
+||+|||++.............|++.|+|||++.+. ++.++|||||||++|+|++|+.||..... .+....+...
T Consensus 147 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~ 226 (288)
T cd06616 147 IKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKG 226 (288)
T ss_pred EEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCC
Confidence 999999999765543333445789999999988654 68899999999999999999999965542 1222233222
Q ss_pred C-CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 331 K-PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 331 ~-~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
. +......+..++.++.+||.+||..+|.+|||+.+++.||||+...
T Consensus 227 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~ 274 (288)
T cd06616 227 DPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYE 274 (288)
T ss_pred CCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchh
Confidence 2 2222222345789999999999999999999999999999998643
No 197
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.6e-41 Score=338.86 Aligned_cols=256 Identities=28% Similarity=0.470 Sum_probs=207.7
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++++.||.|+||.||+|++..+|+.||||.+..... .......+.+|+++++++ +||||+++++++.+.+..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~ 78 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLVF 78 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc-ccccchHHHHHHHHHHhc-CCCCCcchhhhcccCCcEEEEe
Confidence 38899999999999999999999999999998865432 122345688999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+. ++|.+++... ....+++..++.++.||+.||.|||+.+++||||+|+||+++ .++.+
T Consensus 79 e~~~-~~l~~~~~~~---------------~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~---~~~~~ 139 (284)
T cd07860 79 EFLH-QDLKKFMDAS---------------PLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAI 139 (284)
T ss_pred eccc-cCHHHHHHhC---------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCE
Confidence 9995 5787765322 345689999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCC-CccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 257 KATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 257 kl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
||+|||++....... ......+++.|+|||++.+. ++.++|||||||++|+|+||+.||.+.+.......+......
T Consensus 140 ~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~ 219 (284)
T cd07860 140 KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 219 (284)
T ss_pred EEeeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCC
Confidence 999999987654322 22344678899999987653 377899999999999999999999877655444433321110
Q ss_pred ------------------CCC-------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 334 ------------------FRR-------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 334 ------------------~~~-------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
++. ...+.+++++.++|.+||+.||.+|||+.++++||||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 220 PDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred CChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 000 0123477889999999999999999999999999998
No 198
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=4.4e-41 Score=337.59 Aligned_cols=262 Identities=26% Similarity=0.442 Sum_probs=211.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||.|+||.||+|.++.+|+.||+|.+...... ......+.+|+.+++++ +||||+++++++.....+|+|
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 79 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQED-EGVPSTAIREISLLKEM-QHGNIVRLQDVVHSEKRLYLV 79 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccc-ccchHHHHHHHHHHHhc-cCCCEeeEEEEEecCCeEEEE
Confidence 3699999999999999999999999999999988654321 22345678899999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++ ++|.+.+... ....+++..++.++.||+.||.|||+++++||||+|+||+++. .++.
T Consensus 80 ~e~~~-~~l~~~~~~~---------------~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~--~~~~ 141 (294)
T PLN00009 80 FEYLD-LDLKKHMDSS---------------PDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR--RTNA 141 (294)
T ss_pred Eeccc-ccHHHHHHhC---------------CCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC--CCCE
Confidence 99995 5777765322 2234678889999999999999999999999999999999984 3567
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+||+|||++...... .......+++.|+|||++.+ .++.++|||||||++|+|++|..||...+..+.+.++.....
T Consensus 142 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~ 221 (294)
T PLN00009 142 LKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILG 221 (294)
T ss_pred EEEcccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 999999999765322 22334578899999998765 357899999999999999999999987766555554432111
Q ss_pred CC---------------------CC----CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 333 DF---------------------RR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 333 ~~---------------------~~----~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.. .. ...+.+++++.++|.+||+.+|++||++.++++||||++.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~ 291 (294)
T PLN00009 222 TPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLG 291 (294)
T ss_pred CCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHh
Confidence 00 00 01245788999999999999999999999999999998754
No 199
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=8.7e-41 Score=330.19 Aligned_cols=255 Identities=27% Similarity=0.501 Sum_probs=207.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEeccccc--CchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--CCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM--ILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNY 171 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~ 171 (577)
.+|++.+.||+|+||.||+|.+..+|..||||.+..... ........+.+|+.+++++ .||||+++++++.+ ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~ 80 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL-LHERIVQYYGCLRDPMERT 80 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc-CCCCeeeEEeEeccCCCce
Confidence 368999999999999999999999999999998754321 1223456789999999999 59999999998876 357
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+|+|+||||+||+++
T Consensus 81 ~~~v~e~~~~~~L~~~l~~~-----------------~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~--- 140 (265)
T cd06652 81 LSIFMEHMPGGSIKDQLKSY-----------------GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRD--- 140 (265)
T ss_pred EEEEEEecCCCcHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEec---
Confidence 88999999999998876432 5578899999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCC----CCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
.++.++|+|||++...... .......|+..|+|||++.+ ..+.++|||||||++|+|++|+.||...........
T Consensus 141 ~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~ 220 (265)
T cd06652 141 SVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFK 220 (265)
T ss_pred CCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHH
Confidence 4788999999998765321 12234568999999998764 458899999999999999999999977655554444
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~ 374 (577)
+...... ....+.++..+.++|.+||. +|++||++.++++|||+.
T Consensus 221 ~~~~~~~--~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 221 IATQPTN--PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred HhcCCCC--CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 4332211 11224567889999999995 899999999999999984
No 200
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=8.7e-41 Score=329.71 Aligned_cols=254 Identities=33% Similarity=0.552 Sum_probs=211.5
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||+|+||.||+|.+..+++.||+|.+...... ......+.+|+.+++.+ +||||+++++.+...+.+++|+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELL-KHPNLVKYYGVEVHREKVYIFM 78 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhC-CCCChhheeeeEecCCEEEEEE
Confidence 589999999999999999999889999999998765432 34678899999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+.+.. ...+++..+..++.|++.||.|||+.||+|+||+|+||+++ .++.+
T Consensus 79 e~~~~~~L~~~~~~-----------------~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~---~~~~~ 138 (264)
T cd06626 79 EYCSGGTLEELLEH-----------------GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLD---HNGVI 138 (264)
T ss_pred ecCCCCcHHHHHhh-----------------cCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCE
Confidence 99999999887642 25578899999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCCC-----ccccccCCccccchhcccC----CCCCCchhhHHHHHHHHHhCCCCCCCCChh-HHHHH
Q 008127 257 KATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKRK----SGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKE 326 (577)
Q Consensus 257 kl~DFGla~~~~~~~~-----~~~~~gt~~y~aPE~~~~~----~~~~~DiwSlG~il~el~tg~~Pf~~~~~~-~~~~~ 326 (577)
||+|||++........ .....+++.|+|||++.+. .+.++||||||+++|+|++|..||...... .....
T Consensus 139 kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~ 218 (264)
T cd06626 139 KLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFH 218 (264)
T ss_pred EEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHH
Confidence 9999999877643322 2235788999999988643 478899999999999999999999765332 22222
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
+.. ......+.+..+++.+.++|.+||+.+|.+|||+.+++.|||+
T Consensus 219 ~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 219 VGA-GHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred Hhc-CCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 322 2222223334568899999999999999999999999999996
No 201
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.4e-41 Score=346.15 Aligned_cols=261 Identities=30% Similarity=0.490 Sum_probs=207.2
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 169 (577)
+.++|++.+.||+|+||.||+|.+..+|+.||||.+.... .......+.+|+.+++.+. ||||+++++++...
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 79 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE--HQTFCQRTLREIKILRRFK-HENIIGILDIIRPPSFES 79 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc--cchhHHHHHHHHHHHHhCC-CCCcCchhheeecccccc
Confidence 4468999999999999999999999999999999986422 1234566788999999995 99999999887643
Q ss_pred -CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 170 -NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 170 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
...|+|+||++ ++|.+.+ ....+++..++.++.||+.||.|||+.||+||||||+|||++
T Consensus 80 ~~~~~lv~e~~~-~~l~~~~------------------~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~ 140 (336)
T cd07849 80 FNDVYIVQELME-TDLYKLI------------------KTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 140 (336)
T ss_pred cceEEEEehhcc-cCHHHHH------------------hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC
Confidence 35899999996 4776544 235689999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCC----ccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDG 322 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~ 322 (577)
.++.+||+|||++........ .....||+.|+|||.+.+ .++.++|||||||++|+|++|+.||.+.....
T Consensus 141 ---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~ 217 (336)
T cd07849 141 ---TNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH 217 (336)
T ss_pred ---CCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 478899999999876543221 234578999999998643 46889999999999999999999997765433
Q ss_pred HHHHHHh-----------------------CCCCCCCC----CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 323 IFKEVLR-----------------------NKPDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 323 ~~~~i~~-----------------------~~~~~~~~----~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
....+.. ..+..... ..+.+++++.+||.+||+.+|.+|||+.++++||||+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~ 297 (336)
T cd07849 218 QLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQ 297 (336)
T ss_pred HHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccc
Confidence 3222211 00000000 12456788999999999999999999999999999998
Q ss_pred cCCC
Q 008127 376 GGDA 379 (577)
Q Consensus 376 ~~~~ 379 (577)
....
T Consensus 298 ~~~~ 301 (336)
T cd07849 298 YHDP 301 (336)
T ss_pred cCCC
Confidence 7643
No 202
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=6e-41 Score=333.80 Aligned_cols=250 Identities=24% Similarity=0.380 Sum_probs=199.9
Q ss_pred eecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHh--cCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL--AGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 103 ~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l--~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
.||+|+||.||+|.+..+++.||+|.+.+...........+..|..+++.+ .+||+|+.+++++...+.+|+||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999999999999999998765432222222334444433332 269999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
||+|.+++.. ...+++..++.++.|++.||.|||+.+|+||||||+||+++ .++.+||+|
T Consensus 81 g~~L~~~l~~-----------------~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~---~~~~~kl~d 140 (278)
T cd05606 81 GGDLHYHLSQ-----------------HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISD 140 (278)
T ss_pred CCcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEEC---CCCCEEEcc
Confidence 9999876532 35789999999999999999999999999999999999998 478899999
Q ss_pred cCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCC---hhHHHHHHHhCCCCCC
Q 008127 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKT---EDGIFKEVLRNKPDFR 335 (577)
Q Consensus 261 FGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~---~~~~~~~i~~~~~~~~ 335 (577)
||++...... .....+|+..|+|||++.+ .++.++||||+||++|+|++|+.||.+.. .......+.....
T Consensus 141 fg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--- 216 (278)
T cd05606 141 LGLACDFSKK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV--- 216 (278)
T ss_pred CcCccccCcc-CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCC---
Confidence 9998765432 2234579999999999864 36889999999999999999999997652 2222222222222
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCccccccC
Q 008127 336 RKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREGG 377 (577)
Q Consensus 336 ~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~~ 377 (577)
..+..+++.+.+++.+||..+|.+|| ++.++++||||+...
T Consensus 217 -~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 217 -ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD 262 (278)
T ss_pred -CCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence 22245689999999999999999999 999999999998754
No 203
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.9e-41 Score=340.14 Aligned_cols=256 Identities=29% Similarity=0.451 Sum_probs=208.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC--CeEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NYVY 173 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~~ 173 (577)
+.|++.+.||.|+||.||+|.+..+++.||+|.+...... ......+.+|+.+++++. ||||+++++++... +.+|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQ-HPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcC-CCCEEEEEEEEEecCCCcEE
Confidence 3689999999999999999999999999999998755432 223345678999999995 99999999998877 8999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+||||++ ++|.+.+... ...+++..++.++.||+.||.|||+.|++||||||+||+++ .+
T Consensus 83 lv~e~~~-~~L~~~~~~~----------------~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~---~~ 142 (293)
T cd07843 83 MVMEYVE-HDLKSLMETM----------------KQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLN---NR 142 (293)
T ss_pred EEehhcC-cCHHHHHHhc----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC---CC
Confidence 9999997 4887765432 24689999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCC-CCccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 254 SSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
+.+||+|||++...... .......+++.|+|||.+.+. .+.++|||||||++|+|++|..||........+..+...
T Consensus 143 ~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~ 222 (293)
T cd07843 143 GILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKL 222 (293)
T ss_pred CcEEEeecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 89999999999866543 233445688999999988653 478999999999999999999999887766555554331
Q ss_pred CCCC--------------------------CCCCCCC--CCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 331 KPDF--------------------------RRKPWPS--ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 331 ~~~~--------------------------~~~~~~~--~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.... ....++. +++.+.++|.+||+.+|++|||+.++|.||||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 223 LGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred hCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 1100 0011222 47889999999999999999999999999998
No 204
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=7.9e-41 Score=337.91 Aligned_cols=258 Identities=27% Similarity=0.455 Sum_probs=214.0
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
...+|.+.+.||.|+||.||+|.+..+|+.||+|.+.............+.+|+.+++.+ +||||+++++++...+..|
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~ 91 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQL-RHPNTIEYKGCYLREHTAW 91 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEEeCCeEE
Confidence 445799999999999999999999999999999998654433344556788999999999 5999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+||||++ |+|.+.+.. ....+++..+..++.||+.||.|||+.||+||||+|+||+++ .+
T Consensus 92 lv~e~~~-g~l~~~~~~----------------~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~---~~ 151 (307)
T cd06607 92 LVMEYCL-GSASDILEV----------------HKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLT---EP 151 (307)
T ss_pred EEHHhhC-CCHHHHHHH----------------cccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEC---CC
Confidence 9999996 567665432 135689999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccccchhcc----cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
+.+||+|||++...... ....|++.|+|||++. +.++.++||||||+++|+|++|..||.+.........+..
T Consensus 152 ~~~kL~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~ 228 (307)
T cd06607 152 GTVKLADFGSASLVSPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 228 (307)
T ss_pred CCEEEeecCcceecCCC---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhc
Confidence 88999999998765433 3457889999999874 3467899999999999999999999988776665554443
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.... ......++..+.++|.+||..+|.+||++.+++.||||....
T Consensus 229 ~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 229 NDSP--TLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred CCCC--CCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 3221 111234678899999999999999999999999999998754
No 205
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=5e-41 Score=336.64 Aligned_cols=255 Identities=27% Similarity=0.450 Sum_probs=202.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||.|+||.||+|.++.+++.||||.+...... .....+.+|+.+++.+ +||||+++++++...+..|+|
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE--GAPFTAIREASLLKDL-KHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc--CCchhHHHHHHHHhhC-CCcceeeEEEEEecCCeEEEE
Confidence 4799999999999999999999999999999998654321 1223467899999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++ +|.+.+... ...+++..++.++.||+.||.|||+++|+||||||+||+++ .++.
T Consensus 82 ~e~~~~-~L~~~~~~~----------------~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~---~~~~ 141 (291)
T cd07844 82 FEYLDT-DLKQYMDDC----------------GGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLIS---ERGE 141 (291)
T ss_pred EecCCC-CHHHHHHhC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEc---CCCC
Confidence 999974 888766432 24688999999999999999999999999999999999998 4778
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCC-hhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKT-EDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~-~~~~~~~i~~~~ 331 (577)
+||+|||++...... .......++..|+|||++.+ .++.++||||+||++|+|++|+.||.+.. ..+....+....
T Consensus 142 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~ 221 (291)
T cd07844 142 LKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVL 221 (291)
T ss_pred EEECccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhc
Confidence 999999998754321 12233457889999998764 35788999999999999999999997654 222222221100
Q ss_pred CC--------------CC------------CCCCCCCC--HHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 332 PD--------------FR------------RKPWPSIS--NSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 332 ~~--------------~~------------~~~~~~~s--~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.. +. ...++.++ ..+.++|.+||+.+|.+|||+.+++.||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 222 GTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred CCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 00 00 00112344 788999999999999999999999999998
No 206
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-43 Score=349.30 Aligned_cols=258 Identities=28% Similarity=0.478 Sum_probs=232.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+++++..||-|+||.|-++........+|+|++++.........+.+..|.+||...+ .|.||++|..|.+..++|++
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~-s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECR-SDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcC-chHHHHHHHHhccchhhhhh
Confidence 35778889999999999999866555569999999888877778899999999999995 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||-|-||+|+..|.. ++.|.+..++.++..+++|++|||++|||+|||||+|.+|+ .+|-
T Consensus 499 mEaClGGElWTiLrd-----------------Rg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd---~~Gy 558 (732)
T KOG0614|consen 499 MEACLGGELWTILRD-----------------RGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLD---NRGY 558 (732)
T ss_pred HHhhcCchhhhhhhh-----------------cCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeec---cCCc
Confidence 999999999987754 48899999999999999999999999999999999999998 5899
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+||.|||+|+.+..+....++||||.|.|||++.. ....++|.||||+++|||++|.+||.+.++...+..|+++.-.+
T Consensus 559 ~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i 638 (732)
T KOG0614|consen 559 LKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI 638 (732)
T ss_pred eEEeehhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh
Confidence 99999999999999999999999999999997654 45889999999999999999999999999999999999976443
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCcccccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 376 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~ 376 (577)
..+ ..++..+.+||+++...+|.+|.. +.+|.+|.||...
T Consensus 639 ~~P--r~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gf 683 (732)
T KOG0614|consen 639 EFP--RRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGF 683 (732)
T ss_pred hcc--cccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcC
Confidence 332 358889999999999999999995 8899999999763
No 207
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=7.9e-41 Score=328.47 Aligned_cols=250 Identities=28% Similarity=0.507 Sum_probs=211.9
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||++.+..+++.||+|.+..... ....+.+.+|+.+++.+ +||||+++++.+...+.+|+||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 77 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS--SSAVEDSRKEAVLLAKM-KHPNIVAFKESFEADGHLYIVM 77 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc--hHHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEEE
Confidence 48899999999999999999999999999999865432 23567788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++|+|.+.+... ....+++..++.++.||+.||.|||++||+|+||||+||+++ .++.+
T Consensus 78 e~~~~~~l~~~~~~~---------------~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~---~~~~~ 139 (255)
T cd08219 78 EYCDGGDLMQKIKLQ---------------RGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLT---QNGKV 139 (255)
T ss_pred eeCCCCcHHHHHHhc---------------cCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEC---CCCcE
Confidence 999999998876432 235688999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCC-CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+|+|||++....... ......|++.|+|||++.+. ++.++|+||||+++|+|++|..||...+.......+..+....
T Consensus 140 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 219 (255)
T cd08219 140 KLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKP 219 (255)
T ss_pred EEcccCcceeecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCC
Confidence 999999997654322 22346789999999998654 5889999999999999999999998877766666665543322
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
....++..+.+||.+||..||.+|||+.+++.-
T Consensus 220 ---~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 220 ---LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ---CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 124578899999999999999999999999864
No 208
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.4e-40 Score=328.09 Aligned_cols=256 Identities=28% Similarity=0.503 Sum_probs=215.5
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--CCeEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYVYI 174 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~~l 174 (577)
+|++.+.||.|+||.||+|.+..+|..||+|.+..... .....+.+..|+.+++.+ +||||+++++++.. ...+|+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~~ 78 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILREL-KHPNIVRYYDRIIDRSNQTLYI 78 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhc-CCCccceeeeeeecCCCCEEEE
Confidence 48899999999999999999999999999999865443 234567788999999999 49999999998753 457899
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH-----hcCceeccCCCCcEEeec
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH-----LHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH-----~~~iiHrDlKp~NILl~~ 249 (577)
+|||+++++|.+.+... ......+++..++.++.||+.||.||| +.+++|+||||+||+++
T Consensus 79 ~~e~~~~~~L~~~l~~~-------------~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~- 144 (265)
T cd08217 79 VMEYCEGGDLAQLIQKC-------------KKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLD- 144 (265)
T ss_pred EehhccCCCHHHHHHHH-------------hhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEe-
Confidence 99999999999887542 123467899999999999999999999 89999999999999998
Q ss_pred CCCCCCeeEEecCCCcccCCCCC-ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.++.+||+|||++........ .....|++.|+|||++.+. ++.++|+||||+++|+|++|..||...........+
T Consensus 145 --~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~ 222 (265)
T cd08217 145 --ANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKI 222 (265)
T ss_pred --cCCCEEEecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHH
Confidence 478999999999987754433 3456799999999988654 578899999999999999999999887766666666
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
...... .....++..+.+++.+||..+|.+|||+.++++|||+
T Consensus 223 ~~~~~~---~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 223 KEGKFR---RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred hcCCCC---CCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 554322 1224578899999999999999999999999999996
No 209
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.6e-41 Score=333.78 Aligned_cols=256 Identities=28% Similarity=0.446 Sum_probs=211.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||+|.++.+++.||+|.+..... ......+.+|+++++.+. ||||+++++.+...+.+++|+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKCN-SPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC--hHHHHHHHHHHHHHHHCC-CCchhhhheeeecCCEEEEEE
Confidence 57888999999999999999999999999999876532 245567889999999995 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCCC
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||+++++|.+.+... ...+++..+..++.|++.||.|||+ .|++|+||||+||+++ .++.
T Consensus 79 e~~~~~~L~~~~~~~----------------~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~---~~~~ 139 (265)
T cd06605 79 EYMDGGSLDKILKEV----------------QGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVN---SRGQ 139 (265)
T ss_pred EecCCCcHHHHHHHc----------------cCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEEC---CCCC
Confidence 999999998876432 2678899999999999999999999 9999999999999998 4778
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCC-----hhHHHHHHHh
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT-----EDGIFKEVLR 329 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~-----~~~~~~~i~~ 329 (577)
++|+|||.+........ ....++..|+|||.+.+. ++.++|||||||++|+|++|..||.... ..+....+..
T Consensus 140 ~~l~d~g~~~~~~~~~~-~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 218 (265)
T cd06605 140 IKLCDFGVSGQLVNSLA-KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVN 218 (265)
T ss_pred EEEeecccchhhHHHHh-hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhc
Confidence 99999999876543222 226789999999987654 5889999999999999999999996542 2233333333
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.... ......++.++.++|.+||..||.+|||+.+++.||||+.+.
T Consensus 219 ~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~~ 264 (265)
T cd06605 219 EPPP--RLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKYE 264 (265)
T ss_pred CCCC--CCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhccc
Confidence 3211 111112788999999999999999999999999999998753
No 210
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=7.1e-41 Score=331.06 Aligned_cols=249 Identities=19% Similarity=0.268 Sum_probs=205.8
Q ss_pred cceeeeeeecccCCeEEEEEEEc---CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.+|++.+.||+|+||.||+|.++ ..+..||+|.+.... .......+.+|+.++..+ +||||+++++++...+.+
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQF-DHSNIVRLEGVITRGNTM 81 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEecCCCc
Confidence 46999999999999999999865 456789999987542 223456788999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
++||||+++|+|.+++... ...+++..++.++.||+.||+|||++|++||||||+|||++ .
T Consensus 82 ~lv~e~~~~~~L~~~l~~~----------------~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~---~ 142 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKH----------------EGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVN---S 142 (266)
T ss_pred EEEEEeCCCCcHHHHHHhC----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEc---C
Confidence 9999999999998876432 35689999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCCCCcc--ccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQ--DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~--~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~ 328 (577)
++.+||+|||.+.......... ...++..|+|||++.+ .++.++|||||||++|+|++ |..||++.+..+....+.
T Consensus 143 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~ 222 (266)
T cd05064 143 DLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVE 222 (266)
T ss_pred CCcEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHH
Confidence 7899999999876543222111 2345678999998764 56889999999999999775 999999888877777665
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+.. .+..+.++..+.+++.+||..+|.+|||+.++++
T Consensus 223 ~~~~---~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 223 DGFR---LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred CCCC---CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 4422 1223567899999999999999999999999875
No 211
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=9.9e-41 Score=336.71 Aligned_cols=268 Identities=21% Similarity=0.251 Sum_probs=204.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcC----------------CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKA----------------NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~----------------~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpni 159 (577)
.+|++.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.++.++ +||||
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~ni 81 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRL-KDPNI 81 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhc-CCCCe
Confidence 579999999999999999997532 34579999886542 233456789999999999 59999
Q ss_pred eEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhh--HHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCcee
Q 008127 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSA--WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 237 (577)
Q Consensus 160 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiH 237 (577)
+++++++...+..++||||+++|+|.+++............ ..........++...++.++.||+.||.|||+.||+|
T Consensus 82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH 161 (304)
T cd05096 82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVH 161 (304)
T ss_pred eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 99999999999999999999999999987543211100000 0000112245788899999999999999999999999
Q ss_pred ccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh--C
Q 008127 238 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC--G 311 (577)
Q Consensus 238 rDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t--g 311 (577)
|||||+|||++ .++.+||+|||++........ .....++..|+|||++. +.++.++|||||||++|+|++ +
T Consensus 162 ~dlkp~Nill~---~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~ 238 (304)
T cd05096 162 RDLATRNCLVG---ENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCK 238 (304)
T ss_pred cCcchhheEEc---CCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccC
Confidence 99999999998 478899999999986543322 12345678899999875 456899999999999999986 6
Q ss_pred CCCCCCCChhHHHHHHHh---CC-CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 312 RRPFWDKTEDGIFKEVLR---NK-PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 312 ~~Pf~~~~~~~~~~~i~~---~~-~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
..||.+.+..+....+.. .. ........+.++..+.+|+.+||..||.+|||+.++.+
T Consensus 239 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 239 EQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred CCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 778877666655544322 11 11111123457889999999999999999999999843
No 212
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.1e-40 Score=327.68 Aligned_cols=254 Identities=31% Similarity=0.490 Sum_probs=212.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEeccccc--CchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM--ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
+|+..+.||.|+||.||+|.+..++..||+|.+..... ........+.+|+.+++.+ +||||+++++++.....+|+
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l 79 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL-QHPNIVQYLGTEREEDNLYI 79 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhc-CCCCchheeeeEecCCeEEE
Confidence 47788899999999999999988999999998865432 1233557789999999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|+||+++++|.+++.. ...+++..+..++.||+.||.|||+.||+|+||+|+||+++ .++
T Consensus 80 v~e~~~~~~L~~~~~~-----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~---~~~ 139 (258)
T cd06632 80 FLELVPGGSLAKLLKK-----------------YGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVD---TNG 139 (258)
T ss_pred EEEecCCCcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCC
Confidence 9999999999887642 25688999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhccc-C-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-K-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
.+||+|||++.............|++.|+|||.+.. . ++.++|+|||||++|+|++|..||...........+....
T Consensus 140 ~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~- 218 (258)
T cd06632 140 VVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSK- 218 (258)
T ss_pred CEEEccCccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcc-
Confidence 899999999887654443445678999999998754 3 6889999999999999999999997766544444443311
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
. .....+.+++.+.+++.+||..+|.+|||+.+++.|||+
T Consensus 219 ~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 219 E-LPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred c-CCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 1 112234578999999999999999999999999999996
No 213
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=6e-41 Score=345.50 Aligned_cols=259 Identities=28% Similarity=0.453 Sum_probs=206.7
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 169 (577)
+.++|++.+.||+|+||.||+|.+..+|+.||||.+.+... .......+.+|+.+++++ +||||++++++|...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 91 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ-NVTHAKRAYRELVLMKLV-NHKNIIGLLNVFTPQKSLE 91 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc-ChhHHHHHHHHHHHHHhc-CCCCCcceeeeeccCCCcc
Confidence 44689999999999999999999999999999999864322 223455678899999999 599999999988643
Q ss_pred --CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 170 --NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
..+|+||||+. ++|.+.+. ..+++..+..++.||+.||.|||++||+||||||+||++
T Consensus 92 ~~~~~~lv~e~~~-~~l~~~~~-------------------~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~ 151 (353)
T cd07850 92 EFQDVYLVMELMD-ANLCQVIQ-------------------MDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 151 (353)
T ss_pred ccCcEEEEEeccC-CCHHHHHh-------------------hcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE
Confidence 35799999995 57766542 227888999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
+ .++.+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|+.||...+....+..
T Consensus 152 ~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~ 228 (353)
T cd07850 152 K---SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNK 228 (353)
T ss_pred C---CCCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 8 478899999999987654444445678999999998765 458899999999999999999999987665444433
Q ss_pred HHhC----------------------CCCCCCCC-----------------CCCCCHHHHHHHHHccccCcCCCCCHHHH
Q 008127 327 VLRN----------------------KPDFRRKP-----------------WPSISNSAKDFVKKLLVKDPRARLTAAQA 367 (577)
Q Consensus 327 i~~~----------------------~~~~~~~~-----------------~~~~s~~~~~li~~~l~~dP~~Rpt~~~i 367 (577)
+... .+...... ....+..+.+||.+||+.||++|||+.++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ei 308 (353)
T cd07850 229 IIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDA 308 (353)
T ss_pred HHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHH
Confidence 3221 01000000 11235678999999999999999999999
Q ss_pred hcCccccccC
Q 008127 368 LSHPWVREGG 377 (577)
Q Consensus 368 l~hp~f~~~~ 377 (577)
|.||||+.-.
T Consensus 309 L~~~~~~~~~ 318 (353)
T cd07850 309 LQHPYINVWY 318 (353)
T ss_pred hcChhHhhcc
Confidence 9999997533
No 214
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=4.7e-41 Score=344.05 Aligned_cols=262 Identities=31% Similarity=0.459 Sum_probs=209.3
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 169 (577)
+.++|.+.+.||.|+||.||+|++..+|+.||||.+..... .......+.+|+.+++.+ +||||+++++++...
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~ni~~~~~~~~~~~~~~ 80 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD-NRIDAKRTLREIKLLRHL-DHENVIAIKDIMPPPHREA 80 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc-ccchhHHHHHHHHHHHhc-CCCCccchHHheecccccc
Confidence 34689999999999999999999999999999999865322 222345677899999999 599999999987643
Q ss_pred -CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 170 -NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 170 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
..+|+|+||+. ++|.+.+. ....+++..+..++.||+.||.|||+++++||||||+||+++
T Consensus 81 ~~~~~lv~e~~~-~~L~~~~~-----------------~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~ 142 (337)
T cd07858 81 FNDVYIVYELMD-TDLHQIIR-----------------SSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLN 142 (337)
T ss_pred cCcEEEEEeCCC-CCHHHHHh-----------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc
Confidence 35899999995 67776553 236799999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
.++.+||+|||++...... .......+|..|+|||.+.+ .++.++|||||||++|+|++|+.||.+.+......
T Consensus 143 ---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~ 219 (337)
T cd07858 143 ---ANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLK 219 (337)
T ss_pred ---CCCCEEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHH
Confidence 4788999999999876443 22345578999999998753 46889999999999999999999997655433222
Q ss_pred HHHh-----------------------CCCCCC----CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 326 EVLR-----------------------NKPDFR----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 326 ~i~~-----------------------~~~~~~----~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.+.. ..+... ...++.+++.+.+||.+||+.+|++|||+.++++||||.....
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~ 299 (337)
T cd07858 220 LITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHD 299 (337)
T ss_pred HHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcC
Confidence 2211 000000 0123568899999999999999999999999999999986543
No 215
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=9.5e-41 Score=337.61 Aligned_cols=256 Identities=29% Similarity=0.440 Sum_probs=201.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC-----
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN----- 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~----- 170 (577)
++|++.+.||+|+||.||+|.+..+++.||||.+...... ......+.+|+.+++++ .||||+++++++...+
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEK-EGFPITALREIKILQLL-KHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCc-CCchhHHHHHHHHHHhC-CCCCccceEEEEecccccccC
Confidence 3699999999999999999999999999999988643321 12234467899999999 5999999999887543
Q ss_pred ---eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 171 ---YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 171 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
..++||||+. ++|.+.+.. ....+++..++.++.||+.||.|||++|++|+||||+||++
T Consensus 90 ~~~~~~lv~e~~~-~~l~~~l~~----------------~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~ 152 (310)
T cd07865 90 YKGSFYLVFEFCE-HDLAGLLSN----------------KNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILI 152 (310)
T ss_pred CCceEEEEEcCCC-cCHHHHHHh----------------cccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE
Confidence 4699999996 477665532 23468999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCC-----CccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCCh
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTE 320 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~ 320 (577)
+ .++.+||+|||++....... ......++..|+|||++.+. ++.++||||||+++|+|++|..||.+...
T Consensus 153 ~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~ 229 (310)
T cd07865 153 T---KDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTE 229 (310)
T ss_pred C---CCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCH
Confidence 8 47899999999997653322 12345678899999987653 47899999999999999999999987765
Q ss_pred hHHHHHHHhCCCCCCCCCC----------------------------CCCCHHHHHHHHHccccCcCCCCCHHHHhcCcc
Q 008127 321 DGIFKEVLRNKPDFRRKPW----------------------------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~~~~----------------------------~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~ 372 (577)
......+..-...++...+ ...+..+.+||.+||..||.+|||+.++|+|||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~ 309 (310)
T cd07865 230 QHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDF 309 (310)
T ss_pred HHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCC
Confidence 5444333221111110000 012467889999999999999999999999999
Q ss_pred c
Q 008127 373 V 373 (577)
Q Consensus 373 f 373 (577)
|
T Consensus 310 f 310 (310)
T cd07865 310 F 310 (310)
T ss_pred C
Confidence 8
No 216
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.5e-40 Score=330.81 Aligned_cols=255 Identities=27% Similarity=0.468 Sum_probs=213.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
+-|++.+.||.|+||.||+|.+..++..||||.+..... ......+.+|+.++.++ +||||+++++++..++.+|+|
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 80 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWII 80 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHHHhc-CCCCEeEEEEEEEeCCeEEEE
Confidence 358889999999999999999989999999998865432 23456788999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++++|.+++. ...+++..+..++.|++.|+.|||+.|++|+||||+||+++ .++.
T Consensus 81 ~e~~~~~~l~~~i~------------------~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~---~~~~ 139 (277)
T cd06641 81 MEYLGGGSALDLLE------------------PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGE 139 (277)
T ss_pred EEeCCCCcHHHHHh------------------cCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEEC---CCCC
Confidence 99999999987652 24578999999999999999999999999999999999998 4678
Q ss_pred eeEEecCCCcccCCCC-CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
++|+|||++....... ......|+..|+|||.+.+ ..+.++|+|||||++|+|++|..||...........+......
T Consensus 140 ~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 219 (277)
T cd06641 140 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPP 219 (277)
T ss_pred EEEeecccceecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCC
Confidence 9999999987654322 1234568899999998765 4578899999999999999999999876665555554333221
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.....++.++.+++.+||..+|.+||++.++++||||....
T Consensus 220 ---~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~ 260 (277)
T cd06641 220 ---TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFA 260 (277)
T ss_pred ---CCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhh
Confidence 12235788999999999999999999999999999999753
No 217
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=5e-41 Score=340.67 Aligned_cols=263 Identities=29% Similarity=0.468 Sum_probs=204.3
Q ss_pred ceeeeeeecccCCeEEEEEEEcC--CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC--CeE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKA--NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NYV 172 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~--~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~ 172 (577)
+|++.+.||+|+||.||+|.+.. +++.||+|.+.............+.+|+.+++.+ +||||+++++++.+. ..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 79 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLREL-KHENVVSLVEVFLEHADKSV 79 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhc-CCCCccceEEEEeCCCCceE
Confidence 48899999999999999999988 8999999998764322222345678899999999 599999999999987 889
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec-CC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS-AK 251 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~-~~ 251 (577)
|+||||+++ +|.+.+.... ......+++..++.++.||+.||.|||+.+|+||||||+||+++. ..
T Consensus 80 ~lv~e~~~~-~l~~~~~~~~------------~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~ 146 (316)
T cd07842 80 YLLFDYAEH-DLWQIIKFHR------------QAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGP 146 (316)
T ss_pred EEEEeCCCc-CHHHHHHhhc------------cCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCC
Confidence 999999964 6766554321 112247899999999999999999999999999999999999983 12
Q ss_pred CCCCeeEEecCCCcccCCCCC----ccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhH---
Q 008127 252 EDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDG--- 322 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~--- 322 (577)
.++.+||+|||++........ ....++|+.|+|||++.+ .++.++|||||||++|+|++|++||.+.....
T Consensus 147 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~ 226 (316)
T cd07842 147 ERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKS 226 (316)
T ss_pred ccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCccccccc
Confidence 278899999999986543221 234578999999998764 35889999999999999999999997654322
Q ss_pred ------HHHHHHhC--------------CCC-------CCCCCCC------------CCCHHHHHHHHHccccCcCCCCC
Q 008127 323 ------IFKEVLRN--------------KPD-------FRRKPWP------------SISNSAKDFVKKLLVKDPRARLT 363 (577)
Q Consensus 323 ------~~~~i~~~--------------~~~-------~~~~~~~------------~~s~~~~~li~~~l~~dP~~Rpt 363 (577)
.+..+... .+. .....++ ..+..+.++|.+||..||++|||
T Consensus 227 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps 306 (316)
T cd07842 227 NPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRIT 306 (316)
T ss_pred chhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcC
Confidence 11111110 000 0001111 46678999999999999999999
Q ss_pred HHHHhcCccc
Q 008127 364 AAQALSHPWV 373 (577)
Q Consensus 364 ~~~il~hp~f 373 (577)
+.++++||||
T Consensus 307 ~~eil~~~~f 316 (316)
T cd07842 307 AEEALEHPYF 316 (316)
T ss_pred HHHHhcCCCC
Confidence 9999999998
No 218
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2.1e-41 Score=336.87 Aligned_cols=255 Identities=27% Similarity=0.458 Sum_probs=212.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
+.|.+.+.||.|+||.||+|.+..++..||+|.+..... ....+.+.+|+.+++++ +||||+++++++..++.+|+|
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQC-DSPYITRYYGSYLKGTKLWII 80 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc--hHHHHHHHHHHHHHHcC-CCCccHhhhcccccCCceEEE
Confidence 457888999999999999999999999999998865432 23456789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++++|.+.+. ...+++..++.++.||+.||.|||++|++|+||+|+||+++ .++.
T Consensus 81 ~e~~~~~~L~~~~~------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~---~~~~ 139 (277)
T cd06642 81 MEYLGGGSALDLLK------------------PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS---EQGD 139 (277)
T ss_pred EEccCCCcHHHHhh------------------cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEe---CCCC
Confidence 99999999987652 24678999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCCC-ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
++|+|||++........ .....|+..|+|||.+.+. ++.++|||||||++|+|++|..||...........+.....
T Consensus 140 ~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~- 218 (277)
T cd06642 140 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP- 218 (277)
T ss_pred EEEccccccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCC-
Confidence 99999999976543321 2234688999999988654 57899999999999999999999976655554443332221
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
......++..+.++|.+||..+|.+|||+.++++||||+...
T Consensus 219 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06642 219 --PTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYT 260 (277)
T ss_pred --CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHh
Confidence 111234678899999999999999999999999999998653
No 219
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.6e-42 Score=360.24 Aligned_cols=261 Identities=21% Similarity=0.342 Sum_probs=218.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
.+.+..+.||+|+||+||+|.... .-..||||.++... ......+|++|++++..| +|||||+|+|+|..++
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l-~H~nIVrLlGVC~~~~ 562 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAEL-QHPNIVRLLGVCREGD 562 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhc-cCCCeEEEEEEEccCC
Confidence 356778899999999999997532 33579999987654 345788999999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+|+|+|||..|||.++|............-.. ...+|+..+.+.|+.||+.|++||-++.+|||||-..|+|++
T Consensus 563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~---~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVg-- 637 (774)
T KOG1026|consen 563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQD---TPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVG-- 637 (774)
T ss_pred eeEEEEEecccccHHHHHHhhCCccccccCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceec--
Confidence 999999999999999999765332221100000 035599999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCCcc---ccccCCccccchh-cccCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~~~---~~~gt~~y~aPE~-~~~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
++..|||+|||+++.+-..+.+. ...-..+|||||. +.++++++|||||+||+|||+++ |+.||.+.+.++++.
T Consensus 638 -e~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe 716 (774)
T KOG1026|consen 638 -ENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIE 716 (774)
T ss_pred -cceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHH
Confidence 68999999999999775444332 2234568999995 57899999999999999999998 999999999999999
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHh
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il 368 (577)
.|..+.. ... ..++|.++.+||..||+.+|++||++++|-
T Consensus 717 ~i~~g~l-L~~--Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 717 CIRAGQL-LSC--PENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred HHHcCCc-ccC--CCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 9988765 332 367899999999999999999999999873
No 220
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.5e-40 Score=345.86 Aligned_cols=268 Identities=22% Similarity=0.280 Sum_probs=208.3
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCC-----CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKAN-----GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~-----~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
.++|++++.||+|+||.||+|.+... +..||||++.... .....+.+.+|+.++.++..||||+++++++...
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~ 113 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS 113 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 35799999999999999999987533 3469999986542 2334567899999999995699999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhh-----------------------------------------------------
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTT----------------------------------------------------- 196 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~----------------------------------------------------- 196 (577)
+.+|||||||++|+|.+++........
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 999999999999999998876421100
Q ss_pred --------------------------hhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 197 --------------------------LTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 197 --------------------------~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
..............+++..++.++.||+.||.|||+.+|+||||||+|||++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~-- 271 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLA-- 271 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEe--
Confidence 0000011111234688999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
.++.+||+|||+++....... .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||..........
T Consensus 272 -~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~ 350 (400)
T cd05105 272 -QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFY 350 (400)
T ss_pred -CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHH
Confidence 477899999999976543221 223457788999998764 46889999999999999997 999998766554444
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
..+...... .....++..+.+++.+||..||++|||+.++.+
T Consensus 351 ~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 351 NKIKSGYRM--AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred HHHhcCCCC--CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 443333222 222467889999999999999999999988865
No 221
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=6.3e-41 Score=343.73 Aligned_cols=261 Identities=31% Similarity=0.489 Sum_probs=209.2
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 169 (577)
+..+|.+.+.||.|+||.||+|.+..+|+.||+|.+..... ...+.+.+|+++++.+ +||||+++++++...
T Consensus 3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~ 78 (342)
T cd07854 3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRL-DHDNIVKVYEVLGPSGSDL 78 (342)
T ss_pred cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhc-CCCcchhhHhhhccccccc
Confidence 34689999999999999999999999999999999865542 3456788999999999 599999999876543
Q ss_pred ----------CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceecc
Q 008127 170 ----------NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 239 (577)
Q Consensus 170 ----------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrD 239 (577)
..+|+||||++ ++|.+.+. ...+++..++.++.||+.||.|||+.||+|||
T Consensus 79 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givH~d 139 (342)
T cd07854 79 TEDVGSLTELNSVYIVQEYME-TDLANVLE------------------QGPLSEEHARLFMYQLLRGLKYIHSANVLHRD 139 (342)
T ss_pred ccccccccccceEEEEeeccc-ccHHHHHH------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 35899999996 57766442 24688999999999999999999999999999
Q ss_pred CCCCcEEeecCCCCCCeeEEecCCCcccCCCCC----ccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCC
Q 008127 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRR 313 (577)
Q Consensus 240 lKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~ 313 (577)
|||+||+++. .+..+||+|||++........ .....|+..|+|||++.+ .++.++|||||||++|+|++|+.
T Consensus 140 ikp~Nili~~--~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~ 217 (342)
T cd07854 140 LKPANVFINT--EDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKP 217 (342)
T ss_pred CCHHHEEEcC--CCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCC
Confidence 9999999974 456799999999976532211 123468899999997643 35789999999999999999999
Q ss_pred CCCCCChhHHHHHHHhCCCCC----------------------CC----CCCCCCCHHHHHHHHHccccCcCCCCCHHHH
Q 008127 314 PFWDKTEDGIFKEVLRNKPDF----------------------RR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQA 367 (577)
Q Consensus 314 Pf~~~~~~~~~~~i~~~~~~~----------------------~~----~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~i 367 (577)
||.+....+....++...+.. .. ...+.++.++.+||.+||..||.+|||+.++
T Consensus 218 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~el 297 (342)
T cd07854 218 LFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEA 297 (342)
T ss_pred CCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHH
Confidence 998776655555443321100 00 0123577889999999999999999999999
Q ss_pred hcCccccccCCC
Q 008127 368 LSHPWVREGGDA 379 (577)
Q Consensus 368 l~hp~f~~~~~~ 379 (577)
+.||||+.....
T Consensus 298 l~h~~~~~~~~~ 309 (342)
T cd07854 298 LMHPYMSCYSCP 309 (342)
T ss_pred hCCCccccccCC
Confidence 999999865443
No 222
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=6.5e-41 Score=335.11 Aligned_cols=255 Identities=32% Similarity=0.522 Sum_probs=207.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||+|+||.||+|.+..+++.||||.+..... .......+.+|+++++++. ||||+++++++...+.+++||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQLR-HENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhcC-CCCeeehhheEEECCEEEEEE
Confidence 69999999999999999999999999999998865432 2234577899999999995 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++++.+.... . +...+++..+..++.||+.||.|||..+++||||+|+||+++ .++.+
T Consensus 80 e~~~~~~l~~~~-~----------------~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~---~~~~~ 139 (288)
T cd07833 80 EYVERTLLELLE-A----------------SPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVS---ESGVL 139 (288)
T ss_pred ecCCCCHHHHHH-h----------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCE
Confidence 999876554322 1 235689999999999999999999999999999999999998 47899
Q ss_pred eEEecCCCcccCCCC--CccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC-
Q 008127 257 KATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK- 331 (577)
Q Consensus 257 kl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~- 331 (577)
||+|||++....... ......++..|+|||++.+. ++.++||||||+++|+|++|+.||.+....+.+..+....
T Consensus 140 kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~ 219 (288)
T cd07833 140 KLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLG 219 (288)
T ss_pred EEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 999999998765443 33456789999999987654 4789999999999999999999998765544333322100
Q ss_pred -------------CCCC-----CC--------CC-CCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 332 -------------PDFR-----RK--------PW-PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 332 -------------~~~~-----~~--------~~-~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
..+. .. .+ ..++.++.+||++||..+|.+|||+.++++||||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 220 PLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred CCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 0000 00 01 1247889999999999999999999999999998
No 223
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.5e-40 Score=328.81 Aligned_cols=255 Identities=26% Similarity=0.455 Sum_probs=209.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|++.+.||.|+||.||+|++..+++.||||.+.............+.+|+.+++.+ +||||+++++++...+.+++|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL-NHPNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhC-CCcceeeeeeeEEECCeEEEE
Confidence 4699999999999999999999999999999988664444445567789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
+||+++|+|.+.+... ......+++..+..++.||+.||.|||+++++|+||||+||+++ .++.
T Consensus 81 ~e~~~~~~L~~~~~~~-------------~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~---~~~~ 144 (267)
T cd08228 81 LELADAGDLSQMIKYF-------------KKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFIT---ATGV 144 (267)
T ss_pred EEecCCCcHHHHHHHh-------------hhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEc---CCCC
Confidence 9999999998876432 11235688999999999999999999999999999999999998 4778
Q ss_pred eeEEecCCCcccCCCCC-ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCCh--hHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~--~~~~~~i~~~~ 331 (577)
++|+|||++........ .....|++.|+|||.+.+ ..+.++||||||+++|+|++|..||..... ......+...
T Consensus 145 ~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~- 223 (267)
T cd08228 145 VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQC- 223 (267)
T ss_pred EEECccccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcC-
Confidence 99999999887643222 234578899999998764 458899999999999999999999965432 2333333221
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.++......++..+.++|.+||..+|.+|||+.++++
T Consensus 224 -~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 224 -DYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred -CCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 2222223357788999999999999999999999986
No 224
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.1e-40 Score=330.24 Aligned_cols=261 Identities=29% Similarity=0.430 Sum_probs=209.4
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--CCeEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYVYI 174 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~~l 174 (577)
+|+..+.||.|++|.||+|.+..+++.||+|.+..... ......+.+|+++++++ +||||++++++|.. .+.+|+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN--PDLQKQILRELEINKSC-KSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc--hHHHHHHHHHHHHHHhC-CCCCeeeeeeEEEccCCCeEEE
Confidence 68999999999999999999999999999999875432 23457789999999999 59999999998864 447899
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+.+... ......+++..+..++.||+.||.|||+.|++|+||+|+||+++ .++
T Consensus 79 v~e~~~~~~L~~~l~~~-------------~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~---~~~ 142 (287)
T cd06621 79 AMEYCEGGSLDSIYKKV-------------KKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLT---RKG 142 (287)
T ss_pred EEEecCCCCHHHHHHHH-------------HhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEe---cCC
Confidence 99999999998876432 12346689999999999999999999999999999999999998 467
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCC-----hhHHHHHHH
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT-----EDGIFKEVL 328 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~-----~~~~~~~i~ 328 (577)
.++|+|||++....... .....++..|+|||.+.+ .++.++|||||||++|+|++|..||.... ..+....+.
T Consensus 143 ~~~l~dfg~~~~~~~~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 221 (287)
T cd06621 143 QVKLCDFGVSGELVNSL-AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIV 221 (287)
T ss_pred eEEEeeccccccccccc-cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHh
Confidence 89999999987654322 234568889999998764 46889999999999999999999997652 233333333
Q ss_pred hCCCC-CCCCCC--CCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 329 RNKPD-FRRKPW--PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 329 ~~~~~-~~~~~~--~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
..... ...... ...++.+.+||.+||..+|.+|||+.+++.||||+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~ 273 (287)
T cd06621 222 NMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQM 273 (287)
T ss_pred cCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccccc
Confidence 32211 111111 12467899999999999999999999999999997654
No 225
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.2e-40 Score=365.33 Aligned_cols=264 Identities=28% Similarity=0.388 Sum_probs=207.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.++||+|+||.||+|++..+|+.||||++.......+.....+.+|+.+++.+ +||||+++++++.+.+..|+|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L-~HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADL-IHPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhC-CCcCcCeEEEEEeeCCEEEEE
Confidence 4799999999999999999999999999999998764433344567799999999999 499999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++||+|.+.+.......... ......++...+..++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~------e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd---~dg~ 151 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLS------KELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLG---LFGE 151 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccc------hhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEc---CCCC
Confidence 99999999998875421110000 01124467778899999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCC-------------------CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCC
Q 008127 256 LKATDFGLSDFIKPG-------------------KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPF 315 (577)
Q Consensus 256 vkl~DFGla~~~~~~-------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf 315 (577)
+||+|||++...... ......+||+.|+|||++.+. ++.++|||||||++|+|+||..||
T Consensus 152 vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF 231 (932)
T PRK13184 152 VVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPY 231 (932)
T ss_pred EEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCC
Confidence 999999999765211 011235799999999988654 588999999999999999999999
Q ss_pred CCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 316 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 316 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
................+. ...++..+++.+.+++.+||..||++||+..+.+.+
T Consensus 232 ~~~~~~ki~~~~~i~~P~-~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~ 285 (932)
T PRK13184 232 RRKKGRKISYRDVILSPI-EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQ 285 (932)
T ss_pred CCcchhhhhhhhhccChh-hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 775544332221111111 112235688999999999999999999987766654
No 226
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1e-40 Score=333.08 Aligned_cols=256 Identities=25% Similarity=0.481 Sum_probs=208.8
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|++|.||+|++..+|..||||++..... ......+.+|+.+++.+ +||||+++++++...+..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 77 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKEL-KHENIVRLHDVIHTENKLMLVF 77 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhh-cCCCEeeeeeeEeeCCcEEEEE
Confidence 48999999999999999999999999999999875432 22345677899999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++ +|.+++... .....+++..+..++.||+.||.|||+.|++||||||+||+++ .++.+
T Consensus 78 e~~~~-~l~~~~~~~--------------~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~---~~~~~ 139 (284)
T cd07836 78 EYMDK-DLKKYMDTH--------------GVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLIN---KRGEL 139 (284)
T ss_pred ecCCc-cHHHHHHhc--------------CCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC---CCCcE
Confidence 99975 787766432 1124689999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCC-CCccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC-
Q 008127 257 KATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP- 332 (577)
Q Consensus 257 kl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~- 332 (577)
+|+|||++...... .......+|+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..+.+..+.....
T Consensus 140 ~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~ 219 (284)
T cd07836 140 KLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGT 219 (284)
T ss_pred EEeecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCC
Confidence 99999999765332 222345678999999987553 47889999999999999999999988776665555433210
Q ss_pred -------------CCCCC-----------CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 333 -------------DFRRK-----------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 333 -------------~~~~~-----------~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.+... ..+.++..+.++|.+||+.||.+||++.++++||||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 220 PTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred CChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 00000 013457789999999999999999999999999998
No 227
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.4e-40 Score=330.87 Aligned_cols=256 Identities=28% Similarity=0.506 Sum_probs=211.9
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc--CCCCeeEEEEEEEcCCeEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~~~~~~l 174 (577)
.|++.+.||.|+||.||+|.+..+++.||+|.+..... ......+.+|+.+++.+. .|||++++++++.....+|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP--DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC--chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 47888999999999999999999999999999865422 234567889999999985 49999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+++. ...+++..++.++.|++.||.|||+.||+|+||+|+||+++ .++
T Consensus 80 v~e~~~~~~L~~~~~------------------~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~---~~~ 138 (277)
T cd06917 80 IMEYAEGGSVRTLMK------------------AGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVT---NTG 138 (277)
T ss_pred EEecCCCCcHHHHHH------------------ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEc---CCC
Confidence 999999999987652 24688999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCC-CccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 255 SLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
.++|+|||++....... ......|+..|+|||.+.+ .++.++|+|||||++|+|++|..||.+.........+....
T Consensus 139 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~ 218 (277)
T cd06917 139 NVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSK 218 (277)
T ss_pred CEEEccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCC
Confidence 89999999998765432 2234579999999998764 24789999999999999999999997765544443332221
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.+......++.++.+++.+||..||.+||++.+++.||||++..
T Consensus 219 --~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 219 --PPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred --CCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 11111223778999999999999999999999999999998754
No 228
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.2e-40 Score=327.35 Aligned_cols=255 Identities=27% Similarity=0.519 Sum_probs=213.8
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|.+.+.||.|+||.||+|.++.+|..||+|.+...... ....+.+.+|+.+++.+ +||||+++++.+...+.+|+|+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~ 78 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMP-VKEKEASKKEVILLAKM-KHPNIVTFFASFQENGRLFIVM 78 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhcc-chhhHHHHHHHHHHHhC-CCCChhhhhheeccCCeEEEEE
Confidence 488999999999999999999999999999998664321 23456788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+++... ....+++..+..++.|++.||.|||+.+++|+||||+||+++. .+..+
T Consensus 79 e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~--~~~~~ 141 (257)
T cd08225 79 EYCDGGDLMKRINRQ---------------RGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSK--NGMVA 141 (257)
T ss_pred ecCCCCcHHHHHHhc---------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcC--CCCeE
Confidence 999999999877532 2345789999999999999999999999999999999999984 33467
Q ss_pred eEEecCCCcccCCCCC-ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
||+|||.+........ .....|++.|+|||++.+ .++.++|+|||||++|+|++|..||...+.......+......
T Consensus 142 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~- 220 (257)
T cd08225 142 KLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFA- 220 (257)
T ss_pred EecccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCC-
Confidence 9999999987654332 223468999999998764 4688999999999999999999999877766666655544322
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
...+.++..+.++|.+||..+|++|||+.+++.||||
T Consensus 221 --~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 221 --PISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred --CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 1224578899999999999999999999999999997
No 229
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.9e-40 Score=332.51 Aligned_cols=255 Identities=25% Similarity=0.407 Sum_probs=201.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
..|.+.+.||+|+||.||+|.+..+|..||+|.+..... ......+.+|+.+++.+ +||||+++++++..++..|+|
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGL-KHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhc-CCCCEeEEEEEEecCCeEEEE
Confidence 579999999999999999999999999999999865432 12234567899999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+. ++|.+.+... ...+++..+..++.||+.||.|||+.||+||||||+|||++ .++.
T Consensus 82 ~e~~~-~~l~~~~~~~----------------~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~---~~~~ 141 (291)
T cd07870 82 FEYMH-TDLAQYMIQH----------------PGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLIS---YLGE 141 (291)
T ss_pred Eeccc-CCHHHHHHhC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEc---CCCc
Confidence 99995 6777655322 24578888999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChh-HHHHHHHhC-
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRN- 330 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~-~~~~~i~~~- 330 (577)
+||+|||++...... .......+++.|+|||++.+ .++.++|||||||++|+|++|..||.+.... +.+..+...
T Consensus 142 ~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~ 221 (291)
T cd07870 142 LKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVL 221 (291)
T ss_pred EEEeccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHc
Confidence 999999998764322 22344568999999998865 3578899999999999999999999765432 222222110
Q ss_pred -------------CCCCCCC------------CCC--CCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 331 -------------KPDFRRK------------PWP--SISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 331 -------------~~~~~~~------------~~~--~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.+.+... .|. ..+..+.+++.+||..||.+|||+.+++.||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 222 GVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred CCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 0000000 011 125688999999999999999999999999998
No 230
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.2e-40 Score=332.65 Aligned_cols=257 Identities=25% Similarity=0.370 Sum_probs=211.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|.+..+|+.||+|++.... .+.....+.+|+++++.+ +||||+++++++...+.+|+|
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHEC-RSPYIVSFYGAFLNENNICMC 81 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHc-CCCCcceEeeeEecCCEEEEE
Confidence 46899999999999999999999999999999876542 233467789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||+++++|.+.+.. .+.+++..+..++.+++.||.|||+ .+++||||||+||+++ .++
T Consensus 82 ~e~~~~~~L~~~~~~-----------------~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~---~~~ 141 (284)
T cd06620 82 MEFMDCGSLDRIYKK-----------------GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVN---SRG 141 (284)
T ss_pred EecCCCCCHHHHHHh-----------------ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEEC---CCC
Confidence 999999999876532 2568999999999999999999997 6999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHhCCCCCCCCChh-----------H
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTED-----------G 322 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~-----------~ 322 (577)
.++|+|||++...... .....+||..|+|||++. +.++.++|||||||++|+|++|..||...... +
T Consensus 142 ~~~l~d~gl~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~ 220 (284)
T cd06620 142 QIKLCDFGVSGELINS-IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILD 220 (284)
T ss_pred cEEEccCCcccchhhh-ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHH
Confidence 8999999998754322 223457999999999875 45688999999999999999999999765432 2
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 323 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 323 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
....+..... +......++..+.+|+.+||..||.+|||+.++++||||.....
T Consensus 221 ~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~~ 274 (284)
T cd06620 221 LLQQIVQEPP--PRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQALR 274 (284)
T ss_pred HHHHHhhccC--CCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence 2333333221 11112237789999999999999999999999999999977544
No 231
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=2.1e-40 Score=326.82 Aligned_cols=254 Identities=28% Similarity=0.466 Sum_probs=215.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|++|.||+|.+..+++.||||++..... +.....+.+|+.++.++. ||||+++++++...+.+++||
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~--~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD--EEFRKQLLRELKTLRSCE-SPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc--hHHHHHHHHHHHHHHhcC-CCCeeeEEEEEccCCeEEEEE
Confidence 58899999999999999999999999999999876542 135677999999999995 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCCC
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||+++++|.+++... ..+++..++.++.||+.||.|||+ .+++||||+|+||+++ .++.
T Consensus 79 e~~~~~~L~~~l~~~-----------------~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~---~~~~ 138 (264)
T cd06623 79 EYMDGGSLADLLKKV-----------------GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLIN---SKGE 138 (264)
T ss_pred EecCCCcHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEEC---CCCC
Confidence 999999998877432 678999999999999999999999 9999999999999998 4789
Q ss_pred eeEEecCCCcccCCCCCc-cccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCC---ChhHHHHHHHhC
Q 008127 256 LKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDK---TEDGIFKEVLRN 330 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~-~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~---~~~~~~~~i~~~ 330 (577)
++|+|||++......... ....++..|+|||.+.+. ++.++|+||||+++|+|++|..||... ...+....+...
T Consensus 139 ~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~ 218 (264)
T cd06623 139 VKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDG 218 (264)
T ss_pred EEEccCccceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcC
Confidence 999999999876543332 256789999999987654 578999999999999999999999776 334444444432
Q ss_pred CCCCCCCCCCC-CCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 331 KPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 331 ~~~~~~~~~~~-~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
... ..... ++..+.++|.+||..+|.+|||+.++++||||+..
T Consensus 219 ~~~---~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 219 PPP---SLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred CCC---CCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 221 11223 78899999999999999999999999999999764
No 232
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.3e-40 Score=335.66 Aligned_cols=266 Identities=24% Similarity=0.329 Sum_probs=207.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCE--EEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~--vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
++|++.+.||+|+||.||+|.++.++.. +|+|.+... ........+.+|+.++.++.+||||+++++++..++.+|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc--CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence 3689999999999999999998888765 477665432 223455678899999999966999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+||||+++|+|.+++......... ............+++..++.++.||+.||.|||++||+||||||+|||++ .+
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~---~~ 160 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETD-PAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---EN 160 (303)
T ss_pred EEEEeCCCCcHHHHHHhccccccc-ccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEec---CC
Confidence 999999999999988654211000 00001111234689999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+.+||+|||++.............++..|+|||.+.+. ++.++|||||||++|+|+| |..||.+.+..+....+....
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~ 240 (303)
T cd05088 161 YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY 240 (303)
T ss_pred CcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCC
Confidence 78999999998643221111122346679999987654 5889999999999999998 999998877776666553321
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
....+..+++++.+|+.+||..+|.+||++.+++.+
T Consensus 241 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 241 ---RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred ---cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 111223578899999999999999999999999875
No 233
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=7.5e-41 Score=333.05 Aligned_cols=253 Identities=35% Similarity=0.663 Sum_probs=217.0
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|.+.+.||.|+||.||+|.+..+|+.||+|++.+...........+.+|+.+++++.+||||+++++++...+.+++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 69999999999999999999999999999999876544444456778899999999955999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+.+... ..+++..++.++.|++.||.|||+.|++|+||+|+||+++ .++.+
T Consensus 82 e~~~~~~L~~~l~~~-----------------~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~---~~~~~ 141 (280)
T cd05581 82 EYAPNGELLQYIRKY-----------------GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLD---KDMHI 141 (280)
T ss_pred cCCCCCcHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCE
Confidence 999999998877432 5799999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCC---------------------CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCC
Q 008127 257 KATDFGLSDFIKPGK---------------------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRP 314 (577)
Q Consensus 257 kl~DFGla~~~~~~~---------------------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~P 314 (577)
+|+|||++....... ......|+..|+|||++.+. ++.++||||||+++++|++|..|
T Consensus 142 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p 221 (280)
T cd05581 142 KITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPP 221 (280)
T ss_pred EecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCC
Confidence 999999987654321 12234688999999987654 57889999999999999999999
Q ss_pred CCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCH----HHHhcCccc
Q 008127 315 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA----AQALSHPWV 373 (577)
Q Consensus 315 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~----~~il~hp~f 373 (577)
|...+....+..+......++ ..+++.+.+||.+||+.+|.+|||+ .++++||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 222 FRGSNEYLTFQKILKLEYSFP----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred CCCccHHHHHHHHHhcCCCCC----CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 988776666666654433322 4568899999999999999999999 999999998
No 234
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.3e-40 Score=332.19 Aligned_cols=265 Identities=19% Similarity=0.264 Sum_probs=211.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCC-----CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANG-----DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~-----~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
.+|++.+.||+|+||.||+|.+...+ ..||+|.+.... .......+.+|+.++..+ +||||+++++++...+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~ 81 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDL-QHPNIVCLLGVCTKEQ 81 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhc-CCcccceEEEEEcCCC
Confidence 36899999999999999999876554 679999886443 234556789999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
..|++|||+++|+|.+++........... ..........+++..++.++.||+.||.|||++|++||||||+||+++
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~-- 158 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGA-ESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVG-- 158 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCccccc-ccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEc--
Confidence 99999999999999988865311100000 000001125688999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCC---CccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
.++.+||+|||++....... ......+++.|+|||.+. +.++.++|||||||++|||++ |..||.+....++..
T Consensus 159 -~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~ 237 (283)
T cd05048 159 -EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIE 237 (283)
T ss_pred -CCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 47789999999997653322 123446788999999775 456889999999999999998 999999888887777
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
.+....... ....+++++.+|+.+||..||.+||++.+++++
T Consensus 238 ~i~~~~~~~---~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 238 MIRSRQLLP---CPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HHHcCCcCC---CcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 766543221 224688999999999999999999999999874
No 235
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.5e-41 Score=360.28 Aligned_cols=268 Identities=21% Similarity=0.257 Sum_probs=196.6
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCC-CEEEEE--------------EecccccCchhhHHHHHHHHHHHHHhcCC
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANG-DRVAVK--------------KIEKNKMILPIAVEDVKREVKILQALAGH 156 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~-~~vaiK--------------~i~~~~~~~~~~~~~~~~E~~~l~~l~~h 156 (577)
..+..+|++++.||+|+||+||+|..+... ..+++| .+.+...........+.+|+.+|+++ +|
T Consensus 144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l-~H 222 (501)
T PHA03210 144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRL-NH 222 (501)
T ss_pred hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhC-CC
Confidence 345678999999999999999998764322 222222 11111111123456688999999999 59
Q ss_pred CCeeEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCce
Q 008127 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 236 (577)
Q Consensus 157 pniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~ii 236 (577)
|||+++++++...+..|+|++++ +++|.+++..... ..........++.++.||+.||.|||++|||
T Consensus 223 pnIv~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~------------~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIi 289 (501)
T PHA03210 223 ENILKIEEILRSEANTYMITQKY-DFDLYSFMYDEAF------------DWKDRPLLKQTRAIMKQLLCAVEYIHDKKLI 289 (501)
T ss_pred CCcCcEeEEEEECCeeEEEEecc-ccCHHHHHhhccc------------cccccccHHHHHHHHHHHHHHHHHHHhCCee
Confidence 99999999999999999999999 4678777654311 1123345677889999999999999999999
Q ss_pred eccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCC--ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCC
Q 008127 237 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRR 313 (577)
Q Consensus 237 HrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~ 313 (577)
||||||+|||++ .++.+||+|||++..+..... ....+||+.|+|||++.+ .++.++|||||||++|||++|..
T Consensus 290 HrDLKP~NILl~---~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~ 366 (501)
T PHA03210 290 HRDIKLENIFLN---CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDF 366 (501)
T ss_pred cCCCCHHHEEEC---CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 999999999998 478899999999987654322 234689999999998865 46889999999999999999876
Q ss_pred CCCCC---ChhHHHHHHHhCCC----CCCC----------------C--------CCCCCCHHHHHHHHHccccCcCCCC
Q 008127 314 PFWDK---TEDGIFKEVLRNKP----DFRR----------------K--------PWPSISNSAKDFVKKLLVKDPRARL 362 (577)
Q Consensus 314 Pf~~~---~~~~~~~~i~~~~~----~~~~----------------~--------~~~~~s~~~~~li~~~l~~dP~~Rp 362 (577)
|++.. .....+.+++.... .++. . ....++..+.++|.+||.+||.+||
T Consensus 367 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rp 446 (501)
T PHA03210 367 CPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRP 446 (501)
T ss_pred CCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCc
Confidence 55432 22222222222100 0000 0 0012556788899999999999999
Q ss_pred CHHHHhcCcccccc
Q 008127 363 TAAQALSHPWVREG 376 (577)
Q Consensus 363 t~~~il~hp~f~~~ 376 (577)
|+.++|.||||...
T Consensus 447 sa~elL~hp~f~~~ 460 (501)
T PHA03210 447 GAAELLALPLFSAE 460 (501)
T ss_pred CHHHHhhChhhhcC
Confidence 99999999999864
No 236
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-42 Score=343.96 Aligned_cols=250 Identities=26% Similarity=0.397 Sum_probs=209.5
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.+...+...||+|.||+||+|++.. .||||++...... +...+.|++|+.++++-+ |-||+-+.|+|..++. .|
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt-~~qlqaFKnEVa~lkkTR-H~NIlLFMG~~~~p~~-AI 464 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPT-PEQLQAFKNEVAVLKKTR-HENILLFMGACMNPPL-AI 464 (678)
T ss_pred HHHhhccceeccccccceeeccccc---ceEEEEEecCCCC-HHHHHHHHHHHHHHhhcc-hhhheeeehhhcCCce-ee
Confidence 3457788999999999999998764 6999999876553 458899999999999996 9999999999998887 99
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|+.+|+|-+|+.+|+.. ...|.....+.|++||+.|+.|||.++|||||||..||+|. +++
T Consensus 465 iTqwCeGsSLY~hlHv~----------------etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~---~~~ 525 (678)
T KOG0193|consen 465 ITQWCEGSSLYTHLHVQ----------------ETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLH---EDL 525 (678)
T ss_pred eehhccCchhhhhccch----------------hhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEc---cCC
Confidence 99999999999988643 35678889999999999999999999999999999999998 468
Q ss_pred CeeEEecCCCcccC---CCCCccccccCCccccchhccc----CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 255 SLKATDFGLSDFIK---PGKKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 255 ~vkl~DFGla~~~~---~~~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.|||+|||++.... ....+....|...|||||++.. .+++.+||||||||+|||++|..||.....+.++-.+
T Consensus 526 kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmV 605 (678)
T KOG0193|consen 526 KVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMV 605 (678)
T ss_pred cEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEe
Confidence 99999999986432 2233445678889999999863 4588999999999999999999999977777776665
Q ss_pred HhCCCCCCC-CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 328 LRNKPDFRR-KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 328 ~~~~~~~~~-~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
-++...... ....+.++++++|+..||.++|++||+..+||.
T Consensus 606 GrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 606 GRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred cccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 555222111 123456779999999999999999999999876
No 237
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-42 Score=332.24 Aligned_cols=274 Identities=29% Similarity=0.459 Sum_probs=224.4
Q ss_pred CCccccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCch----hhHHHHHHHHHHHHHhcCCCCeeEE
Q 008127 87 DFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP----IAVEDVKREVKILQALAGHENVVKF 162 (577)
Q Consensus 87 ~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~----~~~~~~~~E~~~l~~l~~hpniv~~ 162 (577)
.|.....+.++|.++.+||+|+|+.||+|.|....++||||+-..++.|.. ...+...+|.+|.+.| +||.||++
T Consensus 454 QFkDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeL-DHpRIVKl 532 (775)
T KOG1151|consen 454 QFKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKEL-DHPRIVKL 532 (775)
T ss_pred hhccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhcc-Ccceeeee
Confidence 344455677899999999999999999999999999999998665544433 3456678999999999 79999999
Q ss_pred EEEEE-cCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc--Cceecc
Q 008127 163 YNAFE-DDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRD 239 (577)
Q Consensus 163 ~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~--~iiHrD 239 (577)
|++|. +.+.+|-|+|||+|.+|.-+|.+ +..+++.+++.|+.||+.||.||... .|||-|
T Consensus 533 YDyfslDtdsFCTVLEYceGNDLDFYLKQ-----------------hklmSEKEARSIiMQiVnAL~YLNEikpPIIHYD 595 (775)
T KOG1151|consen 533 YDYFSLDTDSFCTVLEYCEGNDLDFYLKQ-----------------HKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYD 595 (775)
T ss_pred eeeeeeccccceeeeeecCCCchhHHHHh-----------------hhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeec
Confidence 99997 55678999999999998766544 47799999999999999999999975 699999
Q ss_pred CCCCcEEeecCCCCCCeeEEecCCCcccCCCCC--------ccccccCCccccchhcc-c----CCCCCCchhhHHHHHH
Q 008127 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK--------FQDIVGSAYYVAPEVLK-R----KSGPESDVWSIGVITY 306 (577)
Q Consensus 240 lKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~--------~~~~~gt~~y~aPE~~~-~----~~~~~~DiwSlG~il~ 306 (577)
|||.||||.+....|.+||+|||+++.+..... .....||.||++||+|. + +.+.++||||+|||+|
T Consensus 596 LKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFy 675 (775)
T KOG1151|consen 596 LKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFY 675 (775)
T ss_pred cCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhh
Confidence 999999998766678999999999998754321 23468999999999874 3 2378899999999999
Q ss_pred HHHhCCCCCCCC-ChhHHHHH-HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 307 ILLCGRRPFWDK-TEDGIFKE-VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 307 el~tg~~Pf~~~-~~~~~~~~-i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.+++|+.||... +..+++.. .+....+...++-|.++.++++||++||.+.-++|....++..||||..+..
T Consensus 676 QClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh~r 749 (775)
T KOG1151|consen 676 QCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPHIR 749 (775)
T ss_pred hhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccchhh
Confidence 999999999654 33344332 1222333444455779999999999999999999999999999999987543
No 238
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=4e-40 Score=326.00 Aligned_cols=249 Identities=27% Similarity=0.433 Sum_probs=201.1
Q ss_pred eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
...||+|+||.||+|.+..++..||+|.+.... ....+.+.+|+.+++.+ +||||+++++++..++..++|+||++
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 88 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD---SRYVQPLHEEIALHSYL-KHRNIVQYLGSDSENGFFKIFMEQVP 88 (268)
T ss_pred eEEEecCCceEEEEeEecCCCcEEEEEEecCCC---HHHHHHHHHHHHHHHhc-CCCCeeeeeeeeccCCEEEEEEecCC
Confidence 357999999999999999999999999886543 23456789999999999 49999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCC--CHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeE
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRY--TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 258 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl 258 (577)
+++|.+.+... ...+ ++..+..++.||+.||.|||+.||+||||||+||+++. .++.++|
T Consensus 89 ~~~L~~~l~~~----------------~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~--~~~~~~l 150 (268)
T cd06624 89 GGSLSALLRSK----------------WGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT--YSGVVKI 150 (268)
T ss_pred CCCHHHHHHHh----------------cccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC--CCCeEEE
Confidence 99999877533 1234 77888899999999999999999999999999999973 3568999
Q ss_pred EecCCCcccCCCC-CccccccCCccccchhcccC---CCCCCchhhHHHHHHHHHhCCCCCCCCChhH-HHHHHHhCCCC
Q 008127 259 TDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDG-IFKEVLRNKPD 333 (577)
Q Consensus 259 ~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~---~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~-~~~~i~~~~~~ 333 (577)
+|||++....... ......|++.|+|||++.+. ++.++||||||+++|+|++|+.||....... ........ .
T Consensus 151 ~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~--~ 228 (268)
T cd06624 151 SDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMF--K 228 (268)
T ss_pred ecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhh--c
Confidence 9999987654322 22345689999999987542 5789999999999999999999996543221 11111100 1
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
........+++++.+|+.+||..+|.+|||+.+++.||||
T Consensus 229 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 229 IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 1111124578899999999999999999999999999997
No 239
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=319.37 Aligned_cols=257 Identities=24% Similarity=0.462 Sum_probs=224.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|.++++||+|+|++|.+++.++|.+.||+|++++.-.........+..|-.+..+.++||.+|.+..+|..+..+++|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 46999999999999999999999999999999998876666667788899999999999999999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
.||++||+|.-++.+ ...+++++++.+...|+.||+|||++|||+||||.+|+|++. .++
T Consensus 330 ieyv~ggdlmfhmqr-----------------qrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvllda---egh 389 (593)
T KOG0695|consen 330 IEYVNGGDLMFHMQR-----------------QRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDA---EGH 389 (593)
T ss_pred EEEecCcceeeehhh-----------------hhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEcc---CCc
Confidence 999999999765543 378999999999999999999999999999999999999994 789
Q ss_pred eeEEecCCCcc-cCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCC-------CCChhHH-HH
Q 008127 256 LKATDFGLSDF-IKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFW-------DKTEDGI-FK 325 (577)
Q Consensus 256 vkl~DFGla~~-~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~-------~~~~~~~-~~ 325 (577)
+||+|+|+++. +.++....++||||.|+|||++.+. |+..+|+|+|||+++||+.|+.||. +.+.++. ++
T Consensus 390 ikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfq 469 (593)
T KOG0695|consen 390 IKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQ 469 (593)
T ss_pred eeecccchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHH
Confidence 99999999975 5667778899999999999999875 7999999999999999999999993 2333344 44
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCC------CHHHHhcCcccccc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL------TAAQALSHPWVREG 376 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp------t~~~il~hp~f~~~ 376 (577)
-|+......++ .+|-.+..+++..|.+||.+|. ...++..|+||+..
T Consensus 470 vilekqiripr----slsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~i 522 (593)
T KOG0695|consen 470 VILEKQIRIPR----SLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSI 522 (593)
T ss_pred HHhhhcccccc----eeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhC
Confidence 44444444333 4677788999999999999997 46899999999864
No 240
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=6.9e-41 Score=342.43 Aligned_cols=263 Identities=31% Similarity=0.495 Sum_probs=209.9
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc----CC
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----DN 170 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----~~ 170 (577)
..+|++.+.||.|+||.||+|.+..+|..||+|++..... .......+.+|+.+++++. ||||+++++++.. ..
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 81 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFK-HDNIIAIRDILRPPGADFK 81 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcC-CCCccCHHHhccccCCCCc
Confidence 3679999999999999999999999999999999875432 1234566788999999995 9999999988753 45
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+|+||||+. |+|.+.+. ....+++..++.++.||+.||.|||++||+||||||+||+++
T Consensus 82 ~~~lv~e~~~-~~l~~~~~-----------------~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~-- 141 (334)
T cd07855 82 DVYVVMDLME-SDLHHIIH-----------------SDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVN-- 141 (334)
T ss_pred eEEEEEehhh-hhHHHHhc-----------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc--
Confidence 7899999995 57766553 235689999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCC-----ccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 323 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~-----~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~ 323 (577)
.++.+||+|||++........ ....+|+..|+|||++.+ .++.++|||||||++|+|++|+.||.+......
T Consensus 142 -~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~ 220 (334)
T cd07855 142 -EDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQ 220 (334)
T ss_pred -CCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHH
Confidence 478999999999976532211 134578999999998754 358899999999999999999999977654433
Q ss_pred HHHHHhC-----------------------CCCCCCCC----CCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 324 FKEVLRN-----------------------KPDFRRKP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 324 ~~~i~~~-----------------------~~~~~~~~----~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
+..+... ........ ++.++.++.++|.+||+.+|.+|||+.+++.||||...
T Consensus 221 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~ 300 (334)
T cd07855 221 LKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQY 300 (334)
T ss_pred HHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhc
Confidence 3222211 01111111 24578899999999999999999999999999999876
Q ss_pred CCCC
Q 008127 377 GDAS 380 (577)
Q Consensus 377 ~~~~ 380 (577)
....
T Consensus 301 ~~~~ 304 (334)
T cd07855 301 HDPD 304 (334)
T ss_pred cCCc
Confidence 5443
No 241
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.5e-40 Score=334.08 Aligned_cols=255 Identities=30% Similarity=0.548 Sum_probs=212.9
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
|.....||.|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.++..+ +||||+++++.+..++.+|+|||
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~iv~e 98 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDY-QHQNVVEMYKSYLVGEELWVLME 98 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc---chHHHHHHHHHHHHhC-CCCchhhhhhheeeCCeEEEEEe
Confidence 4555679999999999999999999999999865432 2346688999999999 59999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
|+++++|.+.+. ...+++..++.++.|++.||.|||++||+||||||+||+++ .++.+|
T Consensus 99 ~~~~~~L~~~~~------------------~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~---~~~~~k 157 (297)
T cd06659 99 FLQGGALTDIVS------------------QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLT---LDGRVK 157 (297)
T ss_pred cCCCCCHHHHHh------------------hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEc---cCCcEE
Confidence 999999877542 24578999999999999999999999999999999999998 478999
Q ss_pred EEecCCCcccCCCC-CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008127 258 ATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335 (577)
Q Consensus 258 l~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~ 335 (577)
|+|||++....... ......|++.|+|||++.+ .++.++|||||||++|+|++|+.||......+.+..+...... .
T Consensus 158 L~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~ 236 (297)
T cd06659 158 LSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPP-K 236 (297)
T ss_pred EeechhHhhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCC-C
Confidence 99999987554322 2234679999999998865 4588999999999999999999999877766665555433222 2
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 336 ~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
...+..++..+.++|.+||+.+|.+||++.++++||||.....
T Consensus 237 ~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 237 LKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred ccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence 2234567889999999999999999999999999999987553
No 242
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=3e-40 Score=328.61 Aligned_cols=259 Identities=22% Similarity=0.309 Sum_probs=209.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
+.|.+.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.+ +||||+++++++...+
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--SEQDESDFLMEALIMSKF-NHQNIVRLIGVSFERL 82 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEccCC
Confidence 569999999999999999999877 77889999876432 233456788999999999 5999999999999988
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
..++||||++|++|.+++...... ......+++..++.++.||+.||.|||+++++||||||+|||++..
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~----------~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~ 152 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPR----------PERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCK 152 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCC----------CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEecc
Confidence 999999999999999887654210 0112368999999999999999999999999999999999999864
Q ss_pred CCCCCeeEEecCCCcccCCCCCc---cccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
+....+||+|||+++........ ....++..|+|||++. +.++.++|||||||++|+|++ |..||.+.+..+...
T Consensus 153 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~ 232 (277)
T cd05036 153 GPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVME 232 (277)
T ss_pred CCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 44567999999999876322211 1223456799999875 456899999999999999997 999998887777666
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
.+..... . .....++..+.+++.+||..+|++|||+.++++|
T Consensus 233 ~~~~~~~-~--~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 233 FVTGGGR-L--DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred HHHcCCc-C--CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 5554322 1 1224578999999999999999999999999986
No 243
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.4e-40 Score=331.63 Aligned_cols=256 Identities=27% Similarity=0.524 Sum_probs=210.2
Q ss_pred ceeeeeeecccCCeEEEEEEEc---CCCCEEEEEEecccccC-chhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMI-LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.|++.+.||.|+||.||+|.+. .+|..||+|++...... .....+.+.+|+.+++++.+||||+.+++++..+..+
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 3889999999999999999874 47899999998654321 1224467889999999997799999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+||||+++++|.+++... ..+++..+..++.||+.||.|||+.|++||||||+|||++ .
T Consensus 81 ~lv~e~~~~~~L~~~l~~~-----------------~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~---~ 140 (290)
T cd05613 81 HLILDYINGGELFTHLSQR-----------------ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLD---S 140 (290)
T ss_pred EEEEecCCCCcHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEC---C
Confidence 9999999999998877432 5688999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCCC--CccccccCCccccchhccc---CCCCCCchhhHHHHHHHHHhCCCCCCCCCh----hHH
Q 008127 253 DSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTE----DGI 323 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~---~~~~~~DiwSlG~il~el~tg~~Pf~~~~~----~~~ 323 (577)
++.+||+|||++....... ......|+..|+|||.+.+ .++.++||||||+++|+|++|..||..... .++
T Consensus 141 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~ 220 (290)
T cd05613 141 NGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEI 220 (290)
T ss_pred CCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHH
Confidence 7899999999997654322 2234578999999998764 347789999999999999999999964322 333
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
...+....+.+ .+.+++.+.+++.+||..||.+|| ++.+++.||||...
T Consensus 221 ~~~~~~~~~~~----~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 274 (290)
T cd05613 221 SRRILKSEPPY----PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKI 274 (290)
T ss_pred HHHhhccCCCC----CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccC
Confidence 33343333322 235788999999999999999997 89999999999875
No 244
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=5.9e-40 Score=327.89 Aligned_cols=256 Identities=31% Similarity=0.564 Sum_probs=213.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
.|...+.||.|++|.||++.+..+++.+|+|.+.... ....+.+.+|+.+++.+ +||||+++++++...+..++|+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~~-~h~~vv~~~~~~~~~~~~~~v~ 95 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK---QQRRELLFNEVVIMRDY-QHPNIVEMYSSYLVGDELWVVM 95 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc---hhHHHHHHHHHHHHHHc-CCCChheEEEEEEcCCeEEEEE
Confidence 4555678999999999999999999999999885432 23445688999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+.+.. ..+++..+..++.||+.||.|||++||+||||+|+||+++ .++.+
T Consensus 96 e~~~~~~L~~~~~~------------------~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~ 154 (285)
T cd06648 96 EFLEGGALTDIVTH------------------TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLT---SDGRV 154 (285)
T ss_pred eccCCCCHHHHHHh------------------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEc---CCCcE
Confidence 99999999876531 4578899999999999999999999999999999999998 47899
Q ss_pred eEEecCCCcccCCCC-CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+|+|||++....... ......|++.|+|||.+.+. ++.++|||||||++|+|++|..||...+.......+....+..
T Consensus 155 ~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~ 234 (285)
T cd06648 155 KLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPK 234 (285)
T ss_pred EEcccccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCC
Confidence 999999887543221 22345789999999988654 5889999999999999999999998877766666665543222
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.. ....++..+.+||.+||..+|.+|||+.++++||||+....
T Consensus 235 ~~-~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 277 (285)
T cd06648 235 LK-NLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGP 277 (285)
T ss_pred Cc-ccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCC
Confidence 11 12347889999999999999999999999999999988654
No 245
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=346.40 Aligned_cols=249 Identities=32% Similarity=0.504 Sum_probs=211.8
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.+.+.|.+...+|.|+|+.|-.+.+..+++.+++|++.+... ...+|+.++....+||||+++.+++.+..+.
T Consensus 319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~-------~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~ 391 (612)
T KOG0603|consen 319 PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD-------DNQDEIPISLLVRDHPNIVKSHDVYEDGKEI 391 (612)
T ss_pred CcchhhccccccCCCCccceeeeeccccccchhheecccccc-------ccccccchhhhhcCCCcceeecceecCCcee
Confidence 356789999999999999999999999999999999977621 2346777777777999999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+|||++.|+.|++.+..+ ..++ ..+..|+.+|+.|+.|||++|||||||||+|||++ +.
T Consensus 392 ~~v~e~l~g~ell~ri~~~-----------------~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--~~ 451 (612)
T KOG0603|consen 392 YLVMELLDGGELLRRIRSK-----------------PEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--GS 451 (612)
T ss_pred eeeehhccccHHHHHHHhc-----------------chhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--CC
Confidence 9999999999999877543 3333 77888999999999999999999999999999995 25
Q ss_pred CCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChh-HHHHHHHhC
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRN 330 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~-~~~~~i~~~ 330 (577)
.++++|+|||.++..... ..+.+-|..|.|||++.. .++++|||||||++||+|++|+.||.....+ +++..+..+
T Consensus 452 ~g~lrltyFG~a~~~~~~--~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~ 529 (612)
T KOG0603|consen 452 AGHLRLTYFGFWSELERS--CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMP 529 (612)
T ss_pred CCcEEEEEechhhhCchh--hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCC
Confidence 789999999999887654 445577899999999875 5699999999999999999999999877665 444444333
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.. . ..+|..+++||..||+.||.+||++.+++.||||...
T Consensus 530 ~~--s----~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~~~ 569 (612)
T KOG0603|consen 530 KF--S----ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFLSH 569 (612)
T ss_pred cc--c----cccCHHHHHHHHHhccCChhhCcChhhhccCcchhcC
Confidence 22 1 4689999999999999999999999999999999433
No 246
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=3.8e-40 Score=325.28 Aligned_cols=248 Identities=22% Similarity=0.324 Sum_probs=208.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
..|.+.+.||.|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ .||||+++++++..++.+++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 80 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYII 80 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc----hHHHHHHHHHHHHHhC-CCCChhheEEEEcCCCCcEEE
Confidence 35899999999999999999999999999999986543 2456788999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++++|.+++... ....+++..++.++.|++.||.|||++|++||||||+|||++ .++.
T Consensus 81 ~e~~~~~~L~~~~~~~---------------~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~---~~~~ 142 (263)
T cd05052 81 TEFMTYGNLLDYLREC---------------NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHL 142 (263)
T ss_pred EEeCCCCcHHHHHHhC---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc---CCCc
Confidence 9999999999877432 234688899999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCCCc--cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+||+|||++......... ....++..|+|||.+.+ .++.++|||||||++|+|++ |..||.+....+....+....
T Consensus 143 ~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~ 222 (263)
T cd05052 143 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGY 222 (263)
T ss_pred EEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC
Confidence 999999999876533211 12234668999998764 45889999999999999998 999998887777766665432
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.......++.++.++|.+||..||.+|||+.++++
T Consensus 223 ---~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 223 ---RMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred ---CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 12223567899999999999999999999999875
No 247
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2.8e-40 Score=331.55 Aligned_cols=261 Identities=28% Similarity=0.494 Sum_probs=214.5
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
..+|.+.+.||.|+||.||++.+..++..||+|.+..... ...+.+.+|+.+++.+. ||||+++++++...+.+|+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~l 93 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ---PKKELIINEILVMRENK-HPNIVNYLDSYLVGDELWV 93 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc---hHHHHHHHHHHHHhhcC-CCCeeehhheeeeCCcEEE
Confidence 3589999999999999999999988999999999864432 23567889999999994 9999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|+||+++++|.+++.. ..+++..+..++.|++.||.|||++|++||||||+||+++ .++
T Consensus 94 v~e~~~~~~L~~~~~~------------------~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~---~~~ 152 (293)
T cd06647 94 VMEYLAGGSLTDVVTE------------------TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDG 152 (293)
T ss_pred EEecCCCCcHHHHHhh------------------cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEc---CCC
Confidence 9999999999886632 3578889999999999999999999999999999999998 477
Q ss_pred CeeEEecCCCcccCCCC-CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 255 SLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
.+||+|||++....... ......|++.|+|||.+.+ .++.++|||||||++|+|++|+.||...+.......+.....
T Consensus 153 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~ 232 (293)
T cd06647 153 SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT 232 (293)
T ss_pred CEEEccCcceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCC
Confidence 89999999887654332 2234578999999998764 458899999999999999999999977665444333322211
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCCC
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~~ 381 (577)
.....+..++..+.++|.+||..+|.+||++.+++.||||+.......
T Consensus 233 -~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~~~~ 280 (293)
T cd06647 233 -PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKPLSS 280 (293)
T ss_pred -CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCccccc
Confidence 111123456788999999999999999999999999999987654443
No 248
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.1e-40 Score=326.88 Aligned_cols=250 Identities=34% Similarity=0.563 Sum_probs=212.3
Q ss_pred ecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCCCc
Q 008127 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183 (577)
Q Consensus 104 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 183 (577)
||.|+||.||+|.+..+|+.||+|.+.............+.+|+++++++. ||||+++++.+......|+||||+++++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ-SPYVVKLYYSFQGKKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCC-CcchhHHHHheecCcEEEEEEecCCCCc
Confidence 689999999999999899999999987654433345678899999999995 9999999999999999999999999999
Q ss_pred hhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCC
Q 008127 184 LLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263 (577)
Q Consensus 184 L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGl 263 (577)
|.+.+... ..+++..+..++.||+.||.|||+.|++||||+|+||+++ .++.++|+|||+
T Consensus 80 L~~~l~~~-----------------~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~---~~~~~~l~dfg~ 139 (265)
T cd05579 80 LASLLENV-----------------GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILID---SNGHLKLTDFGL 139 (265)
T ss_pred HHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEc---CCCCEEEEeccc
Confidence 98876432 4789999999999999999999999999999999999998 478899999999
Q ss_pred CcccCCCC---------CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 264 SDFIKPGK---------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 264 a~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+....... ......++..|+|||.+.. ..+.++||||||+++|+|++|..||......+....+..+...
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 219 (265)
T cd05579 140 SKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIE 219 (265)
T ss_pred chhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcC
Confidence 87543321 2234568889999998764 3578999999999999999999999888888777777664433
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCH---HHHhcCcccccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTA---AQALSHPWVREG 376 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~---~~il~hp~f~~~ 376 (577)
++. ...++..+.+++.+||+.+|.+|||+ .++|+||||+..
T Consensus 220 ~~~--~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 220 WPE--DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred CCc--cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 322 12348999999999999999999999 999999999853
No 249
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=3.1e-40 Score=337.86 Aligned_cols=263 Identities=25% Similarity=0.405 Sum_probs=210.2
Q ss_pred cccceee-eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchh-----------hHHHHHHHHHHHHHhcCCCCeeE
Q 008127 94 FDRRYTI-GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPI-----------AVEDVKREVKILQALAGHENVVK 161 (577)
Q Consensus 94 ~~~~y~~-~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~-----------~~~~~~~E~~~l~~l~~hpniv~ 161 (577)
+.++|.. .+.||.|+||.||+|.+..+++.||||.+......... ....+.+|+.+++.+ +||||++
T Consensus 6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~ 84 (335)
T PTZ00024 6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEI-KHENIMG 84 (335)
T ss_pred cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhC-CCcceee
Confidence 4457764 57899999999999999999999999998654321100 112477899999999 5999999
Q ss_pred EEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCC
Q 008127 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 241 (577)
Q Consensus 162 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlK 241 (577)
+++++...+..|+||||+. |+|.+.+.. ...+++..+..++.||+.||.|||+.||+|||||
T Consensus 85 ~~~~~~~~~~~~lv~e~~~-~~l~~~l~~-----------------~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~ 146 (335)
T PTZ00024 85 LVDVYVEGDFINLVMDIMA-SDLKKVVDR-----------------KIRLTESQVKCILLQILNGLNVLHKWYFMHRDLS 146 (335)
T ss_pred eeEEEecCCcEEEEEeccc-cCHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence 9999999999999999996 588776632 3568999999999999999999999999999999
Q ss_pred CCcEEeecCCCCCCeeEEecCCCcccCC---------------CCCccccccCCccccchhcccC--CCCCCchhhHHHH
Q 008127 242 PENFLFKSAKEDSSLKATDFGLSDFIKP---------------GKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVI 304 (577)
Q Consensus 242 p~NILl~~~~~~~~vkl~DFGla~~~~~---------------~~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~i 304 (577)
|+||+++ .++.+||+|||++..... ........+++.|+|||.+.+. ++.++|||||||+
T Consensus 147 ~~nill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~ 223 (335)
T PTZ00024 147 PANIFIN---SKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCI 223 (335)
T ss_pred HHHeEEC---CCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHH
Confidence 9999998 478899999999876541 1112234578899999988653 4789999999999
Q ss_pred HHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC------------------------CCCCCCHHHHHHHHHccccCcCC
Q 008127 305 TYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK------------------------PWPSISNSAKDFVKKLLVKDPRA 360 (577)
Q Consensus 305 l~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~s~~~~~li~~~l~~dP~~ 360 (577)
+|+|++|.+||.+.+..+.+..+.......... ..+..+..+.++|.+||..+|++
T Consensus 224 l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~ 303 (335)
T PTZ00024 224 FAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLE 303 (335)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchh
Confidence 999999999998887766665554321111000 01345788999999999999999
Q ss_pred CCCHHHHhcCccccccCC
Q 008127 361 RLTAAQALSHPWVREGGD 378 (577)
Q Consensus 361 Rpt~~~il~hp~f~~~~~ 378 (577)
|||+.++|.||||+....
T Consensus 304 R~s~~~~l~~~~~~~~~~ 321 (335)
T PTZ00024 304 RISAKEALKHEYFKSDPL 321 (335)
T ss_pred ccCHHHHhcCcccCCCCC
Confidence 999999999999997654
No 250
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=7.5e-40 Score=332.23 Aligned_cols=260 Identities=27% Similarity=0.453 Sum_probs=216.4
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
...+.|...+.||+|+||.||+|++..+|..||+|.+.............+.+|+.+++.+ +|||++++++++..+...
T Consensus 22 ~~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~ 100 (317)
T cd06635 22 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI-KHPNSIEYKGCYLREHTA 100 (317)
T ss_pred CchhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCeE
Confidence 3445688999999999999999999999999999998765443344566788999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+||||++ |+|.+.+... ...+++..+..++.||+.||.|||+.||+||||+|+||+++ .
T Consensus 101 ~lv~e~~~-g~l~~~~~~~----------------~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~---~ 160 (317)
T cd06635 101 WLVMEYCL-GSASDLLEVH----------------KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT---E 160 (317)
T ss_pred EEEEeCCC-CCHHHHHHHh----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEEC---C
Confidence 99999996 4777655322 35689999999999999999999999999999999999997 4
Q ss_pred CCCeeEEecCCCcccCCCCCccccccCCccccchhcc----cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
++.+||+|||++...... ....|++.|+|||.+. +..+.++|||||||++|+|++|..||...........+.
T Consensus 161 ~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~ 237 (317)
T cd06635 161 PGQVKLADFGSASIASPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA 237 (317)
T ss_pred CCCEEEecCCCccccCCc---ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH
Confidence 788999999998765432 3457899999999863 346889999999999999999999998877666666665
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
..... ......+++.+.+||.+||..+|.+||++.++++|+|+.....
T Consensus 238 ~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 285 (317)
T cd06635 238 QNESP--TLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP 285 (317)
T ss_pred hccCC--CCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence 54322 1122456788999999999999999999999999999976543
No 251
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=3.3e-40 Score=329.64 Aligned_cols=254 Identities=31% Similarity=0.501 Sum_probs=208.6
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC--CeEEEE
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NYVYIA 175 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~~lv 175 (577)
|++.+.||.|+||.||+|.+..+|+.+|+|.+.... ........+.+|+.+++.+. |||++++++++... +..++|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv 78 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLR-HPNIVRLKEIVTSKGKGSIYMV 78 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhcc-CCCeeeheeeEecCCCCcEEEE
Confidence 678899999999999999999999999999987653 12234466889999999995 99999999999987 899999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++ +|.+.+... ...+++..++.++.||+.||.|||+.|++|+||||+||+++ .++.
T Consensus 79 ~e~~~~-~l~~~~~~~----------------~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~---~~~~ 138 (287)
T cd07840 79 FEYMDH-DLTGLLDSP----------------EVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILIN---NDGV 138 (287)
T ss_pred eccccc-cHHHHHhcc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEc---CCCC
Confidence 999974 777655321 25789999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCC--CccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+||+|||++....... ......++..|+|||.+.+ .++.++||||||+++|+|++|+.||...+....+..+....
T Consensus 139 ~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~ 218 (287)
T cd07840 139 LKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELC 218 (287)
T ss_pred EEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 9999999998765432 2334567889999997754 35889999999999999999999998887766666554422
Q ss_pred CCCCCCCC--------------------------CC-CCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 332 PDFRRKPW--------------------------PS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 332 ~~~~~~~~--------------------------~~-~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.......| .. +++.+.++|.+||..+|.+||++.++++||||
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 219 GSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred CCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 11111111 12 27889999999999999999999999999997
No 252
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.5e-40 Score=330.12 Aligned_cols=255 Identities=29% Similarity=0.479 Sum_probs=206.3
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
|++.+.||.|++|.||+|.++.+|..||+|++...... ......+.+|+.+++.+ +||||+++++++.+.+..|+|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l-~~~~iv~~~~~~~~~~~~~iv~e 78 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETED-EGVPSTAIREISLLKEL-NHPNIVRLLDVVHSENKLYLVFE 78 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeeccccc-ccchhHHHHHHHHHHhc-CCCCccCHhheeccCCeEEEEEe
Confidence 67788999999999999999999999999998754321 22345678899999999 49999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
|++ ++|.+++... ....+++..++.++.||+.||.|||+++++||||+|+||+++. ++.++
T Consensus 79 ~~~-~~l~~~~~~~---------------~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~---~~~~~ 139 (283)
T cd07835 79 FLD-LDLKKYMDSS---------------PLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDR---EGALK 139 (283)
T ss_pred ccC-cCHHHHHhhC---------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcC---CCcEE
Confidence 995 6887766432 1246899999999999999999999999999999999999984 78899
Q ss_pred EEecCCCcccCCC-CCccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC--
Q 008127 258 ATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP-- 332 (577)
Q Consensus 258 l~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~-- 332 (577)
|+|||++...... .......+++.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+....+..+.....
T Consensus 140 l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 219 (283)
T cd07835 140 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTP 219 (283)
T ss_pred EeecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 9999999765322 222334678999999987643 47889999999999999999999987665444443332110
Q ss_pred -------------------CC----CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 333 -------------------DF----RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 333 -------------------~~----~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.. .....+.++..+.++|.+||+.+|.+|||+.+++.||||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 220 DEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred ChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 00 011134577899999999999999999999999999998
No 253
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-41 Score=340.97 Aligned_cols=251 Identities=24% Similarity=0.365 Sum_probs=210.5
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCC---E-EEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGD---R-VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~---~-vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
+-.+.++||+|+||.||+|..+..+. . ||||..............++.+|.++|+.| +|||||++||+......+
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l-~H~NVVr~yGVa~~~~Pl 236 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQL-NHPNVVRFYGVAVLEEPL 236 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEcCCCcc
Confidence 45567899999999999998766432 3 899988754434566889999999999999 699999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
+||||+|.||+|.++|... ...++..+...++.+++.||+|||++++|||||-.+|+|++ .
T Consensus 237 ~ivmEl~~gGsL~~~L~k~----------------~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~---~ 297 (474)
T KOG0194|consen 237 MLVMELCNGGSLDDYLKKN----------------KKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYS---K 297 (474)
T ss_pred EEEEEecCCCcHHHHHHhC----------------CCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheec---C
Confidence 9999999999999988654 23689999999999999999999999999999999999998 3
Q ss_pred CCCeeEEecCCCcccCCCCCcccc-ccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDI-VGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~-~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~ 329 (577)
+..+||+|||+++........... .-...|+|||.+. +-+++++|||||||++||+++ |..||.+....++...|..
T Consensus 298 ~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~ 377 (474)
T KOG0194|consen 298 KGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVK 377 (474)
T ss_pred CCeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHh
Confidence 567899999999865421111111 2446899999886 456899999999999999999 8999999999999999966
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.....+.+ ...+.++..++.+||..+|++|||+.++.+
T Consensus 378 ~~~r~~~~--~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 378 NGYRMPIP--SKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred cCccCCCC--CCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 55443332 356788999999999999999999999866
No 254
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=3.2e-40 Score=326.43 Aligned_cols=254 Identities=28% Similarity=0.469 Sum_probs=208.2
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||+|.+..+|+.||||.+.............+.+|+.+++.+ +||||+++++++..++.+++||
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHc-cCCchhhhhheeEeCCeEEEEE
Confidence 688999999999999999999999999999988765443344567889999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+.+... ......+++..++.++.||+.||.|||++|++|+||||+||+++ .++.+
T Consensus 82 e~~~~~~L~~~~~~~-------------~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---~~~~~ 145 (267)
T cd08229 82 ELADAGDLSRMIKHF-------------KKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT---ATGVV 145 (267)
T ss_pred EecCCCCHHHHHHHh-------------hccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCCE
Confidence 999999998876432 11235689999999999999999999999999999999999998 47789
Q ss_pred eEEecCCCcccCCCCC-ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCCh--hHHHHHHHhCCC
Q 008127 257 KATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNKP 332 (577)
Q Consensus 257 kl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~--~~~~~~i~~~~~ 332 (577)
+|+|||++........ .....|+..|+|||++.+ .++.++||||||+++|+|++|..||.+... ......+...
T Consensus 146 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-- 223 (267)
T cd08229 146 KLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC-- 223 (267)
T ss_pred EECcchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcC--
Confidence 9999999876643322 234578999999998865 457889999999999999999999976543 2333333322
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.++...+..+++.+.++|.+||..||.+|||+.++++
T Consensus 224 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 224 DYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred CCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 2222233457889999999999999999999997764
No 255
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=6.3e-40 Score=322.32 Aligned_cols=245 Identities=24% Similarity=0.389 Sum_probs=204.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||+|+||.||+|.++ ++..+|+|.+..... ....+.+|+.+++.+ +||||+++++++...+.+++||
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~iv~ 78 (256)
T cd05114 5 ELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAM----SEEDFIEEAKVMMKL-SHPKLVQLYGVCTQQKPLYIVT 78 (256)
T ss_pred HcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCc----cHHHHHHHHHHHHHC-CCCCceeEEEEEccCCCEEEEE
Confidence 5889999999999999999865 456899998765432 345688999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++|+|.+.+... ...+++..+..++.|++.||.|||++||+||||||+||+++ .++.+
T Consensus 79 e~~~~~~L~~~~~~~----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~ 139 (256)
T cd05114 79 EFMENGCLLNYLRQR----------------QGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVS---STGVV 139 (256)
T ss_pred EcCCCCcHHHHHHhC----------------ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEc---CCCeE
Confidence 999999998876432 24578899999999999999999999999999999999998 47789
Q ss_pred eEEecCCCcccCCCCCc--cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCC
Q 008127 257 KATDFGLSDFIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
||+|||++......... ....++..|+|||++.+ .++.++||||||+++|+|++ |+.||...+..+....+..+..
T Consensus 140 kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~ 219 (256)
T cd05114 140 KVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFR 219 (256)
T ss_pred EECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCC
Confidence 99999999865432221 12345668999998864 45889999999999999999 9999988888878777766543
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
... ....+..+.+++.+||..+|.+|||+.++++
T Consensus 220 ~~~---~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 220 LYR---PKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred CCC---CCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 221 1336788999999999999999999999975
No 256
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=4.7e-40 Score=337.31 Aligned_cols=259 Identities=31% Similarity=0.508 Sum_probs=210.8
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC---
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN--- 170 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--- 170 (577)
+.++|++.+.||+|+||.||+|.+..+|..||||++.... ........+.+|+.+++.+ +||||+++++++..+.
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHM-KHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhc-CCCCccceeeeecCCcccc
Confidence 4568999999999999999999999999999999986432 1233456688999999999 5999999999987653
Q ss_pred ---eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 171 ---YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 171 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
.+++||||+ +++|.+.+. ...+++..++.++.||+.||.|||+.||+||||||+||++
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~------------------~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill 151 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMK------------------HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAV 151 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHh------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 468999999 778766442 2568999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
+ .++.+||+|||++..... ......+++.|+|||++.+ .++.++|+|||||++|+|++|..||.+......+.
T Consensus 152 ~---~~~~~kl~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~ 226 (343)
T cd07880 152 N---EDCELKILDFGLARQTDS--EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLM 226 (343)
T ss_pred c---CCCCEEEeeccccccccc--CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 8 478899999999986543 2234578999999998764 35788999999999999999999998776555444
Q ss_pred HHHhCCCC-----------------------CC----CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 326 EVLRNKPD-----------------------FR----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 326 ~i~~~~~~-----------------------~~----~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.++..... +. ...++.+++.+.++|.+||..||.+|||+.+++.||||+....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~ 306 (343)
T cd07880 227 EIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHD 306 (343)
T ss_pred HHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcC
Confidence 44331111 10 0113467888999999999999999999999999999987543
No 257
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=7.6e-40 Score=327.12 Aligned_cols=256 Identities=28% Similarity=0.432 Sum_probs=207.8
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc--CCCCeeEEEEEEEcCCe----
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFEDDNY---- 171 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~~~~---- 171 (577)
|++.+.||.|+||.||+|.++.+++.||+|.+...... ......+.+|+.+++++. +||||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSE-EGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEecccccc-chhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 67889999999999999999888999999998654321 222345677888887774 59999999999987766
Q ss_pred -EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 172 -VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 172 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
++++|||+. ++|.+++... ....+++..++.++.||+.||.|||+.+++|+||+|+||+++.
T Consensus 80 ~~~l~~e~~~-~~l~~~l~~~---------------~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~- 142 (287)
T cd07838 80 KLTLVFEHVD-QDLATYLSKC---------------PKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTS- 142 (287)
T ss_pred eeEEEehhcc-cCHHHHHHHc---------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEcc-
Confidence 999999996 4787766432 1235899999999999999999999999999999999999984
Q ss_pred CCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 251 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
++.+||+|||++.............++..|+|||++.+ .++.++|||||||++|+|++|.+||.+.+..+.+..+..
T Consensus 143 --~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~ 220 (287)
T cd07838 143 --DGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFD 220 (287)
T ss_pred --CCCEEEeccCcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHH
Confidence 68999999999987654444445568899999998765 458899999999999999999999988887777666654
Q ss_pred CCCC----------------CC-------CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 330 NKPD----------------FR-------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 330 ~~~~----------------~~-------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.... +. ....+.+++.+.++|.+||..||.+||++.+++.||||
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 221 VIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred HcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 2110 00 00112456788999999999999999999999999997
No 258
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.3e-39 Score=329.83 Aligned_cols=258 Identities=28% Similarity=0.450 Sum_probs=213.7
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
..+.|...+.||+|+||.||+|++..+|..||+|.+.............+.+|+.+++.+ +|||++++++++.+....|
T Consensus 19 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 97 (313)
T cd06633 19 PEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL-KHPNTIEYKGCYLKEHTAW 97 (313)
T ss_pred HHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCEEE
Confidence 334577888899999999999999999999999998765443344556788999999999 5999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+||||+. |+|.+.+.. ....+++..++.++.||+.||.|||++||+||||+|+||+++ .+
T Consensus 98 lv~e~~~-~~l~~~l~~----------------~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~---~~ 157 (313)
T cd06633 98 LVMEYCL-GSASDLLEV----------------HKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT---EP 157 (313)
T ss_pred EEEecCC-CCHHHHHHh----------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEEC---CC
Confidence 9999995 577765532 235688999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccccchhcc----cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
+.+||+|||++..... .....|+..|+|||++. +.++.++|||||||++|+|++|..||...........+..
T Consensus 158 ~~~kL~dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~ 234 (313)
T cd06633 158 GQVKLADFGSASKSSP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 234 (313)
T ss_pred CCEEEeecCCCcccCC---CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Confidence 7899999999865432 23457899999999874 3457889999999999999999999988776665555544
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
... +....+.++..+.+|+.+||+.+|.+||++.+++.||||+...
T Consensus 235 ~~~--~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 235 NDS--PTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred cCC--CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 322 2222345678899999999999999999999999999999743
No 259
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=3e-40 Score=337.48 Aligned_cols=268 Identities=24% Similarity=0.278 Sum_probs=205.2
Q ss_pred cceeeeeeecccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-C
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-D 169 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~ 169 (577)
++|++.+.||.|+||.||+|.+. .+++.||+|++..... ......+.+|+.++.++.+||||+++++++.. +
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT--ASEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC--HHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 57999999999999999999743 3457899998864321 23456678899999999669999999998764 5
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhH--------------------------------------------HHhh
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAW--------------------------------------------FLAI 205 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~--------------------------------------------~~~~ 205 (577)
..++++|||+++|+|.+.+............. ....
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 67899999999999998886432100000000 0000
Q ss_pred hcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCC---ccccccCCcc
Q 008127 206 RKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYY 282 (577)
Q Consensus 206 ~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y 282 (577)
.....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..+..... .....++..|
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~---~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y 241 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 241 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEe---CCCcEEEeccccchhcccCcchhhccCCCCCccc
Confidence 1124789999999999999999999999999999999999998 477899999999987543221 1234567789
Q ss_pred ccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCC
Q 008127 283 VAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA 360 (577)
Q Consensus 283 ~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~ 360 (577)
+|||++.+ .++.++|||||||++|+|++ |..||.+....+.+...+....... .....++++.+++.+||+.+|++
T Consensus 242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~~p~~ 319 (337)
T cd05054 242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMR--APEYATPEIYSIMLDCWHNNPED 319 (337)
T ss_pred cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCC--CCccCCHHHHHHHHHHccCChhh
Confidence 99997754 56889999999999999998 9999987655555544444322211 12356789999999999999999
Q ss_pred CCCHHHHhcC
Q 008127 361 RLTAAQALSH 370 (577)
Q Consensus 361 Rpt~~~il~h 370 (577)
||++.++++|
T Consensus 320 RPs~~ell~~ 329 (337)
T cd05054 320 RPTFSELVEI 329 (337)
T ss_pred CcCHHHHHHH
Confidence 9999999874
No 260
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=6.4e-40 Score=329.50 Aligned_cols=260 Identities=25% Similarity=0.359 Sum_probs=209.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
+.|++.+.||.|+||.||+|.+..+++.||||.+..... ......+..|+.++..+.+||||+++++++.....+|+|
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 92 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC 92 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC--hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence 468999999999999999999998899999999875432 223456677888777776799999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||++ ++|.+.+.. ....+++..+..++.||+.||.|||+ .||+||||+|+||+++ .++
T Consensus 93 ~e~~~-~~l~~l~~~----------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~---~~~ 152 (296)
T cd06618 93 MELMS-TCLDKLLKR----------------IQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLD---ASG 152 (296)
T ss_pred eeccC-cCHHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEc---CCC
Confidence 99985 456554322 13578999999999999999999997 6999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhcccC-----CCCCCchhhHHHHHHHHHhCCCCCCCCCh-hHHHHHHH
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-----SGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVL 328 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~DiwSlG~il~el~tg~~Pf~~~~~-~~~~~~i~ 328 (577)
.+||+|||++..+..........+++.|+|||.+.+. ++.++||||||+++|+|++|+.||..... .+.+..++
T Consensus 153 ~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 232 (296)
T cd06618 153 NVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKIL 232 (296)
T ss_pred CEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHh
Confidence 9999999999876544433445688899999988643 57899999999999999999999976432 34455554
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
....... .....++.++.+|+.+||..||.+||++.+++.||||+....
T Consensus 233 ~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 281 (296)
T cd06618 233 QEEPPSL-PPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYET 281 (296)
T ss_pred cCCCCCC-CCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccch
Confidence 4432211 111247889999999999999999999999999999987543
No 261
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=8.4e-40 Score=322.36 Aligned_cols=247 Identities=23% Similarity=0.371 Sum_probs=206.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.++||.|+||.||+|.+. ++..||+|.+.... ...+.+.+|+.+++.+ +||||+++++++...+..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT----MSVQAFLEEANLMKTL-QHDKLVRLYAVVTKEEPIYII 79 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc----hhHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCcEEE
Confidence 47999999999999999999864 56789999876543 2356789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++|+|.+++... ....++...+..++.|++.||.|||+.+++||||||+||+++ .++.
T Consensus 80 ~e~~~~~~L~~~l~~~---------------~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~---~~~~ 141 (261)
T cd05072 80 TEYMAKGSLLDFLKSD---------------EGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVS---ESLM 141 (261)
T ss_pred EecCCCCcHHHHHHHh---------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEec---CCCc
Confidence 9999999999877543 235678889999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCCC--ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+||+|||++........ .....++..|+|||++.+ .++.++|||||||++|+|++ |..||.+.........+....
T Consensus 142 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~ 221 (261)
T cd05072 142 CKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY 221 (261)
T ss_pred EEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC
Confidence 99999999987643221 123346678999998764 45889999999999999998 999998877777666665442
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
..+....++.++.+++.+||..+|++|||++++++
T Consensus 222 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 222 ---RMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred ---CCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 22233567899999999999999999999999864
No 262
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=6e-40 Score=329.88 Aligned_cols=266 Identities=23% Similarity=0.286 Sum_probs=207.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCC--EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGD--RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~--~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
++|++.+.||+|+||.||+|.+..++. .+|+|.+.... .....+.+.+|+.++.++.+||||+++++++...+.+|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA--SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC--CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 469999999999999999999877765 46888775321 23345678999999999966999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+||||+++|+|.+++.......... .+.........+++..++.++.||+.||.|||++||+||||||+|||++ .+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~ 155 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDP-AFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVG---EN 155 (297)
T ss_pred EEEEecCCCcHHHHHHhcccccccc-ccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEEC---CC
Confidence 9999999999999886532111000 0000001124588999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+.+||+|||++..............+..|+|||++.+ .++.++|||||||++|+|++ |..||.+....+....+....
T Consensus 156 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~ 235 (297)
T cd05089 156 LASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY 235 (297)
T ss_pred CeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC
Confidence 8899999999864322111112233557999998765 45889999999999999997 999999888877777665532
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
. ......++..+.+|+.+||..+|.+|||+.++++.
T Consensus 236 ~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 236 R---MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred C---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1 12224578999999999999999999999998753
No 263
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.7e-39 Score=320.79 Aligned_cols=254 Identities=28% Similarity=0.495 Sum_probs=209.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccc--cCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC--Ce
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNK--MILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NY 171 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~ 171 (577)
.+|++.+.||+|+||.||+|.+..+|+.||+|.+.... .........+.+|+.+++++ +||||+++++++.+. +.
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~ 80 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-RHDRIVQYYGCLRDPEEKK 80 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHc-CCCCcceEEEEEEcCCCCE
Confidence 36999999999999999999999999999999875321 11234567889999999999 599999999998753 56
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+++|+||+++++|.+++... ..+++..+..++.||+.||.|||+.|++|+||||+||+++
T Consensus 81 ~~~v~e~~~~~~L~~~~~~~-----------------~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~--- 140 (264)
T cd06653 81 LSIFVEYMPGGSIKDQLKAY-----------------GALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRD--- 140 (264)
T ss_pred EEEEEEeCCCCcHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---
Confidence 89999999999998876432 5578999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCC----CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~----~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
.++.++|+|||++...... .......|+..|+|||++.+. .+.++|||||||++|+|++|+.||..........+
T Consensus 141 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 220 (264)
T cd06653 141 SAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFK 220 (264)
T ss_pred CCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Confidence 4778999999999765321 122345789999999988654 58899999999999999999999987765555555
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
+..... ....++.+++.+.++|.+||. +|..|||+.+++.|||.
T Consensus 221 ~~~~~~--~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 221 IATQPT--KPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred HHcCCC--CCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 443221 122235688999999999999 58999999999999994
No 264
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.8e-40 Score=337.08 Aligned_cols=256 Identities=19% Similarity=0.300 Sum_probs=201.7
Q ss_pred eeeccc--CCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEecc
Q 008127 102 KLLGHG--QFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELC 179 (577)
Q Consensus 102 ~~lG~G--~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 179 (577)
..||.| +||+||+|.+..+|+.||+|++...... ....+.+.+|+.+++.+ +||||++++++|...+.+|+|+||+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~~~~~~v~e~~ 81 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT-EEHLKALQNEVVLSHFF-RHPNIMTSWTVFTTGSWLWVISPFM 81 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC-HHHHHHHHHHHHHHHhC-CCCCcceEeeeEecCCceEEEEecc
Confidence 356666 9999999999999999999998754332 33457889999999888 5999999999999999999999999
Q ss_pred CCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEE
Q 008127 180 EGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259 (577)
Q Consensus 180 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~ 259 (577)
.+++|.+.+... ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.++++
T Consensus 82 ~~~~l~~~l~~~---------------~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~---~~~~~~~~ 143 (328)
T cd08226 82 AYGSANSLLKTY---------------FPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILIS---GDGLVSLS 143 (328)
T ss_pred cCCCHHHHHHhh---------------cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEe---CCCcEEEe
Confidence 999998876443 124588999999999999999999999999999999999998 46789999
Q ss_pred ecCCCcccCCCCC--------ccccccCCccccchhcccC---CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 260 DFGLSDFIKPGKK--------FQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 260 DFGla~~~~~~~~--------~~~~~gt~~y~aPE~~~~~---~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
|||.+........ .....++..|+|||++.+. ++.++|||||||++|+|++|+.||.+..........+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~ 223 (328)
T cd08226 144 GLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKL 223 (328)
T ss_pred chHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHh
Confidence 9986533211100 0112356779999998653 5789999999999999999999998766555444443
Q ss_pred hCCCCCC-------------------------------------------CCCCCCCCHHHHHHHHHccccCcCCCCCHH
Q 008127 329 RNKPDFR-------------------------------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAA 365 (577)
Q Consensus 329 ~~~~~~~-------------------------------------------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~ 365 (577)
...+..+ ......+++.+.+||.+||+.||++|||+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~ 303 (328)
T cd08226 224 KGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSAS 303 (328)
T ss_pred cCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHH
Confidence 3221100 000123566799999999999999999999
Q ss_pred HHhcCccccccC
Q 008127 366 QALSHPWVREGG 377 (577)
Q Consensus 366 ~il~hp~f~~~~ 377 (577)
++|+||||+...
T Consensus 304 e~l~~~~~~~~~ 315 (328)
T cd08226 304 SLLSHAFFKQVK 315 (328)
T ss_pred HHhhCHHHHHHH
Confidence 999999998654
No 265
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3.9e-40 Score=328.13 Aligned_cols=262 Identities=22% Similarity=0.319 Sum_probs=211.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
++|.+.+.||+|+||.||+|.+.. +++.||||.+..... ......+.+|+++++.+ .||||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~ 81 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS--NDARKDFEREAELLTNF-QHENIVKFYGVCTEGD 81 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC--HHHHHHHHHHHHHHHhc-CCCCchheeeEEecCC
Confidence 468899999999999999998743 467899999865432 23457899999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
..++||||+++++|.+++.......... .........+++..+..++.||+.||.|||++|++||||||+||+++
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~-- 156 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFL---KSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVG-- 156 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhh---cccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEc--
Confidence 9999999999999999886542110000 00112345688999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
.++.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+...
T Consensus 157 -~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~ 235 (280)
T cd05049 157 -YDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIE 235 (280)
T ss_pred -CCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 478999999999976533221 123356788999998765 45889999999999999998 999998888877777
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+..+..... ...++..+.+++.+||..||.+|||+.++++
T Consensus 236 ~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 236 CITQGRLLQR---PRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred HHHcCCcCCC---CCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 7765543222 2457899999999999999999999999975
No 266
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.2e-39 Score=326.25 Aligned_cols=266 Identities=20% Similarity=0.282 Sum_probs=210.6
Q ss_pred ccceeeeeeecccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
.++|++.+.||+|+||.||+|.++. .+..||+|.+..... ......+.+|+.+++.+ +||||+++++++...
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~ 81 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS--LRERIEFLNEASVMKGF-TCHHVVRLLGVVSKG 81 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC--HHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCC
Confidence 3579999999999999999997652 355899998764432 22345678899999999 599999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
+..|+||||+++|+|.+++........ .......++...+..++.||+.||.|||+++|+||||||+|||++
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~- 153 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAE-------NNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA- 153 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccc-------cCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEc-
Confidence 999999999999999998864311000 001124467788899999999999999999999999999999998
Q ss_pred CCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 324 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~ 324 (577)
.++.+||+|||+++....... .....++..|+|||.+.+ .++.++|||||||++|+|++ |..||.+....+..
T Consensus 154 --~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~ 231 (288)
T cd05061 154 --HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 231 (288)
T ss_pred --CCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 478899999999876533221 112345678999998764 46889999999999999998 78999887777766
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc------Ccccccc
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS------HPWVREG 376 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~------hp~f~~~ 376 (577)
..+..+.... ....+++.+.+++.+||+.||++|||+.++++ ||||+..
T Consensus 232 ~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 232 KFVMDGGYLD---QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred HHHHcCCCCC---CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence 6665442211 12356789999999999999999999999987 9999764
No 267
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=8e-40 Score=326.58 Aligned_cols=266 Identities=18% Similarity=0.261 Sum_probs=208.5
Q ss_pred cceeeeeeecccCCeEEEEEEEc----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
..|++.+.||+|+||.||+|.+. .++..||+|.+.... .......+.+|+.+++.+ +||||+++++++.....
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 81 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAEL-HHPNIVCLLGVVTQEQP 81 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEecCCc
Confidence 35899999999999999999853 456789999986432 233456788999999999 59999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.|+||||+++++|.+++......................+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~--- 158 (283)
T cd05090 82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG--- 158 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEc---
Confidence 99999999999999987543211100000000001124578899999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCC---CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
.++.+||+|||++....... ......++..|+|||++.+ .++.++|||||||++|+|++ |..||.+.....+...
T Consensus 159 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05090 159 EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEM 238 (283)
T ss_pred CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 46789999999997654322 1233456778999998764 46889999999999999998 9999988777666665
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
+..... . ..+..+++.+.+++.+||+.||.+||++.+++++
T Consensus 239 ~~~~~~-~--~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 239 VRKRQL-L--PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred HHcCCc-C--CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 554332 1 2234678999999999999999999999998764
No 268
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=3e-40 Score=338.80 Aligned_cols=260 Identities=30% Similarity=0.501 Sum_probs=212.8
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe--
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY-- 171 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~-- 171 (577)
+.++|++.+.||.|+||.||+|++..+++.||||++..... .......+.+|+.+++.+ .||||+++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQ-SAIHAKRTYRELRLLKHM-DHENVIGLLDVFTPASSLE 90 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccc-hhhHHHHHHHHHHHHHhc-cCCCHHHHHHHhhcccccc
Confidence 45689999999999999999999999999999998865322 123446678899999999 59999999988876554
Q ss_pred ----EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 172 ----VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 172 ----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
+|+|+||+ +++|.+.+. ...+++..++.++.||+.||.|||+.||+||||||+||++
T Consensus 91 ~~~~~~lv~e~~-~~~L~~~~~------------------~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill 151 (343)
T cd07851 91 DFQDVYLVTHLM-GADLNNIVK------------------CQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV 151 (343)
T ss_pred ccccEEEEEecC-CCCHHHHHh------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE
Confidence 89999999 678877552 2568999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
+ .++.+||+|||++...... .....+|..|+|||.+.+ .++.++|||||||++|+|++|+.||.+....+.+.
T Consensus 152 ~---~~~~~kL~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~ 226 (343)
T cd07851 152 N---EDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLK 226 (343)
T ss_pred C---CCCCEEEcccccccccccc--ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 8 4788999999999865432 345578999999998754 45789999999999999999999998777666655
Q ss_pred HHHhCCCCC-----------------------CC----CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 326 EVLRNKPDF-----------------------RR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 326 ~i~~~~~~~-----------------------~~----~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.++...... .. ..+..+++.+.+||.+||..+|.+|||+.++++||||+....
T Consensus 227 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~ 306 (343)
T cd07851 227 RIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHD 306 (343)
T ss_pred HHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCC
Confidence 554321110 00 011346889999999999999999999999999999997654
Q ss_pred C
Q 008127 379 A 379 (577)
Q Consensus 379 ~ 379 (577)
.
T Consensus 307 ~ 307 (343)
T cd07851 307 P 307 (343)
T ss_pred C
Confidence 4
No 269
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-42 Score=314.73 Aligned_cols=261 Identities=28% Similarity=0.466 Sum_probs=212.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-------
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED------- 168 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~------- 168 (577)
..|+-..+||+|.||+||+|+.+.+|+.||+|++-..... .-......+|+.+|..|. |+|++.+++.|..
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneK-eGfpitalreikiL~~lk-Henv~nliEic~tk~Tp~~r 94 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEK-EGFPITALREIKILQLLK-HENVVNLIEICRTKATPTNR 94 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccc-cCCcHHHHHHHHHHHHhc-chhHHHHHHHHhhccCCccc
Confidence 3678888999999999999999999999999876432211 112344578999999995 9999999988742
Q ss_pred -CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 169 -DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 169 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
...+|+|+.+|+. +|...|.. ...+++..++..++.+++.||.|+|...|+|||+||+|+|+
T Consensus 95 ~r~t~ylVf~~ceh-DLaGlLsn----------------~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLI 157 (376)
T KOG0669|consen 95 DRATFYLVFDFCEH-DLAGLLSN----------------RKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLI 157 (376)
T ss_pred ccceeeeeHHHhhh-hHHHHhcC----------------ccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEE
Confidence 3469999999964 66654421 23679999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCC-----CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCCh
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPG-----KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTE 320 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~ 320 (577)
+ .++.+||+|||+|+.+... ..+...+-|.+|++||.+.| .++++.|||+.|||+.||.||.+.+.+.++
T Consensus 158 t---~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnte 234 (376)
T KOG0669|consen 158 T---KDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTE 234 (376)
T ss_pred c---CCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChH
Confidence 8 5899999999999765322 33566788999999998765 579999999999999999999999999998
Q ss_pred hHHHHHHHhCCCCCCCCCCCCC-------------------------------CHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 321 DGIFKEVLRNKPDFRRKPWPSI-------------------------------SNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~~~~~~~-------------------------------s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
...+..|..-...+....||++ .+++.+|+.+||..||.+||+++++|.
T Consensus 235 qqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 235 QQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred HHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 8877766544444444444431 236789999999999999999999999
Q ss_pred CccccccCC
Q 008127 370 HPWVREGGD 378 (577)
Q Consensus 370 hp~f~~~~~ 378 (577)
|.||.....
T Consensus 315 h~~F~kdp~ 323 (376)
T KOG0669|consen 315 HDFFWKDPM 323 (376)
T ss_pred hhhhhcCCc
Confidence 999987653
No 270
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.2e-39 Score=326.31 Aligned_cols=260 Identities=23% Similarity=0.349 Sum_probs=208.6
Q ss_pred cceeeeeeecccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
..|.+.+.||.|+||.||++.+. .++..+|+|.+.... ......+.+|+.+++++ +||||+++++++...+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 80 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNL-QHEHIVKFYGVCVEGD 80 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC---HHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCC
Confidence 46899999999999999999852 345679999886542 33566789999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+++||||+++++|.+++......... .........+++..++.++.||+.||.|||++|++||||||+|||++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~-- 154 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVL----MAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG-- 154 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCcccc----ccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc--
Confidence 999999999999999887543111000 00011224589999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
.++.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||......+...
T Consensus 155 -~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~ 233 (288)
T cd05093 155 -ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIE 233 (288)
T ss_pred -cCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 478899999999986543221 123345778999998875 45889999999999999998 999998888777777
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+..+.... ....+++++.+|+.+||+.||.+|||+.+++.
T Consensus 234 ~i~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 234 CITQGRVLQ---RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred HHHcCCcCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 776654321 12357889999999999999999999999854
No 271
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.9e-39 Score=318.58 Aligned_cols=256 Identities=30% Similarity=0.533 Sum_probs=218.0
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|.+.+.||.|+||.||++.+..++..||+|++..... .......+.+|+++++.+. |||++++++.+...+..++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~lv~ 78 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLN-HPNIIKYYESFEEKGKLCIVM 78 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcC-CCChhheEEEEecCCEEEEEE
Confidence 48899999999999999999999999999999876543 2345677889999999995 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+++.... .....+++..+..++.+++.||.|||++|++|+||+|+||+++ .++.+
T Consensus 79 e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~---~~~~~ 142 (258)
T cd08215 79 EYADGGDLSQKIKKQK-------------KEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLT---SNGLV 142 (258)
T ss_pred EecCCCcHHHHHHHhh-------------ccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEc---CCCcE
Confidence 9999999998775431 1246789999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCC-CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+|+|||++....... ......|++.|+|||.+.+. ++.++|+||+|+++|+|++|..||......+............
T Consensus 143 ~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 222 (258)
T cd08215 143 KLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPP 222 (258)
T ss_pred EECCccceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCC
Confidence 999999997664432 23345789999999987654 5889999999999999999999998887777776665543221
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
....++..+.+++.+||..+|.+|||+.++|+||||
T Consensus 223 ---~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 223 ---IPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred ---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 123578899999999999999999999999999997
No 272
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=9.2e-40 Score=360.81 Aligned_cols=149 Identities=31% Similarity=0.495 Sum_probs=133.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|.++++||.|+||.||+|.+..+++.||||++.............+..|+.++..+ +||||+++++++...+.+|||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALS-KSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhc-CCCCcCeEEEEEEECCEEEEE
Confidence 4799999999999999999999999999999999766554455567889999999988 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++|++|.+++.. ...+++..++.++.||+.||.|||.++||||||||+|||++ .++.
T Consensus 83 mEy~~g~~L~~li~~-----------------~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~---~~g~ 142 (669)
T cd05610 83 MEYLIGGDVKSLLHI-----------------YGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLIS---NEGH 142 (669)
T ss_pred EeCCCCCCHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEc---CCCC
Confidence 999999999887643 25688899999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCc
Q 008127 256 LKATDFGLSD 265 (577)
Q Consensus 256 vkl~DFGla~ 265 (577)
+||+|||+++
T Consensus 143 vkL~DFGls~ 152 (669)
T cd05610 143 IKLTDFGLSK 152 (669)
T ss_pred EEEEeCCCCc
Confidence 9999999875
No 273
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=9.6e-40 Score=324.97 Aligned_cols=260 Identities=19% Similarity=0.287 Sum_probs=206.6
Q ss_pred ccceeeeeeecccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
.++|++.+.||+|+||.||+|.+. .++..||||.+..... ......+.+|+.+++.+ +||||+++++++...
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~ 81 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS--MRERIEFLNEASVMKEF-NCHHVVRLLGVVSQG 81 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCC--HHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCC
Confidence 457999999999999999999864 2456899998854321 23456688999999999 599999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
+..++||||+++|+|.+++........ .......++...+..++.|++.||.|||+.|++||||||+|||++
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~- 153 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEME-------NNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA- 153 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCcccc-------ccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEc-
Confidence 999999999999999988754310000 000123467888999999999999999999999999999999998
Q ss_pred CCCCCCeeEEecCCCcccCCCCCc---cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 324 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~ 324 (577)
.++.+||+|||++......... ....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+..
T Consensus 154 --~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~ 231 (277)
T cd05062 154 --EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVL 231 (277)
T ss_pred --CCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 4788999999998765432221 12345788999998765 45889999999999999999 78999888777776
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
..+....... ....++..+.+++.+||+.||.+|||+.+++++
T Consensus 232 ~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 232 RFVMEGGLLD---KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred HHHHcCCcCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 6665543221 124577899999999999999999999999864
No 274
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.1e-39 Score=320.42 Aligned_cols=255 Identities=27% Similarity=0.467 Sum_probs=209.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||.|+||.||+|.+..+|+.||+|.+...........+.+.+|+.+++++ +||||+++++++...+..++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~-~~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-DHPNVIKYLASFIENNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCeeeeeeeeecCCeEEEE
Confidence 4799999999999999999999999999999998754444444567899999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++|+|.+++... ......+++..++.++.||+.||.|||+.||+||||+|+||+++ .++.
T Consensus 81 ~e~~~~~~L~~~l~~~-------------~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~---~~~~ 144 (267)
T cd08224 81 LELADAGDLSRMIKHF-------------KKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFIT---ATGV 144 (267)
T ss_pred EecCCCCCHHHHHHHh-------------cccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEEC---CCCc
Confidence 9999999998876432 11235689999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCC-CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCCh--hHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~--~~~~~~i~~~~ 331 (577)
++|+|||++....... ......|++.|+|||.+.+ .++.++|||||||++|+|++|+.||..... ......+..+.
T Consensus 145 ~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 224 (267)
T cd08224 145 VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCD 224 (267)
T ss_pred EEEeccceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCC
Confidence 9999999987654322 1234578999999998765 468899999999999999999999965432 23333333322
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+...+.+.++..+.++|.+||..+|.+|||+.++++
T Consensus 225 --~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 225 --YPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred --CCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 122222357789999999999999999999998875
No 275
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=7.5e-40 Score=332.12 Aligned_cols=249 Identities=22% Similarity=0.301 Sum_probs=202.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCE----EEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~----vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
.+|++.+.||+|+||.||+|.+..++.. ||+|.+.... .......+.+|+.+++.+ +||||+++++++... .
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~g~~~~~-~ 82 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-T 82 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEcCC-C
Confidence 3699999999999999999998766654 8999886432 234567788999999999 599999999998765 4
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.++|+||+++|+|.+++... ...++...+..++.||+.||.|||++||+||||||+|||++
T Consensus 83 ~~~v~e~~~~g~l~~~l~~~----------------~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~--- 143 (316)
T cd05108 83 VQLITQLMPFGCLLDYVREH----------------KDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVK--- 143 (316)
T ss_pred ceeeeecCCCCCHHHHHHhc----------------cccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEec---
Confidence 77999999999999877543 24578889999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCCCc---cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
.++.+||+|||+++........ ....++..|+|||++.+ .++.++|||||||++|+|++ |..||.+....+.. .
T Consensus 144 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~-~ 222 (316)
T cd05108 144 TPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-S 222 (316)
T ss_pred CCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH-H
Confidence 4778999999999876543321 22334678999998764 46889999999999999997 99999876655543 4
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
++......+. .+.++..+.+++.+||..+|.+|||+.+++.+
T Consensus 223 ~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 223 ILEKGERLPQ--PPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred HHhCCCCCCC--CCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 4443333222 24577899999999999999999999999986
No 276
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1e-39 Score=329.87 Aligned_cols=258 Identities=28% Similarity=0.450 Sum_probs=213.3
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
....|...+.||.|+||.||+|+++.++..||+|.+.............+.+|+.+++.+ +|||++++++++......|
T Consensus 13 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~ 91 (308)
T cd06634 13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAW 91 (308)
T ss_pred cHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCeeE
Confidence 445688899999999999999999999999999998654333334456788999999999 5999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+||||+. |+|.+.+.. ....+++..++.++.|++.||.|||+.+++||||||+|||++ .+
T Consensus 92 lv~e~~~-~~l~~~~~~----------------~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~---~~ 151 (308)
T cd06634 92 LVMEYCL-GSASDLLEV----------------HKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EP 151 (308)
T ss_pred EEEEccC-CCHHHHHHH----------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEEC---CC
Confidence 9999996 577765532 235688999999999999999999999999999999999998 46
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccccchhcc----cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
+.+||+|||++...... ....|++.|+|||.+. +..+.++|||||||++|+|++|..||......+....+..
T Consensus 152 ~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 228 (308)
T cd06634 152 GLVKLGDFGSASIMAPA---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 228 (308)
T ss_pred CcEEECCcccceeecCc---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhh
Confidence 88999999998765432 2456889999999874 3457899999999999999999999987766555555544
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
... +......++..+.+||.+||..+|.+||++.++++|||+....
T Consensus 229 ~~~--~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~ 274 (308)
T cd06634 229 NES--PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274 (308)
T ss_pred cCC--CCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccC
Confidence 322 1111235778899999999999999999999999999998753
No 277
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.7e-40 Score=337.54 Aligned_cols=260 Identities=32% Similarity=0.483 Sum_probs=214.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC-----e
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-----Y 171 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-----~ 171 (577)
+|++.+.||.|+||.||+|++..+|+.||||.+..... .....+.+.+|+.+++.+ +||||+++++++.... .
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~~ 78 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD-DLIDAKRILREIKLLRHL-RHENIIGLLDILRPPSPEDFND 78 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc-cchhhhhHHHHHHHHHhc-CCcchhhhhhhhcccCcccccc
Confidence 58999999999999999999998999999999865421 133456788999999999 5999999999988765 7
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+||||++ ++|.+.+. ....+++..++.++.||+.||.|||+.||+||||||+|||++
T Consensus 79 ~~lv~e~~~-~~l~~~l~-----------------~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~--- 137 (330)
T cd07834 79 VYIVTELME-TDLHKVIK-----------------SPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVN--- 137 (330)
T ss_pred eEEEecchh-hhHHHHHh-----------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---
Confidence 999999997 46766553 235789999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCC----CccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
.++.++|+|||++....... ......+|+.|+|||++.+. ++.++|||||||++|+|++|.+||.+.+..+.+.
T Consensus 138 ~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~ 217 (330)
T cd07834 138 SNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLN 217 (330)
T ss_pred CCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHH
Confidence 46899999999998765432 23455789999999988654 5889999999999999999999998887776666
Q ss_pred HHHhCCCCCCCC---------------------------CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 326 EVLRNKPDFRRK---------------------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 326 ~i~~~~~~~~~~---------------------------~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.+.......... ..+.++..+.+||.+||+++|.+|||+.+++.||||+....
T Consensus 218 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 218 LIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred HHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 655422111100 12346788999999999999999999999999999987554
Q ss_pred C
Q 008127 379 A 379 (577)
Q Consensus 379 ~ 379 (577)
.
T Consensus 298 ~ 298 (330)
T cd07834 298 P 298 (330)
T ss_pred c
Confidence 3
No 278
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=2.6e-39 Score=317.60 Aligned_cols=253 Identities=32% Similarity=0.545 Sum_probs=212.5
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC--CeEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NYVYI 174 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~~l 174 (577)
+|.+.+.||+|++|.||+|.+..+++.|++|++...... ....+.+.+|+.+++++. ||||+++++.+... ..+++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~l 78 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSLQ-HPNIVRYYGSERDEEKNTLNI 78 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcC-CCCEeeEEEEEecCCCCeEEE
Confidence 478889999999999999999989999999998765432 345778999999999995 99999999999988 89999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|+||+++++|.+++... ..+++..++.++.|++.||.|||+.|++|+||+|+||+++. ++
T Consensus 79 v~e~~~~~~L~~~~~~~-----------------~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~---~~ 138 (260)
T cd06606 79 FLEYVSGGSLSSLLKKF-----------------GKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDS---DG 138 (260)
T ss_pred EEEecCCCcHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcC---CC
Confidence 99999999998876432 47899999999999999999999999999999999999984 78
Q ss_pred CeeEEecCCCcccCCCCC---ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCC-hhHHHHHHHh
Q 008127 255 SLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT-EDGIFKEVLR 329 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~-~~~~~~~i~~ 329 (577)
.++|+|||.+........ .....++..|+|||.+.+. .+.++||||||+++|+|++|..||.... .......+..
T Consensus 139 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 218 (260)
T cd06606 139 VVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS 218 (260)
T ss_pred CEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccc
Confidence 899999999987655442 3456789999999988755 6889999999999999999999997765 2222222322
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.. . .......++..+.+||.+||..+|.+||++.+++.||||
T Consensus 219 ~~-~-~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 219 SG-E-PPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred cC-C-CcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 11 1 112224568899999999999999999999999999997
No 279
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.5e-39 Score=327.61 Aligned_cols=252 Identities=26% Similarity=0.342 Sum_probs=205.9
Q ss_pred cceeeeeeecccCCeEEEEEEE-----cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~-----~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
++|.+.+.||+|+||.||+|.+ ..++..||||.+..... ....+.+.+|+.+++++.+||||+++++++...+
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH--SSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC--hHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 4799999999999999999975 23456899998865432 3345678999999999966999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+|+||||+++|+|.+++... ....+++..+..++.||+.||.|||+++|+|+||||+|||++
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~---------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~-- 175 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRK---------------RESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLT-- 175 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhC---------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEc--
Confidence 999999999999999877432 123489999999999999999999999999999999999997
Q ss_pred CCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
.++.+||+|||++........ .....+++.|+|||.+.+ .++.++|||||||++|+|++ |..||.+....+.+.
T Consensus 176 -~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~ 254 (302)
T cd05055 176 -HGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFY 254 (302)
T ss_pred -CCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHH
Confidence 477899999999986543221 122346788999998764 45889999999999999998 999998877665555
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
......... ......++.+.+|+.+||..+|++|||+.++++
T Consensus 255 ~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 255 KLIKEGYRM--AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred HHHHcCCcC--CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 554433221 222457889999999999999999999999975
No 280
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=6.6e-40 Score=336.16 Aligned_cols=258 Identities=33% Similarity=0.522 Sum_probs=207.8
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC-----
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD----- 169 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~----- 169 (577)
..+|.+.+.||+|+||.||+|.+..+|+.||||.+.+... .......+.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 91 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHM-QHENVIGLLDVFTSAVSGDE 91 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-cccchhHHHHHHHHHHhc-CCCCccchhheecccccCCC
Confidence 3579999999999999999999999999999999865422 122345678999999999 599999999998754
Q ss_pred -CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 170 -NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 170 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
..+|+|+||+. .+|...+ ...+++..+..++.|++.||.|||+.||+||||||+|||++
T Consensus 92 ~~~~~lv~e~~~-~~l~~~~-------------------~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~ 151 (342)
T cd07879 92 FQDFYLVMPYMQ-TDLQKIM-------------------GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVN 151 (342)
T ss_pred CceEEEEecccc-cCHHHHH-------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC
Confidence 35699999985 3554322 24688999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
.++.+||+|||++..... ......+|+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+....+..
T Consensus 152 ---~~~~~kL~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~ 226 (342)
T cd07879 152 ---EDCELKILDFGLARHADA--EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQ 226 (342)
T ss_pred ---CCCCEEEeeCCCCcCCCC--CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 478899999999876532 2334578999999998764 358899999999999999999999988765555544
Q ss_pred HHhCC-----------------------CCCCCC----CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCC
Q 008127 327 VLRNK-----------------------PDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379 (577)
Q Consensus 327 i~~~~-----------------------~~~~~~----~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~ 379 (577)
++... +..+.. .++..++.+.+||.+||+.||.+||++.+++.||||+.....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 227 ILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred HHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence 43311 111111 124577889999999999999999999999999999987554
No 281
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.6e-39 Score=325.00 Aligned_cols=261 Identities=33% Similarity=0.533 Sum_probs=218.3
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
+..+.|++.+.||.|+||.||+|.+..++..||+|++..... ....+.+|+++++.+ +||||+++++++...+..
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~ 90 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDC-KHPNIVDYYDSYLVGDEL 90 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHC-CCCCeeEEEEEEEECCEE
Confidence 345579999999999999999999998999999999875432 456788999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+|+||+++++|.+++... ...++...+..++.|++.||.|||+.||+|+||+|+||+++ .
T Consensus 91 ~lv~e~~~~~~L~~~l~~~----------------~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~---~ 151 (286)
T cd06614 91 WVVMEYMDGGSLTDIITQN----------------FVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLS---K 151 (286)
T ss_pred EEEEeccCCCcHHHHHHHh----------------ccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEc---C
Confidence 9999999999999877543 13789999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCCC-CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 253 DSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
++.++|+|||++....... ......+++.|+|||.+.+. ++.++|+|||||++|+|++|..||...........+...
T Consensus 152 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~ 231 (286)
T cd06614 152 DGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTK 231 (286)
T ss_pred CCCEEECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Confidence 7789999999986554321 22344688999999987654 588999999999999999999999877766555555443
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
... .......++..+.+||.+||+.+|.+|||+.+++.||||+..+.
T Consensus 232 ~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 278 (286)
T cd06614 232 GIP-PLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACP 278 (286)
T ss_pred CCC-CCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccCc
Confidence 321 11122347889999999999999999999999999999998654
No 282
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=9.5e-40 Score=327.38 Aligned_cols=257 Identities=33% Similarity=0.579 Sum_probs=212.9
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
|....+||.|+||.||++.+..+|..||||.+.... ......+.+|+.+++.+ +||||+++++.+...+..|+|||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 97 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVME 97 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc---hhHHHHHHHHHHHHHhc-CCcchhheeeEEEeCCEEEEEEe
Confidence 444567999999999999999999999999875432 23456788999999999 59999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
|+++++|.+.+. ...+++..++.++.|++.||.|||+.|++||||+|+||+++ .++.++
T Consensus 98 ~~~~~~L~~~~~------------------~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~---~~~~~~ 156 (292)
T cd06657 98 FLEGGALTDIVT------------------HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLT---HDGRVK 156 (292)
T ss_pred cCCCCcHHHHHh------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEE
Confidence 999999977542 24578999999999999999999999999999999999998 477899
Q ss_pred EEecCCCcccCCCC-CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008127 258 ATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335 (577)
Q Consensus 258 l~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~ 335 (577)
|+|||++....... ......|++.|+|||.+.+ .++.++|+||+||++|+|++|..||.+....+....+....+..
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~- 235 (292)
T cd06657 157 LSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPK- 235 (292)
T ss_pred EcccccceecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcc-
Confidence 99999987654322 2234578999999998764 45889999999999999999999998776665555544332221
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCC
Q 008127 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 380 (577)
Q Consensus 336 ~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~ 380 (577)
......+++.+.+++.+||..+|.+||++.+++.||||.......
T Consensus 236 ~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~~~ 280 (292)
T cd06657 236 LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPS 280 (292)
T ss_pred cCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCCCc
Confidence 112345788999999999999999999999999999999877533
No 283
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=9.7e-40 Score=329.10 Aligned_cols=257 Identities=28% Similarity=0.466 Sum_probs=206.5
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC----
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN---- 170 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~---- 170 (577)
.++|++.+.||.|+||.||+|.++.+|+.||||.+...... ......+.+|+.+++++ +||||+++++++.+..
T Consensus 6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~~~e~~~~~~l-~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK-EGFPITAIREIKILRQL-NHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccc-cCchHHHHHHHHHHHhC-CCCCeeeeeheecCcchhhh
Confidence 35799999999999999999999999999999998654321 22345677899999999 5999999999987654
Q ss_pred ------eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCc
Q 008127 171 ------YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 244 (577)
Q Consensus 171 ------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~N 244 (577)
.+|+|+||+++ +|.+.+.. ....+++..++.++.||+.||.|||+.||+||||||+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~----------------~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~n 146 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLES----------------GLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSN 146 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhc----------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence 89999999975 66655432 13468999999999999999999999999999999999
Q ss_pred EEeecCCCCCCeeEEecCCCcccCCCC--CccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCCh
Q 008127 245 FLFKSAKEDSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTE 320 (577)
Q Consensus 245 ILl~~~~~~~~vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~ 320 (577)
|+++ .++.+||+|||++....... ......++..|+|||.+.+. .+.++|||||||++|+|++|++||.....
T Consensus 147 ili~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~ 223 (302)
T cd07864 147 ILLN---NKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE 223 (302)
T ss_pred EEEC---CCCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 9998 47889999999998664332 12234568889999987543 47899999999999999999999987766
Q ss_pred hHHHHHHHhCCCCCCC--------------------------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 321 DGIFKEVLRNKPDFRR--------------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~--------------------------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.+.+..+......... ..+..++..+.++|.+||..||.+|||+.+++.||||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 224 LAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred HHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 5555444332110000 1123578899999999999999999999999999997
No 284
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1e-39 Score=334.99 Aligned_cols=261 Identities=31% Similarity=0.481 Sum_probs=208.9
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 169 (577)
+.++|.+.+.||+|+||.||+|.+..+|+.||+|++.+... .....+.+.+|+.+++++ +||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l-~h~~iv~~~~~~~~~~~~~ 92 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLE 92 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch-hhHHHHHHHHHHHHHHHc-CCCcccceeeeeeeccccc
Confidence 45689999999999999999999999999999999865422 122346678899999999 599999999988643
Q ss_pred --CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 170 --NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
...|++++++ +++|.+.+. ...+++..++.++.||+.||.|||++||+||||||+||++
T Consensus 93 ~~~~~~lv~~~~-~~~L~~~~~------------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll 153 (345)
T cd07877 93 EFNDVYLVTHLM-GADLNNIVK------------------CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 153 (345)
T ss_pred ccccEEEEehhc-ccCHHHHHh------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEE
Confidence 3578899887 778866442 2458999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
+ .++.+||+|||++..... ......||+.|+|||.+.+ .++.++|||||||++|+|++|+.||........+.
T Consensus 154 ~---~~~~~kl~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~ 228 (345)
T cd07877 154 N---EDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 228 (345)
T ss_pred c---CCCCEEEecccccccccc--cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 8 477899999999876532 3345678999999998755 35789999999999999999999997766554444
Q ss_pred HHHhCCC-----------------------CCCCC----CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 326 EVLRNKP-----------------------DFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 326 ~i~~~~~-----------------------~~~~~----~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.+..... ..+.. .+...++.+.+||.+||+.||.+|||+.+++.||||+....
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~ 308 (345)
T cd07877 229 LILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 308 (345)
T ss_pred HHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCC
Confidence 3322110 00110 11235788999999999999999999999999999997655
Q ss_pred CC
Q 008127 379 AS 380 (577)
Q Consensus 379 ~~ 380 (577)
..
T Consensus 309 ~~ 310 (345)
T cd07877 309 PD 310 (345)
T ss_pred CC
Confidence 43
No 285
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.6e-39 Score=319.57 Aligned_cols=247 Identities=24% Similarity=0.363 Sum_probs=205.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|.+.. +..+|||.+..... ..+.+.+|+.+++.+ +||||+++++++.....+|+|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKL-SHEKLVQLYGVCTKQRPIYIV 77 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcC-CCCCeeeEEEEEccCCCcEEE
Confidence 368999999999999999997653 45699998865432 345688999999999 599999999999998899999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++|+|.+++... ...+++..++.++.||+.||.|||+.|++|+||||+||+++ .++.
T Consensus 78 ~e~~~~~~l~~~i~~~----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~---~~~~ 138 (256)
T cd05113 78 TEYMSNGCLLNYLREH----------------GKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVD---DQGC 138 (256)
T ss_pred EEcCCCCcHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---CCCC
Confidence 9999999998876432 23689999999999999999999999999999999999998 4778
Q ss_pred eeEEecCCCcccCCCCCc--cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+||+|||++......... ....++..|+|||.+.+ .++.++|||||||++|+|++ |..||......+....+....
T Consensus 139 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~ 218 (256)
T cd05113 139 VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGL 218 (256)
T ss_pred EEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCC
Confidence 999999998765433211 12345678999998864 56889999999999999998 999998877777777776654
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
.... ....+..+.+++.+||..+|.+|||+.+++.+
T Consensus 219 ~~~~---~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 219 RLYR---PHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred CCCC---CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 3322 23467899999999999999999999999864
No 286
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.2e-39 Score=332.90 Aligned_cols=259 Identities=29% Similarity=0.430 Sum_probs=205.4
Q ss_pred ceeeeeeecccCCeEEEEEEEcCC--CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc----CC
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKAN--GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----DN 170 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~--~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----~~ 170 (577)
+|++.+.||+|+||.||+|.+..+ +..||||.+..... .......+.+|+.+++++.+||||+++++.+.. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFS-KKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 488999999999999999999888 89999998864321 122356678899999999779999999986532 24
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+|+++||+. ++|.+.+. ....+++..++.++.||+.||.|||+.||+||||||+||+++
T Consensus 80 ~~~~~~e~~~-~~L~~~l~-----------------~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~-- 139 (332)
T cd07857 80 ELYLYEELME-ADLHQIIR-----------------SGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVN-- 139 (332)
T ss_pred cEEEEEeccc-CCHHHHHh-----------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEc--
Confidence 6889999985 67876553 236789999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCC-----CccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 323 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~ 323 (577)
.++.+||+|||++....... ......||+.|+|||.+.+ .++.++|||||||++|+|++|.+||.+......
T Consensus 140 -~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~ 218 (332)
T cd07857 140 -ADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQ 218 (332)
T ss_pred -CCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHH
Confidence 47889999999997654321 1234579999999998754 358899999999999999999999977654444
Q ss_pred HHHHHhCCC-----------------------CCC----CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 324 FKEVLRNKP-----------------------DFR----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 324 ~~~i~~~~~-----------------------~~~----~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
+..++.... ..+ ...++.++..+.+|+.+||+.||.+|||+.+++.||||+..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~ 298 (332)
T cd07857 219 LNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIW 298 (332)
T ss_pred HHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence 333222100 000 11234567899999999999999999999999999999754
Q ss_pred C
Q 008127 377 G 377 (577)
Q Consensus 377 ~ 377 (577)
.
T Consensus 299 ~ 299 (332)
T cd07857 299 H 299 (332)
T ss_pred c
Confidence 3
No 287
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-42 Score=372.45 Aligned_cols=256 Identities=33% Similarity=0.562 Sum_probs=214.9
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.-++.-...||.|.||.||-|.+..+|...|+|.|...... ......+.+|+.++..+ +|||+|++|++-...+.++|
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~l-nHpNlV~YyGVEvHRekv~I 1311 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGL-NHPNLVRYYGVEVHREKVYI 1311 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhc-cCccccccCceeecHHHHHH
Confidence 34667778899999999999999999999999988654433 34567788999999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
.||||.||+|.+.+... +...+.....+..|++.|+.|||++|||||||||+||+|+ .+|
T Consensus 1312 FMEyC~~GsLa~ll~~g-----------------ri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld---~~g 1371 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEHG-----------------RIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLD---FNG 1371 (1509)
T ss_pred HHHHhccCcHHHHHHhc-----------------chhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeee---cCC
Confidence 99999999999866432 4466777788999999999999999999999999999999 478
Q ss_pred CeeEEecCCCcccCCCC-----CccccccCCccccchhcccCC----CCCCchhhHHHHHHHHHhCCCCCCCCC-hhHHH
Q 008127 255 SLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKT-EDGIF 324 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~----~~~~DiwSlG~il~el~tg~~Pf~~~~-~~~~~ 324 (577)
.+|++|||.|..+..+. ..+..+||+.|||||++.+.. ..+.||||||||+.||+||+.||...+ +-.++
T Consensus 1372 ~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIM 1451 (1509)
T KOG4645|consen 1372 LIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIM 1451 (1509)
T ss_pred cEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHH
Confidence 99999999998876542 245678999999999997532 678999999999999999999996543 33445
Q ss_pred HHHHhC-CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 325 KEVLRN-KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 325 ~~i~~~-~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
..+-.+ .|.++ ..+|.+.++||..||..||+.|.++.|+|+|.|-+..
T Consensus 1452 y~V~~gh~Pq~P----~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~ 1500 (1509)
T KOG4645|consen 1452 YHVAAGHKPQIP----ERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSC 1500 (1509)
T ss_pred hHHhccCCCCCc----hhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccc
Confidence 555443 33333 3489999999999999999999999999999997653
No 288
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=8.8e-40 Score=326.15 Aligned_cols=255 Identities=33% Similarity=0.519 Sum_probs=208.9
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
|.+.+.||.|+||.||+|++..+++.||||.+...... .......+|+..++++.+||||+++++++..++..|+|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 67889999999999999999889999999998654321 1223456799999999559999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
|+ +|+|.+.+... ....+++..++.++.|++.+|.|||++|++|+||+|+||+++ .++.++
T Consensus 79 ~~-~~~l~~~~~~~---------------~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~---~~~~~~ 139 (283)
T cd07830 79 YM-EGNLYQLMKDR---------------KGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVS---GPEVVK 139 (283)
T ss_pred cC-CCCHHHHHHhc---------------ccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc---CCCCEE
Confidence 99 88998876543 124689999999999999999999999999999999999998 478999
Q ss_pred EEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008127 258 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335 (577)
Q Consensus 258 l~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~ 335 (577)
|+|||++.............|+..|+|||++.+ .++.++|+||||+++++|++|++||......+.+..+........
T Consensus 140 l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~ 219 (283)
T cd07830 140 IADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPT 219 (283)
T ss_pred EeecccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCC
Confidence 999999987765545556678999999998753 358899999999999999999999987766555544432111000
Q ss_pred --------------------------CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 336 --------------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 336 --------------------------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
....+..+..+.+||.+||..+|.+|||+.+++.||||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 220 KQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred hhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 00112346789999999999999999999999999997
No 289
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=4.6e-39 Score=314.48 Aligned_cols=251 Identities=33% Similarity=0.570 Sum_probs=211.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
.|.+.+.||.|++|.||++.+..+++.||+|++..... .....+.+|+.+++.+. ||||+++++.+......++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~l~~ 76 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCK-HPNIVKYYGSYLKKDELWIVM 76 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCCeEEEEE
Confidence 37888999999999999999998999999999876532 35677899999999995 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+.+... ...+++..++.++.|++.||.|||.+|++||||+|+||+++ .++.+
T Consensus 77 e~~~~~~L~~~~~~~----------------~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~ 137 (253)
T cd05122 77 EFCSGGSLKDLLKST----------------NQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLT---SDGEV 137 (253)
T ss_pred ecCCCCcHHHHHhhc----------------CCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEc---cCCeE
Confidence 999999998866432 25789999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~ 335 (577)
+|+|||.+.............|+..|+|||.+.+. ++.++||||||+++|+|++|..||...+.......+..... +
T Consensus 138 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~ 215 (253)
T cd05122 138 KLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGP--P 215 (253)
T ss_pred EEeeccccccccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCC--C
Confidence 99999999877654323456789999999987654 57889999999999999999999987755444444333211 1
Q ss_pred CCCC-CCCCHHHHHHHHHccccCcCCCCCHHHHhcCcc
Q 008127 336 RKPW-PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372 (577)
Q Consensus 336 ~~~~-~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~ 372 (577)
.... ..++..+.++|.+||..||.+|||+.++++|||
T Consensus 216 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 216 GLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred CcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 1111 224789999999999999999999999999999
No 290
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-40 Score=344.61 Aligned_cols=265 Identities=29% Similarity=0.503 Sum_probs=226.3
Q ss_pred CccccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE
Q 008127 88 FGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 167 (577)
Q Consensus 88 ~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 167 (577)
+....+....|+|.+.||.|.+|.||+++++.+++..|||+..... ...++++.|.+||+.+++|||++.+|++|.
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~----d~deEiE~eynil~~~~~hpnv~~fyg~~~ 86 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE----DEEEEIELEYNMLKKYSHHPNVATFYGAFI 86 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc----cccHHHHHHHHHHHhccCCCCcceEEEEEE
Confidence 3334445567999999999999999999999999999999886653 245678889999999999999999999986
Q ss_pred -----cCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCC
Q 008127 168 -----DDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP 242 (577)
Q Consensus 168 -----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp 242 (577)
.++.+|||||||.||++.|.+... +..++.|..+++|+..++.||.+||.+.+||||||-
T Consensus 87 k~~~~~~DqLWLVMEfC~gGSVTDLVKn~---------------~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG 151 (953)
T KOG0587|consen 87 KKDPGNGDQLWLVMEFCGGGSVTDLVKNT---------------KGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKG 151 (953)
T ss_pred EecCCCCCeEEEEeeccCCccHHHHHhhh---------------cccchhhHHHHHHHHHHHHHHHHHhhcceeeecccC
Confidence 357899999999999999987644 267899999999999999999999999999999999
Q ss_pred CcEEeecCCCCCCeeEEecCCCcccCCC-CCccccccCCccccchhcccC------CCCCCchhhHHHHHHHHHhCCCCC
Q 008127 243 ENFLFKSAKEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK------SGPESDVWSIGVITYILLCGRRPF 315 (577)
Q Consensus 243 ~NILl~~~~~~~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~------~~~~~DiwSlG~il~el~tg~~Pf 315 (577)
.|||++ .++.|||+|||.+..+... ....+.+|||.|||||++... |...+|+||||++..||.-|.+|+
T Consensus 152 ~NiLLT---~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl 228 (953)
T KOG0587|consen 152 QNVLLT---ENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPL 228 (953)
T ss_pred ceEEEe---ccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCc
Confidence 999999 5889999999998876543 345678999999999998642 356799999999999999999999
Q ss_pred CCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 316 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 316 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
.++-+...+-.|.+..+. ....|...++++.+||..||.+|-++||+..++|+|||+++
T Consensus 229 ~DmHPmraLF~IpRNPPP-kLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e 287 (953)
T KOG0587|consen 229 CDMHPMRALFLIPRNPPP-KLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITE 287 (953)
T ss_pred cCcchhhhhccCCCCCCc-cccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence 888777666555554332 22335667899999999999999999999999999999994
No 291
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.8e-39 Score=318.30 Aligned_cols=243 Identities=23% Similarity=0.345 Sum_probs=198.3
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|+++.+++.||+|.+.... .......+.+|+++++.+ +||||+++++++.....+|+||||+++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVMELVQG 77 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEcCCCCeEEEEeeccC
Confidence 36999999999999999999999999875432 234556789999999999 599999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
++|.+++... ...+++..++.++.|++.||.|||++||+||||||+||+++ .++.+||+||
T Consensus 78 ~~L~~~~~~~----------------~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~---~~~~~kl~df 138 (252)
T cd05084 78 GDFLTFLRTE----------------GPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVT---EKNVLKISDF 138 (252)
T ss_pred CcHHHHHHhC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEc---CCCcEEECcc
Confidence 9998876422 34588999999999999999999999999999999999998 4678999999
Q ss_pred CCCcccCCCCCc---cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCC
Q 008127 262 GLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRR 336 (577)
Q Consensus 262 Gla~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~~~~ 336 (577)
|++......... ....++..|+|||.+.+ .++.++|||||||++|+|++ |..||...........+..... .
T Consensus 139 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~---~ 215 (252)
T cd05084 139 GMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVR---L 215 (252)
T ss_pred ccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC---C
Confidence 998765432111 11123456999998764 46889999999999999998 8999977766655555544322 1
Q ss_pred CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 337 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 337 ~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.....++..+.+|+.+||..+|.+|||+.++++
T Consensus 216 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 216 PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 223456889999999999999999999999874
No 292
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.2e-39 Score=318.79 Aligned_cols=245 Identities=33% Similarity=0.605 Sum_probs=211.3
Q ss_pred ecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCCCc
Q 008127 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183 (577)
Q Consensus 104 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 183 (577)
||.|+||.||++.+..+++.||+|.+.+...........+..|+.+++.+. ||||+++++.+..++.+|+||||+++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN-HPFIVKLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcC-CCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence 699999999999998899999999987765544446678899999999995 9999999999999999999999999999
Q ss_pred hhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCC
Q 008127 184 LLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263 (577)
Q Consensus 184 L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGl 263 (577)
|.+++... ..+++..+..++.|++.||.|||+.+++|+||+|+||+++ .++.++|+|||+
T Consensus 80 L~~~l~~~-----------------~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~---~~~~~~l~d~~~ 139 (250)
T cd05123 80 LFSHLSKE-----------------GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLD---ADGHIKLTDFGL 139 (250)
T ss_pred HHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEc---CCCcEEEeecCc
Confidence 98877433 4689999999999999999999999999999999999998 477899999999
Q ss_pred CcccCCC-CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCC
Q 008127 264 SDFIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 341 (577)
Q Consensus 264 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 341 (577)
+...... .......++..|+|||.+.+. .+.++|+||||+++|+|++|..||...........+......++ ..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~ 215 (250)
T cd05123 140 AKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFP----EF 215 (250)
T ss_pred ceecccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCC----CC
Confidence 9876543 233456789999999987654 47889999999999999999999987776666666665433322 34
Q ss_pred CCHHHHHHHHHccccCcCCCCCH---HHHhcCccc
Q 008127 342 ISNSAKDFVKKLLVKDPRARLTA---AQALSHPWV 373 (577)
Q Consensus 342 ~s~~~~~li~~~l~~dP~~Rpt~---~~il~hp~f 373 (577)
++..+.++|.+||..||++|||+ .++++||||
T Consensus 216 ~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 216 LSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred CCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 58899999999999999999999 999999998
No 293
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=4.4e-39 Score=315.45 Aligned_cols=252 Identities=34% Similarity=0.580 Sum_probs=213.4
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|.+.+.||.|++|.||++.+..+++.||+|.+...... ......+.+|++++.++ .|||++++++++...+.+++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~ 78 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNL-KHPNIVKYIGSIETSDSLYIIL 78 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-HHHHHHHHHHHHHHHhC-CCCCccEEEEEEEeCCEEEEEE
Confidence 488999999999999999999999999999998765432 24567899999999999 4999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+.+.. ...+++..++.++.|++.||.|||+.||+||||||+||+++. ++.+
T Consensus 79 e~~~~~~L~~~~~~-----------------~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~---~~~~ 138 (254)
T cd06627 79 EYAENGSLRQIIKK-----------------FGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTK---DGVV 138 (254)
T ss_pred ecCCCCcHHHHHHh-----------------ccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECC---CCCE
Confidence 99999999887643 257899999999999999999999999999999999999984 7889
Q ss_pred eEEecCCCcccCCCCC-ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+|+|||++........ .....++..|+|||.+.+. ++.++||||+|+++|+|++|..||.................
T Consensus 139 ~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-- 216 (254)
T cd06627 139 KLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDH-- 216 (254)
T ss_pred EEeccccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCC--
Confidence 9999999987654332 2345789999999987643 57889999999999999999999987665444444432211
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
....+.++..+.+++.+||..+|++|||+.+++.||||
T Consensus 217 -~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 217 -PPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred -CCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 12234678999999999999999999999999999997
No 294
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=9.2e-40 Score=334.57 Aligned_cols=264 Identities=30% Similarity=0.467 Sum_probs=210.1
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--CC
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DN 170 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~ 170 (577)
.+.++|.+.+.||.|+||.||+|.+..+|..||||++..... .......+.+|+.++.++.+||||+++++++.. ..
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~ 82 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR-NATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDK 82 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC-cchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCc
Confidence 456789999999999999999999998999999998854321 123445677899999999559999999999864 34
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+|+||||++ ++|.+.+. ...+++..+..++.||+.||.|||+.||+||||||+||+++
T Consensus 83 ~~~lv~e~~~-~~L~~~~~------------------~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~-- 141 (337)
T cd07852 83 DIYLVFEYME-TDLHAVIR------------------ANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLN-- 141 (337)
T ss_pred eEEEEecccc-cCHHHHHh------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc--
Confidence 6899999996 58876552 13677888899999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCC------CccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhH
Q 008127 251 KEDSSLKATDFGLSDFIKPGK------KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDG 322 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~------~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~ 322 (577)
.++.+||+|||++....... ......||+.|+|||.+.+ ..+.++|||||||++|+|++|+.||.+....+
T Consensus 142 -~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~ 220 (337)
T cd07852 142 -SDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN 220 (337)
T ss_pred -CCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 57899999999997654322 2234578999999998754 35789999999999999999999998766544
Q ss_pred HHHHHHhCCCC---------------------------CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 323 IFKEVLRNKPD---------------------------FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 323 ~~~~i~~~~~~---------------------------~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
....+...... ......+.++.++.++|.+||+.||.+|||+.++++||||+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~ 300 (337)
T cd07852 221 QLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ 300 (337)
T ss_pred HHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhh
Confidence 43333221110 011122447889999999999999999999999999999987
Q ss_pred cCCC
Q 008127 376 GGDA 379 (577)
Q Consensus 376 ~~~~ 379 (577)
....
T Consensus 301 ~~~~ 304 (337)
T cd07852 301 FHNP 304 (337)
T ss_pred hccC
Confidence 6443
No 295
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=2e-39 Score=325.41 Aligned_cols=266 Identities=23% Similarity=0.316 Sum_probs=210.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCC-----CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKAN-----GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~-----~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
++|++.+.||+|+||.||++.+... ...+|+|.+..... ......+.+|+.+++++.+||||+++++++..++
T Consensus 12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT--EKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC--HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 4799999999999999999987643 36899998865432 3345678899999999966999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+++||||+++|+|.+++........... ..........+++..+..++.||+.||.|||+.+|+||||||+|||++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~-- 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYAS-PDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVT-- 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccc-cccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEc--
Confidence 99999999999999998865321111000 000112346789999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
.++.+||+|||++........ .....++..|+|||++.+ .++.++|||||||++|+|++ |..||.+....+...
T Consensus 167 -~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 245 (293)
T cd05053 167 -EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK 245 (293)
T ss_pred -CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHH
Confidence 478999999999987654321 122335677999998754 46889999999999999997 999998887777666
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
.+..... . ......+..+.+|+.+||..||.+|||+.+++++
T Consensus 246 ~~~~~~~-~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 246 LLKEGYR-M--EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HHHcCCc-C--CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 6554321 1 1224578899999999999999999999999874
No 296
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.1e-39 Score=330.14 Aligned_cols=256 Identities=28% Similarity=0.406 Sum_probs=203.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC------
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD------ 169 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~------ 169 (577)
++|.+.+.||.|+||.||+|.++.+++.||||++...... ......+.+|+++++.+ +||||+++++++...
T Consensus 8 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEK-DGFPITALREIKILKKL-KHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred ccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCC-CCcchhHHHHHHHHHhc-CCCCccchhhheecccccccc
Confidence 5799999999999999999999999999999988654321 11234567899999999 599999999887543
Q ss_pred --CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 170 --NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
..+|+||||+.+ +|...+.. ....+++..+..++.||+.||.|||++||+||||||+||++
T Consensus 86 ~~~~~~lv~~~~~~-~l~~~~~~----------------~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~ 148 (311)
T cd07866 86 KRGSVYMVTPYMDH-DLSGLLEN----------------PSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILI 148 (311)
T ss_pred cCceEEEEEecCCc-CHHHHHhc----------------cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 357999999964 66554422 23578999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCC------------CccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCC
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGK------------KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRR 313 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~------------~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~ 313 (577)
+ .++.+||+|||++....... ......|++.|+|||++.+ .++.++|||||||++|+|++|++
T Consensus 149 ~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~ 225 (311)
T cd07866 149 D---NQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRP 225 (311)
T ss_pred C---CCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCC
Confidence 8 47899999999997543221 1223467889999998754 35889999999999999999999
Q ss_pred CCCCCChhHHHHHHHhCCCCCCC--------------------------CCCCCCCHHHHHHHHHccccCcCCCCCHHHH
Q 008127 314 PFWDKTEDGIFKEVLRNKPDFRR--------------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQA 367 (577)
Q Consensus 314 Pf~~~~~~~~~~~i~~~~~~~~~--------------------------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~i 367 (577)
||.+.+.......+......... ..+..+++.+.+||.+||..||.+|||+.++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~el 305 (311)
T cd07866 226 ILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDA 305 (311)
T ss_pred CCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHH
Confidence 99887776655554432111000 0012345678999999999999999999999
Q ss_pred hcCccc
Q 008127 368 LSHPWV 373 (577)
Q Consensus 368 l~hp~f 373 (577)
+.||||
T Consensus 306 l~~~~f 311 (311)
T cd07866 306 LEHPYF 311 (311)
T ss_pred hcCCCC
Confidence 999998
No 297
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-40 Score=334.31 Aligned_cols=258 Identities=26% Similarity=0.350 Sum_probs=200.6
Q ss_pred CccccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE
Q 008127 88 FGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 167 (577)
Q Consensus 88 ~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 167 (577)
+.....+++.|.-...||+|+||.||+|.- .+|..||||++...... . ..+|.+|+.++.+++ |||+|+|+|||.
T Consensus 67 ~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l-~~~~~vAVK~~~~~~~~--~-~~eF~~Ei~~ls~l~-H~Nlv~LlGyC~ 141 (361)
T KOG1187|consen 67 YDELRKATNNFSESNLIGEGGFGTVYKGVL-SDGTVVAVKRLSSNSGQ--G-EREFLNEVEILSRLR-HPNLVKLLGYCL 141 (361)
T ss_pred HHHHHHHHhCCchhcceecCCCeEEEEEEE-CCCCEEEEEEecCCCCc--c-hhHHHHHHHHHhcCC-CcCcccEEEEEe
Confidence 333445667888888999999999999984 45589999987665421 1 455999999999996 999999999999
Q ss_pred cCC-eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCC-CCCHHHHHHHHHHHHHHHHHHHhc---CceeccCCC
Q 008127 168 DDN-YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS-RYTEKDAAVVVRQMLRVAAECHLH---GLVHRDMKP 242 (577)
Q Consensus 168 ~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~i~~qil~~l~~LH~~---~iiHrDlKp 242 (577)
+.+ ..+||+||+++|+|.++|... .. .+++.....|+.+++.||+|||.. .||||||||
T Consensus 142 e~~~~~~LVYEym~nGsL~d~L~~~----------------~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKs 205 (361)
T KOG1187|consen 142 EGGEHRLLVYEYMPNGSLEDHLHGK----------------KGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKS 205 (361)
T ss_pred cCCceEEEEEEccCCCCHHHHhCCC----------------CCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCH
Confidence 988 599999999999999988543 12 789999999999999999999985 399999999
Q ss_pred CcEEeecCCCCCCeeEEecCCCcccCC-CCCcccc-ccCCccccchhcc-cCCCCCCchhhHHHHHHHHHhCCCCCCCCC
Q 008127 243 ENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQDI-VGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKT 319 (577)
Q Consensus 243 ~NILl~~~~~~~~vkl~DFGla~~~~~-~~~~~~~-~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~tg~~Pf~~~~ 319 (577)
+||||+ ++..+||+|||+|+.... ....... .||.+|+|||.+. +..+.++|||||||+|.||+||+.|.....
T Consensus 206 sNILLD---~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~ 282 (361)
T KOG1187|consen 206 SNILLD---EDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSR 282 (361)
T ss_pred HHeeEC---CCCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCC
Confidence 999999 589999999999976654 3333333 8999999999875 567999999999999999999998886432
Q ss_pred ---h---hHHHHHHHhCC--CCCCCCCC--CCCC-----HHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 320 ---E---DGIFKEVLRNK--PDFRRKPW--PSIS-----NSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 320 ---~---~~~~~~i~~~~--~~~~~~~~--~~~s-----~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
. .+.....+... .++..+.. ...+ ..+..+..+|++.+|..||++.++++
T Consensus 283 ~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 283 PRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred CcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 1 11111222211 11111111 1222 23668889999999999999999744
No 298
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=2.5e-39 Score=325.18 Aligned_cols=262 Identities=21% Similarity=0.239 Sum_probs=207.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCC----------------CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANG----------------DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~----------------~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpni 159 (577)
.+|++++.||+|+||.||+|.+..++ ..||+|.+..... ....+.+.+|++++.++. ||||
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~l~-~~~i 81 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS--DNAREDFLKEVKILSRLS-DPNI 81 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC--HHHHHHHHHHHHHHHhcC-CCCE
Confidence 47999999999999999999876543 5689998875432 245678899999999995 9999
Q ss_pred eEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceecc
Q 008127 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 239 (577)
Q Consensus 160 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrD 239 (577)
+++++++..++..++||||+++++|.+++.......... ......+++..++.++.|++.||.|||++||+|||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~d 155 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGL------ACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRD 155 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccc------cccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccc
Confidence 999999999999999999999999998875431100000 11224689999999999999999999999999999
Q ss_pred CCCCcEEeecCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh--CCC
Q 008127 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC--GRR 313 (577)
Q Consensus 240 lKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t--g~~ 313 (577)
|||+||+++ .++.++|+|||++........ .....+++.|+|||.+.+ .++.++|||||||++|+|++ |..
T Consensus 156 lkp~Nili~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~ 232 (296)
T cd05051 156 LATRNCLVG---KNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQ 232 (296)
T ss_pred cchhceeec---CCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCC
Confidence 999999998 468999999999976543321 223456788999998765 66899999999999999998 788
Q ss_pred CCCCCChhHHHHHHHhC----CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 314 PFWDKTEDGIFKEVLRN----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 314 Pf~~~~~~~~~~~i~~~----~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
||...+..+.+..+... .........+.++.++.+++.+||..||.+|||+.++++
T Consensus 233 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 233 PYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred CCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 98777766666655432 111111122456789999999999999999999999964
No 299
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=3.1e-39 Score=319.23 Aligned_cols=250 Identities=24% Similarity=0.347 Sum_probs=206.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCC---CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~---~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
++|++.+.||+|+||.||+|.+..+ ...||||.+.... .......+.+|+.+++.+ +||||+++++.+...+.+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQF-DHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhC-CCCCcceEeEEEecCCce
Confidence 4689999999999999999988654 4579999886543 233556788999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
++||||+++++|.+++... ...+++..+..++.|++.||.|||+++|+||||||+|||++ .
T Consensus 81 ~iv~e~~~~~~L~~~~~~~----------------~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~---~ 141 (266)
T cd05033 81 MIITEYMENGSLDKFLREN----------------DGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVN---S 141 (266)
T ss_pred EEEEEcCCCCCHHHHHHhc----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc---C
Confidence 9999999999998877432 24689999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCC-CCcc--ccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPG-KKFQ--DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~-~~~~--~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i 327 (577)
++.++|+|||++...... .... ...+++.|+|||.+.+ .++.++||||||+++|+|++ |..||...........+
T Consensus 142 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~ 221 (266)
T cd05033 142 NLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAV 221 (266)
T ss_pred CCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Confidence 788999999999876421 1111 2345678999998764 46889999999999999998 99999887777776666
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
...... +....++..+.+|+.+||..+|.+||++.+++++
T Consensus 222 ~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 222 EDGYRL---PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred HcCCCC---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 543221 1224578999999999999999999999999864
No 300
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=3.6e-39 Score=320.65 Aligned_cols=258 Identities=21% Similarity=0.292 Sum_probs=208.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCC-----CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKAN-----GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~-----~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
++|++.+.||+|+||.||+|.++.. +..||+|.+..... ......+.+|+.++..+ +||||+++++++....
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~ 82 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENAS--MRERIEFLNEASVMKEF-NCHHVVRLLGVVSTGQ 82 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccC--HHHHHHHHHHHHHHHhC-CCCceeEEEEEEcCCC
Confidence 4799999999999999999987643 47899999865432 23456788999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
..|+||||+++|+|.+++........ .......+++..+..++.||+.||.|||+.+|+||||||+|||++
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~-- 153 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAE-------NNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVA-- 153 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchh-------hccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEc--
Confidence 99999999999999998864311000 001234578899999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
.++.+||+|||+++.+..... .....+|..|+|||.+. +.++.++|||||||++|+|++ |..||.+.+..+...
T Consensus 154 -~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~ 232 (277)
T cd05032 154 -EDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLK 232 (277)
T ss_pred -CCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHH
Confidence 478899999999976543321 12345678999999875 456889999999999999998 999998888777776
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+..... .. ....++..+.+++.+||+.+|.+|||+.++++
T Consensus 233 ~~~~~~~-~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 233 FVIDGGH-LD--LPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred HHhcCCC-CC--CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 6653322 11 12346889999999999999999999999976
No 301
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=3.2e-39 Score=320.16 Aligned_cols=254 Identities=20% Similarity=0.292 Sum_probs=204.6
Q ss_pred eeeeeeecccCCeEEEEEEEcCC---CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe---
Q 008127 98 YTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY--- 171 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~---~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~--- 171 (577)
|.+.+.||+|+||.||+|....+ +..||||.+..... .......+.+|+.+++.+ +||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~ 78 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH-TYSEIEEFLSEAACMKDF-DHPNVMKLIGVCFEASSLQK 78 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC-CHHHHHHHHHHHHHHHhC-CCCCeeeEEeeeccCCcccc
Confidence 56788999999999999987653 47899999865432 233467789999999999 59999999998865443
Q ss_pred ---EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 172 ---VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 172 ---~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
.++||||+++|+|...+..... ......+++..++.++.|++.||.|||+.+|+||||||+||+++
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~-----------~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~ 147 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRL-----------GGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLR 147 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhc-----------cCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEEC
Confidence 7999999999999887754311 01224689999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCCc---cccccCCccccchhcccC-CCCCCchhhHHHHHHHHHh-CCCCCCCCChhHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 323 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~ 323 (577)
+++.+||+|||+++........ ....++..|+|||.+.+. ++.++|||||||++|||++ |..||.+....+.
T Consensus 148 ---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~ 224 (273)
T cd05035 148 ---EDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEI 224 (273)
T ss_pred ---CCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 4788999999999866433221 123456789999988654 5889999999999999999 9999988877777
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
+..+..+... .....++..+.+++.+||..||.+|||+.+++++
T Consensus 225 ~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 225 YDYLRHGNRL---KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred HHHHHcCCCC---CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 7666554321 1224578999999999999999999999999763
No 302
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.1e-39 Score=321.58 Aligned_cols=248 Identities=23% Similarity=0.342 Sum_probs=208.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|++.+.||.|+||.||+|.+.. +..+|+|.+.... ......+.+|+.+++.+ +||||+++++++...+.+++|
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDD---LLKQQDFQKEVQALKRL-RHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccc---hhhHHHHHHHHHHHhcC-CCcchhheeeeEecCCCeEEE
Confidence 469999999999999999999877 8899999987653 22456788999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++|+|.+++... ....++...+..++.||+.||.|||++||+||||||+||+++ .++.
T Consensus 81 ~e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~---~~~~ 142 (261)
T cd05148 81 TELMEKGSLLAFLRSP---------------EGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVG---EDLV 142 (261)
T ss_pred EeecccCCHHHHHhcC---------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEc---CCce
Confidence 9999999999877532 235688999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCCC-ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCC
Q 008127 256 LKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+||+|||++........ .....++..|+|||.+.+ .++.++||||||+++|+|++ |+.||...+..+.+..+.....
T Consensus 143 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~ 222 (261)
T cd05148 143 CKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYR 222 (261)
T ss_pred EEEccccchhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCc
Confidence 99999999976643221 123346678999998764 45889999999999999998 8999988877777777764322
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
......+++.+.+++.+||..||.+|||+.++++
T Consensus 223 ---~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 223 ---MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred ---CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 2223567899999999999999999999999875
No 303
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.4e-39 Score=325.73 Aligned_cols=256 Identities=29% Similarity=0.519 Sum_probs=207.6
Q ss_pred ceeeeeeecccCCeEEEEEEEc---CCCCEEEEEEecccccC-chhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMI-LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
+|++.+.||+|+||.||+|++. .++..||||++.+.... .......+.+|+.++.++.+||||+++++.+..+..+
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 3889999999999999999864 46789999998654321 1224466889999999997899999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+||||+++|+|.+.+.. ...+++..++.++.|++.||.|||+.+++||||||+||+++ .
T Consensus 81 ~lv~e~~~~~~L~~~~~~-----------------~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~---~ 140 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ-----------------REHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLD---S 140 (288)
T ss_pred EEEEecCCCCcHHHHHhh-----------------cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---C
Confidence 999999999999886642 25688999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCCCC--ccccccCCccccchhcccC---CCCCCchhhHHHHHHHHHhCCCCCCCCC----hhHH
Q 008127 253 DSSLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKT----EDGI 323 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~---~~~~~DiwSlG~il~el~tg~~Pf~~~~----~~~~ 323 (577)
++.++|+|||++........ .....|+..|+|||.+.+. .+.++||||||+++|+|++|..||.... ..+.
T Consensus 141 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~ 220 (288)
T cd05583 141 EGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEI 220 (288)
T ss_pred CCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHH
Confidence 67899999999876543322 2235689999999987643 4788999999999999999999995432 2233
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCC---HHHHhcCcccccc
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT---AAQALSHPWVREG 376 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt---~~~il~hp~f~~~ 376 (577)
...+...... ....++..+.++|.+||+.||++||| +.++|+||||+..
T Consensus 221 ~~~~~~~~~~----~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~ 272 (288)
T cd05583 221 SRRILKSKPP----FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGI 272 (288)
T ss_pred HHHHHccCCC----CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccC
Confidence 3334333322 22457889999999999999999998 5677999999875
No 304
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=4e-39 Score=328.18 Aligned_cols=261 Identities=33% Similarity=0.518 Sum_probs=208.2
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-CCe
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-DNY 171 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~~~ 171 (577)
.+.++|++.+.||.|+||.||+|.+..+|+.||||++.+... .......+.+|+.+++.+ .||||++++++|.. ...
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS-TPVLAKRTYRELKLLKHL-RHENIISLSDIFISPLED 84 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc-ccchhHHHHHHHHHHHhc-CCCCeeeEeeeEecCCCc
Confidence 356789999999999999999999999999999998865322 123456678999999999 49999999999875 567
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+|+||+ +++|.+.+. ...+++..+..++.||+.||.|||+.+|+||||+|+|||++
T Consensus 85 ~~lv~e~~-~~~L~~~~~------------------~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~--- 142 (328)
T cd07856 85 IYFVTELL-GTDLHRLLT------------------SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILIN--- 142 (328)
T ss_pred EEEEeehh-ccCHHHHHh------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeEC---
Confidence 89999998 567766442 24578888999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 252 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
.++.+||+|||++..... ......+++.|+|||.+.+ .++.++|||||||++|+|++|+.||.+.........+..
T Consensus 143 ~~~~~~l~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~ 220 (328)
T cd07856 143 ENCDLKICDFGLARIQDP--QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITD 220 (328)
T ss_pred CCCCEEeCccccccccCC--CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 478899999999976532 2244578899999998754 468899999999999999999999977654322211111
Q ss_pred C-----------------------CC---CCC-CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCC
Q 008127 330 N-----------------------KP---DFR-RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379 (577)
Q Consensus 330 ~-----------------------~~---~~~-~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~ 379 (577)
. .. ..+ ....+.++..+.++|.+||+.+|++|||+.+++.||||......
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~ 297 (328)
T cd07856 221 LLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDP 297 (328)
T ss_pred HhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCC
Confidence 0 00 000 01124577899999999999999999999999999999865543
No 305
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.6e-39 Score=336.45 Aligned_cols=268 Identities=22% Similarity=0.285 Sum_probs=209.1
Q ss_pred cceeeeeeecccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
++|.+++.||+|+||.||+|++. .+++.||||++..... ....+.+.+|+.+|.++..||||+++++++...+
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR--SSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC--hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 46889999999999999999864 3456899999975432 2334578899999999955999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhh------------------------------------------------------
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTT------------------------------------------------------ 196 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~------------------------------------------------------ 196 (577)
.+++|||||++|+|.+++........
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 99999999999999999875421000
Q ss_pred ---------------------------hhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 197 ---------------------------LTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 197 ---------------------------~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
....+.........++...++.++.||+.||.|||+.+|+||||||+|||++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~- 273 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLIC- 273 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEe-
Confidence 0000111122334678889999999999999999999999999999999998
Q ss_pred CCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 324 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~ 324 (577)
.++.+||+|||+++....... .....+++.|+|||.+.+. ++.++|||||||++|||++ |..||......+..
T Consensus 274 --~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~ 351 (401)
T cd05107 274 --EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQF 351 (401)
T ss_pred --CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHH
Confidence 477899999999976532211 1234578899999987654 5889999999999999998 89999776655555
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
...+...... ..+..++.++.+|+.+||..+|.+||++.++++.
T Consensus 352 ~~~~~~~~~~--~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 352 YNAIKRGYRM--AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred HHHHHcCCCC--CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 5544433222 1234578999999999999999999999999863
No 306
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-41 Score=310.97 Aligned_cols=265 Identities=24% Similarity=0.311 Sum_probs=217.9
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
.+-+..||.|+||+|++-.++.+|+..|||+|..... .....+++.|.+...+-.+.||||++||.+-.++..||.||
T Consensus 66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCME 143 (361)
T KOG1006|consen 66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICME 143 (361)
T ss_pred HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHH
Confidence 3445679999999999999999999999999987653 45678899999988888899999999999988999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCCCe
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
+|. -+| |.+... .+..+...++|.-+..|..-.+.||.||-. ..|||||+||+|||++ ..|.|
T Consensus 144 LMd-~Sl-DklYk~-----------vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILld---r~G~v 207 (361)
T KOG1006|consen 144 LMD-ISL-DKLYKR-----------VYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLD---RHGDV 207 (361)
T ss_pred HHh-hhH-HHHHHH-----------HHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEe---cCCCE
Confidence 994 343 333322 233356789999999999999999999986 6899999999999999 58899
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhccc---CCCCCCchhhHHHHHHHHHhCCCCCCCCC-hhHHHHHHHhCCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKT-EDGIFKEVLRNKP 332 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwSlG~il~el~tg~~Pf~~~~-~~~~~~~i~~~~~ 332 (577)
||||||.+..+..+-..+.-+|...|||||.+.. +|.-++||||||++|||+.||..||.+.+ ..+.+..+..+.+
T Consensus 208 KLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdp 287 (361)
T KOG1006|consen 208 KLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDP 287 (361)
T ss_pred eeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCC
Confidence 9999999987765444445579999999998863 36889999999999999999999997653 4556666666665
Q ss_pred CCCCCCC--CCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCC
Q 008127 333 DFRRKPW--PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 380 (577)
Q Consensus 333 ~~~~~~~--~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~ 380 (577)
+.....- -.++..+..||..||.+|-..||...+++++||++.+....
T Consensus 288 p~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~~~ 337 (361)
T KOG1006|consen 288 PILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAVEG 337 (361)
T ss_pred CeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhhhcC
Confidence 4332221 24788999999999999999999999999999999876543
No 307
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=3.1e-39 Score=317.43 Aligned_cols=246 Identities=23% Similarity=0.360 Sum_probs=203.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||+|.++ ++..+|+|.+..... ....+.+|+.+++.+ +||||+++++++...+..|+||
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM----SEDDFIEEAKVMMKL-SHPNLVQLYGVCTKQRPIFIVT 78 (256)
T ss_pred HcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC----CHHHHHHHHHHHHhC-CCCCEEEEEEEEcCCCceEEEE
Confidence 5889999999999999999875 466899998865432 235678899999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+++... ...+++..+..++.||+.||.|||+.||+||||||+||+++ .++.+
T Consensus 79 e~~~~~~L~~~l~~~----------------~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~ 139 (256)
T cd05059 79 EYMANGCLLNYLRER----------------KGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVG---EDNVV 139 (256)
T ss_pred ecCCCCCHHHHHHhc----------------ccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEEC---CCCcE
Confidence 999999999877532 24688999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCCCc--cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCC
Q 008127 257 KATDFGLSDFIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
||+|||+++........ ....++..|+|||.+.+ .++.++|||||||++|+|++ |..||...+..+....+.....
T Consensus 140 kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~ 219 (256)
T cd05059 140 KVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYR 219 (256)
T ss_pred EECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCc
Confidence 99999999765432211 11233457999998764 56889999999999999999 8999987777776666654322
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
.......+.++.+++.+||..+|++|||+.++++.
T Consensus 220 ---~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 220 ---LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred ---CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 11224578999999999999999999999999863
No 308
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=3.9e-39 Score=317.91 Aligned_cols=246 Identities=26% Similarity=0.363 Sum_probs=201.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|++.+.||+|+||.||+|.+..+ ..||+|.+..... ..+.+.+|+++++.+ +||||+++++.+.. ...|+|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~----~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~-~~~~lv 78 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIV 78 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc----CHHHHHHHHHHHHhC-CCCCcceEEEEECC-CCcEEE
Confidence 5799999999999999999987655 4699999875432 345688999999999 59999999998754 568999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++|+|.+++... ....+++..+..++.|++.||.|||+.+|+||||||+||+++ .++.
T Consensus 79 ~e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~---~~~~ 140 (262)
T cd05071 79 TEYMSKGSLLDFLKGE---------------MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLV 140 (262)
T ss_pred EEcCCCCcHHHHHhhc---------------cccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEc---CCCc
Confidence 9999999998877432 224578899999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCCCc--cccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGKKF--QDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+||+|||.+......... ....++..|+|||++. +.++.++|||||||++|+|++ |..||.+....+....+....
T Consensus 141 ~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~ 220 (262)
T cd05071 141 CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 220 (262)
T ss_pred EEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCC
Confidence 999999999765433221 2334667899999875 456889999999999999999 888998877777766665432
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.. .....++..+.+|+.+||..+|.+|||+.++++
T Consensus 221 ~~---~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 221 RM---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred CC---CCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 21 112457899999999999999999999999876
No 309
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.5e-39 Score=324.23 Aligned_cols=254 Identities=33% Similarity=0.518 Sum_probs=209.0
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
|.+.+.||.|++|.||+|.+..+|+.+|+|.+..... .+.....+.+|+.+++++. ||||+++++++..+..+++|+|
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e 78 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPKTALREIKLLKELN-HPNIIKLLDVFRHKGDLYLVFE 78 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-cchhHHHHHHHHHHHHHhc-CCCcchHHHhhccCCCEEEEEe
Confidence 5678899999999999999998999999999865432 2234567889999999995 9999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
|+++ +|.+.+... ...+++..+..++.||+.||.|||+.+|+|+||||+||+++ .++.+|
T Consensus 79 ~~~~-~l~~~l~~~----------------~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~ 138 (283)
T cd05118 79 FMDT-DLYKLIKDR----------------QRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLIN---TEGVLK 138 (283)
T ss_pred ccCC-CHHHHHHhh----------------cccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEEC---CCCcEE
Confidence 9975 887766432 25789999999999999999999999999999999999998 478899
Q ss_pred EEecCCCcccCCCC-CccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 258 ATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 258 l~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
|+|||.+....... ......++..|+|||.+.+. ++.++||||||+++|+|++|+.||.+.+..+.+..+.......
T Consensus 139 l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~ 218 (283)
T cd05118 139 LADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTP 218 (283)
T ss_pred EeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCC
Confidence 99999997765433 33445788999999987653 5889999999999999999999998777655544443211110
Q ss_pred C--------------------------CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 335 R--------------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 335 ~--------------------------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
. ...++.++.++.+||.+||.+||.+||++.+++.||||
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 219 DPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred chHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 0 01123467889999999999999999999999999997
No 310
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.8e-39 Score=324.06 Aligned_cols=264 Identities=17% Similarity=0.229 Sum_probs=210.0
Q ss_pred ceeeeeeecccCCeEEEEEEEcCC-----CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKAN-----GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~-----~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
+|++.+.||+|+||.||+|.+..+ +..||||++.... .......+.+|+.++..+ +||||+++++++.....
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~~ 82 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRL-QHPNIVCLLGVVTKEQP 82 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEcCCCc
Confidence 588899999999999999987543 5789999987543 223456788999999999 59999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.++++||+++++|.+++............ .........+++..+..++.|++.||.|||++||+||||||+|||++
T Consensus 83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~--- 158 (283)
T cd05091 83 LSMIFSYCSHSDLHEFLVMRSPHSDVGST-DDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF--- 158 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCcccccc-ccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEec---
Confidence 99999999999999887543211111000 00111234688899999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
.++.+||+|||+++....... .....+++.|+|||.+. +.++.++|||||||++|||++ |..||.+....+....
T Consensus 159 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05091 159 DKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEM 238 (283)
T ss_pred CCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 467899999999876543222 22345678999999875 556889999999999999998 8899988888777777
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
+....... ....++..+.+|+.+||+.+|.+||++.+++..
T Consensus 239 i~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 239 IRNRQVLP---CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred HHcCCcCC---CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 76654322 124688999999999999999999999999863
No 311
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.2e-39 Score=325.27 Aligned_cols=265 Identities=23% Similarity=0.323 Sum_probs=206.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcC-------CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKA-------NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~-------~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 168 (577)
++|.+.+.||+|+||.||+|.+.. ++..+|+|.+.... .......+.+|+.+++.+.+||||+++++++..
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 95 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 579999999999999999998643 33579999887542 233456788999999999669999999999999
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
.+.+|+||||+++|+|.+++........ ...+.........++...++.++.||+.||.|||++|++||||||+|||++
T Consensus 96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~ 174 (307)
T cd05098 96 DGPLYVIVEYASKGNLREYLRARRPPGM-EYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 174 (307)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCccc-ccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEc
Confidence 9999999999999999998865311000 000000001224588899999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 323 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~ 323 (577)
.++.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+.
T Consensus 175 ---~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~ 251 (307)
T cd05098 175 ---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 251 (307)
T ss_pred ---CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence 468899999999876543221 112234578999998765 45889999999999999998 8999987776666
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
...+..... ......++.++.+|+.+||..+|.+|||+.++++
T Consensus 252 ~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~ 294 (307)
T cd05098 252 FKLLKEGHR---MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 294 (307)
T ss_pred HHHHHcCCC---CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 665544321 1223467899999999999999999999999976
No 312
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=5.6e-39 Score=316.52 Aligned_cols=247 Identities=24% Similarity=0.327 Sum_probs=204.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||.|+||.||+|.+. +++.||+|.+..... ..+.+.+|+.+++++. ||||+++++++...+.+|+|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLR-HPKLIQLYAVCTLEEPIYIV 79 (261)
T ss_pred hheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCC-CCCccceeEEEecCCCeeee
Confidence 46999999999999999999865 457899999865432 3466889999999995 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++++|.+++... ....++...+..++.|++.||.|||+.||+||||||+||+++ .++.
T Consensus 80 ~e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~ 141 (261)
T cd05068 80 TELMKYGSLLEYLQGG---------------AGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVG---ENNI 141 (261)
T ss_pred eecccCCcHHHHHhcc---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEc---CCCC
Confidence 9999999999877432 134688999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCCCc--cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+||+|||++......... ....++..|+|||++.+ .++.++||||||+++|+|++ |+.||.+.+....+..+....
T Consensus 142 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~ 221 (261)
T cd05068 142 CKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGY 221 (261)
T ss_pred EEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC
Confidence 999999999876532111 11223457999998765 45889999999999999999 999998877777776665432
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
. . .....++..+.+++.+||..+|.+||++.++++
T Consensus 222 ~-~--~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 222 R-M--PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred C-C--CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 1 1 122457899999999999999999999999875
No 313
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=5.1e-39 Score=318.54 Aligned_cols=258 Identities=24% Similarity=0.331 Sum_probs=200.8
Q ss_pred eecccCCeEEEEEEEcCCCC--EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 103 LLGHGQFGYTYVATDKANGD--RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 103 ~lG~G~fg~V~~~~~~~~~~--~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
.||+|+||.||+|++..++. .+|+|.+.... .......+.+|+.++.++.+||||+++++++...+.+|+||||++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccC--CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 59999999999999988876 46888775322 233456788999999999779999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
+|+|.+++......... ..+.........+++..++.++.|++.||.|||+.|++||||||+|||++ .++.+||+|
T Consensus 80 ~~~L~~~i~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~---~~~~~kl~d 155 (270)
T cd05047 80 HGNLLDFLRKSRVLETD-PAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENYVAKIAD 155 (270)
T ss_pred CCcHHHHHHhccccccc-cccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEc---CCCeEEECC
Confidence 99999988654211000 00001111234688999999999999999999999999999999999998 478899999
Q ss_pred cCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCCC
Q 008127 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKP 338 (577)
Q Consensus 261 FGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 338 (577)
||++..............+..|+|||++.. .++.++|||||||++|+|++ |..||.+.+..+.+..+.... ....
T Consensus 156 fgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~---~~~~ 232 (270)
T cd05047 156 FGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY---RLEK 232 (270)
T ss_pred CCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCC---CCCC
Confidence 999864321111112234567999998764 45889999999999999997 999998877777666664432 1122
Q ss_pred CCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 339 WPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 339 ~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
...++.++.+++.+||..+|.+|||+.+++.
T Consensus 233 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 233 PLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred CCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 2457789999999999999999999999975
No 314
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.4e-39 Score=320.42 Aligned_cols=247 Identities=28% Similarity=0.441 Sum_probs=199.5
Q ss_pred eeeeeecccCCeEEEEEEEc----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 99 TIGKLLGHGQFGYTYVATDK----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 99 ~~~~~lG~G~fg~V~~~~~~----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.+.+.||.|+||.||+|... ..+..|+||.+... ......+.+.+|+++++++ +||||+++++++...+.+++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l-~h~ni~~~~g~~~~~~~~~l 78 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKL-RHPNIVKLYGFCIENEPLFL 78 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTH-SBTTBE-EEEEEESSSSEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeecccccccc-cccccccccccccccccccc
Confidence 46788999999999999987 44678999998543 2234578899999999999 69999999999998888999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|+|||++|+|.++|... ....+++..+..++.||+.||.|||+++++|+||+|+|||++ .++
T Consensus 79 v~e~~~~g~L~~~L~~~---------------~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~---~~~ 140 (259)
T PF07714_consen 79 VMEYCPGGSLDDYLKSK---------------NKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLD---SNG 140 (259)
T ss_dssp EEE--TTEBHHHHHHHT---------------CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEE---TTT
T ss_pred ccccccccccccccccc---------------cccccccccccccccccccccccccccccccccccccccccc---ccc
Confidence 99999999999988643 246789999999999999999999999999999999999999 478
Q ss_pred CeeEEecCCCcccCCCCC---ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008127 255 SLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~ 329 (577)
.+||+|||++........ .....+...|+|||.+... ++.++||||||+++|||++ |+.||......+....+..
T Consensus 141 ~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~ 220 (259)
T PF07714_consen 141 QVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQ 220 (259)
T ss_dssp EEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999987632221 1234577889999998655 5889999999999999999 7899988888777777754
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+.. .. ....++..+.++|..||..+|.+|||+.++++
T Consensus 221 ~~~-~~--~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 221 GQR-LP--IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp TEE-TT--SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred ccc-ce--eccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 433 11 22457899999999999999999999999875
No 315
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=5.8e-39 Score=315.07 Aligned_cols=255 Identities=27% Similarity=0.449 Sum_probs=215.8
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||++.+..+++.+|+|.+...... ......+.+|+.+++.+. ||||+++++++.....+|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS-QKEREDAVNEIRILASVN-HPNIISYKEAFLDGNKLCIVM 78 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc-HHHHHHHHHHHHHHHhCC-CCCchhhhhhhccCCEEEEEe
Confidence 488999999999999999999999999999998765432 334567789999999995 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+++.... .....+++..++.++.|++.||.|||+.|++|+||+|+||+++. ++.+
T Consensus 79 e~~~~~~L~~~~~~~~-------------~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~---~~~~ 142 (256)
T cd08530 79 EYAPFGDLSKAISKRK-------------KKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVA---NDLV 142 (256)
T ss_pred hhcCCCCHHHHHHHHH-------------hhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEec---CCcE
Confidence 9999999998775431 12367899999999999999999999999999999999999984 6789
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~ 335 (577)
||+|||++...... ......|++.|+|||.+.+. ++.++|+||||+++|+|++|+.||...+..+....+......
T Consensus 143 kl~d~g~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~-- 219 (256)
T cd08530 143 KIGDLGISKVLKKN-MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYP-- 219 (256)
T ss_pred EEeeccchhhhccC-CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC--
Confidence 99999999876544 33345789999999987654 477899999999999999999999888776666665543322
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 336 ~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
. ....++.++.+++.+||..+|.+|||+.++++||++
T Consensus 220 ~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 220 P-IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred C-CchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 1 113577899999999999999999999999999974
No 316
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=6.5e-39 Score=315.86 Aligned_cols=247 Identities=23% Similarity=0.348 Sum_probs=203.9
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.+.|+++++||+|+||.||+|.. .+++.||+|.+..... ....+.+|+.+++++ +||||+++++++. .+.+++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~~ 77 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSM----SPEAFLAEANLMKQL-QHPRLVRLYAVVT-QEPIYI 77 (260)
T ss_pred hHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCC----cHHHHHHHHHHHHhc-CCcCeeeEEEEEc-cCCcEE
Confidence 45799999999999999999985 4678999999876543 346788999999999 5999999999875 456899
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+.+... ....++...+..++.|++.||+|||+.|++||||||+||+++ .++
T Consensus 78 v~e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~---~~~ 139 (260)
T cd05067 78 ITEYMENGSLVDFLKTP---------------EGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVS---ETL 139 (260)
T ss_pred EEEcCCCCCHHHHHHhc---------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEc---CCC
Confidence 99999999999876432 235688999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCC--ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhC
Q 008127 255 SLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~ 330 (577)
.++|+|||++........ .....++..|+|||++.+ .++.++||||||+++|+|++ |++||.+.+..+....+...
T Consensus 140 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~ 219 (260)
T cd05067 140 CCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERG 219 (260)
T ss_pred CEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcC
Confidence 899999999976542221 123346678999998864 45889999999999999999 99999888777766665443
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.. .......+.++.+++.+||..+|++|||+++++.
T Consensus 220 ~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 220 YR---MPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred CC---CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 21 1223457789999999999999999999999875
No 317
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=6.2e-39 Score=317.33 Aligned_cols=249 Identities=23% Similarity=0.355 Sum_probs=205.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCC---EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~---~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.+|++.+.||+|+||.||+|.++.++. .+|+|.+.... .......+.+|+.+++++ +||||+++++++..++..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcc
Confidence 479999999999999999998865543 79999886542 233456789999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+||||+++++|.+++... ...++...+..++.|++.||.|||+.+++||||||+|||++ .
T Consensus 81 ~lv~e~~~~~~L~~~~~~~----------------~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~---~ 141 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKH----------------DGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVN---S 141 (267)
T ss_pred EEEEEcCCCCCHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEEC---C
Confidence 9999999999998876432 24688999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCCCCc----cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
++.++|+|||++......... ....++..|+|||.+.+ .++.++|+|||||++|++++ |..||.+....+....
T Consensus 142 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~ 221 (267)
T cd05066 142 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKA 221 (267)
T ss_pred CCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHH
Confidence 788999999999876432211 12233568999998874 56889999999999999886 9999988877666666
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+.... .. +....+++.+.+++.+||+.+|.+||++.++++
T Consensus 222 ~~~~~-~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 222 IEEGY-RL--PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred HhCCC-cC--CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 65442 22 223467889999999999999999999999875
No 318
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=6.1e-39 Score=315.51 Aligned_cols=241 Identities=24% Similarity=0.314 Sum_probs=197.0
Q ss_pred eecccCCeEEEEEEE--cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 103 LLGHGQFGYTYVATD--KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 103 ~lG~G~fg~V~~~~~--~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
.||+|+||.||+|.+ ..++..||+|++..... .....+.+.+|+.+++.+ +||||+++++++.. ...++||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~~~lv~e~~~ 78 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNN-DPALKDELLREANVMQQL-DNPYIVRMIGICEA-ESWMLVMELAE 78 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCC-cHHHHHHHHHHHHHHHhC-CCCCcceEEEEEcC-CCcEEEEecCC
Confidence 589999999999964 45778999998864432 334567889999999999 59999999998864 46789999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
+|+|.+++.. ...+++..+..++.|++.||.|||++||+||||||.||+++ .++.+||+|
T Consensus 79 ~~~L~~~l~~-----------------~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~---~~~~~kl~D 138 (257)
T cd05116 79 LGPLNKFLQK-----------------NKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLV---TQHYAKISD 138 (257)
T ss_pred CCcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEc---CCCeEEECC
Confidence 9999887642 25689999999999999999999999999999999999998 477899999
Q ss_pred cCCCcccCCCCCc----cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCC
Q 008127 261 FGLSDFIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 261 FGla~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
||++......... ....+++.|+|||.+.. .++.++|||||||++|||++ |..||.+....+....+..+.. .
T Consensus 139 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~-~ 217 (257)
T cd05116 139 FGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER-M 217 (257)
T ss_pred CccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC-C
Confidence 9999876433221 12234678999998764 45789999999999999998 9999988777777666654432 1
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
...+.+++++.+||.+||+.||++||++.+|..
T Consensus 218 --~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 218 --ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred --CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 122458899999999999999999999998854
No 319
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=1.2e-40 Score=297.68 Aligned_cols=254 Identities=28% Similarity=0.549 Sum_probs=212.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC--CeEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NYVY 173 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~~ 173 (577)
++|++.+++|+|.|++||.|.+..+++.++||++.. ...+.+.+|+.||+.|++||||++++++..+. ....
T Consensus 38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP------VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa 111 (338)
T KOG0668|consen 38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP------VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS 111 (338)
T ss_pred chHHHHHHHcCccHhhHhcccccCCCceEEEeeech------HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence 479999999999999999999999999999999853 35677999999999999999999999998764 4678
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+|+||+.+.+.... ...|+...++.++.+++.||.|||+.||.|||+||.|++++. +.
T Consensus 112 LiFE~v~n~Dfk~l--------------------y~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh--~~ 169 (338)
T KOG0668|consen 112 LIFEYVNNTDFKQL--------------------YPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDH--EL 169 (338)
T ss_pred hHhhhhccccHHHH--------------------hhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeech--hh
Confidence 99999987665332 256788999999999999999999999999999999999996 56
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccccchhcc--cCCCCCCchhhHHHHHHHHHhCCCCCCC-CChhHHHHHHHh-
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLR- 329 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwSlG~il~el~tg~~Pf~~-~~~~~~~~~i~~- 329 (577)
..++|+|+|+|.+..++..++..+.+..|.-||.+- ..+...-|+|||||+|..|+..+.||.. .+..+.+-+|.+
T Consensus 170 rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakV 249 (338)
T KOG0668|consen 170 RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKV 249 (338)
T ss_pred ceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHH
Confidence 789999999999999999999999999999999875 4567889999999999999999999854 333333322211
Q ss_pred ----------------CCC-------CCCCCCCC---------CCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 330 ----------------NKP-------DFRRKPWP---------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 330 ----------------~~~-------~~~~~~~~---------~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
-.+ ...+.+|. -+++++.+|+.++|.+|..+|+||.|++.||||....
T Consensus 250 LGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~ 329 (338)
T KOG0668|consen 250 LGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVR 329 (338)
T ss_pred hChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHH
Confidence 001 11222232 1568999999999999999999999999999998643
No 320
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=2.6e-39 Score=327.92 Aligned_cols=250 Identities=23% Similarity=0.323 Sum_probs=196.1
Q ss_pred CCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCCCchhHH
Q 008127 108 QFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDR 187 (577)
Q Consensus 108 ~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~ 187 (577)
++|.||++++..+++.||||++..... .......+.+|+.+++.+. ||||+++++++...+..|++|||+++|+|.++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~Ei~~l~~l~-h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~ 89 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSC-SKEDLKLLQQEIITSRQLQ-HPNILPYVTSFIVDSELYVVSPLMAYGSCEDL 89 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEecccc-chhHHHHHHHHHHHHHhcC-CcchhhhhheeecCCeEEEEEeccCCCCHHHH
Confidence 445566666677999999999876532 2345678999999999995 99999999999999999999999999999887
Q ss_pred HHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCccc
Q 008127 188 ILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267 (577)
Q Consensus 188 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~ 267 (577)
+... ....+++..++.++.||+.||.|||+++|+||||||+||+++ .++.+||+|||.+...
T Consensus 90 l~~~---------------~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~---~~~~~kl~d~~~~~~~ 151 (314)
T cd08216 90 LKTH---------------FPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLS---GDGKVVLSGLRYSVSM 151 (314)
T ss_pred HHHh---------------cccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEe---cCCceEEecCccceee
Confidence 7533 224588999999999999999999999999999999999998 4688999999988654
Q ss_pred CCCCC--------ccccccCCccccchhccc---CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC--
Q 008127 268 KPGKK--------FQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF-- 334 (577)
Q Consensus 268 ~~~~~--------~~~~~gt~~y~aPE~~~~---~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~-- 334 (577)
..... .....++..|+|||++.+ .++.++|||||||++|+|++|..||..............+....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 231 (314)
T cd08216 152 IKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLL 231 (314)
T ss_pred ccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCcccc
Confidence 32111 123467888999999865 36789999999999999999999997765443332222211100
Q ss_pred -----CC-----------------------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 335 -----RR-----------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 335 -----~~-----------------------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
+. .....++.++.+|+.+||..||++|||+.++|+||||+...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 232 DKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred ccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 00 00012345788999999999999999999999999998654
No 321
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=5.8e-39 Score=318.33 Aligned_cols=254 Identities=19% Similarity=0.284 Sum_probs=202.4
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCC--EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc------C
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGD--RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED------D 169 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~--~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~------~ 169 (577)
|.+++.||+|+||.||+|.+..++. .||+|.+..... .....+.+.+|+.+++.+ +||||+++++++.. .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 78 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC-TRSEMEDFLSEAVCMKEF-DHPNVMRLIGVCLQTVESEGY 78 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcC-CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEccCCcccCC
Confidence 3567889999999999999877775 689998865422 234567789999999999 59999999997642 2
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
...++||||+++|+|.+++..... ......+++..+..++.||+.||.|||+++|+||||||+|||++
T Consensus 79 ~~~~~v~e~~~~~~l~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~- 146 (272)
T cd05075 79 PSPVVILPFMKHGDLHSFLLYSRL-----------GDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLN- 146 (272)
T ss_pred CCcEEEEEeCCCCcHHHHHHHhcc-----------cCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEc-
Confidence 357899999999999887643210 01224589999999999999999999999999999999999997
Q ss_pred CCCCCCeeEEecCCCcccCCCCCc---cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 324 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~ 324 (577)
.++.+||+|||+++........ ....+++.|+|||.+.+ .++.++|||||||++|+|++ |..||.+....+..
T Consensus 147 --~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~ 224 (272)
T cd05075 147 --ENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIY 224 (272)
T ss_pred --CCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 4788999999999876433221 12346678999998865 45889999999999999999 89999887777766
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
..+..+... ...+.++..+.++|.+||..||++|||+.+++++
T Consensus 225 ~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 225 DYLRQGNRL---KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred HHHHcCCCC---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 666554321 1224678899999999999999999999999763
No 322
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=7.4e-39 Score=318.91 Aligned_cols=248 Identities=23% Similarity=0.303 Sum_probs=201.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCC----EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGD----RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~----~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
.+|++.+.||.|+||.||+|.+..+|. .||+|.+.... .......+.+|+.++..+ +||||+++++++... .
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~-~ 82 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGV-GSPYVCRLLGICLTS-T 82 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhc-CCCCCceEEEEEcCC-C
Confidence 468999999999999999999877776 48999886543 234456788999999998 599999999988754 4
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.++++||+++|+|.+.+... ...+++..+..++.||+.||.|||+++|+||||||+|||++
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~----------------~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~--- 143 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVREN----------------KDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVK--- 143 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhc----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc---
Confidence 78999999999998876432 35689999999999999999999999999999999999997
Q ss_pred CCCCeeEEecCCCcccCCCCCc---cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
.++.+||+|||+++........ ....+++.|+|||.+.+ .++.++|||||||++|||++ |..||...........
T Consensus 144 ~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~ 223 (279)
T cd05109 144 SPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDL 223 (279)
T ss_pred CCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 4678999999999876432221 12235678999998754 46889999999999999998 8999977666555544
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+..... . ...+.++..+.+++.+||..||++||++.+++.
T Consensus 224 ~~~~~~-~--~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 224 LEKGER-L--PQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred HHCCCc-C--CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 443321 1 223467899999999999999999999999984
No 323
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=6.8e-39 Score=315.36 Aligned_cols=252 Identities=25% Similarity=0.361 Sum_probs=208.3
Q ss_pred eeecccCCeEEEEEEEcCC---CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEec
Q 008127 102 KLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~---~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~ 178 (577)
+.||+|+||.||+|.+... +..||+|.+...... .....+.+|+.+++.+. ||||+++++++.....+++||||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e~ 77 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASE--EERKDFLKEARVMKKLG-HPNVVRLLGVCTEEEPLYLVLEY 77 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccch--hHHHHHHHHHHHHhhcC-CCChheeeeeecCCCceEEEEEe
Confidence 3699999999999998866 889999998765432 24678899999999995 99999999999999999999999
Q ss_pred cCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeE
Q 008127 179 CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 258 (577)
Q Consensus 179 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl 258 (577)
+++++|.+++....... .......+++..++.++.|++.||.|||++||+||||||+||+++ .++.+||
T Consensus 78 ~~~~~L~~~l~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~---~~~~~~l 146 (262)
T cd00192 78 MEGGDLLDYLRKSRPVF--------PSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVG---EDLVVKI 146 (262)
T ss_pred ccCCcHHHHHhhccccc--------cccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEEC---CCCcEEE
Confidence 99999998775320000 001136789999999999999999999999999999999999998 4689999
Q ss_pred EecCCCcccCCCC---CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCC
Q 008127 259 TDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 259 ~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+|||.+....... ......+++.|+|||.+.. .++.++|||||||++|+|++ |..||......+....+.....
T Consensus 147 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~- 225 (262)
T cd00192 147 SDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYR- 225 (262)
T ss_pred cccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-
Confidence 9999998765432 2334567889999998765 56889999999999999999 6999988877777777665322
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
......++.++.+++.+||..+|.+|||+.+++++
T Consensus 226 --~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 226 --LPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred --CCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 12224578999999999999999999999999875
No 324
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-38 Score=323.30 Aligned_cols=266 Identities=21% Similarity=0.311 Sum_probs=207.9
Q ss_pred ccceeeeeeecccCCeEEEEEEEcC-------CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKA-------NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 167 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~-------~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 167 (577)
..+|.+.+.||+|+||.||+|.+.. ....||+|.+.... .......+.+|+.+++++.+||||+++++++.
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLGVCT 88 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence 3579999999999999999997632 34579999886542 23346678899999999966999999999999
Q ss_pred cCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 168 DDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 168 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
..+.+|+||||+++|+|.+++........ .............++...+..++.||+.||.|||++||+||||||+|||+
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill 167 (314)
T cd05099 89 QEGPLYVIVEYAAKGNLREFLRARRPPGP-DYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLV 167 (314)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCCcc-cccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEE
Confidence 99999999999999999998865311000 00000001123468899999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDG 322 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~ 322 (577)
+ .++.+||+|||+++....... .....++..|+|||++.+ .++.++|||||||++|+|++ |..||.+....+
T Consensus 168 ~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~ 244 (314)
T cd05099 168 T---EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE 244 (314)
T ss_pred c---CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 8 478899999999986543221 112234567999998765 45889999999999999999 899998887777
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 323 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 323 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+..+..... ......++.++.+++.+||..+|.+|||+.++++
T Consensus 245 ~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 245 LFKLLREGHR---MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHHHHHcCCC---CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 7766654321 1122457889999999999999999999999875
No 325
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=7e-39 Score=315.64 Aligned_cols=247 Identities=26% Similarity=0.354 Sum_probs=202.3
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.++|++.+.||+|+||.||+|.+. .+..||+|.+..... ..+.+.+|+.+++++ +||||+++++++. ....|+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l-~~~~i~~~~~~~~-~~~~~l 77 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM----SPESFLEEAQIMKKL-RHDKLVQLYAVVS-EEPIYI 77 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC----CHHHHHHHHHHHHhc-CCCceEEEEeEEC-CCCcEE
Confidence 357999999999999999999865 566799999876543 245689999999999 5999999999875 456889
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+++... ....+++..+..++.|++.||.|||+.+|+||||||+||+++ .++
T Consensus 78 v~e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~---~~~ 139 (260)
T cd05070 78 VTEYMSKGSLLDFLKDG---------------EGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG---DGL 139 (260)
T ss_pred EEEecCCCcHHHHHHhc---------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEe---CCc
Confidence 99999999999877432 234688999999999999999999999999999999999998 477
Q ss_pred CeeEEecCCCcccCCCCC--ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhC
Q 008127 255 SLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~ 330 (577)
.++|+|||++........ .....++..|+|||.+.+ .++.++||||||+++|+|++ |..||.+....+....+...
T Consensus 140 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~ 219 (260)
T cd05070 140 VCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG 219 (260)
T ss_pred eEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence 899999999976543221 122345668999998764 46889999999999999999 99999887777777666543
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.. .......+..+.+|+.+||..+|.+|||+.++++
T Consensus 220 ~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 220 YR---MPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred CC---CCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 21 1222457889999999999999999999998864
No 326
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3.4e-39 Score=330.93 Aligned_cols=268 Identities=24% Similarity=0.285 Sum_probs=203.4
Q ss_pred cceeeeeeecccCCeEEEEEEE-----cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-C
Q 008127 96 RRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-D 169 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~-----~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~ 169 (577)
++|++.+.||+|+||.||+|.+ ..+++.||||.+..... ......+.+|+.++.++.+||||+++++++.. +
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC--hHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 4799999999999999999984 35678999999865432 23456788999999999779999999998765 4
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhh--------------hhHH---------------------------------
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLT--------------SAWF--------------------------------- 202 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~--------------~~~~--------------------------------- 202 (577)
..+++|||||++|+|.+++.......... ..+.
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 56899999999999999886532100000 0000
Q ss_pred ---HhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCC---cccc
Q 008127 203 ---LAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDI 276 (577)
Q Consensus 203 ---~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~---~~~~ 276 (577)
........++...+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++........ ....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 241 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGDA 241 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEc---CCCcEEEEecccccccccCcchhhcCCC
Confidence 0000123578899999999999999999999999999999999998 478899999999976532221 1123
Q ss_pred ccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcc
Q 008127 277 VGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 354 (577)
Q Consensus 277 ~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l 354 (577)
.+++.|+|||++.+ .++.++|||||||++|+|++ |..||............+........+ ...++++.+++..||
T Consensus 242 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~cl 319 (343)
T cd05103 242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP--DYTTPEMYQTMLDCW 319 (343)
T ss_pred CCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCC--CCCCHHHHHHHHHHc
Confidence 45678999998754 46889999999999999997 999997765443333333332222221 236789999999999
Q ss_pred ccCcCCCCCHHHHhcC
Q 008127 355 VKDPRARLTAAQALSH 370 (577)
Q Consensus 355 ~~dP~~Rpt~~~il~h 370 (577)
..||.+|||+.++++|
T Consensus 320 ~~~p~~Rps~~eil~~ 335 (343)
T cd05103 320 HGEPSQRPTFSELVEH 335 (343)
T ss_pred cCChhhCcCHHHHHHH
Confidence 9999999999999875
No 327
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.4e-39 Score=323.50 Aligned_cols=266 Identities=23% Similarity=0.330 Sum_probs=210.3
Q ss_pred cceeeeeeecccCCeEEEEEEEc-------CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK-------ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~-------~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 168 (577)
.+|.+.+.||+|+||.||+|++. .++..||+|.+.... .......+.+|+.+++.+.+||||+++++++..
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 47999999999999999999753 234579999886432 133457789999999999669999999999999
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
.+.+|+||||+++|+|.+++....... ..............++...++.++.||+.||.|||++||+||||||+|||++
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~ 171 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPG-MEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVT 171 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcc-cccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEc
Confidence 999999999999999999886542110 0000001111234688899999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 323 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~ 323 (577)
.++.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+.+..+.
T Consensus 172 ---~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~ 248 (304)
T cd05101 172 ---ENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 248 (304)
T ss_pred ---CCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence 478899999999986643221 123346778999998765 46889999999999999998 8899988887777
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
...+...... .....++..+.+|+.+||..+|.+|||+.++++.
T Consensus 249 ~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 249 FKLLKEGHRM---DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHHHHcCCcC---CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 7766544321 1224678999999999999999999999999873
No 328
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-39 Score=353.47 Aligned_cols=256 Identities=23% Similarity=0.353 Sum_probs=216.5
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCC-----CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANG-----DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~-----~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
...-.+.+.||+|+||.||.|...... ..||||.+.+.. ......+|.+|..+|+.+ +|||||+++|++.+.
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~--~~~~~~~Fl~Ea~~m~~f-~HpNiv~liGv~l~~ 767 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS--SEQEVSDFLKEALLMSKF-DHPNIVSLIGVCLDS 767 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC--CHHHHHHHHHHHHHHhcC-CCcceeeEEEeecCC
Confidence 346788899999999999999865432 248999886553 456788999999999999 699999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
+..+|++|||+||+|..+|........ ....++..+.+.++.||+.|++||+++++|||||-..|+||+
T Consensus 768 ~~~~i~leyM~gGDL~sflr~~r~~~~----------~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~- 836 (1025)
T KOG1095|consen 768 GPPLILLEYMEGGDLLSFLRESRPAPF----------QPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLD- 836 (1025)
T ss_pred CCcEEEehhcccCcHHHHHHhcccccC----------CCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeec-
Confidence 999999999999999999876422111 246799999999999999999999999999999999999999
Q ss_pred CCCCCCeeEEecCCCcccCCCCCcc---ccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 324 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~~---~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~ 324 (577)
+...|||+|||+|+.+-....+. ...-...|||||.+. +.++.++|||||||+|||++| |..||.+.+..+++
T Consensus 837 --~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~ 914 (1025)
T KOG1095|consen 837 --ERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVL 914 (1025)
T ss_pred --ccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHH
Confidence 46899999999999654333221 112335799999886 678999999999999999999 99999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
..++.+. . ..+++.++..+.++|..||+.+|++||++..|++
T Consensus 915 ~~~~~gg-R--L~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 915 LDVLEGG-R--LDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred HHHHhCC-c--cCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 8888876 3 3334678999999999999999999999999988
No 329
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=8e-39 Score=320.71 Aligned_cols=263 Identities=22% Similarity=0.310 Sum_probs=207.0
Q ss_pred cceeeeeeecccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
.+|.+.+.||+|+||.||+|.+. .++..+|+|.+.... ......+.+|+.+++++ +||||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 80 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT---LAARKDFQREAELLTNL-QHEHIVKFYGVCGDGD 80 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc---HHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCC
Confidence 46899999999999999999754 345678999875443 23446788999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
..++||||+++++|.+++......... ............+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~-- 157 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMI-LVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG-- 157 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCccccc-ccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc--
Confidence 999999999999999988643110000 00000011234589999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
.++.+||+|||++........ .....+++.|+|||.+.+ .++.++|||||||++|+|++ |..||......+...
T Consensus 158 -~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~ 236 (291)
T cd05094 158 -ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIE 236 (291)
T ss_pred -cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 478999999999976543221 123456888999998764 45889999999999999998 999998877777666
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+..+.... .....+..+.+++.+||..+|.+|||+.++++
T Consensus 237 ~~~~~~~~~---~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 237 CITQGRVLE---RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred HHhCCCCCC---CCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 655443221 22346889999999999999999999999865
No 330
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=7.7e-39 Score=318.98 Aligned_cols=262 Identities=20% Similarity=0.295 Sum_probs=207.5
Q ss_pred cceeeeeeecccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
++|.+.++||+|+||.||+|... .++..+|+|.+.... ......+.+|+++++.+ +||||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 80 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTVL-QHQHIVRFYGVCTEGR 80 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC---HHHHHHHHHHHHHHhcC-CCCCCceEEEEEecCC
Confidence 46888999999999999999743 356789999876543 34567899999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
..++||||+++|+|.+++.......... ..........+++..++.++.||+.||.|||+.||+||||||+|||++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~-- 156 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKIL--AGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVG-- 156 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhh--cccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEc--
Confidence 9999999999999999886432110000 000011124588999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
+++.+||+|||++........ .....+++.|+|||.+.+ .++.++|||||||++|+|++ |.+||......+...
T Consensus 157 -~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 235 (280)
T cd05092 157 -QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIE 235 (280)
T ss_pred -CCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHH
Confidence 478899999999875533221 123345788999998764 45889999999999999998 999998877777766
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+...... .....+++.+.+||.+||+.||.+||++.++++
T Consensus 236 ~~~~~~~~---~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 236 CITQGREL---ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred HHHcCccC---CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 66554322 122457899999999999999999999999875
No 331
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-40 Score=332.83 Aligned_cols=316 Identities=22% Similarity=0.321 Sum_probs=239.3
Q ss_pred CCCCccccchhHHHhhhccccCCCCCccchhhHHHHHHHhhhHHHHhhhhcccccccccccCCCCCCCccccccccceee
Q 008127 21 NANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTI 100 (577)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 100 (577)
.+-|+++......+-+.....++.+.....|+|..-+..+.........+.+...--++.|.- ..|... ..+...
T Consensus 197 RVyHYRINt~~dgK~yvt~EsrF~TLaELVHHHStvADGLittLhYPApK~nKptvygvSPn~--DkWEme---RtdItM 271 (1157)
T KOG4278|consen 197 RVYHYRINTDNDGKMYVTQESRFRTLAELVHHHSTVADGLITTLHYPAPKKNKPTVYGVSPNA--DKWEME---RTDITM 271 (1157)
T ss_pred eEEEEEeeccCCccEEEeehhhhhHHHHHHhhccccccceeEeeeccCccCCCCceeeecCCc--chhhcc---chheee
Confidence 344555555555555555555555555556665554444333222222222111111121211 111111 124556
Q ss_pred eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
..+||-|.||.||.|.+++-.-.||||.++...+ ..++|+.|..+|+.+. |||+|+|+++|..+..+|||+|||.
T Consensus 272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM----eveEFLkEAAvMKeik-HpNLVqLLGVCT~EpPFYIiTEfM~ 346 (1157)
T KOG4278|consen 272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLLGVCTHEPPFYIITEFMC 346 (1157)
T ss_pred eeccCCCcccceeeeeeeccceeeehhhhhhcch----hHHHHHHHHHHHHhhc-CccHHHHhhhhccCCCeEEEEeccc
Confidence 7789999999999999999999999999976654 6789999999999995 9999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
.|+|+++|... ....++.-..++++.||..|++||..+++|||||-..|+|+. ++..||++|
T Consensus 347 yGNLLdYLRec---------------nr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVg---EnhiVKvAD 408 (1157)
T KOG4278|consen 347 YGNLLDYLREC---------------NRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHIVKVAD 408 (1157)
T ss_pred CccHHHHHHHh---------------chhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccc---ccceEEeec
Confidence 99999999765 334566777889999999999999999999999999999998 689999999
Q ss_pred cCCCcccCCCCCccccccC---Cccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCC
Q 008127 261 FGLSDFIKPGKKFQDIVGS---AYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR 335 (577)
Q Consensus 261 FGla~~~~~~~~~~~~~gt---~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~~~ 335 (577)
|||++++.. ..+....|. .-|.|||.+. ..++.++|||+|||+|||+.| |..||.+-+...+|..+-++ |+
T Consensus 409 FGLsRlMtg-DTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkg---yR 484 (1157)
T KOG4278|consen 409 FGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKG---YR 484 (1157)
T ss_pred cchhhhhcC-CceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcc---cc
Confidence 999998864 344444453 4599999775 567999999999999999998 99999998887777655443 23
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHh
Q 008127 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368 (577)
Q Consensus 336 ~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il 368 (577)
......+++.+.+|+..||+++|.+||++.++-
T Consensus 485 M~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiH 517 (1157)
T KOG4278|consen 485 MDGPEGCPPKVYELMRACWNWSPSDRPSFAEIH 517 (1157)
T ss_pred ccCCCCCCHHHHHHHHHHhcCCcccCccHHHHH
Confidence 334478999999999999999999999998874
No 332
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.2e-38 Score=317.41 Aligned_cols=248 Identities=21% Similarity=0.306 Sum_probs=198.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCC----EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGD----RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~----~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
.+|++.+.||+|+||.||+|.+..+|. .||+|.+.... .......+..|+.++.++ +||||+++++++.. ..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l-~h~~iv~~~~~~~~-~~ 82 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS--GRQTFQEITDHMLAMGSL-DHAYIVRLLGICPG-AS 82 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc--chHHHHHHHHHHHHHhcC-CCCCcceEEEEECC-Cc
Confidence 368999999999999999999887776 47777764322 123456778888888888 59999999998764 45
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.++|+||+++|+|.+++... ...+++..+..++.||+.||.|||+.+++||||||+|||++
T Consensus 83 ~~~i~e~~~~gsL~~~l~~~----------------~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~--- 143 (279)
T cd05111 83 LQLVTQLSPLGSLLDHVRQH----------------RDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLK--- 143 (279)
T ss_pred cEEEEEeCCCCcHHHHHHhc----------------ccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc---
Confidence 78899999999999877532 35689999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
.++.+||+|||+++....... .....++..|+|||.+. +.++.++|||||||++|||++ |..||.+.........
T Consensus 144 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~ 223 (279)
T cd05111 144 SDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDL 223 (279)
T ss_pred CCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 478899999999986543221 23345778899999875 456899999999999999998 9999988766654444
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+..+. .... ....+..+.+++.+||..||.+|||+.++++
T Consensus 224 ~~~~~-~~~~--~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 224 LEKGE-RLAQ--PQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred HHCCC-cCCC--CCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 43322 2221 2335678999999999999999999999866
No 333
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.2e-38 Score=315.62 Aligned_cols=248 Identities=24% Similarity=0.386 Sum_probs=204.9
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCC---EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~---~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
+|++.+.||+|+||.||+|.++.+++ .||||.+.... .......+..|+.+++.+ +||||+++++++..++.++
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~ 81 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSRPVM 81 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhC-CCcCcceEEEEECCCCceE
Confidence 58999999999999999999887665 59999886532 234567899999999999 5999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+||||+++|+|.+++... ...++...++.++.|++.||.|||++|++||||||+||+++ .+
T Consensus 82 lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~---~~ 142 (269)
T cd05065 82 IITEFMENGALDSFLRQN----------------DGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVN---SN 142 (269)
T ss_pred EEEecCCCCcHHHHHhhC----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEc---CC
Confidence 999999999998866432 35688999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCCCCc---cccc---cCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 254 SSLKATDFGLSDFIKPGKKF---QDIV---GSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~---~~~~---gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
+.+||+|||++......... .... ++..|+|||.+.+ .++.++|||||||++|||++ |..||+.....+...
T Consensus 143 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~ 222 (269)
T cd05065 143 LVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIN 222 (269)
T ss_pred CcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHH
Confidence 88999999998765432211 1111 2457999998764 45889999999999999886 999999887777766
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+... ...+..+.++..+.+++.+||..+|.+||++.+++.
T Consensus 223 ~i~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 223 AIEQD---YRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred HHHcC---CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 66433 122223567889999999999999999999999975
No 334
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=3.9e-39 Score=317.40 Aligned_cols=256 Identities=27% Similarity=0.457 Sum_probs=208.4
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEeccccc--CchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM--ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
+|.+.+.||.|+||.||++.+..++..+++|.+..... ........+..|+.+++.+ +||||+++++++.+....++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 79 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKL-DHPAIVKFHASFLERDAFCI 79 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhC-CCCcHHHHHHHHhcCCceEE
Confidence 58999999999999999999988877777776543221 1122334567899999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+.+... ......+++..++.++.|++.||.|||+.|++|+||||+||+++ ++
T Consensus 80 v~e~~~~~~l~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~----~~ 142 (260)
T cd08222 80 ITEYCEGRDLDCKLEEL-------------KHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK----NN 142 (260)
T ss_pred EEEeCCCCCHHHHHHHH-------------hhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee----cC
Confidence 99999999998877432 11346789999999999999999999999999999999999997 35
Q ss_pred CeeEEecCCCcccCCCCC-ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 255 SLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
.+||+|||++........ .....|++.|+|||.+.+ .++.++|+||||+++|+|++|..||.+.........+..+..
T Consensus 143 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 222 (260)
T cd08222 143 LLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPT 222 (260)
T ss_pred CEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCC
Confidence 699999999876643322 234568999999998764 357789999999999999999999987766666666554322
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.. ....++.++.++|.+||..+|.+||++.++++||||
T Consensus 223 ~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 223 PS---LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred CC---CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 21 123577899999999999999999999999999997
No 335
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.3e-38 Score=312.89 Aligned_cols=243 Identities=23% Similarity=0.348 Sum_probs=201.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEE-EcCCeEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF-EDDNYVYI 174 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~-~~~~~~~l 174 (577)
.+|++.+.||+|+||.||++.. .|..||+|.+.... ..+.+.+|+.+++++ +|||++++++++ ...+.+|+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~-----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~l 77 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYI 77 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCc-----hHHHHHHHHHHHHhC-CCCCeeeEEEEEEcCCCceEE
Confidence 3689999999999999999964 47889999885432 345688999999999 599999999975 45667999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+++... ....+++..+..++.||+.||.|||++||+||||||+||+++ .++
T Consensus 78 v~e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~---~~~ 139 (256)
T cd05082 78 VTEYMAKGSLVDYLRSR---------------GRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVS---EDN 139 (256)
T ss_pred EEECCCCCcHHHHHHhc---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEc---CCC
Confidence 99999999999877533 224578999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCC
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
.+||+|||++....... ....++..|+|||++.+. ++.++|||||||++|+|++ |+.||......+....+..+..
T Consensus 140 ~~kl~dfg~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~ 217 (256)
T cd05082 140 VAKVSDFGLTKEASSTQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK 217 (256)
T ss_pred cEEecCCccceeccccC--CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC
Confidence 99999999987654322 233456789999987654 5889999999999999997 9999988777776666654422
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
....+.+++.+.+++.+||..+|.+|||+.++++
T Consensus 218 ---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 218 ---MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred ---CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 2223567899999999999999999999999975
No 336
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.4e-38 Score=312.91 Aligned_cols=241 Identities=21% Similarity=0.295 Sum_probs=195.9
Q ss_pred eecccCCeEEEEEEEc--CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 103 LLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 103 ~lG~G~fg~V~~~~~~--~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
.||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.+++++ +||||+++++++.. ..+++||||++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~-~~~~lv~e~~~ 77 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQL-DNPYIVRMIGVCEA-EALMLVMEMAS 77 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhc-CCCCeEEEEEEEcC-CCeEEEEEeCC
Confidence 3899999999999765 445679999886542 234456789999999999 59999999998864 46899999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
+|+|.+++... ...+++..++.++.||+.||.|||++|++||||||+|||++ .++.+||+|
T Consensus 78 ~~~L~~~l~~~----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~d 138 (257)
T cd05115 78 GGPLNKFLSGK----------------KDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLV---NQHYAKISD 138 (257)
T ss_pred CCCHHHHHHhC----------------CCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEc---CCCcEEecc
Confidence 99998876422 35689999999999999999999999999999999999998 478899999
Q ss_pred cCCCcccCCCCCc----cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCC
Q 008127 261 FGLSDFIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 261 FGla~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
||++......... ....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+....+..+...
T Consensus 139 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~- 217 (257)
T cd05115 139 FGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRL- 217 (257)
T ss_pred CCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC-
Confidence 9999765433221 11233578999998764 45889999999999999996 99999888777776666554321
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
...+..++++.++|.+||..+|++||++.++++
T Consensus 218 --~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 218 --DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred --CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 122457899999999999999999999999865
No 337
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.4e-38 Score=313.60 Aligned_cols=246 Identities=25% Similarity=0.351 Sum_probs=201.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||.|+||.||+|.+..+ ..+|+|.+..... ..+.+.+|+.+++.+ +||||+++++++.. +..|+|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-~~~~~v 78 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM----MPEAFLQEAQIMKKL-RHDKLVPLYAVVSE-EPIYIV 78 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc----cHHHHHHHHHHHHhC-CCCCeeeEEEEEcC-CCcEEE
Confidence 5799999999999999999987654 4699998765432 345688999999999 59999999998754 568899
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++|+|.+++... ....+++..+..++.||+.||.|||+.||+||||||+||+++ .++.
T Consensus 79 ~e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~---~~~~ 140 (260)
T cd05069 79 TEFMGKGSLLDFLKEG---------------DGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVG---DNLV 140 (260)
T ss_pred EEcCCCCCHHHHHhhC---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc---CCCe
Confidence 9999999999877532 234578899999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCCC--ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~ 331 (577)
++|+|||++........ .....++..|+|||.+.+ .++.++|||||||++|+|++ |..||.+....+....+....
T Consensus 141 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~ 220 (260)
T cd05069 141 CKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGY 220 (260)
T ss_pred EEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence 99999999976543221 123346778999998764 46889999999999999999 999998887777776665432
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
. ......++..+.+++.+||..||.+||++.++++
T Consensus 221 ~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 221 R---MPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred C---CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 1 1223467899999999999999999999999875
No 338
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=4.7e-39 Score=320.55 Aligned_cols=254 Identities=30% Similarity=0.508 Sum_probs=208.5
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
|++.+.||.|+||.||+|.+..+++.||+|.+..... .......+..|+.+++.+. ||||+++++++...+.+++|||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~e 78 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNE-EEGIPSTALREISLLKELK-HPNIVKLLDVIHTERKLYLVFE 78 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccc-cccccHHHHHHHHHHHhcC-CCCHHHHHhhhhcCCceEEEec
Confidence 5677889999999999999999999999999876531 1233466788999999995 9999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
|++ ++|.+.+... ...+++..+..++.|++.||.|||++||+||||+|+||+++ .++.+|
T Consensus 79 ~~~-~~l~~~i~~~----------------~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~---~~~~~~ 138 (282)
T cd07829 79 YCD-MDLKKYLDKR----------------PGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILIN---RDGVLK 138 (282)
T ss_pred CcC-cCHHHHHHhh----------------ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEc---CCCCEE
Confidence 997 5888877532 14689999999999999999999999999999999999998 478999
Q ss_pred EEecCCCcccCCCC-CccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC--
Q 008127 258 ATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP-- 332 (577)
Q Consensus 258 l~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~-- 332 (577)
|+|||++....... ......++..|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+.+..+.....
T Consensus 139 l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (282)
T cd07829 139 LADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTP 218 (282)
T ss_pred EecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCC
Confidence 99999997664332 2334567888999998754 458899999999999999999999988776655544432110
Q ss_pred ----------------CCC-------CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 333 ----------------DFR-------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 333 ----------------~~~-------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.++ ...++.++..+.++|.+||..||.+||++.+++.||||
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 219 TEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred cHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 000 01234567889999999999999999999999999998
No 339
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.1e-39 Score=348.99 Aligned_cols=254 Identities=31% Similarity=0.484 Sum_probs=198.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-------
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED------- 168 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~------- 168 (577)
.+|+.++.||+||||.||+|+++-+|+.||||+|.... .......+.+|+.+|.+| +|||||++|..|.+
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArL-nHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARL-NHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhc-CCcceeeeehhhhccCCcccc
Confidence 46788999999999999999999999999999997654 345667789999999999 69999999765400
Q ss_pred --------------------------------------------------------------------------------
Q 008127 169 -------------------------------------------------------------------------------- 168 (577)
Q Consensus 169 -------------------------------------------------------------------------------- 168 (577)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ------------------------C--------CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCC-CHHH
Q 008127 169 ------------------------D--------NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY-TEKD 215 (577)
Q Consensus 169 ------------------------~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l-~~~~ 215 (577)
+ -.+||-||||+...|.+.+.++ ... ....
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N-----------------~~~~~~d~ 698 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRN-----------------HFNSQRDE 698 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhc-----------------ccchhhHH
Confidence 0 1478889999876665555433 222 3567
Q ss_pred HHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccC-------------------CCCCcccc
Q 008127 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-------------------PGKKFQDI 276 (577)
Q Consensus 216 ~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~-------------------~~~~~~~~ 276 (577)
+++++.+|++||.|+|++|||||||||.||+|+ .+..|||+|||+|+... +....+..
T Consensus 699 ~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd---~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~ 775 (1351)
T KOG1035|consen 699 AWRLFREILEGLAYIHDQGIIHRDLKPRNIFLD---SRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQ 775 (1351)
T ss_pred HHHHHHHHHHHHHHHHhCceeeccCCcceeEEc---CCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccc
Confidence 899999999999999999999999999999999 47889999999998621 01134567
Q ss_pred ccCCccccchhccc----CCCCCCchhhHHHHHHHHHhCCCCCCCCCh-hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHH
Q 008127 277 VGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 351 (577)
Q Consensus 277 ~gt~~y~aPE~~~~----~~~~~~DiwSlG~il~el~tg~~Pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 351 (577)
+||..|+|||++.+ .|+.|+|||||||||+||+. ||....+ ..++..+..+..+.+...+..--+.-..+|.
T Consensus 776 VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~ 852 (1351)
T KOG1035|consen 776 VGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIR 852 (1351)
T ss_pred cceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHH
Confidence 89999999999863 57899999999999999996 5744333 3344444444333332222223345679999
Q ss_pred HccccCcCCCCCHHHHhcCccccc
Q 008127 352 KLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 352 ~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
.||..||.+||||.++|++.||-.
T Consensus 853 ~Ll~hdP~kRPtA~eLL~s~llpp 876 (1351)
T KOG1035|consen 853 WLLSHDPSKRPTATELLNSELLPP 876 (1351)
T ss_pred HHhcCCCccCCCHHHHhhccCCCc
Confidence 999999999999999999999975
No 340
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.9e-38 Score=312.63 Aligned_cols=248 Identities=25% Similarity=0.382 Sum_probs=206.2
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.++|.+.+.||+|+||.||+|.+. .++.||||.+..... ..+.+.+|+.+++.+ +||||+++++++......++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 78 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM----SPEAFLQEAQIMKKL-RHDKLVQLYAVCSEEEPIYI 78 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc----CHHHHHHHHHHHhhC-CCCCEeeeeeeeecCCceEE
Confidence 357999999999999999999875 557899999876543 346788999999999 49999999999999899999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+++... ....++...+..++.||+.||.|||++|++|+||||+||+++ .++
T Consensus 79 v~e~~~~~~L~~~i~~~---------------~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~---~~~ 140 (261)
T cd05034 79 VTEYMSKGSLLDFLKSG---------------EGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVG---ENL 140 (261)
T ss_pred EEeccCCCCHHHHHhcc---------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEc---CCC
Confidence 99999999998877432 234688999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCC--ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhC
Q 008127 255 SLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~ 330 (577)
.+||+|||++........ .....++..|+|||.+.+ .++.++|||||||++|+|++ |+.||.+......+..+...
T Consensus 141 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~ 220 (261)
T cd05034 141 VCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERG 220 (261)
T ss_pred CEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence 999999999876643211 112234568999998865 45889999999999999998 99999888777777776654
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.. .......+.++.+++.+||..+|.+||++.++++
T Consensus 221 ~~---~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 221 YR---MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred CC---CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 22 1222456889999999999999999999999874
No 341
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.1e-38 Score=311.70 Aligned_cols=241 Identities=22% Similarity=0.312 Sum_probs=197.5
Q ss_pred eeecccCCeEEEEEEEcCCC---CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEec
Q 008127 102 KLLGHGQFGYTYVATDKANG---DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~---~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~ 178 (577)
+.||+|+||.||+|.+..++ ..||+|.+...... .....+.+|+.+++.+ +||||+++++++.. +.+++||||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~-~~~~~v~e~ 76 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQL-DHPCIVRLIGVCKG-EPLMLVMEL 76 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhc-CCCCeeeEEEEEcC-CceEEEEEe
Confidence 46999999999999876554 78999998765432 3456789999999999 59999999998764 468999999
Q ss_pred cCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeE
Q 008127 179 CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 258 (577)
Q Consensus 179 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl 258 (577)
+++|+|.+++... ..+++..+..++.|++.||.|||..+++||||||+|||++ .++.+||
T Consensus 77 ~~~~~L~~~l~~~-----------------~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~---~~~~~kl 136 (257)
T cd05060 77 APLGPLLKYLKKR-----------------REIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLV---NRHQAKI 136 (257)
T ss_pred CCCCcHHHHHHhC-----------------CCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEc---CCCcEEe
Confidence 9999999877432 4689999999999999999999999999999999999998 4788999
Q ss_pred EecCCCcccCCCCCcc----ccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCC
Q 008127 259 TDFGLSDFIKPGKKFQ----DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 259 ~DFGla~~~~~~~~~~----~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+|||++.......... ...++..|+|||.+.+ .++.++|||||||++|+|++ |..||...+..+....+.....
T Consensus 137 ~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~ 216 (257)
T cd05060 137 SDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGER 216 (257)
T ss_pred ccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCc
Confidence 9999998664433211 1223567999998764 45889999999999999998 9999988777666666654432
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
. .....++..+.++|.+||..+|.+|||+.++++
T Consensus 217 ~---~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 217 L---PRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred C---CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 1 223457899999999999999999999999875
No 342
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=1.9e-38 Score=341.85 Aligned_cols=356 Identities=20% Similarity=0.257 Sum_probs=224.7
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCC----CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEE-----
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKAN----GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNA----- 165 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~----~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~----- 165 (577)
.++|.+.+.||+|+||.||+|++..+ +..||||++.... ..+.+..| .+... .+.+++.++..
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~-----~~e~~~~e--~l~~~-~~~~~~~~~~~~~~~~ 202 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG-----AVEIWMNE--RVRRA-CPNSCADFVYGFLEPV 202 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc-----hhHHHHHH--HHHhh-chhhHHHHHHhhhccc
Confidence 35799999999999999999999988 8999999875432 11111111 11222 12233222211
Q ss_pred -EEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhh---HHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCC
Q 008127 166 -FEDDNYVYIAMELCEGGELLDRILAKMISTTLTSA---WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 241 (577)
Q Consensus 166 -~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlK 241 (577)
...+..+++||||+++++|.+.+............ ....+..........+..++.||+.||.|||+++|+|||||
T Consensus 203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLK 282 (566)
T PLN03225 203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVK 282 (566)
T ss_pred ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCC
Confidence 24566799999999999999887643211000000 00011112223455677899999999999999999999999
Q ss_pred CCcEEeecCCCCCCeeEEecCCCcccCCCC--CccccccCCccccchhccc-----------------------CCCCCC
Q 008127 242 PENFLFKSAKEDSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR-----------------------KSGPES 296 (577)
Q Consensus 242 p~NILl~~~~~~~~vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~-----------------------~~~~~~ 296 (577)
|+|||++. .++.+||+|||+|+.+.... .....+||+.|+|||.+.. .+..++
T Consensus 283 P~NILl~~--~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 283 PQNIIFSE--GSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred HHHEEEeC--CCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 99999984 35789999999998654332 2345789999999996532 123456
Q ss_pred chhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC-CCC-----------CCC------CCCCCCCHHHHHHHHHccccCc
Q 008127 297 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN-KPD-----------FRR------KPWPSISNSAKDFVKKLLVKDP 358 (577)
Q Consensus 297 DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~-~~~-----------~~~------~~~~~~s~~~~~li~~~l~~dP 358 (577)
|||||||+||||+++..|+... ...+...+.. ... ... ..+...+....+||.+||++||
T Consensus 361 DVwSlGviL~el~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP 438 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDSN--LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKG 438 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCchH--HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCc
Confidence 9999999999999977665321 1112111111 000 000 0001122345699999999999
Q ss_pred CCCCCHHHHhcCccccccCCCCCCcccHHHHHhhHHhhhhhhhhHHHHHhhccccchHHHhhhccccccccCCCCCCCCH
Q 008127 359 RARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISL 438 (577)
Q Consensus 359 ~~Rpt~~~il~hp~f~~~~~~~~~~~~~~~~~~lk~~~~~s~l~~~~l~~~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~ 438 (577)
.+|||+.++|+||||+....... ..++++.. .. ... ..... .+-.+.+...+..-+++.+|-++.
T Consensus 439 ~kR~ta~e~L~Hpff~~~~~~~~-----~~~~~~~~---~~-~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~e 503 (566)
T PLN03225 439 RQRISAKAALAHPYFDREGLLGL-----SVMQNLRL---QL-FRA-----TQQDY-GEAAAWVVFLMAKSGTEKEGGFTE 503 (566)
T ss_pred ccCCCHHHHhCCcCcCCCCcccc-----cccccccc---cc-chh-----hHHHH-HHHHHHHHHHHHhcCCCCCCCccH
Confidence 99999999999999987654211 11111100 00 000 00000 011223334444557778899999
Q ss_pred HHHHHHHHhhCCCCccHHHHH--HHHHhhcCCCCcceehhhHHH
Q 008127 439 EEMRQALAKDLPWKLKESRVL--EILQAIDCNTDGLVDFSEFVA 480 (577)
Q Consensus 439 ~el~~~l~~~~~~~~~~~~~~--~~~~~~D~d~dg~i~f~EF~~ 480 (577)
.+|..+... + ...+...+ .+....+.+..|..++.+++.
T Consensus 504 ~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (566)
T PLN03225 504 AQLQELREK--E-PKKKGSAQRNALASALRLQRKGVKTVARTVD 544 (566)
T ss_pred HHHHHhhhh--c-CcchhhhhhhhHHHHHhhhhhhhhhhhhhhh
Confidence 999988743 3 22333343 488888999999999999975
No 343
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.4e-38 Score=319.69 Aligned_cols=263 Identities=20% Similarity=0.265 Sum_probs=203.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCC--------------CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANG--------------DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~--------------~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 161 (577)
++|++.+.||+|+||.||+|++..++ ..||+|.+.... .......+.+|+++++++ +||||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l-~h~~i~~ 81 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRL-KNPNIIR 81 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhC-CCCCcCe
Confidence 47999999999999999999875432 358999886542 234556789999999999 5999999
Q ss_pred EEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCC
Q 008127 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 241 (577)
Q Consensus 162 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlK 241 (577)
+++++...+..++||||+++++|.+++......... ........+++..+..++.|++.||.|||++|++|||||
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlk 156 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTF-----THANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLA 156 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccc-----cccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccC
Confidence 999999999999999999999999987543110000 001112347888999999999999999999999999999
Q ss_pred CCcEEeecCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh--CCCCC
Q 008127 242 PENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC--GRRPF 315 (577)
Q Consensus 242 p~NILl~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t--g~~Pf 315 (577)
|+||+++ .++.+||+|||++........ .....++..|+|||++. +.++.++|||||||++|+|++ |..||
T Consensus 157 p~Nill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~ 233 (295)
T cd05097 157 TRNCLVG---NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPY 233 (295)
T ss_pred hhhEEEc---CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCC
Confidence 9999998 467899999999976543221 12234577899999765 456899999999999999988 67888
Q ss_pred CCCChhHHHHHHHhC----CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 316 WDKTEDGIFKEVLRN----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 316 ~~~~~~~~~~~i~~~----~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
...+..+....+... .........+.+++.+.+|+.+||..||.+|||+.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 234 SLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred cccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 776666555444221 111111123457889999999999999999999999965
No 344
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.5e-38 Score=318.60 Aligned_cols=264 Identities=24% Similarity=0.297 Sum_probs=204.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
+|++.+.||+|+||.||+|.+.. ....+|+|.+..... ......+.+|+.+++.+ +||||+++++.+...+.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~ 77 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS--SSELRDLLSEFNLLKQV-NHPHVIKLYGACSQDGP 77 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC--HHHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCC
Confidence 37889999999999999998753 235688888764432 23456789999999999 59999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhh-------hhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCc
Q 008127 172 VYIAMELCEGGELLDRILAKMISTT-------LTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 244 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~N 244 (577)
.++|+||+++|+|.+++........ ..............+++..++.++.|++.||.|||+++|+||||||+|
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~n 157 (290)
T cd05045 78 LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARN 157 (290)
T ss_pred cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhhe
Confidence 9999999999999988754210000 000000111223468899999999999999999999999999999999
Q ss_pred EEeecCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCC
Q 008127 245 FLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKT 319 (577)
Q Consensus 245 ILl~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~ 319 (577)
||++ .++.+||+|||+++....... .....++..|+|||.+.+ .++.++|||||||++|+|++ |..||.+..
T Consensus 158 ill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 234 (290)
T cd05045 158 VLVA---EGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA 234 (290)
T ss_pred EEEc---CCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 9998 477899999999976533221 123356778999998754 45889999999999999998 999998877
Q ss_pred hhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 320 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 320 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
...+...+.... . ......++.++.+|+.+||..+|.+||++.++++
T Consensus 235 ~~~~~~~~~~~~-~--~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 235 PERLFNLLKTGY-R--MERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred HHHHHHHHhCCC-C--CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 766665544322 1 2223457899999999999999999999999865
No 345
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.9e-38 Score=316.71 Aligned_cols=248 Identities=25% Similarity=0.349 Sum_probs=194.1
Q ss_pred cce-eeeeeecccCCeEEEEEE----EcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--
Q 008127 96 RRY-TIGKLLGHGQFGYTYVAT----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-- 168 (577)
Q Consensus 96 ~~y-~~~~~lG~G~fg~V~~~~----~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-- 168 (577)
++| ++.+.||+|+||+||++. ...++..||+|.+..... ......+.+|+++++.+ +||||+++++++..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~ 79 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG--QQNTSGWKKEINILKTL-YHENIVKYKGCCSEQG 79 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC--hHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCC
Confidence 345 999999999999998865 345788999999865421 23456788999999999 59999999998765
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
...+++||||+++|+|.+++.. ..+++..++.++.|++.||.|||++||+||||||+|||++
T Consensus 80 ~~~~~lv~e~~~~~~l~~~~~~------------------~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~ 141 (283)
T cd05080 80 GKGLQLIMEYVPLGSLRDYLPK------------------HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLD 141 (283)
T ss_pred CceEEEEecCCCCCCHHHHHHH------------------cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEc
Confidence 3468999999999999887632 3589999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCC----ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChh--
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED-- 321 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~-- 321 (577)
.++.+||+|||++........ .....++..|+|||++.+ ..+.++|||||||++|+|++|..||......
T Consensus 142 ---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~ 218 (283)
T cd05080 142 ---NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFE 218 (283)
T ss_pred ---CCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhh
Confidence 468899999999987643322 122345677999998764 4688999999999999999999998543211
Q ss_pred H------------HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 322 G------------IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 322 ~------------~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+ ............ .....++.++.+++.+||..+|.+|||+.++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 219 EMIGPKQGQMTVVRLIELLERGMRL--PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred hhhcccccccchhhhhhhhhcCCCC--CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0 011111111111 112356789999999999999999999999985
No 346
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.9e-38 Score=324.39 Aligned_cols=266 Identities=23% Similarity=0.327 Sum_probs=208.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCC-------CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKAN-------GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~-------~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 168 (577)
.+|++++.||+|+||.||+|++... +..||+|.+.... .......+.+|+.+++++.+||||+++++++..
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA--TDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 89 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence 4799999999999999999986432 2368999876432 233567789999999999669999999999999
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
.+.+++||||+++|+|.+++....... ..............++...+..++.||+.||.|||++||+||||||+|||++
T Consensus 90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~ 168 (334)
T cd05100 90 DGPLYVLVEYASKGNLREYLRARRPPG-MDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVT 168 (334)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcc-cccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc
Confidence 999999999999999999886531100 0000000011234588889999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCCc---cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 323 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~ 323 (577)
.++.+||+|||+++........ ....++..|+|||++.+ .++.++|||||||++|+|++ |..||.+.+..+.
T Consensus 169 ---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~ 245 (334)
T cd05100 169 ---EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL 245 (334)
T ss_pred ---CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence 4788999999999765432211 12234567999998765 46889999999999999998 8999988887777
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
...+..... .......+.++.+|+.+||..+|.+|||+.+++++
T Consensus 246 ~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 246 FKLLKEGHR---MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HHHHHcCCC---CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 776655322 11224578899999999999999999999999875
No 347
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.7e-38 Score=312.86 Aligned_cols=249 Identities=22% Similarity=0.351 Sum_probs=204.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCC---EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~---~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.+|+..+.||+|+||.||+|.+..++. .+|+|.+.... .....+.+.+|+.+++.+ +||||+++++++...+..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 81 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQF-SHHNIIRLEGVVTKFKPA 81 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEccCCCc
Confidence 368889999999999999999876665 79999886542 133456789999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+||||+++++|.+++... ...+++..+..++.|++.||.|||+.|++||||||+||+++ .
T Consensus 82 ~lv~e~~~~~~L~~~~~~~----------------~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~---~ 142 (268)
T cd05063 82 MIITEYMENGALDKYLRDH----------------DGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVN---S 142 (268)
T ss_pred EEEEEcCCCCCHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEc---C
Confidence 9999999999998876432 35689999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCCCC--cc--ccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPGKK--FQ--DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~--~~--~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
++.+||+|||++........ .. ....++.|+|||++.+ .++.++|||||||++|+|++ |..||+..+..+....
T Consensus 143 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~ 222 (268)
T cd05063 143 NLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKA 222 (268)
T ss_pred CCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHH
Confidence 77899999999876543221 11 1223457999998764 46889999999999999997 9999988887777777
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+.... ..+....++.++.+++.+||..+|.+||++.++++
T Consensus 223 i~~~~---~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 223 INDGF---RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred HhcCC---CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 65432 12222457889999999999999999999999975
No 348
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=3.1e-38 Score=314.47 Aligned_cols=248 Identities=23% Similarity=0.298 Sum_probs=205.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCC----EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGD----RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~----~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
.+|++.+.||+|+||.||+|.++.+|. .||+|.+..... ......+.+|+.++.++ +||||+++++++.. ..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~ 82 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASV-DHPHVVRLLGICLS-SQ 82 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhC-CCCCcceEEEEEec-Cc
Confidence 479999999999999999999877665 589998765532 34567789999999999 59999999999887 78
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.++||||+++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 83 ~~~v~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~--- 143 (279)
T cd05057 83 VQLITQLMPLGCLLDYVRNH----------------KDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVK--- 143 (279)
T ss_pred eEEEEecCCCCcHHHHHHhc----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEc---
Confidence 99999999999999877532 34589999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCCCcc---ccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~~---~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
.++.+||+|||++.......... ...++..|+|||.+. +.++.++|||||||++|+|++ |+.||.+....++...
T Consensus 144 ~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~ 223 (279)
T cd05057 144 TPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDL 223 (279)
T ss_pred CCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Confidence 47789999999998765333211 122456799999876 456889999999999999998 9999988877777766
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+..+.. ... ....+..+.+++.+||..+|.+|||+.++++
T Consensus 224 ~~~~~~-~~~--~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 224 LEKGER-LPQ--PPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred HhCCCC-CCC--CCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 665432 111 2346788999999999999999999999864
No 349
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=3e-38 Score=310.31 Aligned_cols=244 Identities=24% Similarity=0.363 Sum_probs=203.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||.|+||.||+|.. .|+.||+|.+..... ..+.+.+|+.+++.+ +||||+++++++.+....++|
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v 78 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST----AAQAFLAEASVMTTL-RHPNLVQLLGVVLQGNPLYIV 78 (256)
T ss_pred hhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh----HHHHHHHHHHHHHhc-CCcceeeeEEEEcCCCCeEEE
Confidence 4689999999999999999975 488999999865532 467789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++++|.+++... ....+++..++.++.|++.||.|||++|++||||||+||+++ .++.
T Consensus 79 ~e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~---~~~~ 140 (256)
T cd05039 79 TEYMAKGSLVDYLRSR---------------GRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVS---EDLV 140 (256)
T ss_pred EEecCCCcHHHHHHhc---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEe---CCCC
Confidence 9999999998877433 123689999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+||+|||.+....... ....++..|+|||.+. +.++.++||||||+++|+|++ |..||...+..+....+.....
T Consensus 141 ~~l~d~g~~~~~~~~~--~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~- 217 (256)
T cd05039 141 AKVSDFGLAKEASQGQ--DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYR- 217 (256)
T ss_pred EEEccccccccccccc--ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCC-
Confidence 9999999998763222 2334566799999876 456889999999999999997 9999988777666655544321
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
......+++.+.++|.+||..+|.+|||+.++++
T Consensus 218 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 218 --MEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred --CCCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 1222457899999999999999999999999875
No 350
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=3.5e-38 Score=309.80 Aligned_cols=248 Identities=27% Similarity=0.409 Sum_probs=206.9
Q ss_pred eeeeeeecccCCeEEEEEEEcCCC----CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANG----DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~----~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
+++.+.||.|+||.||+|.+..++ ..||+|.+..... ......+..|+.+++.+ +||||+++++++...+..|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~ 77 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD--EQQIEEFLREARIMRKL-DHPNIVKLLGVCTEEEPLM 77 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC--hHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCCeeE
Confidence 356788999999999999988766 8999999865432 22567889999999999 6999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
++|||+++++|.+.+... ....+++..+..++.||+.||.|||+.+++||||||+||+++ .+
T Consensus 78 ~i~e~~~~~~l~~~~~~~---------------~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~---~~ 139 (258)
T smart00219 78 IVMEYMEGGDLLDYLRKN---------------RPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVG---EN 139 (258)
T ss_pred EEEeccCCCCHHHHHHhh---------------hhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEc---cC
Confidence 999999999998877543 112289999999999999999999999999999999999998 46
Q ss_pred CCeeEEecCCCcccCCCCCcc--ccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008127 254 SSLKATDFGLSDFIKPGKKFQ--DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~--~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~ 329 (577)
+.++|+|||++.......... ...+++.|+|||.+.+ .++.++|||||||++|+|++ |..||...+.......+..
T Consensus 140 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~ 219 (258)
T smart00219 140 LVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKK 219 (258)
T ss_pred CeEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc
Confidence 789999999998765432222 1337789999998754 46889999999999999998 8999988777777777765
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
..... ....++.++.+++.+||..+|.+|||+.++++
T Consensus 220 ~~~~~---~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 220 GYRLP---KPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred CCCCC---CCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 54322 22347899999999999999999999999986
No 351
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=3e-38 Score=317.35 Aligned_cols=262 Identities=19% Similarity=0.250 Sum_probs=203.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcC----------------CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKA----------------NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~----------------~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpni 159 (577)
++|++.+.||.|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.+ +||||
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l-~~~~i 81 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRL-KDPNI 81 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhC-CCCCc
Confidence 579999999999999999986432 34579999886542 233457789999999999 59999
Q ss_pred eEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceecc
Q 008127 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 239 (577)
Q Consensus 160 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrD 239 (577)
+++++++...+.+++||||+++|+|.+++......... .......+++..+..++.||+.||.|||+.||+|||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~d 155 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAA------EKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRD 155 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCccccc------ccccccccCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence 99999999999999999999999999888653211100 011234578899999999999999999999999999
Q ss_pred CCCCcEEeecCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh--CCC
Q 008127 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC--GRR 313 (577)
Q Consensus 240 lKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t--g~~ 313 (577)
|||+|||++ .++.++|+|||++..+..... .....+++.|+|||+.. +.++.++|||||||++|||++ |..
T Consensus 156 lkp~Nili~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~ 232 (296)
T cd05095 156 LATRNCLVG---KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQ 232 (296)
T ss_pred CChheEEEc---CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCC
Confidence 999999998 478899999999986543221 12234567899999754 556899999999999999998 789
Q ss_pred CCCCCChhHHHHHHHh---C-CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 314 PFWDKTEDGIFKEVLR---N-KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 314 Pf~~~~~~~~~~~i~~---~-~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
||...+..+....... . ......+..+.+++.+.+|+.+||..||.+|||+.++++
T Consensus 233 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 233 PYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred CccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9977766555443321 1 111111122457789999999999999999999999865
No 352
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.5e-38 Score=316.59 Aligned_cols=265 Identities=19% Similarity=0.238 Sum_probs=208.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
++|++.+.||.|+||.||+|.+.. ++..||+|.+.... .......+.+|+.++..+ +||||+++++++..+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l-~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEF-DHPNIVKLLGVCAVGK 81 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCC
Confidence 479999999999999999998753 67899999886542 233456789999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhh-----hHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcE
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTS-----AWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 245 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NI 245 (577)
.+++||||+++|+|.+++........... ...........+++..++.++.||+.||.|||+++++||||||+||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ni 161 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNC 161 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhhe
Confidence 99999999999999998864321100000 0000111224578999999999999999999999999999999999
Q ss_pred EeecCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCCh
Q 008127 246 LFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTE 320 (577)
Q Consensus 246 Ll~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~ 320 (577)
+++ .++.+||+|||++........ .....++..|+|||.+. ..++.++|||||||++|+|++ |..||.+...
T Consensus 162 l~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~ 238 (288)
T cd05050 162 LVG---ENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH 238 (288)
T ss_pred Eec---CCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 997 478899999999875432221 12234567799999876 456889999999999999997 8899988887
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+....+..+... ...+.++.++.+||.+||..+|.+|||+.++++
T Consensus 239 ~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 239 EEVIYYVRDGNVL---SCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHHHHHHhcCCCC---CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 7777766554321 112457889999999999999999999999875
No 353
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3.2e-38 Score=312.61 Aligned_cols=248 Identities=20% Similarity=0.282 Sum_probs=192.7
Q ss_pred eecccCCeEEEEEEEcC--CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 103 LLGHGQFGYTYVATDKA--NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 103 ~lG~G~fg~V~~~~~~~--~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
.||+|+||.||+|.... ....+|+|.+.... .......+.+|+.+++.+ +||||+++++.+.....+|+||||++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l-~h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYREL-NHPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhC-CCCCcceEEEEECCCCceEEEEEeCC
Confidence 59999999999996432 44578888875432 233456788999999998 59999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
+|+|.+++..... .....+++..+..++.||+.||.|||+++|+||||||+|||++ .++.+||+|
T Consensus 79 ~g~L~~~l~~~~~------------~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~---~~~~~kl~d 143 (269)
T cd05042 79 LGDLKNYLRSNRG------------MVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLT---ADLSVKIGD 143 (269)
T ss_pred CCcHHHHHHhccc------------cccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEec---CCCcEEEec
Confidence 9999998754310 0123356778899999999999999999999999999999998 478899999
Q ss_pred cCCCcccCCCCC---ccccccCCccccchhccc--------CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHH
Q 008127 261 FGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR--------KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 261 FGla~~~~~~~~---~~~~~gt~~y~aPE~~~~--------~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~ 328 (577)
||++........ .....+++.|+|||++.. .++.++|||||||++|+|++ |..||......+.+..+.
T Consensus 144 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~ 223 (269)
T cd05042 144 YGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVV 223 (269)
T ss_pred cccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHh
Confidence 999865432211 123356778999998742 34778999999999999999 788988777666666554
Q ss_pred hCC-CCCCCCC-CCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 329 RNK-PDFRRKP-WPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 329 ~~~-~~~~~~~-~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
... ...+.+. ...+++.+.+++..|| .||++|||++++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 224 REQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred hccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 432 2222221 2357788999999998 59999999999876
No 354
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=5.2e-38 Score=311.08 Aligned_cols=249 Identities=18% Similarity=0.278 Sum_probs=193.3
Q ss_pred eeecccCCeEEEEEEEc--CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEecc
Q 008127 102 KLLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELC 179 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~--~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 179 (577)
+.||+|+||.||+|... .++..+|+|.+..... ......+.+|+.+++++ +||||+++++++.+...+++||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~ 77 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS--VQEQMKFLEEAQPYRSL-QHSNLLQCLGQCTEVTPYLLVMEFC 77 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCCcEEEEECC
Confidence 35999999999999754 3556899998865432 23345788899999999 5999999999999989999999999
Q ss_pred CCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEE
Q 008127 180 EGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259 (577)
Q Consensus 180 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~ 259 (577)
++|+|.+++..... ......+...+..++.|++.||.|||+.+++||||||+||+++ .++.+||+
T Consensus 78 ~~g~L~~~l~~~~~------------~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~---~~~~~kL~ 142 (269)
T cd05087 78 PLGDLKGYLRSCRK------------AELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLT---ADLTVKIG 142 (269)
T ss_pred CCCcHHHHHHHhhh------------cccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc---CCCcEEEC
Confidence 99999988754311 0123456778889999999999999999999999999999998 47889999
Q ss_pred ecCCCcccCCCCC---ccccccCCccccchhccc--------CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHH
Q 008127 260 DFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR--------KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 260 DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~--------~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i 327 (577)
|||++........ .....|++.|+|||++.+ .++.++|||||||++|+|++ |..||......+.....
T Consensus 143 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~ 222 (269)
T cd05087 143 DYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYT 222 (269)
T ss_pred CccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHH
Confidence 9999975432221 123467888999998753 24679999999999999996 99999776665554433
Q ss_pred HhC-CCCCCCCCC-CCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 328 LRN-KPDFRRKPW-PSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 328 ~~~-~~~~~~~~~-~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
... ...++.+.. ...++.+.+++..|+ .+|.+|||+.+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 223 VREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred hhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 322 222222211 246788999999999 58999999999874
No 355
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=4e-38 Score=312.91 Aligned_cols=259 Identities=21% Similarity=0.347 Sum_probs=207.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
++|++.+.||.|+||.||+|+.+. +.+.||+|.+..... ......+.+|+++++++ +||||+++++++.+.+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 81 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD--ENLQSEFRRELDMFRKL-SHKNVVRLLGLCREAE 81 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc--hHHHHHHHHHHHHHHhc-CCcceeeeEEEECCCC
Confidence 468999999999999999999654 346799998765432 22467789999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
..|+||||+++|+|.+++........ ......+++..+..++.||+.||.|||+.+|+||||||+||+++
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~--------~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~-- 151 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDE--------KLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVS-- 151 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccc--------cccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEe--
Confidence 99999999999999988754310000 00112689999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCC--CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
.++.++|+|||++....... ......++..|+|||.+.+ ..+.++|||||||++|+|++ |..||.+.........
T Consensus 152 -~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~ 230 (275)
T cd05046 152 -SQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNR 230 (275)
T ss_pred -CCCcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHH
Confidence 47789999999987543221 2234467788999998754 45888999999999999998 8899987777666666
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
+..+...+. ....++..+.+++.+||..+|.+|||+.+++..
T Consensus 231 ~~~~~~~~~--~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 231 LQAGKLELP--VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred HHcCCcCCC--CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 654443322 224578899999999999999999999999864
No 356
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=4.6e-38 Score=309.15 Aligned_cols=244 Identities=24% Similarity=0.360 Sum_probs=201.8
Q ss_pred eeecccCCeEEEEEEEcC-CCC--EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEec
Q 008127 102 KLLGHGQFGYTYVATDKA-NGD--RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~-~~~--~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~ 178 (577)
+.||.|+||.||+|.+.. .++ .||||.+...... ...+.+.+|+.+++++ +||||+++++++.. ..+++||||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~-~~~~~v~e~ 76 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSL-DHENLIRLYGVVLT-HPLMMVTEL 76 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhc-CCCCccceeEEEcC-CeEEEEEEe
Confidence 368999999999998865 333 6999998766532 4567899999999999 59999999999988 889999999
Q ss_pred cCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeE
Q 008127 179 CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 258 (577)
Q Consensus 179 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl 258 (577)
+++|+|.+.+... ....+++..++.++.|++.||.|||++|++||||||+||+++. ++.+||
T Consensus 77 ~~~~~L~~~l~~~---------------~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~---~~~~kl 138 (257)
T cd05040 77 APLGSLLDRLRKD---------------ALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLAS---DDKVKI 138 (257)
T ss_pred cCCCcHHHHHHhc---------------ccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEec---CCEEEe
Confidence 9999999877543 1146889999999999999999999999999999999999984 689999
Q ss_pred EecCCCcccCCCCC----ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCC
Q 008127 259 TDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 259 ~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+|||++........ .....++..|+|||.+.+ .++.++|||||||++|+|++ |..||...+..+....+.....
T Consensus 139 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~ 218 (257)
T cd05040 139 GDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGE 218 (257)
T ss_pred ccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC
Confidence 99999987643221 113457788999998865 56889999999999999998 9999988877777776665322
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
... ....++..+.+++.+||..+|++|||+.++++
T Consensus 219 ~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 219 RLE--RPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred cCC--CCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 222 12357889999999999999999999999875
No 357
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=5.5e-38 Score=308.42 Aligned_cols=246 Identities=22% Similarity=0.397 Sum_probs=203.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||+|.+. .+..+|+|.+..... ....+.+|+++++++ +||||+++++++......++||
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM----SEEDFIEEAQVMMKL-SHPKLVQLYGVCTERSPICLVF 78 (256)
T ss_pred HeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC----CHHHHHHHHHHHHhC-CCCCeeeEEEEEccCCceEEEE
Confidence 6899999999999999999875 467899998865432 345688999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+++... ...+++..++.++.|++.||.|||+.+++||||||+||+++ .++.+
T Consensus 79 e~~~~~~L~~~~~~~----------------~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~---~~~~~ 139 (256)
T cd05112 79 EFMEHGCLSDYLRAQ----------------RGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVG---ENQVV 139 (256)
T ss_pred EcCCCCcHHHHHHhC----------------ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEc---CCCeE
Confidence 999999998876432 24578999999999999999999999999999999999998 47789
Q ss_pred eEEecCCCcccCCCCC--ccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCC
Q 008127 257 KATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 257 kl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
||+|||++........ .....++..|+|||.+. +.++.++|||||||++|+|++ |..||......+....+..+..
T Consensus 140 ~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~ 219 (256)
T cd05112 140 KVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFR 219 (256)
T ss_pred EECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCC
Confidence 9999999876533211 12234567899999876 456889999999999999998 9999988777777766654422
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
.+. ....+..+.+|+.+||..+|++|||+.++++.
T Consensus 220 ~~~---~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 220 LYK---PRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred CCC---CCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 221 12367899999999999999999999999863
No 358
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=9.3e-39 Score=314.43 Aligned_cols=241 Identities=17% Similarity=0.252 Sum_probs=190.6
Q ss_pred eeecccCCeEEEEEEEcCCCC-------EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 102 KLLGHGQFGYTYVATDKANGD-------RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~-------~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
+.||.|+||.||+|.+..++. .||+|.+.... ....+.+..|+.+++.+ +||||+++++++..+...++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~l 76 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH---RNYSESFFEAASMMSQL-SHKHLVLNYGVCVCGDESIM 76 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh---HHHHHHHHHHHHHHHhC-CCCChhheeeEEEeCCCcEE
Confidence 369999999999998865544 48888875432 23456788899999998 59999999999999889999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC--
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE-- 252 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~-- 252 (577)
||||+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++..+.
T Consensus 77 v~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~ 140 (258)
T cd05078 77 VQEYVKFGSLDTYLKKN----------------KNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRK 140 (258)
T ss_pred EEecCCCCcHHHHHhcC----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccc
Confidence 99999999998876432 245788999999999999999999999999999999999985221
Q ss_pred ---CCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCC-CCCCCCChhHHHHH
Q 008127 253 ---DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGR-RPFWDKTEDGIFKE 326 (577)
Q Consensus 253 ---~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~-~Pf~~~~~~~~~~~ 326 (577)
.+.++++|||++...... ....+++.|+|||++.+ .++.++|||||||++|+|++|. .||....... ...
T Consensus 141 ~~~~~~~~l~d~g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~-~~~ 216 (258)
T cd05078 141 TGNPPFIKLSDPGISITVLPK---EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK-KLQ 216 (258)
T ss_pred cCCCceEEecccccccccCCc---hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH-HHH
Confidence 124799999998765432 23568899999998875 3588999999999999999985 5554444333 233
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
+......++ ...+.++.+||.+||+.||++|||+.++++.
T Consensus 217 ~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 217 FYEDRHQLP----APKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred HHHccccCC----CCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 333333322 2355789999999999999999999999863
No 359
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=3.1e-38 Score=315.35 Aligned_cols=250 Identities=26% Similarity=0.346 Sum_probs=197.4
Q ss_pred ceeeeeeecccCCeEEEEEEE----cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC--C
Q 008127 97 RYTIGKLLGHGQFGYTYVATD----KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--N 170 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~----~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~ 170 (577)
.|++++.||+|+||.||+|.. ..++..||+|.+.... .......+.+|+.+++.+ +||||+++++++... .
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhC-CCCCeeeeeeEEecCCCC
Confidence 478999999999999999974 4578899999986442 233456789999999999 599999999998875 5
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
..++||||++|++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~----------------~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~-- 143 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRN----------------KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE-- 143 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhc----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEc--
Confidence 789999999999998876432 23578999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCC----ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCCh-----
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE----- 320 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~----- 320 (577)
.++.+||+|||++........ .....|+..|+|||++.+ .++.++|||||||++|+|+++..|+.....
T Consensus 144 -~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~ 222 (284)
T cd05079 144 -SEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKM 222 (284)
T ss_pred -CCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhh
Confidence 478899999999987643322 123457778999998764 468899999999999999998776532110
Q ss_pred ---------hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 321 ---------DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 321 ---------~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
.......+.... ....+..++..+.+|+.+||+.+|.+|||+.++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 223 IGPTHGQMTVTRLVRVLEEGK--RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred cccccccccHHHHHHHHHcCc--cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 011111122111 112245688999999999999999999999999863
No 360
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=4.2e-38 Score=309.00 Aligned_cols=242 Identities=25% Similarity=0.399 Sum_probs=200.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||++. .+++.||+|.+.... ....+.+|+.+++.+ +||||+++++++..++ .++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~-~~~v 76 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV-----TAQAFLEETAVMTKL-HHKNLVRLLGVILHNG-LYIV 76 (254)
T ss_pred HHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc-----hHHHHHHHHHHHHhC-CCCCcCeEEEEEcCCC-cEEE
Confidence 369999999999999999995 578899999886432 346788999999999 5999999999987654 7999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++++|.+.+... ....+++..++.++.|++.||.|||+.|++||||||+||+++ .++.
T Consensus 77 ~e~~~~~~L~~~l~~~---------------~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~---~~~~ 138 (254)
T cd05083 77 MELMSKGNLVNFLRTR---------------GRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVS---EDGV 138 (254)
T ss_pred EECCCCCCHHHHHHhc---------------CcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---CCCc
Confidence 9999999999877432 234578999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+||+|||++...... ......+..|+|||.+.+ .++.++|||||||++|+|++ |+.||...+..+....+..+.
T Consensus 139 ~kl~Dfg~~~~~~~~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-- 214 (254)
T cd05083 139 AKVSDFGLARVGSMG--VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGY-- 214 (254)
T ss_pred EEECCCccceecccc--CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCC--
Confidence 999999998764322 223345678999998764 56889999999999999997 999998887777666655432
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.......++..+.+++.+||..+|.+||++.+++.
T Consensus 215 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 215 -RMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred -CCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 22223567899999999999999999999999875
No 361
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=7.9e-38 Score=306.17 Aligned_cols=242 Identities=24% Similarity=0.318 Sum_probs=198.1
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
++||+|+||.||+|.. .++..||+|.+.... .......+.+|+.+++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 76 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDL--PQELKIKFLSEARILKQY-DHPNIVKLIGVCTQRQPIYIVMELVPG 76 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhC-CCCCcCeEEEEEecCCccEEEEECCCC
Confidence 3699999999999985 468899999886542 233445788999999999 599999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
++|.+++... ...+++..+..++.|++.||.|||++|++||||||+||+++ .++.+||+||
T Consensus 77 ~~L~~~~~~~----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~---~~~~~~l~d~ 137 (250)
T cd05085 77 GDFLSFLRKK----------------KDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVG---ENNVLKISDF 137 (250)
T ss_pred CcHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEc---CCCeEEECCC
Confidence 9998876432 24578999999999999999999999999999999999998 4778999999
Q ss_pred CCCcccCCCCCc--cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008127 262 GLSDFIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRK 337 (577)
Q Consensus 262 Gla~~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~~~~~ 337 (577)
|++......... ....++..|+|||++.+ .++.++||||||+++|+|++ |..||.+.........+..... ..
T Consensus 138 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~---~~ 214 (250)
T cd05085 138 GMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYR---MS 214 (250)
T ss_pred ccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCC---CC
Confidence 998754332211 12234567999998764 46889999999999999998 9999988777666665544321 12
Q ss_pred CCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 338 PWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 338 ~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
....++..+.+++.+||..+|++||++.++++
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 215 CPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred CCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 23457899999999999999999999999875
No 362
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=8.5e-38 Score=307.93 Aligned_cols=247 Identities=23% Similarity=0.341 Sum_probs=202.3
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.++|++.+.||+|+||.||+|.+. .+..+|+|.+.... ...+.+.+|+.+++.+ +||||+++++.+.. ...++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~----~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~-~~~~~ 77 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS----MSVEAFLAEANVMKTL-QHDKLVKLHAVVTK-EPIYI 77 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh----hHHHHHHHHHHHHHhc-CCCCcceEEEEEcC-CCeEE
Confidence 457999999999999999999854 45679999876542 2456788999999999 59999999999887 77899
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++|+|.+++... ....++...+..++.||+.||.|||+.|++||||||+||+++ .++
T Consensus 78 v~e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~---~~~ 139 (260)
T cd05073 78 ITEFMAKGSLLDFLKSD---------------EGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS---ASL 139 (260)
T ss_pred EEEeCCCCcHHHHHHhC---------------CccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc---CCC
Confidence 99999999999877432 234578888999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCC--ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhC
Q 008127 255 SLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~ 330 (577)
.+||+|||++........ .....++..|+|||++... ++.++|+|||||++|+|++ |..||.+.+.......+...
T Consensus 140 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~ 219 (260)
T cd05073 140 VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG 219 (260)
T ss_pred cEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC
Confidence 999999999876543221 1223456779999988654 5789999999999999998 99999887776666655443
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.. .......+.++.+++.+||+.+|++||++.++++
T Consensus 220 ~~---~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 220 YR---MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred CC---CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 21 1223567889999999999999999999988764
No 363
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=7.2e-38 Score=310.01 Aligned_cols=256 Identities=28% Similarity=0.491 Sum_probs=208.9
Q ss_pred ceeeeeeecccCCeEEEEEEEcC-CCCEEEEEEeccccc-------CchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKA-NGDRVAVKKIEKNKM-------ILPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~-~~~~vaiK~i~~~~~-------~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 168 (577)
.|++.+.||+|+||.||+|.+.. +++.+|+|.+..... ........+.+|+.++.+..+||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 37888999999999999999887 678999998753221 1223456677899988764479999999999999
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEe
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLF 247 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl 247 (577)
++..++||||+++++|.+.+... ......+++..++.++.|++.||.|||+ .+++|+||+|+||++
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~-------------~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~ 147 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSL-------------KEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIML 147 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHH-------------HhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEE
Confidence 99999999999999998876431 1234568999999999999999999996 789999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
+ .++.+||+|||++.............|+..|+|||++.+. ++.++||||||+++|+|++|+.||...........
T Consensus 148 ~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~ 224 (269)
T cd08528 148 G---EDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATK 224 (269)
T ss_pred C---CCCcEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHH
Confidence 8 4788999999999876554444566799999999988654 58899999999999999999999987776666655
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
+...... ......+++.+.++|.+||..||.+||++.++..+
T Consensus 225 ~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 225 IVEAVYE--PLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred HhhccCC--cCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 5543322 11123578899999999999999999999998753
No 364
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=7.6e-38 Score=310.06 Aligned_cols=248 Identities=25% Similarity=0.357 Sum_probs=202.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCC---CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~---~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.+|.+.+.||.|+||.||+|.+... ...||||.+.... .....+.+.+|+.+++.+ +||||+++++++.+ +..
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~-~~~ 81 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQF-DHPHIVKLIGVITE-NPV 81 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhC-CCCchhceeEEEcC-CCc
Confidence 4689999999999999999987544 3468999876442 134566789999999999 59999999998875 457
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+||||+++|+|.+++... ...+++..+..++.|++.||.|||+.|++||||||+||+++.
T Consensus 82 ~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~--- 142 (270)
T cd05056 82 WIVMELAPLGELRSYLQVN----------------KYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSS--- 142 (270)
T ss_pred EEEEEcCCCCcHHHHHHhC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEec---
Confidence 8999999999999877432 245899999999999999999999999999999999999984
Q ss_pred CCCeeEEecCCCcccCCCCCcc--ccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQ--DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~--~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~ 328 (577)
++.+||+|||++.......... ...+++.|+|||.+.. .++.++|||||||++|+|++ |..||.+....+....+.
T Consensus 143 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~ 222 (270)
T cd05056 143 PDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIE 222 (270)
T ss_pred CCCeEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 6789999999997664332221 2234567999998764 45889999999999999986 999998887777666665
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+... ..++.++..+.++|.+||..+|.+|||+.+++.
T Consensus 223 ~~~~~---~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 223 NGERL---PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred cCCcC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 44321 223567899999999999999999999999876
No 365
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=9.2e-38 Score=305.86 Aligned_cols=242 Identities=25% Similarity=0.331 Sum_probs=198.7
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
++||.|+||.||+|.+.. ++.||+|.+..... ......+.+|+++++++ +||||+++++++......++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~ 76 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLP--PDLKRKFLQEAEILKQY-DHPNIVKLIGVCVQKQPIYIVMELVPG 76 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCC--HHHHHHHHHHHHHHHhC-CCCCeEEEEEEEecCCCeEEEEEcCCC
Confidence 369999999999999877 99999998866543 23556789999999999 599999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
++|.+++... ...++...+..++.+++.||.|||+++++||||||+|||++ .++.+||+||
T Consensus 77 ~~l~~~l~~~----------------~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~---~~~~~~l~d~ 137 (251)
T cd05041 77 GSLLTFLRKK----------------KNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVG---ENNVLKISDF 137 (251)
T ss_pred CcHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEc---CCCcEEEeec
Confidence 9998876432 24678899999999999999999999999999999999998 4778999999
Q ss_pred CCCcccCCCCCc---cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCC
Q 008127 262 GLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRR 336 (577)
Q Consensus 262 Gla~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~~~~ 336 (577)
|++......... ....++..|+|||.+.+ .++.++|||||||++|+|++ |..||...........+.... ..
T Consensus 138 g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~-~~-- 214 (251)
T cd05041 138 GMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY-RM-- 214 (251)
T ss_pred cccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCC-CC--
Confidence 999765422111 11234567999998764 46889999999999999999 899997777665555554322 11
Q ss_pred CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 337 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 337 ~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.....++.++.+++.+||..+|.+|||+.++++
T Consensus 215 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 215 PAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred CCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 122457889999999999999999999999986
No 366
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=8.7e-38 Score=312.03 Aligned_cols=249 Identities=25% Similarity=0.395 Sum_probs=195.7
Q ss_pred cceeeeeeecccCCeEEEEEE----EcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--C
Q 008127 96 RRYTIGKLLGHGQFGYTYVAT----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--D 169 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~----~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~ 169 (577)
.+|++.+.||+|+||.||+|. +..++..||+|.+.... ......+.+|+++++.+ +||||+++++++.. .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST---AEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGR 79 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC---HHHHHHHHHHHHHHHhC-CCCCeeEEEEEEccCCC
Confidence 478999999999999999997 34678899999986543 34456789999999999 59999999998753 4
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
..+++||||+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~----------------~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~- 142 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKH----------------RERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVE- 142 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhc----------------CcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEEC-
Confidence 5789999999999999877432 24588999999999999999999999999999999999998
Q ss_pred CCCCCCeeEEecCCCcccCCCCCc----cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChh---
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED--- 321 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~--- 321 (577)
.++.+||+|||++......... ....++..|+|||++.+ .++.++|||||||++|||++|..|+......
T Consensus 143 --~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~ 220 (284)
T cd05081 143 --SENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMR 220 (284)
T ss_pred --CCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhh
Confidence 4788999999999876433221 11234456999998765 4688999999999999999988776432211
Q ss_pred ------------HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 322 ------------GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 322 ------------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
..+..++.....+ .....++..+.+|+.+||..+|++|||+.++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 221 MMGNDKQGQMIVYHLIELLKNNGRL--PAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred hcccccccccchHHHHHHHhcCCcC--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 0011222222211 223467889999999999999999999999976
No 367
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-39 Score=334.34 Aligned_cols=249 Identities=28% Similarity=0.451 Sum_probs=198.3
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC------
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN------ 170 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~------ 170 (577)
.+...+.||+|+||.||+++++.+|+.||||.+..... ....+.+.+|+++|++|. |||||+++++-++..
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~--~r~~e~~~~EieilkKLn-h~NIVk~f~iee~~~~~~~~~ 90 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESS--LRPRERWCREIEILKKLN-HPNIVKLFDIEETKFLGLVTR 90 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcc--cchHHHHHHHHHHHHHcC-chhhhhhcccCCccccCcccc
Confidence 35667789999999999999999999999999876442 335678899999999995 999999998765433
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
...+|||||.||+|...+.+- .+...|++.+++.++..+..||.|||++|||||||||.||++-..
T Consensus 91 ~~vlvmEyC~gGsL~~~L~~P--------------EN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~G 156 (732)
T KOG4250|consen 91 LPVLVMEYCSGGSLRKVLNSP--------------ENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIG 156 (732)
T ss_pred cceEEEeecCCCcHHHHhcCc--------------ccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeec
Confidence 467999999999999877432 234679999999999999999999999999999999999998743
Q ss_pred C-CCCCeeEEecCCCcccCCCCCccccccCCccccchhcc--cCCCCCCchhhHHHHHHHHHhCCCCCCCCC----hhHH
Q 008127 251 K-EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKT----EDGI 323 (577)
Q Consensus 251 ~-~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwSlG~il~el~tg~~Pf~~~~----~~~~ 323 (577)
. ....-||+|||.|+.+.++..+...+||+.|.+||++. +.|+..+|.|||||++|+++||..||.... ..++
T Consensus 157 edgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~ 236 (732)
T KOG4250|consen 157 EDGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEI 236 (732)
T ss_pred CCCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchh
Confidence 2 34568999999999999999999999999999999987 456888999999999999999999995432 2234
Q ss_pred HHHHHhCCCCCC-----------------CCCCCCCCH----HHHHHHHHccccCcCCCC
Q 008127 324 FKEVLRNKPDFR-----------------RKPWPSISN----SAKDFVKKLLVKDPRARL 362 (577)
Q Consensus 324 ~~~i~~~~~~~~-----------------~~~~~~~s~----~~~~li~~~l~~dP~~Rp 362 (577)
...++..++.-. .+....+++ .+..++..+|..+|++|-
T Consensus 237 ~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 237 MWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred hhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 444433222110 000112333 245677888999999998
No 368
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.1e-37 Score=310.72 Aligned_cols=256 Identities=20% Similarity=0.253 Sum_probs=205.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcC----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-CC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKA----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-DN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~----~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~~ 170 (577)
++|++.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.+ +||||+++++++.. +.
T Consensus 6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA--SEIQVTLLLQESCLLYGL-SHQNILPILHVCIEDGE 82 (280)
T ss_pred hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCC
Confidence 579999999999999999999876 35789999876432 334567789999999999 59999999998765 56
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
..++++||+++|+|.+++....... ......+++..++.++.||+.||.|||+++++||||||+||+++
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~---------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~-- 151 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGE---------ANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVID-- 151 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccc---------cccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEc--
Confidence 7899999999999988775431000 00125689999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCCc---cccccCCccccchhcccC-CCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
.++.+||+|||+++.+...... ....++..|+|||++.+. ++.++|||||||++|++++ |+.||...+..++..
T Consensus 152 -~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~ 230 (280)
T cd05043 152 -EELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAA 230 (280)
T ss_pred -CCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHH
Confidence 4689999999999865433211 223466789999987654 5889999999999999999 999998877666555
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+..+ .... ....+++++.+++.+||..||++|||+.++++
T Consensus 231 ~~~~~-~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 231 YLKDG-YRLA--QPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred HHHcC-CCCC--CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 44443 2222 23457889999999999999999999999875
No 369
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=7.2e-38 Score=308.84 Aligned_cols=241 Identities=18% Similarity=0.202 Sum_probs=188.2
Q ss_pred eeecccCCeEEEEEEEcC------------CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 102 KLLGHGQFGYTYVATDKA------------NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~------------~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
+.||+|+||.||+|.... ....||+|.+.... ......+..|+.++..+ +||||+++++++..+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~l~~l-~hp~iv~~~~~~~~~ 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH---RDISLAFFETASMMRQV-SHKHIVLLYGVCVRD 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh---hhHHHHHHHHHHHHHhC-CCCCEeeEEEEEecC
Confidence 358999999999997432 23368899876542 23445678899999999 599999999999998
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
...++||||+++|+|..++.. ....+++..++.++.||+.||.|||+++|+||||||+|||++.
T Consensus 77 ~~~~lv~e~~~~~~l~~~~~~----------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~ 140 (262)
T cd05077 77 VENIMVEEFVEFGPLDLFMHR----------------KSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAR 140 (262)
T ss_pred CCCEEEEecccCCCHHHHHHh----------------cCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEec
Confidence 899999999999998765532 2356899999999999999999999999999999999999974
Q ss_pred CC----CCCCeeEEecCCCcccCCCCCccccccCCccccchhcc--cCCCCCCchhhHHHHHHHHH-hCCCCCCCCChhH
Q 008127 250 AK----EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILL-CGRRPFWDKTEDG 322 (577)
Q Consensus 250 ~~----~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwSlG~il~el~-tg~~Pf~~~~~~~ 322 (577)
.+ ....+|++|||++...... ....++..|+|||++. ..++.++|||||||++|+|+ +|..||......+
T Consensus 141 ~~~~~~~~~~~~l~d~g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~ 217 (262)
T cd05077 141 EGIDGECGPFIKLSDPGIPITVLSR---QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE 217 (262)
T ss_pred CCccCCCCceeEeCCCCCCccccCc---ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH
Confidence 21 1124899999998765322 3346888999999875 34688999999999999998 5888887655443
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 323 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 323 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
.. ......... ....+.++.+||.+||+.||.+||++.+|+++
T Consensus 218 ~~-~~~~~~~~~----~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 218 KE-RFYEGQCML----VTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred HH-HHHhcCccC----CCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 32 222222111 12345789999999999999999999999874
No 370
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=3e-38 Score=306.75 Aligned_cols=228 Identities=22% Similarity=0.327 Sum_probs=185.9
Q ss_pred cCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCCCchhH
Q 008127 107 GQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD 186 (577)
Q Consensus 107 G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~ 186 (577)
|.||.||+|+++.+|+.||+|.+.... ...+|...+... .||||+++++++.....+|+||||++||+|.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPH-CVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWS 74 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhc-CCCceeehhhheecCCeEEEEEecCCCCCHHH
Confidence 899999999999999999999987643 123344444455 49999999999999999999999999999988
Q ss_pred HHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcc
Q 008127 187 RILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266 (577)
Q Consensus 187 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~ 266 (577)
.+... ..+++..+..++.|++.||.|||+.||+||||||+||+++ .++.++|+|||++..
T Consensus 75 ~l~~~-----------------~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~df~~~~~ 134 (237)
T cd05576 75 HISKF-----------------LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLD---DRGHIQLTYFSRWSE 134 (237)
T ss_pred HHHHh-----------------cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc---CCCCEEEecccchhc
Confidence 77433 4589999999999999999999999999999999999998 477899999998866
Q ss_pred cCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHH
Q 008127 267 IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 345 (577)
Q Consensus 267 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 345 (577)
.... .....++..|+|||.+.+ .++.++||||+||++|+|++|..||...... + ...... ...+.+++.
T Consensus 135 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~-~~~~~~--~~~~~~~~~ 204 (237)
T cd05576 135 VEDS--CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-----I-NTHTTL--NIPEWVSEE 204 (237)
T ss_pred cccc--cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----c-cccccc--CCcccCCHH
Confidence 5432 234466788999998864 4688999999999999999999987543221 0 001111 112347889
Q ss_pred HHHHHHHccccCcCCCCCH-----HHHhcCccc
Q 008127 346 AKDFVKKLLVKDPRARLTA-----AQALSHPWV 373 (577)
Q Consensus 346 ~~~li~~~l~~dP~~Rpt~-----~~il~hp~f 373 (577)
+.++|.+||+.||.+|||+ .++++||||
T Consensus 205 ~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 205 ARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred HHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 9999999999999999986 999999998
No 371
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.1e-37 Score=314.19 Aligned_cols=249 Identities=23% Similarity=0.295 Sum_probs=199.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCC----EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGD----RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~----~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
.+|++.+.||+|+||.||+|.+..+|. .||+|.+..... +.....+.+|+.+++.+ +||||+++++++... .
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~-~ 82 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG--PKANVEFMDEALIMASM-DHPHLVRLLGVCLSP-T 82 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC--HHHHHHHHHHHHHHHhC-CCCCcccEEEEEcCC-C
Confidence 468899999999999999999887776 478888764432 33445688999999999 599999999988754 4
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.++++||+++|+|.+++... ...+++..+..++.||+.||.|||+++|+||||||+|||++
T Consensus 83 ~~~v~e~~~~g~l~~~~~~~----------------~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~--- 143 (303)
T cd05110 83 IQLVTQLMPHGCLLDYVHEH----------------KDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVK--- 143 (303)
T ss_pred ceeeehhcCCCCHHHHHHhc----------------ccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeec---
Confidence 67999999999998876432 24678899999999999999999999999999999999997
Q ss_pred CCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
.++.+||+|||+++....... .....++..|+|||++.+ .++.++|||||||++|+|++ |..||.+........
T Consensus 144 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~- 222 (303)
T cd05110 144 SPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPD- 222 (303)
T ss_pred CCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-
Confidence 467899999999986543222 223346778999998765 45889999999999999997 999997766554443
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
++.....++ ..+..+..+.+++.+||..+|++||++.++++.
T Consensus 223 ~~~~~~~~~--~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 223 LLEKGERLP--QPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred HHHCCCCCC--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 333332222 224567899999999999999999999998773
No 372
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=8.4e-38 Score=310.42 Aligned_cols=240 Identities=17% Similarity=0.191 Sum_probs=189.2
Q ss_pred eecccCCeEEEEEEEcCC------------------------CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCC
Q 008127 103 LLGHGQFGYTYVATDKAN------------------------GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158 (577)
Q Consensus 103 ~lG~G~fg~V~~~~~~~~------------------------~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpn 158 (577)
.||+|+||.||+|....+ ...||+|.+.... ......+.+|+.+++.+ +|||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~l-~h~n 77 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH---RDIALAFFETASLMSQV-SHIH 77 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH---HHHHHHHHHHHHHHhcC-CCCC
Confidence 599999999999975322 2458899886442 22345678899999998 5999
Q ss_pred eeEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceec
Q 008127 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 238 (577)
Q Consensus 159 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHr 238 (577)
|+++++++......++||||+++|+|...+.. ....+++..+..++.||+.||.|||+++|+||
T Consensus 78 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~----------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~ 141 (274)
T cd05076 78 LAFVHGVCVRGSENIMVEEFVEHGPLDVCLRK----------------EKGRVPVAWKITVAQQLASALSYLEDKNLVHG 141 (274)
T ss_pred eeeEEEEEEeCCceEEEEecCCCCcHHHHHHh----------------cCCCCCHHHHHHHHHHHHHHHHHHHcCCccCC
Confidence 99999999999999999999999998776532 23568899999999999999999999999999
Q ss_pred cCCCCcEEeecCC----CCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHH-hC
Q 008127 239 DMKPENFLFKSAK----EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILL-CG 311 (577)
Q Consensus 239 DlKp~NILl~~~~----~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~-tg 311 (577)
||||+|||++..+ ....+||+|||++...... ....++..|+|||.+.+ .++.++|||||||++|+|+ +|
T Consensus 142 dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g 218 (274)
T cd05076 142 NVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR---EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDG 218 (274)
T ss_pred CCCcccEEEeccCcccCccceeeecCCccccccccc---cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9999999997421 2335899999988654321 23467889999998864 3588999999999999985 69
Q ss_pred CCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 312 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 312 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
..||......+... +.......+ ...++.+.++|.+||..+|.+|||+.++|++
T Consensus 219 ~~p~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 219 EVPLKERTPSEKER-FYEKKHRLP----EPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred CCCccccChHHHHH-HHHhccCCC----CCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 99998766554433 323222222 2245789999999999999999999999874
No 373
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=9e-38 Score=309.24 Aligned_cols=251 Identities=25% Similarity=0.344 Sum_probs=199.4
Q ss_pred eecccCCeEEEEEEEcCCC------CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 103 LLGHGQFGYTYVATDKANG------DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 103 ~lG~G~fg~V~~~~~~~~~------~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
.||.|+||.||+|.+.... +.+|||.+.+... ......+.+|+.+++.+ +||||+++++++...+..++||
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT--DQEKKEFLKEAHLMSNF-NHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccc--hhhHHHHHHHHHHHHhc-CCCCeeeEeeeecCCCCeEEEE
Confidence 5999999999999876433 6899998765421 23456788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC--CCC
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--EDS 254 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~--~~~ 254 (577)
||+++++|.+++...... ......+++..+..++.||+.||.|||+.+++|+||||+||+++..+ ...
T Consensus 79 e~~~~~~L~~~l~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~ 148 (269)
T cd05044 79 ELMEGGDLLSYLRDARVE----------RFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADR 148 (269)
T ss_pred eccCCCcHHHHHHHhhhc----------ccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCc
Confidence 999999999988654110 00234578899999999999999999999999999999999998522 123
Q ss_pred CeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008127 255 SLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~ 329 (577)
.+||+|||++........ .....++..|+|||++.+ ..+.++|||||||++|+|++ |..||...+..+....+..
T Consensus 149 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~ 228 (269)
T cd05044 149 VVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTA 228 (269)
T ss_pred ceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhc
Confidence 799999999976543221 123356788999998764 46889999999999999998 9999987776666555543
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+. . ......+|..+.+||.+||..+|.+||++.++++
T Consensus 229 ~~-~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 229 GG-R--LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred CC-c--cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 22 1 1223457889999999999999999999999875
No 374
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=1.5e-39 Score=321.19 Aligned_cols=263 Identities=26% Similarity=0.442 Sum_probs=219.5
Q ss_pred ccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc-----CCCCeeEEEEE
Q 008127 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA-----GHENVVKFYNA 165 (577)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~-----~hpniv~~~~~ 165 (577)
.+.+..+|.|....|+|-|+.|..|.+...|..||||+|..+.. ....=+.|++||++|. +--|++.|+..
T Consensus 427 gE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~----M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~ 502 (752)
T KOG0670|consen 427 GELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV----MHKTGLKELEILKKLNDADPEDKFHCLRLFRH 502 (752)
T ss_pred hhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH----HhhhhhHHHHHHHHhhccCchhhhHHHHHHHH
Confidence 34567899999999999999999999999999999999987643 4455578999999996 34589999999
Q ss_pred EEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcE
Q 008127 166 FEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 245 (577)
Q Consensus 166 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NI 245 (577)
|...+++|||+|.+ ..+|.+.|..- -.+-.|....++.|+.|++.||..|-..||+|.||||+||
T Consensus 503 F~hknHLClVFE~L-slNLRevLKKy--------------G~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNi 567 (752)
T KOG0670|consen 503 FKHKNHLCLVFEPL-SLNLREVLKKY--------------GRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNI 567 (752)
T ss_pred hhhcceeEEEehhh-hchHHHHHHHh--------------CcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccce
Confidence 99999999999998 45888877543 2446688889999999999999999999999999999999
Q ss_pred EeecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHH
Q 008127 246 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324 (577)
Q Consensus 246 Ll~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~ 324 (577)
|++. ....+||||||.|.....+. .+.+.-+..|+|||++.| .|....|+||.||+||||+||+..|.+.+...++
T Consensus 568 LVNE--~k~iLKLCDfGSA~~~~ene-itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~ML 644 (752)
T KOG0670|consen 568 LVNE--SKNILKLCDFGSASFASENE-ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQML 644 (752)
T ss_pred Eecc--CcceeeeccCcccccccccc-ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHH
Confidence 9984 56789999999998876544 456677889999998876 4689999999999999999999999999988888
Q ss_pred HHHHhCCCCCCCCCC-------------------------------------------------CCCC-------HHHHH
Q 008127 325 KEVLRNKPDFRRKPW-------------------------------------------------PSIS-------NSAKD 348 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~-------------------------------------------------~~~s-------~~~~~ 348 (577)
...+.-...|+...+ +.++ ..+.+
T Consensus 645 rl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rd 724 (752)
T KOG0670|consen 645 RLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRD 724 (752)
T ss_pred HHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHH
Confidence 766554333332110 0011 25789
Q ss_pred HHHHccccCcCCCCCHHHHhcCccccc
Q 008127 349 FVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 349 li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
||.+||..||++|+|..++|.||||+.
T Consensus 725 LLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 725 LLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred HHHHHhccChhhcCCHHHHhcCCcccC
Confidence 999999999999999999999999974
No 375
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.8e-37 Score=305.83 Aligned_cols=243 Identities=23% Similarity=0.287 Sum_probs=191.8
Q ss_pred eeecccCCeEEEEEEEcC---CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE-cCCeEEEEEe
Q 008127 102 KLLGHGQFGYTYVATDKA---NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE-DDNYVYIAME 177 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~---~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~-~~~~~~lv~e 177 (577)
+.||+|+||.||+|.+.. .+..||||.+.... .....+.+.+|+.+++.+ +||||+++++++. .++..++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~lv~e 77 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT--DLEEVEQFLKEGIIMKDF-SHPNVLSLLGICLPSEGSPLVVLP 77 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC--CHHHHHHHHHHHHHHccC-CCCCcceEEEEeecCCCCcEEEEe
Confidence 368999999999998653 34579999875432 233467788999999999 5999999999765 4667899999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
|+++|+|.+++... ...++...+..++.||+.||.|||+.+|+||||||+|||++ .++.+|
T Consensus 78 ~~~~~~L~~~~~~~----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~---~~~~~k 138 (262)
T cd05058 78 YMKHGDLRNFIRSE----------------THNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLD---ESFTVK 138 (262)
T ss_pred cCCCCCHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc---CCCcEE
Confidence 99999998877432 23457777889999999999999999999999999999998 477899
Q ss_pred EEecCCCcccCCCC-----CccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhC
Q 008127 258 ATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 258 l~DFGla~~~~~~~-----~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~ 330 (577)
|+|||++....... ......+++.|+|||.+. ..++.++|||||||++|+|++ |.+||......+....+..+
T Consensus 139 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~ 218 (262)
T cd05058 139 VADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQG 218 (262)
T ss_pred ECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC
Confidence 99999997653221 112335677899999875 456889999999999999999 56677766666666555543
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
... . ....+++.+.+++.+||..+|++||++.+++.
T Consensus 219 ~~~-~--~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 219 RRL-L--QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred CCC-C--CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 221 1 11346789999999999999999999999976
No 376
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=4.3e-37 Score=304.35 Aligned_cols=247 Identities=17% Similarity=0.276 Sum_probs=192.2
Q ss_pred eecccCCeEEEEEEEcCC--CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 103 LLGHGQFGYTYVATDKAN--GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 103 ~lG~G~fg~V~~~~~~~~--~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
.||+|+||.||+|..... ...+++|.+..... ......+.+|+.+++.+ +||||+++++.+.....+|+||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS--SKEQNEFLQQGDPYRIL-QHPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC--hHHHHHHHHHHHHHhcc-CCcchhheEEEecCCCccEEEEecCC
Confidence 599999999999975433 23566776654321 23457789999999999 59999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
+|+|.+++.... .....+++..+..++.||+.||.|||+.+|+||||||+|||++ .++.+||+|
T Consensus 79 ~~~L~~~l~~~~-------------~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~---~~~~~~l~D 142 (268)
T cd05086 79 LGDLKSYLSQEQ-------------WHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLT---SDLTVKVGD 142 (268)
T ss_pred CCcHHHHHHhhh-------------cccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEc---CCccEEecc
Confidence 999998875431 0123466777889999999999999999999999999999998 478899999
Q ss_pred cCCCcccCCCC---CccccccCCccccchhccc--------CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHH
Q 008127 261 FGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR--------KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 261 FGla~~~~~~~---~~~~~~gt~~y~aPE~~~~--------~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~ 328 (577)
||++....... .....+|+..|+|||++.. .++.++|||||||++|+|++ |..||......+.+..++
T Consensus 143 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~ 222 (268)
T cd05086 143 YGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVI 222 (268)
T ss_pred cccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 99986432211 1234578899999998742 23678999999999999997 577887777777777765
Q ss_pred hCCC-CCCCCC-CCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 329 RNKP-DFRRKP-WPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 329 ~~~~-~~~~~~-~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.... ....+. ...+++.+.+++..|| .+|.+||++.++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 223 KDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred hhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 5432 222221 2346788999999999 67999999999865
No 377
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-39 Score=330.51 Aligned_cols=248 Identities=26% Similarity=0.418 Sum_probs=216.3
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCC---EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~---~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
...|.++||.|.||+|++|+.+..|+ .||||.++..- .+.....|+.|..||.++ +||||++|.++......+.
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--tekqrrdFL~EAsIMGQF-dHPNIIrLEGVVTks~PvM 706 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--TEKQRRDFLSEASIMGQF-DHPNIIRLEGVVTKSKPVM 706 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--cHHHHhhhhhhhhhcccC-CCCcEEEEEEEEecCceeE
Confidence 35778899999999999999887774 69999997543 356778899999999999 5999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
||+|||++|+|..+|..+ .+.|+.-++..+++.|+.|+.||-+.++|||||-..|||+++ +
T Consensus 707 IiTEyMENGsLDsFLR~~----------------DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNs---n 767 (996)
T KOG0196|consen 707 IITEYMENGSLDSFLRQN----------------DGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNS---N 767 (996)
T ss_pred EEhhhhhCCcHHHHHhhc----------------CCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeecc---c
Confidence 999999999999887644 577999999999999999999999999999999999999984 8
Q ss_pred CCeeEEecCCCcccCCCCC--cccccc--CCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHH
Q 008127 254 SSLKATDFGLSDFIKPGKK--FQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~--~~~~~g--t~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i 327 (577)
..+|++|||+++.+.+... +.+.-| ..+|.|||.+. .+++.++||||+||++||.++ |..|||+++.+++++.|
T Consensus 768 LvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaI 847 (996)
T KOG0196|consen 768 LVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 847 (996)
T ss_pred eEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHH
Confidence 9999999999998865442 222223 35799999875 678999999999999999766 99999999999999999
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
..+ ++.++..++|..+..|+..||++|-..||...+|+.
T Consensus 848 e~g---yRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 848 EQG---YRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred Hhc---cCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 775 344455789999999999999999999999999876
No 378
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.1e-37 Score=304.72 Aligned_cols=238 Identities=16% Similarity=0.188 Sum_probs=189.0
Q ss_pred eeecccCCeEEEEEEEcCCC----------CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 102 KLLGHGQFGYTYVATDKANG----------DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~----------~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
+.||+|+||.||+|.+..++ ..+++|.+..... ....+.+|+.+++.+ +||||+++++++.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR----DSLAFFETASLMSQL-SHKHLVKLYGVCVR-DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh----hHHHHHHHHHHHHcC-CCcchhheeeEEec-CC
Confidence 36999999999999988776 3578887654421 257788999999999 59999999999887 77
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.++||||+++|+|.+++... ...++...+..++.||+.||.|||++||+||||||+|||++..+
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~ 138 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHRE----------------KNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYG 138 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhh----------------ccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCc
Confidence 89999999999998877543 12688999999999999999999999999999999999998422
Q ss_pred ----CCCCeeEEecCCCcccCCCCCccccccCCccccchhcccC---CCCCCchhhHHHHHHHHHh-CCCCCCCCChhHH
Q 008127 252 ----EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 323 (577)
Q Consensus 252 ----~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~ 323 (577)
....+||+|||++..... .....++..|+|||++.+. ++.++|||||||++|+|++ |..||...+..+.
T Consensus 139 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~ 215 (259)
T cd05037 139 LNEGYVPFIKLSDPGIPITVLS---REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK 215 (259)
T ss_pred cccCCceeEEeCCCCccccccc---ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH
Confidence 112799999999986543 2234677889999998754 5889999999999999999 6888866654443
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
...... ....+. ..+..+.++|.+||..+|.+|||+.++++
T Consensus 216 ~~~~~~-~~~~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 216 ERFYQD-QHRLPM----PDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred HHHHhc-CCCCCC----CCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 333321 111111 12378999999999999999999999986
No 379
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=306.35 Aligned_cols=272 Identities=30% Similarity=0.479 Sum_probs=209.7
Q ss_pred CCCccccccc-cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCC-------C
Q 008127 86 TDFGYDKDFD-RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH-------E 157 (577)
Q Consensus 86 ~~~~~~~~~~-~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~h-------p 157 (577)
......+.|. .+|.+.++||-|.|++||+|.|..+.+.||+|+.+... ...+....||.+|++++.+ .
T Consensus 67 HpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq----hYtEaAlDEIklL~~v~~~Dp~~~~~~ 142 (590)
T KOG1290|consen 67 HPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ----HYTEAALDEIKLLQQVREGDPNDPGKK 142 (590)
T ss_pred ceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh----HHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 3344556677 89999999999999999999999999999999987653 3566778999999998733 3
Q ss_pred CeeEEEEEEEc----CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-
Q 008127 158 NVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL- 232 (577)
Q Consensus 158 niv~~~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~- 232 (577)
+||+|++.|.. +.++|+|+|++ |.+|+..|... ..+.++...++.|++|||.||.|||.
T Consensus 143 ~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s---------------~YrGlpl~~VK~I~~qvL~GLdYLH~e 206 (590)
T KOG1290|consen 143 CVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYS---------------NYRGLPLSCVKEICRQVLTGLDYLHRE 206 (590)
T ss_pred eeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHh---------------CCCCCcHHHHHHHHHHHHHHHHHHHHh
Confidence 79999999974 45899999999 88898877654 45779999999999999999999997
Q ss_pred cCceeccCCCCcEEeecCC-------------------------------------------------------------
Q 008127 233 HGLVHRDMKPENFLFKSAK------------------------------------------------------------- 251 (577)
Q Consensus 233 ~~iiHrDlKp~NILl~~~~------------------------------------------------------------- 251 (577)
.||||.||||+|||+...+
T Consensus 207 cgIIHTDlKPENvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~ 286 (590)
T KOG1290|consen 207 CGIIHTDLKPENVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEA 286 (590)
T ss_pred cCccccCCCcceeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhh
Confidence 6999999999999992210
Q ss_pred --------------------------------------------------C-----------------------------
Q 008127 252 --------------------------------------------------E----------------------------- 252 (577)
Q Consensus 252 --------------------------------------------------~----------------------------- 252 (577)
.
T Consensus 287 ~l~~~~~~~~~~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~ 366 (590)
T KOG1290|consen 287 SLAGLEGIEEEPNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLS 366 (590)
T ss_pred hhcccccccccccccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhccccccccccccc
Confidence 0
Q ss_pred -----------------------CCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHH
Q 008127 253 -----------------------DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYIL 308 (577)
Q Consensus 253 -----------------------~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el 308 (577)
+..|||+|||-|++.. ..++.-+.|..|+|||++.+ .|++.+||||++|++|||
T Consensus 367 s~~s~~~~~~n~~v~p~~~~~~~di~vKIaDlGNACW~~--khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FEL 444 (590)
T KOG1290|consen 367 SPSSPGTIASNPLVNPDIPLPECDIRVKIADLGNACWVH--KHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFEL 444 (590)
T ss_pred CcCCccccccccccCCCCCCCccceeEEEeeccchhhhh--hhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHh
Confidence 0136777777777653 44555678999999998765 689999999999999999
Q ss_pred HhCCCCCCCCC------hhHHHHHHH------------hCCC--CC-----------CCCCCCC---------CC----H
Q 008127 309 LCGRRPFWDKT------EDGIFKEVL------------RNKP--DF-----------RRKPWPS---------IS----N 344 (577)
Q Consensus 309 ~tg~~Pf~~~~------~~~~~~~i~------------~~~~--~~-----------~~~~~~~---------~s----~ 344 (577)
+||...|...+ .++-+..|+ .+.. .| ...+|+- +| .
T Consensus 445 aTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~ 524 (590)
T KOG1290|consen 445 ATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQ 524 (590)
T ss_pred hcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHH
Confidence 99999994321 111122211 1110 00 0112321 22 3
Q ss_pred HHHHHHHHccccCcCCCCCHHHHhcCccccccCCC
Q 008127 345 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379 (577)
Q Consensus 345 ~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~ 379 (577)
++.+||.-||+.+|++||||.++|+|||+......
T Consensus 525 ~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~~~~ 559 (590)
T KOG1290|consen 525 QFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPVAGP 559 (590)
T ss_pred HHHHHHHHHHhcCccccccHHHHhcCccccCCCCC
Confidence 67899999999999999999999999999976654
No 380
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=3.7e-37 Score=309.00 Aligned_cols=250 Identities=17% Similarity=0.213 Sum_probs=182.5
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCC---CCEEEEEEecccccCchhhH--------HHHHHHHHHHHHhcCCCCeeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKMILPIAV--------EDVKREVKILQALAGHENVVK 161 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~---~~~vaiK~i~~~~~~~~~~~--------~~~~~E~~~l~~l~~hpniv~ 161 (577)
...++|++.+.||+|+||.||+|.+..+ +..+|+|+............ .....+...+..+ +|++|+.
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~-~h~~i~~ 87 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNI-DHLGIPK 87 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccC-CCCCCCc
Confidence 3456899999999999999999998877 66778886433221100000 0112223334445 5999999
Q ss_pred EEEEEEcCC----eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCcee
Q 008127 162 FYNAFEDDN----YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 237 (577)
Q Consensus 162 ~~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiH 237 (577)
+++++.... ..++++|++. .++.+.+.. ....++..++.++.|++.||.|||+.+|+|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----------------~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH 149 (294)
T PHA02882 88 YYGCGSFKRCRMYYRFILLEKLV-ENTKEIFKR-----------------IKCKNKKLIKNIMKDMLTTLEYIHEHGISH 149 (294)
T ss_pred EEEeeeEecCCceEEEEEEehhc-cCHHHHHHh-----------------hccCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 998765432 4578888874 345443321 134578889999999999999999999999
Q ss_pred ccCCCCcEEeecCCCCCCeeEEecCCCcccCCCC--------CccccccCCccccchhcccC-CCCCCchhhHHHHHHHH
Q 008127 238 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK--------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYIL 308 (577)
Q Consensus 238 rDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~--------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el 308 (577)
|||||+|||++ .++.++|+|||+|+...... ......||+.|+|||++.+. ++.++|||||||++|+|
T Consensus 150 rDiKp~Nill~---~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el 226 (294)
T PHA02882 150 GDIKPENIMVD---GNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKW 226 (294)
T ss_pred CCCCHHHEEEc---CCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 99999999998 46789999999997653221 11234799999999988754 58899999999999999
Q ss_pred HhCCCCCCCCCh-hHHH--------HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 309 LCGRRPFWDKTE-DGIF--------KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 309 ~tg~~Pf~~~~~-~~~~--------~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
++|..||.+... .... ..+..+. ...+..++.+.+++..||..+|++||++.++++
T Consensus 227 ~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 227 AGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGK-----IKIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HhCCCCCCccccchHHHHHhHHHHHHHhhhhh-----hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 999999977632 2211 2222221 123456789999999999999999999999875
No 381
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=4.5e-37 Score=304.94 Aligned_cols=253 Identities=20% Similarity=0.331 Sum_probs=201.0
Q ss_pred eeeeeeecccCCeEEEEEEEc---CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC----
Q 008127 98 YTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN---- 170 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~---- 170 (577)
|.+.+.||+|+||.||+|.+. .+++.||||++..... .....+.+.+|+.+++.+ +||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 78 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIF-SSSDIEEFLREAACMKEF-DHPNVIKLIGVSLRSRAKGR 78 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccC-ChHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCCCCCc
Confidence 567889999999999999864 3578999999865432 334567789999999999 5999999999886432
Q ss_pred --eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 171 --YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 171 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
..+++++|+++|+|.+++...... .....++...++.++.||+.||.|||+.||+||||||+||+++
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~-----------~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~ 147 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIG-----------EEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLN 147 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhccc-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEc
Confidence 347899999999998876432110 1123578899999999999999999999999999999999997
Q ss_pred cCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHh-CCCCCCCCChhHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 323 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~ 323 (577)
.++.+||+|||+++....... .....+++.|++||.+... ++.++|||||||++|+|++ |.+||.+....+.
T Consensus 148 ---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~ 224 (273)
T cd05074 148 ---ENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEI 224 (273)
T ss_pred ---CCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHH
Confidence 478899999999986543221 1233456789999987654 4788999999999999999 8999987777766
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+..+...... . ..+..+..+.+++.+||..+|.+|||+.+++.
T Consensus 225 ~~~~~~~~~~-~--~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 225 YNYLIKGNRL-K--QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred HHHHHcCCcC-C--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 6666554321 1 12457789999999999999999999999876
No 382
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-38 Score=316.77 Aligned_cols=244 Identities=25% Similarity=0.405 Sum_probs=205.2
Q ss_pred eeeeeecccCCeEEEEEEEcC--CC--CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 99 TIGKLLGHGQFGYTYVATDKA--NG--DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 99 ~~~~~lG~G~fg~V~~~~~~~--~~--~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.+.++||.|.||.||+|.... .| -.||||+.+.+. .+...+.|..|..+|+.+ +|||||+++|+|.+. ..||
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~--t~d~tekflqEa~iMrnf-dHphIikLIGv~~e~-P~Wi 467 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC--TPDDTEKFLQEASIMRNF-DHPHIIKLIGVCVEQ-PMWI 467 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC--ChhhHHHHHHHHHHHHhC-CCcchhheeeeeecc-ceeE
Confidence 345689999999999997642 23 358888765543 345688999999999999 699999999999865 4899
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||+++-|.|..+|..+ ...++......++.||+.||.|||+..+|||||-..|||+.+ ..
T Consensus 468 vmEL~~~GELr~yLq~n----------------k~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsS---p~ 528 (974)
T KOG4257|consen 468 VMELAPLGELREYLQQN----------------KDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSS---PQ 528 (974)
T ss_pred EEecccchhHHHHHHhc----------------cccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecC---cc
Confidence 99999999999988654 467888899999999999999999999999999999999985 67
Q ss_pred CeeEEecCCCcccCCCCCccccccCC--ccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhC
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~--~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~ 330 (577)
.|||+|||+++.+.+...+....|.. -|||||.++ ..++.++|||-|||.+||++. |..||.+-...++.-.+-.+
T Consensus 529 CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnG 608 (974)
T KOG4257|consen 529 CVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENG 608 (974)
T ss_pred eeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCC
Confidence 89999999999998777666555544 499999886 567999999999999999887 99999998777766666555
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHh
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il 368 (577)
.. .+..+.+|+.+..|+.+||.++|.+||+..++.
T Consensus 609 eR---lP~P~nCPp~LYslmskcWayeP~kRPrftei~ 643 (974)
T KOG4257|consen 609 ER---LPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIK 643 (974)
T ss_pred CC---CCCCCCCChHHHHHHHHHhccCcccCCcHHHHH
Confidence 42 233467999999999999999999999887754
No 383
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=4.5e-37 Score=306.63 Aligned_cols=250 Identities=26% Similarity=0.404 Sum_probs=199.6
Q ss_pred cceeeeeeecccCCeEEEEEEEc----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--C
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--D 169 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~ 169 (577)
+.|++.+.||+|+||.||+|... .++..||||.+...... .....+.+|+.+++.+ .||||+++++++.. .
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l-~~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTL-DHENIVKYKGVCEKPGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhC-CCCChheEEeeeecCCC
Confidence 36888899999999999999864 34789999998765431 3467899999999999 59999999999887 5
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
...++||||+++++|.+++... ...++...+..++.||+.||.|||+.|++||||||+||+++
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~----------------~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~- 143 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRH----------------RDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVE- 143 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhC----------------ccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc-
Confidence 6899999999999998877432 23588999999999999999999999999999999999998
Q ss_pred CCCCCCeeEEecCCCcccCCCCCc----cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChh---
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED--- 321 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~--- 321 (577)
.++.++|+|||++......... ....++..|+|||.+.+ .++.++|||||||++|+|++|..||......
T Consensus 144 --~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~ 221 (284)
T cd05038 144 --SEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR 221 (284)
T ss_pred --CCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc
Confidence 4689999999999876532221 12345567999998764 4588999999999999999999998653221
Q ss_pred -----------HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 322 -----------GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 322 -----------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
......+......+ ....++.++.+|+.+||..+|.+|||+.++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 222 MIGIAQGQMIVTRLLELLKEGERLP--RPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred ccccccccccHHHHHHHHHcCCcCC--CCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 11222333222222 22456789999999999999999999999875
No 384
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-38 Score=320.45 Aligned_cols=257 Identities=25% Similarity=0.335 Sum_probs=216.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCC---CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANG---DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~---~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
+...+.++||+|+||.|++|.|...+ ..||||++...... .....|.+|+.+|.+|. |||+++||++..+ ..+
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~--~~mddflrEas~M~~L~-H~hliRLyGvVl~-qp~ 185 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN--AIMDDFLREASHMLKLQ-HPHLIRLYGVVLD-QPA 185 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc--hhHHHHHHHHHHHHhcc-CcceeEEeeeecc-chh
Confidence 34667889999999999999886533 36899999766542 26789999999999995 9999999999987 568
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
.+|||+++.|+|++.|.+. ....|.......++.||+.|+.||.++++|||||-..|+||.+
T Consensus 186 mMV~ELaplGSLldrLrka---------------~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllas--- 247 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRKA---------------KKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLAS--- 247 (1039)
T ss_pred hHHhhhcccchHHHHHhhc---------------cccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecc---
Confidence 8999999999999988652 3466778888999999999999999999999999999999985
Q ss_pred CCCeeEEecCCCcccCCCCCccccc----cCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDIV----GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~~----gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
...|||+||||.+.+..++.+.... -...|+|||.++ ++++.++|||++||++|||++ |..||.+.....++++
T Consensus 248 prtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~ 327 (1039)
T KOG0199|consen 248 PRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKN 327 (1039)
T ss_pred cceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHh
Confidence 6789999999999887666544322 344699999987 567999999999999999999 8999999999999988
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
|-.+ ..+++ .+.+|+.+.++++.||..+|++|||+..|.+.-+..+.+
T Consensus 328 iD~~-erLpR--Pk~csedIY~imk~cWah~paDRptFsair~~~~l~eaq 375 (1039)
T KOG0199|consen 328 IDAG-ERLPR--PKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAEAQ 375 (1039)
T ss_pred cccc-ccCCC--CCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHhcC
Confidence 8743 33333 356899999999999999999999999998766666543
No 385
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-37 Score=308.27 Aligned_cols=254 Identities=22% Similarity=0.303 Sum_probs=207.7
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
......+.++||+|.||.|.+|. ...+..||||.++.... .....+|.+|+.+|.+|+ |||||.++++|..++.++
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCe-veg~lkVAVK~Lr~~a~--~~~r~~F~kEIkiLsqLk-hPNIveLvGVC~~DePic 611 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCE-VEGPLKVAVKILRPDAT--KNARNDFLKEIKILSRLK-HPNIVELLGVCVQDDPLC 611 (807)
T ss_pred chhheehhhhhcCcccceeEEEE-ecCceEEEEeecCcccc--hhHHHHHHHHHHHHhccC-CCCeeEEEeeeecCCchH
Confidence 34567888999999999999997 33468999999976643 335688999999999995 999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+|+||+++|+|.+++.+... ..+.......|+.||+.|+.||.+.++|||||.+.|+|++ .+
T Consensus 612 mI~EYmEnGDLnqFl~ahea---------------pt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~---~e 673 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHEL---------------PTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVD---GE 673 (807)
T ss_pred HHHHHHhcCcHHHHHHhccC---------------cccccchhHHHHHHHHHHHHHHHhhchhhccccccceeec---Cc
Confidence 99999999999998865511 1234455677999999999999999999999999999998 58
Q ss_pred CCeeEEecCCCcccCCCCCcc---ccccCCccccchh-cccCCCCCCchhhHHHHHHHHHh--CCCCCCCCChhHHHHHH
Q 008127 254 SSLKATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLC--GRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~---~~~gt~~y~aPE~-~~~~~~~~~DiwSlG~il~el~t--g~~Pf~~~~~~~~~~~i 327 (577)
+++||+|||+++.+-.+..+. ..+-..+|||||. +.+++++++|+|+||+++||+++ ...||...+.+++.++.
T Consensus 674 ~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~ 753 (807)
T KOG1094|consen 674 FTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENA 753 (807)
T ss_pred ccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhh
Confidence 999999999999765544332 3456789999995 57899999999999999999765 88999888887777665
Q ss_pred HhCCCC----CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 328 LRNKPD----FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 328 ~~~~~~----~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
-.-... .-....+-++..+.++|.+||..+.++|||.+++-.
T Consensus 754 ~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 754 GEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred hhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence 332111 111223457889999999999999999999999743
No 386
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=5.7e-36 Score=314.60 Aligned_cols=275 Identities=21% Similarity=0.266 Sum_probs=191.5
Q ss_pred ccceeeeeeecccCCeEEEEEEEc----------------CCCCEEEEEEecccccCch-----------hhHHHHHHHH
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDK----------------ANGDRVAVKKIEKNKMILP-----------IAVEDVKREV 147 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~----------------~~~~~vaiK~i~~~~~~~~-----------~~~~~~~~E~ 147 (577)
.++|.+.++||+|+||.||+|.+. ..++.||||.+........ ...+....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 458999999999999999999752 3456899999864321100 0112234567
Q ss_pred HHHHHhcCCCC-----eeEEEEEEEc--------CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHH-------hhhc
Q 008127 148 KILQALAGHEN-----VVKFYNAFED--------DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFL-------AIRK 207 (577)
Q Consensus 148 ~~l~~l~~hpn-----iv~~~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~-------~~~~ 207 (577)
.++.++. |.+ +++++++|.. .+..|+||||+++|+|.+++.............++ ....
T Consensus 224 ~~l~~l~-~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 224 YMCAKIK-RNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHhh-cccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 7777775 443 3667776643 35689999999999999988643211100000000 0111
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCCcccc--ccCCccccc
Q 008127 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI--VGSAYYVAP 285 (577)
Q Consensus 208 ~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~--~gt~~y~aP 285 (577)
...++...++.++.|++.+|.|||+.+|+||||||+|||++ .++.+||+|||++............ .+|+.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~---~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVT---VDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEEC---CCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 23467788999999999999999999999999999999998 4678999999999765443332222 348899999
Q ss_pred hhcccC---------------------C--CCCCchhhHHHHHHHHHhCCC-CCCCCChh----H-------HHHHHHhC
Q 008127 286 EVLKRK---------------------S--GPESDVWSIGVITYILLCGRR-PFWDKTED----G-------IFKEVLRN 330 (577)
Q Consensus 286 E~~~~~---------------------~--~~~~DiwSlG~il~el~tg~~-Pf~~~~~~----~-------~~~~i~~~ 330 (577)
|.+... + ..+.||||+|||+|+|++|.. ||.+.... . ..+.+...
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~ 459 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ 459 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence 986421 1 134799999999999999876 66432111 0 11111112
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCc---CCCCCHHHHhcCccccc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDP---RARLTAAQALSHPWVRE 375 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP---~~Rpt~~~il~hp~f~~ 375 (577)
.+....+..+++..++|+.+||..+| .+|+|+.++|+||||..
T Consensus 460 --~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 460 --KYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred --CCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 23334567789999999999999866 68999999999999975
No 387
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-37 Score=289.05 Aligned_cols=254 Identities=30% Similarity=0.516 Sum_probs=203.9
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC----
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN---- 170 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~---- 170 (577)
..+|.-++.+|.|+- .|-.|.|.-+++.||+|.+... ...........+|..++..+ +|+||++++.+|....
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p-f~n~~~akra~rel~l~~~v-~~~nii~l~n~ftP~~~l~~ 92 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP-FQNQTHAKRAYRELKLMKCV-NHKNIISLLNVFTPQKTLEE 92 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCc-cccCccchhhhhhhhhhhhh-cccceeeeeeccCccccHHH
Confidence 347888999999999 7888999999999999987655 22234456678999999999 5999999999997543
Q ss_pred --eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 171 --YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 171 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
.+|+|||||. .+|...+. ..+.-..+..++.|++.|+.|||+.||+||||||+||++.
T Consensus 93 ~~e~y~v~e~m~-~nl~~vi~-------------------~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~ 152 (369)
T KOG0665|consen 93 FQEVYLVMELMD-ANLCQVIL-------------------MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVN 152 (369)
T ss_pred HHhHHHHHHhhh-hHHHHHHH-------------------HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceec
Confidence 5899999994 57766553 3356778899999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.+..+||.|||+|+.-...-..+.++.|..|+|||++.+ .+.+.+||||+||++.||++|...|.+.+.-+.+.++
T Consensus 153 ---~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki 229 (369)
T KOG0665|consen 153 ---SDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKI 229 (369)
T ss_pred ---chhheeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHH
Confidence 478999999999987665545678899999999998765 4678899999999999999999999876654444333
Q ss_pred Hh----------------------CCCCC---------CCCCCCC-------CCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 328 LR----------------------NKPDF---------RRKPWPS-------ISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 328 ~~----------------------~~~~~---------~~~~~~~-------~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.. ..+++ +...|+. -+..+++++.+||..||++|++++++|+
T Consensus 230 ~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 230 IEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 21 11111 1111211 1235789999999999999999999999
Q ss_pred Ccccc
Q 008127 370 HPWVR 374 (577)
Q Consensus 370 hp~f~ 374 (577)
||||+
T Consensus 310 HPY~~ 314 (369)
T KOG0665|consen 310 HPYIK 314 (369)
T ss_pred CCeee
Confidence 99997
No 388
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=2.9e-35 Score=285.65 Aligned_cols=242 Identities=44% Similarity=0.761 Sum_probs=202.5
Q ss_pred CCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCCCchhHH
Q 008127 108 QFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDR 187 (577)
Q Consensus 108 ~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~ 187 (577)
+||.||+|.+..+|+.+|+|++....... ....+.+|+..++++ +|+||+++++.+......++++||+++++|.++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~ 77 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKK--KRERILREISILKKL-KHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDL 77 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEeccccccc--HHHHHHHHHHHHHhC-CCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHH
Confidence 58999999999899999999987654321 167899999999999 699999999999998999999999999999887
Q ss_pred HHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCccc
Q 008127 188 ILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267 (577)
Q Consensus 188 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~ 267 (577)
+... ..++...+..++.+++.++.|||+.+++|+||+|+||+++. ++.++|+|||.+...
T Consensus 78 ~~~~-----------------~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~---~~~~~l~d~~~~~~~ 137 (244)
T smart00220 78 LKKR-----------------GRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDE---DGHVKLADFGLARQL 137 (244)
T ss_pred HHhc-----------------cCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECC---CCcEEEccccceeee
Confidence 6432 23788999999999999999999999999999999999984 689999999999877
Q ss_pred CCCCCccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHhCCCCCCC-CChhHHHHHHHhCCCCCCCCCCCCCCHH
Q 008127 268 KPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNS 345 (577)
Q Consensus 268 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~tg~~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 345 (577)
..........++..|+|||.+. ...+.++||||||+++++|++|..||.. .........+....... ...+..++..
T Consensus 138 ~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 216 (244)
T smart00220 138 DPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF-PPPEWKISPE 216 (244)
T ss_pred ccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC-ccccccCCHH
Confidence 6554555678899999999876 4557899999999999999999999977 44444444444333222 2222227889
Q ss_pred HHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 346 AKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 346 ~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
+.+++.+||..+|.+||++.++++||||
T Consensus 217 ~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 217 AKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred HHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 9999999999999999999999999997
No 389
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=285.06 Aligned_cols=256 Identities=29% Similarity=0.444 Sum_probs=201.7
Q ss_pred eeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC-----eEE
Q 008127 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-----YVY 173 (577)
Q Consensus 99 ~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-----~~~ 173 (577)
+-.+.||.|+||.||.++|..+|+.||+|++..-.- .-...+.+.+|+.+|..++ |.|++..+++..... .+|
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq-~L~s~krvFre~kmLcfFk-HdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQ-NLASCKRVFREIKMLSSFR-HDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHH-HHHHHHHHHHHHHHHHhhc-cccHHHHHHhcCCCCchHHHHHH
Confidence 345679999999999999999999999998754221 1235677899999999996 999999998876543 367
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+|+|++. .+|...+ .....++..++.-+++||++||.|||+.+|.||||||.|.|+++ +
T Consensus 134 V~TELmQ-SDLHKII-----------------VSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNS---N 192 (449)
T KOG0664|consen 134 VLTELMQ-SDLHKII-----------------VSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNS---N 192 (449)
T ss_pred HHHHHHH-hhhhhee-----------------ccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEecc---C
Confidence 7777773 3443322 23477999999999999999999999999999999999999984 8
Q ss_pred CCeeEEecCCCcccCCCC--CccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 254 SSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
..+||||||+|+...... .++..+-|..|+|||++.| .|+.++||||.|||+.||+..+..|+..++-+.+..|..
T Consensus 193 CvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItd 272 (449)
T KOG0664|consen 193 CILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIID 272 (449)
T ss_pred ceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHH
Confidence 899999999998765433 3455678999999999875 579999999999999999999999988887666555432
Q ss_pred -----------------------CCCCCCCCC--C-----CCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 330 -----------------------NKPDFRRKP--W-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 330 -----------------------~~~~~~~~~--~-----~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
+.+..+... + ..-..+...++.++|..||.+|++..+++.|++..+..
T Consensus 273 LLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R 350 (449)
T KOG0664|consen 273 LLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGR 350 (449)
T ss_pred HhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccc
Confidence 111111000 0 11223678999999999999999999999999987753
No 390
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-36 Score=315.13 Aligned_cols=254 Identities=30% Similarity=0.496 Sum_probs=199.3
Q ss_pred eeeeeeecccCCeE-EEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 98 YTIGKLLGHGQFGY-TYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 98 y~~~~~lG~G~fg~-V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
|.-.+++|.|+.|+ ||+|. -.|+.||||++-.. ...-..+||..|+.-..|||||++|+.-.++.++||+.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~--ye~R~VAVKrll~e------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGV--YEGREVAVKRLLEE------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred eccHHHcccCCCCcEEEEEe--eCCceehHHHHhhH------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEe
Confidence 33456799999885 79996 56889999987543 44567899999998889999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC--CCCC
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA--KEDS 254 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~--~~~~ 254 (577)
|+| ..+|.+++.... . ..........+.++.|++.||.+||+.+||||||||.||||+.. ....
T Consensus 583 ELC-~~sL~dlie~~~--~-----------d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ 648 (903)
T KOG1027|consen 583 ELC-ACSLQDLIESSG--L-----------DVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTL 648 (903)
T ss_pred hHh-hhhHHHHHhccc--c-----------chhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcce
Confidence 999 568998875420 0 00111124567889999999999999999999999999999864 2346
Q ss_pred CeeEEecCCCcccCCCC----CccccccCCccccchhcccCC-CCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHH
Q 008127 255 SLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~-~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~ 328 (577)
.++|+|||+++.+..+. ...+..||-+|+|||++.... ..++||||||||+|+.++ |.+||.+.-. .-.+|+
T Consensus 649 ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~--R~~NIl 726 (903)
T KOG1027|consen 649 RAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLE--RQANIL 726 (903)
T ss_pred eEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHH--hhhhhh
Confidence 89999999999876543 234668999999999987654 678999999999999888 4999955432 334566
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.+........ +....++.+||.+|++++|..||+|.++|.||+|=..
T Consensus 727 ~~~~~L~~L~-~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ 773 (903)
T KOG1027|consen 727 TGNYTLVHLE-PLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS 773 (903)
T ss_pred cCccceeeec-cCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence 6655443221 1111289999999999999999999999999999654
No 391
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=261.82 Aligned_cols=216 Identities=25% Similarity=0.369 Sum_probs=181.9
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
...+..||+|+||.|-+.++..+|...|+|.+...-. .+..+...+|+++..+...+|.+|.+|+.+-.++.+||.||
T Consensus 48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn--~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME 125 (282)
T KOG0984|consen 48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN--SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICME 125 (282)
T ss_pred hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC--hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHH
Confidence 4446679999999999999999999999999875432 45677889999998888889999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-CceeccCCCCcEEeecCCCCCCe
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~-~iiHrDlKp~NILl~~~~~~~~v 256 (577)
.|.. +| +.+..+ .+.++...+|.-+-+|+..++.||+|||++ .+||||+||+|||++ ..|.|
T Consensus 126 ~M~t-Sl-dkfy~~------------v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn---~~GqV 188 (282)
T KOG0984|consen 126 LMDT-SL-DKFYRK------------VLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILIN---YDGQV 188 (282)
T ss_pred Hhhh-hH-HHHHHH------------HHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEc---cCCcE
Confidence 9952 44 444333 345678899999999999999999999985 899999999999998 58999
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhccc-----CCCCCCchhhHHHHHHHHHhCCCCCCC-CChhHHHHHHHhC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-----KSGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRN 330 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwSlG~il~el~tg~~Pf~~-~~~~~~~~~i~~~ 330 (577)
|+||||.+..+.++-..+--.|...|||||.+.. .|+-++||||||++++||.+++.||.. .++.+.++++...
T Consensus 189 KiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 189 KICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred EEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 9999999988765544444578899999998863 467899999999999999999999975 4677788888765
Q ss_pred CC
Q 008127 331 KP 332 (577)
Q Consensus 331 ~~ 332 (577)
..
T Consensus 269 p~ 270 (282)
T KOG0984|consen 269 PS 270 (282)
T ss_pred CC
Confidence 43
No 392
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00 E-value=3.9e-36 Score=292.35 Aligned_cols=256 Identities=30% Similarity=0.512 Sum_probs=201.7
Q ss_pred cccceeeeeeecccCCeEEEEEEEcC---CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKA---NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
+.+.|.++.+||.|+|+.||++.+.. ..+.||+|.+.... ....+.+|+++|..+.++.||+++.+++..++
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-----~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-----SPSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-----CchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 34568999999999999999999887 78899999986543 44668999999999999999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+.+|+||++..+..+++ ..++...++.+++.++.||.++|.+|||||||||.|+|++.
T Consensus 109 ~v~ivlp~~~H~~f~~l~--------------------~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~- 167 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLY--------------------RSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNR- 167 (418)
T ss_pred eeEEEecccCccCHHHHH--------------------hcCCHHHHHHHHHHHHHHhhhhhccCccccCCCcccccccc-
Confidence 999999999887766644 45678899999999999999999999999999999999985
Q ss_pred CCCCCeeEEecCCCccc-----------------CC--CC--------------------------CccccccCCccccc
Q 008127 251 KEDSSLKATDFGLSDFI-----------------KP--GK--------------------------KFQDIVGSAYYVAP 285 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~-----------------~~--~~--------------------------~~~~~~gt~~y~aP 285 (577)
..+.-.|+|||+|... .+ +. ......||++|+||
T Consensus 168 -~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaP 246 (418)
T KOG1167|consen 168 -RTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAP 246 (418)
T ss_pred -ccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCch
Confidence 5677899999998621 00 00 00124799999999
Q ss_pred hhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChh-HHHHHH--------------HhCC-----------------
Q 008127 286 EVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEV--------------LRNK----------------- 331 (577)
Q Consensus 286 E~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~-~~~~~i--------------~~~~----------------- 331 (577)
|++..- .++++||||.|||++.+++++.||.....+ +.+.++ +.+.
T Consensus 247 EvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~ 326 (418)
T KOG1167|consen 247 EVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRV 326 (418)
T ss_pred HHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHh
Confidence 998653 488999999999999999999999543211 000000 0000
Q ss_pred -------------CC--CCCCCCCC-CCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 332 -------------PD--FRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 332 -------------~~--~~~~~~~~-~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.. .....|.+ .+..+.+|+.+||+.||.+|+||+++|+||||.+.
T Consensus 327 ~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 327 NFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA 387 (418)
T ss_pred chhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence 00 00111112 34478999999999999999999999999999953
No 393
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-36 Score=304.84 Aligned_cols=260 Identities=28% Similarity=0.461 Sum_probs=217.5
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
+...+|.++..+|.|+||.||+++++.+++..|+|+++... .....-+.+|+-+++..+ |||||.+++.|.....+
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep---~dd~~~iqqei~~~~dc~-h~nivay~gsylr~dkl 87 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEP---GDDFSGIQQEIGMLRDCR-HPNIVAYFGSYLRRDKL 87 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccC---CccccccccceeeeecCC-CcChHHHHhhhhhhcCc
Confidence 34568999999999999999999999999999999986543 234566788999998884 99999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
||+||||.||+|.+... -.+.+++.++.++++..+.||+|||+.|-+|||||-.|||++ +
T Consensus 88 wicMEycgggslQdiy~-----------------~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanillt---d 147 (829)
T KOG0576|consen 88 WICMEYCGGGSLQDIYH-----------------VTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLT---D 147 (829)
T ss_pred EEEEEecCCCcccceee-----------------ecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeec---c
Confidence 99999999999987432 237899999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCC-CCccccccCCccccchhc----ccCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~----~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.+.||+.|||.+..+... .+...++|||.|||||+- .+.|+..+|||++|+...|+.--++|..+..+...+...
T Consensus 148 ~gDvklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~Lm 227 (829)
T KOG0576|consen 148 EGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLM 227 (829)
T ss_pred cCceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHh
Confidence 788999999998766432 334678999999999975 467899999999999999999988887776665554444
Q ss_pred HhCCCCCCC-CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 328 LRNKPDFRR-KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 328 ~~~~~~~~~-~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.+..+..+. ..-...++.+.+|++.+|.++|++|||++.+|.|||....
T Consensus 228 TkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 228 TKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred hccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence 333322221 2223467889999999999999999999999999998764
No 394
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-34 Score=280.79 Aligned_cols=248 Identities=24% Similarity=0.378 Sum_probs=190.6
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHh-cCCCCeeEEEEEEEcC-
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL-AGHENVVKFYNAFEDD- 169 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l-~~hpniv~~~~~~~~~- 169 (577)
..+.+...+.+.||+|.||+||+|.+ .|+.||||++... ....+.+|.+|.+.. ..|+||+.+++.=..+
T Consensus 207 RTiarqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~sr------dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~ 278 (513)
T KOG2052|consen 207 RTIARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSR------DERSWFRETEIYQTVMLRHENILGFIAADNKDN 278 (513)
T ss_pred HhhhheeEEEEEecCccccceeeccc--cCCceEEEEeccc------chhhhhhHHHHHHHHHhccchhhhhhhccccCC
Confidence 44667889999999999999999975 5889999998654 345678888887642 2599999999765432
Q ss_pred ---CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc--------Cceec
Q 008127 170 ---NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH--------GLVHR 238 (577)
Q Consensus 170 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~--------~iiHr 238 (577)
..+|||++|.+.|+|+|+|.+ ..++......++..++.||++||.. .|.||
T Consensus 279 gs~TQLwLvTdYHe~GSL~DyL~r------------------~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHR 340 (513)
T KOG2052|consen 279 GSWTQLWLVTDYHEHGSLYDYLNR------------------NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHR 340 (513)
T ss_pred CceEEEEEeeecccCCcHHHHHhh------------------ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcc
Confidence 269999999999999999853 5678899999999999999999963 49999
Q ss_pred cCCCCcEEeecCCCCCCeeEEecCCCcccCCCC-----CccccccCCccccchhcccCC-------CCCCchhhHHHHHH
Q 008127 239 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKRKS-------GPESDVWSIGVITY 306 (577)
Q Consensus 239 DlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~-------~~~~DiwSlG~il~ 306 (577)
|||..|||+. .++.+-|+|+|||....... ..+..+||.+|||||++.... ...+||||||.|+|
T Consensus 341 DlKSKNILVK---kn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlW 417 (513)
T KOG2052|consen 341 DLKSKNILVK---KNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLW 417 (513)
T ss_pred ccccccEEEc---cCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHH
Confidence 9999999998 58999999999997654331 235679999999999997643 33589999999999
Q ss_pred HHHhC----------CCCCCCCCh----hHHHHHHHhCC--CCCCCCCCCCCC--HHHHHHHHHccccCcCCCCCHHHHh
Q 008127 307 ILLCG----------RRPFWDKTE----DGIFKEVLRNK--PDFRRKPWPSIS--NSAKDFVKKLLVKDPRARLTAAQAL 368 (577)
Q Consensus 307 el~tg----------~~Pf~~~~~----~~~~~~i~~~~--~~~~~~~~~~~s--~~~~~li~~~l~~dP~~Rpt~~~il 368 (577)
|++.. ++||.+.-+ .+.++++..-. .+.....|...+ ..+..+|+.||..||..|.||-.+.
T Consensus 418 EiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriK 497 (513)
T KOG2052|consen 418 EIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIK 497 (513)
T ss_pred HHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence 99863 678865422 23344433221 111223344332 2467899999999999999987654
No 395
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-35 Score=291.21 Aligned_cols=200 Identities=35% Similarity=0.633 Sum_probs=174.9
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhh-----HHHHHHHHHHHHHhc--CCCCeeEEEEEEEcC
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA-----VEDVKREVKILQALA--GHENVVKFYNAFEDD 169 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~-----~~~~~~E~~~l~~l~--~hpniv~~~~~~~~~ 169 (577)
.|..++.||.|+||+|++|.++.+...|+||.|.+.+...... .-.+-.||+||..|. .|+||++++++|+++
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd 641 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD 641 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence 4999999999999999999999999999999998865532221 223567999999984 399999999999999
Q ss_pred CeEEEEEecc-CCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 170 NYVYIAMELC-EGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 170 ~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
+++||+||-- +|-+|++++.. ...++|.++..|+.||+.|+++||++||||||||-+|+.++
T Consensus 642 d~yyl~te~hg~gIDLFd~IE~-----------------kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd 704 (772)
T KOG1152|consen 642 DYYYLETEVHGEGIDLFDFIEF-----------------KPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVD 704 (772)
T ss_pred CeeEEEecCCCCCcchhhhhhc-----------------cCccchHHHHHHHHHHHhccccccccCceecccccccEEEe
Confidence 9999999986 45678887743 47899999999999999999999999999999999999999
Q ss_pred cCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccC-C-CCCCchhhHHHHHHHHHhCCCCCCC
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWD 317 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwSlG~il~el~tg~~Pf~~ 317 (577)
+ +|.+||+|||.|...+.+ .+..++||..|.|||++.|. | +.+-|||+||++||-+++..-||+.
T Consensus 705 ~---~g~~klidfgsaa~~ksg-pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 705 S---NGFVKLIDFGSAAYTKSG-PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred c---CCeEEEeeccchhhhcCC-CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 4 899999999999887744 56788999999999999875 3 8899999999999999999999853
No 396
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-33 Score=304.09 Aligned_cols=262 Identities=25% Similarity=0.368 Sum_probs=206.5
Q ss_pred ceeeeeeecccCCeEEEEEEEc----C---CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 97 RYTIGKLLGHGQFGYTYVATDK----A---NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~----~---~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
+..+.+.||+|+||.|++|.-. . ....||||.+..... ....+.+..|+.+|+.+..||||+.+++++...
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~--~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~ 374 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS--SSEKKDLMSELNVLKELGKHPNIVNLLGACTQD 374 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccC--cHHHHHHHHHHHHHHHhcCCcchhhheeeeccC
Confidence 3466779999999999999643 1 145799998865543 256788999999999998999999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcC--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD--SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
+.+++|+|||..|+|.++|............. .... ..++..+...++.||+.|++||++..+|||||-..|||+
T Consensus 375 ~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~---~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi 451 (609)
T KOG0200|consen 375 GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSG---VFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLI 451 (609)
T ss_pred CceEEEEEeccCCcHHHHHHhccccccccccC---CCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEe
Confidence 99999999999999999998763000000000 0011 248999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCcc--ccccC--Cccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCC-h
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQ--DIVGS--AYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKT-E 320 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~--~~~gt--~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~-~ 320 (577)
. ++..+||+|||+|+.......+. ...|+ ..|||||.+.. .++.++||||+||+|||+++ |..||.+.. .
T Consensus 452 ~---~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~ 528 (609)
T KOG0200|consen 452 T---KNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT 528 (609)
T ss_pred c---CCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH
Confidence 8 57899999999999765544432 12232 34999998875 57999999999999999999 999998865 5
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+++..+..+ ..... ...+++++.++++.||+.+|++||+..++.+
T Consensus 529 ~~l~~~l~~G-~r~~~--P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 529 EELLEFLKEG-NRMEQ--PEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred HHHHHHHhcC-CCCCC--CCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 5555534333 22222 2457899999999999999999999998865
No 397
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-34 Score=280.40 Aligned_cols=239 Identities=27% Similarity=0.405 Sum_probs=186.9
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc-CCCCeeEEEEEEEcCC----e
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA-GHENVVKFYNAFEDDN----Y 171 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~-~hpniv~~~~~~~~~~----~ 171 (577)
..++.++||+|.||.||+|. .+++.||||++.. +..+.|.+|-+|..... .|+||++++++-.... .
T Consensus 211 pl~l~eli~~Grfg~V~Kaq--L~~~~VAVKifp~------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e 282 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQ--LDNRLVAVKIFPE------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME 282 (534)
T ss_pred chhhHHHhhcCccceeehhh--ccCceeEEEecCH------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence 46778899999999999995 5679999999854 36788999988876432 6999999998766444 7
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc---------CceeccCCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH---------GLVHRDMKP 242 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~---------~iiHrDlKp 242 (577)
++||++|.+.|+|.++|..+ .++.....+++.-+++||.|||+- .|+|||||.
T Consensus 283 ywLVt~fh~kGsL~dyL~~n------------------tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkS 344 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLKAN------------------TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKS 344 (534)
T ss_pred eeEEeeeccCCcHHHHHHhc------------------cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccc
Confidence 99999999999999999654 568888999999999999999962 599999999
Q ss_pred CcEEeecCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcccCCC-------CCCchhhHHHHHHHHHhCC
Q 008127 243 ENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSG-------PESDVWSIGVITYILLCGR 312 (577)
Q Consensus 243 ~NILl~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~-------~~~DiwSlG~il~el~tg~ 312 (577)
.|||+. .+.++-|+|||+|..+.++.. ....+||.+|||||++.+..+ .+.||||+|.|||||++..
T Consensus 345 kNVLvK---~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC 421 (534)
T KOG3653|consen 345 KNVLVK---NDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRC 421 (534)
T ss_pred cceEEc---cCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999998 589999999999987765432 335799999999999987543 2479999999999999853
Q ss_pred C------------CCC-----CCChhHHHHHHHhCCC--CCCCCCCCC--CCHHHHHHHHHccccCcCCCCCHH
Q 008127 313 R------------PFW-----DKTEDGIFKEVLRNKP--DFRRKPWPS--ISNSAKDFVKKLLVKDPRARLTAA 365 (577)
Q Consensus 313 ~------------Pf~-----~~~~~~~~~~i~~~~~--~~~~~~~~~--~s~~~~~li~~~l~~dP~~Rpt~~ 365 (577)
. ||. ..+.+++...+...+. .++. .|.. -...+++.+..||..||+.|+|+.
T Consensus 422 ~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~-~W~~h~~~~~l~et~EeCWDhDaeARLTA~ 494 (534)
T KOG3653|consen 422 TDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPD-AWRKHAGMAVLCETIEECWDHDAEARLTAG 494 (534)
T ss_pred ccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChh-hhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence 2 332 1223344444444332 2221 1211 124578999999999999999985
No 398
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.1e-33 Score=328.76 Aligned_cols=240 Identities=20% Similarity=0.269 Sum_probs=182.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
..|.....||+|+||.||+|.+..+|..||||.+..... ....|+.+++++ +|||||+++++|...+..|+|
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l-~HpnIv~~~~~~~~~~~~~lv 761 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKL-QHPNIVKLIGLCRSEKGAYLI 761 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhC-CCCCcceEEEEEEcCCCCEEE
Confidence 356677889999999999999989999999998864321 113468889999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH---hcCceeccCCCCcEEeecCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH---LHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH---~~~iiHrDlKp~NILl~~~~~ 252 (577)
|||+++|+|.+++. .+++..+..++.||+.||.||| +.+|+||||||+||+++.
T Consensus 762 ~Ey~~~g~L~~~l~--------------------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~--- 818 (968)
T PLN00113 762 HEYIEGKNLSEVLR--------------------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDG--- 818 (968)
T ss_pred EeCCCCCcHHHHHh--------------------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECC---
Confidence 99999999988762 3678888999999999999999 669999999999999984
Q ss_pred CCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCCh--hHHHH---H
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFK---E 326 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~--~~~~~---~ 326 (577)
+...++. ||.+...... ....||+.|+|||++.+ .++.++|||||||++|||+||+.||..... ..+.. .
T Consensus 819 ~~~~~~~-~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~ 894 (968)
T PLN00113 819 KDEPHLR-LSLPGLLCTD---TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARY 894 (968)
T ss_pred CCceEEE-eccccccccC---CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHH
Confidence 4556654 6665443211 23378999999998765 468999999999999999999999853211 11111 1
Q ss_pred HHhCC-------CCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 327 VLRNK-------PDFRRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 327 i~~~~-------~~~~~~~--~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
..... +...... ......++.+++.+||..||++|||+.++++.
T Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 895 CYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred hcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 11000 0000000 00111256789999999999999999999764
No 399
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-34 Score=261.95 Aligned_cols=256 Identities=27% Similarity=0.416 Sum_probs=201.1
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEE-EEEcCCeE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYN-AFEDDNYV 172 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~-~~~~~~~~ 172 (577)
+.+.|.|.+.||+|.||.+.+|.++.++..+|+|.+.+.. ....+|.+|...--.|..|.||+..|+ .|+..+.+
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~----tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Y 97 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ----TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAY 97 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch----hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceE
Confidence 5568999999999999999999999999999999987664 357889999988778888999999887 57888899
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
++++||+|.|+|.+-+. ...+-|.....++.|++.||.|+|+.++||||||.+|||+-.. +
T Consensus 98 vF~qE~aP~gdL~snv~------------------~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~-d 158 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVE------------------AAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDA-D 158 (378)
T ss_pred EEeeccCccchhhhhcC------------------cccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecC-C
Confidence 99999999999987442 2457788899999999999999999999999999999999754 3
Q ss_pred CCCeeEEecCCCcccCCCCCccccccCCccccchhcc----cCC--CCCCchhhHHHHHHHHHhCCCCCCCCChh-HHH-
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----RKS--GPESDVWSIGVITYILLCGRRPFWDKTED-GIF- 324 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~----~~~--~~~~DiwSlG~il~el~tg~~Pf~~~~~~-~~~- 324 (577)
...|||||||+.+.....- ...--+..|.|||++. +++ .+.+|||.||+|+|.++||.+||+..... ..+
T Consensus 159 f~rvKlcDFG~t~k~g~tV--~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~ 236 (378)
T KOG1345|consen 159 FYRVKLCDFGLTRKVGTTV--KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYW 236 (378)
T ss_pred ccEEEeeecccccccCcee--hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHH
Confidence 5699999999987654322 2223456799999764 233 67789999999999999999999753322 222
Q ss_pred --HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCC---CCHHHHhcCcccc
Q 008127 325 --KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR---LTAAQALSHPWVR 374 (577)
Q Consensus 325 --~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R---pt~~~il~hp~f~ 374 (577)
.+.......-....+..+++.+..+.++-|..+|++| .++.......|..
T Consensus 237 ~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E 291 (378)
T KOG1345|consen 237 EWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKE 291 (378)
T ss_pred HHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHH
Confidence 2223322222223345588999999999999999999 5555555555543
No 400
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-33 Score=290.31 Aligned_cols=246 Identities=25% Similarity=0.337 Sum_probs=205.5
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCC----EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGD----RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~----~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
.+..++||.|+||+||+|.+...|+ +||||++.... .+....++..|+-+|.+| +|||++++++++.... +-
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t--~~~~s~e~LdeAl~masl-dHpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT--SPKASIELLDEALRMASL-DHPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC--CchhhHHHHHHHHHHhcC-CCchHHHHhhhcccch-HH
Confidence 4557789999999999999866554 68999876543 245678899999999999 6999999999998765 88
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
||++|+++|+|+|++... +..+-.+..+.|..||+.|+.|||.++++||||-..|||+.+ .
T Consensus 774 lvtq~mP~G~LlDyvr~h----------------r~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVks---P 834 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREH----------------RDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKS---P 834 (1177)
T ss_pred HHHHhcccchHHHHHHHh----------------hccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecC---C
Confidence 999999999999998654 467888999999999999999999999999999999999984 6
Q ss_pred CCeeEEecCCCcccCCCCC-ccccc--cCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHH
Q 008127 254 SSLKATDFGLSDFIKPGKK-FQDIV--GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~-~~~~~--gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~ 328 (577)
.+|||+|||+|+...+... +.... -.+.|||-|.+. ..++.++|||||||++||++| |..|+.+....++-..+-
T Consensus 835 ~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle 914 (1177)
T KOG1025|consen 835 NHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLE 914 (1177)
T ss_pred CeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHh
Confidence 7899999999998765433 22222 244699999765 567999999999999999998 999999998888776665
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+.. ... .|..+.++.-++.+||..|+..||+++++..
T Consensus 915 ~geR-Lsq--PpiCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 915 KGER-LSQ--PPICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred cccc-CCC--CCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 5543 333 3568889999999999999999999988754
No 401
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=1.9e-29 Score=238.75 Aligned_cols=212 Identities=42% Similarity=0.742 Sum_probs=182.5
Q ss_pred ecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCCCc
Q 008127 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183 (577)
Q Consensus 104 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 183 (577)
||.|++|.||++.+..+++.+++|++....... ....+.+|+.+++.+. |++|+++++++......++++|++++++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~~~~e~~~~~~ 77 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLN-HPNIVKLYGVFEDENHLYLVMEYCEGGS 77 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcC-CCCeeeEeeeeecCCeEEEEEecCCCCc
Confidence 689999999999988889999999987654211 3467899999999995 9999999999999999999999999999
Q ss_pred hhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCC
Q 008127 184 LLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263 (577)
Q Consensus 184 L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGl 263 (577)
|.+++... ...++...++.++.+++.+|.+||+.|++|+||+|.||+++. .++.++|+|||.
T Consensus 78 l~~~~~~~----------------~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~--~~~~~~l~d~~~ 139 (215)
T cd00180 78 LKDLLKEN----------------EGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDS--DNGKVKLADFGL 139 (215)
T ss_pred HHHHHHhc----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeC--CCCcEEEecCCc
Confidence 98876432 146889999999999999999999999999999999999983 157899999999
Q ss_pred CcccCCCC-CccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCC
Q 008127 264 SDFIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340 (577)
Q Consensus 264 a~~~~~~~-~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~ 340 (577)
+....... ......+...|++||.+.. .++.+.|+||+|+++++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------- 187 (215)
T cd00180 140 SKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------- 187 (215)
T ss_pred eEEccCCcchhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------
Confidence 98664332 1334568889999998876 557899999999999999
Q ss_pred CCCHHHHHHHHHccccCcCCCCCHHHHhcCc
Q 008127 341 SISNSAKDFVKKLLVKDPRARLTAAQALSHP 371 (577)
Q Consensus 341 ~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp 371 (577)
..+.+++.+|+..+|.+||++.++++|+
T Consensus 188 ---~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ---PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ---HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 5688999999999999999999999875
No 402
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=4.4e-29 Score=239.54 Aligned_cols=211 Identities=41% Similarity=0.688 Sum_probs=177.1
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
|.+.+.||.|++|.||+|.+..+++.+|+|.+...... .....+.+|+..++.+ +|+|++++++++......++++|
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~~v~e 77 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKL-KHPNIVKLYGVFEDPEPLYLVME 77 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhC-CCCChhhheeeeecCCceEEEEe
Confidence 56788999999999999999888999999998765432 2467889999999999 59999999999999899999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCC-CCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSR-YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
|+++++|.+.+... .. +++..+..++.+++.++.+||+.+++|+||+|.||+++. ++.+
T Consensus 78 ~~~~~~L~~~~~~~-----------------~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~---~~~~ 137 (225)
T smart00221 78 YCEGGDLFDYLRKK-----------------GGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGM---DGLV 137 (225)
T ss_pred ccCCCCHHHHHHhc-----------------ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC---CCCE
Confidence 99999998876432 23 788999999999999999999999999999999999984 5899
Q ss_pred eEEecCCCcccCCCC--CccccccCCccccchhcc-c-CCCCCCchhhHHHHHHHHHhCCCCCCC-CChh-HHHHHHHhC
Q 008127 257 KATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLK-R-KSGPESDVWSIGVITYILLCGRRPFWD-KTED-GIFKEVLRN 330 (577)
Q Consensus 257 kl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~-~-~~~~~~DiwSlG~il~el~tg~~Pf~~-~~~~-~~~~~i~~~ 330 (577)
+|+|||++....... ......++..|++||.+. . .++.++||||||+++++|++|+.||.. .... .+...+..+
T Consensus 138 ~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~ 217 (225)
T smart00221 138 KLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFG 217 (225)
T ss_pred EEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcC
Confidence 999999998765432 334567889999999873 2 346799999999999999999999977 4443 555555554
Q ss_pred C
Q 008127 331 K 331 (577)
Q Consensus 331 ~ 331 (577)
.
T Consensus 218 ~ 218 (225)
T smart00221 218 V 218 (225)
T ss_pred C
Confidence 4
No 403
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=1.5e-30 Score=294.59 Aligned_cols=198 Identities=21% Similarity=0.268 Sum_probs=145.4
Q ss_pred CCeeEEEEEE-------EcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHH
Q 008127 157 ENVVKFYNAF-------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAE 229 (577)
Q Consensus 157 pniv~~~~~~-------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~ 229 (577)
+||+.++++| .....++.++|++ +++|.+.|.. ....+++.+++.++.||+.||.|
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~----------------~~~~~~~~~~~~i~~qi~~al~~ 95 (793)
T PLN00181 33 DYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN----------------PDRSVDAFECFHVFRQIVEIVNA 95 (793)
T ss_pred HHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc----------------ccccccHHHHHHHHHHHHHHHHH
Confidence 5777777776 2234677888987 6699887632 13568999999999999999999
Q ss_pred HHhcCceeccCCCCcEEeecC----------------CCCCCeeEEecCCCcccCCCC-----------------Ccccc
Q 008127 230 CHLHGLVHRDMKPENFLFKSA----------------KEDSSLKATDFGLSDFIKPGK-----------------KFQDI 276 (577)
Q Consensus 230 LH~~~iiHrDlKp~NILl~~~----------------~~~~~vkl~DFGla~~~~~~~-----------------~~~~~ 276 (577)
||++|||||||||+||||+.. +.++.+||+|||+++...... .....
T Consensus 96 lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (793)
T PLN00181 96 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILA 175 (793)
T ss_pred HHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCccccccc
Confidence 999999999999999999631 234567888888876432100 01124
Q ss_pred ccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccc
Q 008127 277 VGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 355 (577)
Q Consensus 277 ~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~ 355 (577)
+||++|||||++.+ .++.++|||||||+||||++|.+|+.... .....+..... +.. +....+...+++.+||+
T Consensus 176 ~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~L~ 250 (793)
T PLN00181 176 MEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVL--PPQ-ILLNWPKEASFCLWLLH 250 (793)
T ss_pred CCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhc--Chh-hhhcCHHHHHHHHHhCC
Confidence 68999999998764 56899999999999999999998875322 12222221111 111 11123567789999999
Q ss_pred cCcCCCCCHHHHhcCcccccc
Q 008127 356 KDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 356 ~dP~~Rpt~~~il~hp~f~~~ 376 (577)
++|.+|||+.++|+||||...
T Consensus 251 ~~P~~Rps~~eil~h~~~~~~ 271 (793)
T PLN00181 251 PEPSCRPSMSELLQSEFINEP 271 (793)
T ss_pred CChhhCcChHHHhhchhhhhh
Confidence 999999999999999999864
No 404
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-27 Score=229.81 Aligned_cols=256 Identities=19% Similarity=0.229 Sum_probs=203.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCC-----CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-C
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANG-----DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-D 169 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~-----~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~ 169 (577)
.|+++..++-+|.||.||.|.++... +.|-+|.+.... .+.....+..|--++..+. |||+..+.+++.. .
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A--S~iQv~~~L~es~lly~~s-H~nll~V~~V~ie~~ 360 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA--SQIQVNLLLQESMLLYGAS-HPNLLSVLGVSIEDY 360 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc--cHHHHHHHHHHHHHHhcCc-CCCccceeEEEeecc
Confidence 36788889999999999999776432 346677765432 3456777888988888885 9999999998764 4
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
...++++.++..|+|..+|....... .+....++..+...++.|++.|++|||++||||.||-..|.+++
T Consensus 361 ~~P~V~y~~~~~gNLK~FL~~Cr~~~---------~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvId- 430 (563)
T KOG1024|consen 361 ATPFVLYPATGVGNLKSFLQICRGDD---------PSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVID- 430 (563)
T ss_pred CcceEEEeccCcchHHHHHHHhccCC---------CccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceeh-
Confidence 56788999999999988876332111 11235678888999999999999999999999999999999998
Q ss_pred CCCCCCeeEEecCCCcccCCCCCcc---ccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 324 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~~---~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~ 324 (577)
+.-.|||+|=.+++.+-+..... ..--...|||||.+. ..++.++|+|||||++|||+| |+.||-.-++.++.
T Consensus 431 --d~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~ 508 (563)
T KOG1024|consen 431 --DQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEME 508 (563)
T ss_pred --hheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHH
Confidence 57899999999998776543321 112245799999875 568999999999999999999 99999888888887
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.-+..+.. .. .+-++|.++..++..||...|++||+.+|+..
T Consensus 509 ~ylkdGyR-la--QP~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 509 HYLKDGYR-LA--QPFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred HHHhccce-ec--CCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 76666542 22 22468999999999999999999999998754
No 405
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=3.2e-29 Score=269.33 Aligned_cols=260 Identities=26% Similarity=0.405 Sum_probs=197.0
Q ss_pred cce-eeeeeecccCCeEEEEEEEcCCCCEEEEEEeccc--cc-CchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 96 RRY-TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKN--KM-ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 96 ~~y-~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~--~~-~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
+.| ....++|.|++|.|+.+......+.++.|..... .. ........+..|+-+-..| .|||++..+..+.+...
T Consensus 317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l-~h~~~~e~l~~~~~~~~ 395 (601)
T KOG0590|consen 317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSL-SHPNIIETLDIVQEIDG 395 (601)
T ss_pred cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccc-cCCchhhhHHHHhhccc
Confidence 345 4567899999999999988877777777755421 11 1111222256677777778 49999888777766555
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.+-+||||++ +|+..+... ..++..++-.++.|++.||.|+|+.||.||||||+|+++.
T Consensus 396 ~~~~mE~~~~-Dlf~~~~~~-----------------~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~--- 454 (601)
T KOG0590|consen 396 ILQSMEYCPY-DLFSLVMSN-----------------GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVT--- 454 (601)
T ss_pred chhhhhcccH-HHHHHHhcc-----------------cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEe---
Confidence 5555999999 998876432 5788999999999999999999999999999999999999
Q ss_pred CCCCeeEEecCCCcccCCC-----CCccccccCCccccchhcccC-C-CCCCchhhHHHHHHHHHhCCCCCCCCChhHHH
Q 008127 252 EDSSLKATDFGLSDFIKPG-----KKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~-----~~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~ 324 (577)
.++.+||+|||.+...... ......+|+..|+|||++.+. | ....||||.|++++.|++|+.||......+..
T Consensus 455 ~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~ 534 (601)
T KOG0590|consen 455 ENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNS 534 (601)
T ss_pred cCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccc
Confidence 5789999999998765322 223568999999999998765 4 56789999999999999999999654433221
Q ss_pred -HHHHhC----CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 325 -KEVLRN----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 325 -~~i~~~----~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
...... ...-+...+..++...+.+|.+||+.||.+|.|+++|++.+||+...
T Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 535 FKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE 592 (601)
T ss_pred hhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence 111100 01112223455788899999999999999999999999999999764
No 406
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.95 E-value=5.4e-27 Score=211.92 Aligned_cols=248 Identities=20% Similarity=0.293 Sum_probs=196.5
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
...|+++++||.|+||.+|+|....+|..||||+-... . ..-.+..|..+.+.|++-+.|+.+..+..+..+-.+
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~-a----~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvl 88 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK-A----KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVL 88 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc-C----CCcchhHHHHHHHHhccCCCCchhhhhcccccccee
Confidence 35799999999999999999999999999999975433 2 223467899999999888899999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||+++ |-+|.+.+.- ....|+...++.++-|++.-++|+|.+++|||||||+|+|..-.....
T Consensus 89 VMdLL-GPsLEdLfnf----------------C~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~ 151 (341)
T KOG1163|consen 89 VMDLL-GPSLEDLFNF----------------CSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCN 151 (341)
T ss_pred eeecc-CccHHHHHHH----------------HhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccc
Confidence 99998 7888875532 247789999999999999999999999999999999999997544566
Q ss_pred CeeEEecCCCcccCCCC--------CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCCh---hH
Q 008127 255 SLKATDFGLSDFIKPGK--------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTE---DG 322 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~--------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~---~~ 322 (577)
.+.|+|||+|+...+.. .-....||..|.+-....+. .+..-|+-|+|.+|..+..|..||++-.. .+
T Consensus 152 kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~Q 231 (341)
T KOG1163|consen 152 KLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQ 231 (341)
T ss_pred eEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHH
Confidence 79999999998765432 22356899999998766553 47789999999999999999999987543 44
Q ss_pred HHHHHHhCCCCCCC-CCCCCCCHHHHHHHHHccccCcCCCCCH
Q 008127 323 IFKEVLRNKPDFRR-KPWPSISNSAKDFVKKLLVKDPRARLTA 364 (577)
Q Consensus 323 ~~~~i~~~~~~~~~-~~~~~~s~~~~~li~~~l~~dP~~Rpt~ 364 (577)
.++.|...+...+. ..+..+|.++.-.+..|=..--++-|..
T Consensus 232 KyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy 274 (341)
T KOG1163|consen 232 KYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDY 274 (341)
T ss_pred HHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcH
Confidence 55666655443332 2345677888888887765544555543
No 407
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.95 E-value=6.5e-26 Score=229.71 Aligned_cols=255 Identities=22% Similarity=0.291 Sum_probs=191.8
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCC-CEEEEEEecccccCchhhHHHHHHHHHHHHHhc---CCCCeeEEEEEE-EcCCe
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALA---GHENVVKFYNAF-EDDNY 171 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~-~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~---~hpniv~~~~~~-~~~~~ 171 (577)
+|.+.+.||+|+||.||+|.+..++ ..+|+|......... ...+..|+.++..+. .-+++..+++.. ..+.+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~---~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK---PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC---CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 7999999999999999999987775 678888765542211 115778999999886 236999999999 57889
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.||||+++ |.+|.+..... ....++...+..++.|++.+|++||+.|+|||||||+|+++...+
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~---------------~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~ 159 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRN---------------PPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSS 159 (322)
T ss_pred eEEEEecc-CccHHHHHHhC---------------CCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCC
Confidence 99999999 88998854322 247899999999999999999999999999999999999998532
Q ss_pred CC--CCeeEEecCCCcccC---CCC-------C-ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCC
Q 008127 252 ED--SSLKATDFGLSDFIK---PGK-------K-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWD 317 (577)
Q Consensus 252 ~~--~~vkl~DFGla~~~~---~~~-------~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~ 317 (577)
.. ..+.|.|||+|+... ... . ...+.||..|+++.+..+. .+.+.|+||++.++.+|+.|..||.+
T Consensus 160 ~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~ 239 (322)
T KOG1164|consen 160 RSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEA 239 (322)
T ss_pred CcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCcc
Confidence 12 579999999998322 111 1 1235699999999988765 48999999999999999999999966
Q ss_pred CChhHHHHHHHhCCCCCCCC-CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 318 KTEDGIFKEVLRNKPDFRRK-PWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 318 ~~~~~~~~~i~~~~~~~~~~-~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
.........+.......... .....+.++.+++..+-..+...+|....+...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~ 293 (322)
T KOG1164|consen 240 LEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL 293 (322)
T ss_pred ccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence 55332233322221111111 123345677788877777788888887766553
No 408
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.94 E-value=2.5e-25 Score=225.74 Aligned_cols=259 Identities=36% Similarity=0.574 Sum_probs=205.9
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCC-CeeEEEEEEEcCCeEEEEE
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE-NVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hp-niv~~~~~~~~~~~~~lv~ 176 (577)
|.+.+.||.|+||.||++.+. ..+|+|.+.............+.+|+.++..+. |+ +|+.+++.+......++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 77 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLN-HPPNIVKLYDFFQDEGSLYLVM 77 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHcc-CCcceeeEEEEEecCCEEEEEE
Confidence 788899999999999999877 789999987765443335778999999999996 66 8999999998888899999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC-C
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS-S 255 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~-~ 255 (577)
+++.++++.+.+..... . ..+++..+..++.|++.++.|+|..+++|||+||+||+++. .. .
T Consensus 78 ~~~~~~~l~~~~~~~~~-------------~-~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~---~~~~ 140 (384)
T COG0515 78 EYVDGGSLEDLLKKIGR-------------K-GPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDR---DGRV 140 (384)
T ss_pred ecCCCCcHHHHHHhccc-------------c-cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecC---CCCe
Confidence 99999999854432200 0 36899999999999999999999999999999999999984 44 6
Q ss_pred eeEEecCCCcccCCCC-------CccccccCCccccchhccc----CCCCCCchhhHHHHHHHHHhCCCCCCCCCh----
Q 008127 256 LKATDFGLSDFIKPGK-------KFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTE---- 320 (577)
Q Consensus 256 vkl~DFGla~~~~~~~-------~~~~~~gt~~y~aPE~~~~----~~~~~~DiwSlG~il~el~tg~~Pf~~~~~---- 320 (577)
++++|||++....... .....+||..|+|||.+.+ ......|+||+|++++++++|..||.....
T Consensus 141 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~ 220 (384)
T COG0515 141 VKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSAT 220 (384)
T ss_pred EEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccH
Confidence 9999999997554332 2456789999999998875 457889999999999999999999877653
Q ss_pred hHHHHHHHhCCCC-CCCCCCCCC----CHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 321 DGIFKEVLRNKPD-FRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 321 ~~~~~~i~~~~~~-~~~~~~~~~----s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
......+...... ......... ...+.+++..++..+|..|.+..+...++|.....
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 282 (384)
T COG0515 221 SQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLK 282 (384)
T ss_pred HHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCcc
Confidence 3444444433322 222211111 25789999999999999999999999997766543
No 409
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.94 E-value=5e-27 Score=216.84 Aligned_cols=153 Identities=27% Similarity=0.343 Sum_probs=120.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchh
Q 008127 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV 287 (577)
Q Consensus 208 ~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~ 287 (577)
...+++..++.++.||+.||.|||+++ ||+|||++ .++.+|+ ||++....... ..||+.|+|||+
T Consensus 11 ~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~---~~~~~~~--fG~~~~~~~~~----~~g~~~y~aPE~ 75 (176)
T smart00750 11 GRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLT---WDGLLKL--DGSVAFKTPEQ----SRVDPYFMAPEV 75 (176)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEc---Cccceee--ccceEeecccc----CCCcccccChHH
Confidence 356999999999999999999999998 99999998 4788998 99998764322 268999999998
Q ss_pred ccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCCh-hHHHHHHHhCCCCCCC---CCCCCCCH--HHHHHHHHccccCcCC
Q 008127 288 LKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRNKPDFRR---KPWPSISN--SAKDFVKKLLVKDPRA 360 (577)
Q Consensus 288 ~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~-~~~~~~i~~~~~~~~~---~~~~~~s~--~~~~li~~~l~~dP~~ 360 (577)
+.+ .++.++|||||||++|||++|+.||..... ...+..+......... .....++. .+.++|.+||..+|.+
T Consensus 76 ~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~ 155 (176)
T smart00750 76 IQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQR 155 (176)
T ss_pred hcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhccccc
Confidence 865 468899999999999999999999976543 2334444333222111 11122333 6999999999999999
Q ss_pred CCCHHHHhcCccccc
Q 008127 361 RLTAAQALSHPWVRE 375 (577)
Q Consensus 361 Rpt~~~il~hp~f~~ 375 (577)
|||+.++++|+|+..
T Consensus 156 Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 156 REAANHYLAHCRALF 170 (176)
T ss_pred ccCHHHHHHHHHHHH
Confidence 999999999999864
No 410
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=2.6e-26 Score=216.69 Aligned_cols=210 Identities=23% Similarity=0.429 Sum_probs=174.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
-.|+|+++||+|+||+++.|.+..++++||||.-.... .. -.+..|.+..+.|.+.++|...|-+-..+.+-.||
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS-~A----PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS-EA----PQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC-Cc----chHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence 37999999999999999999999999999999754432 12 34678889999998899999999877888888899
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC--CC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--ED 253 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~--~~ 253 (577)
+|++ |-+|.|.+.- ....|+...++.++.|++.-++|+|++.+|+|||||+|+||...+ ..
T Consensus 103 idLL-GPSLEDLFD~----------------CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~ 165 (449)
T KOG1165|consen 103 IDLL-GPSLEDLFDL----------------CGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDA 165 (449)
T ss_pred hhhh-CcCHHHHHHH----------------hcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCC
Confidence 9999 8888875531 368899999999999999999999999999999999999998532 34
Q ss_pred CCeeEEecCCCcccCCCC--------CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCC---Chh
Q 008127 254 SSLKATDFGLSDFIKPGK--------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDK---TED 321 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~--------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~---~~~ 321 (577)
..|.|+|||+|+...+.. ......||.+||+-....|. .+..-|+-|||-+++..+.|..||++- +..
T Consensus 166 n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK 245 (449)
T KOG1165|consen 166 NVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNK 245 (449)
T ss_pred ceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchH
Confidence 579999999998765433 23456799999998765554 488899999999999999999999874 344
Q ss_pred HHHHHH
Q 008127 322 GIFKEV 327 (577)
Q Consensus 322 ~~~~~i 327 (577)
+.+++|
T Consensus 246 ~kYeKI 251 (449)
T KOG1165|consen 246 EKYEKI 251 (449)
T ss_pred HHHHHh
Confidence 455555
No 411
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.94 E-value=6.6e-28 Score=246.64 Aligned_cols=242 Identities=28% Similarity=0.478 Sum_probs=204.6
Q ss_pred eecccCCeEEEEEEE---cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEecc
Q 008127 103 LLGHGQFGYTYVATD---KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELC 179 (577)
Q Consensus 103 ~lG~G~fg~V~~~~~---~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 179 (577)
.+|+|+||.|++++. ...|..+|+|+..+......... ....|..++...++||.+|++...++.++.+++++++.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 379999999998753 24567899998876544322222 56678888888877999999999999999999999999
Q ss_pred CCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEE
Q 008127 180 EGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259 (577)
Q Consensus 180 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~ 259 (577)
.||+|..++ .+...+.+...+.+...++.+++++|+.+|+|||+|++||+++ .+|++++.
T Consensus 80 rgg~lft~l-----------------~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld---~~Ghi~~t 139 (612)
T KOG0603|consen 80 RGGDLFTRL-----------------SKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLL---LEGHIKLT 139 (612)
T ss_pred ccchhhhcc-----------------ccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeec---ccCccccC
Confidence 999997655 3457788899999999999999999999999999999999998 58999999
Q ss_pred ecCCCcccCCCCCccccccCCccccchhcccCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008127 260 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339 (577)
Q Consensus 260 DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 339 (577)
|||+++..-..+.. |||..|||||+++ .....+|+||+|++.++|+||..||.. ++...|+...+.++.
T Consensus 140 dfglske~v~~~~~---cgt~eymApEI~~-gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~--- 208 (612)
T KOG0603|consen 140 DFGLSKEAVKEKIA---CGTYEYRAPEIIN-GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPR--- 208 (612)
T ss_pred CchhhhHhHhhhhc---ccchhhhhhHhhh-ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCch---
Confidence 99999876543332 9999999999998 447889999999999999999999977 788888887776664
Q ss_pred CCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCccccccC
Q 008127 340 PSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREGG 377 (577)
Q Consensus 340 ~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~~ 377 (577)
.++..+++++..++..+|..|.- +.++++|+||....
T Consensus 209 -~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~ 250 (612)
T KOG0603|consen 209 -ELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSID 250 (612)
T ss_pred -hhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeee
Confidence 35688999999999999999985 47999999998753
No 412
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.94 E-value=3.6e-26 Score=230.77 Aligned_cols=175 Identities=20% Similarity=0.272 Sum_probs=133.5
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcC-CCCEEEEEEeccccc--CchhhHHHHHHHHHHHHHhcCCCCeeE-EEEEEEc
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKA-NGDRVAVKKIEKNKM--ILPIAVEDVKREVKILQALAGHENVVK-FYNAFED 168 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~-~~~~vaiK~i~~~~~--~~~~~~~~~~~E~~~l~~l~~hpniv~-~~~~~~~ 168 (577)
.+...|.+.+.||+|+||+||+|+++. +++.||||++..... ........+.+|+++|++|. |+||+. ++++
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~-h~~iv~~l~~~--- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVR-GIGVVPQLLAT--- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhcc-CCCCCcEEEEc---
Confidence 355689999999999999999998876 678889998753311 12234567999999999995 999885 4432
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccC-CCCcEEe
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM-KPENFLF 247 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDl-Kp~NILl 247 (577)
+..|+|||||+|++|.. +. ... ...++.|++.||.|||++||+|||| ||+|||+
T Consensus 91 -~~~~LVmE~~~G~~L~~-~~--------------------~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv 145 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHL-AR--------------------PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLM 145 (365)
T ss_pred -CCcEEEEEccCCCCHHH-hC--------------------ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEE
Confidence 45899999999998852 10 001 1457889999999999999999999 9999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCC---------CccccccCCccccchhcccCC-------CCCCchh
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGK---------KFQDIVGSAYYVAPEVLKRKS-------GPESDVW 299 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~-------~~~~Diw 299 (577)
+ .++.+||+|||+|+...... ......+++.|+|||.+.... +..+|-|
T Consensus 146 ~---~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 146 G---PDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred c---CCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 7 36789999999998654322 123567889999999986421 3456776
No 413
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.92 E-value=1.6e-25 Score=239.82 Aligned_cols=223 Identities=30% Similarity=0.507 Sum_probs=174.7
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
....|..+++|..|+||.||.++++.+.+++|+| +.+.... .+. ++... +.|.+|
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~li--------lRn--ilt~a-~npfvv------------- 135 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNLI--------LRN--ILTFA-GNPFVV------------- 135 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhc-ccccchh--------hhc--ccccc-CCccee-------------
Confidence 4457999999999999999999999999999994 5554321 111 23222 455555
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
|+-...+. .-+.++.. ++.+++|||+-||+|||+||+|.|++. -
T Consensus 136 --------gDc~tllk-----------------~~g~lPvd--------mvla~Eylh~ygivhrdlkpdnllIT~---m 179 (1205)
T KOG0606|consen 136 --------GDCATLLK-----------------NIGPLPVD--------MVLAVEYLHSYGIVHRDLKPDNLLITS---M 179 (1205)
T ss_pred --------chhhhhcc-----------------cCCCCcch--------hhHHhHhhccCCeecCCCCCCcceeee---c
Confidence 22222111 11333322 278999999999999999999999995 7
Q ss_pred CCeeEEecCCCcccCCC--------------CC--ccccccCCccccchhc-ccCCCCCCchhhHHHHHHHHHhCCCCCC
Q 008127 254 SSLKATDFGLSDFIKPG--------------KK--FQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITYILLCGRRPFW 316 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~--------------~~--~~~~~gt~~y~aPE~~-~~~~~~~~DiwSlG~il~el~tg~~Pf~ 316 (577)
+++|++|||+++..-.. .. -...||||.|+|||++ ...|+.++|||++|+|+|+.+.|..||.
T Consensus 180 GhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpff 259 (1205)
T KOG0606|consen 180 GHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFF 259 (1205)
T ss_pred ccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeecc
Confidence 89999999998753111 01 1246899999999975 4678999999999999999999999999
Q ss_pred CCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCC---CHHHHhcCccccccCC
Q 008127 317 DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL---TAAQALSHPWVREGGD 378 (577)
Q Consensus 317 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp---t~~~il~hp~f~~~~~ 378 (577)
+.++++++..++.....++...+ .++++++++|.++|+.+|..|. .+-++.+|+||+...-
T Consensus 260 Gdtpeelfg~visd~i~wpE~de-a~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw 323 (1205)
T KOG0606|consen 260 GDTPEELFGQVISDDIEWPEEDE-ALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDW 323 (1205)
T ss_pred CCCHHHHHhhhhhhhccccccCc-CCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeeccc
Confidence 99999999999998888887744 5789999999999999999997 6778899999997643
No 414
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.91 E-value=4.1e-24 Score=185.77 Aligned_cols=142 Identities=30% Similarity=0.533 Sum_probs=127.4
Q ss_pred hccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhh
Q 008127 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 488 (577)
Q Consensus 409 ~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~ 488 (577)
....++.+++++++++|..+|+|++|.|+..||..+| +.+|..+++.++.+||+.+|. +.|.|+|.+|+.+|.....
T Consensus 10 ~~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~il-r~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~- 86 (160)
T COG5126 10 TFTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKIL-RSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLK- 86 (160)
T ss_pred hcccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHH-HHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhc-
Confidence 4467899999999999999999999999999999999 579999999999999999999 9999999999998865432
Q ss_pred cccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 489 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 489 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
.... .++++.||+.||+|+||+|+..||+.+++.+| +++.+|+.+|.|+||.|+|+||++++...
T Consensus 87 -~~~~---~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~~ 157 (160)
T COG5126 87 -RGDK---EEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKDS 157 (160)
T ss_pred -cCCc---HHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhcc
Confidence 1222 24788999999999999999999999999988 49999999999999999999999988653
No 415
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=2.1e-23 Score=191.43 Aligned_cols=189 Identities=18% Similarity=0.266 Sum_probs=143.3
Q ss_pred eeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCch-hhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP-IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 99 ~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~-~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
.+...|+.|+||+||.+.. .+.+++.+.+.....+.. .+...+.+|+++|++|.+|++|++++++ +..|++||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 4567899999999998853 678888887766544222 2233578999999999777899999886 34699999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccC-CCCcEEeecCCCCCCe
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM-KPENFLFKSAKEDSSL 256 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDl-Kp~NILl~~~~~~~~v 256 (577)
|+.|.+|...+. .. ...++.|++.+|.++|++||+|||| ||+|||++ .++.+
T Consensus 79 yI~G~~L~~~~~-----------------------~~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~---~~g~i 131 (218)
T PRK12274 79 YLAGAAMYQRPP-----------------------RG-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQ---EDGSP 131 (218)
T ss_pred eecCccHHhhhh-----------------------hh-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEc---CCCCE
Confidence 999988854221 01 1347789999999999999999999 79999997 46789
Q ss_pred eEEecCCCcccCCCCCc--------------cccccCCccccchhcc--cCCC-CCCchhhHHHHHHHHHhCCCCCCCCC
Q 008127 257 KATDFGLSDFIKPGKKF--------------QDIVGSAYYVAPEVLK--RKSG-PESDVWSIGVITYILLCGRRPFWDKT 319 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~--------------~~~~gt~~y~aPE~~~--~~~~-~~~DiwSlG~il~el~tg~~Pf~~~~ 319 (577)
+|+|||+|......... .....++.|++|+... ...+ ...++++.|+-+|.++|+..|+++.+
T Consensus 132 ~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 132 AVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred EEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 99999999865433210 0123678888888432 2333 55688899999999999999998765
Q ss_pred h
Q 008127 320 E 320 (577)
Q Consensus 320 ~ 320 (577)
+
T Consensus 212 ~ 212 (218)
T PRK12274 212 E 212 (218)
T ss_pred C
Confidence 4
No 416
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.90 E-value=2e-23 Score=186.61 Aligned_cols=143 Identities=29% Similarity=0.541 Sum_probs=124.8
Q ss_pred cchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccc
Q 008127 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 492 (577)
Q Consensus 413 ~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~ 492 (577)
++.++..+++++|..||+|++|+|+..||..++ +.+|..+++.++..+++.+|.|++|.|+|+||+.++..........
T Consensus 2 ~~~~~~~el~~~F~~fD~d~~G~i~~~el~~~l-r~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~ 80 (151)
T KOG0027|consen 2 LSEEQILELKEAFQLFDKDGDGKISVEELGAVL-RSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDE 80 (151)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcccHHHHHHHH-HHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccc
Confidence 356778899999999999999999999999999 6699999999999999999999999999999998776533222211
Q ss_pred cHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 493 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 493 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
. .....+++||+.||+|++|+|+++||+.+|...| +++.+++.+|.|+||.|+|+||+++|...
T Consensus 81 ~-~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~~ 150 (151)
T KOG0027|consen 81 E-ASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMSGK 150 (151)
T ss_pred c-ccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhcC
Confidence 1 1134789999999999999999999999999888 49999999999999999999999999753
No 417
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.90 E-value=2.6e-23 Score=195.31 Aligned_cols=175 Identities=15% Similarity=0.128 Sum_probs=132.0
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHH------HHHHHHHHHHhcCCCCeeEEEEEE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED------VKREVKILQALAGHENVVKFYNAF 166 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~------~~~E~~~l~~l~~hpniv~~~~~~ 166 (577)
-+..+|+++++||.|+||.||++.. ++..+|||++.......+..... +.+|+..+.++ .||+|..+.+++
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL-~~~GI~~~~d~~ 104 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRV-RSEGLASLNDFY 104 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHH-HHCCCCcceEee
Confidence 3567999999999999999999754 57789999987554333333333 68999999999 599999999886
Q ss_pred EcC--------CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceec
Q 008127 167 EDD--------NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 238 (577)
Q Consensus 167 ~~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHr 238 (577)
... +..+|||||++|.+|.+.. .+++ ..+.+++.+|..||..|++||
T Consensus 105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~---------------------~~~~----~~~~~i~~~l~~lH~~gi~H~ 159 (232)
T PRK10359 105 LLAERKTLRYAHTYIMLIEYIEGVELNDMP---------------------EISE----DVKAKIKASIESLHQHGMVSG 159 (232)
T ss_pred eecccccccccCCeEEEEEEECCccHHHhh---------------------hccH----HHHHHHHHHHHHHHHcCCccC
Confidence 633 3589999999999886632 1222 245699999999999999999
Q ss_pred cCCCCcEEeecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccCCCCCCchhhHHHHHHHHH
Q 008127 239 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILL 309 (577)
Q Consensus 239 DlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~ 309 (577)
|+||+||+++. ++ ++|+|||.+........... | ++...+..++|+||||+++..+.
T Consensus 160 Dikp~Nili~~---~g-i~liDfg~~~~~~e~~a~d~------~----vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 160 DPHKGNFIVSK---NG-LRIIDLSGKRCTAQRKAKDR------I----DLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCChHHEEEeC---CC-EEEEECCCcccccchhhHHH------H----HHHhHhcccccccceeEeehHHH
Confidence 99999999984 45 99999998765432111100 0 22344567899999999887654
No 418
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.90 E-value=2.8e-23 Score=193.11 Aligned_cols=142 Identities=20% Similarity=0.215 Sum_probs=108.1
Q ss_pred eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchh-----------------------hHHHHHHHHHHHHHhcCCC
Q 008127 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPI-----------------------AVEDVKREVKILQALAGHE 157 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~-----------------------~~~~~~~E~~~l~~l~~hp 157 (577)
...||+|+||.||+|.+. +|+.||||++......... ......+|+.++.++. ++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~ 79 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLV-TA 79 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHH-HC
Confidence 457999999999999986 8999999998654211000 0123346999999995 77
Q ss_pred CeeEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH-HhcCce
Q 008127 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAEC-HLHGLV 236 (577)
Q Consensus 158 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~L-H~~~ii 236 (577)
++.....+.... .+|||||++|+++..... ....++...++.++.|++.+|.|| |+.||+
T Consensus 80 ~v~~p~~~~~~~--~~iVmE~i~g~~l~~~~~-----------------~~~~~~~~~~~~i~~qi~~~L~~l~H~~gii 140 (190)
T cd05147 80 GIPCPEPILLKS--HVLVMEFIGDDGWAAPRL-----------------KDAPLSESKARELYLQVIQIMRILYQDCRLV 140 (190)
T ss_pred CCCCCcEEEecC--CEEEEEEeCCCCCcchhh-----------------hcCCCCHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 764333222222 389999999877654322 235788999999999999999999 799999
Q ss_pred eccCCCCcEEeecCCCCCCeeEEecCCCccc
Q 008127 237 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267 (577)
Q Consensus 237 HrDlKp~NILl~~~~~~~~vkl~DFGla~~~ 267 (577)
||||||+|||++ ++.++|+|||+|...
T Consensus 141 HrDlkP~NIli~----~~~v~LiDFG~a~~~ 167 (190)
T cd05147 141 HADLSEYNLLYH----DGKLYIIDVSQSVEH 167 (190)
T ss_pred cCCCCHHHEEEE----CCcEEEEEccccccC
Confidence 999999999997 367999999999754
No 419
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.89 E-value=3.1e-23 Score=200.57 Aligned_cols=241 Identities=23% Similarity=0.351 Sum_probs=151.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcC---------CCCeeEEEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG---------HENVVKFYNAFE 167 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~---------hpniv~~~~~~~ 167 (577)
.+...+.||.|+++.||.+++..||+.+|+|++...........+.+.+|.-....+.+ |-.++.-++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 46778899999999999999999999999998765543334466777777654443321 223333333221
Q ss_pred ------------cCC-----eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Q 008127 168 ------------DDN-----YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAEC 230 (577)
Q Consensus 168 ------------~~~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~L 230 (577)
... ..+++|+-+ -++|.+.+..-.. .-.....+.......+..|++..+++|
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~----------~~~~~~~l~~~arl~lT~Q~I~lvA~L 161 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFS----------RAQTHSPLAFAARLSLTVQMIRLVANL 161 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHH----------HTTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhh----------cccccchhHHHHHHHHHHHHHHHHHHH
Confidence 111 246788887 5688765532110 000001122223345668999999999
Q ss_pred HhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc---------CCCCCCchhhH
Q 008127 231 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---------KSGPESDVWSI 301 (577)
Q Consensus 231 H~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~DiwSl 301 (577)
|..|++|+||||+|++++ .+|.++|+||+...... ........+..|.|||.... .++.+.|.|+|
T Consensus 162 h~~GlVHgdi~~~nfll~---~~G~v~Lg~F~~~~r~g--~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~L 236 (288)
T PF14531_consen 162 HSYGLVHGDIKPENFLLD---QDGGVFLGDFSSLVRAG--TRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQL 236 (288)
T ss_dssp HHTTEEEST-SGGGEEE----TTS-EEE--GGGEEETT--EEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHH
T ss_pred hhcceEecccceeeEEEc---CCCCEEEcChHHHeecC--ceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHH
Confidence 999999999999999998 58999999998775443 22222345678999997643 23677899999
Q ss_pred HHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCC
Q 008127 302 GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 361 (577)
Q Consensus 302 G~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R 361 (577)
|+++|.|.+|..||........... ....+.++|..++.||..+|++||.+|
T Consensus 237 G~~ly~lWC~~lPf~~~~~~~~~~~--------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 237 GITLYSLWCGRLPFGLSSPEADPEW--------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHHHHSS-STCCCGGGSTSGG--------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHHHHHccCCCCCCCccccccc--------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 9999999999999965543221111 122234678999999999999999988
No 420
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.88 E-value=9.8e-23 Score=196.73 Aligned_cols=191 Identities=25% Similarity=0.414 Sum_probs=140.4
Q ss_pred cCCCCeeEEEEEEEc---------------------------CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhh
Q 008127 154 AGHENVVKFYNAFED---------------------------DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206 (577)
Q Consensus 154 ~~hpniv~~~~~~~~---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~ 206 (577)
..|||||.++..|.+ ...+|+||.-++ .+|.+++.
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~----------------- 334 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLW----------------- 334 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHh-----------------
Confidence 369999999887633 246899999884 47777663
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC-CCCCCeeEEecCCCcccCC-------CCCcccccc
Q 008127 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA-KEDSSLKATDFGLSDFIKP-------GKKFQDIVG 278 (577)
Q Consensus 207 ~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~-~~~~~vkl~DFGla~~~~~-------~~~~~~~~g 278 (577)
....+....+.++.|+++|+.|||.+||.|||||.+|||+.-. ++-..+.|+|||.+---+. ....-..-|
T Consensus 335 -~~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GG 413 (598)
T KOG4158|consen 335 -TRHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGG 413 (598)
T ss_pred -cCCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCC
Confidence 2456778888999999999999999999999999999999743 2235688999997642211 111223457
Q ss_pred CCccccchhcccCC-------CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHH
Q 008127 279 SAYYVAPEVLKRKS-------GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 351 (577)
Q Consensus 279 t~~y~aPE~~~~~~-------~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 351 (577)
...-||||+....+ ..++|.|+.|.+.||+++..-||++..+..+-..-.+ .-+.+ .....+++.+++++.
T Consensus 414 Na~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yq-e~qLP-alp~~vpp~~rqlV~ 491 (598)
T KOG4158|consen 414 NAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQ-ESQLP-ALPSRVPPVARQLVF 491 (598)
T ss_pred cceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhh-hhhCC-CCcccCChHHHHHHH
Confidence 88899999987543 4589999999999999999999987543321111111 01111 122457899999999
Q ss_pred HccccCcCCCCCHH
Q 008127 352 KLLVKDPRARLTAA 365 (577)
Q Consensus 352 ~~l~~dP~~Rpt~~ 365 (577)
.+|+.||.+|+++.
T Consensus 492 ~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 492 DLLKRDPSKRVSPN 505 (598)
T ss_pred HHhcCCccccCCcc
Confidence 99999999999854
No 421
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.88 E-value=6.4e-22 Score=184.73 Aligned_cols=143 Identities=20% Similarity=0.242 Sum_probs=110.7
Q ss_pred eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCc---------------------h--hhHHHHHHHHHHHHHhcCCC
Q 008127 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL---------------------P--IAVEDVKREVKILQALAGHE 157 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~---------------------~--~~~~~~~~E~~~l~~l~~hp 157 (577)
...||+|+||.||+|.+. +|+.||||++....... . .....+.+|...+.++. |+
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~ 79 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY-EA 79 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH-hC
Confidence 467999999999999977 89999999987642110 0 01223468899999995 88
Q ss_pred CeeEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCce
Q 008127 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLV 236 (577)
Q Consensus 158 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~ii 236 (577)
++.....+.... .||||||++|+++..... ....++...+..++.|++.+|.++|+ .||+
T Consensus 80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l-----------------~~~~~~~~~~~~i~~~l~~~l~~lH~~~giv 140 (190)
T cd05145 80 GVPVPEPILLKK--NVLVMEFIGDDGSPAPRL-----------------KDVPLEEEEAEELYEQVVEQMRRLYQEAGLV 140 (190)
T ss_pred CCCCceEEEecC--CEEEEEEecCCCchhhhh-----------------hhccCCHHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 875444433332 489999999886543221 12457888999999999999999999 9999
Q ss_pred eccCCCCcEEeecCCCCCCeeEEecCCCcccC
Q 008127 237 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268 (577)
Q Consensus 237 HrDlKp~NILl~~~~~~~~vkl~DFGla~~~~ 268 (577)
||||||+|||++ ++.++|+|||+|....
T Consensus 141 HrDlkP~NIll~----~~~~~liDFG~a~~~~ 168 (190)
T cd05145 141 HGDLSEYNILYH----DGKPYIIDVSQAVELD 168 (190)
T ss_pred cCCCChhhEEEE----CCCEEEEEcccceecC
Confidence 999999999997 4689999999998764
No 422
>PRK10345 hypothetical protein; Provisional
Probab=99.87 E-value=2.4e-21 Score=181.65 Aligned_cols=138 Identities=21% Similarity=0.320 Sum_probs=107.5
Q ss_pred eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc----CCCCeeEEEEEEEcC---CeEE
Q 008127 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA----GHENVVKFYNAFEDD---NYVY 173 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~----~hpniv~~~~~~~~~---~~~~ 173 (577)
.+.||+|+||.||. ++.++.. +||++..... ...+.+.+|+.+++.|. +||||++++++++++ +.++
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~---~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD---GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEecccc---chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 45799999999995 6777766 6998865432 24467899999999994 379999999999876 3544
Q ss_pred -EEEec--cCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHH-HHHHhcCceeccCCCCcEEeec
Q 008127 174 -IAMEL--CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVA-AECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 174 -lv~e~--~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l-~~LH~~~iiHrDlKp~NILl~~ 249 (577)
+|+|| +++|+|.+++.+ ..+++. ..++.|++.++ .|||+++||||||||+|||++.
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~------------------~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~ 140 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQ------------------CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQR 140 (210)
T ss_pred EEEecCCCCcchhHHHHHHc------------------ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEec
Confidence 78999 558999987732 235555 35678888888 9999999999999999999985
Q ss_pred CC-CCCCeeEEecCCC
Q 008127 250 AK-EDSSLKATDFGLS 264 (577)
Q Consensus 250 ~~-~~~~vkl~DFGla 264 (577)
.+ .+..++|+||+.+
T Consensus 141 ~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 141 ISESEVIPVVCDNIGE 156 (210)
T ss_pred cCCCCCcEEEEECCCC
Confidence 32 2458999995433
No 423
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.86 E-value=1.5e-22 Score=186.10 Aligned_cols=241 Identities=17% Similarity=0.191 Sum_probs=186.8
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
..++.+|.....|+.|+|++. |..+++|++....+. +.....|..|.-.|+-+. ||||+.+++.|.....+.++..
T Consensus 192 lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t-~risrdfneefp~lrifs-hpnilpvlgacnsppnlv~isq 267 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVT-ARISRDFNEEFPALRIFS-HPNILPVLGACNSPPNLVIISQ 267 (448)
T ss_pred hhhhhhhccCCCccccccccc--Ccchhhhhhhhhhcc-hhhcchhhhhCcceeeec-CCchhhhhhhccCCCCceEeee
Confidence 455667899999999999865 556778887665543 334466888888888885 9999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC--ceeccCCCCcEEeecCCCCCC
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~--iiHrDlKp~NILl~~~~~~~~ 255 (577)
||+.|+|+..|... ..--....++..++.+|++|+.|||+.. |.---|....++++ ++.+
T Consensus 268 ~mp~gslynvlhe~---------------t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmid---edlt 329 (448)
T KOG0195|consen 268 YMPFGSLYNVLHEQ---------------TSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMID---EDLT 329 (448)
T ss_pred eccchHHHHHHhcC---------------ccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEec---chhh
Confidence 99999999988654 1233566789999999999999999963 44446888889998 3444
Q ss_pred eeE--EecCCCcccCCCCCccccccCCccccchhcccCC----CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 256 LKA--TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 256 vkl--~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
.+| +|--++... ....-.|.||+||.+..++ -.++|+|||++++|||.|...||.+-++.+.-.+|..
T Consensus 330 arismad~kfsfqe------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkial 403 (448)
T KOG0195|consen 330 ARISMADTKFSFQE------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIAL 403 (448)
T ss_pred hheecccceeeeec------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhh
Confidence 444 343222111 1223468899999997654 3578999999999999999999999888887777755
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHh
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il 368 (577)
..... ...|.++..+..|+.-|+..||.+||....++
T Consensus 404 eglrv--~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 404 EGLRV--HIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred ccccc--cCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 44432 33478999999999999999999999876653
No 424
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.86 E-value=2.5e-22 Score=215.52 Aligned_cols=245 Identities=24% Similarity=0.298 Sum_probs=170.9
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEeccccc-CchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM-ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.|...+.||.+.|=+|.+|++. .| .|+||++-+... ..-....+...|++ . .+.+|||++.+.-+...+...|||
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~-~l~~~pn~lPfqk~~~t~kAAylv 99 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EG-LVVVKVFVKQDPTISLRPFKQRLEEIK-F-ALMKAPNCLPFQKVLVTDKAAYLV 99 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cc-eEEEEEEeccCCCCCchHHHHHHHHHH-H-HhhcCCcccchHHHHHhhHHHHHH
Confidence 5778889999999999999865 35 499999866542 11112233334444 2 333699999988777777888889
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
-+|. ..+|+|+|- -+..+..-+.+-|+.||+.||.-+|..||+|+|||.+|||+++ -.-
T Consensus 100 Rqyv-khnLyDRlS-----------------TRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTS---WNW 158 (1431)
T KOG1240|consen 100 RQYV-KHNLYDRLS-----------------TRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITS---WNW 158 (1431)
T ss_pred HHHH-hhhhhhhhc-----------------cchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEee---ech
Confidence 8988 458888763 2355677788889999999999999999999999999999995 557
Q ss_pred eeEEecCCCcccC--C--CCCcc----ccccCCccccchhcccC------------CCCCCchhhHHHHHHHHHh-CCCC
Q 008127 256 LKATDFGLSDFIK--P--GKKFQ----DIVGSAYYVAPEVLKRK------------SGPESDVWSIGVITYILLC-GRRP 314 (577)
Q Consensus 256 vkl~DFGla~~~~--~--~~~~~----~~~gt~~y~aPE~~~~~------------~~~~~DiwSlG~il~el~t-g~~P 314 (577)
+.|+||..-+..- . ...+. +..--..|+|||.+... ..++.||||+||+++||++ |++|
T Consensus 159 ~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~Pl 238 (1431)
T KOG1240|consen 159 LYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPL 238 (1431)
T ss_pred hhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCc
Confidence 9999998765321 1 11121 11222359999987431 2467899999999999998 7899
Q ss_pred CCCCChhHHHHHHHhCCCCCCCCCCCC-CCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 315 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 315 f~~~~~~~~~~~i~~~~~~~~~~~~~~-~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
|.- ..+-.+.++....+...... -+..++.+|..|++.||.+|.+|++.|+.
T Consensus 239 F~L----SQL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 239 FTL----SQLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred ccH----HHHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 821 01111111110000000000 12358899999999999999999999885
No 425
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=1.6e-20 Score=205.92 Aligned_cols=196 Identities=24% Similarity=0.359 Sum_probs=156.9
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc--CCCCeeEEEEEEEcCCeE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~~~~~ 172 (577)
...|.|.+.||.|+||+||+|.+.. |+.||+|+-.....|.---.. +++.+|+ --|-|..+..++...+.-
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~------q~~~RLk~~~~~~~~~~~~a~~~~~~S 769 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICL------QVMERLKPQMLPSIMHISSAHVFQNAS 769 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehH------HHHHhhchhhhcchHHHHHHHccCCcc
Confidence 3579999999999999999999766 999999976555443221122 2233331 135566666666667778
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC--
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA-- 250 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~-- 250 (577)
++|+||.+.|+|++.+. ..+.+++..+..+..|++..|+.||..+|||+||||+|+||...
T Consensus 770 ~lv~ey~~~Gtlld~~N-----------------~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~ 832 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLIN-----------------TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREIC 832 (974)
T ss_pred eeeeeccccccHHHhhc-----------------cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccC
Confidence 89999999999999763 34778899999999999999999999999999999999999642
Q ss_pred --CCCCCeeEEecCCCccc---CCCCCccccccCCccccchhcccCC-CCCCchhhHHHHHHHHHhCCCC
Q 008127 251 --KEDSSLKATDFGLSDFI---KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRP 314 (577)
Q Consensus 251 --~~~~~vkl~DFGla~~~---~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~DiwSlG~il~el~tg~~P 314 (577)
.....++|+|||.|..+ .++..+...++|-.+-.+|+..|++ +..+|.|.|+.+++.|+.|+.-
T Consensus 833 ~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 833 ADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred CCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 23567999999998654 4556778889999999999998865 8899999999999999998653
No 426
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.82 E-value=7.1e-20 Score=154.56 Aligned_cols=141 Identities=27% Similarity=0.483 Sum_probs=126.2
Q ss_pred ccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhc
Q 008127 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 489 (577)
Q Consensus 410 ~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~ 489 (577)
...+.+++..+++..|..||.+++|+|+..||..++ +++|+.+...++..|+..+|.++.|.|+|++|..++.......
T Consensus 24 ~~~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAm-ralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~ 102 (172)
T KOG0028|consen 24 KSELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAM-RALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGER 102 (172)
T ss_pred CccccHHHHhhHHHHHHhhccCCCCcccHHHHHHHH-HHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhcc
Confidence 345677888999999999999999999999999999 6799999999999999999999999999999999876543322
Q ss_pred ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 490 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 490 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
. + ...++.+|+.+|.|++|.||..+|+.+...+| ++.+|++++|.|+||.|+-+||..+|++
T Consensus 103 d--t---~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 103 D--T---KEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred C--c---HHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccccccHHHHHHHHhc
Confidence 2 2 34788999999999999999999999998888 4899999999999999999999999975
No 427
>smart00090 RIO RIO-like kinase.
Probab=99.82 E-value=1e-19 Score=174.97 Aligned_cols=146 Identities=24% Similarity=0.231 Sum_probs=112.1
Q ss_pred ceeeeeeecccCCeEEEEEE-EcCCCCEEEEEEecccccCc-------------------h--hhHHHHHHHHHHHHHhc
Q 008127 97 RYTIGKLLGHGQFGYTYVAT-DKANGDRVAVKKIEKNKMIL-------------------P--IAVEDVKREVKILQALA 154 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~-~~~~~~~vaiK~i~~~~~~~-------------------~--~~~~~~~~E~~~l~~l~ 154 (577)
-|.+.+.||+|+||.||+|. +..+|+.||||++....... + .....+.+|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999998 67799999999986542100 0 01234678999999995
Q ss_pred CC--CCeeEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh
Q 008127 155 GH--ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL 232 (577)
Q Consensus 155 ~h--pniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~ 232 (577)
+ ..+++++++ . ..++||||++|++|..... ....+....+..++.||+.+|.+||.
T Consensus 109 -~~~i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~~-----------------~~~~~~~~~~~~i~~qi~~~l~~LH~ 166 (237)
T smart00090 109 -EAGVPVPKPIAW---R-RNVLVMEFIGGDGLPAPRL-----------------KDVEPEEEEEFELYDDILEEMRKLYK 166 (237)
T ss_pred -hcCCCCCeeeEe---c-CceEEEEEecCCccccccc-----------------ccCCcchHHHHHHHHHHHHHHHHHHh
Confidence 4 334444442 2 3589999999988765321 12445666778999999999999999
Q ss_pred cC-ceeccCCCCcEEeecCCCCCCeeEEecCCCcccC
Q 008127 233 HG-LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268 (577)
Q Consensus 233 ~~-iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~ 268 (577)
.| |+||||||+||+++ ++.++|+|||.|....
T Consensus 167 ~g~iiH~Dikp~NIli~----~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 167 EGELVHGDLSEYNILVH----DGKVVIIDVSQSVELD 199 (237)
T ss_pred cCCEEeCCCChhhEEEE----CCCEEEEEChhhhccC
Confidence 99 99999999999997 4679999999987543
No 428
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.81 E-value=2e-21 Score=209.26 Aligned_cols=260 Identities=28% Similarity=0.489 Sum_probs=208.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcC-CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKA-NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~-~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
..|.+.+.||+|+|+.|-.+.... +...+|+|.+.... ...........|..+-..+..|+|++.+++........++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 358888999999999998887643 34467777665442 1233455566788887777669999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCC-CCCHHHHHHHHHHHHHHHHHHH-hcCceeccCCCCcEEeecCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS-RYTEKDAAVVVRQMLRVAAECH-LHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~i~~qil~~l~~LH-~~~iiHrDlKp~NILl~~~~~ 252 (577)
+++|..|+++.+.+. .... ..+...+..++.|+..++.|+| ..++.||||||+|.+++.
T Consensus 99 ~~~~s~g~~~f~~i~----------------~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~--- 159 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKIS----------------HPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDE--- 159 (601)
T ss_pred ccCcccccccccccc----------------cCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhcc---
Confidence 999999999987541 1122 5777888999999999999999 999999999999999984
Q ss_pred CC-CeeEEecCCCcccCC-CC---Ccccccc-CCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChh-HH
Q 008127 253 DS-SLKATDFGLSDFIKP-GK---KFQDIVG-SAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTED-GI 323 (577)
Q Consensus 253 ~~-~vkl~DFGla~~~~~-~~---~~~~~~g-t~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~-~~ 323 (577)
.+ .+++.|||+|..... .. .....+| ++.|+|||.+.+. ..+..|+||+|+++.-+++|..|+...... ..
T Consensus 160 s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~ 239 (601)
T KOG0590|consen 160 SGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR 239 (601)
T ss_pred CCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccc
Confidence 55 899999999987654 22 2345688 9999999988773 378899999999999999999998654332 23
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
+.........+...+|..++....+++.+++..+|..|.+.+++-.+||+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 240 YSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred ceeecccccccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 3333443344456678889999999999999999999999999999999988
No 429
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.79 E-value=7.6e-19 Score=180.71 Aligned_cols=199 Identities=25% Similarity=0.337 Sum_probs=154.5
Q ss_pred HHhcCCCCeeEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Q 008127 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAEC 230 (577)
Q Consensus 151 ~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~L 230 (577)
+.+ .|.|+.++++.+.++...++|.+||+.|+|.|.+... ...+..--...++++|+.||.||
T Consensus 2 ~~l-~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~----------------~~~~d~~F~~s~~rdi~~Gl~yl 64 (484)
T KOG1023|consen 2 RQL-DHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE----------------DIKLDYFFILSFIRDISKGLAYL 64 (484)
T ss_pred ccc-chhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc----------------ccCccHHHHHHHHHHHHHHHHHH
Confidence 456 4999999999999999999999999999999987542 34566666778899999999999
Q ss_pred HhcCc-eeccCCCCcEEeecCCCCCCeeEEecCCCcccCCC---CCccccccCCccccchhcccC--------CCCCCch
Q 008127 231 HLHGL-VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKRK--------SGPESDV 298 (577)
Q Consensus 231 H~~~i-iHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~---~~~~~~~gt~~y~aPE~~~~~--------~~~~~Di 298 (577)
|.-.| .|+.|++.|.+++ ....+||+|||+....... .......-...|.|||.+.+. .+.+.||
T Consensus 65 h~s~i~~hg~l~s~nClvd---~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdi 141 (484)
T KOG1023|consen 65 HNSPIGYHGALKSSNCLVD---SRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDI 141 (484)
T ss_pred hcCcceeeeeeccccceee---eeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCe
Confidence 99766 9999999999999 4889999999998776421 111222344569999998753 3567999
Q ss_pred hhHHHHHHHHHhCCCCCCCC----ChhHHHHHHHhCCCCCCCCCCC---CCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 299 WSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWP---SISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 299 wSlG~il~el~tg~~Pf~~~----~~~~~~~~i~~~~~~~~~~~~~---~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
||+|++++|+++...||... ...++...+..+.....++... .+++++..++..||..+|..||+++++-.
T Consensus 142 Ys~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 142 YSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred ehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 99999999999999999652 2235555555522222222211 35567999999999999999999998754
No 430
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.78 E-value=1e-19 Score=183.32 Aligned_cols=178 Identities=24% Similarity=0.411 Sum_probs=134.1
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
.++||.|++|.-.+|.+.|.... .....+....+.++.|+..|++| ++.+|||+||.||.+.
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~--------------~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~- 390 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRR--------------TGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFS- 390 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCC--------------cccccchhHHHHHHHhhccchhh---ccchhhhccccccccc-
Confidence 46899999999999998775331 22445677788999999999999 9999999999999997
Q ss_pred CCCCCCeeEEecCCCcccCCCC-------CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCCh
Q 008127 250 AKEDSSLKATDFGLSDFIKPGK-------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTE 320 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~ 320 (577)
.+..+||.|||+........ .....+||++||+||.+.+ .|+.++||||||+||+||++ =..+|...
T Consensus 391 --~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~-- 466 (516)
T KOG1033|consen 391 --DDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI-- 466 (516)
T ss_pred --cchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH--
Confidence 46689999999987665443 4567799999999998875 67999999999999999998 33333111
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
..+..+-.+ .++...+.+. +.-..|+..||...|.+||++.+.--|+|.
T Consensus 467 -~t~~d~r~g--~ip~~~~~d~-p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 467 -ATLTDIRDG--IIPPEFLQDY-PEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred -HhhhhhhcC--CCChHHhhcC-cHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 112222222 2222222233 345689999999999999988877777774
No 431
>PTZ00183 centrin; Provisional
Probab=99.78 E-value=1.5e-18 Score=157.18 Aligned_cols=142 Identities=27% Similarity=0.499 Sum_probs=122.6
Q ss_pred ccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhc
Q 008127 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 489 (577)
Q Consensus 410 ~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~ 489 (577)
...++++++++++.+|..+|.+++|.|+..||..+|. .+|..++...+..++..+|.+++|.|+|+||+.++.....
T Consensus 8 ~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~-~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~-- 84 (158)
T PTZ00183 8 RPGLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMR-SLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLG-- 84 (158)
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhc--
Confidence 3457888999999999999999999999999999995 5788888899999999999999999999999987654221
Q ss_pred ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 490 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 490 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
.... ...++.+|+.+|+|++|+|+.+||..++...+ ++..+|..+|.|++|.|+|+||+.+|++.
T Consensus 85 ~~~~---~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 155 (158)
T PTZ00183 85 ERDP---REEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMKKT 155 (158)
T ss_pred CCCc---HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhcc
Confidence 1111 24678899999999999999999999887655 48999999999999999999999999863
No 432
>PTZ00184 calmodulin; Provisional
Probab=99.78 E-value=1.5e-18 Score=155.34 Aligned_cols=141 Identities=29% Similarity=0.554 Sum_probs=120.7
Q ss_pred ccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhc
Q 008127 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 489 (577)
Q Consensus 410 ~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~ 489 (577)
...++++++++++..|..+|.+++|.|+.+||..++. .++..+..+.+..+++.+|.+++|.|+|+||+.++.......
T Consensus 2 ~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~-~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~ 80 (149)
T PTZ00184 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDT 80 (149)
T ss_pred CCccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHH-HhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCC
Confidence 3457788899999999999999999999999999995 478888889999999999999999999999998765432111
Q ss_pred ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 490 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 490 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
. ....+..+|+.+|.|++|+|+.+||+.++...+ ++..++..+|.+++|.|+|+||+.+|..
T Consensus 81 --~---~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 148 (149)
T PTZ00184 81 --D---SEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMS 148 (149)
T ss_pred --c---HHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHhc
Confidence 1 123577899999999999999999999886554 4888999999999999999999998863
No 433
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.77 E-value=5.5e-18 Score=161.28 Aligned_cols=137 Identities=26% Similarity=0.365 Sum_probs=111.1
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCch-----hhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP-----IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~-----~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+.||+|++|.||+|.+ +|..|++|.........+ .....+.+|+.++..+. |++|+....++...+..++||
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRAR-KAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCeEEEEeCCCCEEEE
Confidence 5799999999999975 778899997654332111 12345788999999995 888877777777777889999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++|++|.+.+... .. ....++.+++.+|.++|..|++|||++|.|||++ ++.+
T Consensus 79 e~~~G~~L~~~~~~~--------------------~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~----~~~~ 133 (211)
T PRK14879 79 EYIEGEPLKDLINSN--------------------GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS----GGKI 133 (211)
T ss_pred EEeCCcCHHHHHHhc--------------------cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE----CCCE
Confidence 999999998765321 11 6788999999999999999999999999999997 5679
Q ss_pred eEEecCCCcc
Q 008127 257 KATDFGLSDF 266 (577)
Q Consensus 257 kl~DFGla~~ 266 (577)
+|+|||++..
T Consensus 134 ~liDf~~a~~ 143 (211)
T PRK14879 134 YLIDFGLAEF 143 (211)
T ss_pred EEEECCcccC
Confidence 9999999875
No 434
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.76 E-value=6.1e-18 Score=159.17 Aligned_cols=139 Identities=24% Similarity=0.318 Sum_probs=106.0
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCch-------------------hhHHHHHHHHHHHHHhcCCC-
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP-------------------IAVEDVKREVKILQALAGHE- 157 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~-------------------~~~~~~~~E~~~l~~l~~hp- 157 (577)
|.+.+.||.|+||.||+|.+. +|+.||||++........ .......+|+.++..+. |+
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~ 94 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALY-EEG 94 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHH-HcC
Confidence 778899999999999999864 899999998765321000 11223678899999984 66
Q ss_pred -CeeEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCce
Q 008127 158 -NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 236 (577)
Q Consensus 158 -niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~ii 236 (577)
.++..++ ....++||||++|++|..... ......++.+++.++.++|..||+
T Consensus 95 i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~-----------------------~~~~~~~~~~i~~~l~~lh~~gi~ 147 (198)
T cd05144 95 FPVPKPID----WNRHAVVMEYIDGVELYRVRV-----------------------LEDPEEVLDEILEEIVKAYKHGII 147 (198)
T ss_pred CCCCceee----cCCceEEEEEeCCcchhhccc-----------------------cccHHHHHHHHHHHHHHHHHCCCC
Confidence 3444443 234589999999988754210 134567889999999999999999
Q ss_pred eccCCCCcEEeecCCCCCCeeEEecCCCcccC
Q 008127 237 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268 (577)
Q Consensus 237 HrDlKp~NILl~~~~~~~~vkl~DFGla~~~~ 268 (577)
||||||+||+++ +++.++|+|||++....
T Consensus 148 H~Dl~p~Nill~---~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 148 HGDLSEFNILVD---DDEKIYIIDWPQMVSTD 176 (198)
T ss_pred cCCCCcccEEEc---CCCcEEEEECCccccCC
Confidence 999999999998 47899999999996544
No 435
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.75 E-value=1.1e-17 Score=157.52 Aligned_cols=134 Identities=25% Similarity=0.333 Sum_probs=104.6
Q ss_pred eecccCCeEEEEEEEcCCCCEEEEEEecccccCc-----hhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL-----PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 103 ~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~-----~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
.||+|+||.||+|. .+|..|++|......... ......+.+|++++..+. |+++.....++...+..++|||
T Consensus 1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRAR-KAGVNTPVVYDVDPDNKTIVME 77 (199)
T ss_pred CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHH-HCCCCCCEEEEEECCCCEEEEE
Confidence 48999999999997 467899999865432211 112466788999999995 7765544444555666789999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
|++|++|.+.+... . ..++.+++.+|.+||+.|++|||++|.||+++ ++.++
T Consensus 78 ~~~g~~l~~~~~~~-----------------~-------~~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~----~~~~~ 129 (199)
T TIGR03724 78 YIEGKPLKDVIEEG-----------------N-------DELLREIGRLVGKLHKAGIVHGDLTTSNIIVR----DDKLY 129 (199)
T ss_pred EECCccHHHHHhhc-----------------H-------HHHHHHHHHHHHHHHHCCeecCCCCcceEEEE----CCcEE
Confidence 99999998755321 0 06889999999999999999999999999997 57799
Q ss_pred EEecCCCccc
Q 008127 258 ATDFGLSDFI 267 (577)
Q Consensus 258 l~DFGla~~~ 267 (577)
++|||++...
T Consensus 130 liDfg~a~~~ 139 (199)
T TIGR03724 130 LIDFGLGKYS 139 (199)
T ss_pred EEECCCCcCC
Confidence 9999998764
No 436
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.75 E-value=1.1e-17 Score=140.22 Aligned_cols=135 Identities=24% Similarity=0.428 Sum_probs=120.1
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
..|.+.++.+++++|..+|.|+||.|++++|+..|. .+|..+++++++.|+++ +.|.|+|.-|+.++-.. +..
T Consensus 24 amf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~a-SlGk~~~d~elDaM~~E----a~gPINft~FLTmfGek--L~g 96 (171)
T KOG0031|consen 24 AMFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLA-SLGKIASDEELDAMMKE----APGPINFTVFLTMFGEK--LNG 96 (171)
T ss_pred HHhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHH-HcCCCCCHHHHHHHHHh----CCCCeeHHHHHHHHHHH--hcC
Confidence 457889999999999999999999999999999995 59999999999999986 68899999999877543 222
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
.+. ...+..||+.||.+++|.|..+.|+++|...| +++.+++.+-.|..|.|+|.+|+.++.
T Consensus 97 tdp---e~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 97 TDP---EEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDYKAFTYIIT 164 (171)
T ss_pred CCH---HHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeHHHHHHHHH
Confidence 222 24678899999999999999999999999988 599999999999999999999999997
No 437
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.74 E-value=2e-17 Score=179.09 Aligned_cols=142 Identities=24% Similarity=0.305 Sum_probs=111.2
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccC-----chhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI-----LPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~-----~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 168 (577)
....|...+.||+|+||.||+|.+. +..+++|+....... .....+.+.+|++++..+. |++++....++..
T Consensus 331 ~~~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~ 407 (535)
T PRK09605 331 VKRRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEAR-RAGVPTPVIYDVD 407 (535)
T ss_pred cccccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhc-ccCCCeeEEEEEe
Confidence 3445667889999999999999754 344555543221111 1123456889999999995 9999888777777
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
....++||||++|++|.+.+. ....++.+++.+|.+||+.||+||||||+|||++
T Consensus 408 ~~~~~lv~E~~~g~~L~~~l~-------------------------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~ 462 (535)
T PRK09605 408 PEEKTIVMEYIGGKDLKDVLE-------------------------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR 462 (535)
T ss_pred CCCCEEEEEecCCCcHHHHHH-------------------------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE
Confidence 777899999999999987652 2356889999999999999999999999999994
Q ss_pred cCCCCCCeeEEecCCCccc
Q 008127 249 SAKEDSSLKATDFGLSDFI 267 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~ 267 (577)
++.++|+|||+++..
T Consensus 463 ----~~~~~liDFGla~~~ 477 (535)
T PRK09605 463 ----DDRLYLIDFGLGKYS 477 (535)
T ss_pred ----CCcEEEEeCcccccC
Confidence 568999999999764
No 438
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.72 E-value=4.1e-17 Score=152.12 Aligned_cols=141 Identities=25% Similarity=0.278 Sum_probs=100.1
Q ss_pred eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHH---------------------HHHHHHHHHHHhcCC-CC
Q 008127 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------------------DVKREVKILQALAGH-EN 158 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~---------------------~~~~E~~~l~~l~~h-pn 158 (577)
.+.||+|+||.||+|.+. +|+.||||++............ ....|...+..+..+ ..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 567999999999999976 8999999988654321111111 114566677776422 22
Q ss_pred eeEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCcee
Q 008127 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVH 237 (577)
Q Consensus 159 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiH 237 (577)
+.+.++. ...++||||++|+.+....... ... ...+..++.+++.++.++|. .+|+|
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~-----------------~~~-~~~~~~~~~~~~~~l~~lh~~~~ivH 138 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKD-----------------VRL-LEDPEELYDQILELMRKLYREAGLVH 138 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhh-----------------hhh-cccHHHHHHHHHHHHHHHhhccCcCc
Confidence 4444443 2358999999996654322111 000 15678899999999999999 99999
Q ss_pred ccCCCCcEEeecCCCCCCeeEEecCCCcccC
Q 008127 238 RDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268 (577)
Q Consensus 238 rDlKp~NILl~~~~~~~~vkl~DFGla~~~~ 268 (577)
|||||+||+++ ++.++|+|||.+....
T Consensus 139 ~Dl~p~Nili~----~~~~~liDfg~a~~~~ 165 (187)
T cd05119 139 GDLSEYNILVD----DGKVYIIDVPQAVEID 165 (187)
T ss_pred CCCChhhEEEE----CCcEEEEECccccccc
Confidence 99999999997 5789999999997554
No 439
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.72 E-value=2.3e-17 Score=135.94 Aligned_cols=139 Identities=21% Similarity=0.324 Sum_probs=118.9
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCC--CCcceehhhHHHHHhhhhhhc
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN--TDGLVDFSEFVAATLHVHQLE 489 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d--~dg~i~f~EF~~~~~~~~~~~ 489 (577)
.+++++..+++++|..||..+||+|+..++..+| +++|.+|++.++.+....++.+ +-..|+|++|+.++.......
T Consensus 4 ~~~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvl-RalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk 82 (152)
T KOG0030|consen 4 AFTPDQMEEFKEAFLLFDRTGDGKISGSQVGDVL-RALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNK 82 (152)
T ss_pred ccCcchHHHHHHHHHHHhccCcccccHHHHHHHH-HHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhcc
Confidence 3566788999999999999999999999999999 7899999999999999998877 457899999999887655443
Q ss_pred ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 490 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 490 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
..... +...+-++.||++++|.|...||+.+|.++| +++.++... .|.+|.|.|++|++.+.
T Consensus 83 ~q~t~---edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Llag~-eD~nG~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 83 DQGTY---EDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLAGQ-EDSNGCINYEAFVKHIM 150 (152)
T ss_pred ccCcH---HHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHccc-cccCCcCcHHHHHHHHh
Confidence 33332 3566789999999999999999999999998 478888765 47899999999998764
No 440
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=99.70 E-value=7.4e-17 Score=145.93 Aligned_cols=137 Identities=29% Similarity=0.474 Sum_probs=114.7
Q ss_pred cccchHHHhhhccccccccCC-CCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcc-eehhhHHHHHhhhhhh
Q 008127 411 STLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL-VDFSEFVAATLHVHQL 488 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d-~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~-i~f~EF~~~~~~~~~~ 488 (577)
+.++..++..|..+|.++|.+ ++|+|+.+||..+.. +.. +...++++..+|.+++|. |+|++|+..+......
T Consensus 25 ~~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~--~~~---Np~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~ 99 (187)
T KOG0034|consen 25 TQFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIPE--LAL---NPLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPK 99 (187)
T ss_pred cccCHHHHHHHHHHHHHhccccccCccCHHHHHHHHH--Hhc---CcHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCC
Confidence 458899999999999999999 999999999999873 222 346778999999999988 9999999987654332
Q ss_pred cccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC-------------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 489 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 489 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-------------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
.. . ..+++-||++||.+++|+|+.+|+..++..+- -++.+|.++|.|+||+|+|+||++++.
T Consensus 100 ~~---~--~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~ 174 (187)
T KOG0034|consen 100 AS---K--REKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVE 174 (187)
T ss_pred cc---H--HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 22 1 24788999999999999999999998775432 167899999999999999999999998
Q ss_pred hc
Q 008127 556 TA 557 (577)
Q Consensus 556 ~~ 557 (577)
+.
T Consensus 175 ~~ 176 (187)
T KOG0034|consen 175 KQ 176 (187)
T ss_pred cC
Confidence 75
No 441
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.67 E-value=3.5e-17 Score=168.47 Aligned_cols=259 Identities=26% Similarity=0.318 Sum_probs=198.9
Q ss_pred ccccceeeeeeecc--cCCeEEEEEEE--cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc
Q 008127 93 DFDRRYTIGKLLGH--GQFGYTYVATD--KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (577)
Q Consensus 93 ~~~~~y~~~~~lG~--G~fg~V~~~~~--~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 168 (577)
.+...+.+...+|. |.+|.||.+.. ..++..+|+|.-... ...+.....-.+|+.....+..|++.++.+..++.
T Consensus 111 ~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p-~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~ 189 (524)
T KOG0601|consen 111 FFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIP-FSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG 189 (524)
T ss_pred hhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCC-CCCccccccccchhhcccccCccccccccCccccc
Confidence 35567888999999 99999999998 889999999973211 11122333345677777777789999999999999
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHH----HHHHHHhcCceeccCCCCc
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLR----VAAECHLHGLVHRDMKPEN 244 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~----~l~~LH~~~iiHrDlKp~N 244 (577)
.+..|+-+|+| +.+|..+... ....++...++.++.+... ||.++|+.+++|-|+||+|
T Consensus 190 ~~~lfiqtE~~-~~sl~~~~~~----------------~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~ 252 (524)
T KOG0601|consen 190 SGILFIQTELC-GESLQSYCHT----------------PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPAN 252 (524)
T ss_pred CCcceeeeccc-cchhHHhhhc----------------ccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhh
Confidence 99999999999 5677664432 2355788889999999999 9999999999999999999
Q ss_pred EEeecCCCC-CCeeEEecCCCcccCCCCCc------cccccCCccccchhcccCCCCCCchhhHHHHHHHHHhCCCCCCC
Q 008127 245 FLFKSAKED-SSLKATDFGLSDFIKPGKKF------QDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWD 317 (577)
Q Consensus 245 ILl~~~~~~-~~vkl~DFGla~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~ 317 (577)
|+... + ..++++|||+...+.+.... ....|...|++||++.+-++...||+|+|.++.+-.++..++..
T Consensus 253 i~~~~---~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~ 329 (524)
T KOG0601|consen 253 IFTTS---DWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSV 329 (524)
T ss_pred eeccc---ccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccC
Confidence 99984 4 78999999999877655421 22357888999999999999999999999999999998777643
Q ss_pred CChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 318 KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 318 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
.-...+.. + .... .+...+...+.++...+..|+..+|..|+++..++.|+++..
T Consensus 330 g~~~~W~~-~-r~~~-ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s 384 (524)
T KOG0601|consen 330 GKNSSWSQ-L-RQGY-IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS 384 (524)
T ss_pred CCCCCccc-c-cccc-CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence 31111110 0 0000 112222345667777999999999999999999999999874
No 442
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.67 E-value=1.5e-17 Score=179.06 Aligned_cols=260 Identities=24% Similarity=0.373 Sum_probs=202.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
+.+.+.+.+-.|++|.++.+.-..+|...++|.............+....+-.++-.. .+|-++...-.+......++|
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p-~~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITP-RSPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccC-CCCceecccCCCCCCCCcchh
Confidence 3577778999999999999987778877777766554433333344455554444323 367777665555667789999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
++|+.+++|...|... ...++..++.+...+..+++|||...++|||++|.|+|.. .+++
T Consensus 883 ~~~~~~~~~~Skl~~~-----------------~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~---~~gh 942 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLHNS-----------------GCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIA---YDGH 942 (1205)
T ss_pred hHHhccCCchhhhhcC-----------------CCcccccccchhHHHHhhhhccccchhhcccccccchhhc---ccCC
Confidence 9999999998766432 4567777888899999999999999999999999999987 5899
Q ss_pred eeEEecCCCcccC------CC--------------------------CCccccccCCccccchhcccC-CCCCCchhhHH
Q 008127 256 LKATDFGLSDFIK------PG--------------------------KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIG 302 (577)
Q Consensus 256 vkl~DFGla~~~~------~~--------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG 302 (577)
.+++|||...... .. .......||+.|.+||.+.+. .+..+|+|++|
T Consensus 943 ~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g 1022 (1205)
T KOG0606|consen 943 RPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSG 1022 (1205)
T ss_pred cccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhh
Confidence 9999998432210 00 011235799999999987654 58899999999
Q ss_pred HHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHH---HHhcCccccccC
Q 008127 303 VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA---QALSHPWVREGG 377 (577)
Q Consensus 303 ~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~---~il~hp~f~~~~ 377 (577)
+++++.++|.+||...+.+.++++++.....++.-+ ...+.++++++.++|..+|.+|..+. ++-.||||+...
T Consensus 1023 ~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~-~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~ 1099 (1205)
T KOG0606|consen 1023 VCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGP-EEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVD 1099 (1205)
T ss_pred hhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCc-cccChhhhhhhhhhhccCchhccCcccccccccCCccCCCC
Confidence 999999999999999999999999988766544332 34678899999999999999999988 889999999764
No 443
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.66 E-value=1.2e-15 Score=147.04 Aligned_cols=139 Identities=17% Similarity=0.264 Sum_probs=101.8
Q ss_pred eeeec-ccCCeEEEEEEEcCCCCEEEEEEeccccc----------CchhhHHHHHHHHHHHHHhcCCCCe--eEEEEEEE
Q 008127 101 GKLLG-HGQFGYTYVATDKANGDRVAVKKIEKNKM----------ILPIAVEDVKREVKILQALAGHENV--VKFYNAFE 167 (577)
Q Consensus 101 ~~~lG-~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----------~~~~~~~~~~~E~~~l~~l~~hpni--v~~~~~~~ 167 (577)
...|| .|+.|+||.+.. .+..+|||.+..... ........+.+|+.++..|. |++| +..+++..
T Consensus 36 ~~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~-~~gi~vP~pl~~~~ 112 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLY-EAGLPVPRPIAARV 112 (239)
T ss_pred CceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHH-hCCCCCceeEeeee
Confidence 34687 889999999864 477899998754221 01123456788999999995 7775 66666543
Q ss_pred c-CCe---EEEEEeccCC-CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCC
Q 008127 168 D-DNY---VYIAMELCEG-GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP 242 (577)
Q Consensus 168 ~-~~~---~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp 242 (577)
. .+. .++|||+++| .+|.+.+. ...+++. .+.+|+.+|.+||++||+||||||
T Consensus 113 ~~~~~~~~~~lV~e~l~G~~~L~~~l~------------------~~~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp 170 (239)
T PRK01723 113 VRHGLFYRADILIERIEGARDLVALLQ------------------EAPLSEE----QWQAIGQLIARFHDAGVYHADLNA 170 (239)
T ss_pred eecCcceeeeEEEEecCCCCCHHHHHh------------------cCCCCHH----HHHHHHHHHHHHHHCCCCCCCCCc
Confidence 3 222 3599999997 57766542 1334443 357899999999999999999999
Q ss_pred CcEEeecCCCCCCeeEEecCCCccc
Q 008127 243 ENFLFKSAKEDSSLKATDFGLSDFI 267 (577)
Q Consensus 243 ~NILl~~~~~~~~vkl~DFGla~~~ 267 (577)
+|||++. ++.++|+|||.+...
T Consensus 171 ~NILv~~---~~~v~LIDfg~~~~~ 192 (239)
T PRK01723 171 HNILLDP---DGKFWLIDFDRGELR 192 (239)
T ss_pred hhEEEcC---CCCEEEEECCCcccC
Confidence 9999984 568999999998764
No 444
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.66 E-value=1.1e-15 Score=136.85 Aligned_cols=134 Identities=28% Similarity=0.343 Sum_probs=110.1
Q ss_pred eeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCC-CCeeEEEEEEEcCCeEEEEEec
Q 008127 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH-ENVVKFYNAFEDDNYVYIAMEL 178 (577)
Q Consensus 100 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~h-pniv~~~~~~~~~~~~~lv~e~ 178 (577)
+++.||.|.++.||++... +..+++|.+..... ...+.+|+.+++.+.++ +++++++.++...+..+++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 4577999999999999864 37899998755431 45688999999999744 6899999988888889999999
Q ss_pred cCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc---CceeccCCCCcEEeecCCCCCC
Q 008127 179 CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH---GLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 179 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~---~iiHrDlKp~NILl~~~~~~~~ 255 (577)
++|+.+.. ++......++.+++.+|.++|.. +++|+||+|+||+++. .+.
T Consensus 75 ~~g~~~~~------------------------~~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~---~~~ 127 (155)
T cd05120 75 IEGETLDE------------------------VSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD---GKI 127 (155)
T ss_pred cCCeeccc------------------------CCHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC---CcE
Confidence 98877643 14455667889999999999985 7999999999999983 678
Q ss_pred eeEEecCCCccc
Q 008127 256 LKATDFGLSDFI 267 (577)
Q Consensus 256 vkl~DFGla~~~ 267 (577)
++++|||.+...
T Consensus 128 ~~l~Df~~~~~~ 139 (155)
T cd05120 128 LGIIDWEYAGYG 139 (155)
T ss_pred EEEEecccccCC
Confidence 999999998754
No 445
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.65 E-value=6.4e-16 Score=139.74 Aligned_cols=139 Identities=27% Similarity=0.409 Sum_probs=114.8
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
+.|+..++..+.+-|.. ....|.++.++|+.+++..++..-+...++.+|+.+|.|+||.|+|.||+.++........
T Consensus 21 t~f~~~ei~~~Yr~Fk~--~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~ 98 (193)
T KOG0044|consen 21 TKFSKKEIQQWYRGFKN--ECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTL 98 (193)
T ss_pred cCCCHHHHHHHHHHhcc--cCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcH
Confidence 56778888888888876 5679999999999999887777777888999999999999999999999987765433222
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc----C-------------cHHHHHHHhCCCCCCcccHHHHHHH
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G-------------SIDPLLEEADIDKDGRISLSEFRRL 553 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~-------------~~~~~~~~~D~d~dG~i~~~EF~~~ 553 (577)
.++++-+|++||.||+|+|+.+|+-.++... + -++.+|+.+|.|+||.|+++||+..
T Consensus 99 ------eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~ 172 (193)
T KOG0044|consen 99 ------EEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEG 172 (193)
T ss_pred ------HHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHH
Confidence 2356678999999999999999998765432 1 1788999999999999999999998
Q ss_pred Hhhc
Q 008127 554 LRTA 557 (577)
Q Consensus 554 l~~~ 557 (577)
....
T Consensus 173 ~~~d 176 (193)
T KOG0044|consen 173 CKAD 176 (193)
T ss_pred hhhC
Confidence 8754
No 446
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.61 E-value=2.8e-15 Score=134.30 Aligned_cols=126 Identities=25% Similarity=0.361 Sum_probs=111.3
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~ 498 (577)
..+...|...|+|+.|.|+.+||..+|...-...++.+.+..|+..+|.+.+|+|+|.||..+|..+.
T Consensus 57 ~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~------------ 124 (221)
T KOG0037|consen 57 PQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYIN------------ 124 (221)
T ss_pred HHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHH------------
Confidence 46788899999999999999999999964445678889999999999999999999999998886543
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcCcCc------HHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~------~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
..+.+|+.||+|++|.|+..||+.+|..+|- .+-+++.+|.-++|.|.|++|+..+-.
T Consensus 125 ~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~ 188 (221)
T KOG0037|consen 125 QWRNVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVV 188 (221)
T ss_pred HHHHHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHH
Confidence 4566999999999999999999999999992 788899999888999999999987754
No 447
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.49 E-value=5.8e-14 Score=133.22 Aligned_cols=135 Identities=30% Similarity=0.413 Sum_probs=108.0
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~ 498 (577)
.+-++.|+.-|.|+||.++.+||..+|+..-...+.+.-|..-+..+|+|+||+|+++||+.-+..... +.+.++|..
T Consensus 163 ~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~--~~~epeWv~ 240 (325)
T KOG4223|consen 163 ARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEG--NEEEPEWVL 240 (325)
T ss_pred HHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccC--CCCCccccc
Confidence 445667999999999999999999999654344556677888899999999999999999987765433 233445543
Q ss_pred HHH-HHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 499 RSQ-AAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 499 ~~~-~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
.-+ ..|...|+|+||+++.+|++.++...+ ++..++-+.|.|+||++|++|.+.-.-
T Consensus 241 ~Ere~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A~~EA~hL~~eaD~dkD~kLs~eEIl~~~d 304 (325)
T KOG4223|consen 241 TEREQFFEFRDKNKDGKLDGDELLDWILPSEQDHAKAEARHLLHEADEDKDGKLSKEEILEHYD 304 (325)
T ss_pred ccHHHHHHHhhcCCCCccCHHHHhcccCCCCccHHHHHHHHHhhhhccCccccccHHHHhhCcc
Confidence 333 456677999999999999998887665 588899999999999999999886543
No 448
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=99.46 E-value=1.8e-13 Score=133.13 Aligned_cols=133 Identities=29% Similarity=0.427 Sum_probs=113.9
Q ss_pred chHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCC-CccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccc
Q 008127 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 492 (577)
Q Consensus 414 ~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~ 492 (577)
.++...+++.+|+.||.+++|.++..++.+.+.. ++. ++...-+..+|+.+|.|.||.+||.||...+. +.
T Consensus 9 ~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~-l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~------~~- 80 (463)
T KOG0036|consen 9 DEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEK-LDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLD------NK- 80 (463)
T ss_pred cHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHh-cCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHH------Hh-
Confidence 4455568999999999999999999999999865 544 47777889999999999999999999986442 22
Q ss_pred cHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 493 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 493 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
+.++..+|+.+|.++||.|+.+|+...+..+| ++..+|+.+|.++++.|+++||.+.+.-..
T Consensus 81 ----E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll~p 148 (463)
T KOG0036|consen 81 ----ELELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLLYP 148 (463)
T ss_pred ----HHHHHHHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhhcCC
Confidence 23677899999999999999999999998887 378899999999999999999999886544
No 449
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.46 E-value=5.1e-13 Score=140.01 Aligned_cols=144 Identities=20% Similarity=0.270 Sum_probs=94.6
Q ss_pred eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCc---------------------------hhh----HH------HH
Q 008127 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL---------------------------PIA----VE------DV 143 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~---------------------------~~~----~~------~~ 143 (577)
.+.||.|++|+||+|+. .+|+.||||+....-... ... .. .+
T Consensus 122 ~~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 35799999999999985 489999999875431000 000 00 23
Q ss_pred HHHHHHHHHhc----CCCCeeEEEEEE-EcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHH
Q 008127 144 KREVKILQALA----GHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218 (577)
Q Consensus 144 ~~E~~~l~~l~----~hpniv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 218 (577)
.+|...+.++. ++|++. +-.+| ...+..+|||||++|++|.+..... . .... ...
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~-vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~---------------~-~~~~---~~~ 260 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVY-VPEVYWDRTSERVLTMEWIDGIPLSDIAALD---------------E-AGLD---RKA 260 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEE-eCCEehhhcCCceEEEEeECCcccccHHHHH---------------h-cCCC---HHH
Confidence 44555454443 344432 22222 2344578999999999998754321 0 1111 234
Q ss_pred HHHHHHH-HHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccC
Q 008127 219 VVRQMLR-VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268 (577)
Q Consensus 219 i~~qil~-~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~ 268 (577)
++..++. .+..+|..|++|+|++|.||+++ .++.++|+|||++..+.
T Consensus 261 ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~---~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 261 LAENLARSFLNQVLRDGFFHADLHPGNIFVL---KDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHHHHHHHHHHHhCCceeCCCCcccEEEC---CCCcEEEEeCCCeeECC
Confidence 5555555 46788999999999999999997 46889999999987653
No 450
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.44 E-value=1.7e-12 Score=119.57 Aligned_cols=141 Identities=15% Similarity=0.117 Sum_probs=100.3
Q ss_pred eeecccCCeEEEEEEEcC------CCCEEEEEEeccccc-------------------CchhhHHH----HHHHHHHHHH
Q 008127 102 KLLGHGQFGYTYVATDKA------NGDRVAVKKIEKNKM-------------------ILPIAVED----VKREVKILQA 152 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~------~~~~vaiK~i~~~~~-------------------~~~~~~~~----~~~E~~~l~~ 152 (577)
..||.|.-+.||.|.... .+..+|||+...... ........ ..+|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999997543 357999997632100 00111222 3489999999
Q ss_pred hcCC-CCeeEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH-
Q 008127 153 LAGH-ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAEC- 230 (577)
Q Consensus 153 l~~h-pniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~L- 230 (577)
+... -++++.+++ ..-+|||||+.++.+..... +...+++..+..++.+++.+|..|
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~L-----------------kd~~~~~~~~~~i~~~i~~~l~~l~ 141 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKL-----------------KDAKLNDEEMKNAYYQVLSMMKQLY 141 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhh-----------------hccccCHHHHHHHHHHHHHHHHHHH
Confidence 8633 466666654 34689999997654422111 123455666778889999999999
Q ss_pred HhcCceeccCCCCcEEeecCCCCCCeeEEecCCCccc
Q 008127 231 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267 (577)
Q Consensus 231 H~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~ 267 (577)
|..||||+||+|.|||+. ++.+.|+|||.|...
T Consensus 142 H~~glVHGDLs~~NIL~~----~~~v~iIDF~qav~~ 174 (197)
T cd05146 142 KECNLVHADLSEYNMLWH----DGKVWFIDVSQSVEP 174 (197)
T ss_pred HhCCeecCCCCHHHEEEE----CCcEEEEECCCceeC
Confidence 899999999999999997 467999999988654
No 451
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.43 E-value=3.6e-13 Score=127.84 Aligned_cols=140 Identities=27% Similarity=0.356 Sum_probs=110.0
Q ss_pred HHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhh-------
Q 008127 416 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL------- 488 (577)
Q Consensus 416 ~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~------- 488 (577)
+...++..+|..+|.++||.|+..||..++.... ......++.+-+..+|.|+||.|+|+||...+......
T Consensus 74 e~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~-k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~ 152 (325)
T KOG4223|consen 74 ESQERLGKLVPKIDSDSDGFVTESELKAWIMQSQ-KKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDE 152 (325)
T ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHH-HHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccc
Confidence 4567899999999999999999999999986533 23334677778899999999999999999877642110
Q ss_pred cc-cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC-------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 489 EE-HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 489 ~~-~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
.. .........-++-|++-|.|+||.++.+||-.+|.... -|.+.+..+|+||||+|+++||+.-|..
T Consensus 153 e~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~ 228 (325)
T KOG4223|consen 153 EDNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYS 228 (325)
T ss_pred hhcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhh
Confidence 00 11111223446689999999999999999999997654 2889999999999999999999977754
No 452
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.42 E-value=1.3e-13 Score=145.95 Aligned_cols=151 Identities=21% Similarity=0.242 Sum_probs=95.3
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEeccccc--------------------------Cc-h----hhHHHH--
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM--------------------------IL-P----IAVEDV-- 143 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--------------------------~~-~----~~~~~~-- 143 (577)
.|.. +.||.|++|+||+|+.+.+|+.||||++...-. .. . ...+.+
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 4665 789999999999999887899999999865310 00 0 111223
Q ss_pred ----HHHHHHHHHhc---CCCCeeEEEEEEE-cCCeEEEEEeccCCCchhHHHH--HHhhhhhhhhhHHHhhhcCCCCCH
Q 008127 144 ----KREVKILQALA---GHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRIL--AKMISTTLTSAWFLAIRKDSRYTE 213 (577)
Q Consensus 144 ----~~E~~~l~~l~---~hpniv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~~~~~~~l~~ 213 (577)
.+|+..+.++. .+...+.+-.+|. .....+|||||+.|+.+.+.-. .... ....+.+
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~-------------d~~~la~ 266 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGT-------------DMKLLAE 266 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCC-------------CHHHHHH
Confidence 33443333332 1333343334333 2456789999999999976321 1100 0012444
Q ss_pred HHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC-CCCCeeEEecCCCcccC
Q 008127 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-EDSSLKATDFGLSDFIK 268 (577)
Q Consensus 214 ~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~-~~~~vkl~DFGla~~~~ 268 (577)
..+..++.|++ ..|++|+|+||.||+++..+ .++.++++|||++..+.
T Consensus 267 ~~v~~~~~Qif-------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 267 RGVEVFFTQVF-------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred HHHHHHHHHHH-------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 44555555654 58999999999999998421 12489999999987664
No 453
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.41 E-value=1.5e-12 Score=119.22 Aligned_cols=129 Identities=19% Similarity=0.207 Sum_probs=95.2
Q ss_pred eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
++.|+.|.++.||++.. .+..|++|....... ....+.+|+.+++.+.+...+++++.... ...++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecC
Confidence 45789999999999975 377899998754321 12346789999998863333455555443 23479999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCc-----eeccCCCCcEEeecCCCCCC
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGL-----VHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~i-----iHrDlKp~NILl~~~~~~~~ 255 (577)
|.++.+. ......++.+++.+|..||..++ +|+|++|.||+++ ++.
T Consensus 75 G~~l~~~-------------------------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~----~~~ 125 (170)
T cd05151 75 GSELLTE-------------------------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD----DGR 125 (170)
T ss_pred CCccccc-------------------------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE----CCe
Confidence 9877531 00113456799999999999885 9999999999997 356
Q ss_pred eeEEecCCCcc
Q 008127 256 LKATDFGLSDF 266 (577)
Q Consensus 256 vkl~DFGla~~ 266 (577)
++++|||.+..
T Consensus 126 ~~liDf~~a~~ 136 (170)
T cd05151 126 LWLIDWEYAGM 136 (170)
T ss_pred EEEEecccccC
Confidence 99999998864
No 454
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.41 E-value=1.7e-13 Score=141.42 Aligned_cols=251 Identities=18% Similarity=0.167 Sum_probs=182.1
Q ss_pred ccceeeeeeecccCCeEEEEEEEc-CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDK-ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
..+|..+..||.|.|+.|+.+..+ .++..|++|.+...... ......-..|+-+...+..|.+++.++..|......|
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~-~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLAT-FASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccc-hHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 346888999999999999998755 67889999987654322 2222333567777777767999999998888888888
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
|--|||.++++...+.- ...+.+...+.+..|++.++.++|+..++|+|+||+||++... .
T Consensus 343 ip~e~~~~~s~~l~~~~-----------------~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~--~ 403 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRSVT-----------------SQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISND--G 403 (524)
T ss_pred CchhhhcCcchhhhhHH-----------------HHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccc--h
Confidence 99999999987654421 1446778889999999999999999999999999999999842 2
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccc-cchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYV-APEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~-aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
+..++.|||.+..+.- ......++-++. .+|++... +..+.|++|||..+.+.++|...-+.... ...+..+
T Consensus 404 ~~~~~~~~~~~t~~~~--~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~---~~~i~~~ 478 (524)
T KOG0601|consen 404 FFSKLGDFGCWTRLAF--SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ---SLTIRSG 478 (524)
T ss_pred hhhhccccccccccce--ecccccccccccccchhhccccccccccccccccccccccccCcccCccccc---ceeeecc
Confidence 8899999998864211 111223334445 35555443 37899999999999999998665322211 1122222
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~ 374 (577)
.. ...+.....+..+.+.++..++..||.+.++..|+=|-
T Consensus 479 ~~----p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 479 DT----PNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred cc----cCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 11 11234457788999999999999999999988876553
No 455
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.40 E-value=7.1e-14 Score=132.90 Aligned_cols=240 Identities=17% Similarity=0.199 Sum_probs=154.1
Q ss_pred EEEEEEEcCCCCEEEEEEecccccCchhh-HHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC-----eEEEEEeccCCCch
Q 008127 111 YTYVATDKANGDRVAVKKIEKNKMILPIA-VEDVKREVKILQALAGHENVVKFYNAFEDDN-----YVYIAMELCEGGEL 184 (577)
Q Consensus 111 ~V~~~~~~~~~~~vaiK~i~~~~~~~~~~-~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-----~~~lv~e~~~~g~L 184 (577)
.||++.+...|..|+.-.+.......+.. -+....-..-|-++ .|.|||++..||.+.. ...++.||++.|++
T Consensus 81 ~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllql-vHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~ 159 (458)
T KOG1266|consen 81 DVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQL-VHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSL 159 (458)
T ss_pred HHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHH-HHHHHHHHHHhhcccccccccceEEEEecccchhH
Confidence 46667666677666544332211111111 11122223334456 4999999999987543 47889999999999
Q ss_pred hHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc--CceeccCCCCcEEeecCCCCCCeeEEecC
Q 008127 185 LDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFG 262 (577)
Q Consensus 185 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~--~iiHrDlKp~NILl~~~~~~~~vkl~DFG 262 (577)
..+|.+- ......+......+|+.||+.||.|||+. -|+|+++..+-|++. .++.||+.---
T Consensus 160 ~~fLkrt-------------~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq---~ngLIkig~~a 223 (458)
T KOG1266|consen 160 KQFLKRT-------------KKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQ---HNGLIKIGSVA 223 (458)
T ss_pred HHHHHHH-------------HHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeec---CCceEEecccC
Confidence 9988643 22346678888899999999999999997 599999999999998 47777764211
Q ss_pred CCcccCCC----C--CccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHhCCCCC-CCCChhHHHHHHHhCCCCC
Q 008127 263 LSDFIKPG----K--KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPF-WDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 263 la~~~~~~----~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~tg~~Pf-~~~~~~~~~~~i~~~~~~~ 334 (577)
.. ...+. . ....-.|-++|.|||.=. .+.+.++|||++|+...+|..+..-- .+.+.-+.-..+..-....
T Consensus 224 p~-s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~l 302 (458)
T KOG1266|consen 224 PD-STHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGL 302 (458)
T ss_pred cc-ccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeec
Confidence 11 11110 0 011224678899998632 33467899999999999999886642 2222111111111111000
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
. ...-++++.+||+..|..||++.+++.||..=+
T Consensus 303 e-------n~lqr~~i~kcl~~eP~~rp~ar~llfHpllfe 336 (458)
T KOG1266|consen 303 E-------NGLQRGSITKCLEGEPNGRPDARLLLFHPLLFE 336 (458)
T ss_pred c-------CccccCcCcccccCCCCCCcchhhhhcCceeee
Confidence 0 011246889999999999999999999998654
No 456
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.31 E-value=2.8e-11 Score=126.24 Aligned_cols=182 Identities=19% Similarity=0.258 Sum_probs=131.3
Q ss_pred eeeeeeecccCCeEEE-EEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 98 YTIGKLLGHGQFGYTY-VATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~-~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
|.+ ...+-++.+ || .|..+.++.+|.|..+..+.- ...+...+-+.-|+.|+ ||||+++++.++.++.+|||+
T Consensus 15 Y~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtlR-HP~Il~yL~t~e~~~~~ylvT 88 (690)
T KOG1243|consen 15 YDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTLR-HPNILSYLDTTEEEGTLYLVT 88 (690)
T ss_pred ccc-ccccCCCcc-cccccceeccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhcc-CchhhhhhhhhcccCceEEEe
Confidence 555 333444444 44 466678899999988765532 23455677788899996 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH-hcCceeccCCCCcEEeecCCCCCC
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH-LHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH-~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|-+. .|..++.. ++...+...+.||+.||.||| ..+++|++|..+.|+++ ..|.
T Consensus 89 ErV~--Pl~~~lk~--------------------l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn---~~Ge 143 (690)
T KOG1243|consen 89 ERVR--PLETVLKE--------------------LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVN---ESGE 143 (690)
T ss_pred eccc--cHHHHHHH--------------------hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEc---CCCc
Confidence 9884 44444432 346677888999999999998 57899999999999998 5889
Q ss_pred eeEEecCCCcccCCCCC-ccccccCCccccchhcccCCCCCCchhhHHHHHHHHHhC
Q 008127 256 LKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCG 311 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg 311 (577)
.||++|-++........ .....---.|..|+.+... .-..|.|-|||++++++.|
T Consensus 144 WkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s-~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 144 WKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPS-EWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred EEEeeeEEEeccccCCcccccchhhhcccChhhcCcc-ccchhhhhHHHHHHHHhCc
Confidence 99999988754432211 1111111235566543222 1346999999999999999
No 457
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.31 E-value=6.8e-11 Score=104.42 Aligned_cols=150 Identities=21% Similarity=0.272 Sum_probs=109.5
Q ss_pred eeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCch-----hhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP-----IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 100 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~-----~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.+..|-+|+-+.|+.+. ..|+.++||.-.......| .......+|+++|.++. --.|.--.-++.+...-.|
T Consensus 11 ~l~likQGAEArv~~~~--~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~-~~GI~~P~l~~~D~~~~~i 87 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGS--FSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCR-ALGIPAPRLIFIDTYGGQI 87 (229)
T ss_pred cceeeeccceeeEeeec--cCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHH-HhCCCCceEEEEecCCCeE
Confidence 45678899999999996 5688888886433333333 23456788999998875 3344333334566666788
Q ss_pred EEeccCC-CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 175 AMELCEG-GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 175 v~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+|||++| -++.+++...+ .......-...++..|-+.+.-||.++|||+||..+||++.+.+.+
T Consensus 88 ~ME~~~g~~~vk~~i~~~~---------------~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~ 152 (229)
T KOG3087|consen 88 YMEFIDGASTVKDFILSTM---------------EDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQ 152 (229)
T ss_pred EEEeccchhHHHHHHHHHc---------------cCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCc
Confidence 9999987 35666665432 1233334447889999999999999999999999999999987777
Q ss_pred CCeeEEecCCCccc
Q 008127 254 SSLKATDFGLSDFI 267 (577)
Q Consensus 254 ~~vkl~DFGla~~~ 267 (577)
..+.|+|||++...
T Consensus 153 ~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 153 ITPILIDFGLSSVS 166 (229)
T ss_pred CceEEEeecchhcc
Confidence 77899999998653
No 458
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.28 E-value=5.7e-10 Score=113.02 Aligned_cols=226 Identities=17% Similarity=0.212 Sum_probs=158.4
Q ss_pred CeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE----cCCeEEEEEeccCC-Cc
Q 008127 109 FGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE----DDNYVYIAMELCEG-GE 183 (577)
Q Consensus 109 fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~----~~~~~~lv~e~~~~-g~ 183 (577)
-.+.|++....+|..|++|++...+...+ .....-+++++++. |+|+|++.++|. .+..+++|++|+|+ ++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~---nk~t~lve~wkkl~-h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~T 364 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQST---NKDTSLVEAWKKLC-HTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPT 364 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCc---ccchHHHHHHHHhc-cCceeehhhhhhhhccCcceEEEEEecCCCCch
Confidence 45689999999999999999954332211 12334567889995 999999999887 35679999999986 57
Q ss_pred hhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCC
Q 008127 184 LLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263 (577)
Q Consensus 184 L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGl 263 (577)
|.+......... ....-.+...+...++..+|.++.|+..||.++|+.|+.-+=|.|.+||++. +..|+|.-.|.
T Consensus 365 L~d~~F~~~~~t--~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G---~~RIriS~C~i 439 (655)
T KOG3741|consen 365 LYDLYFANPPFT--KRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTG---KMRIRISGCGI 439 (655)
T ss_pred HHHHHccCCccc--cccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeC---cceEEEecccc
Confidence 777654332111 0011123345677899999999999999999999999999999999999983 44788888887
Q ss_pred CcccCCCCCccccccCCccccchhcccCCCCCCchhhHHHHHHHHHhCCCCCCCCCh-hHH-HHHHHhCCCCCCCCCCCC
Q 008127 264 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGI-FKEVLRNKPDFRRKPWPS 341 (577)
Q Consensus 264 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~-~~~-~~~i~~~~~~~~~~~~~~ 341 (577)
...+..... |-+.+ -.+-|.=.||.+++.|.||..-=+..+. .+. +..|. +.
T Consensus 440 ~Dvl~~d~~-------------~~le~--~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~-----------~~ 493 (655)
T KOG3741|consen 440 MDVLQEDPT-------------EPLES--QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRIT-----------TT 493 (655)
T ss_pred eeeecCCCC-------------cchhH--HhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHhh-----------hh
Confidence 665543320 11111 2346888999999999999665322221 111 11121 34
Q ss_pred CCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 342 ISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 342 ~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
+|.+++++|..+...++.+ -++.+++.+
T Consensus 494 yS~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 494 YSTDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred hhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 6788999999998888886 577777654
No 459
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.24 E-value=1.9e-11 Score=110.79 Aligned_cols=118 Identities=25% Similarity=0.248 Sum_probs=94.3
Q ss_pred HHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccc-----
Q 008127 417 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH----- 491 (577)
Q Consensus 417 ~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~----- 491 (577)
...-...+|+.||.|+||.|+..||..+|.. +-....++.+...|+.+|.|++|.|+.+|++.++..+..+...
T Consensus 62 ~~~y~~~vF~~fD~~~dg~i~F~Efi~als~-~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~ 140 (193)
T KOG0044|consen 62 ASKYAELVFRTFDKNKDGTIDFLEFICALSL-TSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPE 140 (193)
T ss_pred HHHHHHHHHHHhcccCCCCcCHHHHHHHHHH-HcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCc
Confidence 3456678899999999999999999999844 4455567888999999999999999999999988766655432
Q ss_pred ccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHH
Q 008127 492 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLE 535 (577)
Q Consensus 492 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~ 535 (577)
........+.++|+.+|.|+||.||.+||.........+-.++.
T Consensus 141 ~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d~~i~~~l~ 184 (193)
T KOG0044|consen 141 DEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKADPSILRALE 184 (193)
T ss_pred ccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhhCHHHHHHhh
Confidence 12223456788999999999999999999988876655555554
No 460
>PLN02964 phosphatidylserine decarboxylase
Probab=99.23 E-value=2.1e-11 Score=130.11 Aligned_cols=104 Identities=21% Similarity=0.308 Sum_probs=87.8
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCC-CCccHHH---HHHHHHhhcCCCCcceehhhHHHHHhhhhh
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP-WKLKESR---VLEILQAIDCNTDGLVDFSEFVAATLHVHQ 487 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~-~~~~~~~---~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~ 487 (577)
.|...++++++++|+.+|.|+||+| +..++ +.+| ..+++.+ ++.+|+.+|.|++|.|+|+||+.++....
T Consensus 136 ~f~~kqi~elkeaF~lfD~dgdG~i----Lg~il-rslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg- 209 (644)
T PLN02964 136 DFVTQEPESACESFDLLDPSSSNKV----VGSIF-VSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFG- 209 (644)
T ss_pred hccHHHHHHHHHHHHHHCCCCCCcC----HHHHH-HHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhc-
Confidence 4566788999999999999999997 77777 5688 5888887 89999999999999999999998876432
Q ss_pred hcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcC
Q 008127 488 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL 526 (577)
Q Consensus 488 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~ 526 (577)
.... .++++.+|+.||+|++|+|+.+||+.++..
T Consensus 210 --~~~s---eEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 210 --NLVA---ANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred --cCCC---HHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 1122 236888999999999999999999998876
No 461
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.23 E-value=1.9e-10 Score=102.29 Aligned_cols=135 Identities=25% Similarity=0.317 Sum_probs=96.6
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchh-----hHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPI-----AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~-----~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
..+++|+-+.+|.+.. -|..+++|.=.+.....+. ......+|..++.++. --.|..-+-+..+.....|+|
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~-~~GV~~P~v~dvD~~~~~I~m 78 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAR-EAGVPVPIVYDVDPDNGLIVM 78 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHH-HcCCCCCeEEEEcCCCCEEEE
Confidence 3588999999999954 3556777753332222222 3445678999998885 334433333445566678999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++|..|.+.+... ...++..+-.-+.-||..||||+||.++||++. ++.+
T Consensus 79 e~I~G~~lkd~l~~~------------------------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~----~~~i 130 (204)
T COG3642 79 EYIEGELLKDALEEA------------------------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILS----GGRI 130 (204)
T ss_pred EEeCChhHHHHHHhc------------------------chHHHHHHHHHHHHHHhcCeecCCCccceEEEe----CCcE
Confidence 999887777666321 245677788888899999999999999999997 4559
Q ss_pred eEEecCCCccc
Q 008127 257 KATDFGLSDFI 267 (577)
Q Consensus 257 kl~DFGla~~~ 267 (577)
.++||||+...
T Consensus 131 ~~IDfGLg~~s 141 (204)
T COG3642 131 YFIDFGLGEFS 141 (204)
T ss_pred EEEECCccccc
Confidence 99999999754
No 462
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=99.21 E-value=2.4e-11 Score=100.96 Aligned_cols=95 Identities=24% Similarity=0.433 Sum_probs=78.6
Q ss_pred HHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC--------
Q 008127 457 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------- 528 (577)
Q Consensus 457 ~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-------- 528 (577)
.-++|...+..||.|.++|++|+.++.....+.+. ..++..||+.||-|+|++|..++|...+..+.
T Consensus 72 fk~ri~e~FSeDG~GnlsfddFlDmfSV~sE~APr-----dlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eE 146 (189)
T KOG0038|consen 72 FKRRICEVFSEDGRGNLSFDDFLDMFSVFSEMAPR-----DLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEE 146 (189)
T ss_pred HHHHHHHHhccCCCCcccHHHHHHHHHHHHhhChH-----HhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHH
Confidence 34566677788999999999999987765544332 34778899999999999999999998876553
Q ss_pred ---cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 529 ---SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 529 ---~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
.++.+++++|.||||+++|.||..++.+
T Consensus 147 v~~i~ekvieEAD~DgDgkl~~~eFe~~i~r 177 (189)
T KOG0038|consen 147 VELICEKVIEEADLDGDGKLSFAEFEHVILR 177 (189)
T ss_pred HHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Confidence 2788999999999999999999988865
No 463
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=99.12 E-value=7e-11 Score=93.95 Aligned_cols=69 Identities=25% Similarity=0.408 Sum_probs=62.0
Q ss_pred HHHhhhccccccccC-CCCCCCCHHHHHHHHHhhCCCCccH-HHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 416 EELADLRDQFDAIDV-DKNGSISLEEMRQALAKDLPWKLKE-SRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 416 ~~~~~l~~~F~~~D~-d~dG~i~~~el~~~l~~~~~~~~~~-~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
..+..|..+|+.||. +++|+|+..||+.+|...+|...++ .+++.||+.+|.|+||.|+|+||+.++..
T Consensus 5 ~ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 5 KAIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 456789999999999 9999999999999996558877777 89999999999999999999999987654
No 464
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.12 E-value=8.6e-11 Score=89.02 Aligned_cols=55 Identities=47% Similarity=0.733 Sum_probs=49.9
Q ss_pred HHHHHhhcCCCCCCcccHHHHhhhhcCcC----------cHHHHHHHhCCCCCCcccHHHHHHHH
Q 008127 500 SQAAFEKFDIDRDGFITPEELRMHTGLKG----------SIDPLLEEADIDKDGRISLSEFRRLL 554 (577)
Q Consensus 500 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~----------~~~~~~~~~D~d~dG~i~~~EF~~~l 554 (577)
++++|+.+|+|++|+|+.+||+.++...+ .+..+|+.+|+|+||.|+|+||+.+|
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 67799999999999999999999988776 26677999999999999999999876
No 465
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.12 E-value=1.7e-09 Score=106.98 Aligned_cols=246 Identities=19% Similarity=0.198 Sum_probs=158.2
Q ss_pred eeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEE-----E-Ec-CCe
Q 008127 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNA-----F-ED-DNY 171 (577)
Q Consensus 99 ~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~-----~-~~-~~~ 171 (577)
..++.||+|+-+.+|-.-.- + ..+.|++..... ..... .+..|-..-.||-+-.-+.+ + .. ...
T Consensus 14 ~~gr~LgqGgea~ly~l~e~--~-d~VAKIYh~Ppp---a~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~ 84 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV--R-DQVAKIYHAPPP---AAQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKV 84 (637)
T ss_pred CCCccccCCccceeeecchh--h-chhheeecCCCc---hHHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCccce
Confidence 35678999999999977322 2 234587765532 12222 22334444456644331111 0 11 223
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+.++|..++|..=-..+..- ...-+........-+.+++..|+.+...||..|.+-+|++++|+|++
T Consensus 85 iGflmP~v~g~~pI~~~y~p----------~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVs--- 151 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSP----------ATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVS--- 151 (637)
T ss_pred eEEecccCCCccchhhhcCc----------hhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeee---
Confidence 67888888775322212110 01111223466778899999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCCCccccccCCccccchhcc-----cC-CCCCCchhhHHHHHHHHHhC-CCCCCCC----Ch
Q 008127 252 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-----RK-SGPESDVWSIGVITYILLCG-RRPFWDK----TE 320 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~-----~~-~~~~~DiwSlG~il~el~tg-~~Pf~~~----~~ 320 (577)
+++.|.|+|-..-.....+..+...+|.+.|.+||.-+ +. -....|.|.||+++++++.| ++||.+- ..
T Consensus 152 d~~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~a 231 (637)
T COG4248 152 DDSKVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDA 231 (637)
T ss_pred cCceEEEEcccceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCC
Confidence 57889999866555444555566678999999999754 22 25678999999999999986 9999652 11
Q ss_pred hHHHH-HHHhC------------CCCCCCCCCCCCCHHHHHHHHHcccc--CcCCCCCHHH
Q 008127 321 DGIFK-EVLRN------------KPDFRRKPWPSISNSAKDFVKKLLVK--DPRARLTAAQ 366 (577)
Q Consensus 321 ~~~~~-~i~~~------------~~~~~~~~~~~~s~~~~~li~~~l~~--dP~~Rpt~~~ 366 (577)
...++ .|..+ .+.....+|.-+++.++.|..+|+.. ++.-|||++.
T Consensus 232 p~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a 292 (637)
T COG4248 232 PNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA 292 (637)
T ss_pred CCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence 11122 22211 11122234566889999999999984 3558998764
No 466
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=99.11 E-value=1.6e-10 Score=91.97 Aligned_cols=62 Identities=16% Similarity=0.269 Sum_probs=55.3
Q ss_pred HHHHHHHHhhcCC-CCCCcccHHHHhhhhcC-cC-------cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 497 HLRSQAAFEKFDI-DRDGFITPEELRMHTGL-KG-------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 497 ~~~~~~~F~~~D~-d~~G~I~~~El~~~l~~-~~-------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
...++.+|+.||+ +++|+|+.+||+.++.. ++ +++++|+.+|.|+||+|+|+||+.+|.+..
T Consensus 7 i~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~ 77 (89)
T cd05022 7 IETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGELA 77 (89)
T ss_pred HHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 3468889999999 99999999999999877 54 389999999999999999999999997643
No 467
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.10 E-value=2e-10 Score=103.40 Aligned_cols=92 Identities=27% Similarity=0.462 Sum_probs=80.1
Q ss_pred HHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHH
Q 008127 417 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 496 (577)
Q Consensus 417 ~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~ 496 (577)
-++.++.+|..+|+|+.|.|+..||+.+|. .+|+.++++.++.|++.+|.-++|.|+|++|+..+....
T Consensus 122 ~i~~Wr~vF~~~D~D~SG~I~~sEL~~Al~-~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L~---------- 190 (221)
T KOG0037|consen 122 YINQWRNVFRTYDRDRSGTIDSSELRQALT-QLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVLQ---------- 190 (221)
T ss_pred HHHHHHHHHHhcccCCCCcccHHHHHHHHH-HcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHHH----------
Confidence 467899999999999999999999999995 599999999999999999988899999999998775432
Q ss_pred HHHHHHHHhhcCCCCCCccc--HHHHh
Q 008127 497 HLRSQAAFEKFDIDRDGFIT--PEELR 521 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~--~~El~ 521 (577)
.+.++|+.+|++.+|.|+ .++|.
T Consensus 191 --~lt~~Fr~~D~~q~G~i~~~y~dfl 215 (221)
T KOG0037|consen 191 --RLTEAFRRRDTAQQGSITISYDDFL 215 (221)
T ss_pred --HHHHHHHHhccccceeEEEeHHHHH
Confidence 455699999999999875 34544
No 468
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.10 E-value=6.8e-10 Score=106.22 Aligned_cols=84 Identities=32% Similarity=0.474 Sum_probs=61.4
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcC-CCCeeEEEEEEEcC---CeEEEEEe
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG-HENVVKFYNAFEDD---NYVYIAME 177 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~-hpniv~~~~~~~~~---~~~~lv~e 177 (577)
+.||.|..+.||++... +|+.+++|........ .....+.+|+.+++.+.. +..+++++.+.... +..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 56899999999999753 3689999987654321 134567899999999963 23467777766653 36789999
Q ss_pred ccCCCchhHHH
Q 008127 178 LCEGGELLDRI 188 (577)
Q Consensus 178 ~~~~g~L~~~l 188 (577)
|++|.++.+.+
T Consensus 81 ~i~G~~l~~~~ 91 (223)
T cd05154 81 RVDGRVLRDRL 91 (223)
T ss_pred EeCCEecCCCC
Confidence 99998876543
No 469
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.07 E-value=1.3e-10 Score=87.96 Aligned_cols=62 Identities=32% Similarity=0.575 Sum_probs=52.5
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCcc----HHHHHHHHHhhcCCCCcceehhhHHHHH
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK----ESRVLEILQAIDCNTDGLVDFSEFVAAT 482 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~----~~~~~~~~~~~D~d~dg~i~f~EF~~~~ 482 (577)
+|+++|+.+|+|++|+|+.+||..++.. ++.... ...++.+|+.+|.|+||.|+|+||+.++
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKH-LGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH-TTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHH-hcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 4788999999999999999999999954 665443 4456667999999999999999998653
No 470
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=99.04 E-value=7.6e-10 Score=108.45 Aligned_cols=148 Identities=25% Similarity=0.305 Sum_probs=109.6
Q ss_pred HhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccccc----
Q 008127 418 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS---- 493 (577)
Q Consensus 418 ~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~---- 493 (577)
..+|...|+.+|.++.|+|+......++...+|.++.=..+..- ....+.||.|.|.+-+..+.......+...
T Consensus 463 ~sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~k--la~~s~d~~v~Y~~~~~~l~~e~~~~ea~~slve 540 (631)
T KOG0377|consen 463 RSDLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLRPK--LANGSDDGKVEYKSTLDNLDTEVILEEAGSSLVE 540 (631)
T ss_pred hhHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhhh--ccCCCcCcceehHhHHHHhhhhhHHHHHHhHHHH
Confidence 45788889999999999999999999998888877653333222 234456889999988765433222211100
Q ss_pred --HHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----------cHHHHHHHhCCCCCCcccHHHHHHHHhhcccCC
Q 008127 494 --EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----------SIDPLLEEADIDKDGRISLSEFRRLLRTASISS 561 (577)
Q Consensus 494 --~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~~~~ 561 (577)
-.....+..+|+.+|+|++|.||.+||+.+....+ ++.++-+.+|.|+||.|++.||+++++-+.-..
T Consensus 541 tLYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlvdr~~ 620 (631)
T KOG0377|consen 541 TLYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLVDRRR 620 (631)
T ss_pred HHHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhhcchh
Confidence 01134678899999999999999999998775543 488889999999999999999999999876655
Q ss_pred CCCCCC
Q 008127 562 RNVPPS 567 (577)
Q Consensus 562 ~~~~~~ 567 (577)
+...|.
T Consensus 621 ~~~~p~ 626 (631)
T KOG0377|consen 621 STGRPS 626 (631)
T ss_pred hcCCCc
Confidence 444443
No 471
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=99.03 E-value=4e-10 Score=89.82 Aligned_cols=69 Identities=20% Similarity=0.338 Sum_probs=60.9
Q ss_pred HHHhhhcccccccc-CCCCC-CCCHHHHHHHHHh----hCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 416 EELADLRDQFDAID-VDKNG-SISLEEMRQALAK----DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 416 ~~~~~l~~~F~~~D-~d~dG-~i~~~el~~~l~~----~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
..+..++++|+.|| .|+|| +|+.+||+.+|.. .+|..+++++++.+++.+|.|++|.|+|+||+.++..
T Consensus 5 ~~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 5 KAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 45678999999998 89999 5999999999953 2788889999999999999999999999999976653
No 472
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.97 E-value=6.6e-10 Score=116.67 Aligned_cols=154 Identities=22% Similarity=0.290 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCCcc----------ccccCCccccchhc
Q 008127 220 VRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ----------DIVGSAYYVAPEVL 288 (577)
Q Consensus 220 ~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~~~----------~~~gt~~y~aPE~~ 288 (577)
+.+++.|+.|+|. .++||+.|.|++|.++ .++..||+.|+++....+...+. -..-...|.|||++
T Consensus 105 l~~v~dgl~flh~sAk~VH~ni~p~~i~~n---a~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~ 181 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSAKVVHGNIQPEAIVVN---ANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYL 181 (700)
T ss_pred hhcccchhhhhccCcceeecccchhheeec---cCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhh
Confidence 3455599999997 5899999999999998 58899999999987655422211 01234569999988
Q ss_pred ccCC-CCCCchhhHHHHHHHHH-hCCCCCCCCChhHHHHHHHhCCCCCCC-CCCCCCCHHHHHHHHHccccCcCCCCCHH
Q 008127 289 KRKS-GPESDVWSIGVITYILL-CGRRPFWDKTEDGIFKEVLRNKPDFRR-KPWPSISNSAKDFVKKLLVKDPRARLTAA 365 (577)
Q Consensus 289 ~~~~-~~~~DiwSlG~il~el~-tg~~Pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~s~~~~~li~~~l~~dP~~Rpt~~ 365 (577)
.+.. +.++|++|+||++|.+. .|+..+.+......+... ........ ..-..++.++++=|.++|..++..||++.
T Consensus 182 ~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~-~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~ 260 (700)
T KOG2137|consen 182 LGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFS-RNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLD 260 (700)
T ss_pred ccccccccccceeeeeEEEEEecCCcchhhccCCcchhhhh-hcccccccccccccCcHHHHHHHHHHhcCCcccCcchh
Confidence 7644 78999999999999999 455555444332222211 11111111 01146889999999999999999999999
Q ss_pred HHhcCccccccC
Q 008127 366 QALSHPWVREGG 377 (577)
Q Consensus 366 ~il~hp~f~~~~ 377 (577)
.++..|||.+..
T Consensus 261 ~l~~~~ff~D~~ 272 (700)
T KOG2137|consen 261 LLLSIPFFSDPG 272 (700)
T ss_pred hhhcccccCCch
Confidence 999999999864
No 473
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.96 E-value=1.4e-09 Score=86.75 Aligned_cols=60 Identities=20% Similarity=0.323 Sum_probs=53.9
Q ss_pred HHHHHHHhhcC-CCCCC-cccHHHHhhhhcC-----cC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 498 LRSQAAFEKFD-IDRDG-FITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 498 ~~~~~~F~~~D-~d~~G-~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
..++++|+.|| +||+| +|+.+||+.+|+. .+ +++++++.+|.|+||+|+|+||+.++...
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~ 80 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMV 80 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 46788999998 89999 5999999999987 55 39999999999999999999999998754
No 474
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.94 E-value=1.5e-09 Score=88.82 Aligned_cols=73 Identities=22% Similarity=0.363 Sum_probs=64.9
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhh
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 487 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~ 487 (577)
.++++++..++++|..+|.|++|.|+.+||..+|.. .| +++.++..++..+|.+++|.|+|+||+.++.....
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~-~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~ 75 (96)
T smart00027 3 AISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLK-SG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYR 75 (96)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH-cC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHH
Confidence 357789999999999999999999999999999954 55 67889999999999999999999999988765544
No 475
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.94 E-value=6.7e-09 Score=95.52 Aligned_cols=130 Identities=26% Similarity=0.301 Sum_probs=81.1
Q ss_pred EEEEEEEcCCCCEEEEEEecccc-----------------------cCchhhHHHHHHHHHHHHHhcCC-CCeeEEEEEE
Q 008127 111 YTYVATDKANGDRVAVKKIEKNK-----------------------MILPIAVEDVKREVKILQALAGH-ENVVKFYNAF 166 (577)
Q Consensus 111 ~V~~~~~~~~~~~vaiK~i~~~~-----------------------~~~~~~~~~~~~E~~~l~~l~~h-pniv~~~~~~ 166 (577)
.||.|.. ..|..+|||+..... .+.........+|.+.|.++... -++++.+++.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 3888975 467799999763310 11112345678999999999633 2566766543
Q ss_pred EcCCeEEEEEeccC--CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHH-HHhcCceeccCCCC
Q 008127 167 EDDNYVYIAMELCE--GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAE-CHLHGLVHRDMKPE 243 (577)
Q Consensus 167 ~~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~-LH~~~iiHrDlKp~ 243 (577)
. -+|||||++ |..+ ..+... .++......++.+++..+.. +|..||||+||.+.
T Consensus 80 --~--~~ivME~I~~~G~~~-~~l~~~------------------~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~ 136 (188)
T PF01163_consen 80 --R--NVIVMEYIGEDGVPL-PRLKDV------------------DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEY 136 (188)
T ss_dssp --T--TEEEEE--EETTEEG-GCHHHC------------------GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STT
T ss_pred --C--CEEEEEecCCCccch-hhHHhc------------------cccchhHHHHHHHHHHHHHHHHHhcCceecCCChh
Confidence 2 369999997 4433 323221 11234456778888886655 57999999999999
Q ss_pred cEEeecCCCCCCeeEEecCCCcccC
Q 008127 244 NFLFKSAKEDSSLKATDFGLSDFIK 268 (577)
Q Consensus 244 NILl~~~~~~~~vkl~DFGla~~~~ 268 (577)
|||++ ++.+.|+|||.|....
T Consensus 137 NIlv~----~~~~~iIDf~qav~~~ 157 (188)
T PF01163_consen 137 NILVD----DGKVYIIDFGQAVDSS 157 (188)
T ss_dssp SEEEE----TTCEEE--GTTEEETT
T ss_pred hEEee----cceEEEEecCcceecC
Confidence 99998 3489999999886543
No 476
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.93 E-value=3.4e-08 Score=96.39 Aligned_cols=139 Identities=17% Similarity=0.126 Sum_probs=92.6
Q ss_pred eEEEEEEEcCCCCEEEEEEecccccC---ch-----hhHHHHHHHHHHHHHhcCCCCe--eEEEEEEEc-----CCeEEE
Q 008127 110 GYTYVATDKANGDRVAVKKIEKNKMI---LP-----IAVEDVKREVKILQALAGHENV--VKFYNAFED-----DNYVYI 174 (577)
Q Consensus 110 g~V~~~~~~~~~~~vaiK~i~~~~~~---~~-----~~~~~~~~E~~~l~~l~~hpni--v~~~~~~~~-----~~~~~l 174 (577)
..|+.+. ..|+.|.||........ .. .....+.+|...+.+|. .-+| +..+.+.+. ...-+|
T Consensus 36 rrvvr~~--~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~-~~GIptP~pVa~~e~~~~~~~~~s~L 112 (268)
T PRK15123 36 RRTLRFE--LAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLH-EVGVDTMTGVAFGERGSNPATRTSFI 112 (268)
T ss_pred ceEEEEE--ECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHH-HcCCCCCCeeEEEEecCCCccceeEE
Confidence 3355553 45778888966332210 00 11124678988888874 2222 233333332 235789
Q ss_pred EEeccCCC-chhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec----
Q 008127 175 AMELCEGG-ELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS---- 249 (577)
Q Consensus 175 v~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~---- 249 (577)
|||++++. +|.+.+... .....+......++.+++..+.-||..||+|+||+|.|||++.
T Consensus 113 Vte~l~~~~sL~~~~~~~---------------~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~ 177 (268)
T PRK15123 113 ITEDLAPTISLEDYCADW---------------ATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPG 177 (268)
T ss_pred EEeeCCCCccHHHHHHhh---------------cccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccC
Confidence 99999875 676655321 1134556777889999999999999999999999999999984
Q ss_pred CCCCCCeeEEecCCCcc
Q 008127 250 AKEDSSLKATDFGLSDF 266 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~ 266 (577)
.+++..+.|+||+.+..
T Consensus 178 ~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 178 REEDLKLSVIDLHRAQI 194 (268)
T ss_pred CCCCceEEEEECCcccc
Confidence 12357899999998864
No 477
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=98.92 E-value=9.3e-09 Score=90.07 Aligned_cols=107 Identities=22% Similarity=0.323 Sum_probs=78.0
Q ss_pred hccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhh
Q 008127 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 488 (577)
Q Consensus 409 ~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~ 488 (577)
.....+.. .+.++|..+|. ++|.|+..+|..+|...+....+++++...|+.+|.|+||.|+..|...++.. +
T Consensus 49 lg~~~s~~---ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~---l 121 (160)
T COG5126 49 LGFNPSEA---EINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGDKEEELREAFKLFDKDHDGYISIGELRRVLKS---L 121 (160)
T ss_pred cCCCCcHH---HHHHHHHhccC-CCCccCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHh---h
Confidence 34444444 45566777777 88888888888888776667777888888888888888888888888876642 2
Q ss_pred cccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 489 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 489 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
.+... ...+.+.++.+|.|++|+|+.+||.+++.
T Consensus 122 ge~~~---deev~~ll~~~d~d~dG~i~~~eF~~~~~ 155 (160)
T COG5126 122 GERLS---DEEVEKLLKEYDEDGDGEIDYEEFKKLIK 155 (160)
T ss_pred cccCC---HHHHHHHHHhcCCCCCceEeHHHHHHHHh
Confidence 11111 23677788888888888888888887553
No 478
>PTZ00183 centrin; Provisional
Probab=98.91 E-value=4.4e-09 Score=94.88 Aligned_cols=101 Identities=18% Similarity=0.277 Sum_probs=82.6
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHH
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 499 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~ 499 (577)
.+..+|..+|.+++|.|+..||..++............++.+|+.+|.+++|.|+.+||..++..... ... ...
T Consensus 54 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~---~l~---~~~ 127 (158)
T PTZ00183 54 EIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILKAFRLFDDDKTGKISLKNLKRVAKELGE---TIT---DEE 127 (158)
T ss_pred HHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC---CCC---HHH
Confidence 56788999999999999999999988654445566788999999999999999999999987754321 111 135
Q ss_pred HHHHHhhcCCCCCCcccHHHHhhhhcC
Q 008127 500 SQAAFEKFDIDRDGFITPEELRMHTGL 526 (577)
Q Consensus 500 ~~~~F~~~D~d~~G~I~~~El~~~l~~ 526 (577)
+..+|..+|.|++|.|+.+||..++..
T Consensus 128 ~~~~~~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 128 LQEMIDEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 778999999999999999999988754
No 479
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.91 E-value=2.1e-09 Score=87.03 Aligned_cols=69 Identities=25% Similarity=0.366 Sum_probs=58.7
Q ss_pred HHHhhhcccccccc-CCCCC-CCCHHHHHHHHHhhC----CCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 416 EELADLRDQFDAID-VDKNG-SISLEEMRQALAKDL----PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 416 ~~~~~l~~~F~~~D-~d~dG-~i~~~el~~~l~~~~----~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
..+..+.++|+.|| .|+|| +|+..||+.+|...+ +...++.+++.+++.+|.|+||.|+|+||+.++..
T Consensus 7 ~a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~ 81 (93)
T cd05026 7 GAMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAA 81 (93)
T ss_pred HHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 45678899999999 88999 599999999996533 34457789999999999999999999999987654
No 480
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.89 E-value=2.7e-09 Score=85.10 Aligned_cols=69 Identities=22% Similarity=0.394 Sum_probs=61.4
Q ss_pred hHHHhhhccccccccC-CC-CCCCCHHHHHHHHHh--hCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 415 DEELADLRDQFDAIDV-DK-NGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D~-d~-dG~i~~~el~~~l~~--~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
++.+..+-.+|+.+|. |+ +|+|+.+||+.+|.+ .+|..+++++++++|+.+|.|++|.|+|+||+..+.
T Consensus 6 e~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~ 78 (88)
T cd05029 6 DQAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLG 78 (88)
T ss_pred HHHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHH
Confidence 3556788999999998 77 899999999999964 368899999999999999999999999999997664
No 481
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=98.89 E-value=8.2e-09 Score=92.22 Aligned_cols=98 Identities=26% Similarity=0.281 Sum_probs=82.3
Q ss_pred HHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------
Q 008127 455 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------ 528 (577)
Q Consensus 455 ~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------ 528 (577)
..++..+|..+|.|++|.|+-.|+-.++........ ...+..+++.+|.|++|.|+.+||..++....
T Consensus 7 ~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t------~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~ 80 (151)
T KOG0027|consen 7 ILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPT------EEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDE 80 (151)
T ss_pred HHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCC------HHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccc
Confidence 357889999999999999999999987765433211 23677899999999999999999998886432
Q ss_pred -----cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 529 -----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 529 -----~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
++.++|+.+|.|+||.|+.+|+..+|....
T Consensus 81 ~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg 115 (151)
T KOG0027|consen 81 EASSEELKEAFRVFDKDGDGFISASELKKVLTSLG 115 (151)
T ss_pred cccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhC
Confidence 588999999999999999999999998754
No 482
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.89 E-value=1.3e-08 Score=96.08 Aligned_cols=138 Identities=28% Similarity=0.316 Sum_probs=101.8
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEeccc-------------------ccCchhhHHHHHHHHHHHHHhcCC-C
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKN-------------------KMILPIAVEDVKREVKILQALAGH-E 157 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~-------------------~~~~~~~~~~~~~E~~~l~~l~~h-p 157 (577)
+.++.+||-|.-+.||.|.+. .|.++|||.-... ..+.-.......+|.++|.+|..+ -
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 567889999999999999865 6889999953210 001122345678999999999533 2
Q ss_pred CeeEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCcee
Q 008127 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 237 (577)
Q Consensus 158 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiH 237 (577)
.+++-++ -+...+||||+.|-.|.. -++..+....++..|++-+.-+-..||||
T Consensus 172 ~VP~P~~----~nRHaVvMe~ieG~eL~~----------------------~r~~~en~~~il~~il~~~~~~~~~GiVH 225 (304)
T COG0478 172 KVPKPIA----WNRHAVVMEYIEGVELYR----------------------LRLDVENPDEILDKILEEVRKAYRRGIVH 225 (304)
T ss_pred CCCCccc----cccceeeeehcccceeec----------------------ccCcccCHHHHHHHHHHHHHHHHHcCccc
Confidence 4554443 234679999999876643 22345666777888888888778999999
Q ss_pred ccCCCCcEEeecCCCCCCeeEEecCCCc
Q 008127 238 RDMKPENFLFKSAKEDSSLKATDFGLSD 265 (577)
Q Consensus 238 rDlKp~NILl~~~~~~~~vkl~DFGla~ 265 (577)
+|+.+=||+++ +++.+.++||=-+.
T Consensus 226 GDlSefNIlV~---~dg~~~vIDwPQ~v 250 (304)
T COG0478 226 GDLSEFNILVT---EDGDIVVIDWPQAV 250 (304)
T ss_pred cCCchheEEEe---cCCCEEEEeCcccc
Confidence 99999999998 57899999996543
No 483
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.88 E-value=4.4e-09 Score=85.12 Aligned_cols=60 Identities=18% Similarity=0.308 Sum_probs=52.3
Q ss_pred HHHHHHHhhcC-CCCCC-cccHHHHhhhhcCc------C-----cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 498 LRSQAAFEKFD-IDRDG-FITPEELRMHTGLK------G-----SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 498 ~~~~~~F~~~D-~d~~G-~I~~~El~~~l~~~------~-----~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
..++++|..|| +||+| +|+.+||+.++... + +++++++.+|.|+||.|+|+||+.+|...
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 46788999999 89999 59999999998541 1 49999999999999999999999999764
No 484
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.84 E-value=5.7e-09 Score=84.62 Aligned_cols=68 Identities=28% Similarity=0.404 Sum_probs=58.3
Q ss_pred HHhhhcccccccc-CCCCCC-CCHHHHHHHHHhhC----CCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 417 ELADLRDQFDAID-VDKNGS-ISLEEMRQALAKDL----PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 417 ~~~~l~~~F~~~D-~d~dG~-i~~~el~~~l~~~~----~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
-+..++++|+.|| .|++|+ |+..||+.+|...+ +..+++.+++.+|+.+|.|++|.|+|+||+.++..
T Consensus 7 ~~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (92)
T ss_pred HHHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 3467999999997 999995 99999999995433 34578899999999999999999999999986653
No 485
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.83 E-value=4.9e-09 Score=84.33 Aligned_cols=70 Identities=26% Similarity=0.434 Sum_probs=60.7
Q ss_pred hHHHhhhccccccccC--CCCCCCCHHHHHHHHHhhCCCC----ccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 415 DEELADLRDQFDAIDV--DKNGSISLEEMRQALAKDLPWK----LKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D~--d~dG~i~~~el~~~l~~~~~~~----~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
+++++.++++|..+|. |++|.|+.+||..++...+|.. +++.++..++..+|.+++|.|+|+||+.++..
T Consensus 4 ~~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~ 79 (88)
T cd00213 4 EKAIETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGK 79 (88)
T ss_pred HHHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHH
Confidence 4678889999999999 8999999999999995435544 45899999999999999999999999987653
No 486
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.82 E-value=4.8e-09 Score=85.37 Aligned_cols=68 Identities=26% Similarity=0.391 Sum_probs=59.3
Q ss_pred HHhhhccccccccC-CC-CCCCCHHHHHHHHHhh----CCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 417 ELADLRDQFDAIDV-DK-NGSISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 417 ~~~~l~~~F~~~D~-d~-dG~i~~~el~~~l~~~----~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
....++++|..||. |+ +|+|+..||..+|... +|..+++.+++.+++.+|.+++|.|+|+||+.++..
T Consensus 6 ~~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 6 AMESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAG 79 (94)
T ss_pred HHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 45679999999997 97 6999999999999532 466789999999999999999999999999987653
No 487
>PTZ00184 calmodulin; Provisional
Probab=98.80 E-value=2.6e-08 Score=88.72 Aligned_cols=101 Identities=22% Similarity=0.337 Sum_probs=81.3
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~ 498 (577)
..+..+|..+|.+++|.|+.+||..++...+........+..+|..+|.+++|.|+.+||..++..... ... ..
T Consensus 47 ~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~---~~~---~~ 120 (149)
T PTZ00184 47 AELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGE---KLT---DE 120 (149)
T ss_pred HHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCC---CCC---HH
Confidence 367888999999999999999999988543444456678899999999999999999999877654311 111 13
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
.+..+|+.+|.+++|.|+.+||..++.
T Consensus 121 ~~~~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 121 EVDEMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred HHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence 567789999999999999999987764
No 488
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=98.79 E-value=2.8e-08 Score=90.33 Aligned_cols=112 Identities=21% Similarity=0.237 Sum_probs=87.5
Q ss_pred hccccccccCCCCCC-CCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccc-ccHHHHH
Q 008127 421 LRDQFDAIDVDKNGS-ISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH-DSEKWHL 498 (577)
Q Consensus 421 l~~~F~~~D~d~dG~-i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~-~~~~~~~ 498 (577)
..++|+.||++++|. |+.++|..++.-..+....++.++-.|+.+|.+++|.|+.+|+..++......... ..+....
T Consensus 68 ~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~ 147 (187)
T KOG0034|consen 68 ADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLED 147 (187)
T ss_pred HHHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHH
Confidence 356788899999998 99999999995544555555689999999999999999999999877654332111 1233445
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHH
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDP 532 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~ 532 (577)
.+..+|..+|.|+||+|+.+|+..++.....+.+
T Consensus 148 i~d~t~~e~D~d~DG~IsfeEf~~~v~~~P~~~~ 181 (187)
T KOG0034|consen 148 IVDKTFEEADTDGDGKISFEEFCKVVEKQPDLLE 181 (187)
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHcCccHHH
Confidence 6788999999999999999999998876644444
No 489
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.79 E-value=1.1e-08 Score=81.74 Aligned_cols=62 Identities=23% Similarity=0.392 Sum_probs=53.7
Q ss_pred HHHHHHHHhh-cCCCCCC-cccHHHHhhhhcCc-----------CcHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 497 HLRSQAAFEK-FDIDRDG-FITPEELRMHTGLK-----------GSIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 497 ~~~~~~~F~~-~D~d~~G-~I~~~El~~~l~~~-----------~~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
...+..+|+. +|+||+| +|+.+||+.++... .+++++|+.+|.|+||.|+|+||+.+|....
T Consensus 8 i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l~ 82 (89)
T cd05023 8 IESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLA 82 (89)
T ss_pred HHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence 3467889999 7899987 99999999998765 1499999999999999999999999987643
No 490
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.77 E-value=1.6e-08 Score=80.64 Aligned_cols=62 Identities=23% Similarity=0.317 Sum_probs=53.8
Q ss_pred HHHHHHHHhhcCC-CC-CCcccHHHHhhhhcC---cC------cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 497 HLRSQAAFEKFDI-DR-DGFITPEELRMHTGL---KG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 497 ~~~~~~~F~~~D~-d~-~G~I~~~El~~~l~~---~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
...+..+|..||. || +|+|+.+||+.++.. .| +++++|+.+|.|+||+|+|+||+.+|.+..
T Consensus 9 ~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l~ 81 (88)
T cd05029 9 IGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGALA 81 (88)
T ss_pred HHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHH
Confidence 3467889999998 77 899999999999952 34 499999999999999999999999997643
No 491
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.77 E-value=1.3e-08 Score=77.17 Aligned_cols=61 Identities=31% Similarity=0.367 Sum_probs=54.1
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 421 l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
++++|..+|.|++|.|+.+||..++.. +|. ++++++.++..+|.+++|.|+|+||+.++..
T Consensus 1 ~~~~F~~~D~~~~G~i~~~el~~~l~~-~g~--~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 1 YDQIFRSLDPDGDGLISGDEARPFLGK-SGL--PRSVLAQIWDLADTDKDGKLDKEEFAIAMHL 61 (67)
T ss_pred ChHHHHHhCCCCCCcCcHHHHHHHHHH-cCC--CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 357899999999999999999999954 664 7889999999999999999999999987654
No 492
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.77 E-value=8.5e-10 Score=114.38 Aligned_cols=240 Identities=18% Similarity=0.218 Sum_probs=167.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCC-eeEEEEEEEcCCeEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN-VVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpn-iv~~~~~~~~~~~~~lv 175 (577)
-|....-+++|+++++++.+...+...+ .+.+... ....-++++|.++ +||| .+..++-++.+.+.+++
T Consensus 243 ws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~--------l~~rl~~eLLdK~-n~P~~~v~~~~d~~~E~~~~i~ 312 (829)
T KOG0576|consen 243 WSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT--------LSRRLAIELLDKV-NNPNPVVRYLEDYDGEDYLWIP 312 (829)
T ss_pred chHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc--------hhhHHHHHHHHHc-cCCCCcccccccCCcccccchh
Confidence 3555566899999999999876665554 6665432 3456688999999 5999 77777777888899999
Q ss_pred EeccCCC-chhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 176 MELCEGG-ELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 176 ~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
+++|.++ +...... ...-.+.+-+...+...-+++++++|+..=+||| |||.. ++
T Consensus 313 ~~i~s~~rs~~~~~~----------------~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s----~~ 368 (829)
T KOG0576|consen 313 MRICSTGRSSALEMT----------------VSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGS----EE 368 (829)
T ss_pred hhhhcCCccccccCC----------------hhhHhhhhhhhhhhhhhhcccccccccccccCcc----ccccc----cc
Confidence 9999887 2221110 0012234445566777888899999998889999 88876 46
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC--
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK-- 331 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~-- 331 (577)
.+|+.||+....+..........+|+.|+|||+.. +.+....|+||+|+-..+|.-|-+|-.. +......+-.+.
T Consensus 369 ~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~--P~~~~~~~g~~p~s 446 (829)
T KOG0576|consen 369 EVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSS--PPAVLPMIGNGPNS 446 (829)
T ss_pred ccccccccCCcccCcccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCC--CccccCCCCCCCCc
Confidence 78999999988776655566788999999999765 4567889999999988888888777532 111110000000
Q ss_pred CCCCC-CCCCCCCHHHH-HHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 332 PDFRR-KPWPSISNSAK-DFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 332 ~~~~~-~~~~~~s~~~~-~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
+.... ..|. +... ++...|+..-|..|+....++-|.+|..
T Consensus 447 ~~L~~~~aw~---~~~~~~~~~~~~~g~P~~pkv~mgacfsKvfng 489 (829)
T KOG0576|consen 447 PMLTDKSAWS---PVFHRDFPAPCLNGLPPTPKVHMGACFSKVFNG 489 (829)
T ss_pred cccchhhhcC---cccccCCcccccCCCCCCCcchhhHHHHHHhcc
Confidence 00000 1111 1112 4777899999999999999999988875
No 493
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.76 E-value=1.2e-08 Score=83.10 Aligned_cols=62 Identities=21% Similarity=0.389 Sum_probs=53.5
Q ss_pred HHHHHHHhhcCC-CC-CCcccHHHHhhhhcC-----cC------cHHHHHHHhCCCCCCcccHHHHHHHHhhccc
Q 008127 498 LRSQAAFEKFDI-DR-DGFITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTASI 559 (577)
Q Consensus 498 ~~~~~~F~~~D~-d~-~G~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~~ 559 (577)
..++.+|+.||. |+ +|+|+.+||+.++.. ++ +++.+++.+|.|+||.|+|+||+.+|...++
T Consensus 8 ~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~~ 82 (94)
T cd05031 8 ESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGLSI 82 (94)
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence 467889999997 97 799999999998864 22 4899999999999999999999999986553
No 494
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.76 E-value=1.3e-08 Score=81.20 Aligned_cols=70 Identities=20% Similarity=0.311 Sum_probs=59.3
Q ss_pred hHHHhhhcccccc-ccCCCCC-CCCHHHHHHHHHhhC----CCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 415 DEELADLRDQFDA-IDVDKNG-SISLEEMRQALAKDL----PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 415 ~~~~~~l~~~F~~-~D~d~dG-~i~~~el~~~l~~~~----~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
+..+..|..+|+. +|.|++| +|+.+||+.++...+ +....+.+++.+++.+|.|+||.|+|+||+.++..
T Consensus 5 e~~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~ 80 (89)
T cd05023 5 ERCIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGG 80 (89)
T ss_pred HHHHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 3457788999999 8899987 999999999997754 33455789999999999999999999999987654
No 495
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.73 E-value=2.3e-08 Score=81.01 Aligned_cols=60 Identities=20% Similarity=0.350 Sum_probs=52.6
Q ss_pred HHHHHHHhhcC-CCCCCc-ccHHHHhhhhcC-cC----------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 498 LRSQAAFEKFD-IDRDGF-ITPEELRMHTGL-KG----------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 498 ~~~~~~F~~~D-~d~~G~-I~~~El~~~l~~-~~----------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
..++++|+.|| +|++|+ |+.+||+.++.. .+ +++++|+.+|.|++|.|+|+||+.++...
T Consensus 9 ~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~ 81 (92)
T cd05025 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (92)
T ss_pred HHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 46888999997 999995 999999999964 21 48999999999999999999999998753
No 496
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.71 E-value=3.8e-08 Score=82.34 Aligned_cols=60 Identities=30% Similarity=0.350 Sum_probs=51.5
Q ss_pred HHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc--CcHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 496 WHLRSQAAFEKFDIDRDGFITPEELRMHTGLK--GSIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 496 ~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~--~~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
+...+..+|..+|+|+||+|+.+||..+.... ..+..+|..+|.|+||.||++||+..+.
T Consensus 46 ~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~ 107 (116)
T cd00252 46 CKDPVGWMFNQLDGNYDGKLSHHELAPIRLDPNEHCIKPFFESCDLDKDGSISLDEWCYCFI 107 (116)
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHHccchHHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence 34578889999999999999999999876222 1378899999999999999999999883
No 497
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.70 E-value=2.4e-08 Score=75.68 Aligned_cols=57 Identities=32% Similarity=0.529 Sum_probs=51.1
Q ss_pred HHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 501 QAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 501 ~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
+++|+.+|+|++|.|+.+|++.++...+ ++..+++.+|.+++|.|+|+||+.++...
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGLPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 3589999999999999999999887665 48899999999999999999999988653
No 498
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=98.70 E-value=5.7e-08 Score=82.98 Aligned_cols=102 Identities=16% Similarity=0.243 Sum_probs=84.0
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~ 498 (577)
.++.++-..+|+++.|+|+.++|...+...++...+.+++...|+.+|.|++|.|++.+|..++... -+.-.. .
T Consensus 69 ~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeL---genltD---~ 142 (172)
T KOG0028|consen 69 EEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDTKEEIKKAFRLFDDDKTGKISQRNLKRVAKEL---GENLTD---E 142 (172)
T ss_pred HHHHHHHHhhhhccCceechHHHHHHHHHHHhccCcHHHHHHHHHcccccCCCCcCHHHHHHHHHHh---CccccH---H
Confidence 4566677788999999999999999988888888899999999999999999999999999766433 222221 2
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcC
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGL 526 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~ 526 (577)
.+.+.-.-+|.|++|-|+.+||..+++.
T Consensus 143 El~eMIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 143 ELMEMIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred HHHHHHHHhcccccccccHHHHHHHHhc
Confidence 5666778899999999999999887753
No 499
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.69 E-value=3.8e-08 Score=80.45 Aligned_cols=62 Identities=23% Similarity=0.342 Sum_probs=55.0
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 497 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
...++.+|+.||+|++|.|+.+|++.++...+ ++..++..+|.+++|.|+|+||+.+|....
T Consensus 9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~ 74 (96)
T smart00027 9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLKSGLPQTLLAKIWNLADIDNDGELDKDEFALAMHLIY 74 (96)
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence 34688899999999999999999999987665 589999999999999999999999887533
No 500
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.69 E-value=3.6e-08 Score=71.18 Aligned_cols=51 Identities=37% Similarity=0.629 Sum_probs=47.4
Q ss_pred CCCCCCHHHHHHHHHhhCCCC-ccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 432 KNGSISLEEMRQALAKDLPWK-LKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 432 ~dG~i~~~el~~~l~~~~~~~-~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
.+|.|+.+||..+| ..+|.. +++.++..+|..+|.|++|.|+|+||+.++.
T Consensus 1 ~~G~i~~~~~~~~l-~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 1 KDGKITREEFRRAL-SKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ 52 (54)
T ss_dssp SSSEEEHHHHHHHH-HHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred CcCEECHHHHHHHH-HHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence 47999999999999 668999 9999999999999999999999999998764
Done!