Query 008128
Match_columns 577
No_of_seqs 299 out of 1657
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 18:47:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008128.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008128hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fcc_A Glutamate dehydrogenase 100.0 2E-120 6E-125 975.1 39.9 380 191-571 8-390 (450)
2 3r3j_A Glutamate dehydrogenase 100.0 8E-120 3E-124 969.8 39.0 382 190-571 13-395 (456)
3 2bma_A Glutamate dehydrogenase 100.0 4E-118 1E-122 961.0 40.3 383 189-571 25-408 (470)
4 1bgv_A Glutamate dehydrogenase 100.0 4E-113 1E-117 920.2 37.2 378 192-570 3-386 (449)
5 3k92_A NAD-GDH, NAD-specific g 100.0 2E-110 6E-115 893.6 32.8 350 208-571 15-365 (424)
6 3mw9_A GDH 1, glutamate dehydr 100.0 1E-109 4E-114 897.9 37.9 360 205-575 4-392 (501)
7 3aog_A Glutamate dehydrogenase 100.0 6E-109 2E-113 885.7 34.9 352 207-571 28-380 (440)
8 3aoe_E Glutamate dehydrogenase 100.0 4E-108 1E-112 875.5 32.8 348 205-569 9-357 (419)
9 2yfq_A Padgh, NAD-GDH, NAD-spe 100.0 2E-107 7E-112 871.3 31.5 348 209-569 6-360 (421)
10 2tmg_A Protein (glutamate dehy 100.0 2E-105 7E-110 854.1 35.9 350 207-569 2-353 (415)
11 1v9l_A Glutamate dehydrogenase 100.0 3E-106 1E-110 861.4 29.0 352 207-571 3-361 (421)
12 1gtm_A Glutamate dehydrogenase 100.0 1.9E-93 6.6E-98 763.8 31.4 351 207-570 2-357 (419)
13 1c1d_A L-phenylalanine dehydro 100.0 8.1E-77 2.8E-81 623.5 24.7 287 239-571 8-303 (355)
14 1leh_A Leucine dehydrogenase; 100.0 1E-73 3.5E-78 601.8 20.0 285 239-571 10-301 (364)
15 3ing_A Homoserine dehydrogenas 97.8 5E-05 1.7E-09 78.8 8.5 122 416-551 4-140 (325)
16 1vl6_A Malate oxidoreductase; 97.6 0.00043 1.5E-08 73.6 12.9 116 401-535 177-297 (388)
17 3d4o_A Dipicolinate synthase s 97.3 0.0019 6.4E-08 65.1 13.0 121 405-554 144-268 (293)
18 3n58_A Adenosylhomocysteinase; 97.2 0.0015 5.1E-08 70.8 11.2 98 408-534 239-337 (464)
19 2o4c_A Erythronate-4-phosphate 97.2 0.0011 3.7E-08 70.3 9.6 157 348-551 62-229 (380)
20 2d5c_A AROE, shikimate 5-dehyd 97.1 0.0043 1.5E-07 61.2 12.4 130 406-565 107-240 (263)
21 2rir_A Dipicolinate synthase, 97.0 0.0032 1.1E-07 63.5 11.3 123 407-558 148-274 (300)
22 1mx3_A CTBP1, C-terminal bindi 97.0 0.0034 1.1E-07 65.5 11.4 108 412-549 164-279 (347)
23 3l07_A Bifunctional protein fo 97.0 0.0076 2.6E-07 61.6 13.3 53 391-448 140-193 (285)
24 3do5_A HOM, homoserine dehydro 97.0 0.0016 5.3E-08 67.6 8.3 120 417-551 3-138 (327)
25 3p2o_A Bifunctional protein fo 96.9 0.0088 3E-07 61.2 13.2 53 391-448 139-192 (285)
26 4a26_A Putative C-1-tetrahydro 96.9 0.0089 3E-07 61.5 13.0 54 390-448 143-197 (300)
27 3gvp_A Adenosylhomocysteinase 96.8 0.0054 1.9E-07 66.1 11.2 110 397-535 200-311 (435)
28 1b0a_A Protein (fold bifunctio 96.8 0.013 4.3E-07 60.1 12.9 53 391-448 138-191 (288)
29 3h9u_A Adenosylhomocysteinase; 96.7 0.0069 2.4E-07 65.3 10.9 103 408-539 203-308 (436)
30 2a9f_A Putative malic enzyme ( 96.7 0.008 2.7E-07 64.1 11.2 122 393-532 163-290 (398)
31 2hk9_A Shikimate dehydrogenase 96.6 0.01 3.6E-07 59.1 11.2 145 393-570 110-258 (275)
32 1nyt_A Shikimate 5-dehydrogena 96.6 0.04 1.4E-06 54.8 15.3 133 395-554 102-238 (271)
33 4a5o_A Bifunctional protein fo 96.6 0.017 5.8E-07 59.1 12.6 53 391-448 140-193 (286)
34 1a4i_A Methylenetetrahydrofola 96.6 0.018 6.2E-07 59.3 12.6 53 391-448 144-197 (301)
35 4e5n_A Thermostable phosphite 96.5 0.007 2.4E-07 62.6 9.0 110 411-549 140-256 (330)
36 3jtm_A Formate dehydrogenase, 96.5 0.014 4.9E-07 61.0 11.3 110 411-549 159-276 (351)
37 2ekl_A D-3-phosphoglycerate de 96.4 0.0087 3E-07 61.3 9.4 37 411-448 137-173 (313)
38 2c2x_A Methylenetetrahydrofola 96.4 0.02 6.9E-07 58.4 12.0 53 391-448 137-192 (281)
39 3gvx_A Glycerate dehydrogenase 96.4 0.0089 3E-07 60.9 9.3 105 412-549 118-229 (290)
40 3c8m_A Homoserine dehydrogenas 96.4 0.0041 1.4E-07 64.2 6.9 124 417-552 7-145 (331)
41 2j6i_A Formate dehydrogenase; 96.4 0.009 3.1E-07 62.6 9.6 110 411-549 159-277 (364)
42 3o8q_A Shikimate 5-dehydrogena 96.4 0.033 1.1E-06 56.3 13.1 131 396-554 110-245 (281)
43 2pi1_A D-lactate dehydrogenase 96.3 0.0055 1.9E-07 63.5 7.2 108 411-549 136-250 (334)
44 3oet_A Erythronate-4-phosphate 96.3 0.013 4.3E-07 62.2 10.0 52 394-445 97-148 (381)
45 1xdw_A NAD+-dependent (R)-2-hy 96.3 0.012 4.1E-07 60.7 9.5 37 411-448 141-177 (331)
46 2gcg_A Glyoxylate reductase/hy 96.3 0.0061 2.1E-07 62.7 7.3 108 412-548 151-265 (330)
47 1p77_A Shikimate 5-dehydrogena 96.3 0.036 1.2E-06 55.2 12.7 128 396-554 103-239 (272)
48 2w2k_A D-mandelate dehydrogena 96.2 0.018 6.3E-07 59.7 10.6 111 410-549 157-276 (348)
49 3pwz_A Shikimate dehydrogenase 96.2 0.063 2.2E-06 54.0 14.2 132 396-554 103-239 (272)
50 3ngx_A Bifunctional protein fo 96.2 0.035 1.2E-06 56.5 12.0 51 391-448 131-182 (276)
51 1wwk_A Phosphoglycerate dehydr 96.2 0.0091 3.1E-07 61.0 7.8 108 411-548 137-251 (307)
52 1u8f_O GAPDH, glyceraldehyde-3 96.2 0.02 7E-07 59.3 10.4 106 417-531 4-124 (335)
53 3g0o_A 3-hydroxyisobutyrate de 96.1 0.028 9.5E-07 56.4 10.5 109 416-552 7-125 (303)
54 1dxy_A D-2-hydroxyisocaproate 96.0 0.026 9E-07 58.3 10.5 35 411-445 140-174 (333)
55 2g76_A 3-PGDH, D-3-phosphoglyc 96.0 0.016 5.4E-07 60.1 8.7 34 411-444 160-193 (335)
56 3jyo_A Quinate/shikimate dehyd 96.0 0.07 2.4E-06 54.0 13.3 134 396-554 111-252 (283)
57 4g2n_A D-isomer specific 2-hyd 96.0 0.029 9.9E-07 58.5 10.7 108 411-549 168-283 (345)
58 2egg_A AROE, shikimate 5-dehyd 96.0 0.047 1.6E-06 55.3 11.9 135 395-556 123-265 (297)
59 2d0i_A Dehydrogenase; structur 96.0 0.014 4.7E-07 60.3 8.1 106 412-548 142-254 (333)
60 3tnl_A Shikimate dehydrogenase 96.0 0.098 3.4E-06 53.9 14.4 138 395-554 137-286 (315)
61 3evt_A Phosphoglycerate dehydr 95.9 0.028 9.5E-07 58.1 10.1 35 411-445 132-166 (324)
62 1gq2_A Malic enzyme; oxidoredu 95.9 0.025 8.6E-07 62.4 10.2 178 322-532 204-396 (555)
63 4e21_A 6-phosphogluconate dehy 95.9 0.02 7E-07 59.7 8.8 112 414-553 20-139 (358)
64 1o0s_A NAD-ME, NAD-dependent m 95.9 0.026 9E-07 62.7 10.0 178 322-532 242-434 (605)
65 2nac_A NAD-dependent formate d 95.9 0.036 1.2E-06 58.9 10.8 109 411-548 186-302 (393)
66 2g1u_A Hypothetical protein TM 95.8 0.056 1.9E-06 48.6 10.5 39 409-448 12-50 (155)
67 3uuw_A Putative oxidoreductase 95.8 0.013 4.4E-07 58.7 6.8 113 415-553 5-123 (308)
68 2yq5_A D-isomer specific 2-hyd 95.8 0.026 8.8E-07 58.9 9.3 35 411-445 143-177 (343)
69 3fbt_A Chorismate mutase and s 95.8 0.079 2.7E-06 53.7 12.5 126 396-554 106-237 (282)
70 3tum_A Shikimate dehydrogenase 95.7 0.27 9.2E-06 49.5 16.1 132 396-554 109-248 (269)
71 3e5r_O PP38, glyceraldehyde-3- 95.7 0.025 8.7E-07 58.8 8.8 106 417-531 4-126 (337)
72 2i99_A MU-crystallin homolog; 95.7 0.042 1.4E-06 55.9 10.2 115 413-554 132-250 (312)
73 2ho3_A Oxidoreductase, GFO/IDH 95.7 0.019 6.4E-07 58.0 7.6 111 417-552 2-118 (325)
74 3gg9_A D-3-phosphoglycerate de 95.7 0.024 8.1E-07 59.3 8.5 108 411-548 155-270 (352)
75 3l6d_A Putative oxidoreductase 95.7 0.038 1.3E-06 55.7 9.8 114 412-553 5-125 (306)
76 3c85_A Putative glutathione-re 95.7 0.049 1.7E-06 50.1 9.6 117 411-554 34-161 (183)
77 2glx_A 1,5-anhydro-D-fructose 95.6 0.021 7.3E-07 57.4 7.6 112 417-552 1-118 (332)
78 3d64_A Adenosylhomocysteinase; 95.6 0.027 9.1E-07 61.6 8.8 107 409-544 270-379 (494)
79 3pef_A 6-phosphogluconate dehy 95.6 0.026 8.7E-07 56.0 7.9 109 417-552 2-118 (287)
80 1obf_O Glyceraldehyde 3-phosph 95.6 0.023 7.8E-07 59.3 7.8 102 417-529 2-122 (335)
81 1lss_A TRK system potassium up 95.6 0.087 3E-06 45.3 10.3 32 416-448 4-35 (140)
82 3ezy_A Dehydrogenase; structur 95.5 0.014 4.8E-07 59.4 6.0 113 417-553 3-121 (344)
83 3qy9_A DHPR, dihydrodipicolina 95.5 0.032 1.1E-06 55.5 8.4 102 417-555 4-110 (243)
84 1qp8_A Formate dehydrogenase; 95.5 0.064 2.2E-06 54.7 10.8 35 413-448 121-155 (303)
85 3ce6_A Adenosylhomocysteinase; 95.5 0.06 2.1E-06 58.8 11.2 92 411-530 269-361 (494)
86 2ejw_A HDH, homoserine dehydro 95.5 0.026 8.7E-07 58.7 7.9 83 417-528 4-96 (332)
87 1ygy_A PGDH, D-3-phosphoglycer 95.5 0.042 1.4E-06 60.1 10.0 108 411-548 137-251 (529)
88 3ond_A Adenosylhomocysteinase; 95.5 0.091 3.1E-06 57.4 12.5 97 408-533 257-354 (488)
89 1ebf_A Homoserine dehydrogenas 95.5 0.018 6.3E-07 60.2 6.8 119 417-551 5-140 (358)
90 4hkt_A Inositol 2-dehydrogenas 95.5 0.056 1.9E-06 54.6 10.1 112 417-553 4-120 (331)
91 4hy3_A Phosphoglycerate oxidor 95.5 0.049 1.7E-06 57.3 10.0 108 411-548 171-285 (365)
92 2h78_A Hibadh, 3-hydroxyisobut 95.5 0.039 1.3E-06 54.9 8.8 116 417-561 4-127 (302)
93 4dll_A 2-hydroxy-3-oxopropiona 95.5 0.038 1.3E-06 56.1 8.8 112 414-552 29-147 (320)
94 3llv_A Exopolyphosphatase-rela 95.5 0.058 2E-06 47.3 9.0 113 415-555 5-126 (141)
95 3doj_A AT3G25530, dehydrogenas 95.4 0.046 1.6E-06 55.1 9.3 112 414-552 19-138 (310)
96 1pj3_A NAD-dependent malic enz 95.4 0.082 2.8E-06 58.5 11.9 178 322-532 206-401 (564)
97 3t4e_A Quinate/shikimate dehyd 95.4 0.17 5.9E-06 52.0 13.7 137 396-554 132-280 (312)
98 1dih_A Dihydrodipicolinate red 95.4 0.03 1E-06 56.4 7.9 119 415-554 4-129 (273)
99 1v8b_A Adenosylhomocysteinase; 95.4 0.051 1.7E-06 59.2 10.2 97 410-535 251-348 (479)
100 1tlt_A Putative oxidoreductase 95.4 0.017 5.8E-07 58.1 6.0 112 416-553 5-122 (319)
101 3oa2_A WBPB; oxidoreductase, s 95.4 0.027 9.1E-07 57.3 7.5 111 417-552 4-129 (318)
102 3b1j_A Glyceraldehyde 3-phosph 95.4 0.052 1.8E-06 56.5 9.8 99 417-525 3-117 (339)
103 3e18_A Oxidoreductase; dehydro 95.4 0.021 7.1E-07 58.9 6.7 111 415-551 4-120 (359)
104 3pdu_A 3-hydroxyisobutyrate de 95.4 0.029 9.8E-07 55.7 7.4 109 417-552 2-118 (287)
105 2dbq_A Glyoxylate reductase; D 95.4 0.053 1.8E-06 55.8 9.7 108 411-548 145-259 (334)
106 4had_A Probable oxidoreductase 95.4 0.033 1.1E-06 56.5 8.0 113 417-553 24-143 (350)
107 3ba1_A HPPR, hydroxyphenylpyru 95.3 0.065 2.2E-06 55.4 10.1 105 411-549 159-271 (333)
108 1gdh_A D-glycerate dehydrogena 95.3 0.054 1.9E-06 55.5 9.4 110 411-549 141-258 (320)
109 3h9e_O Glyceraldehyde-3-phosph 95.3 0.061 2.1E-06 56.4 9.8 104 417-530 8-126 (346)
110 3euw_A MYO-inositol dehydrogen 95.3 0.043 1.5E-06 55.7 8.6 111 417-553 5-122 (344)
111 2dc1_A L-aspartate dehydrogena 95.3 0.031 1.1E-06 54.1 7.2 101 417-550 1-105 (236)
112 3fwz_A Inner membrane protein 95.3 0.12 4.1E-06 45.8 10.5 112 417-555 8-128 (140)
113 2x5j_O E4PDH, D-erythrose-4-ph 95.2 0.064 2.2E-06 55.8 9.9 103 417-529 3-123 (339)
114 3e82_A Putative oxidoreductase 95.2 0.031 1E-06 57.7 7.4 111 416-553 7-124 (364)
115 3hg7_A D-isomer specific 2-hyd 95.2 0.039 1.3E-06 57.1 8.2 35 411-445 135-169 (324)
116 3evn_A Oxidoreductase, GFO/IDH 95.2 0.055 1.9E-06 54.8 9.1 113 415-551 4-122 (329)
117 2ep7_A GAPDH, glyceraldehyde-3 95.2 0.04 1.4E-06 57.6 8.3 104 417-530 3-121 (342)
118 1sc6_A PGDH, D-3-phosphoglycer 95.2 0.081 2.8E-06 56.2 10.8 37 411-448 140-176 (404)
119 2d2i_A Glyceraldehyde 3-phosph 95.2 0.061 2.1E-06 57.0 9.7 99 417-525 3-117 (380)
120 4fb5_A Probable oxidoreductase 95.2 0.041 1.4E-06 55.9 8.1 115 414-552 23-150 (393)
121 3pp8_A Glyoxylate/hydroxypyruv 95.2 0.1 3.4E-06 53.7 11.0 36 412-447 135-170 (315)
122 1edz_A 5,10-methylenetetrahydr 95.2 0.031 1.1E-06 58.0 7.2 59 390-449 146-210 (320)
123 1nvt_A Shikimate 5'-dehydrogen 95.2 0.14 4.9E-06 51.1 11.9 138 393-554 109-253 (287)
124 3d1l_A Putative NADP oxidoredu 95.2 0.068 2.3E-06 52.1 9.3 99 411-535 5-106 (266)
125 3e9m_A Oxidoreductase, GFO/IDH 95.2 0.052 1.8E-06 55.1 8.7 117 415-554 4-125 (330)
126 3kux_A Putative oxidoreductase 95.2 0.074 2.5E-06 54.4 9.9 110 417-553 8-124 (352)
127 3phh_A Shikimate dehydrogenase 95.1 0.15 5.1E-06 51.5 11.9 122 395-554 105-231 (269)
128 2dvm_A Malic enzyme, 439AA lon 95.1 0.081 2.8E-06 57.1 10.5 135 401-551 171-315 (439)
129 2p2s_A Putative oxidoreductase 95.1 0.051 1.7E-06 55.0 8.5 109 416-551 4-121 (336)
130 3gdo_A Uncharacterized oxidore 95.1 0.025 8.4E-07 58.2 6.3 110 416-552 5-121 (358)
131 3o9z_A Lipopolysaccaride biosy 95.1 0.08 2.7E-06 53.6 10.0 110 417-551 4-127 (312)
132 3don_A Shikimate dehydrogenase 95.1 0.033 1.1E-06 56.3 7.1 129 395-554 100-233 (277)
133 1y81_A Conserved hypothetical 95.1 0.098 3.4E-06 47.3 9.5 115 414-564 12-130 (138)
134 2cuk_A Glycerate dehydrogenase 95.1 0.076 2.6E-06 54.3 9.8 37 411-448 139-175 (311)
135 3cps_A Glyceraldehyde 3-phosph 95.1 0.066 2.3E-06 56.2 9.4 105 417-530 18-137 (354)
136 1xea_A Oxidoreductase, GFO/IDH 95.1 0.05 1.7E-06 54.8 8.2 111 417-552 3-119 (323)
137 3q2i_A Dehydrogenase; rossmann 95.1 0.067 2.3E-06 54.6 9.2 111 416-552 13-131 (354)
138 4gbj_A 6-phosphogluconate dehy 95.0 0.083 2.8E-06 53.4 9.8 108 417-552 6-120 (297)
139 1rm4_O Glyceraldehyde 3-phosph 95.0 0.1 3.6E-06 54.3 10.7 106 417-532 2-124 (337)
140 3u3x_A Oxidoreductase; structu 95.0 0.04 1.4E-06 56.8 7.6 114 416-553 26-145 (361)
141 3k5p_A D-3-phosphoglycerate de 95.0 0.098 3.4E-06 56.0 10.7 106 411-549 151-264 (416)
142 4b4u_A Bifunctional protein fo 95.0 0.41 1.4E-05 49.3 14.9 53 391-448 158-211 (303)
143 3m2t_A Probable dehydrogenase; 95.0 0.05 1.7E-06 56.0 8.1 114 415-552 4-124 (359)
144 3db2_A Putative NADPH-dependen 95.0 0.073 2.5E-06 54.3 9.2 114 416-553 5-123 (354)
145 4dgs_A Dehydrogenase; structur 94.9 0.063 2.2E-06 55.9 8.7 37 411-448 166-202 (340)
146 2d59_A Hypothetical protein PH 94.9 0.18 6.3E-06 45.6 10.8 104 416-552 22-130 (144)
147 3rc1_A Sugar 3-ketoreductase; 94.9 0.089 3.1E-06 53.9 9.6 115 415-553 26-146 (350)
148 2g82_O GAPDH, glyceraldehyde-3 94.9 0.066 2.3E-06 55.6 8.6 102 417-528 1-116 (331)
149 3cea_A MYO-inositol 2-dehydrog 94.9 0.082 2.8E-06 53.4 9.2 113 416-553 8-129 (346)
150 3qha_A Putative oxidoreductase 94.8 0.031 1E-06 56.1 5.8 106 417-551 16-127 (296)
151 1omo_A Alanine dehydrogenase; 94.8 0.13 4.3E-06 52.7 10.5 113 414-552 123-239 (322)
152 4f3y_A DHPR, dihydrodipicolina 94.8 0.038 1.3E-06 55.8 6.4 117 417-555 8-131 (272)
153 3fhl_A Putative oxidoreductase 94.7 0.075 2.6E-06 54.6 8.7 112 415-553 4-122 (362)
154 3obb_A Probable 3-hydroxyisobu 94.7 0.083 2.8E-06 53.7 8.8 109 417-551 4-119 (300)
155 2yyy_A Glyceraldehyde-3-phosph 94.7 0.032 1.1E-06 58.1 5.9 102 417-530 3-113 (343)
156 3ohs_X Trans-1,2-dihydrobenzen 94.7 0.053 1.8E-06 54.9 7.2 111 417-553 3-123 (334)
157 4gwg_A 6-phosphogluconate dehy 94.6 0.073 2.5E-06 57.9 8.7 116 416-552 4-126 (484)
158 3hja_A GAPDH, glyceraldehyde-3 94.6 0.067 2.3E-06 56.2 8.0 103 416-529 21-143 (356)
159 1gad_O D-glyceraldehyde-3-phos 94.6 0.11 3.7E-06 53.9 9.5 105 417-531 2-120 (330)
160 1ff9_A Saccharopine reductase; 94.6 0.041 1.4E-06 59.0 6.4 116 415-556 2-125 (450)
161 4gqa_A NAD binding oxidoreduct 94.5 0.1 3.5E-06 54.4 9.2 112 417-552 27-152 (412)
162 1ydw_A AX110P-like protein; st 94.5 0.056 1.9E-06 55.4 7.0 113 417-551 7-126 (362)
163 3p2y_A Alanine dehydrogenase/p 94.5 0.18 6E-06 53.5 10.8 35 413-448 181-215 (381)
164 4dio_A NAD(P) transhydrogenase 94.4 0.2 6.9E-06 53.4 11.3 35 413-448 187-221 (405)
165 3abi_A Putative uncharacterize 94.4 0.057 2E-06 55.7 6.8 120 411-555 9-133 (365)
166 3dfz_A SIRC, precorrin-2 dehyd 94.3 0.1 3.4E-06 51.4 8.1 35 412-446 27-61 (223)
167 1x7d_A Ornithine cyclodeaminas 94.3 0.12 4E-06 53.8 9.1 114 414-552 127-248 (350)
168 3ic5_A Putative saccharopine d 94.3 0.095 3.2E-06 43.7 6.9 33 415-448 4-37 (118)
169 1hdg_O Holo-D-glyceraldehyde-3 94.3 0.17 5.7E-06 52.6 10.0 104 417-530 1-121 (332)
170 3keo_A Redox-sensing transcrip 94.3 0.036 1.2E-06 54.3 4.7 173 321-536 6-185 (212)
171 3ijp_A DHPR, dihydrodipicolina 94.3 0.098 3.4E-06 53.4 8.1 118 417-555 22-146 (288)
172 2zyd_A 6-phosphogluconate dehy 94.2 0.14 4.9E-06 55.3 9.6 118 413-552 12-136 (480)
173 3mtj_A Homoserine dehydrogenas 94.1 0.11 3.8E-06 56.0 8.6 110 415-551 9-133 (444)
174 2b4r_O Glyceraldehyde-3-phosph 94.1 0.14 4.9E-06 53.5 9.1 108 413-529 8-130 (345)
175 3bio_A Oxidoreductase, GFO/IDH 94.1 0.076 2.6E-06 53.7 6.9 109 416-553 9-123 (304)
176 1p9l_A Dihydrodipicolinate red 94.1 0.19 6.5E-06 50.0 9.6 96 417-554 1-105 (245)
177 2axq_A Saccharopine dehydrogen 94.1 0.11 3.9E-06 56.0 8.6 126 409-558 16-147 (467)
178 2ozp_A N-acetyl-gamma-glutamyl 94.1 0.23 7.9E-06 51.5 10.6 96 417-533 5-102 (345)
179 2ixa_A Alpha-N-acetylgalactosa 94.1 0.13 4.5E-06 54.4 8.9 115 415-551 19-146 (444)
180 3doc_A Glyceraldehyde 3-phosph 94.0 0.15 5.2E-06 53.2 9.1 101 417-527 3-119 (335)
181 1b7g_O Protein (glyceraldehyde 94.0 0.1 3.5E-06 54.1 7.7 100 417-532 2-110 (340)
182 2duw_A Putative COA-binding pr 93.9 0.43 1.5E-05 43.2 10.8 103 416-551 13-121 (145)
183 3cmc_O GAPDH, glyceraldehyde-3 93.9 0.13 4.3E-06 53.5 8.1 104 417-530 2-120 (334)
184 1f06_A MESO-diaminopimelate D- 93.8 0.11 3.6E-06 53.1 7.4 94 416-539 3-98 (320)
185 3b1f_A Putative prephenate deh 93.8 0.22 7.6E-06 49.0 9.5 111 417-553 7-125 (290)
186 3mz0_A Inositol 2-dehydrogenas 93.8 0.19 6.4E-06 51.1 9.2 111 417-550 3-120 (344)
187 3pid_A UDP-glucose 6-dehydroge 93.8 0.16 5.5E-06 54.5 9.1 134 410-560 30-183 (432)
188 1xyg_A Putative N-acetyl-gamma 93.8 0.2 6.9E-06 52.3 9.5 99 415-533 15-115 (359)
189 3pym_A GAPDH 3, glyceraldehyde 93.8 0.28 9.6E-06 51.1 10.4 103 417-528 2-118 (332)
190 1npy_A Hypothetical shikimate 93.8 0.92 3.1E-05 45.4 14.0 131 392-555 100-237 (271)
191 3i23_A Oxidoreductase, GFO/IDH 93.7 0.11 3.7E-06 53.1 7.3 113 417-553 3-122 (349)
192 1h6d_A Precursor form of gluco 93.7 0.091 3.1E-06 55.7 6.9 114 416-552 83-206 (433)
193 3c1a_A Putative oxidoreductase 93.7 0.062 2.1E-06 54.0 5.2 109 417-553 11-126 (315)
194 3kb6_A D-lactate dehydrogenase 93.7 0.07 2.4E-06 55.2 5.7 35 411-445 136-170 (334)
195 3ec7_A Putative dehydrogenase; 93.6 0.095 3.2E-06 53.9 6.6 113 414-549 21-140 (357)
196 2z2v_A Hypothetical protein PH 93.6 0.08 2.7E-06 55.2 6.1 118 413-558 13-136 (365)
197 3qsg_A NAD-binding phosphogluc 93.6 0.14 4.7E-06 51.8 7.6 113 416-553 24-143 (312)
198 1nvm_B Acetaldehyde dehydrogen 93.5 0.052 1.8E-06 55.6 4.4 92 416-530 4-104 (312)
199 3f4l_A Putative oxidoreductase 93.4 0.071 2.4E-06 54.3 5.2 108 417-552 3-121 (345)
200 2cvz_A Dehydrogenase, 3-hydrox 93.4 0.3 1E-05 47.7 9.5 107 417-552 2-113 (289)
201 1zh8_A Oxidoreductase; TM0312, 93.3 0.33 1.1E-05 49.4 10.1 113 415-551 17-137 (340)
202 2czc_A Glyceraldehyde-3-phosph 93.3 0.063 2.1E-06 55.3 4.7 99 417-532 3-112 (334)
203 3upl_A Oxidoreductase; rossman 93.3 0.08 2.7E-06 57.2 5.7 126 415-555 22-166 (446)
204 3lvf_P GAPDH 1, glyceraldehyde 93.3 0.25 8.5E-06 51.6 9.2 102 417-529 5-122 (338)
205 3cky_A 2-hydroxymethyl glutara 93.3 0.18 6.3E-06 49.7 7.9 107 417-551 5-120 (301)
206 4h3v_A Oxidoreductase domain p 93.3 0.27 9.2E-06 49.8 9.3 115 415-553 5-135 (390)
207 1pgj_A 6PGDH, 6-PGDH, 6-phosph 93.2 0.23 7.7E-06 53.6 9.0 117 417-552 2-126 (478)
208 2iz1_A 6-phosphogluconate dehy 93.2 0.19 6.5E-06 54.1 8.3 113 417-552 6-126 (474)
209 1cf2_P Protein (glyceraldehyde 93.1 0.048 1.6E-06 56.5 3.5 104 417-532 2-111 (337)
210 4ew6_A D-galactose-1-dehydroge 93.1 0.1 3.6E-06 53.1 5.9 36 414-449 23-60 (330)
211 4dib_A GAPDH, glyceraldehyde 3 93.1 0.2 6.8E-06 52.5 8.0 101 417-527 5-119 (345)
212 1kyq_A Met8P, siroheme biosynt 93.0 0.082 2.8E-06 53.5 4.9 36 412-447 9-44 (274)
213 3nv9_A Malic enzyme; rossmann 93.0 0.2 6.8E-06 54.5 8.1 175 328-533 149-329 (487)
214 3u62_A Shikimate dehydrogenase 93.0 0.18 6.3E-06 50.0 7.3 123 396-558 95-226 (253)
215 1lu9_A Methylene tetrahydromet 92.8 0.18 6E-06 50.2 7.0 51 394-448 100-151 (287)
216 4ezb_A Uncharacterized conserv 92.8 0.37 1.3E-05 48.9 9.4 114 417-553 25-145 (317)
217 1j5p_A Aspartate dehydrogenase 92.7 0.27 9.3E-06 49.4 8.1 79 416-530 12-91 (253)
218 3moi_A Probable dehydrogenase; 92.6 0.16 5.6E-06 52.6 6.7 110 417-551 3-119 (387)
219 4huj_A Uncharacterized protein 92.6 0.25 8.5E-06 47.2 7.5 93 417-534 24-116 (220)
220 3l4b_C TRKA K+ channel protien 92.6 0.67 2.3E-05 43.7 10.4 112 417-553 1-120 (218)
221 2pgd_A 6-phosphogluconate dehy 92.5 0.27 9.3E-06 53.0 8.5 113 417-551 3-123 (482)
222 3v1y_O PP38, glyceraldehyde-3- 92.5 0.37 1.3E-05 50.4 9.1 102 417-527 4-121 (337)
223 1iuk_A Hypothetical protein TT 92.5 0.37 1.3E-05 43.5 8.0 30 416-445 13-46 (140)
224 2nu8_A Succinyl-COA ligase [AD 92.5 0.4 1.4E-05 48.4 9.2 111 416-554 7-123 (288)
225 2p4q_A 6-phosphogluconate dehy 92.4 0.26 8.8E-06 53.6 8.1 114 416-551 10-131 (497)
226 1yqg_A Pyrroline-5-carboxylate 92.4 0.65 2.2E-05 44.8 10.2 99 417-544 1-101 (263)
227 2vt3_A REX, redox-sensing tran 92.2 0.13 4.6E-06 50.1 5.1 111 319-448 5-119 (215)
228 1vpd_A Tartronate semialdehyde 92.2 0.35 1.2E-05 47.6 8.2 107 417-551 6-121 (299)
229 3two_A Mannitol dehydrogenase; 91.9 0.91 3.1E-05 46.0 11.0 113 414-552 175-290 (348)
230 2hmt_A YUAA protein; RCK, KTN, 91.8 0.14 4.6E-06 44.1 4.2 32 414-445 4-35 (144)
231 1l7d_A Nicotinamide nucleotide 91.8 0.25 8.6E-06 51.6 6.9 35 413-448 169-203 (384)
232 3oj0_A Glutr, glutamyl-tRNA re 91.8 0.096 3.3E-06 46.5 3.2 32 416-448 21-52 (144)
233 3btv_A Galactose/lactose metab 91.7 0.17 5.9E-06 53.6 5.7 115 416-553 20-152 (438)
234 4ina_A Saccharopine dehydrogen 91.7 0.25 8.6E-06 52.0 6.9 125 417-559 2-145 (405)
235 1j4a_A D-LDH, D-lactate dehydr 91.4 0.15 5.1E-06 52.5 4.6 34 411-444 141-174 (333)
236 1bg6_A N-(1-D-carboxylethyl)-L 91.4 1 3.4E-05 45.3 10.7 112 417-547 5-126 (359)
237 3l9w_A Glutathione-regulated p 91.4 0.49 1.7E-05 50.2 8.7 106 416-548 4-116 (413)
238 1oi7_A Succinyl-COA synthetase 91.2 0.5 1.7E-05 47.8 8.2 117 416-564 7-129 (288)
239 1id1_A Putative potassium chan 91.1 0.24 8.2E-06 44.2 5.1 107 415-548 2-119 (153)
240 2uyy_A N-PAC protein; long-cha 91.0 0.56 1.9E-05 46.8 8.3 108 417-552 31-147 (316)
241 2gf2_A Hibadh, 3-hydroxyisobut 91.0 0.52 1.8E-05 46.3 7.9 31 417-448 1-31 (296)
242 3ggo_A Prephenate dehydrogenas 90.8 1.8 6.1E-05 43.9 11.9 94 414-533 31-130 (314)
243 3dty_A Oxidoreductase, GFO/IDH 90.8 0.29 1E-05 50.9 6.2 116 415-552 11-141 (398)
244 2ahr_A Putative pyrroline carb 90.7 0.6 2E-05 45.1 8.0 101 417-547 4-105 (259)
245 2nvw_A Galactose/lactose metab 90.7 0.46 1.6E-05 51.2 7.7 111 416-551 39-170 (479)
246 2dt5_A AT-rich DNA-binding pro 90.6 0.1 3.5E-06 50.7 2.4 165 323-533 4-174 (211)
247 1lc0_A Biliverdin reductase A; 90.4 0.38 1.3E-05 48.2 6.3 103 416-551 7-120 (294)
248 3v5n_A Oxidoreductase; structu 89.9 0.56 1.9E-05 49.2 7.5 117 414-552 35-166 (417)
249 1ys4_A Aspartate-semialdehyde 89.9 0.68 2.3E-05 47.9 8.0 101 417-532 9-116 (354)
250 3e8x_A Putative NAD-dependent 89.8 0.34 1.2E-05 45.7 5.2 36 412-447 17-53 (236)
251 3dtt_A NADP oxidoreductase; st 89.6 0.35 1.2E-05 47.0 5.2 38 410-448 13-50 (245)
252 3uog_A Alcohol dehydrogenase; 89.6 1.8 6.1E-05 44.2 10.8 33 414-446 188-220 (363)
253 3ids_C GAPDH, glyceraldehyde-3 89.6 0.9 3.1E-05 47.8 8.6 103 417-528 3-133 (359)
254 1dlj_A UDP-glucose dehydrogena 89.5 0.67 2.3E-05 48.7 7.7 124 417-555 1-143 (402)
255 3c24_A Putative oxidoreductase 89.5 1.2 4E-05 43.9 9.0 90 417-534 12-104 (286)
256 2nqt_A N-acetyl-gamma-glutamyl 89.4 1 3.5E-05 46.9 8.9 99 417-535 10-115 (352)
257 3ip1_A Alcohol dehydrogenase, 89.3 2.7 9.2E-05 43.6 12.1 32 414-445 212-244 (404)
258 1x13_A NAD(P) transhydrogenase 89.3 0.59 2E-05 49.4 7.1 35 413-448 169-203 (401)
259 3gt0_A Pyrroline-5-carboxylate 89.2 1.2 4E-05 43.0 8.6 31 417-448 3-37 (247)
260 2vhw_A Alanine dehydrogenase; 89.0 0.42 1.5E-05 49.8 5.7 35 413-448 165-199 (377)
261 2eez_A Alanine dehydrogenase; 88.9 0.65 2.2E-05 48.1 7.0 35 413-448 163-197 (369)
262 3tri_A Pyrroline-5-carboxylate 88.8 1.6 5.6E-05 43.3 9.6 117 416-559 3-128 (280)
263 1yb4_A Tartronic semialdehyde 88.8 0.4 1.4E-05 47.0 5.0 107 417-551 4-118 (295)
264 1pjq_A CYSG, siroheme synthase 88.7 0.4 1.4E-05 51.4 5.3 36 412-447 8-43 (457)
265 4eye_A Probable oxidoreductase 88.6 1.7 5.9E-05 43.9 9.8 34 414-447 158-192 (342)
266 2f1k_A Prephenate dehydrogenas 88.5 2.4 8.2E-05 41.2 10.4 90 417-534 1-94 (279)
267 3gg2_A Sugar dehydrogenase, UD 88.5 1.9 6.4E-05 46.2 10.4 31 417-448 3-33 (450)
268 2izz_A Pyrroline-5-carboxylate 88.1 2 6.8E-05 43.4 9.8 106 415-545 21-132 (322)
269 1jw9_B Molybdopterin biosynthe 87.7 0.28 9.5E-06 48.3 3.1 36 414-449 29-64 (249)
270 3lk7_A UDP-N-acetylmuramoylala 87.5 0.53 1.8E-05 50.0 5.3 37 412-449 5-41 (451)
271 3ip3_A Oxidoreductase, putativ 87.1 0.38 1.3E-05 48.7 3.8 112 417-549 3-120 (337)
272 3gpi_A NAD-dependent epimerase 87.1 0.59 2E-05 45.3 5.0 34 415-448 2-35 (286)
273 1cyd_A Carbonyl reductase; sho 86.9 0.83 2.9E-05 43.0 5.8 35 412-446 3-38 (244)
274 1yb1_A 17-beta-hydroxysteroid 86.8 0.82 2.8E-05 44.5 5.9 36 411-446 26-62 (272)
275 4fs3_A Enoyl-[acyl-carrier-pro 86.8 0.76 2.6E-05 44.8 5.6 36 412-448 2-40 (256)
276 1yqd_A Sinapyl alcohol dehydro 86.8 1.5 5.3E-05 44.8 8.2 42 406-447 178-219 (366)
277 1gpj_A Glutamyl-tRNA reductase 86.7 0.68 2.3E-05 48.7 5.5 114 413-554 164-289 (404)
278 2aef_A Calcium-gated potassium 86.6 0.86 3E-05 43.4 5.8 109 416-553 9-126 (234)
279 2rcy_A Pyrroline carboxylate r 86.6 1.7 5.9E-05 41.8 8.0 32 416-448 4-39 (262)
280 2hq1_A Glucose/ribitol dehydro 86.5 0.77 2.6E-05 43.4 5.4 36 413-448 2-38 (247)
281 2raf_A Putative dinucleotide-b 86.4 0.78 2.7E-05 43.5 5.3 37 411-448 14-50 (209)
282 3ai3_A NADPH-sorbose reductase 86.2 0.97 3.3E-05 43.5 6.0 34 412-445 3-37 (263)
283 1mv8_A GMD, GDP-mannose 6-dehy 86.2 3.1 0.00011 43.9 10.4 31 417-448 1-31 (436)
284 2ep5_A 350AA long hypothetical 86.0 1.1 3.9E-05 46.2 6.8 101 417-532 5-110 (350)
285 4iin_A 3-ketoacyl-acyl carrier 85.9 0.77 2.6E-05 44.6 5.1 53 395-447 7-61 (271)
286 4gkb_A 3-oxoacyl-[acyl-carrier 85.8 1.1 3.8E-05 44.4 6.3 37 411-447 2-39 (258)
287 3d3w_A L-xylulose reductase; u 85.7 1.1 3.8E-05 42.3 6.0 35 412-446 3-38 (244)
288 3g79_A NDP-N-acetyl-D-galactos 85.7 4.4 0.00015 43.9 11.4 32 416-448 18-51 (478)
289 2pd6_A Estradiol 17-beta-dehyd 85.6 1.1 3.7E-05 42.8 5.9 34 412-445 3-37 (264)
290 1z82_A Glycerol-3-phosphate de 85.6 4.1 0.00014 41.0 10.5 99 416-533 14-113 (335)
291 3edm_A Short chain dehydrogena 85.5 1.1 3.8E-05 43.4 6.0 37 412-448 4-41 (259)
292 1t4b_A Aspartate-semialdehyde 85.5 0.4 1.4E-05 50.3 3.0 90 417-531 2-98 (367)
293 1zud_1 Adenylyltransferase THI 85.5 0.57 1.9E-05 46.2 4.0 36 414-449 26-61 (251)
294 2cf5_A Atccad5, CAD, cinnamyl 85.4 1.7 6E-05 44.2 7.7 41 407-447 172-212 (357)
295 3h8v_A Ubiquitin-like modifier 85.4 0.59 2E-05 47.7 4.1 52 398-449 13-69 (292)
296 4fn4_A Short chain dehydrogena 85.3 1.4 4.8E-05 43.7 6.8 36 412-448 3-39 (254)
297 3hdj_A Probable ornithine cycl 85.3 3.2 0.00011 42.3 9.6 114 415-553 120-236 (313)
298 3oig_A Enoyl-[acyl-carrier-pro 85.1 1.1 3.9E-05 43.0 5.9 35 411-445 2-39 (266)
299 2pnf_A 3-oxoacyl-[acyl-carrier 85.0 0.88 3E-05 42.9 5.0 36 411-446 2-38 (248)
300 2r00_A Aspartate-semialdehyde 85.0 1.2 4E-05 46.0 6.2 92 416-532 3-98 (336)
301 2yv2_A Succinyl-COA synthetase 85.0 2.9 9.9E-05 42.3 9.1 116 417-564 14-136 (297)
302 3kkj_A Amine oxidase, flavin-c 84.9 0.9 3.1E-05 40.4 4.7 30 418-448 4-33 (336)
303 3awd_A GOX2181, putative polyo 84.9 1.1 3.8E-05 42.6 5.6 35 412-446 9-44 (260)
304 2wsb_A Galactitol dehydrogenas 84.9 1.1 3.8E-05 42.5 5.6 35 412-446 7-42 (254)
305 3ff4_A Uncharacterized protein 84.8 6.1 0.00021 35.0 10.0 107 417-562 5-116 (122)
306 2hjs_A USG-1 protein homolog; 84.7 1.2 4E-05 46.1 6.1 91 417-532 7-101 (340)
307 4gmf_A Yersiniabactin biosynth 84.6 2.3 7.8E-05 44.5 8.3 108 416-552 7-124 (372)
308 3h7a_A Short chain dehydrogena 84.6 1.1 3.8E-05 43.2 5.6 36 412-448 3-39 (252)
309 3qiv_A Short-chain dehydrogena 84.5 1.2 4.2E-05 42.4 5.7 34 412-445 5-39 (253)
310 2z1n_A Dehydrogenase; reductas 84.4 1.3 4.4E-05 42.7 5.9 34 412-445 3-37 (260)
311 3lyl_A 3-oxoacyl-(acyl-carrier 84.3 1 3.4E-05 42.9 5.0 35 413-447 2-37 (247)
312 1o5i_A 3-oxoacyl-(acyl carrier 84.3 1.2 4.2E-05 42.8 5.7 35 411-445 14-49 (249)
313 3o38_A Short chain dehydrogena 84.3 0.87 3E-05 43.9 4.6 34 412-445 18-53 (266)
314 2ew8_A (S)-1-phenylethanol deh 84.2 1.3 4.3E-05 42.6 5.7 34 412-445 3-37 (249)
315 4h15_A Short chain alcohol deh 84.1 1 3.4E-05 44.7 5.1 35 412-446 7-42 (261)
316 3svt_A Short-chain type dehydr 84.1 1.2 4.1E-05 43.5 5.6 37 411-448 6-43 (281)
317 1u7z_A Coenzyme A biosynthesis 84.0 1.4 4.7E-05 43.4 6.0 36 413-448 5-57 (226)
318 2qrj_A Saccharopine dehydrogen 84.0 3.6 0.00012 43.8 9.5 34 415-448 213-249 (394)
319 2o23_A HADH2 protein; HSD17B10 84.0 1.3 4.5E-05 42.2 5.7 35 412-446 8-43 (265)
320 4g65_A TRK system potassium up 84.0 3.5 0.00012 44.2 9.6 115 403-548 221-347 (461)
321 2pzm_A Putative nucleotide sug 83.9 1 3.4E-05 44.8 5.0 37 411-447 15-52 (330)
322 2cdc_A Glucose dehydrogenase g 83.9 0.93 3.2E-05 46.3 4.9 31 416-446 181-211 (366)
323 1zej_A HBD-9, 3-hydroxyacyl-CO 83.8 4.1 0.00014 41.3 9.5 75 416-511 12-86 (293)
324 3rd5_A Mypaa.01249.C; ssgcid, 83.8 1.4 4.7E-05 43.3 5.9 34 412-445 12-46 (291)
325 1sby_A Alcohol dehydrogenase; 83.8 1.2 4.2E-05 42.5 5.4 36 413-448 2-38 (254)
326 1nff_A Putative oxidoreductase 83.7 1.4 4.8E-05 42.7 5.9 34 412-445 3-37 (260)
327 2yv3_A Aspartate-semialdehyde 83.7 0.56 1.9E-05 48.3 3.1 93 417-532 1-94 (331)
328 3tpc_A Short chain alcohol deh 83.6 1.4 4.6E-05 42.4 5.7 35 412-446 3-38 (257)
329 3dr3_A N-acetyl-gamma-glutamyl 83.6 3.1 0.0001 43.2 8.6 104 417-535 5-111 (337)
330 2yv1_A Succinyl-COA ligase [AD 83.6 2.7 9.2E-05 42.5 8.1 116 417-564 14-135 (294)
331 1hdo_A Biliverdin IX beta redu 83.5 1.5 5E-05 39.7 5.6 32 416-447 3-35 (206)
332 2q3e_A UDP-glucose 6-dehydroge 83.3 2.9 9.9E-05 44.6 8.6 31 417-448 6-38 (467)
333 3tzq_B Short-chain type dehydr 83.3 1.4 4.8E-05 42.9 5.7 37 411-448 6-43 (271)
334 1zem_A Xylitol dehydrogenase; 83.3 1.4 4.9E-05 42.5 5.7 34 412-445 3-37 (262)
335 4fgs_A Probable dehydrogenase 83.3 1.4 4.7E-05 44.3 5.7 40 408-448 21-61 (273)
336 2fwm_X 2,3-dihydro-2,3-dihydro 83.3 1.5 5.2E-05 42.0 5.8 35 412-446 3-38 (250)
337 3uf0_A Short-chain dehydrogena 83.2 1.5 5.2E-05 43.0 5.9 35 412-446 27-62 (273)
338 2bgk_A Rhizome secoisolaricire 83.2 1.5 5.2E-05 42.1 5.8 34 412-445 12-46 (278)
339 2fp4_A Succinyl-COA ligase [GD 83.2 2.1 7.1E-05 43.7 7.1 108 414-551 11-127 (305)
340 3n74_A 3-ketoacyl-(acyl-carrie 83.2 1.5 5.1E-05 42.0 5.7 34 412-445 5-39 (261)
341 2o3j_A UDP-glucose 6-dehydroge 83.1 3.4 0.00012 44.4 9.1 31 417-448 10-42 (481)
342 2ae2_A Protein (tropinone redu 83.1 1.5 5E-05 42.3 5.7 34 412-445 5-39 (260)
343 3e03_A Short chain dehydrogena 83.1 1.5 5.3E-05 42.7 5.9 35 412-446 2-37 (274)
344 1d7o_A Enoyl-[acyl-carrier pro 83.0 1.5 5.2E-05 43.1 5.8 36 411-446 3-41 (297)
345 4g81_D Putative hexonate dehyd 83.0 0.96 3.3E-05 44.9 4.4 35 413-448 6-41 (255)
346 1w6u_A 2,4-dienoyl-COA reducta 82.9 1.5 5.1E-05 42.9 5.7 35 412-446 22-57 (302)
347 4id9_A Short-chain dehydrogena 82.8 0.98 3.3E-05 44.8 4.4 37 412-448 15-52 (347)
348 3vps_A TUNA, NAD-dependent epi 82.8 1.1 3.6E-05 43.7 4.6 35 413-447 4-39 (321)
349 3goh_A Alcohol dehydrogenase, 82.8 2 6.9E-05 42.7 6.7 89 413-530 140-229 (315)
350 1pqw_A Polyketide synthase; ro 82.8 1.9 6.5E-05 39.6 6.1 33 414-446 37-70 (198)
351 1h5q_A NADP-dependent mannitol 82.8 1.2 4.1E-05 42.4 4.8 35 412-446 10-45 (265)
352 2h7i_A Enoyl-[acyl-carrier-pro 82.8 1.2 4E-05 43.3 4.9 33 413-445 4-39 (269)
353 1vl8_A Gluconate 5-dehydrogena 82.6 1.6 5.4E-05 42.6 5.7 35 411-445 16-51 (267)
354 3i1j_A Oxidoreductase, short c 82.6 1.3 4.3E-05 42.0 5.0 34 412-445 10-44 (247)
355 4dry_A 3-oxoacyl-[acyl-carrier 82.6 0.92 3.2E-05 44.7 4.1 40 406-445 23-63 (281)
356 3ak4_A NADH-dependent quinucli 82.6 1.6 5.5E-05 42.0 5.7 34 412-445 8-42 (263)
357 3nyw_A Putative oxidoreductase 82.6 1.3 4.5E-05 42.7 5.1 34 412-445 3-37 (250)
358 2z1m_A GDP-D-mannose dehydrata 82.6 1.2 4.1E-05 43.8 4.9 33 414-446 1-34 (345)
359 1zk4_A R-specific alcohol dehy 82.5 1.2 4.1E-05 42.1 4.7 35 412-446 2-37 (251)
360 3pxx_A Carveol dehydrogenase; 82.5 1.5 5.2E-05 42.5 5.6 35 413-448 7-42 (287)
361 3rwb_A TPLDH, pyridoxal 4-dehy 82.5 1.5 5E-05 42.2 5.4 36 412-448 2-38 (247)
362 3r1i_A Short-chain type dehydr 82.4 1.6 5.4E-05 42.9 5.7 35 412-446 28-63 (276)
363 3f1l_A Uncharacterized oxidore 82.3 1.8 6E-05 41.7 5.9 34 412-445 8-42 (252)
364 2c29_D Dihydroflavonol 4-reduc 82.3 1 3.5E-05 44.6 4.4 34 414-447 3-37 (337)
365 3sx2_A Putative 3-ketoacyl-(ac 82.2 1.7 5.8E-05 42.2 5.8 35 411-445 8-43 (278)
366 3vtz_A Glucose 1-dehydrogenase 82.2 1.3 4.5E-05 43.3 5.0 36 411-446 9-45 (269)
367 1xg5_A ARPG836; short chain de 82.1 1.4 4.8E-05 42.8 5.2 34 413-446 29-63 (279)
368 1hdc_A 3-alpha, 20 beta-hydrox 82.1 1.7 5.7E-05 41.9 5.6 33 413-445 2-35 (254)
369 3s55_A Putative short-chain de 82.1 1.6 5.4E-05 42.5 5.6 34 413-446 7-41 (281)
370 3ius_A Uncharacterized conserv 82.1 1.1 3.8E-05 43.1 4.4 32 416-447 5-36 (286)
371 1ja9_A 4HNR, 1,3,6,8-tetrahydr 82.1 1.3 4.3E-05 42.5 4.7 36 412-447 17-53 (274)
372 1y1p_A ARII, aldehyde reductas 82.1 1.5 5.2E-05 43.0 5.4 35 413-447 8-43 (342)
373 1uls_A Putative 3-oxoacyl-acyl 82.0 1.8 6.1E-05 41.5 5.8 33 413-445 2-35 (245)
374 3oqb_A Oxidoreductase; structu 82.0 2.3 7.9E-05 43.6 7.0 115 415-553 5-140 (383)
375 3p19_A BFPVVD8, putative blue 82.0 1.4 4.9E-05 43.0 5.2 36 411-446 11-47 (266)
376 4eso_A Putative oxidoreductase 81.9 1.7 5.7E-05 42.1 5.6 33 413-445 5-38 (255)
377 3zv4_A CIS-2,3-dihydrobiphenyl 81.9 1.7 5.8E-05 42.6 5.7 33 413-445 2-35 (281)
378 4a7p_A UDP-glucose dehydrogena 81.9 2.4 8.3E-05 45.5 7.3 32 416-448 8-39 (446)
379 4e6p_A Probable sorbitol dehyd 81.9 1.8 6E-05 41.8 5.7 36 412-448 4-40 (259)
380 2d1y_A Hypothetical protein TT 81.9 1.7 5.7E-05 41.8 5.6 34 413-446 3-37 (256)
381 3v2g_A 3-oxoacyl-[acyl-carrier 81.9 1.9 6.6E-05 42.2 6.1 37 411-447 26-63 (271)
382 3pgx_A Carveol dehydrogenase; 81.8 1.7 5.8E-05 42.4 5.7 34 412-445 11-45 (280)
383 3uve_A Carveol dehydrogenase ( 81.8 1.9 6.4E-05 42.1 6.0 35 411-445 6-41 (286)
384 1fmc_A 7 alpha-hydroxysteroid 81.7 1.2 4E-05 42.2 4.3 34 412-445 7-41 (255)
385 3afn_B Carbonyl reductase; alp 81.7 1.1 3.8E-05 42.4 4.1 34 413-446 4-38 (258)
386 3op4_A 3-oxoacyl-[acyl-carrier 81.6 1.5 5E-05 42.3 5.0 34 412-445 5-39 (248)
387 2q2v_A Beta-D-hydroxybutyrate 81.6 1.2 4.3E-05 42.7 4.5 35 413-448 1-36 (255)
388 4dpl_A Malonyl-COA/succinyl-CO 81.6 2.2 7.7E-05 44.5 6.7 105 416-533 7-113 (359)
389 4dpk_A Malonyl-COA/succinyl-CO 81.6 2.2 7.7E-05 44.5 6.7 105 416-533 7-113 (359)
390 4dqx_A Probable oxidoreductase 81.6 1.9 6.4E-05 42.4 5.9 35 411-445 22-57 (277)
391 3ucx_A Short chain dehydrogena 81.5 1.8 6.2E-05 41.9 5.7 35 411-445 6-41 (264)
392 1iy8_A Levodione reductase; ox 81.5 1.8 6.1E-05 41.9 5.6 34 412-445 9-43 (267)
393 1xq6_A Unknown protein; struct 81.5 1.9 6.6E-05 40.2 5.7 33 414-446 2-37 (253)
394 3ijr_A Oxidoreductase, short c 81.4 1.8 6E-05 42.8 5.7 34 412-445 43-77 (291)
395 3ioy_A Short-chain dehydrogena 81.4 1.7 5.8E-05 43.7 5.6 34 412-445 4-38 (319)
396 2jah_A Clavulanic acid dehydro 81.4 1.9 6.4E-05 41.4 5.7 33 413-445 4-37 (247)
397 3t4x_A Oxidoreductase, short c 81.4 1.5 5E-05 42.6 5.0 38 410-448 4-42 (267)
398 3sxp_A ADP-L-glycero-D-mannohe 81.3 1.8 6.2E-05 43.4 5.8 37 411-447 5-44 (362)
399 3lf2_A Short chain oxidoreduct 81.3 1.9 6.5E-05 41.8 5.8 36 412-448 4-40 (265)
400 2zat_A Dehydrogenase/reductase 81.2 1.5 5.2E-05 42.1 5.0 34 412-445 10-44 (260)
401 2x5o_A UDP-N-acetylmuramoylala 81.2 0.95 3.2E-05 47.8 3.8 37 413-450 2-38 (439)
402 3t7c_A Carveol dehydrogenase; 81.1 2 6.9E-05 42.5 6.0 35 411-445 23-58 (299)
403 2dtx_A Glucose 1-dehydrogenase 81.1 1.6 5.5E-05 42.4 5.2 34 413-446 5-39 (264)
404 2h6e_A ADH-4, D-arabinose 1-de 81.1 2.7 9.1E-05 42.4 6.9 32 415-446 170-203 (344)
405 3imf_A Short chain dehydrogena 81.0 1.4 4.9E-05 42.4 4.7 36 412-448 2-38 (257)
406 1r0k_A 1-deoxy-D-xylulose 5-ph 81.0 5.2 0.00018 42.4 9.3 121 417-553 5-149 (388)
407 3ppi_A 3-hydroxyacyl-COA dehyd 81.0 1.5 5E-05 42.7 4.8 34 412-445 26-60 (281)
408 3rkr_A Short chain oxidoreduct 80.9 1.5 5.1E-05 42.4 4.8 33 413-445 26-59 (262)
409 2wyu_A Enoyl-[acyl carrier pro 80.9 1.6 5.4E-05 42.2 5.0 35 412-446 4-41 (261)
410 1pjc_A Protein (L-alanine dehy 80.7 1.8 6.1E-05 44.7 5.6 35 413-448 164-198 (361)
411 3nrc_A Enoyl-[acyl-carrier-pro 80.7 1.6 5.5E-05 42.7 5.0 34 413-446 23-59 (280)
412 2pd4_A Enoyl-[acyl-carrier-pro 80.7 1.7 5.8E-05 42.3 5.1 34 413-446 3-39 (275)
413 3ew7_A LMO0794 protein; Q8Y8U8 80.7 1.8 6.1E-05 39.7 5.1 31 417-447 1-32 (221)
414 1ae1_A Tropinone reductase-I; 80.7 2 6.9E-05 41.8 5.7 34 412-445 17-51 (273)
415 3tsc_A Putative oxidoreductase 80.6 2.1 7.2E-05 41.7 5.8 36 412-448 7-43 (277)
416 1yxm_A Pecra, peroxisomal tran 80.6 1.9 6.6E-05 42.2 5.6 35 412-446 14-49 (303)
417 2rhc_B Actinorhodin polyketide 80.5 2 6.7E-05 42.0 5.6 33 413-445 19-52 (277)
418 3pk0_A Short-chain dehydrogena 80.5 1.5 5.2E-05 42.4 4.8 36 412-448 6-42 (262)
419 1zsy_A Mitochondrial 2-enoyl t 80.5 2.8 9.7E-05 42.5 6.9 35 414-448 166-201 (357)
420 1xq1_A Putative tropinone redu 80.4 1.6 5.3E-05 41.9 4.7 35 412-446 10-45 (266)
421 3tjr_A Short chain dehydrogena 80.4 2 6.7E-05 42.7 5.6 33 413-445 28-61 (301)
422 2bka_A CC3, TAT-interacting pr 80.4 1.5 5.2E-05 41.1 4.6 33 414-446 16-51 (242)
423 3ftp_A 3-oxoacyl-[acyl-carrier 80.4 1.6 5.5E-05 42.7 4.9 36 411-446 23-59 (270)
424 1yde_A Retinal dehydrogenase/r 80.4 2.2 7.6E-05 41.6 5.9 34 412-445 5-39 (270)
425 3uce_A Dehydrogenase; rossmann 80.3 1.3 4.4E-05 41.7 4.0 34 413-446 3-37 (223)
426 2uvd_A 3-oxoacyl-(acyl-carrier 80.3 1.5 5.3E-05 41.8 4.6 34 413-446 1-35 (246)
427 2q1w_A Putative nucleotide sug 80.3 1.8 6E-05 43.1 5.2 36 412-447 17-53 (333)
428 3k31_A Enoyl-(acyl-carrier-pro 80.3 2 6.9E-05 42.5 5.6 36 412-448 26-64 (296)
429 3f9i_A 3-oxoacyl-[acyl-carrier 80.2 1.6 5.6E-05 41.4 4.8 35 411-445 9-44 (249)
430 2ag5_A DHRS6, dehydrogenase/re 80.0 1.7 5.8E-05 41.5 4.8 33 413-445 3-36 (246)
431 3rui_A Ubiquitin-like modifier 80.0 1.4 4.7E-05 46.0 4.4 36 414-449 32-67 (340)
432 3is3_A 17BETA-hydroxysteroid d 79.9 1.9 6.6E-05 41.9 5.3 37 411-447 13-50 (270)
433 1gee_A Glucose 1-dehydrogenase 79.9 1.4 4.6E-05 42.1 4.1 34 413-446 4-38 (261)
434 3gaf_A 7-alpha-hydroxysteroid 79.9 1.7 5.7E-05 42.0 4.8 36 412-448 8-44 (256)
435 3gem_A Short chain dehydrogena 79.8 1.3 4.4E-05 43.2 4.0 35 412-446 23-58 (260)
436 3ojo_A CAP5O; rossmann fold, c 79.7 13 0.00045 39.7 12.1 33 415-448 10-42 (431)
437 3sc4_A Short chain dehydrogena 79.7 2 6.9E-05 42.2 5.4 36 412-447 5-41 (285)
438 4b79_A PA4098, probable short- 79.7 2.4 8.2E-05 41.9 5.9 34 414-448 9-43 (242)
439 2gdz_A NAD+-dependent 15-hydro 79.6 2.1 7.2E-05 41.2 5.4 33 413-445 4-37 (267)
440 3tl3_A Short-chain type dehydr 79.6 1.6 5.6E-05 41.9 4.6 35 412-446 5-40 (257)
441 4fc7_A Peroxisomal 2,4-dienoyl 79.6 2 6.7E-05 42.0 5.2 34 412-445 23-57 (277)
442 1np3_A Ketol-acid reductoisome 79.6 1.1 3.9E-05 45.8 3.6 34 414-448 14-47 (338)
443 2ptg_A Enoyl-acyl carrier redu 79.6 2.3 7.8E-05 42.4 5.8 35 412-446 5-42 (319)
444 4egf_A L-xylulose reductase; s 79.5 1.6 5.6E-05 42.3 4.6 35 413-448 17-52 (266)
445 2ywl_A Thioredoxin reductase r 79.5 6.9 0.00024 34.9 8.5 31 417-448 2-32 (180)
446 3m1a_A Putative dehydrogenase; 79.4 1.5 5.3E-05 42.5 4.4 35 413-447 2-37 (281)
447 4imr_A 3-oxoacyl-(acyl-carrier 79.4 1.6 5.6E-05 42.8 4.6 36 412-448 29-65 (275)
448 3i4f_A 3-oxoacyl-[acyl-carrier 79.4 1.8 6E-05 41.6 4.8 37 412-448 3-40 (264)
449 2qq5_A DHRS1, dehydrogenase/re 79.4 1.8 6.2E-05 41.6 4.8 33 413-445 2-35 (260)
450 3hwr_A 2-dehydropantoate 2-red 79.4 5.5 0.00019 40.0 8.6 107 412-536 15-125 (318)
451 2a4k_A 3-oxoacyl-[acyl carrier 79.3 2.3 8E-05 41.3 5.7 33 413-445 3-36 (263)
452 3s2e_A Zinc-containing alcohol 79.2 2.9 0.0001 41.9 6.5 33 414-446 165-197 (340)
453 1uzm_A 3-oxoacyl-[acyl-carrier 79.2 1.8 6.3E-05 41.4 4.8 36 411-446 10-46 (247)
454 2d8a_A PH0655, probable L-thre 79.2 2.1 7.1E-05 43.3 5.4 31 415-445 167-198 (348)
455 3v2h_A D-beta-hydroxybutyrate 79.2 2.1 7E-05 42.1 5.3 34 412-445 21-55 (281)
456 4e12_A Diketoreductase; oxidor 79.2 2.1 7E-05 42.4 5.3 31 417-448 5-35 (283)
457 4a2c_A Galactitol-1-phosphate 79.2 3.6 0.00012 41.2 7.2 37 412-448 157-193 (346)
458 2o2s_A Enoyl-acyl carrier redu 79.1 2.1 7.1E-05 42.7 5.3 35 412-446 5-42 (315)
459 4hp8_A 2-deoxy-D-gluconate 3-d 79.1 1.6 5.5E-05 43.3 4.4 36 412-448 5-41 (247)
460 3grk_A Enoyl-(acyl-carrier-pro 79.1 2.2 7.5E-05 42.2 5.5 36 412-448 27-65 (293)
461 2b4q_A Rhamnolipids biosynthes 79.1 2.1 7.1E-05 42.0 5.2 35 413-448 26-61 (276)
462 3ado_A Lambda-crystallin; L-gu 79.1 1.2 4.2E-05 45.8 3.7 32 416-448 6-37 (319)
463 3rih_A Short chain dehydrogena 79.0 1.7 6E-05 43.2 4.7 36 412-448 37-73 (293)
464 3cxt_A Dehydrogenase with diff 79.0 2.3 7.9E-05 42.1 5.6 34 412-445 30-64 (291)
465 1ooe_A Dihydropteridine reduct 79.0 1.8 6.2E-05 40.9 4.6 33 414-446 1-34 (236)
466 4g65_A TRK system potassium up 78.8 0.91 3.1E-05 48.7 2.8 32 416-448 3-34 (461)
467 3gvc_A Oxidoreductase, probabl 78.8 1.6 5.5E-05 43.0 4.4 34 412-445 25-59 (277)
468 2rh8_A Anthocyanidin reductase 78.8 2.4 8.1E-05 41.9 5.6 32 416-447 9-41 (338)
469 1hxh_A 3BETA/17BETA-hydroxyste 78.8 1.6 5.5E-05 41.9 4.2 35 413-448 3-38 (253)
470 2p4h_X Vestitone reductase; NA 78.7 2 6.8E-05 41.9 5.0 31 416-446 1-32 (322)
471 3u9l_A 3-oxoacyl-[acyl-carrier 78.7 3.6 0.00012 41.5 7.1 50 413-468 2-52 (324)
472 3h2s_A Putative NADH-flavin re 78.7 2.2 7.6E-05 39.3 5.1 31 417-447 1-32 (224)
473 1uuf_A YAHK, zinc-type alcohol 78.5 4.8 0.00016 41.3 8.0 32 415-446 194-225 (369)
474 3vku_A L-LDH, L-lactate dehydr 78.4 6 0.00021 40.7 8.7 35 414-448 7-42 (326)
475 2p91_A Enoyl-[acyl-carrier-pro 78.4 2 6.8E-05 42.0 4.9 34 413-446 18-54 (285)
476 1qsg_A Enoyl-[acyl-carrier-pro 78.4 2 7E-05 41.4 4.9 34 413-446 6-42 (265)
477 4b7c_A Probable oxidoreductase 78.4 3.8 0.00013 40.9 7.1 33 414-446 148-181 (336)
478 4b4o_A Epimerase family protei 78.3 2.1 7.3E-05 41.6 5.1 31 417-447 1-32 (298)
479 3fbg_A Putative arginate lyase 78.3 4.2 0.00015 41.0 7.4 32 415-446 150-182 (346)
480 2b69_A UDP-glucuronate decarbo 78.3 2.2 7.5E-05 42.4 5.2 35 413-447 24-59 (343)
481 1lnq_A MTHK channels, potassiu 78.2 5.5 0.00019 40.0 8.2 109 416-553 115-232 (336)
482 3icc_A Putative 3-oxoacyl-(acy 78.2 2.1 7.2E-05 40.6 4.8 36 413-448 4-40 (255)
483 4a7p_A UDP-glucose dehydrogena 78.2 6.3 0.00021 42.3 9.0 115 402-550 308-437 (446)
484 2o7s_A DHQ-SDH PR, bifunctiona 78.2 1.5 5E-05 47.8 4.1 57 391-448 330-395 (523)
485 1rkx_A CDP-glucose-4,6-dehydra 78.1 2 6.8E-05 42.9 4.9 34 414-447 7-41 (357)
486 2nm0_A Probable 3-oxacyl-(acyl 78.1 2.5 8.4E-05 41.0 5.4 35 412-446 17-52 (253)
487 3tz6_A Aspartate-semialdehyde 78.1 3.5 0.00012 42.8 6.8 92 416-532 1-96 (344)
488 2vn8_A Reticulon-4-interacting 78.0 3.9 0.00013 41.8 7.1 33 414-446 182-215 (375)
489 3pwk_A Aspartate-semialdehyde 78.0 2.3 7.9E-05 44.6 5.4 90 416-532 2-97 (366)
490 1h2b_A Alcohol dehydrogenase; 78.0 4.5 0.00016 41.1 7.6 33 414-446 185-218 (359)
491 3ruf_A WBGU; rossmann fold, UD 77.9 2 7E-05 42.6 4.8 34 414-447 23-57 (351)
492 4iiu_A 3-oxoacyl-[acyl-carrier 77.9 2.1 7E-05 41.4 4.8 37 412-448 22-59 (267)
493 3grp_A 3-oxoacyl-(acyl carrier 77.9 2.1 7.2E-05 41.8 4.9 34 412-445 23-57 (266)
494 1xkq_A Short-chain reductase f 77.8 2 6.7E-05 41.9 4.6 33 413-445 3-36 (280)
495 3nkl_A UDP-D-quinovosamine 4-d 77.8 2.7 9.4E-05 36.5 5.1 34 415-448 3-37 (141)
496 1e3i_A Alcohol dehydrogenase, 77.8 4.2 0.00014 41.5 7.3 32 414-445 194-226 (376)
497 1piw_A Hypothetical zinc-type 77.7 4.9 0.00017 40.8 7.7 32 415-446 179-210 (360)
498 4dmm_A 3-oxoacyl-[acyl-carrier 77.7 2.3 8E-05 41.4 5.1 35 412-446 24-59 (269)
499 3qwb_A Probable quinone oxidor 77.6 3.8 0.00013 41.0 6.8 35 413-447 146-181 (334)
500 1g0o_A Trihydroxynaphthalene r 77.6 2 6.9E-05 41.9 4.6 34 413-446 26-60 (283)
No 1
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=100.00 E-value=1.8e-120 Score=975.14 Aligned_cols=380 Identities=47% Similarity=0.818 Sum_probs=366.9
Q ss_pred hhHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhCccch--HHHHhhcCCCeEEEEEEeEECCCCceEEEEEEEEEe
Q 008128 191 KTAGSIVEAALKRDPHEIEFIQSVQESLHALERVIAKNSHYV--NIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQF 268 (577)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~ef~qav~~~~~~~~~~~~~~p~y~--~~le~l~~Per~i~~rvp~~dd~G~~~v~~GyRVqh 268 (577)
.+++.+++++++|+|+|+||+|||+|+++++.|+|++||+|. .++|+|++|+|+|+|||||+||+|++++|+||||||
T Consensus 8 ~~~~~~~~~~~~~~~~~~ef~qa~~e~~~~l~~~~~~~p~y~~~~~~e~l~~PeR~i~~~vp~~~D~G~~~v~~GyRvqh 87 (450)
T 4fcc_A 8 YSLESFLNHVQKRDPNQTEFAQAVREVMTTLWPFLEQNPKYRQMSLLERLVEPERVIQFRVVWVDDRNQVQVNRAWRVQF 87 (450)
T ss_dssp -CHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHHHHCGGGTSTTHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred hhHHHHHHHHHhhCcCChHHHHHHHHHHHHHHHHHHhChhhhhhhHHHHHhCCceEEEEEEEEEECCCcEEEEEEEEEEE
Confidence 358899999999999999999999999999999999999998 599999999999999999999999999999999999
Q ss_pred cCCCCCCCCCeeeecCCCHHHHHHHhHHhHHhhhccCCCCCCceEEEecCCCCCCHHHHHHHHHHHHHHHhhhcCCCccc
Q 008128 269 SQALGPCRGGLRFHPSMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDL 348 (577)
Q Consensus 269 s~alGPakGGlRfhp~vt~~evk~LA~~MT~KnAL~gLP~GGaKGGI~~DP~~~s~~Eler~~r~f~~eL~~~IGp~~DV 348 (577)
|+++|||||||||||++|++|+++||++|||||||++||||||||||++||+++|+.|+|||||+||++|.+||||++||
T Consensus 88 n~alGP~kGG~Rfhp~v~l~ev~~La~~mT~KnAl~gLP~GGgKggi~~DPk~~s~~El~R~~~~f~~eL~~~iG~d~dv 167 (450)
T 4fcc_A 88 SSAIGPYKGGMRFHPSVNLSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSEGEVMRFCQALMTELYRHLGADTDV 167 (450)
T ss_dssp ECSSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTSSCCEEEEEESCCCTTCCHHHHHHHHHHHHHHHGGGCBTTTEE
T ss_pred CCCCCCCCCceEecCCCCHHHHHHHHHHHHHHHHHcCCCCCCCceEEecCCCcCCHHHHHHHHHHHHHHhhheecCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcCChhHHHHHHHHhhhhhCCccccccCccccccCCCCCCCcchHHHHHHHHHHHHHcCCCCCCceEEEEecchHH
Q 008128 349 PSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIA 428 (577)
Q Consensus 349 papDvGt~~~em~~i~~~y~~~~g~~~g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG 428 (577)
|||||||+++||+||+++|+++.+...+++||||+.+|||.+|++||||||+|++++++++++.+++|+||+||||||||
T Consensus 168 pa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~~~~l~Gk~vaVQG~GnVG 247 (450)
T 4fcc_A 168 PAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYFTEAMLKRHGMGFEGMRVSVSGSGNVA 247 (450)
T ss_dssp EECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCSTTCEEEEECCSHHH
T ss_pred CccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeHHHHHHHHHHHcCCCcCCCEEEEeCCChHH
Confidence 99999999999999999999999998999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhc-CcccccccccCCceEeCCCCccccccceeecCCc
Q 008128 429 MHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQ-RSLRDYSKTYARSKYYDEAKPWNERCDVAFPCAS 507 (577)
Q Consensus 429 ~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~-g~l~~y~~~~p~a~~i~~~eil~~~cDIlIPcA~ 507 (577)
+++|++|++.|+|||++||++|+||||+|||+++|..+++.|..+ +++.+|.+.+ ++++++++++|+++||||+|||+
T Consensus 248 ~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~-g~~~~~~~~i~~~~~DI~iPcAl 326 (450)
T 4fcc_A 248 QYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEF-GLVYLEGQQPWSVPVDIALPCAT 326 (450)
T ss_dssp HHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHH-TCEEEETCCGGGSCCSEEEECSC
T ss_pred HHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccC-CcEEecCcccccCCccEEeeccc
Confidence 999999999999999999999999999999999998888877644 6777776554 78899999999999999999999
Q ss_pred ccccchhhHhhhhccCceEEEecCCCCCCHHHHHHHHhCCcEEecchhccccceeehhhhhccc
Q 008128 508 QNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVRYSIFYSTCF 571 (577)
Q Consensus 508 ~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI~viPD~~aNAGGVivS~~Ev~~~ 571 (577)
+|+||.+||++|..++||+|+||||+|+||||+++|++|||+|+||+++||||||+||||+.-+
T Consensus 327 ~~~I~~~~a~~L~a~g~k~IaEgAN~p~t~eA~~iL~~rGIl~~PD~~aNAGGVi~S~~E~~qn 390 (450)
T 4fcc_A 327 QNELDVDAAHQLIANGVKAVAEGANMPTTIEATELFQQAGVLFAPGKAANAGGVATSGLEMAQN 390 (450)
T ss_dssp TTCBCHHHHHHHHHTTCCEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHhcCceEEecCCCCCCCHHHHHHHHHCCCEEEChHHhcCccHhhhHHHHhhh
Confidence 9999999999998889999999999999999999999999999999999999999999999643
No 2
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=100.00 E-value=8.4e-120 Score=969.80 Aligned_cols=382 Identities=48% Similarity=0.943 Sum_probs=371.7
Q ss_pred hhhHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEECCCCceEEEEEEEEEec
Q 008128 190 SKTAGSIVEAALKRDPHEIEFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFS 269 (577)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~ef~qav~~~~~~~~~~~~~~p~y~~~le~l~~Per~i~~rvp~~dd~G~~~v~~GyRVqhs 269 (577)
.+.++.+++++++|+|+|+||+|+|+|++++++|+|+++|+|.+++++|++|+|+++|+|||+||+|++++|+|||||||
T Consensus 13 ~~~~~~~~~~~~~~~~~~~ef~qa~~e~~~~~~~~~~~~p~~~~~~~~l~~P~r~i~~~vp~~~D~G~~~v~~GyRvqhn 92 (456)
T 3r3j_A 13 DNQIEELREKVVSKNKNEPEFLQAFEEVLSCLKPVFKKDNVYIGVLENIAEPERVIQFRVPWINDKGEHKMNRGFRVQYN 92 (456)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTHHHHHHCTHHHHHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHhhChHhhHHHHhccCCceEEEEEEEEEeCCCcEEEEEEEEEEEC
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCeeeecCCCHHHHHHHhHHhHHhhhccCCCCCCceEEEecCCCCCCHHHHHHHHHHHHHHHhhhcCCCcccC
Q 008128 270 QALGPCRGGLRFHPSMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLP 349 (577)
Q Consensus 270 ~alGPakGGlRfhp~vt~~evk~LA~~MT~KnAL~gLP~GGaKGGI~~DP~~~s~~Eler~~r~f~~eL~~~IGp~~DVp 349 (577)
+++|||||||||||++|++|+++||++|||||||++||||||||||++||+++|+.|++||||+||++|.+||||++|||
T Consensus 93 ~a~GPakGGiR~~p~v~~~ev~~La~~mt~KnAl~~lP~GGgKGgi~~DPk~~s~~el~r~~r~f~~eL~~~iGp~~Dvp 172 (456)
T 3r3j_A 93 SVLGPYKGGLRFHPAVNLSVIKFLGFEQIFKNSLTTLPMGGGKGGSDFDPKGKSENEILKFCQSFMTNLFRYIGPNTDVP 172 (456)
T ss_dssp CSSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHHTSSCCCEEEEEESCCCTTCCHHHHHHHHHHHHHHHGGGCBTTTEEE
T ss_pred CcCCCccCceEecCCCCHHHHHHHHHHHHHHHHhcCCCCCcceeEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcCChhHHHHHHHHhhhhhCCccccccCccccccCCCCCCCcchHHHHHHHHHHHHHcCCCCCCceEEEEecchHHH
Q 008128 350 SEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAM 429 (577)
Q Consensus 350 apDvGt~~~em~~i~~~y~~~~g~~~g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG~ 429 (577)
||||||+++||+||+++|+++.+...|++||||+.+|||.+|++||||||++++++++++++.+++|+||+||||||||+
T Consensus 173 ApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~VaVQG~GnVG~ 252 (456)
T 3r3j_A 173 AGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVYFAENVLKDLNDNLENKKCLVSGSGNVAQ 252 (456)
T ss_dssp ECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHHHHHHHHHTTTCCSTTCCEEEECCSHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHHHHHHHHHHcCCCccCCEEEEECCCHHHH
Confidence 99999999999999999999998888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhc-CcccccccccCCceEeCCCCccccccceeecCCcc
Q 008128 430 HVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQ-RSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQ 508 (577)
Q Consensus 430 ~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~-g~l~~y~~~~p~a~~i~~~eil~~~cDIlIPcA~~ 508 (577)
++|++|++.|+|||+|||++|+||||+|||+++|..+.++|+.+ +++.+|...+|++++++++++|+++||||+|||++
T Consensus 253 ~aa~~L~e~GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~~~a~~v~~~~i~~~~~DI~iPcA~~ 332 (456)
T 3r3j_A 253 YLVEKLIEKGAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLKYSKTAKYFENQKPWNIPCDIAFPCATQ 332 (456)
T ss_dssp HHHHHHHHHTCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGGTCSSCEEECSCCGGGSCCSEEEECSCT
T ss_pred HHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhhcCCCceEeCCccccccCccEEEeCCCc
Confidence 99999999999999999999999999999999998887888765 57888887889999999999999999999999999
Q ss_pred cccchhhHhhhhccCceEEEecCCCCCCHHHHHHHHhCCcEEecchhccccceeehhhhhccc
Q 008128 509 NEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVRYSIFYSTCF 571 (577)
Q Consensus 509 n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI~viPD~~aNAGGVivS~~Ev~~~ 571 (577)
|+||.+||++|++++||+|+||||+|+||||+++|++|||+|+||+++|||||++||||+..+
T Consensus 333 ~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA~~iL~~rGI~~~PD~~aNAGGV~vS~~E~~qn 395 (456)
T 3r3j_A 333 NEINENDADLFIQNKCKMIVEGANMPTHIKALHKLKQNNIILCPSKAANAGGVAVSGLEMSQN 395 (456)
T ss_dssp TCBCHHHHHHHHHHTCCEEECCSSSCBCTTHHHHHHTTTCEEECHHHHTTHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHhcCCeEEEecCCCCCCHHHHHHHHHCCCEEeChHHhcCCceeeehHHHhhc
Confidence 999999999999999999999999999999999999999999999999999999999999754
No 3
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=100.00 E-value=3.5e-118 Score=960.96 Aligned_cols=383 Identities=45% Similarity=0.860 Sum_probs=372.9
Q ss_pred HhhhHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEECCCCceEEEEEEEEEe
Q 008128 189 MSKTAGSIVEAALKRDPHEIEFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQF 268 (577)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~ef~qav~~~~~~~~~~~~~~p~y~~~le~l~~Per~i~~rvp~~dd~G~~~v~~GyRVqh 268 (577)
|++.++.+++++.+|+|+|+||+|++++++++++++|+.+|+|..++++|++|+|+|+|+|||+||+|++++|+||||||
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~le~l~~Per~i~~~vp~~~D~G~v~v~~Gyrvqh 104 (470)
T 2bma_A 25 VDQEMNNVYERVMKLDPNQVEFLQAFHEILYSLKPLFMEEPKYLPIIETLSEPERAIQFRVCWLDDNGVQRKNRCFRVQY 104 (470)
T ss_dssp HHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTHHHHHHCTTHHHHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHhhCCCCchHHHHHHHHHHHHHHHhccChhhhHHHHHhcCCceEEEEEEEEEeCCCCEEEEEEEEEEE
Confidence 44457899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCeeeecCCCHHHHHHHhHHhHHhhhccCCCCCCceEEEecCCCCCCHHHHHHHHHHHHHHHhhhcCCCccc
Q 008128 269 SQALGPCRGGLRFHPSMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDL 348 (577)
Q Consensus 269 s~alGPakGGlRfhp~vt~~evk~LA~~MT~KnAL~gLP~GGaKGGI~~DP~~~s~~Eler~~r~f~~eL~~~IGp~~DV 348 (577)
|+++|||||||||||++|++|+++||++|||||||++||||||||||++||+++|+.|++||||+||++|.+||||++||
T Consensus 105 n~a~GPakGGiR~hp~v~~~ev~~La~~mt~KnAl~~lP~GGgKGgi~~DPk~~S~~El~r~~r~f~~~L~~~iGp~~Dv 184 (470)
T 2bma_A 105 NSALGPYKGGLRFHPSVNLSIVKFLGFEQIFKNSLTGLSMGGGKGGSDFDPKGKSDNEILKFCQAFMNELYRHIGPCTDV 184 (470)
T ss_dssp ECSSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHHTCSSCEEEEEEESCCCTTCCHHHHHHHHHHHHHHHGGGCBTTTEE
T ss_pred CCCCCCCCCCeEeeCCCCHHHHHHHHHHHHHHHHhcCCCCCCcceEEeCCCCcCCHHHHHHHHHHHHHHhhhccCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcCChhHHHHHHHHhhhhhCCccccccCccccccCCCCCCCcchHHHHHHHHHHHHHcCCCCCCceEEEEecchHH
Q 008128 349 PSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIA 428 (577)
Q Consensus 349 papDvGt~~~em~~i~~~y~~~~g~~~g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG 428 (577)
|||||||+++||+||+++|+++++++.|++||||+.+|||.+|++||||||+++++++++++|.+++|+||+||||||||
T Consensus 185 pApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~~~~~l~~~G~~l~g~~vaVqG~GnVG 264 (470)
T 2bma_A 185 PAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYFVLEVLKSLNIPVEKQTAVVSGSGNVA 264 (470)
T ss_dssp EECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHTTTCCGGGCEEEEECSSHHH
T ss_pred cCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHHHHHHHHhccCCcCCCEEEEECCcHHH
Confidence 99999999999999999999999998899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhc-CcccccccccCCceEeCCCCccccccceeecCCc
Q 008128 429 MHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQ-RSLRDYSKTYARSKYYDEAKPWNERCDVAFPCAS 507 (577)
Q Consensus 429 ~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~-g~l~~y~~~~p~a~~i~~~eil~~~cDIlIPcA~ 507 (577)
+++|++|++.|+|||+|||++|+||||+|||.+++..|+++|+.+ +++.+|.+.+|++++++++++|+++||||+|||+
T Consensus 265 ~~~a~~L~~~GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a~~v~~~~~~~~~~DI~iPcA~ 344 (470)
T 2bma_A 265 LYCVQKLLHLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYFPNEKPWGVPCTLAFPCAT 344 (470)
T ss_dssp HHHHHHHHHTTCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEECSSCCTTSSCCSEEEECSS
T ss_pred HHHHHHHHHCCCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEEecCcCeeecCccEEEeccc
Confidence 999999999999999999999999999999999998899999876 7999998778889999988999999999999999
Q ss_pred ccccchhhHhhhhccCceEEEecCCCCCCHHHHHHHHhCCcEEecchhccccceeehhhhhccc
Q 008128 508 QNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVRYSIFYSTCF 571 (577)
Q Consensus 508 ~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI~viPD~~aNAGGVivS~~Ev~~~ 571 (577)
+|+||.+||++|++++||+|+||||+|+||+|+++|+++||+|+||+++|||||++||||+..+
T Consensus 345 ~~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA~~~L~~rGIl~~PD~~aNAGGV~~S~~E~~qn 408 (470)
T 2bma_A 345 QNDVDLDQAKLLQKNGCILVGEGANMPSTVDAINLFKSNNIIYCPSKAANAGGVAISGLEMSQN 408 (470)
T ss_dssp TTCBCSHHHHHHHHTTCCEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHH
T ss_pred cCcCCHHHHHHHHhcCcEEEEeCCCCCCCHHHHHHHHHCCcEEEChHHhhCCCceeeHHHhhcc
Confidence 9999999999999999999999999999999999999999999999999999999999999754
No 4
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=100.00 E-value=3.7e-113 Score=920.15 Aligned_cols=378 Identities=43% Similarity=0.821 Sum_probs=364.3
Q ss_pred hHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhCccchH--HHHhhcCCCeEEEEEEeEECCCCceEEEEEEEEEec
Q 008128 192 TAGSIVEAALKRDPHEIEFIQSVQESLHALERVIAKNSHYVN--IMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFS 269 (577)
Q Consensus 192 ~~~~~~~~~~~~~~~~~ef~qav~~~~~~~~~~~~~~p~y~~--~le~l~~Per~i~~rvp~~dd~G~~~v~~GyRVqhs 269 (577)
.++.+++++.+|+|+|++|+|++++++++++++|+.+|+|.+ ++++|++|+|+|+|+|||+||+|++++|+|||||||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Per~i~~~vp~~~d~G~~~v~~G~rv~hn 82 (449)
T 1bgv_A 3 YVDRVIAEVEKKYADEPEFVQTVEEVLSSLGPVVDAHPEYEEVALLERMVIPERVIEFRVPWEDDNGKVHVNTGYRVQFN 82 (449)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTTHHHHHTCHHHHHTTHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred HHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHhccChhhhhhhHHHHhcCCceEEEEEEEEEeCCCCEEEEeEEEEEEc
Confidence 467899999999999999999999999999999999999996 999999999999999999999999999999999999
Q ss_pred CCCCCCCCCeeeecCCCHHHHHHHhHHhHHhhhccCCCCCCceEEEecCCCCCCHHHHHHHHHHHHHHHhhhcCCCcccC
Q 008128 270 QALGPCRGGLRFHPSMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLP 349 (577)
Q Consensus 270 ~alGPakGGlRfhp~vt~~evk~LA~~MT~KnAL~gLP~GGaKGGI~~DP~~~s~~Eler~~r~f~~eL~~~IGp~~DVp 349 (577)
+++|||||||||||++|++|+++||++|||||||++||+|||||||++||+++|+.|++||||+||++|.+||||++|||
T Consensus 83 ~~~GPakGGlR~~p~v~~~ev~~La~~mt~KnAl~~lP~GGgKGGi~~dP~~~s~~e~~r~~r~f~~~L~~~ig~~~dvp 162 (449)
T 1bgv_A 83 GAIGPYKGGLRFAPSVNLSIMKFLGFEQAFKDSLTTLPMGGAKGGSDFDPNGKSDREVMRFCQAFMTELYRHIGPDIDVP 162 (449)
T ss_dssp CSSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHHTSSSCCEEEEEESCCCTTCCHHHHHHHHHHHHHHHGGGCBTTTEEE
T ss_pred CCcCCCCCCeeecCCCCHHHHHHHHHHHHHHHHhhCCCCCCccEEEECCCccCCHHHHHHHHHHHHHHhhheeCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcCChhHHHHHHHHhhhhhCCc-cccccCccccccCCCCCCCcchHHHHHHHHHHHHHcCCCCCCceEEEEecchHH
Q 008128 350 SEEMGVGTREMGYLFGQYRRLAGHF-QGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIA 428 (577)
Q Consensus 350 apDvGt~~~em~~i~~~y~~~~g~~-~g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG 428 (577)
|||+||+++||+||+++|+++++.+ .|++||||+.+|||.+|+++|||||+++++++++++|.+++|+||+||||||||
T Consensus 163 A~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~G~~l~g~~v~VqG~GnVG 242 (449)
T 1bgv_A 163 AGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVYYVEAVMKHENDTLVGKTVALAGFGNVA 242 (449)
T ss_dssp ECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCSTTCEEEECCSSHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHHHHHHHHHHccCCcCCCEEEEECCCHHH
Confidence 9999999999999999999999876 499999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCeEEEEEcCCCeeeCCCCC-CHHhHhHHHHHHhhc-CcccccccccCCceEeCCCCccccccceeecCC
Q 008128 429 MHVLEKLIAYGAIPVSVSDAKGYLVDEDGF-DYMKISFLRDIKSQQ-RSLRDYSKTYARSKYYDEAKPWNERCDVAFPCA 506 (577)
Q Consensus 429 ~~aA~~L~e~GAkVVaISDs~G~Iydp~GL-D~e~L~~l~~~k~~~-g~l~~y~~~~p~a~~i~~~eil~~~cDIlIPcA 506 (577)
+++|++|++.|+|||+|||++|+||||+|| |.+++..|+++|+.+ +++.+|...+ ++++++++++|+++||||+|||
T Consensus 243 ~~~a~~L~~~GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y~~~~-~a~~i~~~e~~~~~~Dil~P~A 321 (449)
T 1bgv_A 243 WGAAKKLAELGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKF-GVQFFPGEKPWGQKVDIIMPCA 321 (449)
T ss_dssp HHHHHHHHHHTCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHH-TCEEEETCCGGGSCCSEEECCS
T ss_pred HHHHHHHHHCCCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhccccc-CCEEeCchhhhcCCcceeeccc
Confidence 999999999999999999999999999999 887777789998876 7898885544 5788888889999999999999
Q ss_pred cccccchhhHhhhhccCceEEEecCCCCCCHHHHHHHHhC-CcEEecchhccccceeehhhhhcc
Q 008128 507 SQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKA-NVLIAPAMAAGAGGVRYSIFYSTC 570 (577)
Q Consensus 507 ~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~r-GI~viPD~~aNAGGVivS~~Ev~~ 570 (577)
++|+||.+||++|..++||+|+||||+|+||+|+++|+++ ||+|+||+++|||||++||||+..
T Consensus 322 ~~~~I~~~na~~l~a~g~kiV~EgAN~p~T~eA~~~l~~~~Gi~~~PD~~aNaGGV~~S~~E~~q 386 (449)
T 1bgv_A 322 TQNDVDLEQAKKIVANNVKYYIEVANMPTTNEALRFLMQQPNMVVAPSKAVNAGGVLVSGFEMSQ 386 (449)
T ss_dssp CTTCBCHHHHHHHHHTTCCEEECCSSSCBCHHHHHHHHHCTTCEEECHHHHTTHHHHHHHHHHHH
T ss_pred cccccchhhHHHHHhcCCeEEEeCCCCcCCHHHHHHHHHcCCEEEEChHHhcCCCceeehhhhhc
Confidence 9999999999999888899999999999999999999999 999999999999999999999974
No 5
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=100.00 E-value=1.7e-110 Score=893.60 Aligned_cols=350 Identities=29% Similarity=0.466 Sum_probs=338.9
Q ss_pred ccHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEECCCCceEEEEEEEEEecCCCCCCCCCeeeecCCCH
Q 008128 208 IEFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPSMNL 287 (577)
Q Consensus 208 ~ef~qav~~~~~~~~~~~~~~p~y~~~le~l~~Per~i~~rvp~~dd~G~~~v~~GyRVqhs~alGPakGGlRfhp~vt~ 287 (577)
..++++++++++.+++.++.+|. ++++|++|+|+++|+|||+||+|++++|+|||||||+++|||||||||||++|+
T Consensus 15 ~~~~~~~~~~~~~a~~~~~~~~~---~~~~l~~p~r~~~~~vp~~~d~G~~~v~~GyRvqhn~a~GP~kGGiR~~p~v~~ 91 (424)
T 3k92_A 15 LNLFLSTQTIIKEALRKLGYPGD---MYELMKEPQRMLTVRIPVKMDNGSVKVFTGYRSQHNDAVGPTKGGVRFHPEVNE 91 (424)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHH---HHHHHSSCSEEEEEEEEEECTTSCEEEEEEEEEECCCSSSSEECCEEEETTCCH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHH---HHHHhcCCCeEEEEEEEEEecCCcEEEEEEEEEEECCcCCCCCCCeEecCCCCH
Confidence 46899999999999999999987 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHhHHhhhccCCCCCCceEEEecCCCCCCHHHHHHHHHHHHHHHhhhcCCCcccCCCCCcCChhHHHHHHHHh
Q 008128 288 SIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQY 367 (577)
Q Consensus 288 ~evk~LA~~MT~KnAL~gLP~GGaKGGI~~DP~~~s~~Eler~~r~f~~eL~~~IGp~~DVpapDvGt~~~em~~i~~~y 367 (577)
+|+++||++|||||||++||||||||||++||+++|+.|+|||||+|+++|.++|||++|||||||||+++||+||+++|
T Consensus 92 ~ev~~La~~mt~KnAl~~lP~GGgKggi~~DP~~~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y 171 (424)
T 3k92_A 92 EKVKALSIWMTLKCGIANLPYGGGKGGIICDPRTMSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEY 171 (424)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCEEEEEEEECCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcceEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhCCcc-ccccCccccccCCCCCCCcchHHHHHHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEE
Q 008128 368 RRLAGHFQ-GSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 368 ~~~~g~~~-g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaIS 446 (577)
++++|.+. +++||||+.+|||.+|+++|||||++++++++++++.+++|+||+||||||||+++|++|++.|+|||+||
T Consensus 172 ~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavs 251 (424)
T 3k92_A 172 SRLREFDSPGFITGKPLVLGGSQGRETATAQGVTICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGIS 251 (424)
T ss_dssp HHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHhCCCCcceeecccccCCCcCCCcccHHHHHHHHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
Confidence 99999874 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCccccccceeecCCcccccchhhHhhhhccCceE
Q 008128 447 DAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRI 526 (577)
Q Consensus 447 Ds~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil~~~cDIlIPcA~~n~It~enA~~l~~~~aki 526 (577)
|++|+||||+|||+++| ++++++++++.+| | +++++++++|+.+||||+|||++|+||.+||++| +||+
T Consensus 252 D~~G~iyd~~GlD~~~l---~~~~~~~g~i~~~----~-a~~~~~~~i~~~~~DIliPcA~~n~I~~~~a~~l---~ak~ 320 (424)
T 3k92_A 252 DANGGLYNPDGLDIPYL---LDKRDSFGMVTNL----F-TDVITNEELLEKDCDILVPAAISNQITAKNAHNI---QASI 320 (424)
T ss_dssp CSSCEEECTTCCCHHHH---HHHCCSSSCCGGG----C-SCCBCHHHHHHSCCSEEEECSCSSCBCTTTGGGC---CCSE
T ss_pred CCCCcEECCCCCCHHHH---HHHHHHhCCCCCC----C-cEEecCccceeccccEEeecCcccccChhhHhhc---CceE
Confidence 99999999999999885 7788888898876 4 7778888999999999999999999999999999 9999
Q ss_pred EEecCCCCCCHHHHHHHHhCCcEEecchhccccceeehhhhhccc
Q 008128 527 LVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVRYSIFYSTCF 571 (577)
Q Consensus 527 VvEgAN~p~T~eA~~iL~~rGI~viPD~~aNAGGVivS~~Ev~~~ 571 (577)
|+||||+|+||+|+++|++|||+|+||+++|||||++||||+.-+
T Consensus 321 V~EgAN~p~t~eA~~iL~~rGI~~~PD~~aNAGGV~vS~~E~~qn 365 (424)
T 3k92_A 321 VVERANGPTTIDATKILNERGVLLVPDILASAGGVTVSYFEWVQN 365 (424)
T ss_dssp EECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHH
T ss_pred EEcCCCCCCCHHHHHHHHHCCCEEECchHhcCCCEEeehhHHHhc
Confidence 999999999999999999999999999999999999999999643
No 6
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=100.00 E-value=1.2e-109 Score=897.88 Aligned_cols=360 Identities=27% Similarity=0.486 Sum_probs=339.4
Q ss_pred CCCccHHHHHHHHHHHHHHHHHh---------------CccchHHHHhhcCCCeEEEEEEeEECCCCceEEEEEEEEEec
Q 008128 205 PHEIEFIQSVQESLHALERVIAK---------------NSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFS 269 (577)
Q Consensus 205 ~~~~ef~qav~~~~~~~~~~~~~---------------~p~y~~~le~l~~Per~i~~rvp~~dd~G~~~v~~GyRVqhs 269 (577)
..+|.|+++|..++++.+.+++. .+.|..++++|++|+|+|+|+|||+||+|++++|+|||||||
T Consensus 4 ~~~~~f~~~v~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~p~r~i~~~vp~~~D~G~~~v~~GyRvqhn 83 (501)
T 3mw9_A 4 EDDPNFFKMVEGFFDRGASIVEDKLVEDLKTRETEEQKRNRVRSILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHS 83 (501)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHHHHCCCTTCSSHHHHHHHHHHHHHSSCSEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCChhhhhhhhHHHHHHHhCCCeEEEEEEEEEeCCCCEEEeeeEEEEEC
Confidence 45789999999999999988774 345778999999999999999999999999999999999999
Q ss_pred CCCCCCCCCeeeecCCCHHHHHHHhHHhHHhhhccCCCCCCceEEEecCCCCCCHHHHHHHHHHHHHHHhh--hcCCCcc
Q 008128 270 QALGPCRGGLRFHPSMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHR--YLGPDKD 347 (577)
Q Consensus 270 ~alGPakGGlRfhp~vt~~evk~LA~~MT~KnAL~gLP~GGaKGGI~~DP~~~s~~Eler~~r~f~~eL~~--~IGp~~D 347 (577)
+++|||||||||||+||++|+++||++|||||||++||||||||||++||+++|+.|+||+||+||++|.+ ||||++|
T Consensus 84 ~a~GP~kGGiR~hp~v~l~ev~~La~~MT~KnAl~~LP~GGgKGgi~~DPk~~s~~El~r~~r~f~~eL~~~~~IGp~~d 163 (501)
T 3mw9_A 84 QHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGVD 163 (501)
T ss_dssp CSSSSEECCEEECTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEECSCGGGSCHHHHHHHHHHHHHHHHHTTSCBTTTE
T ss_pred CCcCCCCCCeeecCCCCHHHHHHHHHHHHHHHHhcCCCCCCcceEEecCCccCCHHHHHHHHHHHHHHHhhccCCCCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999996 9999999
Q ss_pred cCCCCCcCChhHHHHHHHHhhhhhCCc----cccccCccccccCCCCCCCcchHHHHHHHHHHHH------HcCC--CCC
Q 008128 348 LPSEEMGVGTREMGYLFGQYRRLAGHF----QGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILA------DMNK--ELK 415 (577)
Q Consensus 348 VpapDvGt~~~em~~i~~~y~~~~g~~----~g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~------~~g~--~l~ 415 (577)
||||||||+++||+||+++|+++.|.. .+++||||+.+|||++|++||||||+++++++++ .+|. +|+
T Consensus 164 ipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eATg~GV~~~~~~~l~~~~~~~~~G~~~~l~ 243 (501)
T 3mw9_A 164 VPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFG 243 (501)
T ss_dssp ECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHTCHHHHHHTTCCSSST
T ss_pred EecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCchHHHHHHHHHHHHhhhHHHHHcCCCCCcC
Confidence 999999999999999999999999975 5899999999999999999999999999998664 4674 689
Q ss_pred CceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCcc
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW 495 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil 495 (577)
|+||+||||||||+++|++|++.|+|||+|||++|+||||+|||+++| .++|+.++++.+| |+++++++ ++|
T Consensus 244 g~tVaVQG~GNVG~~aa~~L~e~GakVVavsDs~G~iyd~~Gid~~~l---~~~k~~~g~i~~~----~~a~~~~~-~il 315 (501)
T 3mw9_A 244 DKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKEL---EDFKLQHGTILGF----PKAKIYEG-SIL 315 (501)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHH---HHHHHHHSSSTTC----TTSEEECS-CGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHH---HHHHHhcCCeecc----cCceeecc-ccc
Confidence 999999999999999999999999999999999999999999999886 6677778888765 88888864 899
Q ss_pred ccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHHHhCCcEEecchhccccceeehhhhhccccCcc
Q 008128 496 NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVRYSIFYSTCFLDAF 575 (577)
Q Consensus 496 ~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI~viPD~~aNAGGVivS~~Ev~~~~~~~ 575 (577)
+++||||+|||++|+||.+||++| +||+||||||+|+||+|+++|+++||+|+||+++|||||++||||+.-++--+
T Consensus 316 ~~~~DIliPcA~~n~I~~~na~~l---~akiV~EgAN~p~T~eA~~iL~~rGIl~~PD~~aNAGGV~vSy~E~~qn~~~~ 392 (501)
T 3mw9_A 316 EVDCDILIPAASEKQLTKSNAPRV---KAKIIAEGANGPTTPEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLNNLNHV 392 (501)
T ss_dssp GSCCSEEEECSSSCCBCTTTGGGC---CCSEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHCS
T ss_pred cccceEEeeccccCccCHhHHHHc---CceEEEeCCCCcCCHHHHHHHHHCCCEEEChHHhcCchHHhhHHHHHhccccc
Confidence 999999999999999999999999 99999999999999999999999999999999999999999999998766433
No 7
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=100.00 E-value=6e-109 Score=885.65 Aligned_cols=352 Identities=30% Similarity=0.472 Sum_probs=340.9
Q ss_pred CccHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEECCCCceEEEEEEEEEecCCCCCCCCCeeeecCCC
Q 008128 207 EIEFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPSMN 286 (577)
Q Consensus 207 ~~ef~qav~~~~~~~~~~~~~~p~y~~~le~l~~Per~i~~rvp~~dd~G~~~v~~GyRVqhs~alGPakGGlRfhp~vt 286 (577)
++.|+|++++++++++++|+.+|+ ++++|++|+|+++|+|||+||+|++++|+|||||||+++|||||||||||++|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~P~r~i~~~~p~~~D~G~~~~~~G~rvqhn~a~GPakGGiR~~p~v~ 104 (440)
T 3aog_A 28 DGGPWEIFTEQVDRVVPYLGRLAP---LAESLKRPKRVLIVDVPVRLDDGSVAYFEGYRVHHNTARGPAKGGVRYHPEVT 104 (440)
T ss_dssp CCTHHHHHHHHHHHHGGGCGGGGG---GGGGGGSCSEEEEEEEEEECTTSCEEEEEEEEEEEECTTSSEECCEEECTTCC
T ss_pred CCCHHHHHHHHHHHHHHHhCCCHH---HHHHhcCCCeEEEEEEEEEecCCCEEEEEEEEEEECCCCCCCcCCeEEEecCC
Confidence 378999999999999999999998 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHhHHhhhccCCCCCCceEEEecCCCCCCHHHHHHHHHHHHHHHhhhcCCCcccCCCCCcCChhHHHHHHHH
Q 008128 287 LSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQ 366 (577)
Q Consensus 287 ~~evk~LA~~MT~KnAL~gLP~GGaKGGI~~DP~~~s~~Eler~~r~f~~eL~~~IGp~~DVpapDvGt~~~em~~i~~~ 366 (577)
++|+++||++|||||||++||||||||||++||+++|+.|+|||||+|+++|.++|||++||||||+||+++||+||+++
T Consensus 105 ~~ev~~La~~mt~KnAl~~lP~GGgKGgi~~dP~~~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~ 184 (440)
T 3aog_A 105 LSEVMALAGWMTIKNAAVGLPYGGGKGGIRVDPRKLSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTGEREMAWMMDT 184 (440)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSCCEEEEEEECCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcceEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhCCc-cccccCccccccCCCCCCCcchHHHHHHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEE
Q 008128 367 YRRLAGHF-QGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 367 y~~~~g~~-~g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaI 445 (577)
|++++|++ .+++||||+.+|||.+|++||||||+++++++++++|.+++|+||+||||||||+++|++|.+.|+|||+|
T Consensus 185 y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVav 264 (440)
T 3aog_A 185 YSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGVFITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDHGARVVAV 264 (440)
T ss_dssp HHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHHHHHHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHhhCCCCCCeEeccchhhCCCCCCCcchHHHHHHHHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEE
Confidence 99999986 59999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCccccccceeecCCcccccchhhHhhhhccCce
Q 008128 446 SDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCR 525 (577)
Q Consensus 446 SDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil~~~cDIlIPcA~~n~It~enA~~l~~~~ak 525 (577)
||++|+||||+|||+++| .++++.++++.+| +++++++++++|+.+||||+|||++|+||.+||++| +||
T Consensus 265 sD~~G~i~dp~Gld~~~l---~~~~~~~g~i~~y----~~a~~i~~~ei~~~~~DIlvPcA~~n~i~~~na~~l---~ak 334 (440)
T 3aog_A 265 QDHTGTVYNEAGIDPYDL---LRHVQEFGGVRGY----PKAEPLPAADFWGLPVEFLVPAALEKQITEQNAWRI---RAR 334 (440)
T ss_dssp ECSSCEEECTTCCCHHHH---HHHHHHTSSSTTC----TTSEECCHHHHTTCCCSEEEECSSSSCBCTTTGGGC---CCS
T ss_pred EcCCcEEECCCCCCHHHH---HHHHHhcCCcccC----CCceEcCchhhhcCCCcEEEecCCcCccchhhHHHc---CCc
Confidence 999999999999999886 6677778888876 678888888899999999999999999999999999 999
Q ss_pred EEEecCCCCCCHHHHHHHHhCCcEEecchhccccceeehhhhhccc
Q 008128 526 ILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVRYSIFYSTCF 571 (577)
Q Consensus 526 iVvEgAN~p~T~eA~~iL~~rGI~viPD~~aNAGGVivS~~Ev~~~ 571 (577)
+|+||||+|+||+|+++|+++||+|+||+++|||||++||||+.-+
T Consensus 335 ~VvEgAN~p~t~eA~~iL~~~GI~~~PD~~aNaGGV~vS~~E~~qN 380 (440)
T 3aog_A 335 IVAEGANGPTTPAADDILLEKGVLVVPDVIANAGGVTVSYFEWVQD 380 (440)
T ss_dssp EEECCSSSCBCHHHHHHHHHHTCEEECHHHHTTHHHHHHHHHHHHH
T ss_pred EEEecCccccCHHHHHHHHHCCCEEEChHHHhCCCceEEEEEEEec
Confidence 9999999999999999999999999999999999999999999543
No 8
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=100.00 E-value=4.1e-108 Score=875.45 Aligned_cols=348 Identities=26% Similarity=0.423 Sum_probs=335.7
Q ss_pred CCCccHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEECCCCceEEEEEEEEEecCCCCCCCCCeeeecC
Q 008128 205 PHEIEFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPS 284 (577)
Q Consensus 205 ~~~~ef~qav~~~~~~~~~~~~~~p~y~~~le~l~~Per~i~~rvp~~dd~G~~~v~~GyRVqhs~alGPakGGlRfhp~ 284 (577)
+..+.|+|++++++++++++|+.+|+ ++++|++|+|+++|++||+||+|++++|+|||||||+++|||||||||||+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~P~r~i~~~~p~~~D~G~~~~~~g~rv~hn~~~GPakGGiR~~p~ 85 (419)
T 3aoe_E 9 PEDPGLWDTYLEWLERALKVAGVHPT---TLEYLAHPKRLVTLSLPVVMDDGKVRIFQGYRVVHDIARGPAKGGVRLDPG 85 (419)
T ss_dssp SSCCHHHHHHHHHHHHHHTTSCCCHH---HHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEECSSSSEEEEEEECTT
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCHH---HHhhcCCCCeEEEEEEEEEecCCCEEEEEEEEEEECCCCCCCcCCeEecCC
Confidence 45567999999999999999999998 999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHhHHhHHhhhccCCCCCCceEEEecCCCCCCHHHHHHHHHHHHHHHhhhcCCCcccCCCCCcCChhHHHHHH
Q 008128 285 MNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLF 364 (577)
Q Consensus 285 vt~~evk~LA~~MT~KnAL~gLP~GGaKGGI~~DP~~~s~~Eler~~r~f~~eL~~~IGp~~DVpapDvGt~~~em~~i~ 364 (577)
+|++|+++||++|||||||++||||||||||++||+++|+.|+|||||+|+++|.++|||++||||||+||+++||+||+
T Consensus 86 v~~~ev~~La~~mt~KnAl~~lP~GGgKGgi~~dP~~~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~ 165 (419)
T 3aoe_E 86 VTLGQTAGLAAWMTLKAAVYDLPFGGAAGGIAVDPKGLSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIM 165 (419)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCSCEEEEEEECSCGGGSCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhccCCCCCccEEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhCCc-cccccCccccccCCCCCCCcchHHHHHHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEE
Q 008128 365 GQYRRLAGHF-QGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPV 443 (577)
Q Consensus 365 ~~y~~~~g~~-~g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVV 443 (577)
++|+++++++ .+++||||+.+|||.+|+++|||||++++++++++++.+++|+||+||||||||+++|++|++.|+|||
T Consensus 166 ~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVV 245 (419)
T 3aoe_E 166 DTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGALLVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAERLGMRVV 245 (419)
T ss_dssp HHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHHHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHCCCEEE
Confidence 9999999986 599999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCccccccceeecCCcccccchhhHhhhhccC
Q 008128 444 SVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSG 523 (577)
Q Consensus 444 aISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil~~~cDIlIPcA~~n~It~enA~~l~~~~ 523 (577)
+|||++|+||||+|||+++| .++++.++++.+| .++++++|..+||||+|||++|+||.+||++| +
T Consensus 246 avsD~~G~i~dp~Gld~~~l---~~~~~~~g~v~~~--------~~~~~e~~~~~~DVliP~A~~n~i~~~~A~~l---~ 311 (419)
T 3aoe_E 246 AVATSMGGMYAPEGLDVAEV---LSAYEATGSLPRL--------DLAPEEVFGLEAEVLVLAAREGALDGDRARQV---Q 311 (419)
T ss_dssp EEEETTEEEECTTCCCHHHH---HHHHHHHSSCSCC--------CBCTTTGGGSSCSEEEECSCTTCBCHHHHTTC---C
T ss_pred EEEcCCCeEECCCCCCHHHH---HHHHHhhCCccee--------eccchhhhccCceEEEecccccccccchHhhC---C
Confidence 99999999999999999886 6667777888766 24567899999999999999999999999999 9
Q ss_pred ceEEEecCCCCCCHHHHHHHHhCCcEEecchhccccceeehhhhhc
Q 008128 524 CRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVRYSIFYST 569 (577)
Q Consensus 524 akiVvEgAN~p~T~eA~~iL~~rGI~viPD~~aNAGGVivS~~Ev~ 569 (577)
||+|+||||+|+||+|+++|++|||+|+||+++|||||++||||+.
T Consensus 312 ak~V~EgAN~p~t~~A~~~L~~~Gi~~~PD~~aNaGGV~~S~~E~~ 357 (419)
T 3aoe_E 312 AQAVVEVANFGLNPEAEAYLLGKGALVVPDLLSGGGGLLASYLEWV 357 (419)
T ss_dssp CSEEEECSTTCBCHHHHHHHHHHTCEEECHHHHTCHHHHHHHHHHH
T ss_pred ceEEEECCCCcCCHHHHHHHHHCCCEEECHHHHhCCCchhhHHHHh
Confidence 9999999999999999999999999999999999999999999995
No 9
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=100.00 E-value=2e-107 Score=871.34 Aligned_cols=348 Identities=25% Similarity=0.475 Sum_probs=319.9
Q ss_pred cHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEECCCCceEEEEEEEEEecCCCCCCCCCeeeecCCCHH
Q 008128 209 EFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPSMNLS 288 (577)
Q Consensus 209 ef~qav~~~~~~~~~~~~~~p~y~~~le~l~~Per~i~~rvp~~dd~G~~~v~~GyRVqhs~alGPakGGlRfhp~vt~~ 288 (577)
.|+|++++++++++++|+.+|. ++++|++|+|+++|++||+||+|++++|+|||||||+++|||||||||||++|++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~p~r~i~~~~p~~~d~G~~~~~~g~rv~hn~~~GP~kGGiR~~p~v~~~ 82 (421)
T 2yfq_A 6 NPLVAAQEKVRIACEKLGCDPA---VYELLKEPQRVIEISIPVKMDDGTVKVFKGWRSAHSSAVGPSKGGVRFHPNVNMD 82 (421)
T ss_dssp CHHHHHHHHHHHHHHHHTCCHH---HHHHHSSCSEEEEEEEEEEETTTEEEEEEEEEEECCCSSSSEEEEEEEESSCCHH
T ss_pred CHHHHHHHHHHHHHHHhCCCHH---HHhhccCCceEEEEEEEEEecCCCEEEEEEEEEEECCCCCCCcCCEEeeCCCCHH
Confidence 5899999999999999999996 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHhHHhhhccCCCCCCceEEEecCCCCCCHHHHHHHHHHHHHHHhhhcCCCcccCCCCCcCChhHHHHHHHHhh
Q 008128 289 IAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYR 368 (577)
Q Consensus 289 evk~LA~~MT~KnAL~gLP~GGaKGGI~~DP~~~s~~Eler~~r~f~~eL~~~IGp~~DVpapDvGt~~~em~~i~~~y~ 368 (577)
|+++||++|||||||++||||||||||++||+++|+.|+|||||+|+++|.++|||++||||||+||+++||+||+++|+
T Consensus 83 ev~~La~~mt~KnAl~~lP~GGgKggi~~dP~~~s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~ 162 (421)
T 2yfq_A 83 EVKALSLWMTFKGGALGLPYGGGKGGICVDPAELSERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYV 162 (421)
T ss_dssp HHHHHHHHHHHHHHHHTCSCEEEEEEEECCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCcceEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCc--cccccCccccccCCCCCCCcchHHHHHHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEE
Q 008128 369 RLAGHF--QGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 369 ~~~g~~--~g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaIS 446 (577)
++++++ ++++||||+.+|||.+|+++|||||+++++++++++|.+++|+||+||||||||+++|++|++.|+|||+||
T Consensus 163 ~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavs 242 (421)
T 2yfq_A 163 KLNGERMDIGTFTGKPVAFGGSEGRNEATGFGVAVVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIA 242 (421)
T ss_dssp HHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHHHHHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECC
T ss_pred HhhCCCCCCCEEecCchhcCCCCCCCcchHHHHHHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEE
Confidence 999985 599999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCC-----CeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCccccccceeecCCcccccchhhHhhhhc
Q 008128 447 DAK-----GYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVN 521 (577)
Q Consensus 447 Ds~-----G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil~~~cDIlIPcA~~n~It~enA~~l~~ 521 (577)
|++ |+||||+|||+++| .++++.++++.+| +++++++++++|+.+||||+|||++|+||.+||.+|
T Consensus 243 D~~~~~~~G~i~d~~Gld~~~l---~~~~~~~g~i~~~----~~a~~i~~~~~~~~~~DIliP~A~~n~i~~~~A~~l-- 313 (421)
T 2yfq_A 243 EWDRNEGNYALYNENGIDFKEL---LAYKEANKTLIGF----PGAERITDEEFWTKEYDIIVPAALENVITGERAKTI-- 313 (421)
T ss_dssp BCCSSSCSBCCBCSSCCCHHHH---HHHHHHHCC-------------------------CEEECSCSSCSCHHHHTTC--
T ss_pred ecCCCccceEEECCCCCCHHHH---HHHHHhcCCcccC----CCceEeCccchhcCCccEEEEcCCcCcCCcccHHHc--
Confidence 999 99999999999886 6677778888876 678888888999999999999999999999999999
Q ss_pred cCceEEEecCCCCCCHHHHHHHHhCCcEEecchhccccceeehhhhhc
Q 008128 522 SGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVRYSIFYST 569 (577)
Q Consensus 522 ~~akiVvEgAN~p~T~eA~~iL~~rGI~viPD~~aNAGGVivS~~Ev~ 569 (577)
+||+|+||||+|+||+|+++|+++||+|+||+++|||||++||||+.
T Consensus 314 -~ak~VvEgAN~P~t~ea~~il~~~GI~~~Pd~~aNaGGV~vS~~E~~ 360 (421)
T 2yfq_A 314 -NAKLVCEAANGPTTPEGDKVLTERGINLTPDILTNSGGVLVSYYEWV 360 (421)
T ss_dssp -CCSEEECCSSSCSCHHHHHHHHHHTCEEECHHHHTTHHHHHHHHHHH
T ss_pred -CCeEEEeCCccccCHHHHHHHHHCCCEEEChHHHhCCCeEEEEEEEE
Confidence 99999999999999999999999999999999999999999999985
No 10
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=100.00 E-value=2.1e-105 Score=854.05 Aligned_cols=350 Identities=29% Similarity=0.490 Sum_probs=338.7
Q ss_pred CccHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEECCCCceEEEEEEEEEecCCCCCCCCCeeeecCCC
Q 008128 207 EIEFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPSMN 286 (577)
Q Consensus 207 ~~ef~qav~~~~~~~~~~~~~~p~y~~~le~l~~Per~i~~rvp~~dd~G~~~v~~GyRVqhs~alGPakGGlRfhp~vt 286 (577)
++.|+|++++++++++++|+.+|+ ++++|.+|+|+|+|++||+||+|++++|+|||||||+++|||||||||||++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~P~r~i~~~~p~~~D~G~~~~~~g~rv~~~~~~GpakGGiR~~p~v~ 78 (415)
T 2tmg_A 2 EKSLYEMAVEQFNRAASLMDLESD---LAEVLRRPKRVLIVEFPVRMDDGHVEVFTGYRVQHNVARGPAKGGIRYHPDVT 78 (415)
T ss_dssp --CHHHHHHHHHHHHHHHTTCCHH---HHHHHHSCSEEEEEEEEEECTTSCEEEEEEEEEEEECTTSSEECCEEEESSCC
T ss_pred CCCHHHHHHHHHHHHHHHhCCCHH---HHHhcCCCCeEEEEEEEEEecCCcEEEEEEEEEEECCCCCCCCCcEEeeCCCC
Confidence 467999999999999999999997 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHhHHhhhccCCCCCCceEEEecCCCCCCHHHHHHHHHHHHHHHhhhcCCCcccCCCCCcCChhHHHHHHHH
Q 008128 287 LSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQ 366 (577)
Q Consensus 287 ~~evk~LA~~MT~KnAL~gLP~GGaKGGI~~DP~~~s~~Eler~~r~f~~eL~~~IGp~~DVpapDvGt~~~em~~i~~~ 366 (577)
++|+++||++|||||||++||+|||||||++||+++|+.|++|+||+|+++|.++|||++||||||+||+++||+||+++
T Consensus 79 ~~ev~~La~~mt~KnAl~~lP~GG~KGgi~~dP~~~s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~ 158 (415)
T 2tmg_A 79 LDEVKALAFWMTWKTAVMNLPFGGGKGGVRVDPKKLSRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDE 158 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSCCEEEEEEECCGGGSCHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcceEEeCCCCCCCHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhCCc-cccccCccccccCCCCCCCcchHHHHHHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHH-CCCeEEE
Q 008128 367 YRRLAGHF-QGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIA-YGAIPVS 444 (577)
Q Consensus 367 y~~~~g~~-~g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e-~GAkVVa 444 (577)
|++++|+. .+++||||+.+|||.+|+++|||||+++++++++++|.+++|+||+||||||||+++|++|.+ +|+|||+
T Consensus 159 y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVa 238 (415)
T 2tmg_A 159 YEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKVCAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQELGSKVVA 238 (415)
T ss_dssp HHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHHHHHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEE
Confidence 99999986 599999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred EEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCccccccceeecCCcccccchhhHhhhhccCc
Q 008128 445 VSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGC 524 (577)
Q Consensus 445 ISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil~~~cDIlIPcA~~n~It~enA~~l~~~~a 524 (577)
|||++|++|||+|||+++| .++++.++++.+| +++++++++++|+.+||||+|||++|+||++||++| +|
T Consensus 239 vsD~~G~i~dp~Gld~~~l---~~~~~~~g~l~~y----~~a~~~~~~eil~~~~DIliP~A~~n~i~~~~a~~l---~a 308 (415)
T 2tmg_A 239 VSDSRGGIYNPEGFDVEEL---IRYKKEHGTVVTY----PKGERITNEELLELDVDILVPAALEGAIHAGNAERI---KA 308 (415)
T ss_dssp EECSSCEEECTTCCCHHHH---HHHHHHSSCSTTC----SSSEEECHHHHTTCSCSEEEECSSTTSBCHHHHTTC---CC
T ss_pred EEeCCCeEECCCCCCHHHH---HHHHHhhCCcccC----CCceEcCchhhhcCCCcEEEecCCcCccCcccHHHc---CC
Confidence 9999999999999999886 6777778888876 678888888899999999999999999999999999 99
Q ss_pred eEEEecCCCCCCHHHHHHHHhCCcEEecchhccccceeehhhhhc
Q 008128 525 RILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVRYSIFYST 569 (577)
Q Consensus 525 kiVvEgAN~p~T~eA~~iL~~rGI~viPD~~aNAGGVivS~~Ev~ 569 (577)
|+|+||||+|+||+|+++|+++||+|+||+++|||||++||||+.
T Consensus 309 k~V~EgAN~p~t~~a~~~l~~~Gi~~~PD~~aNaGGV~~s~~E~v 353 (415)
T 2tmg_A 309 KAVVEGANGPTTPEADEILSRRGILVVPDILANAGGVTVSYFEWV 353 (415)
T ss_dssp SEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTCHHHHHHHHHHH
T ss_pred eEEEeCCCcccCHHHHHHHHHCCCEEEChHHHhCCCceEEEEEEE
Confidence 999999999999999999999999999999999999999999995
No 11
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=100.00 E-value=3.1e-106 Score=861.42 Aligned_cols=352 Identities=26% Similarity=0.422 Sum_probs=337.8
Q ss_pred CccHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEECCCCceEEEEEEEEEecCCCCCCCCCeeeecCCC
Q 008128 207 EIEFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPSMN 286 (577)
Q Consensus 207 ~~ef~qav~~~~~~~~~~~~~~p~y~~~le~l~~Per~i~~rvp~~dd~G~~~v~~GyRVqhs~alGPakGGlRfhp~vt 286 (577)
.+.|+|++++++++++++|+.+|. ++++|.+|+|+|+|++||+||+|++++|+|||||||+++|||||||||||++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~P~r~i~v~~p~~~D~G~~~~~~G~rv~~~~~~GpakGG~R~~p~v~ 79 (421)
T 1v9l_A 3 RTGFLEYVLNYVKKGVELGGFPED---FYKILSRPRRVLIVNIPVRLDGGGFEVFEGYRVQHCDVLGPYKGGVRFHPEVT 79 (421)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCHH---HHHHHHSCSEEEEEEEEEECSSSCEEEEEEEEEEEECSSSSEEEEEECCTTCC
T ss_pred CCCHHHHHHHHHHHHHHHhCCCHH---HHHhccCCceEEEEEEEEEecCCcEEEEEEEEeecCCcCCCccccEEecCCCC
Confidence 356999999999999999999996 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHhHHhhhccCCCCCCceEEEecCCCCCCHHHHHHHHHHHHHHHhhhcCCCcccCCCCCcCChhHHHHHHHH
Q 008128 287 LSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQ 366 (577)
Q Consensus 287 ~~evk~LA~~MT~KnAL~gLP~GGaKGGI~~DP~~~s~~Eler~~r~f~~eL~~~IGp~~DVpapDvGt~~~em~~i~~~ 366 (577)
++|+++||++|||||||++||+|||||||++||+++|+.|++||||+|+++|.++|||++||||||+||+++||+||+++
T Consensus 80 ~~ev~~La~~mt~KnAl~~lP~GG~KGgi~~dP~~~s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~~~~m~~~~~~ 159 (421)
T 1v9l_A 80 LADDVALAILMTLKNSLAGLPYGGAKGAVRVDPKKLSQRELEELSRGYARAIAPLIGDVVDIPAPDVGTNAQIMAWMVDE 159 (421)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSCCEEEEEECSCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCCcceEEeCCCCCCCHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhCCc-cccccCccccccCCCCCCCcchHHHHHHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEE
Q 008128 367 YRRLAGHF-QGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 367 y~~~~g~~-~g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaI 445 (577)
|++++++. .+++||||+.+|||.+|+++|||||+++++++++++|.+++|+||+||||||||+++|++|++.|+|||+|
T Consensus 160 y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVav 239 (421)
T 1v9l_A 160 YSKIKGYNVPGVFTSKPPELWGNPVREYATGFGVAVATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAV 239 (421)
T ss_dssp HHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHHHHHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHhCCCCCCeEeccchhhCCCCCcccchHHHHHHHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEE
Confidence 99999986 59999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCeeeCCCCCCHHhHhHHHHHHhhcCc--ccccccccCCc---eEe-CCCCccccccceeecCCcccccchhhHhhh
Q 008128 446 SDAKGYLVDEDGFDYMKISFLRDIKSQQRS--LRDYSKTYARS---KYY-DEAKPWNERCDVAFPCASQNEIDQSDAINL 519 (577)
Q Consensus 446 SDs~G~Iydp~GLD~e~L~~l~~~k~~~g~--l~~y~~~~p~a---~~i-~~~eil~~~cDIlIPcA~~n~It~enA~~l 519 (577)
||++|+||||+|||+++| .++++.+++ +.+| +.+ +.+ +++++|+.+||||+|||++|+||.+||++|
T Consensus 240 sD~~G~i~dp~GlD~~~l---~~~k~~~g~~~v~~y----~~~~~~~~~~~~~~~~~~~~Dil~P~A~~~~I~~~~a~~l 312 (421)
T 1v9l_A 240 SDINGVAYRKEGLNVELI---QKNKGLTGPALVELF----TTKDNAEFVKNPDAIFKLDVDIFVPAAIENVIRGDNAGLV 312 (421)
T ss_dssp ECSSCEEECTTCCCTHHH---HHTTTSCHHHHHHHH----HHTSCCCCCSSTTGGGGCCCSEEEECSCSSCBCTTTTTTC
T ss_pred ECCCcEEECCCCCCHHHH---HHHHHhhCCcccccc----ccccCceEeCCchhhhcCCccEEEecCcCCccchhhHHHc
Confidence 999999999999999886 677777777 8777 344 667 788999999999999999999999999999
Q ss_pred hccCceEEEecCCCCCCHHHHHHHHhCCcEEecchhccccceeehhhhhccc
Q 008128 520 VNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVRYSIFYSTCF 571 (577)
Q Consensus 520 ~~~~akiVvEgAN~p~T~eA~~iL~~rGI~viPD~~aNAGGVivS~~Ev~~~ 571 (577)
+||+|+||||+|+||+|+++|+++||+|+||+++|||||++||||+.-+
T Consensus 313 ---~ak~V~EgAN~p~t~~a~~~l~~~Gi~~~PD~~aNaGGV~~S~~E~~qn 361 (421)
T 1v9l_A 313 ---KARLVVEGANGPTTPEAERILYERGVVVVPDILANAGGVIMSYLEWVEN 361 (421)
T ss_dssp ---CCSEEECCSSSCBCHHHHHHHHTTTCEEECHHHHSTHHHHHHHHHHHHH
T ss_pred ---CceEEEecCCCcCCHHHHHHHHHCCCEEeChHHhhCCCeeeeHHHHHhh
Confidence 9999999999999999999999999999999999999999999999533
No 12
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=100.00 E-value=1.9e-93 Score=763.81 Aligned_cols=351 Identities=28% Similarity=0.426 Sum_probs=334.1
Q ss_pred CccHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEECCCCceEEEEEEEEEecCCCCCCCCCeeeecCCC
Q 008128 207 EIEFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPSMN 286 (577)
Q Consensus 207 ~~ef~qav~~~~~~~~~~~~~~p~y~~~le~l~~Per~i~~rvp~~dd~G~~~v~~GyRVqhs~alGPakGGlRfhp~vt 286 (577)
++.|+|++++++++++++|+.+|. ++++|.+|+|+|+|++||+||+|++++|+|||||||+++|||||||||||++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~p~r~~~~~~p~~~d~G~~~~~~g~rv~~~~~~Gp~kGG~R~~~~~~ 78 (419)
T 1gtm_A 2 EADPYEIVIKQLERAAQYMEISEE---ALEFLKRPQRIVEVTIPVEMDDGSVKVFTGFRVQHNWARGPTKGGIRWHPEET 78 (419)
T ss_dssp -CTHHHHHHHHHHHHGGGSCCCHH---HHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEECTTSSEECCEEECTTCC
T ss_pred CccHHHHHHHHHHHHHHHhCCChh---hhhcCCCCceEEEEEEEEEecCCCEEEEEEEEEEECCCCCCCcCCEEeeCCCC
Confidence 467999999999999999999996 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHhHHhhhccCCCCCCceEEEecCCCCCCHHHHHHHHHHHHHHHhhhcCCCcccCCCCCcCChhHHHHHHHH
Q 008128 287 LSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQ 366 (577)
Q Consensus 287 ~~evk~LA~~MT~KnAL~gLP~GGaKGGI~~DP~~~s~~Eler~~r~f~~eL~~~IGp~~DVpapDvGt~~~em~~i~~~ 366 (577)
++|+++||++|||||||++||+|||||||++||+++|+.|++|+||+|+++|.++|||++||||||+||+++||+||+++
T Consensus 79 ~~ev~~La~~mt~Knal~~lp~GG~Kggi~~dP~~~s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~~~~m~~~~~~ 158 (419)
T 1gtm_A 79 LSTVKALAAWMTWKTAVMDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAIYDVISPYEDIPAPDVYTNPQIMAWMMDE 158 (419)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSCEEEEEEEECCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhCCc-c--ccccCccccccCCCCCCCcchHHHHHHHHHHHHHcCCC-CCCceEEEEecchHHHHHHHHHHH-CCCe
Q 008128 367 YRRLAGHF-Q--GSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKE-LKGLRCVVSGSGKIAMHVLEKLIA-YGAI 441 (577)
Q Consensus 367 y~~~~g~~-~--g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~~~g~~-l~GkrVaIQGfGNVG~~aA~~L~e-~GAk 441 (577)
|++++|+. . |++||||+.+|||.+|+++|||||++++++++++++.+ |+|+||.||||||||+++|++|.+ .|++
T Consensus 159 y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~k 238 (419)
T 1gtm_A 159 YETISRRKTPAFGIITGKPLSIGGSLGRIEATARGASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMK 238 (419)
T ss_dssp HHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred HHHhhCCCCCccceEecCcchhCCCCCCCcchhhHHHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCE
Confidence 99999986 4 89999999999999999999999999999999999999 999999999999999999999999 9999
Q ss_pred EEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCccccccceeecCCcccccchhhHhhhhc
Q 008128 442 PVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVN 521 (577)
Q Consensus 442 VVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil~~~cDIlIPcA~~n~It~enA~~l~~ 521 (577)
|++++|++|.+|+++|+|+++| .++++..+++..| |..+.++.+++|..+||||||||.+++||+++++.|
T Consensus 239 Vv~~sD~~g~~~~~~gvdl~~L---~~~~d~~~~l~~l----~~t~~i~~~~l~~mk~dilIn~ArG~~Vde~a~~aL-- 309 (419)
T 1gtm_A 239 VVAVSDSKGGIYNPDGLNADEV---LKWKNEHGSVKDF----PGATNITNEELLELEVDVLAPAAIEEVITKKNADNI-- 309 (419)
T ss_dssp EEEEECSSCEEEEEEEECHHHH---HHHHHHHSSSTTC----TTSEEECHHHHHHSCCSEEEECSCSCCBCTTGGGGC--
T ss_pred EEEEeCCCccccCccCCCHHHH---HHHHHhcCEeecC----ccCeeeCHHHHHhCCCCEEEECCCcccCCHHHHHHh--
Confidence 9999999999999999998876 5555555677554 556667777888999999999999999999999988
Q ss_pred cCceEEEecCCCCCCHHHHHHHHhCCcEEecchhccccceeehhhhhcc
Q 008128 522 SGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVRYSIFYSTC 570 (577)
Q Consensus 522 ~~akiVvEgAN~p~T~eA~~iL~~rGI~viPD~~aNAGGVivS~~Ev~~ 570 (577)
+|+.|+||||+|+|+++..+|..+||++.||+++|||||++||||+.-
T Consensus 310 -~~~~I~~aAneP~t~~a~~ll~~~~V~itPhiaaNaGGvt~s~~E~~q 357 (419)
T 1gtm_A 310 -KAKIVAEVANGPVTPEADEILFEKGILQIPDFLCNAGGVTVSYFEWVQ 357 (419)
T ss_dssp -CCSEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHH
T ss_pred -cCCEEEEeeCCCCCcchHHHHhcCCEEEECchhhhCCcceeeeehhhh
Confidence 999999999999999999999999999999999999999999999863
No 13
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=100.00 E-value=8.1e-77 Score=623.48 Aligned_cols=287 Identities=21% Similarity=0.218 Sum_probs=258.0
Q ss_pred cCCCeEEEEEEeEECCCCceEEEEEEEEEecCCCCCCCCCeeeecCCCHH----HHHHHhHHhHHhhhccCCCCCCceEE
Q 008128 239 LEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPSMNLS----IAKFLGFEQTLKNALSPYKLGGAAGG 314 (577)
Q Consensus 239 ~~Per~i~~rvp~~dd~G~~~v~~GyRVqhs~alGPakGGlRfhp~vt~~----evk~LA~~MT~KnAL~gLP~GGaKGG 314 (577)
..||+++.++-| ...++|||||||+++|||||||||||++|.+ |+++||++|||||||++|||||||||
T Consensus 8 ~~~e~v~~~~d~-------~~~~~~~~~~h~~~~GP~kGG~R~~p~v~~~~~~~ev~~La~~mt~K~al~~lp~GG~Kgg 80 (355)
T 1c1d_A 8 WDGEMTVTRFDA-------MTGAHFVIRLDSTQLGPAAGGTRAAQYSNLADALTDAGKLAGAMTLKMAVSNLPMGGGKSV 80 (355)
T ss_dssp CCSSEEEEEEET-------TTTEEEEEEEEECSSSSEEEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEE
T ss_pred CCccEEEEEEcc-------ccceEEEEEEECCCCCCCCCcEEecCCCChHHHHHHHHHHHHHHHHHHHhhCCCCCCceee
Confidence 578988887665 2347999999999999999999999999976 89999999999999999999999999
Q ss_pred Eec-CCCC-CCHHHHHHHHHHHHHHHhhhcCCCcccCCCCCcCChhHHHHHHHHhhhhhCCccccccCccccccCCCCCC
Q 008128 315 SDF-DPKG-KSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRT 392 (577)
Q Consensus 315 I~~-DP~~-~s~~Eler~~r~f~~eL~~~IGp~~DVpapDvGt~~~em~~i~~~y~~~~g~~~g~vTGKp~~~GGs~~r~ 392 (577)
|++ ||++ +|..|.++++|+|.+.+..++|+ |||||||||+++||+||+++|+ ++||||+.+|||.+|+
T Consensus 81 i~~~dP~~~~s~~~~e~~~r~~~~~~~~l~g~--~ipa~D~gt~~~~m~~~~~~~~--------~~tGk~~~~GGs~~~~ 150 (355)
T 1c1d_A 81 IALPAPRHSIDPSTWARILRIHAENIDKLSGN--YWTGPDVNTNSADMDTLNDTTE--------FVFGRSLERGGAGSSA 150 (355)
T ss_dssp EECSSCGGGCCHHHHHHHHHHHHHHHHHTTTS--EEEEECTTCCHHHHHHHHHHCS--------CBCCCCGGGTSCCCCH
T ss_pred EeccCcccccChhhHHHHHHHHHHHHHHhcCC--cccCCCCCCCHHHHHHHHHhcC--------eeeccchhhCCCCCch
Confidence 999 9999 89888888877777777777775 8999999999999999999986 4899999999999999
Q ss_pred CcchHHHHHHHHHHHHHcCC-CCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHh
Q 008128 393 EATGYGLVFFAQLILADMNK-ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKS 471 (577)
Q Consensus 393 eATG~GV~~~~~~~l~~~g~-~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~ 471 (577)
++|||||++++++++++++. +++||||+||||||||+++|++|.+.|+||| ++|++ .++ .++.+
T Consensus 151 ~aTg~Gv~~~~~~~~~~~G~~~L~GktV~I~G~GnVG~~~A~~l~~~GakVv-vsD~~----------~~~----~~~a~ 215 (355)
T 1c1d_A 151 FTTAVGVFEAMKATVAHRGLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLL-VADTD----------TER----VAHAV 215 (355)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSC----------HHH----HHHHH
T ss_pred hHHHHHHHHHHHHHHHhcCCCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEE-EEeCC----------ccH----HHHHH
Confidence 99999999999999999997 8999999999999999999999999999998 99973 221 11211
Q ss_pred hcCcccccccccCCceEeCCCCccccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCH-HHHHHHHhCCcEE
Q 008128 472 QQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTP-EAVDVLKKANVLI 550 (577)
Q Consensus 472 ~~g~l~~y~~~~p~a~~i~~~eil~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~-eA~~iL~~rGI~v 550 (577)
.+ ++++++.+++|..+|||++|||++|+||.++++.+ +|++|+|+||+|+|+ +|.++|+++||++
T Consensus 216 ----------~~-ga~~v~~~ell~~~~DIliP~A~~~~I~~~~~~~l---k~~iVie~AN~p~t~~eA~~~L~~~gIlv 281 (355)
T 1c1d_A 216 ----------AL-GHTAVALEDVLSTPCDVFAPCAMGGVITTEVARTL---DCSVVAGAANNVIADEAASDILHARGILY 281 (355)
T ss_dssp ----------HT-TCEECCGGGGGGCCCSEEEECSCSCCBCHHHHHHC---CCSEECCSCTTCBCSHHHHHHHHHTTCEE
T ss_pred ----------hc-CCEEeChHHhhcCccceecHhHHHhhcCHHHHhhC---CCCEEEECCCCCCCCHHHHHHHHhCCEEE
Confidence 12 46677778899999999999999999999999999 999999999999985 9999999999999
Q ss_pred ecchhccccceeehh-hhhccc
Q 008128 551 APAMAAGAGGVRYSI-FYSTCF 571 (577)
Q Consensus 551 iPD~~aNAGGVivS~-~Ev~~~ 571 (577)
+||+++|||||++|| ||++.+
T Consensus 282 ~Pd~~aNaGGV~~s~~~E~~~w 303 (355)
T 1c1d_A 282 APDFVANAGGAIHLVGREVLGW 303 (355)
T ss_dssp CCHHHHTTHHHHHHHHHHTTCC
T ss_pred ECCeEEcCCCeeeeeeehhcCC
Confidence 999999999999999 998543
No 14
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=100.00 E-value=1e-73 Score=601.83 Aligned_cols=285 Identities=20% Similarity=0.269 Sum_probs=254.4
Q ss_pred cCCCeEEEEEEeEECCCCceEEEEEEEEEecCCCCCCCCCeeeecCCCHH----HHHHHhHHhHHhhhccCCCCCCceEE
Q 008128 239 LEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPSMNLS----IAKFLGFEQTLKNALSPYKLGGAAGG 314 (577)
Q Consensus 239 ~~Per~i~~rvp~~dd~G~~~v~~GyRVqhs~alGPakGGlRfhp~vt~~----evk~LA~~MT~KnAL~gLP~GGaKGG 314 (577)
..||+++.++-+ ...++|||||||+++|||||||||||++|.+ |+++||++|||||||++|||||||||
T Consensus 10 ~~~e~v~~~~d~-------~~~~~~~~~~h~~~~Gp~kGG~R~~p~v~~~~~~~e~~~La~~mt~K~al~~lp~GG~Kgg 82 (364)
T 1leh_A 10 YDYEQLVFCQDE-------ASGLKAVIAIHDTTLGPALGGARMWTYNAEEEAIEDALRLARGMTYKNAAAGLNLGGGKTV 82 (364)
T ss_dssp HTCCEEEEEEET-------TTTEEEEEEEEECSSSSEECCEEEECCSCHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEE
T ss_pred cCCeEEEEEEcc-------CcceEEEEEEECCCCCCCCCcEEecCCCChHHHHHHHHHHHHHHHHHHHhcCCCCcCcceE
Confidence 458888877553 2347999999999999999999999999976 89999999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHHhhhcCCCcccCCCCCcCChhHHHHHHHHhhhhhCCccccccCccccccCCCCCCCc
Q 008128 315 SDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEA 394 (577)
Q Consensus 315 I~~DP~~~s~~Eler~~r~f~~eL~~~IGp~~DVpapDvGt~~~em~~i~~~y~~~~g~~~g~vTGKp~~~GGs~~r~eA 394 (577)
|++||+++|.++++|.|.+||.+|. |+ ||||||+||+++||+||+++|+ ++||||+.+|||.+|+++
T Consensus 83 i~~dP~~~~~~~~~r~~~~~~~~l~---g~--~i~A~D~Gt~~~~m~~l~~~~~--------~~tGK~~~~ggs~~~~~a 149 (364)
T 1leh_A 83 IIGDPFADKNEDMFRALGRFIQGLN---GR--YITAEDVGTTVDDMDLIHQETD--------YVTGISPAFGSSGNPSPV 149 (364)
T ss_dssp EESCTTTTCCHHHHHHHHHHHHTTT---TS--EEBCBCTTCCHHHHHHHHTTCS--------CBCSCCHHHHHHCCHHHH
T ss_pred EeCCCCCCCHHHHHHHHHHHHHHhc---Cc--eEEcccCCCCHHHHHHHHHhcc--------hhcccccccCCCCCcccc
Confidence 9999999998888888888888775 43 7899999999999999999985 589999999999999999
Q ss_pred chHHHHHHHHHHHHHc-CC-CCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhh
Q 008128 395 TGYGLVFFAQLILADM-NK-ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQ 472 (577)
Q Consensus 395 TG~GV~~~~~~~l~~~-g~-~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~ 472 (577)
|||||+|++++++++. |. +|+|+||+|||+||||+++|++|.+.|++|+ ++|+ |.+++ .++.++
T Consensus 150 Tg~GV~~~~~~~~~~~~G~~~L~GktV~V~G~G~VG~~~A~~L~~~GakVv-v~D~----------~~~~l---~~~a~~ 215 (364)
T 1leh_A 150 TAYGVYRGMKAAAKEAFGSDSLEGLAVSVQGLGNVAKALCKKLNTEGAKLV-VTDV----------NKAAV---SAAVAE 215 (364)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECS----------CHHHH---HHHHHH
T ss_pred hhhHHHHHHHHHHHhhccccCCCcCEEEEECchHHHHHHHHHHHHCCCEEE-EEcC----------CHHHH---HHHHHH
Confidence 9999999999999985 75 8999999999999999999999999999988 9985 44454 333222
Q ss_pred cCcccccccccCCceEeCCCCccccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCC-HHHHHHHHhCCcEEe
Q 008128 473 QRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCT-PEAVDVLKKANVLIA 551 (577)
Q Consensus 473 ~g~l~~y~~~~p~a~~i~~~eil~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T-~eA~~iL~~rGI~vi 551 (577)
+ ++++++.+++|..+|||++||+++++||.++++.+ +|++|+|+||+|+| +++.++|+++||+|+
T Consensus 216 ----------~-ga~~v~~~~ll~~~~DIvip~a~~~~I~~~~~~~l---g~~iV~e~An~p~t~~ea~~~L~~~Gi~~~ 281 (364)
T 1leh_A 216 ----------E-GADAVAPNAIYGVTCDIFAPCALGAVLNDFTIPQL---KAKVIAGSADNQLKDPRHGKYLHELGIVYA 281 (364)
T ss_dssp ----------H-CCEECCGGGTTTCCCSEEEECSCSCCBSTTHHHHC---CCSEECCSCSCCBSSHHHHHHHHHHTCEEC
T ss_pred ----------c-CCEEEChHHHhccCCcEeeccchHHHhCHHHHHhC---CCcEEEeCCCCCcccHHHHHHHHhCCCEEe
Confidence 1 35566667889999999999999999999999999 99999999999987 499999999999999
Q ss_pred cchhccccceeehhhhhccc
Q 008128 552 PAMAAGAGGVRYSIFYSTCF 571 (577)
Q Consensus 552 PD~~aNAGGVivS~~Ev~~~ 571 (577)
||+++|||||++||||++.+
T Consensus 282 Pd~~~NaGGv~~s~~E~~~~ 301 (364)
T 1leh_A 282 PDYVINAGGVINVADELYGY 301 (364)
T ss_dssp CHHHHTTHHHHHHHHGGGCC
T ss_pred cceeecCCceEEEEEeecCC
Confidence 99999999999999999543
No 15
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=97.76 E-value=5e-05 Score=78.76 Aligned_cols=122 Identities=20% Similarity=0.287 Sum_probs=83.3
Q ss_pred CceEEEEecchHHHHHHHHHHHC-------CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceE
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAY-------GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY 488 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~-------GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~ 488 (577)
-.+|+|.|+|+||+.+++.|.+. +.+|++|+|++...++++ +|.+++ .+.++..+.+..+ .+
T Consensus 4 ~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~-idl~~~---~~~~~~~g~~~~~-------~~ 72 (325)
T 3ing_A 4 EIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRN-LDISSI---ISNKEKTGRISDR-------AF 72 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSS-CCHHHH---HHHHHHHSCSCSS-------BC
T ss_pred eEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccc-cCHHHH---HHHhhhcCCCCcc-------cC
Confidence 35899999999999999999873 578999999999999998 997664 3333333333321 11
Q ss_pred eCCCCcc-ccccceeecCCcccccc---hhhHhhhhccCceEEEecCCC-CCCHHHHHH---HHhCCcEEe
Q 008128 489 YDEAKPW-NERCDVAFPCASQNEID---QSDAINLVNSGCRILVEGSNM-PCTPEAVDV---LKKANVLIA 551 (577)
Q Consensus 489 i~~~eil-~~~cDIlIPcA~~n~It---~enA~~l~~~~akiVvEgAN~-p~T~eA~~i---L~~rGI~vi 551 (577)
+..+++ +.++||++.|+..+... .+.+...+++|..+|++ |- +++.++.++ -+++|+.+.
T Consensus 73 -d~~e~l~~~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVta--NK~~la~~~~eL~~lA~~~g~~~~ 140 (325)
T 3ing_A 73 -SGPEDLMGEAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTA--NKSGLANKWHDIMDSANQNSKYIR 140 (325)
T ss_dssp -CSGGGGTTSCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEEC--CCHHHHHHHHHHHHHHHHHTCCEE
T ss_pred -CHHHHhcCCCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEc--CchhHHHHHHHHHHHHHHcCCeEE
Confidence 334444 56899999999866332 36677777889999985 32 233344333 356787554
No 16
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.60 E-value=0.00043 Score=73.58 Aligned_cols=116 Identities=18% Similarity=0.208 Sum_probs=83.4
Q ss_pred HHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCC---CCHHhHhHHHHHHhhcCccc
Q 008128 401 FFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDG---FDYMKISFLRDIKSQQRSLR 477 (577)
Q Consensus 401 ~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~G---LD~e~L~~l~~~k~~~g~l~ 477 (577)
.++..+++-.+.+++..||+|.|.|.+|..+|+.|...|++=|.+.|++|.|+.... ++..+. .+........
T Consensus 177 Aal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~----~~A~~~~~~~ 252 (388)
T 1vl6_A 177 AAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHL----EIARITNPER 252 (388)
T ss_dssp HHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHH----HHHHTSCTTC
T ss_pred HHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHH----HHHHhhhccC
Confidence 355555665688999999999999999999999999999966889999999987553 554321 1111111100
Q ss_pred ccccccCCceEeCCCCccc--cccceeecCCcccccchhhHhhhhccCceEEEecCCCCC
Q 008128 478 DYSKTYARSKYYDEAKPWN--ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC 535 (577)
Q Consensus 478 ~y~~~~p~a~~i~~~eil~--~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~ 535 (577)
...++.+ ..+||+|=++..+.+|++-.+++.+ +. +|.+-|| |+
T Consensus 253 ------------~~~~L~eav~~ADVlIG~Sap~l~t~emVk~Ma~-~p-IIfalSN-Pt 297 (388)
T 1vl6_A 253 ------------LSGDLETALEGADFFIGVSRGNILKPEWIKKMSR-KP-VIFALAN-PV 297 (388)
T ss_dssp ------------CCSCHHHHHTTCSEEEECSCSSCSCHHHHTTSCS-SC-EEEECCS-SS
T ss_pred ------------chhhHHHHHccCCEEEEeCCCCccCHHHHHhcCC-CC-EEEEcCC-CC
Confidence 1112221 2589999998899999999999832 33 9999999 64
No 17
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.32 E-value=0.0019 Score=65.05 Aligned_cols=121 Identities=16% Similarity=0.204 Sum_probs=75.2
Q ss_pred HHHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccC
Q 008128 405 LILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYA 484 (577)
Q Consensus 405 ~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p 484 (577)
.++...+.++.|++|.|.|+|++|+.+|+.|...|++|+ +.|.+ .+++. ..++ .
T Consensus 144 ~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~-~~dr~----------~~~~~---~~~~-~----------- 197 (293)
T 3d4o_A 144 MAIQHTDFTIHGANVAVLGLGRVGMSVARKFAALGAKVK-VGARE----------SDLLA---RIAE-M----------- 197 (293)
T ss_dssp HHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEESS----------HHHHH---HHHH-T-----------
T ss_pred HHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEE-EEECC----------HHHHH---HHHH-C-----------
Confidence 344556789999999999999999999999999999854 45541 12221 1111 1
Q ss_pred CceEeCCCCc--cccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHHHhCCcEEe--cch
Q 008128 485 RSKYYDEAKP--WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIA--PAM 554 (577)
Q Consensus 485 ~a~~i~~~ei--l~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI~vi--PD~ 554 (577)
+++.++..++ +-..|||++-|...+.++.+....+ +.++ +++.-+-+|..-+- +..+++|+.++ |+.
T Consensus 198 g~~~~~~~~l~~~l~~aDvVi~~~p~~~i~~~~l~~m-k~~~-~lin~ar~~~~~~~-~~a~~~Gv~~~~~~~l 268 (293)
T 3d4o_A 198 GMEPFHISKAAQELRDVDVCINTIPALVVTANVLAEM-PSHT-FVIDLASKPGGTDF-RYAEKRGIKALLVPGL 268 (293)
T ss_dssp TSEEEEGGGHHHHTTTCSEEEECCSSCCBCHHHHHHS-CTTC-EEEECSSTTCSBCH-HHHHHHTCEEEECCCH
T ss_pred CCeecChhhHHHHhcCCCEEEECCChHHhCHHHHHhc-CCCC-EEEEecCCCCCCCH-HHHHHCCCEEEECCCC
Confidence 1111111111 1247999999998888888766554 4455 45555544422122 55677888774 554
No 18
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.19 E-value=0.0015 Score=70.76 Aligned_cols=98 Identities=14% Similarity=0.159 Sum_probs=63.6
Q ss_pred HHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCce
Q 008128 408 ADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSK 487 (577)
Q Consensus 408 ~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~ 487 (577)
+..+..+.|+||.|.|+|+||+.+|+.|...|++|+ +.|. |.... .+... . +.+
T Consensus 239 Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Vi-v~d~----------dp~~a---~~A~~-~-----------G~~ 292 (464)
T 3n58_A 239 RGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVK-VTEV----------DPICA---LQAAM-D-----------GFE 292 (464)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECS----------SHHHH---HHHHH-T-----------TCE
T ss_pred HhcCCcccCCEEEEECcCHHHHHHHHHHHHCCCEEE-EEeC----------Ccchh---hHHHh-c-----------Cce
Confidence 345789999999999999999999999999999965 5554 22111 11110 0 122
Q ss_pred EeCCCCccccccceeecCCc-ccccchhhHhhhhccCceEEEecCCCC
Q 008128 488 YYDEAKPWNERCDVAFPCAS-QNEIDQSDAINLVNSGCRILVEGSNMP 534 (577)
Q Consensus 488 ~i~~~eil~~~cDIlIPcA~-~n~It~enA~~l~~~~akiVvEgAN~p 534 (577)
+++-++++ ..+||++.|+. .+.|+.+....+ +.+| +|+--+...
T Consensus 293 vv~LeElL-~~ADIVv~atgt~~lI~~e~l~~M-K~GA-ILINvGRgd 337 (464)
T 3n58_A 293 VVTLDDAA-STADIVVTTTGNKDVITIDHMRKM-KDMC-IVGNIGHFD 337 (464)
T ss_dssp ECCHHHHG-GGCSEEEECCSSSSSBCHHHHHHS-CTTE-EEEECSSST
T ss_pred eccHHHHH-hhCCEEEECCCCccccCHHHHhcC-CCCe-EEEEcCCCC
Confidence 22222222 37899999864 578888887776 4456 445555544
No 19
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=97.17 E-value=0.0011 Score=70.30 Aligned_cols=157 Identities=15% Similarity=0.190 Sum_probs=95.2
Q ss_pred cCCCCCcCChhHHHHHHHHhhhhhCCccccccCccccccCCCCCCCcchHHHHHHHHHHHHHcCCCCCCceEEEEecchH
Q 008128 348 LPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKI 427 (577)
Q Consensus 348 VpapDvGt~~~em~~i~~~y~~~~g~~~g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNV 427 (577)
|-....|++.-|+.++.. +|- .+|.-| | ....+++-.++..+-.+.+..+.++.|+||.|+|+|++
T Consensus 62 I~~~~~G~D~iD~~~~~~-----~gI---~v~n~p----g--~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG~I 127 (380)
T 2o4c_A 62 VGTCTIGTDHLDLDYFAE-----AGI---AWSSAP----G--CNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQV 127 (380)
T ss_dssp EEECSSCSTTBCHHHHHH-----HTC---EEECCT----T--TTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSHH
T ss_pred EEEcCcccchhhHHHHHh-----CCC---EEEeCC----C--cChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCCHH
Confidence 445667777777777643 221 112111 1 12346666677777777777889999999999999999
Q ss_pred HHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCccccccceeecCC-
Q 008128 428 AMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCA- 506 (577)
Q Consensus 428 G~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil~~~cDIlIPcA- 506 (577)
|+.+|+.|...|.+|++ .|. . . + .... +..+.+.++++ .+|||++.|.
T Consensus 128 G~~vA~~l~~~G~~V~~-~d~-------~-----~-----~-~~~~-----------g~~~~~l~ell-~~aDvV~l~~P 176 (380)
T 2o4c_A 128 GGRLVEVLRGLGWKVLV-CDP-------P-----R-----Q-AREP-----------DGEFVSLERLL-AEADVISLHTP 176 (380)
T ss_dssp HHHHHHHHHHTTCEEEE-ECH-------H-----H-----H-HHST-----------TSCCCCHHHHH-HHCSEEEECCC
T ss_pred HHHHHHHHHHCCCEEEE-EcC-------C-----h-----h-hhcc-----------CcccCCHHHHH-HhCCEEEEecc
Confidence 99999999999999764 332 1 0 0 0000 11111111222 3788888876
Q ss_pred --------cccccchhhHhhhhccCceEEEecCCCC-CCHHH-HHHHHhCCcEEe
Q 008128 507 --------SQNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVLIA 551 (577)
Q Consensus 507 --------~~n~It~enA~~l~~~~akiVvEgAN~p-~T~eA-~~iL~~rGI~vi 551 (577)
+.+.|+.+....+ +.+ .+++.-+.++ +..+| .+.|++.+|.-+
T Consensus 177 lt~~g~~~T~~li~~~~l~~m-k~g-ailIN~sRG~vvd~~aL~~aL~~g~i~~A 229 (380)
T 2o4c_A 177 LNRDGEHPTRHLLDEPRLAAL-RPG-TWLVNASRGAVVDNQALRRLLEGGADLEV 229 (380)
T ss_dssp CCSSSSSCCTTSBCHHHHHTS-CTT-EEEEECSCGGGBCHHHHHHHHHTTCCEEE
T ss_pred CccccccchhhhcCHHHHhhC-CCC-cEEEECCCCcccCHHHHHHHHHhCCCceE
Confidence 4456766666655 223 3666677766 34444 466777666544
No 20
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=97.08 E-value=0.0043 Score=61.17 Aligned_cols=130 Identities=16% Similarity=0.027 Sum_probs=80.1
Q ss_pred HHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCC
Q 008128 406 ILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYAR 485 (577)
Q Consensus 406 ~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~ 485 (577)
++++.+.+++| +|.|.|.|++|+.+++.|.+.|++ |.+.|. +.+++..+. +..+
T Consensus 107 ~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~-v~v~~r----------~~~~~~~l~---~~~~----------- 160 (263)
T 2d5c_A 107 ALKAGGIPLKG-PALVLGAGGAGRAVAFALREAGLE-VWVWNR----------TPQRALALA---EEFG----------- 160 (263)
T ss_dssp HHHHTTCCCCS-CEEEECCSHHHHHHHHHHHHTTCC-EEEECS----------SHHHHHHHH---HHHT-----------
T ss_pred HHHHhCCCCCC-eEEEECCcHHHHHHHHHHHHCCCE-EEEEEC----------CHHHHHHHH---HHhc-----------
Confidence 34556778999 999999999999999999999985 677776 223322222 1111
Q ss_pred ceEeCCCCccccccceeecCCcccccch--h--hHhhhhccCceEEEecCCCCCCHHHHHHHHhCCcEEecchhccccce
Q 008128 486 SKYYDEAKPWNERCDVAFPCASQNEIDQ--S--DAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGV 561 (577)
Q Consensus 486 a~~i~~~eil~~~cDIlIPcA~~n~It~--e--nA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI~viPD~~aNAGGV 561 (577)
.++-+..+. .+|||+|-|........ . ....+ +.+ ++|++-+..|...+-.+.++++|+.++|..-.-.+..
T Consensus 161 ~~~~~~~~~--~~~Divi~~tp~~~~~~~~~~l~~~~l-~~g-~~viD~~~~p~~t~l~~~a~~~g~~~v~g~~mlv~q~ 236 (263)
T 2d5c_A 161 LRAVPLEKA--REARLLVNATRVGLEDPSASPLPAELF-PEE-GAAVDLVYRPLWTRFLREAKAKGLKVQTGLPMLAWQG 236 (263)
T ss_dssp CEECCGGGG--GGCSEEEECSSTTTTCTTCCSSCGGGS-CSS-SEEEESCCSSSSCHHHHHHHHTTCEEECSHHHHHHHH
T ss_pred cchhhHhhc--cCCCEEEEccCCCCCCCCCCCCCHHHc-CCC-CEEEEeecCCcccHHHHHHHHCcCEEECcHHHHHHHH
Confidence 111111223 68999999887553110 1 12222 334 4677877767432455677889999998865554444
Q ss_pred eehh
Q 008128 562 RYSI 565 (577)
Q Consensus 562 ivS~ 565 (577)
+.++
T Consensus 237 ~~a~ 240 (263)
T 2d5c_A 237 ALAF 240 (263)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4333
No 21
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.04 E-value=0.0032 Score=63.52 Aligned_cols=123 Identities=12% Similarity=0.191 Sum_probs=76.4
Q ss_pred HHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCc
Q 008128 407 LADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARS 486 (577)
Q Consensus 407 l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a 486 (577)
++..+.++.|+||.|.|+|++|+.+|+.|...|++|+ +.|.+ .+++. ...+ .+ .
T Consensus 148 ~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~-~~d~~----------~~~~~---~~~~-~g-----------~ 201 (300)
T 2rir_A 148 IQHTDYTIHGSQVAVLGLGRTGMTIARTFAALGANVK-VGARS----------SAHLA---RITE-MG-----------L 201 (300)
T ss_dssp HHTCSSCSTTSEEEEECCSHHHHHHHHHHHHTTCEEE-EEESS----------HHHHH---HHHH-TT-----------C
T ss_pred HHhcCCCCCCCEEEEEcccHHHHHHHHHHHHCCCEEE-EEECC----------HHHHH---HHHH-CC-----------C
Confidence 3445789999999999999999999999999999854 45541 22221 1111 11 1
Q ss_pred eEeCCCCc--cccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHHHhCCcEEe--cchhccc
Q 008128 487 KYYDEAKP--WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIA--PAMAAGA 558 (577)
Q Consensus 487 ~~i~~~ei--l~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI~vi--PD~~aNA 558 (577)
+.++..++ +-..|||++-|...+.++.+....+ +.++ +|+.-|-+|..-+- +..+++|+.++ |+.-...
T Consensus 202 ~~~~~~~l~~~l~~aDvVi~~~p~~~i~~~~~~~m-k~g~-~lin~a~g~~~~~~-~~a~~~G~~~i~~pg~~g~v 274 (300)
T 2rir_A 202 VPFHTDELKEHVKDIDICINTIPSMILNQTVLSSM-TPKT-LILDLASRPGGTDF-KYAEKQGIKALLAPGLPGIV 274 (300)
T ss_dssp EEEEGGGHHHHSTTCSEEEECCSSCCBCHHHHTTS-CTTC-EEEECSSTTCSBCH-HHHHHHTCEEEECCCHHHHH
T ss_pred eEEchhhHHHHhhCCCEEEECCChhhhCHHHHHhC-CCCC-EEEEEeCCCCCcCH-HHHHHCCCEEEECCCCCCcH
Confidence 11111111 1247999999998888887655544 4455 55555555532222 45677898765 7654443
No 22
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=97.01 E-value=0.0034 Score=65.53 Aligned_cols=108 Identities=15% Similarity=0.151 Sum_probs=68.7
Q ss_pred CCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEe-C
Q 008128 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-D 490 (577)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i-~ 490 (577)
.++.|+||.|.|+|++|+.+|+.|...|.+|++ .|.+ ++ . .. .. .. +++.. +
T Consensus 164 ~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~-~d~~-----~~--~--~~---~~---~~-----------g~~~~~~ 216 (347)
T 1mx3_A 164 ARIRGETLGIIGLGRVGQAVALRAKAFGFNVLF-YDPY-----LS--D--GV---ER---AL-----------GLQRVST 216 (347)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEE-ECTT-----SC--T--TH---HH---HH-----------TCEECSS
T ss_pred cCCCCCEEEEEeECHHHHHHHHHHHHCCCEEEE-ECCC-----cc--h--hh---Hh---hc-----------CCeecCC
Confidence 579999999999999999999999999999764 4431 11 1 11 00 00 12222 1
Q ss_pred CCCccccccceeecCCc-----ccccchhhHhhhhccCceEEEecCCCC-CCHHH-HHHHHhCCcE
Q 008128 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (577)
Q Consensus 491 ~~eil~~~cDIlIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~p-~T~eA-~~iL~~rGI~ 549 (577)
.++++ ..|||++-|.. .+.|+.+....+ +.++ +++.-|.++ ++.+| .+.|++.+|.
T Consensus 217 l~ell-~~aDvV~l~~P~t~~t~~li~~~~l~~m-k~ga-ilIN~arg~~vd~~aL~~aL~~g~i~ 279 (347)
T 1mx3_A 217 LQDLL-FHSDCVTLHCGLNEHNHHLINDFTVKQM-RQGA-FLVNTARGGLVDEKALAQALKEGRIR 279 (347)
T ss_dssp HHHHH-HHCSEEEECCCCCTTCTTSBSHHHHTTS-CTTE-EEEECSCTTSBCHHHHHHHHHHTSEE
T ss_pred HHHHH-hcCCEEEEcCCCCHHHHHHhHHHHHhcC-CCCC-EEEECCCChHHhHHHHHHHHHhCCCc
Confidence 12222 37899887654 456776666555 3344 566666666 55554 5788888876
No 23
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.96 E-value=0.0076 Score=61.63 Aligned_cols=53 Identities=21% Similarity=0.281 Sum_probs=45.6
Q ss_pred CCCcchHHHHHHHHHHHHHcCCCCCCceEEEEecch-HHHHHHHHHHHCCCeEEEEEcC
Q 008128 391 RTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGK-IAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 391 r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGN-VG~~aA~~L~e~GAkVVaISDs 448 (577)
-...|.+|++. ++++.+.+++|++|+|.|.|+ ||..+|..|...|++ |+|+++
T Consensus 140 ~~PcTp~gv~~----lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAt-Vtv~hs 193 (285)
T 3l07_A 140 LESCTPKGIMT----MLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKAT-VTTCHR 193 (285)
T ss_dssp CCCHHHHHHHH----HHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE-EEEECT
T ss_pred CCCCCHHHHHH----HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCe-EEEEeC
Confidence 35689999874 566678999999999999887 899999999999998 578876
No 24
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.96 E-value=0.0016 Score=67.56 Aligned_cols=120 Identities=16% Similarity=0.192 Sum_probs=76.5
Q ss_pred ceEEEEecchHHHHHHHHHHHC---------CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCce
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY---------GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSK 487 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~---------GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~ 487 (577)
.+|.|.|+|+||+..++.|.+. +.+|++|+|++....++ +|..+. ...+.....+. .
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~--id~~~~---~~~~~~~~~~~------~--- 68 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGD--FSLVEA---LRMKRETGMLR------D--- 68 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESS--CCHHHH---HHHHHHHSSCS------B---
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccc--cCHHHH---HhhhccCcccc------C---
Confidence 4899999999999999999764 78999999999888887 776543 11111111111 0
Q ss_pred EeCCCCcc-ccccceeecCCcccccc---hhhHhhhhccCceEEEecCCCCCCHHHH---HHHHhCCcEEe
Q 008128 488 YYDEAKPW-NERCDVAFPCASQNEID---QSDAINLVNSGCRILVEGSNMPCTPEAV---DVLKKANVLIA 551 (577)
Q Consensus 488 ~i~~~eil-~~~cDIlIPcA~~n~It---~enA~~l~~~~akiVvEgAN~p~T~eA~---~iL~~rGI~vi 551 (577)
..+.++++ +.++|+++-|+..+.-+ .+.+...++++..+|+|-- .|++.... +.-+++|+.+.
T Consensus 69 ~~d~~~ll~~~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~NK-kpla~~~~eL~~~A~~~g~~~~ 138 (327)
T 3do5_A 69 DAKAIEVVRSADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTSNK-GPLVAEFHGLMSLAERNGVRLM 138 (327)
T ss_dssp CCCHHHHHHHSCCSEEEECCCCC----CHHHHHHHHHTTTCEEEECCS-HHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCHHHHhcCCCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEecCc-hhhHHHHHHHHHHHHhhCCcEE
Confidence 01113344 45799999998754322 4555666788999999811 13333333 44467888654
No 25
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.91 E-value=0.0088 Score=61.17 Aligned_cols=53 Identities=25% Similarity=0.355 Sum_probs=45.6
Q ss_pred CCCcchHHHHHHHHHHHHHcCCCCCCceEEEEecch-HHHHHHHHHHHCCCeEEEEEcC
Q 008128 391 RTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGK-IAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 391 r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGN-VG~~aA~~L~e~GAkVVaISDs 448 (577)
-...|.+|++ +++++.+.+++|++|+|.|.|+ ||..+|..|...|++ |+|+++
T Consensus 139 ~~PcTp~gv~----~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAt-Vtv~h~ 192 (285)
T 3p2o_A 139 FLPCTPLGVM----KLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGAT-VSVCHI 192 (285)
T ss_dssp CCCHHHHHHH----HHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE-EEEECT
T ss_pred CCCCCHHHHH----HHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeC
Confidence 3578999986 4556678999999999999887 899999999999999 778876
No 26
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.88 E-value=0.0089 Score=61.55 Aligned_cols=54 Identities=26% Similarity=0.353 Sum_probs=45.9
Q ss_pred CCCCcchHHHHHHHHHHHHHcCCCCCCceEEEEecch-HHHHHHHHHHHCCCeEEEEEcC
Q 008128 390 LRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGK-IAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 390 ~r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGN-VG~~aA~~L~e~GAkVVaISDs 448 (577)
+-...|.+|++. +|++.+.+++|++|+|.|.|+ ||..+|..|...|++ |+|+++
T Consensus 143 ~~~PcTp~gv~~----lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAt-Vtv~~~ 197 (300)
T 4a26_A 143 PFTPCTAKGVIV----LLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENAT-VTIVHS 197 (300)
T ss_dssp SCCCHHHHHHHH----HHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE-EEEECT
T ss_pred CCCCCCHHHHHH----HHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeC
Confidence 345789999775 455568999999999999887 899999999999999 678886
No 27
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=96.81 E-value=0.0054 Score=66.06 Aligned_cols=110 Identities=15% Similarity=0.186 Sum_probs=68.8
Q ss_pred HHHHHHHHHHH-HHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCc
Q 008128 397 YGLVFFAQLIL-ADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (577)
Q Consensus 397 ~GV~~~~~~~l-~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~ 475 (577)
||+...+-..+ +..+..+.|++|+|.|+|++|+.+|+.|...|++|+ +.|.+ .... .+... .
T Consensus 200 yGt~~s~~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Vi-v~D~d----------p~ra---~~A~~-~-- 262 (435)
T 3gvp_A 200 YCCRESILDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVY-VTEID----------PICA---LQACM-D-- 262 (435)
T ss_dssp HHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSC----------HHHH---HHHHH-T--
T ss_pred hhhHHHHHHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCCEEE-EEeCC----------hhhh---HHHHH-c--
Confidence 44443333333 335788999999999999999999999999999954 56652 2111 11111 1
Q ss_pred ccccccccCCceEeCCCCccccccceeecCCc-ccccchhhHhhhhccCceEEEecCCCCC
Q 008128 476 LRDYSKTYARSKYYDEAKPWNERCDVAFPCAS-QNEIDQSDAINLVNSGCRILVEGSNMPC 535 (577)
Q Consensus 476 l~~y~~~~p~a~~i~~~eil~~~cDIlIPcA~-~n~It~enA~~l~~~~akiVvEgAN~p~ 535 (577)
+.+..+-++++ ..+||++.|+. .+.|+.+....+ +.++ +|+--++++.
T Consensus 263 ---------G~~v~~Leeal-~~ADIVi~atgt~~lI~~e~l~~M-K~ga-ilINvgrg~~ 311 (435)
T 3gvp_A 263 ---------GFRLVKLNEVI-RQVDIVITCTGNKNVVTREHLDRM-KNSC-IVCNMGHSNT 311 (435)
T ss_dssp ---------TCEECCHHHHT-TTCSEEEECSSCSCSBCHHHHHHS-CTTE-EEEECSSTTT
T ss_pred ---------CCEeccHHHHH-hcCCEEEECCCCcccCCHHHHHhc-CCCc-EEEEecCCCc
Confidence 11111111222 37899999854 678998887776 3454 6666677764
No 28
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.75 E-value=0.013 Score=60.09 Aligned_cols=53 Identities=25% Similarity=0.338 Sum_probs=44.5
Q ss_pred CCCcchHHHHHHHHHHHHHcCCCCCCceEEEEecch-HHHHHHHHHHHCCCeEEEEEcC
Q 008128 391 RTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGK-IAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 391 r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGN-VG~~aA~~L~e~GAkVVaISDs 448 (577)
-...|.+|++.. +++.+.+++|++|+|.|.|+ ||..+|..|...|++ |+++++
T Consensus 138 ~~PcTp~gi~~l----l~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAt-Vtv~hs 191 (288)
T 1b0a_A 138 LRPCTPRGIVTL----LERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCT-TTVTHR 191 (288)
T ss_dssp SCCHHHHHHHHH----HHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCE-EEEECS
T ss_pred CCCCcHHHHHHH----HHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCe-EEEEeC
Confidence 346898886554 55568899999999999997 799999999999999 677775
No 29
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=96.68 E-value=0.0069 Score=65.29 Aligned_cols=103 Identities=13% Similarity=0.134 Sum_probs=67.0
Q ss_pred HHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCce
Q 008128 408 ADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSK 487 (577)
Q Consensus 408 ~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~ 487 (577)
+..+..+.|++|+|.|+|++|+.+|+.|...|++|+ +.|+ + .... ..... . +.+
T Consensus 203 ratg~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Vi-v~D~-------~---p~~a---~~A~~-~-----------G~~ 256 (436)
T 3h9u_A 203 RATDVMIAGKTACVCGYGDVGKGCAAALRGFGARVV-VTEV-------D---PINA---LQAAM-E-----------GYQ 256 (436)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECS-------C---HHHH---HHHHH-T-----------TCE
T ss_pred HhcCCcccCCEEEEEeeCHHHHHHHHHHHHCCCEEE-EECC-------C---hhhh---HHHHH-h-----------CCe
Confidence 445889999999999999999999999999999954 5665 2 2111 11111 1 112
Q ss_pred EeCCCCccccccceeecCCc-ccccchhhHhhhhccCceEEEecCCCC--CCHHH
Q 008128 488 YYDEAKPWNERCDVAFPCAS-QNEIDQSDAINLVNSGCRILVEGSNMP--CTPEA 539 (577)
Q Consensus 488 ~i~~~eil~~~cDIlIPcA~-~n~It~enA~~l~~~~akiVvEgAN~p--~T~eA 539 (577)
..+-++++ ..|||++-|.. .+.|+.+....+ +.++ +|+--|+++ +.+++
T Consensus 257 ~~sL~eal-~~ADVVilt~gt~~iI~~e~l~~M-K~gA-IVINvgRg~vEID~~~ 308 (436)
T 3h9u_A 257 VLLVEDVV-EEAHIFVTTTGNDDIITSEHFPRM-RDDA-IVCNIGHFDTEIQVAW 308 (436)
T ss_dssp ECCHHHHT-TTCSEEEECSSCSCSBCTTTGGGC-CTTE-EEEECSSSGGGBCHHH
T ss_pred ecCHHHHH-hhCCEEEECCCCcCccCHHHHhhc-CCCc-EEEEeCCCCCccCHHH
Confidence 22212222 36899997654 478898887776 3454 666677776 34444
No 30
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=96.68 E-value=0.008 Score=64.08 Aligned_cols=122 Identities=18% Similarity=0.229 Sum_probs=83.0
Q ss_pred CcchHHHH--HHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCC--CCCHHhHhHHHH
Q 008128 393 EATGYGLV--FFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDED--GFDYMKISFLRD 468 (577)
Q Consensus 393 eATG~GV~--~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~--GLD~e~L~~l~~ 468 (577)
+.-|.+++ .++-.+++-.|.+++..||+|.|.|.+|.++|+.|...|++=|.+.|++|.|+... .|+..+..
T Consensus 163 DiqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~---- 238 (398)
T 2a9f_A 163 DQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLD---- 238 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---C----
T ss_pred hhhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHH----
Confidence 33344443 34455556568899999999999999999999999999996689999999998753 35442211
Q ss_pred HHhhcCcccccccccCCceEeCCCCccc--cccceeecCCcccccchhhHhhhhccCceEEEecCC
Q 008128 469 IKSQQRSLRDYSKTYARSKYYDEAKPWN--ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (577)
Q Consensus 469 ~k~~~g~l~~y~~~~p~a~~i~~~eil~--~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (577)
+........ ....+.+ ..+||||=++..+.+|++-.+++. .=.||.--||
T Consensus 239 fa~~~~~~~------------~~~~L~eav~~ADV~IG~Sapgl~T~EmVk~Ma--~~pIIfalsN 290 (398)
T 2a9f_A 239 IAKVTNREF------------KSGTLEDALEGADIFIGVSAPGVLKAEWISKMA--ARPVIFAMAN 290 (398)
T ss_dssp HHHHHSCTT------------CCCSCSHHHHTTCSEEECCSTTCCCHHHHHTSC--SSCEEEECCS
T ss_pred HhhccCccc------------chhhHHHHhccCCEEEecCCCCCCCHHHHHhhC--CCCEEEECCC
Confidence 110000000 0111221 257999999989999999999984 3457777888
No 31
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=96.63 E-value=0.01 Score=59.11 Aligned_cols=145 Identities=13% Similarity=0.057 Sum_probs=88.4
Q ss_pred CcchHHHHHHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhh
Q 008128 393 EATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQ 472 (577)
Q Consensus 393 eATG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~ 472 (577)
..++.|+..+++ ..+.+++|++|.|.|.|++|+.++..|.+.|++ |.+.|. +.+++ .++.+.
T Consensus 110 nTd~~G~~~~l~----~~~~~~~~~~v~iiGaG~~g~aia~~L~~~g~~-V~v~~r----------~~~~~---~~l~~~ 171 (275)
T 2hk9_A 110 NTDWIGFLKSLK----SLIPEVKEKSILVLGAGGASRAVIYALVKEGAK-VFLWNR----------TKEKA---IKLAQK 171 (275)
T ss_dssp CCHHHHHHHHHH----HHCTTGGGSEEEEECCSHHHHHHHHHHHHHTCE-EEEECS----------SHHHH---HHHTTT
T ss_pred cCCHHHHHHHHH----HhCCCcCCCEEEEECchHHHHHHHHHHHHcCCE-EEEEEC----------CHHHH---HHHHHH
Confidence 346777777665 346789999999999999999999999999995 677776 22332 222111
Q ss_pred cCcccccccccCCceEeCC-CCccccccceeecCCcccccch--hhH-hhhhccCceEEEecCCCCCCHHHHHHHHhCCc
Q 008128 473 QRSLRDYSKTYARSKYYDE-AKPWNERCDVAFPCASQNEIDQ--SDA-INLVNSGCRILVEGSNMPCTPEAVDVLKKANV 548 (577)
Q Consensus 473 ~g~l~~y~~~~p~a~~i~~-~eil~~~cDIlIPcA~~n~It~--enA-~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI 548 (577)
. +.+..+. .+.+ .+|||+|-|........ ... ...++.+ ++|++-+. ..|+ -.+..+++|+
T Consensus 172 ~-----------g~~~~~~~~~~~-~~aDiVi~atp~~~~~~~~~~i~~~~l~~g-~~viDv~~-~~t~-ll~~a~~~g~ 236 (275)
T 2hk9_A 172 F-----------PLEVVNSPEEVI-DKVQVIVNTTSVGLKDEDPEIFNYDLIKKD-HVVVDIIY-KETK-LLKKAKEKGA 236 (275)
T ss_dssp S-----------CEEECSCGGGTG-GGCSEEEECSSTTSSTTCCCSSCGGGCCTT-SEEEESSS-SCCH-HHHHHHHTTC
T ss_pred c-----------CCeeehhHHhhh-cCCCEEEEeCCCCCCCCCCCCCCHHHcCCC-CEEEEcCC-ChHH-HHHHHHHCcC
Confidence 1 1222211 1222 47999998877543210 011 1112223 47778777 4444 3455678999
Q ss_pred EEecchhccccceeehhhhhcc
Q 008128 549 LIAPAMAAGAGGVRYSIFYSTC 570 (577)
Q Consensus 549 ~viPD~~aNAGGVivS~~Ev~~ 570 (577)
.++|..-.-.+.-+.++..+++
T Consensus 237 ~~v~g~~mlv~q~~~a~~~w~g 258 (275)
T 2hk9_A 237 KLLDGLPMLLWQGIEAFKIWNG 258 (275)
T ss_dssp EEECSHHHHHHHHHHHHHHHHC
T ss_pred EEECCHHHHHHHHHHHHHHHHC
Confidence 9999876666555555444443
No 32
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=96.62 E-value=0.04 Score=54.77 Aligned_cols=133 Identities=15% Similarity=0.118 Sum_probs=79.7
Q ss_pred chHHHHHHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcC
Q 008128 395 TGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQR 474 (577)
Q Consensus 395 TG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g 474 (577)
.+.|++..+++ .+.+++|++++|.|.|.+|+.++..|.+.|++ |.|.|. +.+++..+.+.....+
T Consensus 102 D~~G~~~~L~~----~~~~l~~k~vlViGaGg~g~a~a~~L~~~G~~-V~v~~R----------~~~~~~~la~~~~~~~ 166 (271)
T 1nyt_A 102 DGVGLLSDLER----LSFIRPGLRILLIGAGGASRGVLLPLLSLDCA-VTITNR----------TVSRAEELAKLFAHTG 166 (271)
T ss_dssp HHHHHHHHHHH----HTCCCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEECS----------SHHHHHHHHHHTGGGS
T ss_pred CHHHHHHHHHh----cCcCcCCCEEEEECCcHHHHHHHHHHHHcCCE-EEEEEC----------CHHHHHHHHHHhhccC
Confidence 47887776654 46789999999999999999999999999987 566666 2334322222111101
Q ss_pred cccccccccCCceEeCCCCccccccceeecCCcccccch--hhHhhhhccCceEEEecCCCCC-CHHHHHHHHhCCcE-E
Q 008128 475 SLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQ--SDAINLVNSGCRILVEGSNMPC-TPEAVDVLKKANVL-I 550 (577)
Q Consensus 475 ~l~~y~~~~p~a~~i~~~eil~~~cDIlIPcA~~n~It~--enA~~l~~~~akiVvEgAN~p~-T~eA~~iL~~rGI~-v 550 (577)
. ....+.+++-+..+||+|-|+.-..-.. .-...++. ...+|++-.-.|. |+ -.+..+++|+. +
T Consensus 167 ~----------~~~~~~~~~~~~~~DivVn~t~~~~~~~~~~i~~~~l~-~~~~v~D~~y~p~~t~-~~~~a~~~G~~~~ 234 (271)
T 1nyt_A 167 S----------IQALSMDELEGHEFDLIINATSSGISGDIPAIPSSLIH-PGIYCYDMFYQKGKTP-FLAWCEQRGSKRN 234 (271)
T ss_dssp S----------EEECCSGGGTTCCCSEEEECCSCGGGTCCCCCCGGGCC-TTCEEEESCCCSSCCH-HHHHHHHTTCCEE
T ss_pred C----------eeEecHHHhccCCCCEEEECCCCCCCCCCCCCCHHHcC-CCCEEEEeccCCcCCH-HHHHHHHcCCCee
Confidence 1 1111111111147999999887433210 00011122 2357888877784 55 34567889987 6
Q ss_pred ecch
Q 008128 551 APAM 554 (577)
Q Consensus 551 iPD~ 554 (577)
+++.
T Consensus 235 ~~G~ 238 (271)
T 1nyt_A 235 ADGL 238 (271)
T ss_dssp ECTH
T ss_pred cCCH
Confidence 6553
No 33
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.60 E-value=0.017 Score=59.10 Aligned_cols=53 Identities=25% Similarity=0.382 Sum_probs=44.8
Q ss_pred CCCcchHHHHHHHHHHHHHcCCCCCCceEEEEecch-HHHHHHHHHHHCCCeEEEEEcC
Q 008128 391 RTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGK-IAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 391 r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGN-VG~~aA~~L~e~GAkVVaISDs 448 (577)
-...|.+|++. +|++.+.+++|++|+|.|.|+ ||..+|..|...||+ |+|+.+
T Consensus 140 ~~PcTp~gv~~----lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAt-Vtv~hs 193 (286)
T 4a5o_A 140 LRPCTPKGIMT----LLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCT-VTVTHR 193 (286)
T ss_dssp SCCHHHHHHHH----HHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCE-EEEECT
T ss_pred CCCCCHHHHHH----HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCe-EEEEeC
Confidence 34789999765 556678999999999999876 999999999999998 677765
No 34
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.56 E-value=0.018 Score=59.25 Aligned_cols=53 Identities=19% Similarity=0.259 Sum_probs=44.7
Q ss_pred CCCcchHHHHHHHHHHHHHcCCCCCCceEEEEecch-HHHHHHHHHHHCCCeEEEEEcC
Q 008128 391 RTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGK-IAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 391 r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGN-VG~~aA~~L~e~GAkVVaISDs 448 (577)
-...|.+|++ +++++.+.++.|++|+|.|.|+ ||..+|..|...||+ |+|+++
T Consensus 144 ~~PcTp~gi~----~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAt-Vtv~hs 197 (301)
T 1a4i_A 144 FIPCTPKGCL----ELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNAT-VTTCHS 197 (301)
T ss_dssp CCCHHHHHHH----HHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE-EEEECT
T ss_pred ccCchHHHHH----HHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCe-EEEEEC
Confidence 3467888865 4556678899999999999997 899999999999999 678875
No 35
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=96.48 E-value=0.007 Score=62.59 Aligned_cols=110 Identities=14% Similarity=0.190 Sum_probs=66.6
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~ 490 (577)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++ .|. ...+.+.. .+. ++++.+
T Consensus 140 ~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~-~d~-------~~~~~~~~---~~~---------------g~~~~~ 193 (330)
T 4e5n_A 140 GTGLDNATVGFLGMGAIGLAMADRLQGWGATLQY-HEA-------KALDTQTE---QRL---------------GLRQVA 193 (330)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHTTTSCCEEEE-ECS-------SCCCHHHH---HHH---------------TEEECC
T ss_pred CCccCCCEEEEEeeCHHHHHHHHHHHHCCCEEEE-ECC-------CCCcHhHH---Hhc---------------CceeCC
Confidence 4578999999999999999999999999999764 343 32222111 110 122222
Q ss_pred CCCccccccceeecCCc-----ccccchhhHhhhhccCceEEEecCCCC-CCHHH-HHHHHhCCcE
Q 008128 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (577)
Q Consensus 491 ~~eil~~~cDIlIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~p-~T~eA-~~iL~~rGI~ 549 (577)
.++++ ..|||++-|.. .+.|+.+....+ +.++ +++.-|.++ +..+| .+.|++.+|.
T Consensus 194 l~ell-~~aDvV~l~~P~t~~t~~li~~~~l~~m-k~ga-ilIN~arg~~vd~~aL~~aL~~g~i~ 256 (330)
T 4e5n_A 194 CSELF-ASSDFILLALPLNADTLHLVNAELLALV-RPGA-LLVNPCRGSVVDEAAVLAALERGQLG 256 (330)
T ss_dssp HHHHH-HHCSEEEECCCCSTTTTTCBCHHHHTTS-CTTE-EEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred HHHHH-hhCCEEEEcCCCCHHHHHHhCHHHHhhC-CCCc-EEEECCCCchhCHHHHHHHHHhCCcc
Confidence 12222 36888877654 456666655555 3343 666666666 34444 4667666653
No 36
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=96.46 E-value=0.014 Score=60.97 Aligned_cols=110 Identities=17% Similarity=0.277 Sum_probs=71.6
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~ 490 (577)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++ . |+...+.+.. .+. ++++++
T Consensus 159 ~~~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~-~-------dr~~~~~~~~---~~~---------------g~~~~~ 212 (351)
T 3jtm_A 159 AYDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLY-H-------DRLQMAPELE---KET---------------GAKFVE 212 (351)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHGGGCCEEEE-E-------CSSCCCHHHH---HHH---------------CCEECS
T ss_pred cccccCCEEeEEEeCHHHHHHHHHHHHCCCEEEE-e-------CCCccCHHHH---HhC---------------CCeEcC
Confidence 5689999999999999999999999999999653 3 3333333221 110 122222
Q ss_pred C-CCccccccceeecCCc-----ccccchhhHhhhhccCceEEEecCCCC-CCHHH-HHHHHhCCcE
Q 008128 491 E-AKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (577)
Q Consensus 491 ~-~eil~~~cDIlIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~p-~T~eA-~~iL~~rGI~ 549 (577)
. +++ -..|||++-|.. .+.|+.+....+ +.+ .+++.-|.++ +..+| .+.|++..|.
T Consensus 213 ~l~el-l~~aDvV~l~~Plt~~t~~li~~~~l~~m-k~g-ailIN~aRG~~vde~aL~~aL~~g~i~ 276 (351)
T 3jtm_A 213 DLNEM-LPKCDVIVINMPLTEKTRGMFNKELIGKL-KKG-VLIVNNARGAIMERQAVVDAVESGHIG 276 (351)
T ss_dssp CHHHH-GGGCSEEEECSCCCTTTTTCBSHHHHHHS-CTT-EEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred CHHHH-HhcCCEEEECCCCCHHHHHhhcHHHHhcC-CCC-CEEEECcCchhhCHHHHHHHHHhCCcc
Confidence 1 122 247899887754 357777766665 334 4777777777 44444 4778877765
No 37
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=96.45 E-value=0.0087 Score=61.29 Aligned_cols=37 Identities=27% Similarity=0.222 Sum_probs=32.4
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++ .|.
T Consensus 137 ~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~-~d~ 173 (313)
T 2ekl_A 137 GLELAGKTIGIVGFGRIGTKVGIIANAMGMKVLA-YDI 173 (313)
T ss_dssp CCCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEE-ECS
T ss_pred CCCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEE-ECC
Confidence 4689999999999999999999999999999754 444
No 38
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=96.45 E-value=0.02 Score=58.41 Aligned_cols=53 Identities=21% Similarity=0.258 Sum_probs=43.7
Q ss_pred CCCcchHHHHHHHHHHHHHcCCCCCCceEEEEecch-HHHHHHHHHHHC--CCeEEEEEcC
Q 008128 391 RTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGK-IAMHVLEKLIAY--GAIPVSVSDA 448 (577)
Q Consensus 391 r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGN-VG~~aA~~L~e~--GAkVVaISDs 448 (577)
-...|.+|++..++ +.+.+++|++++|.|.|+ ||..+|..|... |++ |+++++
T Consensus 137 ~~PcTp~gi~~ll~----~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~at-Vtv~h~ 192 (281)
T 2c2x_A 137 PLPCTPRGIVHLLR----RYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENAT-VTLCHT 192 (281)
T ss_dssp CCCHHHHHHHHHHH----HTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCE-EEEECT
T ss_pred CCCChHHHHHHHHH----HcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCE-EEEEEC
Confidence 34689888765554 458899999999999997 699999999999 888 667765
No 39
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=96.43 E-value=0.0089 Score=60.94 Aligned_cols=105 Identities=12% Similarity=0.108 Sum_probs=64.8
Q ss_pred CCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC
Q 008128 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (577)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~ 491 (577)
.++.|+||.|.|+|++|+.+|+.|...|.+|++. |.+. +-.+ ..+..+.
T Consensus 118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~-dr~~-----~~~~-------------------------~~~~~~~ 166 (290)
T 3gvx_A 118 TLLYGKALGILGYGGIGRRVAHLAKAFGMRVIAY-TRSS-----VDQN-------------------------VDVISES 166 (290)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCEEEEE-CSSC-----CCTT-------------------------CSEECSS
T ss_pred eeeecchheeeccCchhHHHHHHHHhhCcEEEEE-eccc-----cccc-------------------------cccccCC
Confidence 4689999999999999999999999999997654 4311 1000 0011111
Q ss_pred CCccccccceeecCCc-----ccccchhhHhhhhccCceEEEecCCCC-CCHHH-HHHHHhCCcE
Q 008128 492 AKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (577)
Q Consensus 492 ~eil~~~cDIlIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~p-~T~eA-~~iL~~rGI~ 549 (577)
-+-+-..|||++-|.. .+.|+.+....+ +.++ +|+.-+-++ +..+| .+.|++.+|.
T Consensus 167 l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~m-k~ga-ilIN~aRG~~vd~~aL~~aL~~g~i~ 229 (290)
T 3gvx_A 167 PADLFRQSDFVLIAIPLTDKTRGMVNSRLLANA-RKNL-TIVNVARADVVSKPDMIGFLKERSDV 229 (290)
T ss_dssp HHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTC-CTTC-EEEECSCGGGBCHHHHHHHHHHCTTC
T ss_pred hHHHhhccCeEEEEeeccccchhhhhHHHHhhh-hcCc-eEEEeehhcccCCcchhhhhhhccce
Confidence 0011236888876654 455666665555 3345 566666665 44444 4777777653
No 40
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=96.43 E-value=0.0041 Score=64.25 Aligned_cols=124 Identities=14% Similarity=0.159 Sum_probs=78.0
Q ss_pred ceEEEEecchHHHHHHHHHHHC--------CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceE
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY--------GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY 488 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~--------GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~ 488 (577)
.+|.|.|+|+||+..++.|.+. +.+|++|+|++.....+. +|.+.+ .+.... +.+..+ .+. .
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~-~~~~~~---~~~~~~-~~~~~~----~~~-~ 76 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNER-IDIGKV---ISYKEK-GSLDSL----EYE-S 76 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTT-CCHHHH---HHHHHT-TCGGGC----CSE-E
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcc-cChHHH---hhhhcc-CCcccc----cCC-C
Confidence 5899999999999999998764 479999999987766654 664432 111111 222111 000 0
Q ss_pred eCCCCccccccceeecCCccc---ccchhhHhhhhccCceEEEecCCC-CCCHHHHHHH---HhCCcEEec
Q 008128 489 YDEAKPWNERCDVAFPCASQN---EIDQSDAINLVNSGCRILVEGSNM-PCTPEAVDVL---KKANVLIAP 552 (577)
Q Consensus 489 i~~~eil~~~cDIlIPcA~~n---~It~enA~~l~~~~akiVvEgAN~-p~T~eA~~iL---~~rGI~viP 552 (577)
.+.+++++.++||++-|+..+ ....+.+.+.+++|..+|++ |= |+..++.+++ +++|+.+.=
T Consensus 77 ~d~~~ll~~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhVvta--nK~pla~~~~eL~~~A~~~gv~~~~ 145 (331)
T 3c8m_A 77 ISASEALARDFDIVVDATPASADGKKELAFYKETFENGKDVVTA--NKSGLANFWPEIMEYARSNNRRIRY 145 (331)
T ss_dssp CCHHHHHHSSCSEEEECSCCCSSSHHHHHHHHHHHHTTCEEEEC--CCHHHHHHHHHHHHHHHHHTCCEEC
T ss_pred CCHHHHhCCCCCEEEECCCCCCccchHHHHHHHHHHCCCeEEec--CchhhHHHHHHHHHHHHHcCCEEEE
Confidence 122334455899999999875 34456666777889999983 32 2344454433 567876643
No 41
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=96.43 E-value=0.009 Score=62.59 Aligned_cols=110 Identities=16% Similarity=0.258 Sum_probs=67.6
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCe-EEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEe
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAI-PVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAk-VVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i 489 (577)
+.++.|+||.|.|+|++|+.+|+.|...|++ |++ .|. .....+.. . .. ++...
T Consensus 159 ~~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~-~d~-------~~~~~~~~---~----~~-----------g~~~~ 212 (364)
T 2j6i_A 159 AYDIEGKTIATIGAGRIGYRVLERLVPFNPKELLY-YDY-------QALPKDAE---E----KV-----------GARRV 212 (364)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEE-ECS-------SCCCHHHH---H----HT-----------TEEEC
T ss_pred cccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEE-ECC-------CccchhHH---H----hc-----------CcEec
Confidence 5689999999999999999999999999997 754 343 22222111 0 11 12222
Q ss_pred CC-CCccccccceeecCCcc-----cccchhhHhhhhccCceEEEecCCCC-CCHHH-HHHHHhCCcE
Q 008128 490 DE-AKPWNERCDVAFPCASQ-----NEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (577)
Q Consensus 490 ~~-~eil~~~cDIlIPcA~~-----n~It~enA~~l~~~~akiVvEgAN~p-~T~eA-~~iL~~rGI~ 549 (577)
+. ++++ ..|||++.|... +.|+.+....+ +.++ +|+.-|.++ +..+| .+.|++.+|.
T Consensus 213 ~~l~ell-~~aDvV~l~~P~t~~t~~li~~~~l~~m-k~ga-~lIn~arG~~vd~~aL~~aL~~g~i~ 277 (364)
T 2j6i_A 213 ENIEELV-AQADIVTVNAPLHAGTKGLINKELLSKF-KKGA-WLVNTARGAICVAEDVAAALESGQLR 277 (364)
T ss_dssp SSHHHHH-HTCSEEEECCCCSTTTTTCBCHHHHTTS-CTTE-EEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred CCHHHHH-hcCCEEEECCCCChHHHHHhCHHHHhhC-CCCC-EEEECCCCchhCHHHHHHHHHcCCCc
Confidence 11 1222 378999888664 45665554544 3344 555566665 45554 4777777654
No 42
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.38 E-value=0.033 Score=56.33 Aligned_cols=131 Identities=17% Similarity=0.144 Sum_probs=79.9
Q ss_pred hHHHHHHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCc
Q 008128 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (577)
Q Consensus 396 G~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~ 475 (577)
|+|.+.++ +..+.+++|++++|.|.|.+|+.++..|.+.|++-|.|.+. +.++...+.+.....+.
T Consensus 110 ~~G~~~~L----~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R----------~~~~a~~la~~~~~~~~ 175 (281)
T 3o8q_A 110 GEGLVQDL----LAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNR----------TFAKAEQLAELVAAYGE 175 (281)
T ss_dssp HHHHHHHH----HHTTCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEES----------SHHHHHHHHHHHGGGSC
T ss_pred HHHHHHHH----HHhCCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEEC----------CHHHHHHHHHHhhccCC
Confidence 66766665 45678899999999999999999999999999744677776 23343333322111111
Q ss_pred ccccccccCCceEeCCCCccccccceeecCCcccccchh---hHhhhhccCceEEEecCCCC-CCHHHHHHHHhCCcE-E
Q 008128 476 LRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQS---DAINLVNSGCRILVEGSNMP-CTPEAVDVLKKANVL-I 550 (577)
Q Consensus 476 l~~y~~~~p~a~~i~~~eil~~~cDIlIPcA~~n~It~e---nA~~l~~~~akiVvEgAN~p-~T~eA~~iL~~rGI~-v 550 (577)
....+.+++ ..++||+|-|+.-...... ....+ . ...+|++-.-.| .|+-. +..+++|+. +
T Consensus 176 ----------~~~~~~~~l-~~~aDiIInaTp~gm~~~~~~l~~~~l-~-~~~~V~DlvY~P~~T~ll-~~A~~~G~~~~ 241 (281)
T 3o8q_A 176 ----------VKAQAFEQL-KQSYDVIINSTSASLDGELPAIDPVIF-S-SRSVCYDMMYGKGYTVFN-QWARQHGCAQA 241 (281)
T ss_dssp ----------EEEEEGGGC-CSCEEEEEECSCCCC----CSCCGGGE-E-EEEEEEESCCCSSCCHHH-HHHHHTTCSEE
T ss_pred ----------eeEeeHHHh-cCCCCEEEEcCcCCCCCCCCCCCHHHh-C-cCCEEEEecCCCccCHHH-HHHHHCCCCEE
Confidence 111111122 2579999977654321110 11223 2 346888988778 46643 556889986 6
Q ss_pred ecch
Q 008128 551 APAM 554 (577)
Q Consensus 551 iPD~ 554 (577)
+.+.
T Consensus 242 ~~Gl 245 (281)
T 3o8q_A 242 IDGL 245 (281)
T ss_dssp ECTH
T ss_pred ECcH
Confidence 6653
No 43
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=96.34 E-value=0.0055 Score=63.52 Aligned_cols=108 Identities=17% Similarity=0.186 Sum_probs=64.8
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~ 490 (577)
+.+|.|+||.|.|+|++|+.+|+.|...|.+|++. |. ..- +. .. + . +.++.+
T Consensus 136 ~~~l~g~tvgIiG~G~IG~~vA~~l~~~G~~V~~~-d~-------~~~---~~---~~--~-~-----------g~~~~~ 187 (334)
T 2pi1_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCY-DV-------VKR---ED---LK--E-K-----------GCVYTS 187 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEE-CS-------SCC---HH---HH--H-T-----------TCEECC
T ss_pred ceeccCceEEEECcCHHHHHHHHHHHHCcCEEEEE-CC-------Ccc---hh---hH--h-c-----------CceecC
Confidence 45789999999999999999999999999997643 33 221 10 00 0 0 122222
Q ss_pred CCCccccccceeecCCc-----ccccchhhHhhhhccCceEEEecCCCC-CCHHH-HHHHHhCCcE
Q 008128 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (577)
Q Consensus 491 ~~eil~~~cDIlIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~p-~T~eA-~~iL~~rGI~ 549 (577)
.++++ ..|||++-|.. .+.|+.+....+ +.++ +++.-|-++ +..+| .+.|++..|.
T Consensus 188 l~ell-~~aDvV~l~~P~t~~t~~li~~~~l~~m-k~ga-ilIN~aRg~~vd~~aL~~aL~~g~i~ 250 (334)
T 2pi1_A 188 LDELL-KESDVISLHVPYTKETHHMINEERISLM-KDGV-YLINTARGKVVDTDALYRAYQRGKFS 250 (334)
T ss_dssp HHHHH-HHCSEEEECCCCCTTTTTCBCHHHHHHS-CTTE-EEEECSCGGGBCHHHHHHHHHTTCEE
T ss_pred HHHHH-hhCCEEEEeCCCChHHHHhhCHHHHhhC-CCCc-EEEECCCCcccCHHHHHHHHHhCCce
Confidence 12222 36888877643 456766666655 3343 566666655 34444 4666655543
No 44
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=96.33 E-value=0.013 Score=62.22 Aligned_cols=52 Identities=13% Similarity=0.082 Sum_probs=41.5
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEE
Q 008128 394 ATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 394 ATG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaI 445 (577)
+++--++..+-.+.+..+.++.|+||.|.|+|++|+.+|+.|...|.+|++.
T Consensus 97 ~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~ 148 (381)
T 3oet_A 97 AVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEALGIRTLLC 148 (381)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred hhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEE
Confidence 3444444444555566789999999999999999999999999999997654
No 45
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=96.31 E-value=0.012 Score=60.74 Aligned_cols=37 Identities=24% Similarity=0.346 Sum_probs=32.3
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++ .|.
T Consensus 141 ~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~-~d~ 177 (331)
T 1xdw_A 141 SKEVRNCTVGVVGLGRIGRVAAQIFHGMGATVIG-EDV 177 (331)
T ss_dssp CCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEE-ECS
T ss_pred ccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEE-ECC
Confidence 4578999999999999999999999999999654 444
No 46
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=96.30 E-value=0.0061 Score=62.68 Aligned_cols=108 Identities=9% Similarity=0.140 Sum_probs=65.2
Q ss_pred CCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC
Q 008128 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (577)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~ 491 (577)
.++.|++|.|.|+|++|+.+|+.|...|.+|++ .|.+ ++ ..+. .. .. +.++.+.
T Consensus 151 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~-~d~~-----~~--~~~~------~~-~~-----------g~~~~~l 204 (330)
T 2gcg_A 151 YGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFL-YTGR-----QP--RPEE------AA-EF-----------QAEFVST 204 (330)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHGGGTCCEEE-EESS-----SC--CHHH------HH-TT-----------TCEECCH
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEE-ECCC-----Cc--chhH------HH-hc-----------CceeCCH
Confidence 578999999999999999999999999999654 4431 11 1111 11 00 1222211
Q ss_pred CCccccccceeecCCcc-----cccchhhHhhhhccCceEEEecCCCC-CCHHH-HHHHHhCCc
Q 008128 492 AKPWNERCDVAFPCASQ-----NEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANV 548 (577)
Q Consensus 492 ~eil~~~cDIlIPcA~~-----n~It~enA~~l~~~~akiVvEgAN~p-~T~eA-~~iL~~rGI 548 (577)
+++ -.+||+++.|... +.++.+....+ +.++ +|+.-+.++ ++.++ .+.|++.+|
T Consensus 205 ~e~-l~~aDvVi~~vp~~~~t~~~i~~~~~~~m-k~ga-ilIn~srg~~v~~~aL~~aL~~~~i 265 (330)
T 2gcg_A 205 PEL-AAQSDFIVVACSLTPATEGLCNKDFFQKM-KETA-VFINISRGDVVNQDDLYQALASGKI 265 (330)
T ss_dssp HHH-HHHCSEEEECCCCCTTTTTCBSHHHHHHS-CTTC-EEEECSCGGGBCHHHHHHHHHHTSS
T ss_pred HHH-HhhCCEEEEeCCCChHHHHhhCHHHHhcC-CCCc-EEEECCCCcccCHHHHHHHHHcCCc
Confidence 112 2479999888753 44554444444 3455 555666665 45444 577777655
No 47
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.30 E-value=0.036 Score=55.19 Aligned_cols=128 Identities=16% Similarity=0.135 Sum_probs=78.7
Q ss_pred hHHHHHHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCc
Q 008128 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (577)
Q Consensus 396 G~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~ 475 (577)
+.|++..++ ..+.++++++++|.|.|.+|+.++..|.+.|++ |.|.+. +.+++..+.+.....+.
T Consensus 103 ~~G~~~~L~----~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~-v~v~~R----------~~~~a~~l~~~~~~~~~ 167 (272)
T 1p77_A 103 GIGLVTDLQ----RLNWLRPNQHVLILGAGGATKGVLLPLLQAQQN-IVLANR----------TFSKTKELAERFQPYGN 167 (272)
T ss_dssp HHHHHHHHH----HTTCCCTTCEEEEECCSHHHHTTHHHHHHTTCE-EEEEES----------SHHHHHHHHHHHGGGSC
T ss_pred HHHHHHHHH----HhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCE-EEEEEC----------CHHHHHHHHHHccccCC
Confidence 677776654 457789999999999999999999999999977 667776 23343333322111111
Q ss_pred ccccccccCCceEeCCCCccccccceeecCCcccc------cchhhHhhhhccCceEEEecCCCC-C-CHHHHHHHHhCC
Q 008128 476 LRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNE------IDQSDAINLVNSGCRILVEGSNMP-C-TPEAVDVLKKAN 547 (577)
Q Consensus 476 l~~y~~~~p~a~~i~~~eil~~~cDIlIPcA~~n~------It~enA~~l~~~~akiVvEgAN~p-~-T~eA~~iL~~rG 547 (577)
+ ...+.+++-..++||+|-|+.-.. ++.+ .+ . ...+|++-.-.| . |+- .+..+++|
T Consensus 168 ~----------~~~~~~~~~~~~~DivIn~t~~~~~~~~~~i~~~---~l-~-~~~~v~D~~y~p~~~t~l-l~~a~~~G 231 (272)
T 1p77_A 168 I----------QAVSMDSIPLQTYDLVINATSAGLSGGTASVDAE---IL-K-LGSAFYDMQYAKGTDTPF-IALCKSLG 231 (272)
T ss_dssp E----------EEEEGGGCCCSCCSEEEECCCC-------CCCHH---HH-H-HCSCEEESCCCTTSCCHH-HHHHHHTT
T ss_pred e----------EEeeHHHhccCCCCEEEECCCCCCCCCCCCCCHH---Hc-C-CCCEEEEeeCCCCcCCHH-HHHHHHcC
Confidence 1 111111111137999999887443 2222 12 1 235788887777 3 664 45678899
Q ss_pred cE-Eecch
Q 008128 548 VL-IAPAM 554 (577)
Q Consensus 548 I~-viPD~ 554 (577)
+. ++++.
T Consensus 232 ~~~~v~G~ 239 (272)
T 1p77_A 232 LTNVSDGF 239 (272)
T ss_dssp CCCEECSH
T ss_pred CCEeeCCH
Confidence 97 88764
No 48
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=96.24 E-value=0.018 Score=59.73 Aligned_cols=111 Identities=19% Similarity=0.226 Sum_probs=67.1
Q ss_pred cCCCCCCceEEEEecchHHHHHHHHHH-HCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceE
Q 008128 410 MNKELKGLRCVVSGSGKIAMHVLEKLI-AYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY 488 (577)
Q Consensus 410 ~g~~l~GkrVaIQGfGNVG~~aA~~L~-e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~ 488 (577)
.+.++.|++|.|.|+|++|+.+|+.|. ..|.+|+ +.|. +.-..+.. .+. +.++
T Consensus 157 ~~~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~-~~d~-------~~~~~~~~---~~~---------------g~~~ 210 (348)
T 2w2k_A 157 SAHNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLV-YYDV-------APADAETE---KAL---------------GAER 210 (348)
T ss_dssp TCCCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEE-EECS-------SCCCHHHH---HHH---------------TCEE
T ss_pred cCcCCCCCEEEEEEECHHHHHHHHHHHHhcCCEEE-EECC-------CCcchhhH---hhc---------------CcEE
Confidence 467899999999999999999999999 9999965 4444 22122111 110 1222
Q ss_pred eCC-CCccccccceeecCCcc-----cccchhhHhhhhccCceEEEecCCCC-CCHHH-HHHHHhCCcE
Q 008128 489 YDE-AKPWNERCDVAFPCASQ-----NEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (577)
Q Consensus 489 i~~-~eil~~~cDIlIPcA~~-----n~It~enA~~l~~~~akiVvEgAN~p-~T~eA-~~iL~~rGI~ 549 (577)
.+. +++ -.+|||++.|... +.|+.+....+ +.++ +|+.-+.++ ++.++ .+.|++..|.
T Consensus 211 ~~~l~el-l~~aDvVil~vp~~~~t~~li~~~~l~~m-k~ga-ilin~srg~~vd~~aL~~aL~~~~i~ 276 (348)
T 2w2k_A 211 VDSLEEL-ARRSDCVSVSVPYMKLTHHLIDEAFFAAM-KPGS-RIVNTARGPVISQDALIAALKSGKLL 276 (348)
T ss_dssp CSSHHHH-HHHCSEEEECCCCSGGGTTCBCHHHHHHS-CTTE-EEEECSCGGGBCHHHHHHHHHTTSEE
T ss_pred eCCHHHH-hccCCEEEEeCCCChHHHHHhhHHHHhcC-CCCC-EEEECCCCchhCHHHHHHHHHhCCce
Confidence 211 112 2379999988653 45555555544 4455 445566665 45444 4667665543
No 49
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.24 E-value=0.063 Score=54.03 Aligned_cols=132 Identities=17% Similarity=0.179 Sum_probs=79.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCc
Q 008128 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (577)
Q Consensus 396 G~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~ 475 (577)
++|.+.+ +|+..+.+++|++++|.|.|.+|+.++..|.+.|++-|.|.+. +.++...+.+.. +.
T Consensus 103 ~~G~~~~---lL~~~~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R----------~~~~a~~la~~~---~~ 166 (272)
T 3pwz_A 103 GIGLLRD---IEENLGEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANR----------DMAKALALRNEL---DH 166 (272)
T ss_dssp HHHHHHH---HHTTSCCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECS----------CHHHHHHHHHHH---CC
T ss_pred HHHHHHH---HHHHcCCCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeC----------CHHHHHHHHHHh---cc
Confidence 5665554 2455678899999999999999999999999999744677776 233433232211 11
Q ss_pred ccccccccCCceEeCCCCccccccceeecCCcccccch---hhHhhhhccCceEEEecCCCCC-CHHHHHHHHhCCcE-E
Q 008128 476 LRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQ---SDAINLVNSGCRILVEGSNMPC-TPEAVDVLKKANVL-I 550 (577)
Q Consensus 476 l~~y~~~~p~a~~i~~~eil~~~cDIlIPcA~~n~It~---enA~~l~~~~akiVvEgAN~p~-T~eA~~iL~~rGI~-v 550 (577)
. ....++-+++-..++||+|-|+.-..-.. -....+ + ...+|++-.-.|. |+ -.+.-+++|+. +
T Consensus 167 -~-------~~~~~~~~~l~~~~~DivInaTp~gm~~~~~~i~~~~l-~-~~~~V~DlvY~P~~T~-ll~~A~~~G~~~~ 235 (272)
T 3pwz_A 167 -S-------RLRISRYEALEGQSFDIVVNATSASLTADLPPLPADVL-G-EAALAYELAYGKGLTP-FLRLAREQGQARL 235 (272)
T ss_dssp -T-------TEEEECSGGGTTCCCSEEEECSSGGGGTCCCCCCGGGG-T-TCSEEEESSCSCCSCH-HHHHHHHHSCCEE
T ss_pred -C-------CeeEeeHHHhcccCCCEEEECCCCCCCCCCCCCCHHHh-C-cCCEEEEeecCCCCCH-HHHHHHHCCCCEE
Confidence 0 11122212221267999997765332110 011223 2 4568899888884 65 44456788986 6
Q ss_pred ecch
Q 008128 551 APAM 554 (577)
Q Consensus 551 iPD~ 554 (577)
+.+.
T Consensus 236 ~~Gl 239 (272)
T 3pwz_A 236 ADGV 239 (272)
T ss_dssp ECTH
T ss_pred ECCH
Confidence 6653
No 50
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.19 E-value=0.035 Score=56.51 Aligned_cols=51 Identities=12% Similarity=0.063 Sum_probs=43.4
Q ss_pred CCCcchHHHHHHHHHHHHHcCCCCCCceEEEEecch-HHHHHHHHHHHCCCeEEEEEcC
Q 008128 391 RTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGK-IAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 391 r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGN-VG~~aA~~L~e~GAkVVaISDs 448 (577)
-...|.+|++..++.. + ++|++|+|.|.|+ ||..+|..|...|++ |+++++
T Consensus 131 ~~PcTp~gv~~lL~~~----~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAt-Vtv~~~ 182 (276)
T 3ngx_A 131 LVPATPRAVIDIMDYY----G--YHENTVTIVNRSPVVGRPLSMMLLNRNYT-VSVCHS 182 (276)
T ss_dssp SCCHHHHHHHHHHHHH----T--CCSCEEEEECCCTTTHHHHHHHHHHTTCE-EEEECT
T ss_pred CCCCcHHHHHHHHHHh----C--cCCCEEEEEcCChHHHHHHHHHHHHCCCe-EEEEeC
Confidence 4578999998766654 4 9999999999986 899999999999999 678776
No 51
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=96.18 E-value=0.0091 Score=60.99 Aligned_cols=108 Identities=21% Similarity=0.211 Sum_probs=64.9
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~ 490 (577)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++ .|. .. +.+. .. .. ++++.+
T Consensus 137 ~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~-~d~-------~~-~~~~------~~-~~-----------g~~~~~ 189 (307)
T 1wwk_A 137 GIELEGKTIGIIGFGRIGYQVAKIANALGMNILL-YDP-------YP-NEER------AK-EV-----------NGKFVD 189 (307)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEE-ECS-------SC-CHHH------HH-HT-----------TCEECC
T ss_pred CcccCCceEEEEccCHHHHHHHHHHHHCCCEEEE-ECC-------CC-Chhh------Hh-hc-----------CccccC
Confidence 3579999999999999999999999999999654 443 21 1111 00 01 122222
Q ss_pred CCCccccccceeecCCc-----ccccchhhHhhhhccCceEEEecCCCC-CCHHH-HHHHHhCCc
Q 008128 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANV 548 (577)
Q Consensus 491 ~~eil~~~cDIlIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~p-~T~eA-~~iL~~rGI 548 (577)
.++++ ..||+++-|.. .+.|+.+....+ +.++- ++.-+-++ +..++ .+.|++..|
T Consensus 190 l~ell-~~aDvV~l~~p~~~~t~~li~~~~l~~m-k~ga~-lin~arg~~vd~~aL~~aL~~g~i 251 (307)
T 1wwk_A 190 LETLL-KESDVVTIHVPLVESTYHLINEERLKLM-KKTAI-LINTSRGPVVDTNALVKALKEGWI 251 (307)
T ss_dssp HHHHH-HHCSEEEECCCCSTTTTTCBCHHHHHHS-CTTCE-EEECSCGGGBCHHHHHHHHHHTSS
T ss_pred HHHHH-hhCCEEEEecCCChHHhhhcCHHHHhcC-CCCeE-EEECCCCcccCHHHHHHHHHhCCC
Confidence 12222 37899888754 345665555554 44554 44444454 45444 567776654
No 52
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=96.16 E-value=0.02 Score=59.34 Aligned_cols=106 Identities=14% Similarity=0.219 Sum_probs=65.2
Q ss_pred ceEEEEecchHHHHHHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCccccccc----ccC-Cce---
Q 008128 417 LRCVVSGSGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK----TYA-RSK--- 487 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e-~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~----~~p-~a~--- 487 (577)
.||+|.|||.+|+.+++.|.+ .+..||+|.|.. .|.+.+..|.++....+.+....+ ... +.+
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~--------~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~ 75 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPF--------IDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPIT 75 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSS--------SCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEE
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCC--------CCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEE
Confidence 489999999999999999876 468999998830 144444444433233333321100 000 111
Q ss_pred Ee---CCCCc-c-ccccceeecCCcccccchhhHhhhhccCceEEE-ecC
Q 008128 488 YY---DEAKP-W-NERCDVAFPCASQNEIDQSDAINLVNSGCRILV-EGS 531 (577)
Q Consensus 488 ~i---~~~ei-l-~~~cDIlIPcA~~n~It~enA~~l~~~~akiVv-EgA 531 (577)
.+ +++++ | +..||+++.|+. .-.+.+.|...++.|||.|. ++.
T Consensus 76 v~~~~d~~~l~~~~~~vDvV~eatg-~~~~~e~a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 76 IFQERDPSKIKWGDAGAEYVVESTG-VFTTMEKAGAHLQGGAKRVIISAP 124 (335)
T ss_dssp EECCSSGGGCCTTTTTCCEEEECSS-SCCSHHHHGGGGGGTCSEEEESSC
T ss_pred EEecCCHHHCccccCCCCEEEECCC-chhhHHHHHHHHhCCCeEEEeccC
Confidence 12 22333 6 358999999874 55678888888888865554 443
No 53
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.05 E-value=0.028 Score=56.40 Aligned_cols=109 Identities=11% Similarity=0.057 Sum_probs=64.0
Q ss_pred CceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceE-e-CCCC
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY-Y-DEAK 493 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~-i-~~~e 493 (577)
.++|.|.|+|++|..+|+.|.+.|..| .+.|. +.+++..+. + .|. .. . +..+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V-~~~dr----------~~~~~~~~~---~-~g~-----------~~~~~~~~e 60 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLST-WGADL----------NPQACANLL---A-EGA-----------CGAAASARE 60 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEE-EEECS----------CHHHHHHHH---H-TTC-----------SEEESSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeE-EEEEC----------CHHHHHHHH---H-cCC-----------ccccCCHHH
Confidence 468999999999999999999999985 45565 333432222 1 111 11 1 1222
Q ss_pred ccccccceeecCCcccccchhhH---hhh---hccCceEEEecCCCC-CC-HHHHHHHHhCCcEEec
Q 008128 494 PWNERCDVAFPCASQNEIDQSDA---INL---VNSGCRILVEGSNMP-CT-PEAVDVLKKANVLIAP 552 (577)
Q Consensus 494 il~~~cDIlIPcA~~n~It~enA---~~l---~~~~akiVvEgAN~p-~T-~eA~~iL~~rGI~viP 552 (577)
. -.+||++|-|........+.. +.+ ++.++ +|+..++.+ .+ .+..+.+.++|+.|+.
T Consensus 61 ~-~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~-ivv~~st~~~~~~~~~~~~~~~~g~~~~~ 125 (303)
T 3g0o_A 61 F-AGVVDALVILVVNAAQVRQVLFGEDGVAHLMKPGS-AVMVSSTISSADAQEIAAALTALNLNMLD 125 (303)
T ss_dssp T-TTTCSEEEECCSSHHHHHHHHC--CCCGGGSCTTC-EEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred H-HhcCCEEEEECCCHHHHHHHHhChhhHHhhCCCCC-EEEecCCCCHHHHHHHHHHHHHcCCeEEe
Confidence 2 247899999887643322222 222 22344 555555543 22 3445677888988764
No 54
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=96.03 E-value=0.026 Score=58.26 Aligned_cols=35 Identities=26% Similarity=0.368 Sum_probs=31.5
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEE
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaI 445 (577)
+.++.|+||.|.|+|++|+.+|+.|...|++|++.
T Consensus 140 ~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~ 174 (333)
T 1dxy_A 140 GKELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAY 174 (333)
T ss_dssp CCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEE
Confidence 46799999999999999999999999999997643
No 55
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=96.01 E-value=0.016 Score=60.14 Aligned_cols=34 Identities=24% Similarity=0.449 Sum_probs=31.1
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEE
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVS 444 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVa 444 (577)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++
T Consensus 160 ~~~l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~ 193 (335)
T 2g76_A 160 GTELNGKTLGILGLGRIGREVATRMQSFGMKTIG 193 (335)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEE
T ss_pred CcCCCcCEEEEEeECHHHHHHHHHHHHCCCEEEE
Confidence 4679999999999999999999999999999764
No 56
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.01 E-value=0.07 Score=53.96 Aligned_cols=134 Identities=15% Similarity=0.028 Sum_probs=79.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhc-C
Q 008128 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQ-R 474 (577)
Q Consensus 396 G~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~-g 474 (577)
|+|.+.+++ ..+.+++|++++|.|.|.+|+.++..|.+.|++-|.|.+. +.++...+.+..... .
T Consensus 111 ~~G~~~~l~----~~~~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R----------~~~~a~~la~~~~~~~~ 176 (283)
T 3jyo_A 111 VSGFGRGME----EGLPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADL----------DTSRAQALADVINNAVG 176 (283)
T ss_dssp HHHHHHHHH----HHCTTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECS----------SHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHH----HhCcCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEEC----------CHHHHHHHHHHHHhhcC
Confidence 567666654 3466899999999999999999999999999965777776 234443333221111 0
Q ss_pred cccccccccCCceEeCCCCccc--cccceeecCCcccccc----hhhHhhhhccCceEEEecCCCCC-CHHHHHHHHhCC
Q 008128 475 SLRDYSKTYARSKYYDEAKPWN--ERCDVAFPCASQNEID----QSDAINLVNSGCRILVEGSNMPC-TPEAVDVLKKAN 547 (577)
Q Consensus 475 ~l~~y~~~~p~a~~i~~~eil~--~~cDIlIPcA~~n~It----~enA~~l~~~~akiVvEgAN~p~-T~eA~~iL~~rG 547 (577)
.+ .....+.+++-+ .++||+|-|+.-..-. .-....| . ...+|.+-.-.|. |+= .+.-+++|
T Consensus 177 ~~--------~i~~~~~~~l~~~l~~~DiVInaTp~Gm~~~~~~pi~~~~l-~-~~~~v~DlvY~P~~T~l-l~~A~~~G 245 (283)
T 3jyo_A 177 RE--------AVVGVDARGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCL-T-KDHWVGDVVYMPIETEL-LKAARALG 245 (283)
T ss_dssp SC--------CEEEECSTTHHHHHHHSSEEEECSSTTSTTSCSCSSCGGGC-C-TTCEEEECCCSSSSCHH-HHHHHHHT
T ss_pred Cc--------eEEEcCHHHHHHHHhcCCEEEECCCCCCCCCCCCCCCHHHh-C-CCCEEEEecCCCCCCHH-HHHHHHCc
Confidence 00 111222222222 3789999776532111 0011223 2 3568899999984 543 33346778
Q ss_pred cEEecch
Q 008128 548 VLIAPAM 554 (577)
Q Consensus 548 I~viPD~ 554 (577)
+.++++.
T Consensus 246 ~~~~~Gl 252 (283)
T 3jyo_A 246 CETLDGT 252 (283)
T ss_dssp CCEECTH
T ss_pred CeEeCcH
Confidence 8766654
No 57
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=96.00 E-value=0.029 Score=58.54 Aligned_cols=108 Identities=15% Similarity=0.227 Sum_probs=68.8
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~ 490 (577)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++ . |+...+.+.. . ++++.+
T Consensus 168 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~-~-------dr~~~~~~~~---------~-----------g~~~~~ 219 (345)
T 4g2n_A 168 GMGLTGRRLGIFGMGRIGRAIATRARGFGLAIHY-H-------NRTRLSHALE---------E-----------GAIYHD 219 (345)
T ss_dssp BCCCTTCEEEEESCSHHHHHHHHHHHTTTCEEEE-E-------CSSCCCHHHH---------T-----------TCEECS
T ss_pred ccccCCCEEEEEEeChhHHHHHHHHHHCCCEEEE-E-------CCCCcchhhh---------c-----------CCeEeC
Confidence 5689999999999999999999999999999764 3 3333322110 0 122221
Q ss_pred C-CCccccccceeecCCc-----ccccchhhHhhhhccCceEEEecCCCCC-CHHH-HHHHHhCCcE
Q 008128 491 E-AKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMPC-TPEA-VDVLKKANVL 549 (577)
Q Consensus 491 ~-~eil~~~cDIlIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~p~-T~eA-~~iL~~rGI~ 549 (577)
. +++ -..|||++-|.. .+.|+.+....+ +.+ .+++.-|-+++ ..+| .+.|++..|.
T Consensus 220 ~l~el-l~~sDvV~l~~Plt~~T~~li~~~~l~~m-k~g-ailIN~aRG~~vde~aL~~aL~~g~i~ 283 (345)
T 4g2n_A 220 TLDSL-LGASDIFLIAAPGRPELKGFLDHDRIAKI-PEG-AVVINISRGDLINDDALIEALRSKHLF 283 (345)
T ss_dssp SHHHH-HHTCSEEEECSCCCGGGTTCBCHHHHHHS-CTT-EEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred CHHHH-HhhCCEEEEecCCCHHHHHHhCHHHHhhC-CCC-cEEEECCCCchhCHHHHHHHHHhCCce
Confidence 1 122 237888876654 356766666665 333 47777777774 4444 4667666553
No 58
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=95.98 E-value=0.047 Score=55.28 Aligned_cols=135 Identities=16% Similarity=0.140 Sum_probs=80.7
Q ss_pred chHHHHHHHHHHHHHcC-CCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhc
Q 008128 395 TGYGLVFFAQLILADMN-KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQ 473 (577)
Q Consensus 395 TG~GV~~~~~~~l~~~g-~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~ 473 (577)
.+.|+..+++ ..+ .+++|++|+|.|.|.+|+.++..|.+.|++-|.|.+. +.+++..+. +.-
T Consensus 123 d~~G~~~~l~----~~~~~~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR----------~~~ka~~la---~~~ 185 (297)
T 2egg_A 123 DGLGYVQALE----EEMNITLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANR----------TVEKAERLV---REG 185 (297)
T ss_dssp HHHHHHHHHH----HHTTCCCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECS----------SHHHHHHHH---HHS
T ss_pred CHHHHHHHHH----HhCCCCCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeC----------CHHHHHHHH---HHh
Confidence 4566666554 345 6899999999999999999999999999844778776 233432222 211
Q ss_pred CcccccccccCCceEeCCCCc--cccccceeecCCcccccchh---hH-hhhhccCceEEEecCCCCC-CHHHHHHHHhC
Q 008128 474 RSLRDYSKTYARSKYYDEAKP--WNERCDVAFPCASQNEIDQS---DA-INLVNSGCRILVEGSNMPC-TPEAVDVLKKA 546 (577)
Q Consensus 474 g~l~~y~~~~p~a~~i~~~ei--l~~~cDIlIPcA~~n~It~e---nA-~~l~~~~akiVvEgAN~p~-T~eA~~iL~~r 546 (577)
+.. .+ +.++-+++ .-.++||+|-|+.-...... .. ...++ .-.+|++-.-.|. |+ -.+..+++
T Consensus 186 ~~~------~~--~~~~~~~~~~~~~~aDivIn~t~~~~~~~~~~~~i~~~~l~-~~~~v~D~~y~P~~T~-ll~~A~~~ 255 (297)
T 2egg_A 186 DER------RS--AYFSLAEAETRLAEYDIIINTTSVGMHPRVEVQPLSLERLR-PGVIVSDIIYNPLETK-WLKEAKAR 255 (297)
T ss_dssp CSS------SC--CEECHHHHHHTGGGCSEEEECSCTTCSSCCSCCSSCCTTCC-TTCEEEECCCSSSSCH-HHHHHHHT
T ss_pred hhc------cC--ceeeHHHHHhhhccCCEEEECCCCCCCCCCCCCCCCHHHcC-CCCEEEEcCCCCCCCH-HHHHHHHC
Confidence 110 00 11110111 12478999988764432110 00 11122 2357888877784 54 55667889
Q ss_pred CcEEecchhc
Q 008128 547 NVLIAPAMAA 556 (577)
Q Consensus 547 GI~viPD~~a 556 (577)
|+.++++.-.
T Consensus 256 G~~~v~Gl~M 265 (297)
T 2egg_A 256 GARVQNGVGM 265 (297)
T ss_dssp TCEEECSHHH
T ss_pred cCEEECCHHH
Confidence 9999887543
No 59
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=95.98 E-value=0.014 Score=60.32 Aligned_cols=106 Identities=17% Similarity=0.265 Sum_probs=66.3
Q ss_pred CCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC
Q 008128 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (577)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~ 491 (577)
.++.|++|.|.|+|++|+.+|+.|...|.+|+ +.|.+ ++ .+.. .+ . +.++.+.
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~-~~d~~-----~~---~~~~---~~----~-----------g~~~~~l 194 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIPFGVKLY-YWSRH-----RK---VNVE---KE----L-----------KARYMDI 194 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGTCEEE-EECSS-----CC---HHHH---HH----H-----------TEEECCH
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHHCCCEEE-EECCC-----cc---hhhh---hh----c-----------CceecCH
Confidence 68999999999999999999999999999965 44541 21 1110 11 0 1122111
Q ss_pred CCccccccceeecCCccc-----ccchhhHhhhhccCceEEEecCCCCC-CHHH-HHHHHhCCc
Q 008128 492 AKPWNERCDVAFPCASQN-----EIDQSDAINLVNSGCRILVEGSNMPC-TPEA-VDVLKKANV 548 (577)
Q Consensus 492 ~eil~~~cDIlIPcA~~n-----~It~enA~~l~~~~akiVvEgAN~p~-T~eA-~~iL~~rGI 548 (577)
++++ .+||+++.|...+ .++.+....+ +.+ +++.-+.+++ +.++ .+.|++..|
T Consensus 195 ~e~l-~~aDiVil~vp~~~~t~~~i~~~~~~~m-k~g--ilin~srg~~vd~~aL~~aL~~~~i 254 (333)
T 2d0i_A 195 DELL-EKSDIVILALPLTRDTYHIINEERVKKL-EGK--YLVNIGRGALVDEKAVTEAIKQGKL 254 (333)
T ss_dssp HHHH-HHCSEEEECCCCCTTTTTSBCHHHHHHT-BTC--EEEECSCGGGBCHHHHHHHHHTTCB
T ss_pred HHHH-hhCCEEEEcCCCChHHHHHhCHHHHhhC-CCC--EEEECCCCcccCHHHHHHHHHcCCc
Confidence 1222 3799999887654 5655444444 345 7777777775 4433 467776555
No 60
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.97 E-value=0.098 Score=53.87 Aligned_cols=138 Identities=12% Similarity=0.146 Sum_probs=80.9
Q ss_pred chHHHHHHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcC
Q 008128 395 TGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQR 474 (577)
Q Consensus 395 TG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g 474 (577)
-++|.+.+++ ..+.+++|++++|.|.|-+|+.++..|.+.|++-|.|.+.+. + +.+++..+.+......
T Consensus 137 D~~Gf~~~L~----~~~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~-----~--~~~~a~~la~~~~~~~ 205 (315)
T 3tnl_A 137 DGTGYMRALK----EAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKD-----D--FYANAEKTVEKINSKT 205 (315)
T ss_dssp HHHHHHHHHH----HTTCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS-----T--THHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHH----HcCCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC-----c--hHHHHHHHHHHhhhhc
Confidence 3667666654 457899999999999999999999999999995467777631 1 1334333332111111
Q ss_pred cccccccccCCceEeCCCCc--c---ccccceeecCCcccccc---hh---hHhhhhccCceEEEecCCCCC-CHHHHHH
Q 008128 475 SLRDYSKTYARSKYYDEAKP--W---NERCDVAFPCASQNEID---QS---DAINLVNSGCRILVEGSNMPC-TPEAVDV 542 (577)
Q Consensus 475 ~l~~y~~~~p~a~~i~~~ei--l---~~~cDIlIPcA~~n~It---~e---nA~~l~~~~akiVvEgAN~p~-T~eA~~i 542 (577)
.. ....++-++. + -.++||+|-|+.-..-. .. ....| . ...+|++-.-.|. |+ -.+.
T Consensus 206 ~~--------~~~~~~~~~~~~l~~~l~~aDiIINaTp~Gm~~~~~~~p~~~~~~l-~-~~~~V~DlvY~P~~T~-ll~~ 274 (315)
T 3tnl_A 206 DC--------KAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADML-R-PELIVSDVVYKPTKTR-LLEI 274 (315)
T ss_dssp SC--------EEEEEETTCHHHHHHHHHTCSEEEECSSTTSTTSTTCCSCCCGGGC-C-TTCEEEESCCSSSSCH-HHHH
T ss_pred CC--------ceEEeccchHHHHHhhhcCCCEEEECccCCCCCCCCCCCCCcHHHc-C-CCCEEEEeccCCCCCH-HHHH
Confidence 00 0111211111 1 13789999776532111 11 12223 2 4568899999995 54 3344
Q ss_pred HHhCCcEEecch
Q 008128 543 LKKANVLIAPAM 554 (577)
Q Consensus 543 L~~rGI~viPD~ 554 (577)
-+++|+.++++.
T Consensus 275 A~~~G~~~~~Gl 286 (315)
T 3tnl_A 275 AEEQGCQTLNGL 286 (315)
T ss_dssp HHHTTCEEECSH
T ss_pred HHHCCCeEeCcH
Confidence 577888776654
No 61
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=95.94 E-value=0.028 Score=58.09 Aligned_cols=35 Identities=26% Similarity=0.421 Sum_probs=32.2
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEE
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaI 445 (577)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++.
T Consensus 132 ~~~l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~ 166 (324)
T 3evt_A 132 TSTLTGQQLLIYGTGQIGQSLAAKASALGMHVIGV 166 (324)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CccccCCeEEEECcCHHHHHHHHHHHhCCCEEEEE
Confidence 56799999999999999999999999999998764
No 62
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=95.93 E-value=0.025 Score=62.38 Aligned_cols=178 Identities=15% Similarity=0.148 Sum_probs=124.1
Q ss_pred CCHHHHHHHHHHHHHHHhhhcCCCcccCCCCCcCChhHHHHHHHHhhhhhCCccccccCccccccCCCCCCCcchHHHHH
Q 008128 322 KSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVF 401 (577)
Q Consensus 322 ~s~~Eler~~r~f~~eL~~~IGp~~DVpapDvGt~~~em~~i~~~y~~~~g~~~g~vTGKp~~~GGs~~r~eATG~GV~~ 401 (577)
.+.+|-..|...||..+.+..||..-|==.|++. ..--.|.+.|+.- .-|+. +--.-||-=+..
T Consensus 204 v~g~eyd~fvdefv~av~~~fGp~~~I~~EDf~~--~~af~il~ryr~~----ipvFn----------DDiqGTa~V~lA 267 (555)
T 1gq2_A 204 IRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFAN--ANAFRLLHKYRNK----YCTFN----------DDIQGTASVAVA 267 (555)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHCTTCEEEECSCCH--HHHHHHHHHHTTT----SEEEE----------TTTHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHhhCCCcEEeecccCC--ccHHHHHHHHhcc----CCEec----------CccchHHHHHHH
Confidence 4567888899999999998888877676778764 3444566777652 11221 222346666667
Q ss_pred HHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHH----CCC------eEEEEEcCCCeeeCCC-CCCHHhHhHHHHHH
Q 008128 402 FAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIA----YGA------IPVSVSDAKGYLVDED-GFDYMKISFLRDIK 470 (577)
Q Consensus 402 ~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e----~GA------kVVaISDs~G~Iydp~-GLD~e~L~~l~~~k 470 (577)
++-.+++-.|.+|+..||++.|.|.-|..+|+.|.. .|. +=+-+.|++|.|++.. +++..+.
T Consensus 268 gllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~G~~~eeA~~~i~~~D~~Gli~~~r~~l~~~k~------- 340 (555)
T 1gq2_A 268 GLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKE------- 340 (555)
T ss_dssp HHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECBTTCSSCCTTGG-------
T ss_pred HHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChHHHhCcEEEEECCCeeeCCCCCchHHHH-------
Confidence 788888888999999999999999999999999987 784 4478999999999753 4544321
Q ss_pred hhcCcccccccccCCceEeCC-CCcc-ccccceeecCCc-ccccchhhHhhhhc-cCceEEEecCC
Q 008128 471 SQQRSLRDYSKTYARSKYYDE-AKPW-NERCDVAFPCAS-QNEIDQSDAINLVN-SGCRILVEGSN 532 (577)
Q Consensus 471 ~~~g~l~~y~~~~p~a~~i~~-~eil-~~~cDIlIPcA~-~n~It~enA~~l~~-~~akiVvEgAN 532 (577)
.|+.... . ... .+.. .+++||||=++. .+.+|++-++.+.+ +.=.||---||
T Consensus 341 -------~~A~~~~--~-~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN 396 (555)
T 1gq2_A 341 -------HFAHEHC--E-MKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSN 396 (555)
T ss_dssp -------GGCBSCC--C-CCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCS
T ss_pred -------HHHhhcC--C-CCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCC
Confidence 1211100 0 000 1122 347999999997 69999999999853 23467777788
No 63
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=95.86 E-value=0.02 Score=59.71 Aligned_cols=112 Identities=11% Similarity=0.160 Sum_probs=68.3
Q ss_pred CCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC-C
Q 008128 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-A 492 (577)
Q Consensus 414 l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~-~ 492 (577)
++.++|.|.|+|++|..+|+.|.+.|..| .+.|. +.+++. .+.+. + + ...+. .
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V-~v~dr----------~~~~~~---~l~~~-g-~----------~~~~s~~ 73 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHEC-VVYDL----------NVNAVQ---ALERE-G-I----------AGARSIE 73 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEE-EEECS----------CHHHHH---HHHTT-T-C----------BCCSSHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEE-EEEeC----------CHHHHH---HHHHC-C-C----------EEeCCHH
Confidence 45689999999999999999999999885 45565 233432 22211 1 1 11111 1
Q ss_pred Ccccccc---ceeecCCcccccchhhHhhhhc--cCceEEEecCCCC--CCHHHHHHHHhCCcEEecc
Q 008128 493 KPWNERC---DVAFPCASQNEIDQSDAINLVN--SGCRILVEGSNMP--CTPEAVDVLKKANVLIAPA 553 (577)
Q Consensus 493 eil~~~c---DIlIPcA~~n~It~enA~~l~~--~~akiVvEgAN~p--~T~eA~~iL~~rGI~viPD 553 (577)
++. ..| ||++-|-... ...+.+..|.. ..-.+|+..+|.. .+.+..+.+.++|+.++.-
T Consensus 74 e~~-~~a~~~DvVi~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vda 139 (358)
T 4e21_A 74 EFC-AKLVKPRVVWLMVPAA-VVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDV 139 (358)
T ss_dssp HHH-HHSCSSCEEEECSCGG-GHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHH-hcCCCCCEEEEeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeC
Confidence 111 244 9999887766 33344444432 1235788888876 3455567889999988753
No 64
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=95.85 E-value=0.026 Score=62.73 Aligned_cols=178 Identities=12% Similarity=0.141 Sum_probs=123.2
Q ss_pred CCHHHHHHHHHHHHHHHhhhcCCCcccCCCCCcCChhHHHHHHHHhhhhhCCccccccCccccccCCCCCCCcchHHHHH
Q 008128 322 KSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVF 401 (577)
Q Consensus 322 ~s~~Eler~~r~f~~eL~~~IGp~~DVpapDvGt~~~em~~i~~~y~~~~g~~~g~vTGKp~~~GGs~~r~eATG~GV~~ 401 (577)
.+.+|-..|...||..+.+..||..-|==.|++. ..--.|.+.|+.-. -|+.. --.-||-=+..
T Consensus 242 v~g~~Yd~fvdefv~av~~~fGp~~~I~~EDf~~--p~af~il~ryr~~i----pvFnD----------DiqGTA~V~lA 305 (605)
T 1o0s_A 242 VRGKDYDTLLDNFMKACTKKYGQKTLIQFEDFAN--PNAFRLLDKYQDKY----TMFND----------DIQGTASVIVA 305 (605)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCH--HHHHHHHHHHTTTS----EEEEH----------HHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHhCCCcEeeHhhcCC--ccHHHHHHHhccCC----CeeCc----------ccchHHHHHHH
Confidence 3566888899999999998888877676778764 34445667776521 11211 11235666667
Q ss_pred HHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHH----CCC------eEEEEEcCCCeeeCCC-CCCHHhHhHHHHHH
Q 008128 402 FAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIA----YGA------IPVSVSDAKGYLVDED-GFDYMKISFLRDIK 470 (577)
Q Consensus 402 ~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e----~GA------kVVaISDs~G~Iydp~-GLD~e~L~~l~~~k 470 (577)
++-.+++-.|.+|+..||++.|.|.-|..+|+.|.. .|. +=+-+.|++|.|++.. +++..+.
T Consensus 306 gllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~vD~~Gli~~~r~~l~~~k~------- 378 (605)
T 1o0s_A 306 GLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQNEGISKEEACNRIYLMDIDGLVTKNRKEMNPRHV------- 378 (605)
T ss_dssp HHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTEECBTTCSSCCGGGT-------
T ss_pred HHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChhhhhCeEEEEECCCceeCCCCCchHHHH-------
Confidence 778888888999999999999999999999999987 784 4578999999999753 4544321
Q ss_pred hhcCcccccccccCCceEeCC-CCcc-ccccceeecCCc-ccccchhhHhhhhc-cCceEEEecCC
Q 008128 471 SQQRSLRDYSKTYARSKYYDE-AKPW-NERCDVAFPCAS-QNEIDQSDAINLVN-SGCRILVEGSN 532 (577)
Q Consensus 471 ~~~g~l~~y~~~~p~a~~i~~-~eil-~~~cDIlIPcA~-~n~It~enA~~l~~-~~akiVvEgAN 532 (577)
.|+..... ... .+.. .+++||||=++. .+.+|++-++.+.+ +.=.||---||
T Consensus 379 -------~~A~~~~~---~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN 434 (605)
T 1o0s_A 379 -------QFAKDMPE---TTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIFALSN 434 (605)
T ss_dssp -------TTCBSSCC---CCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEEECCS
T ss_pred -------HHHhhcCC---CCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCC
Confidence 11111000 000 1122 357999999987 69999999999853 23467777788
No 65
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=95.85 E-value=0.036 Score=58.86 Aligned_cols=109 Identities=15% Similarity=0.251 Sum_probs=66.0
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~ 490 (577)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++ .|. ..-..+.. .+ . ++++..
T Consensus 186 ~~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~-~d~-------~~~~~~~~---~~----~-----------G~~~~~ 239 (393)
T 2nac_A 186 AYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHY-TDR-------HRLPESVE---KE----L-----------NLTWHA 239 (393)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEE-ECS-------SCCCHHHH---HH----H-----------TCEECS
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEE-EcC-------CccchhhH---hh----c-----------CceecC
Confidence 5689999999999999999999999999999764 343 22111110 10 0 112111
Q ss_pred -CCCccccccceeecCCc-----ccccchhhHhhhhccCceEEEecCCCC-CCHHH-HHHHHhCCc
Q 008128 491 -EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANV 548 (577)
Q Consensus 491 -~~eil~~~cDIlIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~p-~T~eA-~~iL~~rGI 548 (577)
.+++ -..|||++-|.. .+.|+.+....+ +.++ +++.-|-++ +..+| .+.|++..|
T Consensus 240 ~l~el-l~~aDvV~l~~Plt~~t~~li~~~~l~~m-k~ga-ilIN~aRG~~vde~aL~~aL~~g~i 302 (393)
T 2nac_A 240 TREDM-YPVCDVVTLNCPLHPETEHMINDETLKLF-KRGA-YIVNTARGKLCDRDAVARALESGRL 302 (393)
T ss_dssp SHHHH-GGGCSEEEECSCCCTTTTTCBSHHHHTTS-CTTE-EEEECSCGGGBCHHHHHHHHHTTSE
T ss_pred CHHHH-HhcCCEEEEecCCchHHHHHhhHHHHhhC-CCCC-EEEECCCchHhhHHHHHHHHHcCCe
Confidence 1122 247899887754 456666555555 3344 556666665 45444 466766554
No 66
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.82 E-value=0.056 Score=48.60 Aligned_cols=39 Identities=26% Similarity=0.308 Sum_probs=30.1
Q ss_pred HcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 409 DMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 409 ~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
++..++.+++|+|.|+|.+|+.+++.|.+.|.+|+.+ |.
T Consensus 12 ~~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vi-d~ 50 (155)
T 2g1u_A 12 HMSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVV-DK 50 (155)
T ss_dssp -----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEE-ES
T ss_pred hhhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEE-EC
Confidence 3456788899999999999999999999999986644 44
No 67
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=95.81 E-value=0.013 Score=58.73 Aligned_cols=113 Identities=20% Similarity=0.221 Sum_probs=71.4
Q ss_pred CCceEEEEecchHHHH-HHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCC
Q 008128 415 KGLRCVVSGSGKIAMH-VLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEA 492 (577)
Q Consensus 415 ~GkrVaIQGfGNVG~~-aA~~L~e-~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~ 492 (577)
+-.||.|.|+|++|.. .++.|.+ .++.+++|+|. |.+++ .+..+..+ +. .+-+.+
T Consensus 5 ~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~----------~~~~~---~~~a~~~~-~~---------~~~~~~ 61 (308)
T 3uuw_A 5 KNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTP----------NKVKR---EKICSDYR-IM---------PFDSIE 61 (308)
T ss_dssp CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECS----------CHHHH---HHHHHHHT-CC---------BCSCHH
T ss_pred ccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECC----------CHHHH---HHHHHHcC-CC---------CcCCHH
Confidence 3479999999999985 7887776 57899999997 33343 22222211 11 011224
Q ss_pred CccccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCC-HHHH---HHHHhCCcEEecc
Q 008128 493 KPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCT-PEAV---DVLKKANVLIAPA 553 (577)
Q Consensus 493 eil~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T-~eA~---~iL~~rGI~viPD 553 (577)
+++. ++|+++=|. .+..+.+.+...++.+..+++|=- +.+| .+++ +..+++|+.+...
T Consensus 62 ~ll~-~~D~V~i~t-p~~~h~~~~~~al~~gk~vl~EKP-~~~~~~~~~~l~~~a~~~g~~~~v~ 123 (308)
T 3uuw_A 62 SLAK-KCDCIFLHS-STETHYEIIKILLNLGVHVYVDKP-LASTVSQGEELIELSTKKNLNLMVG 123 (308)
T ss_dssp HHHT-TCSEEEECC-CGGGHHHHHHHHHHTTCEEEECSS-SSSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred HHHh-cCCEEEEeC-CcHhHHHHHHHHHHCCCcEEEcCC-CCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 4556 899999765 455677777778888999999841 1123 3444 3345667766544
No 68
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=95.80 E-value=0.026 Score=58.88 Aligned_cols=35 Identities=29% Similarity=0.347 Sum_probs=31.7
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEE
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaI 445 (577)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++.
T Consensus 143 ~~~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~ 177 (343)
T 2yq5_A 143 SNEIYNLTVGLIGVGHIGSAVAEIFSAMGAKVIAY 177 (343)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccccCCCeEEEEecCHHHHHHHHHHhhCCCEEEEE
Confidence 46789999999999999999999999999997654
No 69
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=95.78 E-value=0.079 Score=53.75 Aligned_cols=126 Identities=21% Similarity=0.206 Sum_probs=77.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCc
Q 008128 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (577)
Q Consensus 396 G~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~ 475 (577)
|+|.+.+++ ..+.+++|++++|.|.|.+|+.++..|.+.|++-|.|.+. +.++. .++.+ .
T Consensus 106 ~~G~~~~L~----~~~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nR----------t~~ka---~~La~---~ 165 (282)
T 3fbt_A 106 YIGFGKMLS----KFRVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTR----------NPEKT---SEIYG---E 165 (282)
T ss_dssp HHHHHHHHH----HTTCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEES----------CHHHH---HHHCT---T
T ss_pred HHHHHHHHH----HcCCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeC----------CHHHH---HHHHH---h
Confidence 566665554 4578899999999999999999999999999955777776 23332 12211 1
Q ss_pred ccccccccCCceEeCCCCccccccceeecCCcccccch-----hhHhhhhccCceEEEecCCCCC-CHHHHHHHHhCCcE
Q 008128 476 LRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQ-----SDAINLVNSGCRILVEGSNMPC-TPEAVDVLKKANVL 549 (577)
Q Consensus 476 l~~y~~~~p~a~~i~~~eil~~~cDIlIPcA~~n~It~-----enA~~l~~~~akiVvEgAN~p~-T~eA~~iL~~rGI~ 549 (577)
+... .+ ..+ .+ + ++||+|-|+.-..-.. -....| + ...+|.+-.-+|. |+ -.+.-+++|+.
T Consensus 166 ~~~~--~~---~~l--~~-l--~~DivInaTp~Gm~~~~~~~pi~~~~l-~-~~~~v~DlvY~P~~T~-ll~~A~~~G~~ 232 (282)
T 3fbt_A 166 FKVI--SY---DEL--SN-L--KGDVIINCTPKGMYPKEGESPVDKEVV-A-KFSSAVDLIYNPVETL-FLKYARESGVK 232 (282)
T ss_dssp SEEE--EH---HHH--TT-C--CCSEEEECSSTTSTTSTTCCSSCHHHH-T-TCSEEEESCCSSSSCH-HHHHHHHTTCE
T ss_pred cCcc--cH---HHH--Hh-c--cCCEEEECCccCccCCCccCCCCHHHc-C-CCCEEEEEeeCCCCCH-HHHHHHHCcCe
Confidence 1100 00 001 12 2 8999997764321110 112223 2 3568999998885 54 33445788988
Q ss_pred Eecch
Q 008128 550 IAPAM 554 (577)
Q Consensus 550 viPD~ 554 (577)
++++.
T Consensus 233 ~~~Gl 237 (282)
T 3fbt_A 233 AVNGL 237 (282)
T ss_dssp EECSH
T ss_pred EeCcH
Confidence 77654
No 70
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=95.73 E-value=0.27 Score=49.46 Aligned_cols=132 Identities=14% Similarity=0.168 Sum_probs=83.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCc
Q 008128 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (577)
Q Consensus 396 G~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~ 475 (577)
|.|.+.+ ++..+.++++++++|.|.|-.++.++-.|.+.|++-|.|.+. +.++...|.+....
T Consensus 109 ~~Gf~~~----L~~~g~~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nR----------t~~ra~~la~~~~~--- 171 (269)
T 3tum_A 109 GAGFLGA----AHKHGFEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDP----------STARMGAVCELLGN--- 171 (269)
T ss_dssp HHHHHHH----HHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS----------CHHHHHHHHHHHHH---
T ss_pred hHHHHHH----HHHhCCCcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCC----------CHHHHHHHHHHHhc---
Confidence 5665544 445688999999999999999999999999999877888886 34454334332211
Q ss_pred ccccccccCCceEeCCCCccccccceeecCCcccc-------cchhhHhhhhccCceEEEecCCCCC-CHHHHHHHHhCC
Q 008128 476 LRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNE-------IDQSDAINLVNSGCRILVEGSNMPC-TPEAVDVLKKAN 547 (577)
Q Consensus 476 l~~y~~~~p~a~~i~~~eil~~~cDIlIPcA~~n~-------It~enA~~l~~~~akiVvEgAN~p~-T~eA~~iL~~rG 547 (577)
.++........+ ...++|++|-|+.-.. ++......+ ....+|.+-.-.|. |+ -.+.-+++|
T Consensus 172 ------~~~~~~~~~~~~-~~~~~dliiNaTp~Gm~~~~~~p~~~~~~~~l--~~~~~v~D~vY~P~~T~-ll~~A~~~G 241 (269)
T 3tum_A 172 ------GFPGLTVSTQFS-GLEDFDLVANASPVGMGTRAELPLSAALLATL--QPDTLVADVVTSPEITP-LLNRARQVG 241 (269)
T ss_dssp ------HCTTCEEESCCS-CSTTCSEEEECSSTTCSTTCCCSSCHHHHHTC--CTTSEEEECCCSSSSCH-HHHHHHHHT
T ss_pred ------cCCcceehhhhh-hhhcccccccCCccccCCCCCCCCChHHHhcc--CCCcEEEEEccCCCCCH-HHHHHHHCc
Confidence 112222111111 1246899998876332 222222333 13458899998885 54 334446788
Q ss_pred cEEecch
Q 008128 548 VLIAPAM 554 (577)
Q Consensus 548 I~viPD~ 554 (577)
..++++.
T Consensus 242 ~~~~~Gl 248 (269)
T 3tum_A 242 CRIQTGP 248 (269)
T ss_dssp CEEECHH
T ss_pred CEEECcH
Confidence 8877764
No 71
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=95.72 E-value=0.025 Score=58.79 Aligned_cols=106 Identities=11% Similarity=0.227 Sum_probs=66.1
Q ss_pred ceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCccc-ccccc-------cCC--
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLR-DYSKT-------YAR-- 485 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~-~y~~~-------~p~-- 485 (577)
.||+|.|||.+|+.+++.|.+. +..+|+|.|.. .|.+.+..+.++....|.+. ...+. +.+
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~--------~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~ 75 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVNDPF--------ITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKP 75 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSS--------SCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEE
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCC--------CCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeE
Confidence 4899999999999999999875 68999998841 13433333333323333332 11000 000
Q ss_pred ceEe---CCCCc-c-ccccceeecCCcccccchhhHhhhhccCce-EEEecC
Q 008128 486 SKYY---DEAKP-W-NERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVEGS 531 (577)
Q Consensus 486 a~~i---~~~ei-l-~~~cDIlIPcA~~n~It~enA~~l~~~~ak-iVvEgA 531 (577)
...+ +++++ | ...+|+++.|+. ...+.+.|...++.|+| +|++..
T Consensus 76 i~v~~~~dp~~l~w~~~~vDvV~eaTg-~~~~~e~a~~~l~aGak~VVIs~p 126 (337)
T 3e5r_O 76 VTVFGIRNPDEIPWAEAGAEYVVESTG-VFTDKEKAAAHLKGGAKKVVISAP 126 (337)
T ss_dssp EEEECCSCGGGCCHHHHTCSEEEECSS-SCCSHHHHTHHHHTTCSEEEESSC
T ss_pred EEEEecCChHHccccccCCCEEEECCC-chhhHHHHHHHHHcCCCEEEEecC
Confidence 0112 22333 5 358999999874 55678888888888984 777763
No 72
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=95.71 E-value=0.042 Score=55.88 Aligned_cols=115 Identities=16% Similarity=0.092 Sum_probs=72.1
Q ss_pred CCCCceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC
Q 008128 413 ELKGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (577)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~ 491 (577)
....++|.|.|.|++|...++.|.+. |.+-|.|.|. +.+++.. +.+..+. ..+..+.
T Consensus 132 ~~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr----------~~~~~~~---l~~~~~~---------~~~~~~~ 189 (312)
T 2i99_A 132 PPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNR----------TKENAEK---FADTVQG---------EVRVCSS 189 (312)
T ss_dssp CTTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECS----------SHHHHHH---HHHHSSS---------CCEECSS
T ss_pred CCCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC----------CHHHHHH---HHHHhhC---------CeEEeCC
Confidence 35678999999999999999999876 8755777775 3334322 2222111 0111111
Q ss_pred -CCccccccceeecCCcc--cccchhhHhhhhccCceEEEecCCCCCCHHHHHHHHhCCcEEecch
Q 008128 492 -AKPWNERCDVAFPCASQ--NEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAM 554 (577)
Q Consensus 492 -~eil~~~cDIlIPcA~~--n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI~viPD~ 554 (577)
++.. .+|||++-|... ..+.. ..++.++-++.-|.+.|-+.|..+.+.++|+.|+-+.
T Consensus 190 ~~e~v-~~aDiVi~atp~~~~v~~~----~~l~~g~~vi~~g~~~p~~~el~~~~~~~g~~~vD~~ 250 (312)
T 2i99_A 190 VQEAV-AGADVIITVTLATEPILFG----EWVKPGAHINAVGASRPDWRELDDELMKEAVLYVDSQ 250 (312)
T ss_dssp HHHHH-TTCSEEEECCCCSSCCBCG----GGSCTTCEEEECCCCSTTCCSBCHHHHHHSEEEESCH
T ss_pred HHHHH-hcCCEEEEEeCCCCcccCH----HHcCCCcEEEeCCCCCCCceeccHHHHhcCEEEECCH
Confidence 1122 368999887653 23332 2335577788778998876666677888898777653
No 73
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=95.71 E-value=0.019 Score=57.96 Aligned_cols=111 Identities=19% Similarity=0.282 Sum_probs=70.4
Q ss_pred ceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC-CCc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKP 494 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~-~ei 494 (577)
.||.|.|+|++|...++.|.+. +.++++|+|. +.+++ .+..+..+ .....++ +++
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~----------~~~~~---~~~~~~~~----------~~~~~~~~~~~ 58 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSR----------KLETA---ATFASRYQ----------NIQLFDQLEVF 58 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECS----------SHHHH---HHHGGGSS----------SCEEESCHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeC----------CHHHH---HHHHHHcC----------CCeEeCCHHHH
Confidence 4799999999999999988876 6889999987 23332 22222211 1122222 334
Q ss_pred cccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCH-HHHH---HHHhCCcEEec
Q 008128 495 WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTP-EAVD---VLKKANVLIAP 552 (577)
Q Consensus 495 l~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~-eA~~---iL~~rGI~viP 552 (577)
++.++|+++-|+. +..+.+.+...++.+..+++|=- +.+|. ++++ ..+++|+.+..
T Consensus 59 l~~~~D~V~i~tp-~~~h~~~~~~al~~gk~V~~EKP-~~~~~~~~~~l~~~a~~~g~~~~~ 118 (325)
T 2ho3_A 59 FKSSFDLVYIASP-NSLHFAQAKAALSAGKHVILEKP-AVSQPQEWFDLIQTAEKNNCFIFE 118 (325)
T ss_dssp HTSSCSEEEECSC-GGGHHHHHHHHHHTTCEEEEESS-CCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred hCCCCCEEEEeCC-hHHHHHHHHHHHHcCCcEEEecC-CcCCHHHHHHHHHHHHHcCCEEEE
Confidence 4457899998775 55667777777778888999842 22343 4443 33567876653
No 74
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=95.70 E-value=0.024 Score=59.27 Aligned_cols=108 Identities=18% Similarity=0.163 Sum_probs=66.8
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~ 490 (577)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++. | +.. +.+. ..+ .++++.+
T Consensus 155 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~-d-------~~~-~~~~------~~~------------~g~~~~~ 207 (352)
T 3gg9_A 155 GRVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVW-G-------REN-SKER------ARA------------DGFAVAE 207 (352)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEE-C-------SHH-HHHH------HHH------------TTCEECS
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEE-C-------CCC-CHHH------HHh------------cCceEeC
Confidence 46799999999999999999999999999997653 3 221 0000 000 1223331
Q ss_pred C-CCccccccceeecCCc-----ccccchhhHhhhhccCceEEEecCCCCC-CHHH-HHHHHhCCc
Q 008128 491 E-AKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMPC-TPEA-VDVLKKANV 548 (577)
Q Consensus 491 ~-~eil~~~cDIlIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~p~-T~eA-~~iL~~rGI 548 (577)
. +++ -..|||++-|.. .+.|+.+....+ +.++ +++.-|-+++ ..+| .+.|++.+|
T Consensus 208 ~l~el-l~~aDiV~l~~Plt~~t~~li~~~~l~~m-k~ga-ilIN~aRg~~vd~~aL~~aL~~g~i 270 (352)
T 3gg9_A 208 SKDAL-FEQSDVLSVHLRLNDETRSIITVADLTRM-KPTA-LFVNTSRAELVEENGMVTALNRGRP 270 (352)
T ss_dssp SHHHH-HHHCSEEEECCCCSTTTTTCBCHHHHTTS-CTTC-EEEECSCGGGBCTTHHHHHHHHTSS
T ss_pred CHHHH-HhhCCEEEEeccCcHHHHHhhCHHHHhhC-CCCc-EEEECCCchhhcHHHHHHHHHhCCc
Confidence 1 122 247898887653 455666665555 3344 6666676663 3333 577777765
No 75
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=95.69 E-value=0.038 Score=55.75 Aligned_cols=114 Identities=11% Similarity=0.048 Sum_probs=66.5
Q ss_pred CCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC
Q 008128 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (577)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~ 491 (577)
..+..++|.|.|+|++|..+|+.|.+.|..| .+.|. +.+++..+.+ . + +...+.
T Consensus 5 ~~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V-~~~dr----------~~~~~~~~~~---~-g-----------~~~~~~ 58 (306)
T 3l6d_A 5 DESFEFDVSVIGLGAMGTIMAQVLLKQGKRV-AIWNR----------SPGKAAALVA---A-G-----------AHLCES 58 (306)
T ss_dssp CCCCSCSEEEECCSHHHHHHHHHHHHTTCCE-EEECS----------SHHHHHHHHH---H-T-----------CEECSS
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCCEE-EEEeC----------CHHHHHHHHH---C-C-----------CeecCC
Confidence 4556789999999999999999999999985 45565 3334322221 1 1 111111
Q ss_pred CCccccccceeecCCcccccchh-----hHhhhhccCceEEEecCCCC-CC-HHHHHHHHhCCcEEecc
Q 008128 492 AKPWNERCDVAFPCASQNEIDQS-----DAINLVNSGCRILVEGSNMP-CT-PEAVDVLKKANVLIAPA 553 (577)
Q Consensus 492 ~eil~~~cDIlIPcA~~n~It~e-----nA~~l~~~~akiVvEgAN~p-~T-~eA~~iL~~rGI~viPD 553 (577)
..-.-.+||++|-|-..+....+ ....+ ..+ ++|+.-++.. .+ .+..+.++++|+.|+..
T Consensus 59 ~~e~~~~aDvVi~~vp~~~~~~~v~~~~~l~~~-~~g-~ivid~st~~~~~~~~l~~~~~~~g~~~vda 125 (306)
T 3l6d_A 59 VKAALSASPATIFVLLDNHATHEVLGMPGVARA-LAH-RTIVDYTTNAQDEGLALQGLVNQAGGHYVKG 125 (306)
T ss_dssp HHHHHHHSSEEEECCSSHHHHHHHHTSTTHHHH-TTT-CEEEECCCCCTTHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHhcCCEEEEEeCCHHHHHHHhcccchhhc-cCC-CEEEECCCCCHHHHHHHHHHHHHcCCeEEec
Confidence 00112368999988765432222 12222 224 4555555544 33 34457788999988764
No 76
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.66 E-value=0.049 Score=50.06 Aligned_cols=117 Identities=13% Similarity=0.157 Sum_probs=66.9
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEe
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i 489 (577)
..++.+.+|+|.|+|.+|..+|+.|.+. |..|+.+ |. |.+++. ..++ .+ +.-+ +.+.
T Consensus 34 ~~~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vi-d~----------~~~~~~---~~~~-~g-~~~~---~gd~--- 91 (183)
T 3c85_A 34 LINPGHAQVLILGMGRIGTGAYDELRARYGKISLGI-EI----------REEAAQ---QHRS-EG-RNVI---SGDA--- 91 (183)
T ss_dssp CBCCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEE-ES----------CHHHHH---HHHH-TT-CCEE---ECCT---
T ss_pred CcCCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEE-EC----------CHHHHH---HHHH-CC-CCEE---EcCC---
Confidence 3457788999999999999999999999 9986644 44 233332 2222 11 1100 0000
Q ss_pred CCCCcc-----ccccceeecCCcccccchhh---HhhhhccCceEEEecCCCCCCHHHHHHHHhCCcE--Eecch
Q 008128 490 DEAKPW-----NERCDVAFPCASQNEIDQSD---AINLVNSGCRILVEGSNMPCTPEAVDVLKKANVL--IAPAM 554 (577)
Q Consensus 490 ~~~eil-----~~~cDIlIPcA~~n~It~en---A~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI~--viPD~ 554 (577)
+..+.+ -.++|++|-|......+... ++.+ ....++|+-. | +++..+.|++.|+- +.|..
T Consensus 92 ~~~~~l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~-~~~~~ii~~~-~---~~~~~~~l~~~G~~~vi~p~~ 161 (183)
T 3c85_A 92 TDPDFWERILDTGHVKLVLLAMPHHQGNQTALEQLQRR-NYKGQIAAIA-E---YPDQLEGLLESGVDAAFNIYS 161 (183)
T ss_dssp TCHHHHHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHT-TCCSEEEEEE-S---SHHHHHHHHHHTCSEEEEHHH
T ss_pred CCHHHHHhccCCCCCCEEEEeCCChHHHHHHHHHHHHH-CCCCEEEEEE-C---CHHHHHHHHHcCCCEEEchHH
Confidence 011111 13689999877654433332 3332 1246777753 3 35666788888874 45654
No 77
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=95.62 E-value=0.021 Score=57.40 Aligned_cols=112 Identities=16% Similarity=0.222 Sum_probs=67.4
Q ss_pred ceEEEEecchHHHHH-HHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCcc
Q 008128 417 LRCVVSGSGKIAMHV-LEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW 495 (577)
Q Consensus 417 krVaIQGfGNVG~~a-A~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil 495 (577)
.||.|.|+|++|... ++.|.+.+..+++|+|. |.+++ .+..+..+.... | -+.++++
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~----------~~~~~---~~~~~~~g~~~~----~-----~~~~~~l 58 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMST----------SAERG---AAYATENGIGKS----V-----TSVEELV 58 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEECS----------CHHHH---HHHHHHTTCSCC----B-----SCHHHHH
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEECC----------CHHHH---HHHHHHcCCCcc----c-----CCHHHHh
Confidence 379999999999986 77777788999999997 23333 222222221000 1 1112344
Q ss_pred c-cccceeecCCcccccchhhHhhhhccCceEEEecCCCCCC-HHHHHH---HHhCCcEEec
Q 008128 496 N-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCT-PEAVDV---LKKANVLIAP 552 (577)
Q Consensus 496 ~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T-~eA~~i---L~~rGI~viP 552 (577)
. .++|+++-|.. +..+.+.+...++.+..+++|-- +.+| .++.++ .+++|+.+..
T Consensus 59 ~~~~~D~V~i~tp-~~~h~~~~~~al~~Gk~v~~ekP-~~~~~~~~~~l~~~a~~~g~~~~~ 118 (332)
T 2glx_A 59 GDPDVDAVYVSTT-NELHREQTLAAIRAGKHVLCEKP-LAMTLEDAREMVVAAREAGVVLGT 118 (332)
T ss_dssp TCTTCCEEEECSC-GGGHHHHHHHHHHTTCEEEECSS-SCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred cCCCCCEEEEeCC-hhHhHHHHHHHHHCCCeEEEeCC-CcCCHHHHHHHHHHHHHcCCEEEE
Confidence 3 46899988775 55566777777777888888731 1123 344433 3566766543
No 78
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=95.62 E-value=0.027 Score=61.64 Aligned_cols=107 Identities=12% Similarity=0.149 Sum_probs=66.6
Q ss_pred HcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceE
Q 008128 409 DMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY 488 (577)
Q Consensus 409 ~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~ 488 (577)
..+..+.|++|.|.|+|+||+.+|+.|...|++|+ +.|. + .... .+... .+.+.
T Consensus 270 ~~g~~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~-v~d~-------~---~~~~---~~a~~------------~G~~~ 323 (494)
T 3d64_A 270 ATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVW-VTEI-------D---PICA---LQAAM------------EGYRV 323 (494)
T ss_dssp HHCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EECS-------C---HHHH---HHHHT------------TTCEE
T ss_pred ccccccCCCEEEEEccCHHHHHHHHHHHHCCCEEE-EEeC-------C---hHhH---HHHHH------------cCCEe
Confidence 34778999999999999999999999999999965 4444 2 1111 01110 01222
Q ss_pred eCCCCccccccceeecC-CcccccchhhHhhhhccCceEEEecCCCCC--CHHHHHHHH
Q 008128 489 YDEAKPWNERCDVAFPC-ASQNEIDQSDAINLVNSGCRILVEGSNMPC--TPEAVDVLK 544 (577)
Q Consensus 489 i~~~eil~~~cDIlIPc-A~~n~It~enA~~l~~~~akiVvEgAN~p~--T~eA~~iL~ 544 (577)
.+-++++ ..|||++-| .+.+.|+.+....+ +.++ +|+.-|-+++ ..++.+.|+
T Consensus 324 ~~l~ell-~~aDiVi~~~~t~~lI~~~~l~~M-K~gA-ilINvgrg~veID~~aL~AL~ 379 (494)
T 3d64_A 324 VTMEYAA-DKADIFVTATGNYHVINHDHMKAM-RHNA-IVCNIGHFDSEIDVASTRQYQ 379 (494)
T ss_dssp CCHHHHT-TTCSEEEECSSSSCSBCHHHHHHC-CTTE-EEEECSSSSCSBCCGGGTTSE
T ss_pred CCHHHHH-hcCCEEEECCCcccccCHHHHhhC-CCCc-EEEEcCCCcchhchHHHHhhh
Confidence 2111222 378999988 45678888777766 3354 5565555654 444444443
No 79
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=95.59 E-value=0.026 Score=56.04 Aligned_cols=109 Identities=12% Similarity=0.085 Sum_probs=62.9
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCccc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWN 496 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil~ 496 (577)
++|.|.|.|++|..+|+.|.+.|..|+ +.|. ++ +++..+. +. +....+.-+-.-
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~-~~dr-----~~-----~~~~~~~---~~------------g~~~~~~~~~~~ 55 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVT-IWNR-----SP-----EKAEELA---AL------------GAERAATPCEVV 55 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECS-----SG-----GGGHHHH---HT------------TCEECSSHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEE-EEcC-----CH-----HHHHHHH---HC------------CCeecCCHHHHH
Confidence 689999999999999999999999854 5565 22 2332222 11 112111100112
Q ss_pred cccceeecCCcccccchhhH---hhh---hccCceEEEecCCCC-C-CHHHHHHHHhCCcEEec
Q 008128 497 ERCDVAFPCASQNEIDQSDA---INL---VNSGCRILVEGSNMP-C-TPEAVDVLKKANVLIAP 552 (577)
Q Consensus 497 ~~cDIlIPcA~~n~It~enA---~~l---~~~~akiVvEgAN~p-~-T~eA~~iL~~rGI~viP 552 (577)
.+||+++-|.....-..+.. ..+ ++.++ +|+.-.+.+ . +.+..+.+.++|+.++.
T Consensus 56 ~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~~~-~vi~~st~~~~~~~~~~~~~~~~g~~~~~ 118 (287)
T 3pef_A 56 ESCPVTFAMLADPAAAEEVCFGKHGVLEGIGEGR-GYVDMSTVDPATSQRIGVAVVAKGGRFLE 118 (287)
T ss_dssp HHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTC-EEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred hcCCEEEEEcCCHHHHHHHHcCcchHhhcCCCCC-EEEeCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 36899998877433223333 222 22344 555555543 2 33445778889998764
No 80
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=95.58 E-value=0.023 Score=59.31 Aligned_cols=102 Identities=17% Similarity=0.293 Sum_probs=65.7
Q ss_pred ceEEEEecchHHHHHHHHHHHC----CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCccccccc------ccCCc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY----GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK------TYARS 486 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~----GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~------~~p~a 486 (577)
.||+|-|||-+|+.+++.|.+. ...||+|.|. .|.+-+..|+++...+|.+.+-.+ .+ +.
T Consensus 2 ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~---------~~~~~~a~ll~ydS~hg~f~~~v~~~~~~l~v-~g 71 (335)
T 1obf_O 2 IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDL---------GDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVV-NG 71 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECS---------SCHHHHHHHHHEETTTEECSSCEEEETTEEEE-TT
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCC---------CCHHHHHHHhccCCcCCCCCCCEEEeCCEEEE-CC
Confidence 4799999999999999999887 4789999984 255555445544333333221100 01 11
Q ss_pred eE---e---CCCC-cc-ccccceeecCCcccccchhhHhhhhccCce-EEEe
Q 008128 487 KY---Y---DEAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVE 529 (577)
Q Consensus 487 ~~---i---~~~e-il-~~~cDIlIPcA~~n~It~enA~~l~~~~ak-iVvE 529 (577)
+. . ++.+ .| +..+||++.|+ +..++.+.|+..++.||| +|+-
T Consensus 72 ~~i~v~~~~dp~~~~w~~~gvDiV~est-G~f~s~e~a~~h~~aGakkVviS 122 (335)
T 1obf_O 72 DKIRVDANRNPAQLPWGALKVDVVLECT-GFFTTKEKAGAHIKGGAKKVIIS 122 (335)
T ss_dssp EEEEEECCSCGGGSCTTTTTCSEEEECS-SSCCSHHHHHHHHHHTCSEEEES
T ss_pred EEEEEEEcCCcccCCccccCCCEEEEcc-CccccHHHHHHHHHcCCCEEEEC
Confidence 11 1 1112 36 36899999987 466788888888888997 5553
No 81
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.56 E-value=0.087 Score=45.27 Aligned_cols=32 Identities=22% Similarity=0.415 Sum_probs=27.0
Q ss_pred CceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
+++|+|.|+|.+|+.+++.|.+.|..|+ +.|.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~-~~d~ 35 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIV-LIDI 35 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEE-EEEC
Confidence 5789999999999999999999999865 4454
No 82
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=95.53 E-value=0.014 Score=59.44 Aligned_cols=113 Identities=22% Similarity=0.270 Sum_probs=71.0
Q ss_pred ceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEe-CCCCc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAKP 494 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i-~~~ei 494 (577)
.||.|.|+|++|...++.|.+. +..+++|+|. |.+++ .+..+..+. .... +.+++
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~----------~~~~~---~~~~~~~~~----------~~~~~~~~~l 59 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDV----------REDRL---REMKEKLGV----------EKAYKDPHEL 59 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECS----------CHHHH---HHHHHHHTC----------SEEESSHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECC----------CHHHH---HHHHHHhCC----------CceeCCHHHH
Confidence 5899999999999999888774 7899999997 33333 222221111 1112 22344
Q ss_pred cc-cccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHH---HHHHhCCcEEecc
Q 008128 495 WN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV---DVLKKANVLIAPA 553 (577)
Q Consensus 495 l~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~---~iL~~rGI~viPD 553 (577)
+. .++|+++-|. .+..+.+.+...++.+..+++|=-=.....++. +..+++|+.+...
T Consensus 60 l~~~~~D~V~i~t-p~~~h~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~ 121 (344)
T 3ezy_A 60 IEDPNVDAVLVCS-STNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFTG 121 (344)
T ss_dssp HHCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred hcCCCCCEEEEcC-CCcchHHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEe
Confidence 43 4799999776 456677777777788888999851111123443 3345667766544
No 83
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=95.53 E-value=0.032 Score=55.48 Aligned_cols=102 Identities=16% Similarity=0.116 Sum_probs=68.2
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC-CCCcc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAKPW 495 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~-~~eil 495 (577)
.||+|.|+|++|+.+++.+.+.+..++++.|.++.- +.| ....+ -++++
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~--~~g----------------------------v~v~~dl~~l~ 53 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA--TTP----------------------------YQQYQHIADVK 53 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC----CC----------------------------SCBCSCTTTCT
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc--cCC----------------------------CceeCCHHHHh
Confidence 589999999999999999998766999999974320 001 11111 13343
Q ss_pred ccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHHH----hCCcEEecchh
Q 008128 496 NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLK----KANVLIAPAMA 555 (577)
Q Consensus 496 ~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~----~rGI~viPD~~ 555 (577)
++|++|-++..+... +++. ++.+..+|++-. ..|++..+.|+ +.+|++.|.+.
T Consensus 54 --~~DVvIDft~p~a~~-~~~~--l~~g~~vVigTT--G~s~e~~~~l~~aa~~~~v~~a~N~S 110 (243)
T 3qy9_A 54 --GADVAIDFSNPNLLF-PLLD--EDFHLPLVVATT--GEKEKLLNKLDELSQNMPVFFSANMS 110 (243)
T ss_dssp --TCSEEEECSCHHHHH-HHHT--SCCCCCEEECCC--SSHHHHHHHHHHHTTTSEEEECSSCC
T ss_pred --CCCEEEEeCChHHHH-HHHH--HhcCCceEeCCC--CCCHHHHHHHHHHHhcCCEEEECCcc
Confidence 899999988776654 4554 577888988533 45665444443 44677777664
No 84
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=95.53 E-value=0.064 Score=54.70 Aligned_cols=35 Identities=29% Similarity=0.294 Sum_probs=31.4
Q ss_pred CCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
++.|+||.|.|+|++|+.+|+.|...|.+|++ .|.
T Consensus 121 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~-~dr 155 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEIGTRVGKILAALGAQVRG-FSR 155 (303)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHTTCEEEE-ECS
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHHCCCEEEE-ECC
Confidence 68999999999999999999999999999654 454
No 85
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=95.52 E-value=0.06 Score=58.81 Aligned_cols=92 Identities=12% Similarity=0.142 Sum_probs=58.0
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~ 490 (577)
+..+.|++|.|.|+|.||..+|+.|...|++|+ +.|. +..++ ...++ . +++.++
T Consensus 269 ~~~l~GktV~IiG~G~IG~~~A~~lka~Ga~Vi-v~d~----------~~~~~---~~A~~-~-----------Ga~~~~ 322 (494)
T 3ce6_A 269 DALIGGKKVLICGYGDVGKGCAEAMKGQGARVS-VTEI----------DPINA---LQAMM-E-----------GFDVVT 322 (494)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECS----------CHHHH---HHHHH-T-----------TCEECC
T ss_pred CCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEE-EEeC----------CHHHH---HHHHH-c-----------CCEEec
Confidence 457899999999999999999999999999865 4554 22232 11111 1 112221
Q ss_pred CCCccccccceeecCCc-ccccchhhHhhhhccCceEEEec
Q 008128 491 EAKPWNERCDVAFPCAS-QNEIDQSDAINLVNSGCRILVEG 530 (577)
Q Consensus 491 ~~eil~~~cDIlIPcA~-~n~It~enA~~l~~~~akiVvEg 530 (577)
.++++ ..+||++-|.. .+.|+.+....+ +.++.+|-=|
T Consensus 323 l~e~l-~~aDvVi~atgt~~~i~~~~l~~m-k~ggilvnvG 361 (494)
T 3ce6_A 323 VEEAI-GDADIVVTATGNKDIIMLEHIKAM-KDHAILGNIG 361 (494)
T ss_dssp HHHHG-GGCSEEEECSSSSCSBCHHHHHHS-CTTCEEEECS
T ss_pred HHHHH-hCCCEEEECCCCHHHHHHHHHHhc-CCCcEEEEeC
Confidence 12222 47999999865 355665555554 5567665443
No 86
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=95.51 E-value=0.026 Score=58.65 Aligned_cols=83 Identities=8% Similarity=0.070 Sum_probs=60.0
Q ss_pred ceEEEEecchHHHHHHHHHHHC---------CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCce
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY---------GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSK 487 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~---------GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~ 487 (577)
.+|.|.|+|+||+..++.|.+. +.++++|+|++ ...+.+++. ..
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~--~~~~~~~~~-------------------------~~ 56 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRD--PRKPRAIPQ-------------------------EL 56 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSC--TTSCCSSCG-------------------------GG
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECC--HHHhhccCc-------------------------cc
Confidence 5899999999999999998875 57899999985 112223221 01
Q ss_pred Ee-CCCCccccccceeecCCcccccchhhHhhhhccCceEEE
Q 008128 488 YY-DEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILV 528 (577)
Q Consensus 488 ~i-~~~eil~~~cDIlIPcA~~n~It~enA~~l~~~~akiVv 528 (577)
+. +.++++ ++||++-|+.......+.+.+.+++|..+|+
T Consensus 57 ~~~d~~~ll--~iDvVve~t~~~~~a~~~~~~AL~aGKhVVt 96 (332)
T 2ejw_A 57 LRAEPFDLL--EADLVVEAMGGVEAPLRLVLPALEAGIPLIT 96 (332)
T ss_dssp EESSCCCCT--TCSEEEECCCCSHHHHHHHHHHHHTTCCEEE
T ss_pred ccCCHHHHh--CCCEEEECCCCcHHHHHHHHHHHHcCCeEEE
Confidence 11 234556 8999999987655556677777788999999
No 87
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=95.50 E-value=0.042 Score=60.12 Aligned_cols=108 Identities=20% Similarity=0.219 Sum_probs=65.2
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~ 490 (577)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++ .|. .. +.+.. .+ . ++...+
T Consensus 137 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~G~~V~~-~d~-------~~-~~~~a---~~----~-----------g~~~~~ 189 (529)
T 1ygy_A 137 GTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVA-YDP-------YV-SPARA---AQ----L-----------GIELLS 189 (529)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEE-ECT-------TS-CHHHH---HH----H-----------TCEECC
T ss_pred ccccCCCEEEEEeeCHHHHHHHHHHHhCCCEEEE-ECC-------CC-ChhHH---Hh----c-----------CcEEcC
Confidence 4579999999999999999999999999999754 343 32 22111 11 1 122221
Q ss_pred CCCccccccceeecCCc-----ccccchhhHhhhhccCceEEEecCCCCC-CHHH-HHHHHhCCc
Q 008128 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMPC-TPEA-VDVLKKANV 548 (577)
Q Consensus 491 ~~eil~~~cDIlIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~p~-T~eA-~~iL~~rGI 548 (577)
.+++ -..||+++-|.. .+.|+.+....+ +.++ +|+.-|-+.+ +.++ .+.|.+.+|
T Consensus 190 l~e~-~~~aDvV~l~~P~~~~t~~~i~~~~~~~~-k~g~-ilin~arg~iv~~~aL~~al~~g~i 251 (529)
T 1ygy_A 190 LDDL-LARADFISVHLPKTPETAGLIDKEALAKT-KPGV-IIVNAARGGLVDEAALADAITGGHV 251 (529)
T ss_dssp HHHH-HHHCSEEEECCCCSTTTTTCBCHHHHTTS-CTTE-EEEECSCTTSBCHHHHHHHHHTSSE
T ss_pred HHHH-HhcCCEEEECCCCchHHHHHhCHHHHhCC-CCCC-EEEECCCCchhhHHHHHHHHHcCCc
Confidence 1112 237899988854 456666555554 3344 5555556654 4433 366766544
No 88
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=95.50 E-value=0.091 Score=57.38 Aligned_cols=97 Identities=13% Similarity=0.146 Sum_probs=60.3
Q ss_pred HHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCce
Q 008128 408 ADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSK 487 (577)
Q Consensus 408 ~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~ 487 (577)
+..+.++.|++|+|.|+|.+|..+|+.|...|++|+ ++|. |..++ .+.... + ..
T Consensus 257 r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~GA~Vi-v~D~----------~~~~a---~~Aa~~-g-----------~d 310 (488)
T 3ond_A 257 RATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVI-VTEI----------DPICA---LQATME-G-----------LQ 310 (488)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECS----------CHHHH---HHHHHT-T-----------CE
T ss_pred HHcCCcccCCEEEEECCCHHHHHHHHHHHHCCCEEE-EEcC----------CHHHH---HHHHHh-C-----------Cc
Confidence 445778999999999999999999999999999854 5665 22222 111111 1 11
Q ss_pred EeCCCCccccccceeecCCc-ccccchhhHhhhhccCceEEEecCCC
Q 008128 488 YYDEAKPWNERCDVAFPCAS-QNEIDQSDAINLVNSGCRILVEGSNM 533 (577)
Q Consensus 488 ~i~~~eil~~~cDIlIPcA~-~n~It~enA~~l~~~~akiVvEgAN~ 533 (577)
..+.++ ....+|+++-|.. .+.|+.+....+ +.++ +|+-.++.
T Consensus 311 v~~lee-~~~~aDvVi~atG~~~vl~~e~l~~m-k~ga-iVvNaG~~ 354 (488)
T 3ond_A 311 VLTLED-VVSEADIFVTTTGNKDIIMLDHMKKM-KNNA-IVCNIGHF 354 (488)
T ss_dssp ECCGGG-TTTTCSEEEECSSCSCSBCHHHHTTS-CTTE-EEEESSST
T ss_pred cCCHHH-HHHhcCEEEeCCCChhhhhHHHHHhc-CCCe-EEEEcCCC
Confidence 111112 2236899887764 467777665555 4455 44444443
No 89
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=95.49 E-value=0.018 Score=60.18 Aligned_cols=119 Identities=13% Similarity=0.090 Sum_probs=73.3
Q ss_pred ceEEEEecchHHHHHHHHHHHC----CCeEEEEEcCCCeeeCCC--CCCH-HhHhHHHHHHhhc-CcccccccccCCceE
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY----GAIPVSVSDAKGYLVDED--GFDY-MKISFLRDIKSQQ-RSLRDYSKTYARSKY 488 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~----GAkVVaISDs~G~Iydp~--GLD~-e~L~~l~~~k~~~-g~l~~y~~~~p~a~~ 488 (577)
.+|.|.|+|+||+..++.|.+. +.++++|+|++...++++ |++. ..+..++ +.. +..
T Consensus 5 i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~~~~~~~~~gi~~~~~~~e~l---~~~~~~~------------ 69 (358)
T 1ebf_A 5 VNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAAL---AASTTKT------------ 69 (358)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHH---HTCCCBC------------
T ss_pred EEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECChhhhccccCCCCccccHHHHH---hcccCCC------------
Confidence 5899999999999999999886 369999999988777777 8864 2221111 111 100
Q ss_pred eCCCCccc-----cccceeecCCcccccchhhHhhhhccCceEEE--ecCCCCCCHHHHHHH--HhCCcEEe
Q 008128 489 YDEAKPWN-----ERCDVAFPCASQNEIDQSDAINLVNSGCRILV--EGSNMPCTPEAVDVL--KKANVLIA 551 (577)
Q Consensus 489 i~~~eil~-----~~cDIlIPcA~~n~It~enA~~l~~~~akiVv--EgAN~p~T~eA~~iL--~~rGI~vi 551 (577)
.+.+.+++ ...||++-|+.... ..+.+.+.+++|..+|+ |.+......++.++. +++|+.+.
T Consensus 70 ~did~v~e~~~~~~~~DvVV~~t~~~~-~a~~~~~AL~aGkhVVtaNkkpla~~~~~~~eL~~A~~~gv~~~ 140 (358)
T 1ebf_A 70 LPLDDLIAHLKTSPKPVILVDNTSSAY-IAGFYTKFVENGISIATPNKKAFSSDLATWKALFSNKPTNGFVY 140 (358)
T ss_dssp CCHHHHHHHHTTCSSCEEEEECSCCHH-HHTTHHHHHHTTCEEECCCCGGGSSCHHHHHHHTCCCTTCCCEE
T ss_pred CCHHHHHHHhhhccCCcEEEEcCCChH-HHHHHHHHHHCCCeEEecCcccccCCHHHHHHHHHHHHcCCEEE
Confidence 00011111 12399999987543 33444456678999998 554433325565544 34576654
No 90
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=95.49 E-value=0.056 Score=54.60 Aligned_cols=112 Identities=14% Similarity=0.088 Sum_probs=71.0
Q ss_pred ceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCcc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW 495 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil 495 (577)
.||.|.|+|++|...++.|.+. +.++++|+|. |.+++ .+..+..+ ..+-+.++++
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~----------~~~~~---~~~~~~~~-----------~~~~~~~~~l 59 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADA----------FPAAA---EAIAGAYG-----------CEVRTIDAIE 59 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS----------SHHHH---HHHHHHTT-----------CEECCHHHHH
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECC----------CHHHH---HHHHHHhC-----------CCcCCHHHHh
Confidence 5899999999999999988885 8899999997 23333 22222211 1111223444
Q ss_pred -ccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHH---HHHHhCCcEEecc
Q 008128 496 -NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV---DVLKKANVLIAPA 553 (577)
Q Consensus 496 -~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~---~iL~~rGI~viPD 553 (577)
+.++|+++-|. .+..+.+.+...++.+..+++|--=.....+++ +..+++|+.+...
T Consensus 60 ~~~~~D~V~i~t-p~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~ 120 (331)
T 4hkt_A 60 AAADIDAVVICT-PTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVG 120 (331)
T ss_dssp HCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred cCCCCCEEEEeC-CchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEc
Confidence 34789988766 556677777777788888999852111223443 3346677766543
No 91
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=95.48 E-value=0.049 Score=57.27 Aligned_cols=108 Identities=11% Similarity=0.089 Sum_probs=64.2
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~ 490 (577)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++ ||+.. +.+.. .+ . ++++.+
T Consensus 171 ~~~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~~--------~d~~~-~~~~~------~~-~-----------g~~~~~ 223 (365)
T 4hy3_A 171 ARLIAGSEIGIVGFGDLGKALRRVLSGFRARIRV--------FDPWL-PRSML------EE-N-----------GVEPAS 223 (365)
T ss_dssp CCCSSSSEEEEECCSHHHHHHHHHHTTSCCEEEE--------ECSSS-CHHHH------HH-T-----------TCEECC
T ss_pred ccccCCCEEEEecCCcccHHHHHhhhhCCCEEEE--------ECCCC-CHHHH------hh-c-----------CeeeCC
Confidence 5689999999999999999999999999999764 33332 22111 00 0 122211
Q ss_pred CCCccccccceeecCCc-----ccccchhhHhhhhccCceEEEecCCCC-CCHHH-HHHHHhCCc
Q 008128 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANV 548 (577)
Q Consensus 491 ~~eil~~~cDIlIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~p-~T~eA-~~iL~~rGI 548 (577)
-+++ -..|||++-|.. .+.|+.+....+ +.++ +++.-|=++ +..+| .+.|++..|
T Consensus 224 l~el-l~~aDvV~l~~Plt~~T~~li~~~~l~~m-k~ga-ilIN~aRG~~vde~aL~~aL~~g~i 285 (365)
T 4hy3_A 224 LEDV-LTKSDFIFVVAAVTSENKRFLGAEAFSSM-RRGA-AFILLSRADVVDFDALMAAVSSGHI 285 (365)
T ss_dssp HHHH-HHSCSEEEECSCSSCC---CCCHHHHHTS-CTTC-EEEECSCGGGSCHHHHHHHHHTTSS
T ss_pred HHHH-HhcCCEEEEcCcCCHHHHhhcCHHHHhcC-CCCc-EEEECcCCchhCHHHHHHHHHcCCc
Confidence 1122 236888876544 446666665555 3355 555555555 44444 466665554
No 92
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=95.46 E-value=0.039 Score=54.91 Aligned_cols=116 Identities=15% Similarity=0.178 Sum_probs=66.8
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCccc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWN 496 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil~ 496 (577)
++|.|.|.|++|..+|+.|.+.|..| .+.|. +.+++..+ .+. + ....+...-.-
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V-~~~d~----------~~~~~~~~---~~~-g-----------~~~~~~~~~~~ 57 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLL-NVFDL----------VQSAVDGL---VAA-G-----------ASAARSARDAV 57 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEE-EEECS----------SHHHHHHH---HHT-T-----------CEECSSHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeE-EEEcC----------CHHHHHHH---HHC-C-----------CeEcCCHHHHH
Confidence 58999999999999999999999985 45565 23343222 211 1 11111101112
Q ss_pred cccceeecCCcccccchhhHh---hhh---ccCceEEEecCCCC-CC-HHHHHHHHhCCcEEecchhccccce
Q 008128 497 ERCDVAFPCASQNEIDQSDAI---NLV---NSGCRILVEGSNMP-CT-PEAVDVLKKANVLIAPAMAAGAGGV 561 (577)
Q Consensus 497 ~~cDIlIPcA~~n~It~enA~---~l~---~~~akiVvEgAN~p-~T-~eA~~iL~~rGI~viPD~~aNAGGV 561 (577)
.+||++|-|-.......+... .+. +.+ ++|+.-++.. .+ .+..+.+.++|+.++.- -+.||.
T Consensus 58 ~~aDvvi~~vp~~~~~~~v~~~~~~~~~~l~~~-~~vi~~st~~~~~~~~l~~~~~~~g~~~~~~--pv~~~~ 127 (302)
T 2h78_A 58 QGADVVISMLPASQHVEGLYLDDDGLLAHIAPG-TLVLECSTIAPTSARKIHAAARERGLAMLDA--PVSGGT 127 (302)
T ss_dssp TTCSEEEECCSCHHHHHHHHHSSSCGGGSSCSS-CEEEECSCCCHHHHHHHHHHHHHTTCCEEEC--CEESCH
T ss_pred hCCCeEEEECCCHHHHHHHHcCchhHHhcCCCC-cEEEECCCCCHHHHHHHHHHHHHcCCEEEEE--EccCCh
Confidence 368999998864433233222 222 223 3555555544 33 34567788889887752 455554
No 93
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=95.46 E-value=0.038 Score=56.06 Aligned_cols=112 Identities=9% Similarity=0.157 Sum_probs=65.4
Q ss_pred CCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCC
Q 008128 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAK 493 (577)
Q Consensus 414 l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~e 493 (577)
.+.++|.|.|.|++|..+|+.|.+.|..| .+.|. +.+++. ++.+. ++...+..+
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G~~V-~~~dr----------~~~~~~---~l~~~------------g~~~~~~~~ 82 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAGYAL-QVWNR----------TPARAA---SLAAL------------GATIHEQAR 82 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTTCEE-EEECS----------CHHHHH---HHHTT------------TCEEESSHH
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCCCeE-EEEcC----------CHHHHH---HHHHC------------CCEeeCCHH
Confidence 45689999999999999999999999985 45565 333432 22211 122221111
Q ss_pred ccccccceeecCCcccccchhhHh--hh---hccCceEEEecCCCC-C-CHHHHHHHHhCCcEEec
Q 008128 494 PWNERCDVAFPCASQNEIDQSDAI--NL---VNSGCRILVEGSNMP-C-TPEAVDVLKKANVLIAP 552 (577)
Q Consensus 494 il~~~cDIlIPcA~~n~It~enA~--~l---~~~~akiVvEgAN~p-~-T~eA~~iL~~rGI~viP 552 (577)
-.-.+|||+|-|........+... .+ +..+ ++|+.-++.+ . +.+..+.+.++|+.++.
T Consensus 83 e~~~~aDvVi~~vp~~~~~~~v~~~~~~~~~l~~~-~~vi~~st~~~~~~~~~~~~~~~~g~~~~~ 147 (320)
T 4dll_A 83 AAARDADIVVSMLENGAVVQDVLFAQGVAAAMKPG-SLFLDMASITPREARDHAARLGALGIAHLD 147 (320)
T ss_dssp HHHTTCSEEEECCSSHHHHHHHHTTTCHHHHCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHhcCCEEEEECCCHHHHHHHHcchhHHhhCCCC-CEEEecCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 112378999988775432222221 22 1234 4555555543 2 34455778889998764
No 94
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.45 E-value=0.058 Score=47.34 Aligned_cols=113 Identities=19% Similarity=0.217 Sum_probs=65.0
Q ss_pred CCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCc
Q 008128 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKP 494 (577)
Q Consensus 415 ~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~ei 494 (577)
+.++|+|.|+|.+|+.+|+.|.+.|..|+.+ |. |.+.+ ...++. + +.-+ +.+ .+..+.
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~i-d~----------~~~~~---~~~~~~-~-~~~~---~gd---~~~~~~ 62 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAV-DK----------SKEKI---ELLEDE-G-FDAV---IAD---PTDESF 62 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEE-ES----------CHHHH---HHHHHT-T-CEEE---ECC---TTCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEE-EC----------CHHHH---HHHHHC-C-CcEE---ECC---CCCHHH
Confidence 4578999999999999999999999997654 54 23333 222221 1 1100 000 011112
Q ss_pred c----ccccceeecCCcccccc---hhhHhhhhccCceEEEecCCCCCCHHHHHHHHhCCc--EEecchh
Q 008128 495 W----NERCDVAFPCASQNEID---QSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANV--LIAPAMA 555 (577)
Q Consensus 495 l----~~~cDIlIPcA~~n~It---~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI--~viPD~~ 555 (577)
| -.+||++|-|......+ ...++.+ ...++|+-.. +++-.+.|++.|+ .+.|...
T Consensus 63 l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~--~~~~iia~~~----~~~~~~~l~~~G~~~vi~p~~~ 126 (141)
T 3llv_A 63 YRSLDLEGVSAVLITGSDDEFNLKILKALRSV--SDVYAIVRVS----SPKKKEEFEEAGANLVVLVADA 126 (141)
T ss_dssp HHHSCCTTCSEEEECCSCHHHHHHHHHHHHHH--CCCCEEEEES----CGGGHHHHHHTTCSEEEEHHHH
T ss_pred HHhCCcccCCEEEEecCCHHHHHHHHHHHHHh--CCceEEEEEc----ChhHHHHHHHcCCCEEECHHHH
Confidence 2 13789999887643333 3444444 1456776543 3355577889987 4566543
No 95
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.44 E-value=0.046 Score=55.13 Aligned_cols=112 Identities=11% Similarity=0.059 Sum_probs=64.7
Q ss_pred CCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCC
Q 008128 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAK 493 (577)
Q Consensus 414 l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~e 493 (577)
.+-++|.|.|+|++|..+|+.|.+.|..| .+.|. + .+++..+. + . ++...+...
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V-~~~dr-----~-----~~~~~~l~---~-~-----------g~~~~~~~~ 72 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKV-TVWNR-----T-----LSKCDELV---E-H-----------GASVCESPA 72 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEE-EEECS-----S-----GGGGHHHH---H-T-----------TCEECSSHH
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeE-EEEeC-----C-----HHHHHHHH---H-C-----------CCeEcCCHH
Confidence 34479999999999999999999999985 45565 2 22332222 1 1 122211100
Q ss_pred ccccccceeecCCcccccchhhH---hhhh---ccCceEEEecCCCC-C-CHHHHHHHHhCCcEEec
Q 008128 494 PWNERCDVAFPCASQNEIDQSDA---INLV---NSGCRILVEGSNMP-C-TPEAVDVLKKANVLIAP 552 (577)
Q Consensus 494 il~~~cDIlIPcA~~n~It~enA---~~l~---~~~akiVvEgAN~p-~-T~eA~~iL~~rGI~viP 552 (577)
-.-.+||++|-|........+.. ..+. ..+ ++|+.-++.+ . +.+..+.+.++|+.++.
T Consensus 73 ~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g-~~vv~~st~~~~~~~~~~~~~~~~g~~~v~ 138 (310)
T 3doj_A 73 EVIKKCKYTIAMLSDPCAALSVVFDKGGVLEQICEG-KGYIDMSTVDAETSLKINEAITGKGGRFVE 138 (310)
T ss_dssp HHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhCCEEEEEcCCHHHHHHHHhCchhhhhccCCC-CEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 11236899998876543222322 2222 223 4556555543 2 34445778889998764
No 96
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=95.44 E-value=0.082 Score=58.52 Aligned_cols=178 Identities=13% Similarity=0.121 Sum_probs=123.8
Q ss_pred CCHHHHHHHHHHHHHHHhhhcCCCcccCCCCCcCChhHHHHHHHHhhhhhCCccccccCccccccCCCCCCCcchHHHHH
Q 008128 322 KSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVF 401 (577)
Q Consensus 322 ~s~~Eler~~r~f~~eL~~~IGp~~DVpapDvGt~~~em~~i~~~y~~~~g~~~g~vTGKp~~~GGs~~r~eATG~GV~~ 401 (577)
.+.+|...|...||..+.+..||..-|==.|++. ..--.|.+.|+.-. -|+.. --.-||-=+..
T Consensus 206 v~g~eYd~fvdefv~av~~~fG~~~~I~~EDf~~--~~af~il~ryr~~i----pvFnD----------DiqGTa~V~lA 269 (564)
T 1pj3_A 206 DRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGN--HNAFRFLRKYREKY----CTFND----------DIQGTAAVALA 269 (564)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCH--HHHHHHHHHHTTTS----SEEEH----------HHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHHHHcCCCcEEeehhcCC--ccHHHHHHHhccCC----CEeCC----------CCchHHHHHHH
Confidence 4567888999999999998888877777778764 34445667776521 11211 11235655666
Q ss_pred HHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHH----CCC------eEEEEEcCCCeeeCCC--CCCHHhHhHHHHH
Q 008128 402 FAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIA----YGA------IPVSVSDAKGYLVDED--GFDYMKISFLRDI 469 (577)
Q Consensus 402 ~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e----~GA------kVVaISDs~G~Iydp~--GLD~e~L~~l~~~ 469 (577)
++-.+++-.|.+|+..||++.|.|.-|..+|+.|.. .|. +=+-+.|++|.|++.. +++..+.
T Consensus 270 gllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~~D~~Gli~~~r~~~l~~~k~------ 343 (564)
T 1pj3_A 270 GLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQE------ 343 (564)
T ss_dssp HHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTEECBTTCSSCCCTTTG------
T ss_pred HHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHHcCCChHHhhCcEEEEeCCCeEECCCcccchHHHH------
Confidence 778888888999999999999999999999999986 784 4478999999999853 4554331
Q ss_pred HhhcCcccccccccCCceEeCCCCcc----ccccceeecCCc-ccccchhhHhhhhc-cCceEEEecCC
Q 008128 470 KSQQRSLRDYSKTYARSKYYDEAKPW----NERCDVAFPCAS-QNEIDQSDAINLVN-SGCRILVEGSN 532 (577)
Q Consensus 470 k~~~g~l~~y~~~~p~a~~i~~~eil----~~~cDIlIPcA~-~n~It~enA~~l~~-~~akiVvEgAN 532 (577)
.|+..... ....++. .+++||||=++. .+.+|++-++.+.+ +.=.||---||
T Consensus 344 --------~~A~~~~~---~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN 401 (564)
T 1pj3_A 344 --------PFTHSAPE---SIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSN 401 (564)
T ss_dssp --------GGCBCCCS---SCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCS
T ss_pred --------HHHHhcCc---cccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCC
Confidence 11111000 0001232 347999999997 69999999999853 23467777788
No 97
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.44 E-value=0.17 Score=51.96 Aligned_cols=137 Identities=15% Similarity=0.123 Sum_probs=80.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCc
Q 008128 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (577)
Q Consensus 396 G~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~ 475 (577)
|+|.+.+++ ..+.+++|++++|.|.|-+|+.++..|.+.|++-|.|.+.+ ++ ..+++..+.+.......
T Consensus 132 ~~Gf~~~L~----~~~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt-----~~--~~~~a~~la~~~~~~~~ 200 (312)
T 3t4e_A 132 GTGHIRAIK----ESGFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK-----DD--FFEKAVAFAKRVNENTD 200 (312)
T ss_dssp HHHHHHHHH----HTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS-----ST--HHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHH----hcCCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC-----Cc--hHHHHHHHHHHhhhccC
Confidence 667666654 44788999999999999999999999999999657788762 11 03333222221111100
Q ss_pred ccccccccCCceEeCCCCc---c--ccccceeecCCcccc--cchh----hHhhhhccCceEEEecCCCCC-CHHHHHHH
Q 008128 476 LRDYSKTYARSKYYDEAKP---W--NERCDVAFPCASQNE--IDQS----DAINLVNSGCRILVEGSNMPC-TPEAVDVL 543 (577)
Q Consensus 476 l~~y~~~~p~a~~i~~~ei---l--~~~cDIlIPcA~~n~--It~e----nA~~l~~~~akiVvEgAN~p~-T~eA~~iL 543 (577)
. ....++-.++ - -.++||+|-|+.-.. .+.. +...| ....+|.+-.-.|. |+ -.+.-
T Consensus 201 ~--------~v~~~~~~~l~~~~~~l~~~DiIINaTp~Gm~~~~~~~~~~~~~~l--~~~~~v~D~vY~P~~T~-ll~~A 269 (312)
T 3t4e_A 201 C--------VVTVTDLADQHAFTEALASADILTNGTKVGMKPLENESLIGDVSLL--RPELLVTECVYNPHMTK-LLQQA 269 (312)
T ss_dssp C--------EEEEEETTCHHHHHHHHHHCSEEEECSSTTSTTSTTCCSCCCGGGS--CTTCEEEECCCSSSSCH-HHHHH
T ss_pred c--------ceEEechHhhhhhHhhccCceEEEECCcCCCCCCCCCcccCCHHHc--CCCCEEEEeccCCCCCH-HHHHH
Confidence 0 0112222221 1 137899997765432 1111 11233 24578999999995 54 33444
Q ss_pred HhCCcEEecch
Q 008128 544 KKANVLIAPAM 554 (577)
Q Consensus 544 ~~rGI~viPD~ 554 (577)
+++|+.++.+.
T Consensus 270 ~~~G~~~~~Gl 280 (312)
T 3t4e_A 270 QQAGCKTIDGY 280 (312)
T ss_dssp HHTTCEEECHH
T ss_pred HHCCCeEECcH
Confidence 67888776654
No 98
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=95.43 E-value=0.03 Score=56.38 Aligned_cols=119 Identities=10% Similarity=0.134 Sum_probs=75.4
Q ss_pred CCceEEEEec-chHHHHHHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC-C
Q 008128 415 KGLRCVVSGS-GKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-E 491 (577)
Q Consensus 415 ~GkrVaIQGf-GNVG~~aA~~L~e-~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~-~ 491 (577)
+..||+|.|+ |.+|+.+++.+.+ .|..++++.|.+..-. .|-|..++ . .+..+ +....+ -
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~--~g~d~~~~---------~-g~~~~-----~v~~~~dl 66 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSL--LGSDAGEL---------A-GAGKT-----GVTVQSSL 66 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTT--CSCCTTCS---------S-SSSCC-----SCCEESCS
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhh--hhhhHHHH---------c-CCCcC-----CceecCCH
Confidence 3469999998 9999999998764 6889999999743100 13333221 0 01100 111122 2
Q ss_pred CCccccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHHHh----CCcEEecch
Q 008128 492 AKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKK----ANVLIAPAM 554 (577)
Q Consensus 492 ~eil~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~----rGI~viPD~ 554 (577)
++++. ++|++|-++... -..+++...++++..+|+|-. ..|++..+.|.+ .++++.|.+
T Consensus 67 ~~~l~-~~DvVIDft~p~-~~~~~~~~a~~~G~~vVigTt--G~~~e~~~~L~~~a~~~~vv~a~N~ 129 (273)
T 1dih_A 67 DAVKD-DFDVFIDFTRPE-GTLNHLAFCRQHGKGMVIGTT--GFDEAGKQAIRDAAADIAIVFAANF 129 (273)
T ss_dssp TTTTT-SCSEEEECSCHH-HHHHHHHHHHHTTCEEEECCC--CCCHHHHHHHHHHTTTSCEEECSCC
T ss_pred HHHhc-CCCEEEEcCChH-HHHHHHHHHHhCCCCEEEECC--CCCHHHHHHHHHhcCCCCEEEEecC
Confidence 34444 799999888654 347788888888999999876 366655555543 477777754
No 99
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=95.42 E-value=0.051 Score=59.21 Aligned_cols=97 Identities=10% Similarity=0.148 Sum_probs=61.8
Q ss_pred cCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEe
Q 008128 410 MNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (577)
Q Consensus 410 ~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i 489 (577)
.+..+.|++|.|.|+|+||+.+|+.|...|++|+ +.|. + .... .+... . +.+..
T Consensus 251 ~~~~l~GktVgIIG~G~IG~~vA~~l~~~G~~Vi-v~d~-------~---~~~~---~~a~~-~-----------g~~~~ 304 (479)
T 1v8b_A 251 TDFLISGKIVVICGYGDVGKGCASSMKGLGARVY-ITEI-------D---PICA---IQAVM-E-----------GFNVV 304 (479)
T ss_dssp HCCCCTTSEEEEECCSHHHHHHHHHHHHHTCEEE-EECS-------C---HHHH---HHHHT-T-----------TCEEC
T ss_pred cccccCCCEEEEEeeCHHHHHHHHHHHhCcCEEE-EEeC-------C---hhhH---HHHHH-c-----------CCEec
Confidence 4678999999999999999999999999999965 4443 2 2111 01110 0 11221
Q ss_pred CCCCccccccceeecC-CcccccchhhHhhhhccCceEEEecCCCCC
Q 008128 490 DEAKPWNERCDVAFPC-ASQNEIDQSDAINLVNSGCRILVEGSNMPC 535 (577)
Q Consensus 490 ~~~eil~~~cDIlIPc-A~~n~It~enA~~l~~~~akiVvEgAN~p~ 535 (577)
+-+++ -..|||++-| .+.+.|+.+....+ +.++ +|+.-+-+.+
T Consensus 305 ~l~el-l~~aDiVi~~~~t~~lI~~~~l~~M-K~ga-iliNvgrg~~ 348 (479)
T 1v8b_A 305 TLDEI-VDKGDFFITCTGNVDVIKLEHLLKM-KNNA-VVGNIGHFDD 348 (479)
T ss_dssp CHHHH-TTTCSEEEECCSSSSSBCHHHHTTC-CTTC-EEEECSSTTT
T ss_pred CHHHH-HhcCCEEEECCChhhhcCHHHHhhc-CCCc-EEEEeCCCCc
Confidence 11122 2379999998 45678888776665 4455 5555555554
No 100
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=95.42 E-value=0.017 Score=58.14 Aligned_cols=112 Identities=21% Similarity=0.225 Sum_probs=69.1
Q ss_pred CceEEEEecchHHHH-HHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCC
Q 008128 416 GLRCVVSGSGKIAMH-VLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAK 493 (577)
Q Consensus 416 GkrVaIQGfGNVG~~-aA~~L~e-~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~e 493 (577)
-.||.|.|+|++|+. .++.|.+ .+..+++|+|. +++ ++ .+..+..+ +. ..+..+
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~-----~~~-----~~---~~~~~~~g-~~----------~~~~~~ 60 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSP-----TRA-----KA---LPICESWR-IP----------YADSLS 60 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECS-----SCT-----TH---HHHHHHHT-CC----------BCSSHH
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECC-----CHH-----HH---HHHHHHcC-CC----------ccCcHH
Confidence 468999999999985 7787766 47899999997 333 22 11111111 11 111111
Q ss_pred ccccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCC-HHHHH---HHHhCCcEEecc
Q 008128 494 PWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCT-PEAVD---VLKKANVLIAPA 553 (577)
Q Consensus 494 il~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T-~eA~~---iL~~rGI~viPD 553 (577)
.+..++|+++-|. .+....+.+...++.+..+++|-- +.+| .++++ ..+++|+.+...
T Consensus 61 ~l~~~~D~V~i~t-p~~~h~~~~~~al~~G~~v~~eKP-~~~~~~~~~~l~~~a~~~g~~~~~~ 122 (319)
T 1tlt_A 61 SLAASCDAVFVHS-STASHFDVVSTLLNAGVHVCVDKP-LAENLRDAERLVELAARKKLTLMVG 122 (319)
T ss_dssp HHHTTCSEEEECS-CTTHHHHHHHHHHHTTCEEEEESS-SCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred HhhcCCCEEEEeC-CchhHHHHHHHHHHcCCeEEEeCC-CCCCHHHHHHHHHHHHHcCCeEEEe
Confidence 1255799999665 466677888777888888999841 1123 34443 335678766543
No 101
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=95.41 E-value=0.027 Score=57.32 Aligned_cols=111 Identities=16% Similarity=0.209 Sum_probs=73.8
Q ss_pred ceEEEEec-chHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC-CCc
Q 008128 417 LRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKP 494 (577)
Q Consensus 417 krVaIQGf-GNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~-~ei 494 (577)
.||.|.|+ |.+|..-++.|.+.+.++++|+|. +++- ... .+.+++.+.+++ +++
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~-----~~~~---~~~----------------~~~~~~~~~~~~~~~l 59 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDI-----NDSV---GII----------------DSISPQSEFFTEFEFF 59 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEEECS-----SCCC---GGG----------------GGTCTTCEEESSHHHH
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcC-----CHHH---HHH----------------HhhCCCCcEECCHHHH
Confidence 58999999 789999899998889999999998 3321 110 112344444433 344
Q ss_pred c----------ccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHH---HhCCcEEec
Q 008128 495 W----------NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVL---KKANVLIAP 552 (577)
Q Consensus 495 l----------~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL---~~rGI~viP 552 (577)
+ +.++|+++=|+ .+..+.+.+...++.|..++||=-=.....|+++++ +++|+.+..
T Consensus 60 l~~~~~l~~~~~~~vD~V~I~t-P~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v 129 (318)
T 3oa2_A 60 LDHASNLKRDSATALDYVSICS-PNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLYN 129 (318)
T ss_dssp HHHHHHHTTSTTTSCCEEEECS-CGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHTCCEEE
T ss_pred HHhhhhhhhccCCCCcEEEECC-CcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHhCCEEEE
Confidence 4 46789888655 567788888888888999999952122234555443 566765543
No 102
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=95.40 E-value=0.052 Score=56.54 Aligned_cols=99 Identities=15% Similarity=0.219 Sum_probs=62.4
Q ss_pred ceEEEEecchHHHHHHHHHHHC---CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCccccccc----c--cCC--
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY---GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK----T--YAR-- 485 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~---GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~----~--~p~-- 485 (577)
.||+|.|||.+|+.+++.|.+. ...||+|.|. .|++.+..|.++....|.+..-.. . +.+
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~---------~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~ 73 (339)
T 3b1j_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT---------SDARTAAHLLEYDSVLGRFNADISYDENSITVNGKT 73 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECS---------SCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEE
T ss_pred eEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecC---------CCHHHHHHHhccccccCCCCCcEEEcCCeeeecCce
Confidence 4899999999999999999886 3789999884 244444444444333333221110 0 001
Q ss_pred ceEeC---CCC-ccc-cccceeecCCcccccchhhHhhhhccCce
Q 008128 486 SKYYD---EAK-PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCR 525 (577)
Q Consensus 486 a~~i~---~~e-il~-~~cDIlIPcA~~n~It~enA~~l~~~~ak 525 (577)
...+. +++ .|. ..|||++.|+. .-.+.+.+...++.+||
T Consensus 74 i~v~~~~dp~~l~w~~~~vDvV~e~tg-~~~s~e~a~~~l~~Gak 117 (339)
T 3b1j_A 74 MKIVCDRNPLNLPWKEWDIDLVIESTG-VFVTAEGASKHIQAGAK 117 (339)
T ss_dssp EEEECCSCGGGSCTTTTTCCEEEECSS-SCCBHHHHHHHHHTTCS
T ss_pred EEEEecCChHHCcccccCCCEEEECCC-ccccHHHHHHHHHcCCc
Confidence 11111 123 364 58999999974 45678888888888888
No 103
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=95.39 E-value=0.021 Score=58.89 Aligned_cols=111 Identities=18% Similarity=0.179 Sum_probs=70.9
Q ss_pred CCceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC-C
Q 008128 415 KGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-A 492 (577)
Q Consensus 415 ~GkrVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~-~ 492 (577)
+-.+|+|.|+|++|...++.|.+. ++++++|+|. |.+++. ..+.. +...+++ +
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~----------~~~~~~----~a~~~-----------g~~~~~~~~ 58 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDI----------LAEKRE----AAAQK-----------GLKIYESYE 58 (359)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS----------SHHHHH----HHHTT-----------TCCBCSCHH
T ss_pred CcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcC----------CHHHHH----HHHhc-----------CCceeCCHH
Confidence 446899999999999888888876 7899999997 223321 11111 1111221 3
Q ss_pred Ccc-ccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHH---HHhCCcEEe
Q 008128 493 KPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDV---LKKANVLIA 551 (577)
Q Consensus 493 eil-~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~i---L~~rGI~vi 551 (577)
+++ +.++|+++=|. .+..+.+.+...++.+..++||=-=.....+++++ .+++|+.+.
T Consensus 59 ~ll~~~~~D~V~i~t-p~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~ 120 (359)
T 3e18_A 59 AVLADEKVDAVLIAT-PNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFM 120 (359)
T ss_dssp HHHHCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEE
T ss_pred HHhcCCCCCEEEEcC-CcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEE
Confidence 444 35789999665 56677888888888898999995111122345433 356676554
No 104
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=95.37 E-value=0.029 Score=55.67 Aligned_cols=109 Identities=11% Similarity=0.077 Sum_probs=62.6
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCccc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWN 496 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil~ 496 (577)
++|.|.|.|++|..+|+.|.+.|..| .+.|. ++ +++..+.+ . +....+..+-.-
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V-~~~dr-----~~-----~~~~~~~~---~------------g~~~~~~~~~~~ 55 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDV-TVWNR-----NP-----AKCAPLVA---L------------GARQASSPAEVC 55 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCE-EEECS-----SG-----GGGHHHHH---H------------TCEECSCHHHHH
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeE-EEEcC-----CH-----HHHHHHHH---C------------CCeecCCHHHHH
Confidence 47999999999999999999999885 45565 22 23322221 1 112111101112
Q ss_pred cccceeecCCcccccchhhH---hhhh---ccCceEEEecCCCC-C-CHHHHHHHHhCCcEEec
Q 008128 497 ERCDVAFPCASQNEIDQSDA---INLV---NSGCRILVEGSNMP-C-TPEAVDVLKKANVLIAP 552 (577)
Q Consensus 497 ~~cDIlIPcA~~n~It~enA---~~l~---~~~akiVvEgAN~p-~-T~eA~~iL~~rGI~viP 552 (577)
.+||++|-|........+.. ..+. ..+ ++|+.-++.. . +.+..+.+.++|+.++.
T Consensus 56 ~~advvi~~v~~~~~~~~v~~~~~~l~~~l~~g-~~vv~~st~~~~~~~~~~~~~~~~g~~~~~ 118 (287)
T 3pdu_A 56 AACDITIAMLADPAAAREVCFGANGVLEGIGGG-RGYIDMSTVDDETSTAIGAAVTARGGRFLE 118 (287)
T ss_dssp HHCSEEEECCSSHHHHHHHHHSTTCGGGTCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HcCCEEEEEcCCHHHHHHHHcCchhhhhcccCC-CEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 37899999887653333322 2222 234 4555555543 2 23445678889988763
No 105
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=95.37 E-value=0.053 Score=55.80 Aligned_cols=108 Identities=12% Similarity=0.143 Sum_probs=63.6
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~ 490 (577)
+.++.|++|.|.|+|++|+.+|+.|...|.+|+ +.|.+ ++ .+. ..+. +.++.+
T Consensus 145 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~-~~d~~-----~~---~~~---~~~~---------------g~~~~~ 197 (334)
T 2dbq_A 145 GYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRIL-YYSRT-----RK---EEV---EREL---------------NAEFKP 197 (334)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSS-----CC---HHH---HHHH---------------CCEECC
T ss_pred ccCCCCCEEEEEccCHHHHHHHHHHHhCCCEEE-EECCC-----cc---hhh---Hhhc---------------CcccCC
Confidence 457999999999999999999999999999965 44542 21 111 1110 111111
Q ss_pred CCCccccccceeecCCcc-----cccchhhHhhhhccCceEEEecCCCC-CCHHH-HHHHHhCCc
Q 008128 491 EAKPWNERCDVAFPCASQ-----NEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANV 548 (577)
Q Consensus 491 ~~eil~~~cDIlIPcA~~-----n~It~enA~~l~~~~akiVvEgAN~p-~T~eA-~~iL~~rGI 548 (577)
.+++ -.+||+++-|... +.++.+....+ +.++ +|+.-+.++ ++.++ .+.|++..|
T Consensus 198 l~~~-l~~aDvVil~vp~~~~t~~~i~~~~~~~m-k~~a-ilIn~srg~~v~~~aL~~aL~~~~i 259 (334)
T 2dbq_A 198 LEDL-LRESDFVVLAVPLTRETYHLINEERLKLM-KKTA-ILINIARGKVVDTNALVKALKEGWI 259 (334)
T ss_dssp HHHH-HHHCSEEEECCCCCTTTTTCBCHHHHHHS-CTTC-EEEECSCGGGBCHHHHHHHHHHTSS
T ss_pred HHHH-HhhCCEEEECCCCChHHHHhhCHHHHhcC-CCCc-EEEECCCCcccCHHHHHHHHHhCCe
Confidence 1111 2378998887654 34444444443 3455 445556666 44444 466766544
No 106
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=95.35 E-value=0.033 Score=56.51 Aligned_cols=113 Identities=12% Similarity=0.189 Sum_probs=69.9
Q ss_pred ceEEEEecchHHH-HHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC-CCC
Q 008128 417 LRCVVSGSGKIAM-HVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAK 493 (577)
Q Consensus 417 krVaIQGfGNVG~-~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~-~~e 493 (577)
.||.|+|+|++|+ +.+..+.+. +++|++|+|. |.+++ .+..++.+ -...++ -++
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~----------~~~~a---~~~a~~~g----------~~~~y~d~~e 80 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASR----------DLTRA---REMADRFS----------VPHAFGSYEE 80 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECS----------SHHHH---HHHHHHHT----------CSEEESSHHH
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECC----------CHHHH---HHHHHHcC----------CCeeeCCHHH
Confidence 4999999999997 556777664 7899999997 33343 22222222 111222 244
Q ss_pred cc-ccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHH---HhCCcEEecc
Q 008128 494 PW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVL---KKANVLIAPA 553 (577)
Q Consensus 494 il-~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL---~~rGI~viPD 553 (577)
++ +.++|+++=|+ .+..+.+.+...++.|..++||=-=.....||++++ +++|+.+...
T Consensus 81 ll~~~~iDaV~I~t-P~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~ 143 (350)
T 4had_A 81 MLASDVIDAVYIPL-PTSQHIEWSIKAADAGKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEA 143 (350)
T ss_dssp HHHCSSCSEEEECS-CGGGHHHHHHHHHHTTCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEEC
T ss_pred HhcCCCCCEEEEeC-CCchhHHHHHHHHhcCCEEEEeCCcccchhhHHHHHHHHHHcCCceeEe
Confidence 55 34688888765 456777888777788888888842111234555443 4566655443
No 107
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=95.31 E-value=0.065 Score=55.44 Aligned_cols=105 Identities=16% Similarity=0.212 Sum_probs=64.3
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~ 490 (577)
+.++.|++|.|.|+|++|+.+|+.|...|.+|+ +.|.+ ++-. . +....+
T Consensus 159 ~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~-~~dr~-----~~~~--------------~-----------g~~~~~ 207 (333)
T 3ba1_A 159 TTKFSGKRVGIIGLGRIGLAVAERAEAFDCPIS-YFSRS-----KKPN--------------T-----------NYTYYG 207 (333)
T ss_dssp CCCCTTCCEEEECCSHHHHHHHHHHHTTTCCEE-EECSS-----CCTT--------------C-----------CSEEES
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHHCCCEEE-EECCC-----chhc--------------c-----------CceecC
Confidence 457999999999999999999999999999965 44542 1100 0 011111
Q ss_pred C-CCccccccceeecCCc-----ccccchhhHhhhhccCceEEEecCCCCC-CHHH-HHHHHhCCcE
Q 008128 491 E-AKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMPC-TPEA-VDVLKKANVL 549 (577)
Q Consensus 491 ~-~eil~~~cDIlIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~p~-T~eA-~~iL~~rGI~ 549 (577)
. +++ -.+|||++-|.. .+.|+.+....+ +.++ +|+.-+.+++ +.++ .+.|++.+|.
T Consensus 208 ~l~el-l~~aDvVil~vP~~~~t~~li~~~~l~~m-k~ga-ilIn~srG~~vd~~aL~~aL~~g~i~ 271 (333)
T 3ba1_A 208 SVVEL-ASNSDILVVACPLTPETTHIINREVIDAL-GPKG-VLINIGRGPHVDEPELVSALVEGRLG 271 (333)
T ss_dssp CHHHH-HHTCSEEEECSCCCGGGTTCBCHHHHHHH-CTTC-EEEECSCGGGBCHHHHHHHHHHTSSC
T ss_pred CHHHH-HhcCCEEEEecCCChHHHHHhhHHHHhcC-CCCC-EEEECCCCchhCHHHHHHHHHcCCCe
Confidence 1 111 237888887754 355555555544 4455 5566666663 3333 5777776553
No 108
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=95.30 E-value=0.054 Score=55.54 Aligned_cols=110 Identities=13% Similarity=0.115 Sum_probs=64.8
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~ 490 (577)
+.++.|+||.|.|+|++|+.+|+.|...|.+|+++ |.. +. +.+.. .+ . ++++.+
T Consensus 141 ~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~-d~~------~~-~~~~~---~~----~-----------g~~~~~ 194 (320)
T 1gdh_A 141 GEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYF-DTH------RA-SSSDE---AS----Y-----------QATFHD 194 (320)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEE-CSS------CC-CHHHH---HH----H-----------TCEECS
T ss_pred CcCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEE-CCC------Cc-Chhhh---hh----c-----------CcEEcC
Confidence 35789999999999999999999999999997643 320 21 11110 10 0 122221
Q ss_pred C-CCccccccceeecCCc-----ccccchhhHhhhhccCceEEEecCCCC-CCHHH-HHHHHhCCcE
Q 008128 491 E-AKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (577)
Q Consensus 491 ~-~eil~~~cDIlIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~p-~T~eA-~~iL~~rGI~ 549 (577)
. ++++ ..|||++-|.. .+.|+.+....+ +.++ +|+.-+-+. ++.++ .+.|++.+|.
T Consensus 195 ~l~ell-~~aDvVil~~p~~~~t~~~i~~~~l~~m-k~ga-ilIn~arg~~vd~~aL~~aL~~g~i~ 258 (320)
T 1gdh_A 195 SLDSLL-SVSQFFSLNAPSTPETRYFFNKATIKSL-PQGA-IVVNTARGDLVDNELVVAALEAGRLA 258 (320)
T ss_dssp SHHHHH-HHCSEEEECCCCCTTTTTCBSHHHHTTS-CTTE-EEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred CHHHHH-hhCCEEEEeccCchHHHhhcCHHHHhhC-CCCc-EEEECCCCcccCHHHHHHHHHhCCCc
Confidence 1 1222 37898888755 345655544444 3344 555555555 45444 5677776543
No 109
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=95.30 E-value=0.061 Score=56.39 Aligned_cols=104 Identities=16% Similarity=0.280 Sum_probs=68.9
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccc------cCCceE--
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT------YARSKY-- 488 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~------~p~a~~-- 488 (577)
.||.|-|||.+|+.+++.+.+.|..||+|.|. -+|.+.+..|+++-..+|.+..-++. + +.+.
T Consensus 8 ~kvgInGFGRIGrlv~R~~~~~~veivainDp--------~~d~~~~a~l~~yDS~hG~f~~~v~~~~~~l~i-~Gk~I~ 78 (346)
T 3h9e_O 8 LTVGINGFGRIGRLVLRACMEKGVKVVAVNDP--------FIDPEYMVYMFKYDSTHGRYKGSVEFRNGQLVV-DNHEIS 78 (346)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECT--------TCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEE-TTEEEE
T ss_pred eEEEEECCChHHHHHHHHHHhCCCEEEEEeCC--------CCChhHhcccccccCCCCCCCCcEEEcCCEEEE-CCEEEE
Confidence 58999999999999999999889999999875 23666666666554444544321110 1 1111
Q ss_pred -e---CCCC-cc-ccccceeecCCcccccchhhHhhhhccCce-EEEec
Q 008128 489 -Y---DEAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVEG 530 (577)
Q Consensus 489 -i---~~~e-il-~~~cDIlIPcA~~n~It~enA~~l~~~~ak-iVvEg 530 (577)
. ++++ .| +..+|+++.|+ +.-.+.+-|+.-++.||| +|+-+
T Consensus 79 v~~e~dp~~i~W~~~gvDiVlesT-G~f~s~e~a~~hl~aGAkkVVIsa 126 (346)
T 3h9e_O 79 VYQCKEPKQIPWRAVGSPYVVEST-GVYLSIQAASDHISAGAQRVVISA 126 (346)
T ss_dssp EECCSSGGGCCGGGGTSCEEEECS-SSCCSHHHHHHHHHTTCSEEEESS
T ss_pred EEecCChhhCCcccccccEEEEec-cccCCHHHHHHHHHcCCCEEEECC
Confidence 1 1222 25 45799999987 455678888877788884 55543
No 110
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=95.30 E-value=0.043 Score=55.71 Aligned_cols=111 Identities=12% Similarity=0.085 Sum_probs=71.4
Q ss_pred ceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC-CCCc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAKP 494 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~-~~ei 494 (577)
.||.|.|+|++|...++.|.+. +..+++|+|. |.+++ .+..+..+ ....+ .+++
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~----------~~~~~---~~~a~~~g-----------~~~~~~~~~~ 60 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADP----------FIEGA---QRLAEANG-----------AEAVASPDEV 60 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS----------SHHHH---HHHHHTTT-----------CEEESSHHHH
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECC----------CHHHH---HHHHHHcC-----------CceeCCHHHH
Confidence 5899999999999999988885 7899999997 33332 22222222 22222 2344
Q ss_pred cc-cccceeecCCcccccchhhHhhhhccCceEEEecCCCCCC-HHHHHH---HHhCCcEEecc
Q 008128 495 WN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCT-PEAVDV---LKKANVLIAPA 553 (577)
Q Consensus 495 l~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T-~eA~~i---L~~rGI~viPD 553 (577)
+. .++|+++-|. .+..+.+.+...++.+..+++|-- +-+| .++.++ .+++|+.+...
T Consensus 61 l~~~~~D~V~i~t-p~~~h~~~~~~al~~gk~v~~EKP-~~~~~~~~~~l~~~a~~~g~~~~v~ 122 (344)
T 3euw_A 61 FARDDIDGIVIGS-PTSTHVDLITRAVERGIPALCEKP-IDLDIEMVRACKEKIGDGASKVMLG 122 (344)
T ss_dssp TTCSCCCEEEECS-CGGGHHHHHHHHHHTTCCEEECSC-SCSCHHHHHHHHHHHGGGGGGEEEC
T ss_pred hcCCCCCEEEEeC-CchhhHHHHHHHHHcCCcEEEECC-CCCCHHHHHHHHHHHHhcCCeEEec
Confidence 43 5789999876 556677778778888888999852 1123 344433 35667655543
No 111
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=95.29 E-value=0.031 Score=54.10 Aligned_cols=101 Identities=20% Similarity=0.214 Sum_probs=69.5
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCccc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWN 496 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil~ 496 (577)
+||.|.|+|++|+..++.|.+.|..++++.|++. . .+ + .| . +.++++.
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~-----~-~~--~---------------~~----~-----~~~~l~~ 48 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRG-----E-HE--K---------------MV----R-----GIDEFLQ 48 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSC-----C-CT--T---------------EE----S-----SHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCc-----c-hh--h---------------hc----C-----CHHHHhc
Confidence 3799999999999999999888999999999732 1 00 0 00 0 1122333
Q ss_pred cccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHH-H---HHHHhCCcEE
Q 008128 497 ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEA-V---DVLKKANVLI 550 (577)
Q Consensus 497 ~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA-~---~iL~~rGI~v 550 (577)
.++|+++-|+... ...+.+...++.+..+|+|..-.+..+++ + +..+++|+.+
T Consensus 49 ~~~DvVv~~~~~~-~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~ 105 (236)
T 2dc1_A 49 REMDVAVEAASQQ-AVKDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRRV 105 (236)
T ss_dssp SCCSEEEECSCHH-HHHHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCE
T ss_pred CCCCEEEECCCHH-HHHHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCeE
Confidence 5789999998644 67777777778899999996544444544 2 4446677753
No 112
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.26 E-value=0.12 Score=45.78 Aligned_cols=112 Identities=12% Similarity=0.172 Sum_probs=67.1
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCccc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWN 496 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil~ 496 (577)
.+|+|.|+|.+|+.+|+.|.+.|..|+.| |. |.+.+. +.++ .+ +.-+ +.++ +..+.|.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vi-d~----------~~~~~~---~~~~-~g-~~~i---~gd~---~~~~~l~ 65 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVI-ET----------SRTRVD---ELRE-RG-VRAV---LGNA---ANEEIMQ 65 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEE-ES----------CHHHHH---HHHH-TT-CEEE---ESCT---TSHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEE-EC----------CHHHHH---HHHH-cC-CCEE---ECCC---CCHHHHH
Confidence 47999999999999999999999996654 44 333432 2221 11 1100 0000 1112231
Q ss_pred ----cccceeecCCcccccch---hhHhhhhccCceEEEecCCCCCCHHHHHHHHhCCc--EEecchh
Q 008128 497 ----ERCDVAFPCASQNEIDQ---SDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANV--LIAPAMA 555 (577)
Q Consensus 497 ----~~cDIlIPcA~~n~It~---enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI--~viPD~~ 555 (577)
.++|++|-|...+..+. ..++.+ ...+++|+... +++-.+.|++.|+ ++.|...
T Consensus 66 ~a~i~~ad~vi~~~~~~~~n~~~~~~a~~~-~~~~~iiar~~----~~~~~~~l~~~G~d~vi~p~~~ 128 (140)
T 3fwz_A 66 LAHLECAKWLILTIPNGYEAGEIVASARAK-NPDIEIIARAH----YDDEVAYITERGANQVVMGERE 128 (140)
T ss_dssp HTTGGGCSEEEECCSCHHHHHHHHHHHHHH-CSSSEEEEEES----SHHHHHHHHHTTCSEEEEHHHH
T ss_pred hcCcccCCEEEEECCChHHHHHHHHHHHHH-CCCCeEEEEEC----CHHHHHHHHHCCCCEEECchHH
Confidence 37899998877655443 334333 34678888653 4566788999997 4556543
No 113
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=95.25 E-value=0.064 Score=55.84 Aligned_cols=103 Identities=16% Similarity=0.286 Sum_probs=64.6
Q ss_pred ceEEEEecchHHHHHHHHHHH---C-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCccccccc----c--cCC-
Q 008128 417 LRCVVSGSGKIAMHVLEKLIA---Y-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK----T--YAR- 485 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e---~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~----~--~p~- 485 (577)
.||+|.|||.+|+.+++.|.+ . ...||+|.|. .|.+.+..+.++....|.+..-.. . +.+
T Consensus 3 ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~---------~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~ 73 (339)
T 2x5j_O 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINEL---------ADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDD 73 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECS---------SCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTE
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCC---------CCHHHHHHHhcccccCCCCCceEEEcCCeeEECCE
Confidence 489999999999999999988 4 6789999874 245554444443333333321100 0 001
Q ss_pred -ceEe---CCCC-ccc-cccceeecCCcccccchhhHhhhhccCce-EEEe
Q 008128 486 -SKYY---DEAK-PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVE 529 (577)
Q Consensus 486 -a~~i---~~~e-il~-~~cDIlIPcA~~n~It~enA~~l~~~~ak-iVvE 529 (577)
.+.. ++++ .|. ..+||++.|+. .-.+.+.|...++.+|| +|+.
T Consensus 74 ~i~v~~~~dp~~l~~~~~~vDvV~e~tg-~~~s~e~a~~~l~~GakkVVId 123 (339)
T 2x5j_O 74 AIRVLHERSLQSLPWRELGVDVVLDCTG-VYGSREHGEAHIAAGAKKVLFS 123 (339)
T ss_dssp EEEEECCSSGGGCCHHHHTCSEEEECSS-SCCSHHHHHHHHHTTCSEEEES
T ss_pred EEEEEecCChHHCcccccCCCEEEECCC-ccccHHHHHHHHHcCCCEEEEe
Confidence 1111 1122 353 48999999874 45678888888888988 4454
No 114
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=95.25 E-value=0.031 Score=57.73 Aligned_cols=111 Identities=13% Similarity=0.088 Sum_probs=69.8
Q ss_pred CceEEEEecchHHHH-HHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC-C
Q 008128 416 GLRCVVSGSGKIAMH-VLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-A 492 (577)
Q Consensus 416 GkrVaIQGfGNVG~~-aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~-~ 492 (577)
-.||+|.|+|++|.. .+..|.+. ++++++|+|.+ .+++ . +. +++...+++ +
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~----------~~~~---~---~~----------~~~~~~~~~~~ 60 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRD----------EEKV---K---RD----------LPDVTVIASPE 60 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSC----------HHHH---H---HH----------CTTSEEESCHH
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCC----------HHHH---H---hh----------CCCCcEECCHH
Confidence 368999999999985 67777665 78999999972 2232 1 11 123333322 3
Q ss_pred Cccc-cccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHH---HHHHhCCcEEecc
Q 008128 493 KPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV---DVLKKANVLIAPA 553 (577)
Q Consensus 493 eil~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~---~iL~~rGI~viPD 553 (577)
+++. .++|+++-|+ .+..+.+.+...++.+..+++|=-=.....+++ +..+++|+.+...
T Consensus 61 ~ll~~~~~D~V~i~t-p~~~H~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~ 124 (364)
T 3e82_A 61 AAVQHPDVDLVVIAS-PNATHAPLARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQRLLSVF 124 (364)
T ss_dssp HHHTCTTCSEEEECS-CGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred HHhcCCCCCEEEEeC-ChHHHHHHHHHHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEE
Confidence 4453 5789888875 566777888877888888998841111123444 3346777766543
No 115
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=95.24 E-value=0.039 Score=57.08 Aligned_cols=35 Identities=26% Similarity=0.421 Sum_probs=31.8
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEE
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaI 445 (577)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++.
T Consensus 135 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~ 169 (324)
T 3hg7_A 135 YQGLKGRTLLILGTGSIGQHIAHTGKHFGMKVLGV 169 (324)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CcccccceEEEEEECHHHHHHHHHHHhCCCEEEEE
Confidence 35799999999999999999999999999997654
No 116
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=95.24 E-value=0.055 Score=54.80 Aligned_cols=113 Identities=19% Similarity=0.195 Sum_probs=67.8
Q ss_pred CCceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEe-CCC
Q 008128 415 KGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEA 492 (577)
Q Consensus 415 ~GkrVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i-~~~ 492 (577)
+-.||.|.|+|++|...++.|.+. ++.+++|+|. +++-.. + . .+.++..... +.+
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~-----~~~~~~--~------~----------a~~~~~~~~~~~~~ 60 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSR-----TLESAQ--A------F----------ANKYHLPKAYDKLE 60 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECS-----CSSTTC--C-------------------CCCCSCEESCHH
T ss_pred CceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcC-----CHHHHH--H------H----------HHHcCCCcccCCHH
Confidence 346899999999999888888764 6789999997 333211 0 0 1111111112 223
Q ss_pred Cccc-cccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHH---HHhCCcEEe
Q 008128 493 KPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDV---LKKANVLIA 551 (577)
Q Consensus 493 eil~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~i---L~~rGI~vi 551 (577)
+++. .++|+++=|. .+..+.+.+...++.+..+++|=-=.....+++++ .+++|+.+.
T Consensus 61 ~ll~~~~~D~V~i~t-p~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~ 122 (329)
T 3evn_A 61 DMLADESIDVIYVAT-INQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLM 122 (329)
T ss_dssp HHHTCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEE
T ss_pred HHhcCCCCCEEEECC-CcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 4443 4788888665 45667777777778888888885211122344433 356776554
No 117
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=95.23 E-value=0.04 Score=57.62 Aligned_cols=104 Identities=15% Similarity=0.288 Sum_probs=65.3
Q ss_pred ceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccC-----Cce---
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYA-----RSK--- 487 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p-----~a~--- 487 (577)
.||+|-|||-+|+.+++.|.+. ...||+|.|. .|.+-+..|+++...+|.+.+-.+.-. +.+
T Consensus 3 ikV~InGfGrIGr~v~r~l~~~~~~evvaInd~---------~~~~~~a~ll~yDs~hG~~~~~v~~~~~~l~v~Gk~i~ 73 (342)
T 2ep7_A 3 IKVGINGFGRIGRSFFRASWGREEIEIVAINDL---------TDAKHLAHLLKYDSVHGIFKGSVEAKDDSIVVDGKEIK 73 (342)
T ss_dssp CEEEEECCSHHHHHHHHHHTTCTTCEEEEEECS---------SCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecC---------CChHHHhhhhhcccccccCCCcEEEcCCEEEECCEEEE
Confidence 4899999999999999998876 6899999984 244444444444333332211100000 111
Q ss_pred EeC---CCC-cc-ccccceeecCCcccccchhhHhhhhccCce-EEEec
Q 008128 488 YYD---EAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVEG 530 (577)
Q Consensus 488 ~i~---~~e-il-~~~cDIlIPcA~~n~It~enA~~l~~~~ak-iVvEg 530 (577)
... +++ .| +..+||++.|+ +...+.+.|+..++.||| +|+-+
T Consensus 74 v~~~~dp~~~~w~~~gvDiV~est-G~~~s~e~a~~hl~aGakkVvisa 121 (342)
T 2ep7_A 74 VFAQKDPSQIPWGDLGVDVVIEAT-GVFRDRENASKHLQGGAKKVIITA 121 (342)
T ss_dssp EECCSSGGGCCHHHHTCSEEEECS-SSCCBHHHHTTTGGGTCSEEEESS
T ss_pred EEEcCChhhCCccccCCCEEEECC-CchhhhhhhHHHHhcCCCEEEecC
Confidence 111 111 25 35899999986 456788889888888996 45544
No 118
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=95.22 E-value=0.081 Score=56.22 Aligned_cols=37 Identities=19% Similarity=0.134 Sum_probs=32.5
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
+.++.|||+.|.|+|++|+.+|+.|...|.+|++ .|.
T Consensus 140 ~~el~gktlGiIGlG~IG~~vA~~l~~~G~~V~~-~d~ 176 (404)
T 1sc6_A 140 SFEARGKKLGIIGYGHIGTQLGILAESLGMYVYF-YDI 176 (404)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEE-ECS
T ss_pred ccccCCCEEEEEeECHHHHHHHHHHHHCCCEEEE-EcC
Confidence 4689999999999999999999999999999754 444
No 119
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=95.22 E-value=0.061 Score=57.02 Aligned_cols=99 Identities=15% Similarity=0.219 Sum_probs=62.6
Q ss_pred ceEEEEecchHHHHHHHHHHHC---CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCccccccc----c--cCC--
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY---GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK----T--YAR-- 485 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~---GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~----~--~p~-- 485 (577)
.||+|.|||.+|+.+++.|.+. ...||+|.|. .|.+.+..|.++....|.+..-+. . +.+
T Consensus 3 ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~---------~d~~~~a~ll~yds~~G~~~~~v~~~~~~l~v~g~~ 73 (380)
T 2d2i_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT---------SDARTAAHLLEYDSVLGRFNADISYDENSITVNGKT 73 (380)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECS---------SCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEE
T ss_pred cEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecC---------CCHHHHHHhhcccccCCCCCCcEEEeCCeEEECCeE
Confidence 4899999999999999999876 3789999884 255554445544333333221100 0 001
Q ss_pred ceEeC---CCC-ccc-cccceeecCCcccccchhhHhhhhccCce
Q 008128 486 SKYYD---EAK-PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCR 525 (577)
Q Consensus 486 a~~i~---~~e-il~-~~cDIlIPcA~~n~It~enA~~l~~~~ak 525 (577)
...+. +++ .|. ..+||++.|+. .-.+.+.|...++.|||
T Consensus 74 i~v~~~~dp~~l~w~~~gvDvV~e~TG-~f~s~e~a~~hl~aGak 117 (380)
T 2d2i_A 74 MKIVCDRNPLNLPWKEWDIDLVIESTG-VFVTAEGASKHIQAGAK 117 (380)
T ss_dssp EEEECCSCGGGCCHHHHTCCEEEECSS-SCCBHHHHHHHHHTTCS
T ss_pred EEEEecCChHHCCcccCCCCEEEECCC-ccccHHHHHHHHHcCCc
Confidence 11111 123 253 58999999975 45667888888888888
No 120
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=95.21 E-value=0.041 Score=55.94 Aligned_cols=115 Identities=17% Similarity=0.137 Sum_probs=68.6
Q ss_pred CCCceEEEEecchHHHHHHHHHHH--------CCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCC
Q 008128 414 LKGLRCVVSGSGKIAMHVLEKLIA--------YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYAR 485 (577)
Q Consensus 414 l~GkrVaIQGfGNVG~~aA~~L~e--------~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~ 485 (577)
.+-.||.|+|+|.+|+.-++.+.. .+++||+|+|. |++ ++ .+..++. +.
T Consensus 23 MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~-----~~~-----~a---~~~a~~~----------g~ 79 (393)
T 4fb5_A 23 MKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEA-----NAG-----LA---EARAGEF----------GF 79 (393)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC-------T-----TH---HHHHHHH----------TC
T ss_pred CCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECC-----CHH-----HH---HHHHHHh----------CC
Confidence 455799999999999865554432 36899999998 332 22 2222221 11
Q ss_pred ceEeCC-CCcc-ccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHH---HhCCcEEec
Q 008128 486 SKYYDE-AKPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVL---KKANVLIAP 552 (577)
Q Consensus 486 a~~i~~-~eil-~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL---~~rGI~viP 552 (577)
.+.+++ ++++ +.++|+++=|+ .+..+.+.+...++.+..++||=-=.....||++++ +++|+.+..
T Consensus 80 ~~~y~d~~ell~~~~iDaV~Iat-P~~~H~~~a~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~v 150 (393)
T 4fb5_A 80 EKATADWRALIADPEVDVVSVTT-PNQFHAEMAIAALEAGKHVWCEKPMAPAYADAERMLATAERSGKVAAL 150 (393)
T ss_dssp SEEESCHHHHHHCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHSSSCEEE
T ss_pred CeecCCHHHHhcCCCCcEEEECC-ChHHHHHHHHHHHhcCCeEEEccCCcccHHHHHHhhhhHHhcCCcccc
Confidence 122222 4455 34678777655 566778888877788888888842222234555444 566765543
No 121
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=95.21 E-value=0.1 Score=53.70 Aligned_cols=36 Identities=22% Similarity=0.218 Sum_probs=32.6
Q ss_pred CCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEc
Q 008128 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISD 447 (577)
.++.|+||.|.|+|++|+.+|+.|...|.+|++..-
T Consensus 135 ~~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr 170 (315)
T 3pp8_A 135 YTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSR 170 (315)
T ss_dssp CCSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEES
T ss_pred CCcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcC
Confidence 578999999999999999999999999999877643
No 122
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.19 E-value=0.031 Score=57.95 Aligned_cols=59 Identities=19% Similarity=0.263 Sum_probs=46.6
Q ss_pred CCCCcchHHHHHHHHHH--HHH---cCCCCCCceEEEEecch-HHHHHHHHHHHCCCeEEEEEcCC
Q 008128 390 LRTEATGYGLVFFAQLI--LAD---MNKELKGLRCVVSGSGK-IAMHVLEKLIAYGAIPVSVSDAK 449 (577)
Q Consensus 390 ~r~eATG~GV~~~~~~~--l~~---~g~~l~GkrVaIQGfGN-VG~~aA~~L~e~GAkVVaISDs~ 449 (577)
+-...|.+|++..++.. .+. .+.++.|++|+|.|.|+ ||..+|+.|...|++ |+|+|.+
T Consensus 146 ~~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAt-Vtv~nR~ 210 (320)
T 1edz_A 146 SILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGAT-VYSVDVN 210 (320)
T ss_dssp CCCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCE-EEEECSS
T ss_pred CcCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCE-EEEEeCc
Confidence 34578998886665542 000 47799999999999997 699999999999999 7788875
No 123
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=95.18 E-value=0.14 Score=51.06 Aligned_cols=138 Identities=14% Similarity=0.079 Sum_probs=78.5
Q ss_pred CcchHHHHHHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhh
Q 008128 393 EATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQ 472 (577)
Q Consensus 393 eATG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~ 472 (577)
.-++.|+...+++ .+.+++|++++|.|.|.+|+.+|+.|.+.| + |.|.|. +.+++..+.+....
T Consensus 109 nTd~~G~~~~L~~----~~~~l~~k~vlV~GaGgiG~aia~~L~~~G-~-V~v~~r----------~~~~~~~l~~~~~~ 172 (287)
T 1nvt_A 109 NTDGIGARMALEE----EIGRVKDKNIVIYGAGGAARAVAFELAKDN-N-IIIANR----------TVEKAEALAKEIAE 172 (287)
T ss_dssp CCHHHHHHHHHHH----HHCCCCSCEEEEECCSHHHHHHHHHHTSSS-E-EEEECS----------SHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHH----hCCCcCCCEEEEECchHHHHHHHHHHHHCC-C-EEEEEC----------CHHHHHHHHHHHhh
Confidence 3488888877764 456789999999999999999999999999 7 566776 22333222221111
Q ss_pred cCcccccccccCCceEeCCCCccccccceeecCCcccccch---h---hHhhhhccCceEEEecCCCC-CCHHHHHHHHh
Q 008128 473 QRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQ---S---DAINLVNSGCRILVEGSNMP-CTPEAVDVLKK 545 (577)
Q Consensus 473 ~g~l~~y~~~~p~a~~i~~~eil~~~cDIlIPcA~~n~It~---e---nA~~l~~~~akiVvEgAN~p-~T~eA~~iL~~ 545 (577)
.+..... + .....+-.+.+ .++||+|-|+.-..... . ....+ + .-.+|++-.-+| .|+ -.+..++
T Consensus 173 ~~~~~~~---~-~~d~~~~~~~~-~~~DilVn~ag~~~~~~~~~~~~~~~~~l-~-~~~~v~Dv~y~p~~t~-ll~~a~~ 244 (287)
T 1nvt_A 173 KLNKKFG---E-EVKFSGLDVDL-DGVDIIINATPIGMYPNIDVEPIVKAEKL-R-EDMVVMDLIYNPLETV-LLKEAKK 244 (287)
T ss_dssp HHTCCHH---H-HEEEECTTCCC-TTCCEEEECSCTTCTTCCSSCCSSCSTTC-C-SSSEEEECCCSSSSCH-HHHHHHT
T ss_pred hcccccc---e-eEEEeeHHHhh-CCCCEEEECCCCCCCCCCCCCCCCCHHHc-C-CCCEEEEeeeCCccCH-HHHHHHH
Confidence 0000000 0 01111101112 37899999987433210 0 11222 2 235777776566 454 3345678
Q ss_pred CCcEEecch
Q 008128 546 ANVLIAPAM 554 (577)
Q Consensus 546 rGI~viPD~ 554 (577)
+|+.++++.
T Consensus 245 ~G~~~~~Gl 253 (287)
T 1nvt_A 245 VNAKTINGL 253 (287)
T ss_dssp TTCEEECTH
T ss_pred CCCEEeCcH
Confidence 898776653
No 124
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=95.18 E-value=0.068 Score=52.10 Aligned_cols=99 Identities=12% Similarity=0.105 Sum_probs=60.4
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~ 490 (577)
..++.+++|.|.|.|++|...++.|.+.|..+|.+.|. +.+++.. ..+..+ ....+
T Consensus 5 ~~~~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~----------~~~~~~~---~~~~~g-----------~~~~~ 60 (266)
T 3d1l_A 5 KRSIEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSR----------TEESARE---LAQKVE-----------AEYTT 60 (266)
T ss_dssp --CGGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECS----------SHHHHHH---HHHHTT-----------CEEES
T ss_pred hcCCCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeC----------CHHHHHH---HHHHcC-----------CceeC
Confidence 34566789999999999999999999999887788876 2333322 222111 11111
Q ss_pred -CCCccccccceeecCCcccccchhhHhhhhcc--CceEEEecCCCCC
Q 008128 491 -EAKPWNERCDVAFPCASQNEIDQSDAINLVNS--GCRILVEGSNMPC 535 (577)
Q Consensus 491 -~~eil~~~cDIlIPcA~~n~It~enA~~l~~~--~akiVvEgAN~p~ 535 (577)
.++.+ .+||++|-|.....+ .+.+..+.+. .-++|+..+|+..
T Consensus 61 ~~~~~~-~~~Dvvi~av~~~~~-~~v~~~l~~~~~~~~ivv~~s~~~~ 106 (266)
T 3d1l_A 61 DLAEVN-PYAKLYIVSLKDSAF-AELLQGIVEGKREEALMVHTAGSIP 106 (266)
T ss_dssp CGGGSC-SCCSEEEECCCHHHH-HHHHHHHHTTCCTTCEEEECCTTSC
T ss_pred CHHHHh-cCCCEEEEecCHHHH-HHHHHHHHhhcCCCcEEEECCCCCc
Confidence 12222 378999999887755 4444444320 2346777766543
No 125
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=95.16 E-value=0.052 Score=55.07 Aligned_cols=117 Identities=15% Similarity=0.118 Sum_probs=72.3
Q ss_pred CCceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCC
Q 008128 415 KGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAK 493 (577)
Q Consensus 415 ~GkrVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~e 493 (577)
+-.||.|.|+|++|...++.|.+. +..+++|+|. ++ +++ .+..+..+....| -+.++
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~-----~~-----~~~---~~~~~~~~~~~~~---------~~~~~ 61 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASR-----RL-----ENA---QKMAKELAIPVAY---------GSYEE 61 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCS-----SS-----HHH---HHHHHHTTCCCCB---------SSHHH
T ss_pred CeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeC-----CH-----HHH---HHHHHHcCCCcee---------CCHHH
Confidence 346899999999999999999884 7899999997 22 232 2222222110111 11133
Q ss_pred cc-ccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHH---HHHhCCcEEecch
Q 008128 494 PW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVD---VLKKANVLIAPAM 554 (577)
Q Consensus 494 il-~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~---iL~~rGI~viPD~ 554 (577)
++ +.++|+++-|. .+..+.+.+...++.+..+++|--=.....++++ ..+++|+.+...+
T Consensus 62 ll~~~~~D~V~i~t-p~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~ 125 (330)
T 3e9m_A 62 LCKDETIDIIYIPT-YNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQ 125 (330)
T ss_dssp HHHCTTCSEEEECC-CGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECC
T ss_pred HhcCCCCCEEEEcC-CCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 44 34789988766 4556677777777888889998621112234443 3467787665443
No 126
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=95.16 E-value=0.074 Score=54.36 Aligned_cols=110 Identities=15% Similarity=0.162 Sum_probs=70.9
Q ss_pred ceEEEEecchHHHH-HHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC-CC
Q 008128 417 LRCVVSGSGKIAMH-VLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AK 493 (577)
Q Consensus 417 krVaIQGfGNVG~~-aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~-~e 493 (577)
.||.|.|+|++|.. .+..|.+. ++++++|+|. |.+++ ++. +++...+++ ++
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~----------~~~~~------~~~----------~~~~~~~~~~~~ 61 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSS----------DASKV------HAD----------WPAIPVVSDPQM 61 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS----------CHHHH------HTT----------CSSCCEESCHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECC----------CHHHH------Hhh----------CCCCceECCHHH
Confidence 68999999999986 67777765 7899999997 22232 111 123333322 44
Q ss_pred ccc-cccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHH---HHhCCcEEecc
Q 008128 494 PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDV---LKKANVLIAPA 553 (577)
Q Consensus 494 il~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~i---L~~rGI~viPD 553 (577)
++. .++|+++=|+ .+..+.+.+...++.+..+++|=-=.....+++++ .+++|+.+...
T Consensus 62 ll~~~~vD~V~i~t-p~~~H~~~~~~al~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~~~~v~ 124 (352)
T 3kux_A 62 LFNDPSIDLIVIPT-PNDTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLSVF 124 (352)
T ss_dssp HHHCSSCCEEEECS-CTTTHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHTTCCEEEC
T ss_pred HhcCCCCCEEEEeC-ChHHHHHHHHHHHHCCCcEEEECCCcCCHHHHHHHHHHHHHcCCeEEEE
Confidence 553 4789988777 66777888888888888899984211122344433 35677765543
No 127
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=95.15 E-value=0.15 Score=51.47 Aligned_cols=122 Identities=14% Similarity=0.165 Sum_probs=74.7
Q ss_pred chHHHHHHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcC
Q 008128 395 TGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQR 474 (577)
Q Consensus 395 TG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g 474 (577)
-|+|.+.++++ .+ ++++.|.|.|.+|+.++..|.+.|.+ |.|.+. +++ +...|.++ +
T Consensus 105 D~~Gf~~~L~~----~~----~k~vlvlGaGGaaraia~~L~~~G~~-v~V~nR-----t~~-----ka~~la~~----~ 161 (269)
T 3phh_A 105 DALGFYLSLKQ----KN----YQNALILGAGGSAKALACELKKQGLQ-VSVLNR-----SSR-----GLDFFQRL----G 161 (269)
T ss_dssp HHHHHHHHCC-----------CCEEEEECCSHHHHHHHHHHHHTTCE-EEEECS-----SCT-----THHHHHHH----T
T ss_pred hHHHHHHHHHH----cC----CCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeC-----CHH-----HHHHHHHC----C
Confidence 36777766654 22 89999999999999999999999965 677776 222 22222211 1
Q ss_pred cccccccccCCceEeCCCCccccccceeecCCccc-----ccchhhHhhhhccCceEEEecCCCCCCHHHHHHHHhCCcE
Q 008128 475 SLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQN-----EIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVL 549 (577)
Q Consensus 475 ~l~~y~~~~p~a~~i~~~eil~~~cDIlIPcA~~n-----~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI~ 549 (577)
.+..+.+++ . ++||+|-|..-. .++.+-....+. ...+|++-.-.|.|+ -.+.-+++|+.
T Consensus 162 -----------~~~~~~~~l-~-~~DiVInaTp~Gm~~~~~l~~~~l~~~l~-~~~~v~D~vY~P~T~-ll~~A~~~G~~ 226 (269)
T 3phh_A 162 -----------CDCFMEPPK-S-AFDLIINATSASLHNELPLNKEVLKGYFK-EGKLAYDLAYGFLTP-FLSLAKELKTP 226 (269)
T ss_dssp -----------CEEESSCCS-S-CCSEEEECCTTCCCCSCSSCHHHHHHHHH-HCSEEEESCCSSCCH-HHHHHHHTTCC
T ss_pred -----------CeEecHHHh-c-cCCEEEEcccCCCCCCCCCChHHHHhhCC-CCCEEEEeCCCCchH-HHHHHHHCcCE
Confidence 111222222 2 899999665432 344442221112 346889998888444 55666888987
Q ss_pred Eecch
Q 008128 550 IAPAM 554 (577)
Q Consensus 550 viPD~ 554 (577)
++++.
T Consensus 227 ~~~Gl 231 (269)
T 3phh_A 227 FQDGK 231 (269)
T ss_dssp EECSH
T ss_pred EECCH
Confidence 77664
No 128
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=95.14 E-value=0.081 Score=57.06 Aligned_cols=135 Identities=17% Similarity=0.083 Sum_probs=81.1
Q ss_pred HHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCC--eEEEEEc----CCCeeeCCCCCCHHhHhHHHHHHhhcC
Q 008128 401 FFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGA--IPVSVSD----AKGYLVDEDGFDYMKISFLRDIKSQQR 474 (577)
Q Consensus 401 ~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GA--kVVaISD----s~G~Iydp~GLD~e~L~~l~~~k~~~g 474 (577)
.++..+++..+.++++++|+|.|.|..|..++..|.+.|+ +=|.|.| ++|.++..+. .++| .+++..
T Consensus 171 aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~--~~~L---~~~~~~-- 243 (439)
T 2dvm_A 171 AGLLNALKVVGKKISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLD--LEKL---FPYRGW-- 243 (439)
T ss_dssp HHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSC--HHHH---STTCHH--
T ss_pred HHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccc--hhHH---HHHHHH--
Confidence 3445555666889999999999999999999999999998 4477888 8887655422 1112 111100
Q ss_pred cccccccccCCceEeCCCCccc--cccceeecCCcc--cccchhhHhhhhccCceEEEecCCCCCCHHHHHHHHhCCcEE
Q 008128 475 SLRDYSKTYARSKYYDEAKPWN--ERCDVAFPCASQ--NEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLI 550 (577)
Q Consensus 475 ~l~~y~~~~p~a~~i~~~eil~--~~cDIlIPcA~~--n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI~v 550 (577)
|....... ....++.+ ..+||+|=|+.. +.++.+..+.+. .-.+|..-+|-.-|+-.++. +++|..+
T Consensus 244 ----~a~~~~~~--~~~~~L~e~l~~aDVlInaT~~~~G~~~~e~v~~m~--~~~iVfDLynP~~t~~~~~A-~~~G~~i 314 (439)
T 2dvm_A 244 ----LLKKTNGE--NIEGGPQEALKDADVLISFTRPGPGVIKPQWIEKMN--EDAIVFPLANPVPEILPEEA-KKAGARI 314 (439)
T ss_dssp ----HHTTSCTT--CCCSSHHHHHTTCSEEEECSCCCSSSSCHHHHTTSC--TTCEEEECCSSSCSSCHHHH-HHHTCSE
T ss_pred ----Hhhccccc--cccccHHHHhccCCEEEEcCCCccCCCChHHHHhcC--CCCEEEECCCCCCcchHHHH-HHcCCeE
Confidence 00000000 00011111 358999999987 888877666552 33588888764334433332 2346544
Q ss_pred e
Q 008128 551 A 551 (577)
Q Consensus 551 i 551 (577)
+
T Consensus 315 v 315 (439)
T 2dvm_A 315 V 315 (439)
T ss_dssp E
T ss_pred E
Confidence 4
No 129
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=95.13 E-value=0.051 Score=55.03 Aligned_cols=109 Identities=16% Similarity=0.123 Sum_probs=68.5
Q ss_pred CceEEEEecchHHH-HHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC-CC
Q 008128 416 GLRCVVSGSGKIAM-HVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AK 493 (577)
Q Consensus 416 GkrVaIQGfGNVG~-~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~-~e 493 (577)
-.||.|.|+|++|. ..+..|...++++++|+|. +++- + .+..+.. ++....++ ++
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~-----~~~~-----~---~~~a~~~----------~~~~~~~~~~~ 60 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFES-----DSDN-----R---AKFTSLF----------PSVPFAASAEQ 60 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECS-----CTTS-----C---HHHHHHS----------TTCCBCSCHHH
T ss_pred ccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCC-----CHHH-----H---HHHHHhc----------CCCcccCCHHH
Confidence 36899999999996 4666676779999999997 3432 1 1122221 11221222 34
Q ss_pred ccc-cccceeecCCcccccchhhHhhhhccCceEEEecCCCCC--C-HHHHHHH---HhCCcEEe
Q 008128 494 PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC--T-PEAVDVL---KKANVLIA 551 (577)
Q Consensus 494 il~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~--T-~eA~~iL---~~rGI~vi 551 (577)
++. .++|+++-|+ .+..+.+.+...++.+..+++|= |+ | .++++++ +++|+.+.
T Consensus 61 ll~~~~~D~V~i~t-p~~~h~~~~~~al~aGkhVl~EK---P~a~~~~e~~~l~~~a~~~g~~~~ 121 (336)
T 2p2s_A 61 LITDASIDLIACAV-IPCDRAELALRTLDAGKDFFTAK---PPLTTLEQLDAVQRRVAETGRKFA 121 (336)
T ss_dssp HHTCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEECS---SCCSCHHHHHHHHHHHHHHCCCEE
T ss_pred HhhCCCCCEEEEeC-ChhhHHHHHHHHHHCCCcEEEeC---CCCCCHHHHHHHHHHHHHcCCEEE
Confidence 443 4789888776 45667777777777888889983 42 3 3444433 56677654
No 130
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=95.13 E-value=0.025 Score=58.22 Aligned_cols=110 Identities=9% Similarity=0.111 Sum_probs=71.1
Q ss_pred CceEEEEecchHHHH-HHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC-CC
Q 008128 416 GLRCVVSGSGKIAMH-VLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EA 492 (577)
Q Consensus 416 GkrVaIQGfGNVG~~-aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~-~~ 492 (577)
-.||.|.|+|++|.. .+..|.+. ++++++|+|.+ .+++ .+. +++...++ -+
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~----------~~~~------~~~----------~~~~~~~~~~~ 58 (358)
T 3gdo_A 5 TIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSR----------TEEV------KRD----------FPDAEVVHELE 58 (358)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSC----------HHHH------HHH----------CTTSEEESSTH
T ss_pred cceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCC----------HHHH------Hhh----------CCCCceECCHH
Confidence 368999999999985 66767654 78999999972 2221 111 12333332 24
Q ss_pred Cccc-cccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHH---HHhCCcEEec
Q 008128 493 KPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDV---LKKANVLIAP 552 (577)
Q Consensus 493 eil~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~i---L~~rGI~viP 552 (577)
+++. .++|+++-|+ .+..+.+.+...++.+..+++|=-=.....+++++ .+++|+.+..
T Consensus 59 ~ll~~~~vD~V~i~t-p~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v 121 (358)
T 3gdo_A 59 EITNDPAIELVIVTT-PSGLHYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLSV 121 (358)
T ss_dssp HHHTCTTCCEEEECS-CTTTHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred HHhcCCCCCEEEEcC-CcHHHHHHHHHHHHcCCeEEEecCCcCCHHHHHHHHHHHHHcCCeEEE
Confidence 4553 5799999877 56678888888888899999984211122445443 3566776553
No 131
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=95.13 E-value=0.08 Score=53.63 Aligned_cols=110 Identities=15% Similarity=0.170 Sum_probs=73.6
Q ss_pred ceEEEEec-chHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC-CCc
Q 008128 417 LRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKP 494 (577)
Q Consensus 417 krVaIQGf-GNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~-~ei 494 (577)
+||.|.|+ |.+|..-++.|.+.+.++++|+|. +++- ..+ .+.+++.+.+++ +++
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~-----~~~~---~~~----------------~~~~~~~~~~~~~~~l 59 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDP-----ATNV---GLV----------------DSFFPEAEFFTEPEAF 59 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECS-----SCCC---GGG----------------GGTCTTCEEESCHHHH
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcC-----CHHH---HHH----------------HhhCCCCceeCCHHHH
Confidence 58999999 789999999999899999999997 3331 010 112234444433 344
Q ss_pred c---------ccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHH---HhCCcEEe
Q 008128 495 W---------NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVL---KKANVLIA 551 (577)
Q Consensus 495 l---------~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL---~~rGI~vi 551 (577)
+ +.++|+++=|+ .+..+.+.+...++.+..++||=-=.....|+++++ +++|+.+.
T Consensus 60 l~~~~~l~~~~~~vD~V~I~t-P~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 127 (312)
T 3o9z_A 60 EAYLEDLRDRGEGVDYLSIAS-PNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGRRVY 127 (312)
T ss_dssp HHHHHHHHHTTCCCSEEEECS-CGGGHHHHHHHHHHTTCEEEECSSSCSCHHHHHHHHHHHHHHCCCEE
T ss_pred HHHhhhhcccCCCCcEEEECC-CchhhHHHHHHHHHCCCeEEEECCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 4 35789888665 567788888888888999999942222334555443 56677553
No 132
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=95.11 E-value=0.033 Score=56.29 Aligned_cols=129 Identities=11% Similarity=0.125 Sum_probs=74.9
Q ss_pred chHHHHHHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcC
Q 008128 395 TGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQR 474 (577)
Q Consensus 395 TG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g 474 (577)
-|+|.+.+++ ..+.+++|++++|.|.|.+|+.++..|.+.|++-|.|.+.+ + ++...+. .
T Consensus 100 D~~G~~~~L~----~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~-----~-----~~a~~la------~ 159 (277)
T 3don_A 100 DGIGYVNGLK----QIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRT-----M-----SRFNNWS------L 159 (277)
T ss_dssp HHHHHHHHHH----HHSTTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSC-----G-----GGGTTCC------S
T ss_pred hHHHHHHHHH----HhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC-----H-----HHHHHHH------H
Confidence 4677766654 45778999999999999999999999999999546777762 1 1110000 0
Q ss_pred cccccccccCCceEeCCCCccccccceeecCCcccccchh----hHhhhhccCceEEEecCCCCC-CHHHHHHHHhCCcE
Q 008128 475 SLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQS----DAINLVNSGCRILVEGSNMPC-TPEAVDVLKKANVL 549 (577)
Q Consensus 475 ~l~~y~~~~p~a~~i~~~eil~~~cDIlIPcA~~n~It~e----nA~~l~~~~akiVvEgAN~p~-T~eA~~iL~~rGI~ 549 (577)
.+. ....+.-.-+-.++||+|-|..-..-... ....+ + ...+|++-.-.|. |+ -.+..+++|+.
T Consensus 160 ~~~--------~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~~l~~~~l-~-~~~~V~D~vY~P~~T~-ll~~A~~~G~~ 228 (277)
T 3don_A 160 NIN--------KINLSHAESHLDEFDIIINTTPAGMNGNTDSVISLNRL-A-SHTLVSDIVYNPYKTP-ILIEAEQRGNP 228 (277)
T ss_dssp CCE--------EECHHHHHHTGGGCSEEEECCC-------CCSSCCTTC-C-SSCEEEESCCSSSSCH-HHHHHHHTTCC
T ss_pred hcc--------cccHhhHHHHhcCCCEEEECccCCCCCCCcCCCCHHHc-C-CCCEEEEecCCCCCCH-HHHHHHHCcCE
Confidence 000 00011000012468999877543211110 11222 1 3568899886784 54 44556888987
Q ss_pred Eecch
Q 008128 550 IAPAM 554 (577)
Q Consensus 550 viPD~ 554 (577)
++++.
T Consensus 229 ~~~Gl 233 (277)
T 3don_A 229 IYNGL 233 (277)
T ss_dssp EECTH
T ss_pred EeCCH
Confidence 76654
No 133
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=95.11 E-value=0.098 Score=47.28 Aligned_cols=115 Identities=19% Similarity=0.119 Sum_probs=68.0
Q ss_pred CCCceEEEEec----chHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEe
Q 008128 414 LKGLRCVVSGS----GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (577)
Q Consensus 414 l~GkrVaIQGf----GNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i 489 (577)
++-++|+|+|. |++|...++.|.+.|.+|..+ ||++ +++ ..+.- |+..
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~v--------np~~---~~i----------~G~~~----~~s~--- 63 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPV--------NPNY---DEI----------EGLKC----YRSV--- 63 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEE--------CTTC---SEE----------TTEEC----BSSG---
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEe--------CCCC---CeE----------CCeee----cCCH---
Confidence 34579999999 999999999999999984433 3332 110 01111 1111
Q ss_pred CCCCccccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHHHhCCcEEecchhccccceeeh
Q 008128 490 DEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVRYS 564 (577)
Q Consensus 490 ~~~eil~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI~viPD~~aNAGGVivS 564 (577)
+++- .++|+++-|... ....+.+..+++.+++.|+.-+ .-.+.+..+..+++|+.++= -|+=|++..
T Consensus 64 --~el~-~~vDlvii~vp~-~~v~~v~~~~~~~g~~~i~~~~-~~~~~~l~~~a~~~Gi~~ig---pnc~g~~~~ 130 (138)
T 1y81_A 64 --RELP-KDVDVIVFVVPP-KVGLQVAKEAVEAGFKKLWFQP-GAESEEIRRFLEKAGVEYSF---GRCIMVETS 130 (138)
T ss_dssp --GGSC-TTCCEEEECSCH-HHHHHHHHHHHHTTCCEEEECT-TSCCHHHHHHHHHHTCEEEC---SCCHHHHC-
T ss_pred --HHhC-CCCCEEEEEeCH-HHHHHHHHHHHHcCCCEEEEcC-ccHHHHHHHHHHHCCCEEEc---CCcceEEcc
Confidence 1111 257887776653 4444555555555776665433 12467888889999998762 255555544
No 134
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=95.10 E-value=0.076 Score=54.29 Aligned_cols=37 Identities=27% Similarity=0.428 Sum_probs=32.1
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++ .|.
T Consensus 139 ~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~-~d~ 175 (311)
T 2cuk_A 139 GLDLQGLTLGLVGMGRIGQAVAKRALAFGMRVVY-HAR 175 (311)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEE-ECS
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHCCCEEEE-ECC
Confidence 3578999999999999999999999999999654 444
No 135
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.08 E-value=0.066 Score=56.17 Aligned_cols=105 Identities=16% Similarity=0.276 Sum_probs=64.6
Q ss_pred ceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccc------cCC--ce
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT------YAR--SK 487 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~------~p~--a~ 487 (577)
.+|+|.|||-+|+.+++.|.+. ...||+|.|.. .|.+.+..++++....+.+....+. +.+ .+
T Consensus 18 ikVgI~G~G~iGr~llR~l~~~p~veivaindp~--------~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~ 89 (354)
T 3cps_A 18 GTLGINGFGRIGRLVLRACMERNDITVVAINDPF--------MDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVK 89 (354)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTT--------SCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCC--------CChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEE
Confidence 4999999999999999999876 68999999831 1333322233333333333221100 000 11
Q ss_pred Ee---CCCC-cc-ccccceeecCCcccccchhhHhhhhccCce-EEEec
Q 008128 488 YY---DEAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVEG 530 (577)
Q Consensus 488 ~i---~~~e-il-~~~cDIlIPcA~~n~It~enA~~l~~~~ak-iVvEg 530 (577)
.+ ++++ .| +..|||++.|+ +.-.+.+.|+..++.||| +|+.+
T Consensus 90 v~~~~dp~~i~w~~~~vDvV~eat-g~~~s~e~a~~~l~~GakkvVId~ 137 (354)
T 3cps_A 90 VFQAKDPAEIPWGASGAQIVCEST-GVFTTEEKASLHLKGGAKKVIISA 137 (354)
T ss_dssp EECCSCGGGCCHHHHTCCEEEECS-SSCCSHHHHGGGGTTTCSEEEESS
T ss_pred EEecCChHHCCcccCCCCEEEECC-CchhhHHHHHHHHHcCCcEEEEeC
Confidence 22 1222 25 36899999986 455678889888888884 55544
No 136
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=95.06 E-value=0.05 Score=54.84 Aligned_cols=111 Identities=15% Similarity=0.193 Sum_probs=68.2
Q ss_pred ceEEEEecchHHH-HHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCc
Q 008128 417 LRCVVSGSGKIAM-HVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKP 494 (577)
Q Consensus 417 krVaIQGfGNVG~-~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~ei 494 (577)
.||.|.|+|++|. ..++.|.+. +.+++ |+|. +.+++ .+..+..+ +.. .+.+..+.
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~-v~d~----------~~~~~---~~~a~~~g-~~~--------~~~~~~~~ 59 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELV-LCTR----------NPKVL---GTLATRYR-VSA--------TCTDYRDV 59 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEE-EECS----------CHHHH---HHHHHHTT-CCC--------CCSSTTGG
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEE-EEeC----------CHHHH---HHHHHHcC-CCc--------cccCHHHH
Confidence 4899999999998 477877764 77888 9987 33343 22222222 110 01223334
Q ss_pred cccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCC-HHHH---HHHHhCCcEEec
Q 008128 495 WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCT-PEAV---DVLKKANVLIAP 552 (577)
Q Consensus 495 l~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T-~eA~---~iL~~rGI~viP 552 (577)
+..++|+++-|.. +....+.+...++.+..+++|-- +.+| .+++ +..+++|+.+..
T Consensus 60 l~~~~D~V~i~tp-~~~h~~~~~~al~~Gk~V~~EKP-~~~~~~~~~~l~~~a~~~g~~~~v 119 (323)
T 1xea_A 60 LQYGVDAVMIHAA-TDVHSTLAAFFLHLGIPTFVDKP-LAASAQECENLYELAEKHHQPLYV 119 (323)
T ss_dssp GGGCCSEEEECSC-GGGHHHHHHHHHHTTCCEEEESC-SCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred hhcCCCEEEEECC-chhHHHHHHHHHHCCCeEEEeCC-CcCCHHHHHHHHHHHHhcCCeEEE
Confidence 4568999998875 55667777777777888999841 1133 3444 334567876654
No 137
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=95.05 E-value=0.067 Score=54.60 Aligned_cols=111 Identities=15% Similarity=0.234 Sum_probs=71.6
Q ss_pred CceEEEEecchHHHHHHHHHHHC--CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC-C
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAY--GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-A 492 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~--GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~-~ 492 (577)
-.||.|.|+|++|...++.|.+. +..+++|+|. |.+++ .+..+..+ ....++ +
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~----------~~~~~---~~~~~~~~-----------~~~~~~~~ 68 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDI----------DPAAL---KAAVERTG-----------ARGHASLT 68 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECS----------SHHHH---HHHHHHHC-----------CEEESCHH
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcC----------CHHHH---HHHHHHcC-----------CceeCCHH
Confidence 36899999999999988888876 7899999997 33333 22222211 122222 3
Q ss_pred Cccc-cccceeecCCcccccchhhHhhhhccCceEEEecCCCCCC-HHHHH---HHHhCCcEEec
Q 008128 493 KPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCT-PEAVD---VLKKANVLIAP 552 (577)
Q Consensus 493 eil~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T-~eA~~---iL~~rGI~viP 552 (577)
+++. .++|+++-|.. +..+.+.+...++.+..+++|=- +-+| .++++ ..+++|+.+..
T Consensus 69 ~ll~~~~~D~V~i~tp-~~~h~~~~~~al~~gk~v~~EKP-~a~~~~~~~~l~~~a~~~g~~~~v 131 (354)
T 3q2i_A 69 DMLAQTDADIVILTTP-SGLHPTQSIECSEAGFHVMTEKP-MATRWEDGLEMVKAADKAKKHLFV 131 (354)
T ss_dssp HHHHHCCCSEEEECSC-GGGHHHHHHHHHHTTCEEEECSS-SCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred HHhcCCCCCEEEECCC-cHHHHHHHHHHHHCCCCEEEeCC-CcCCHHHHHHHHHHHHHhCCeEEE
Confidence 4553 57899887664 55677777777888889999852 1123 34443 33566776643
No 138
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=95.04 E-value=0.083 Score=53.44 Aligned_cols=108 Identities=13% Similarity=0.075 Sum_probs=62.7
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCccc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWN 496 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil~ 496 (577)
+||.+.|.|++|...|+.|.+.|..| .+.|. +++ ++. .+.. -+++..+.-.-.-
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V-~v~dr-----~~~-----~~~----------~l~~-----~G~~~~~s~~e~~ 59 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYEL-VVWNR-----TAS-----KAE----------PLTK-----LGATVVENAIDAI 59 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEE-EEC-----------------C----------TTTT-----TTCEECSSGGGGC
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeE-EEEeC-----CHH-----HHH----------HHHH-----cCCeEeCCHHHHH
Confidence 58999999999999999999999995 45554 222 210 1111 1333332211123
Q ss_pred cccceeecCCccc-----ccchhhHhhhhccCceEEEecCCCC--CCHHHHHHHHhCCcEEec
Q 008128 497 ERCDVAFPCASQN-----EIDQSDAINLVNSGCRILVEGSNMP--CTPEAVDVLKKANVLIAP 552 (577)
Q Consensus 497 ~~cDIlIPcA~~n-----~It~enA~~l~~~~akiVvEgAN~p--~T~eA~~iL~~rGI~viP 552 (577)
.+|||+|-|-... .+..+-+..+ + .-.+|+...+.. +|.+..+.+.++|+.|+=
T Consensus 60 ~~~dvvi~~l~~~~~~~~v~~~~~~~~~-~-~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ld 120 (297)
T 4gbj_A 60 TPGGIVFSVLADDAAVEELFSMELVEKL-G-KDGVHVSMSTISPETSRQLAQVHEWYGAHYVG 120 (297)
T ss_dssp CTTCEEEECCSSHHHHHHHSCHHHHHHH-C-TTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred hcCCceeeeccchhhHHHHHHHHHHhhc-C-CCeEEEECCCCChHHHHHHHHHHHhcCCceec
Confidence 4789988775533 2223333333 2 234666666544 455667889999998873
No 139
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=95.04 E-value=0.1 Score=54.31 Aligned_cols=106 Identities=16% Similarity=0.178 Sum_probs=68.5
Q ss_pred ceEEEEecchHHHHHHHHHHHC---CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCccccccc-----c--cCCc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY---GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK-----T--YARS 486 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~---GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~-----~--~p~a 486 (577)
.+|+|.|||-+|+.+++.|.+. ...|++|.|. .|.+.+..|.++....|....-+. . +.+.
T Consensus 2 ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~---------~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~ 72 (337)
T 1rm4_O 2 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDT---------GGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGK 72 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECT---------TCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTE
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcC---------CCHHHHHHHhcccccCCCccceeEEecCCeEEECCe
Confidence 4799999999999999999876 4688999883 255555445544333333211000 0 1111
Q ss_pred --eEeCC---CCc-c-ccccceeecCCcccccchhhHhhhhccCceEEEecCC
Q 008128 487 --KYYDE---AKP-W-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (577)
Q Consensus 487 --~~i~~---~ei-l-~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (577)
..... .++ | +..|||++.|+ +.-.+.+.|+..++.|||.|.=.|-
T Consensus 73 ~i~v~~~~dp~~i~w~~~gvDiV~eat-g~~~s~e~a~~~l~~Gak~V~iSap 124 (337)
T 1rm4_O 73 VIKVVSDRNPVNLPWGDMGIDLVIEGT-GVFVDRDGAGKHLQAGAKKVLITAP 124 (337)
T ss_dssp EEEEECCSCGGGSCHHHHTCCEEEECS-SSCCBHHHHHHHHHTTCSEEEESSC
T ss_pred EEEEEecCChhhCcccccCCCEEEECC-CchhhHHHHHHHHHcCCEEEEECCc
Confidence 11122 222 5 35899999986 5566788888888889998887664
No 140
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=95.04 E-value=0.04 Score=56.83 Aligned_cols=114 Identities=13% Similarity=0.131 Sum_probs=72.4
Q ss_pred CceEEEEecchHHH-HHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC-CCC
Q 008128 416 GLRCVVSGSGKIAM-HVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAK 493 (577)
Q Consensus 416 GkrVaIQGfGNVG~-~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~-~~e 493 (577)
-.||.|.|+|.++. ..+..+...++++++|+|. |.++. .+..+..+ ....++ -++
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~----------~~~~a---~~~a~~~~----------~~~~~~~~~~ 82 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEK----------DDALA---AEFSAVYA----------DARRIATAEE 82 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECS----------CHHHH---HHHHHHSS----------SCCEESCHHH
T ss_pred CcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcC----------CHHHH---HHHHHHcC----------CCcccCCHHH
Confidence 46999999999985 4566677789999999997 33333 22222222 122222 244
Q ss_pred ccc-cccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHH---HhCCcEEecc
Q 008128 494 PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVL---KKANVLIAPA 553 (577)
Q Consensus 494 il~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL---~~rGI~viPD 553 (577)
++. .++|+++=|+ .+..+.+.+...++.|..++||=-=.....|+++++ +++|+.+...
T Consensus 83 ll~~~~vD~V~I~t-p~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~v~ 145 (361)
T 3u3x_A 83 ILEDENIGLIVSAA-VSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIFSIL 145 (361)
T ss_dssp HHTCTTCCEEEECC-CHHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCEEEE
T ss_pred HhcCCCCCEEEEeC-ChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 554 4689998554 566788888888888999999952111234555443 5667765433
No 141
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=95.03 E-value=0.098 Score=56.01 Aligned_cols=106 Identities=18% Similarity=0.195 Sum_probs=63.8
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~ 490 (577)
+.++.|+|+.|.|+|++|+.+|+.|...|.+|++ .|.+... .. .++....
T Consensus 151 ~~el~gktvGIIGlG~IG~~vA~~l~~~G~~V~~-yd~~~~~----------------------~~-------~~~~~~~ 200 (416)
T 3k5p_A 151 SREVRGKTLGIVGYGNIGSQVGNLAESLGMTVRY-YDTSDKL----------------------QY-------GNVKPAA 200 (416)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEE-ECTTCCC----------------------CB-------TTBEECS
T ss_pred CccCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEE-ECCcchh----------------------cc-------cCcEecC
Confidence 3579999999999999999999999999999764 3432100 00 0111111
Q ss_pred C-CCccccccceeecCCc-----ccccchhhHhhhhccCceEEEecCCCCC-CHHH-HHHHHhCCcE
Q 008128 491 E-AKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMPC-TPEA-VDVLKKANVL 549 (577)
Q Consensus 491 ~-~eil~~~cDIlIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~p~-T~eA-~~iL~~rGI~ 549 (577)
. +++ -..||+++-|.. .+.|+.+....+ +.++ +++.-|-+++ ..+| .+.|++..|.
T Consensus 201 sl~el-l~~aDvV~lhvPlt~~T~~li~~~~l~~m-k~ga-ilIN~aRG~vvd~~aL~~aL~~g~i~ 264 (416)
T 3k5p_A 201 SLDEL-LKTSDVVSLHVPSSKSTSKLITEAKLRKM-KKGA-FLINNARGSDVDLEALAKVLQEGHLA 264 (416)
T ss_dssp SHHHH-HHHCSEEEECCCC-----CCBCHHHHHHS-CTTE-EEEECSCTTSBCHHHHHHHHHTTSEE
T ss_pred CHHHH-HhhCCEEEEeCCCCHHHhhhcCHHHHhhC-CCCc-EEEECCCChhhhHHHHHHHHHcCCcc
Confidence 1 111 236788776543 366766665555 3333 6666666663 4444 4667666553
No 142
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=95.03 E-value=0.41 Score=49.32 Aligned_cols=53 Identities=28% Similarity=0.351 Sum_probs=44.2
Q ss_pred CCCcchHHHHHHHHHHHHHcCCCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 391 RTEATGYGLVFFAQLILADMNKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 391 r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
-...|-+|+.. +|++.+.+++||+++|.| +.-||.-+|.+|.+.+|+ |+++.+
T Consensus 158 ~~PcTp~gv~~----lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~AT-VTi~Hs 211 (303)
T 4b4u_A 158 YGSATPAGIMT----ILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQANAT-VTICHS 211 (303)
T ss_dssp CCCHHHHHHHH----HHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE-EEEECT
T ss_pred ccCccHHHHHH----HHHHHCCCCCCCEEEEEeccccccchHHHHHHhcCCE-EEEecC
Confidence 34688888764 556779999999999999 677899999999999999 677766
No 143
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=94.98 E-value=0.05 Score=56.04 Aligned_cols=114 Identities=14% Similarity=0.192 Sum_probs=71.7
Q ss_pred CCceEEEEecchHHH-HHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC-
Q 008128 415 KGLRCVVSGSGKIAM-HVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE- 491 (577)
Q Consensus 415 ~GkrVaIQGfGNVG~-~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~- 491 (577)
+-.||.|.|+|++|. +.++.|.+. ++++++|+|. |.+++ .+. .+.++....+++
T Consensus 4 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~----------~~~~~---~~~----------a~~~~~~~~~~~~ 60 (359)
T 3m2t_A 4 SLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDS----------DLERA---RRV----------HRFISDIPVLDNV 60 (359)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECS----------SHHHH---GGG----------GGTSCSCCEESSH
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcC----------CHHHH---HHH----------HHhcCCCcccCCH
Confidence 446999999999998 478888775 7899999997 22232 111 112233333332
Q ss_pred CCccc-cccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHH---HHhCCcEEec
Q 008128 492 AKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDV---LKKANVLIAP 552 (577)
Q Consensus 492 ~eil~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~i---L~~rGI~viP 552 (577)
++++. .++|+++=|. .+..+.+.+...++.+..++||=-=.....+++++ .+++|+.+.-
T Consensus 61 ~~ll~~~~vD~V~i~t-p~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v 124 (359)
T 3m2t_A 61 PAMLNQVPLDAVVMAG-PPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGV 124 (359)
T ss_dssp HHHHHHSCCSEEEECS-CHHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHhcCCCCCEEEEcC-CcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 44553 4689998765 46667788888888899999984111122345443 3566775543
No 144
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=94.96 E-value=0.073 Score=54.34 Aligned_cols=114 Identities=13% Similarity=0.041 Sum_probs=71.9
Q ss_pred CceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCc
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKP 494 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~ei 494 (577)
-.||.|.|+|++|...++.|.+. +.++++|+|. |.+++ .+..+..+ +..| -+.+++
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~----------~~~~~---~~~~~~~g-~~~~---------~~~~~~ 61 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSR----------TEDKR---EKFGKRYN-CAGD---------ATMEAL 61 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECS----------SHHHH---HHHHHHHT-CCCC---------SSHHHH
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECC----------CHHHH---HHHHHHcC-CCCc---------CCHHHH
Confidence 36899999999999999988876 8999999997 33333 22222111 1111 112344
Q ss_pred c-ccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHH---HHhCCcEEecc
Q 008128 495 W-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDV---LKKANVLIAPA 553 (577)
Q Consensus 495 l-~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~i---L~~rGI~viPD 553 (577)
+ +.++|+++-|. .+..+.+.+...++.+..+++|=-=.....+++++ .+++|+.+...
T Consensus 62 l~~~~~D~V~i~t-p~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~ 123 (354)
T 3db2_A 62 LAREDVEMVIITV-PNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCG 123 (354)
T ss_dssp HHCSSCCEEEECS-CTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEE
T ss_pred hcCCCCCEEEEeC-ChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEe
Confidence 4 35789988765 45667777887888888899985211122344433 35667765543
No 145
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=94.92 E-value=0.063 Score=55.86 Aligned_cols=37 Identities=24% Similarity=0.249 Sum_probs=32.6
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
+.++.|+||.|.|+|++|+.+|+.|...|.+|+ +.|.
T Consensus 166 ~~~l~gktiGIIGlG~IG~~vA~~l~~~G~~V~-~~dr 202 (340)
T 4dgs_A 166 GHSPKGKRIGVLGLGQIGRALASRAEAFGMSVR-YWNR 202 (340)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EECS
T ss_pred cccccCCEEEEECCCHHHHHHHHHHHHCCCEEE-EEcC
Confidence 568999999999999999999999999999965 4454
No 146
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=94.92 E-value=0.18 Score=45.63 Aligned_cols=104 Identities=13% Similarity=0.123 Sum_probs=64.8
Q ss_pred CceEEEEec----chHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC
Q 008128 416 GLRCVVSGS----GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (577)
Q Consensus 416 GkrVaIQGf----GNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~ 491 (577)
-++|+|+|. |++|..+++.|.+.|.+|..| ||.+ +++ ..+.- |+..
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~V--------np~~---~~i----------~G~~~----y~sl----- 71 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPV--------NPKY---EEV----------LGRKC----YPSV----- 71 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEE--------CTTC---SEE----------TTEEC----BSSG-----
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEE--------CCCC---CeE----------CCeec----cCCH-----
Confidence 468999999 799999999999999986554 3332 011 01111 1211
Q ss_pred CCccccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHHHhCCcEEe-c
Q 008128 492 AKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIA-P 552 (577)
Q Consensus 492 ~eil~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI~vi-P 552 (577)
+++ ..++|+++-|... ....+.++.+++.+++.|+--.. ....+..+..+++|+.++ |
T Consensus 72 ~~l-~~~vDlvvi~vp~-~~~~~vv~~~~~~gi~~i~~~~g-~~~~~l~~~a~~~Gi~vvGp 130 (144)
T 2d59_A 72 LDI-PDKIEVVDLFVKP-KLTMEYVEQAIKKGAKVVWFQYN-TYNREASKKADEAGLIIVAN 130 (144)
T ss_dssp GGC-SSCCSEEEECSCH-HHHHHHHHHHHHHTCSEEEECTT-CCCHHHHHHHHHTTCEEEES
T ss_pred HHc-CCCCCEEEEEeCH-HHHHHHHHHHHHcCCCEEEECCC-chHHHHHHHHHHcCCEEEcC
Confidence 111 1257777766543 33445555555557777775432 247788899999999887 5
No 147
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=94.87 E-value=0.089 Score=53.93 Aligned_cols=115 Identities=14% Similarity=0.118 Sum_probs=73.2
Q ss_pred CCceEEEEecchHHH-HHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCC
Q 008128 415 KGLRCVVSGSGKIAM-HVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEA 492 (577)
Q Consensus 415 ~GkrVaIQGfGNVG~-~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~ 492 (577)
+-.||.|.|+|++|. ..++.|.+. +.++++|+|. |.+++ .+..+..+ +. .+-+-+
T Consensus 26 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~----------~~~~~---~~~a~~~g-~~---------~~~~~~ 82 (350)
T 3rc1_A 26 NPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASR----------RWDRA---KRFTERFG-GE---------PVEGYP 82 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEES----------SHHHH---HHHHHHHC-SE---------EEESHH
T ss_pred CceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcC----------CHHHH---HHHHHHcC-CC---------CcCCHH
Confidence 346999999999998 678888776 7899999997 23333 22222111 11 111223
Q ss_pred Ccc-ccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHH---HHHhCCcEEecc
Q 008128 493 KPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVD---VLKKANVLIAPA 553 (577)
Q Consensus 493 eil-~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~---iL~~rGI~viPD 553 (577)
+++ +.++|+++=|. .+..+.+.+...++.+..++||=-=.....|+++ ..+++|+.+...
T Consensus 83 ~ll~~~~~D~V~i~t-p~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~ 146 (350)
T 3rc1_A 83 ALLERDDVDAVYVPL-PAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMEN 146 (350)
T ss_dssp HHHTCTTCSEEEECC-CGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHhcCCCCCEEEECC-CcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEE
Confidence 455 34789988765 5667788888888889999999521112244543 346778766544
No 148
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=94.87 E-value=0.066 Score=55.63 Aligned_cols=102 Identities=17% Similarity=0.257 Sum_probs=64.9
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCccccccc----c--cCC--ceE
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK----T--YAR--SKY 488 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~----~--~p~--a~~ 488 (577)
.+|+|.|||-+|+.+++.|.+....|++|.|. .|++-+..|.++....|.+..... . +.+ .+.
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~~~evvaind~---------~~~~~~a~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v 71 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSRGVEVALINDL---------TDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRA 71 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECS---------SCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCEEEEEecC---------CCHHHHhHhhhccccCCCCCceEEEcCCEEEECCEEEEE
Confidence 37999999999999999988778899999884 255555455544333443221110 0 011 111
Q ss_pred e---CCCC-ccc-cccceeecCCcccccchhhHhhhhccCce-EEE
Q 008128 489 Y---DEAK-PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCR-ILV 528 (577)
Q Consensus 489 i---~~~e-il~-~~cDIlIPcA~~n~It~enA~~l~~~~ak-iVv 528 (577)
. ++++ .|. ..|||++.|+ +.-.+.+.|+..++.||| +|+
T Consensus 72 ~~~~dp~~l~w~~~gvDiV~est-G~~~s~e~a~~~l~aGakkvVI 116 (331)
T 2g82_O 72 TAVKDPKEIPWAEAGVGVVIEST-GVFTDADKAKAHLEGGAKKVII 116 (331)
T ss_dssp ECCSSGGGSCTTTTTEEEEEECS-SSCCBHHHHTHHHHTTCSEEEE
T ss_pred EecCChhhCcccccCCCEEEECC-CchhhHHHHHHHHHCCCCEEEE
Confidence 1 1222 253 5799999986 566788888888888883 444
No 149
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=94.85 E-value=0.082 Score=53.42 Aligned_cols=113 Identities=19% Similarity=0.255 Sum_probs=70.1
Q ss_pred CceEEEEecchHHHHHHHHHH-H-CCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC-C
Q 008128 416 GLRCVVSGSGKIAMHVLEKLI-A-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-A 492 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~-e-~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~-~ 492 (577)
-.+|.|.|+|++|...++.|. + .++++++|+|. +.+++ .+..+..+. ...+++ +
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~----------~~~~~---~~~a~~~g~----------~~~~~~~~ 64 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACAL----------DSNQL---EWAKNELGV----------ETTYTNYK 64 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECS----------CHHHH---HHHHHTTCC----------SEEESCHH
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecC----------CHHHH---HHHHHHhCC----------CcccCCHH
Confidence 368999999999999888887 5 47899999997 23333 222222111 011221 3
Q ss_pred Cccc-cccceeecCCcccccchhhHhhhhccCceEEEecCCCCCC-HHHHHHH---HhC-CcEEecc
Q 008128 493 KPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCT-PEAVDVL---KKA-NVLIAPA 553 (577)
Q Consensus 493 eil~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T-~eA~~iL---~~r-GI~viPD 553 (577)
+++. .++|+++-|+. +..+.+.+...++.+..+++|-- +.+| .+++++. +++ |+.+...
T Consensus 65 ~~l~~~~~D~V~i~tp-~~~h~~~~~~al~~G~~v~~eKp-~~~~~~~~~~l~~~a~~~~~~~~~~~ 129 (346)
T 3cea_A 65 DMIDTENIDAIFIVAP-TPFHPEMTIYAMNAGLNVFCEKP-LGLDFNEVDEMAKVIKSHPNQIFQSG 129 (346)
T ss_dssp HHHTTSCCSEEEECSC-GGGHHHHHHHHHHTTCEEEECSC-CCSCHHHHHHHHHHHHTCTTSCEECC
T ss_pred HHhcCCCCCEEEEeCC-hHhHHHHHHHHHHCCCEEEEcCC-CCCCHHHHHHHHHHHHhCCCCeEEEe
Confidence 3443 47899998764 55667777777777888888741 1123 3444433 566 7766543
No 150
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=94.82 E-value=0.031 Score=56.06 Aligned_cols=106 Identities=15% Similarity=0.150 Sum_probs=63.6
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC-CCCcc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAKPW 495 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~-~~eil 495 (577)
++|.|.|+|++|...|+.|.+.|..| .+.|. +++-+ ..+. +. +++..+ .+++.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V-~~~dr-----~~~~~-----~~~~---~~------------g~~~~~~~~~~~ 69 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGV-TVYDI-----RIEAM-----TPLA---EA------------GATLADSVADVA 69 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCE-EEECS-----STTTS-----HHHH---HT------------TCEECSSHHHHT
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeE-EEEeC-----CHHHH-----HHHH---HC------------CCEEcCCHHHHH
Confidence 68999999999999999999999985 45565 34322 1112 11 122221 12333
Q ss_pred ccccceeecCCcccccchhhHhhhh---ccCceEEEecCCCC-C-CHHHHHHHHhCCcEEe
Q 008128 496 NERCDVAFPCASQNEIDQSDAINLV---NSGCRILVEGSNMP-C-TPEAVDVLKKANVLIA 551 (577)
Q Consensus 496 ~~~cDIlIPcA~~n~It~enA~~l~---~~~akiVvEgAN~p-~-T~eA~~iL~~rGI~vi 551 (577)
. ||++|-|........+....+. +.+ ++|+..++.+ . +.+..+.+.++|+.++
T Consensus 70 ~--aDvvi~~vp~~~~~~~v~~~l~~~l~~g-~ivv~~st~~~~~~~~~~~~~~~~g~~~~ 127 (296)
T 3qha_A 70 A--ADLIHITVLDDAQVREVVGELAGHAKPG-TVIAIHSTISDTTAVELARDLKARDIHIV 127 (296)
T ss_dssp T--SSEEEECCSSHHHHHHHHHHHHTTCCTT-CEEEECSCCCHHHHHHHHHHHGGGTCEEE
T ss_pred h--CCEEEEECCChHHHHHHHHHHHHhcCCC-CEEEEeCCCCHHHHHHHHHHHHHcCCEEE
Confidence 4 9999998875433333333332 234 4555555543 2 3344577788898876
No 151
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=94.80 E-value=0.13 Score=52.72 Aligned_cols=113 Identities=17% Similarity=0.166 Sum_probs=71.5
Q ss_pred CCCceEEEEecchHHHHHHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC-
Q 008128 414 LKGLRCVVSGSGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE- 491 (577)
Q Consensus 414 l~GkrVaIQGfGNVG~~aA~~L~e-~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~- 491 (577)
...+++.|.|.|..|...++.|.+ .+.+.|.|.|. +.++...+.+.....+ + ... .+.
T Consensus 123 ~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r----------~~~~a~~la~~~~~~~-~--------~~~-~~~~ 182 (322)
T 1omo_A 123 KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDV----------REKAAKKFVSYCEDRG-I--------SAS-VQPA 182 (322)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECS----------SHHHHHHHHHHHHHTT-C--------CEE-ECCH
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECC----------CHHHHHHHHHHHHhcC-c--------eEE-ECCH
Confidence 367899999999999999998887 46777888886 3444433332211111 1 112 221
Q ss_pred CCccccccceeecCCccc--ccchhhHhhhhccCceEEEecCCCCCCHHHHHHHHhCCcEEec
Q 008128 492 AKPWNERCDVAFPCASQN--EIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAP 552 (577)
Q Consensus 492 ~eil~~~cDIlIPcA~~n--~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI~viP 552 (577)
++.. +|||++-|+... .++. ..++.++.++++|+..|...|.+..+.+++.+|+=
T Consensus 183 ~e~v--~aDvVi~aTp~~~pv~~~----~~l~~G~~V~~ig~~~p~~~el~~~~~~~a~v~vD 239 (322)
T 1omo_A 183 EEAS--RCDVLVTTTPSRKPVVKA----EWVEEGTHINAIGADGPGKQELDVEILKKAKIVVD 239 (322)
T ss_dssp HHHT--SSSEEEECCCCSSCCBCG----GGCCTTCEEEECSCCSTTCCCBCHHHHHTEEEEES
T ss_pred HHHh--CCCEEEEeeCCCCceecH----HHcCCCeEEEECCCCCCCccccCHHHHhcCeEEEC
Confidence 2333 799999988743 2222 23456899999999999766665455566655553
No 152
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=94.78 E-value=0.038 Score=55.83 Aligned_cols=117 Identities=14% Similarity=0.189 Sum_probs=76.2
Q ss_pred ceEEEEe-cchHHHHHHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC-CC
Q 008128 417 LRCVVSG-SGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AK 493 (577)
Q Consensus 417 krVaIQG-fGNVG~~aA~~L~e-~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~-~e 493 (577)
.||+|.| +|++|+.+++.+.+ .+..+|++.|.++.- ..|.|..++ . + +. ++....++ ++
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~--~~G~d~gel---~------g-~~------~gv~v~~dl~~ 69 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSP--QLGQDAGAF---L------G-KQ------TGVALTDDIER 69 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCT--TTTSBTTTT---T------T-CC------CSCBCBCCHHH
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcc--cccccHHHH---h------C-CC------CCceecCCHHH
Confidence 6899999 89999999998876 578999999985421 135554432 0 0 00 11111111 22
Q ss_pred ccccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHHH----hCCcEEecchh
Q 008128 494 PWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLK----KANVLIAPAMA 555 (577)
Q Consensus 494 il~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~----~rGI~viPD~~ 555 (577)
++. ++||+|-++.... ..+++...++++..+|+. +-..|++..+.|+ +.++++.|.+.
T Consensus 70 ll~-~~DVVIDfT~p~a-~~~~~~~al~~G~~vVig--TTG~s~~~~~~L~~aa~~~~vv~a~N~s 131 (272)
T 4f3y_A 70 VCA-EADYLIDFTLPEG-TLVHLDAALRHDVKLVIG--TTGFSEPQKAQLRAAGEKIALVFSANMS 131 (272)
T ss_dssp HHH-HCSEEEECSCHHH-HHHHHHHHHHHTCEEEEC--CCCCCHHHHHHHHHHTTTSEEEECSCCC
T ss_pred Hhc-CCCEEEEcCCHHH-HHHHHHHHHHcCCCEEEE--CCCCCHHHHHHHHHHhccCCEEEECCCC
Confidence 333 7999999986543 467888888889999984 3446776555554 34677777664
No 153
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=94.74 E-value=0.075 Score=54.60 Aligned_cols=112 Identities=10% Similarity=0.082 Sum_probs=72.7
Q ss_pred CCceEEEEecchHHHH-HHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC-
Q 008128 415 KGLRCVVSGSGKIAMH-VLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE- 491 (577)
Q Consensus 415 ~GkrVaIQGfGNVG~~-aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~- 491 (577)
+-.||.|.|+|++|.. .+..|.+. ++.+++|+|.+ ++ ++ . +.+++...+++
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-----~~-----~~------~----------~~~~~~~~~~~~ 57 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERS-----KE-----LS------K----------ERYPQASIVRSF 57 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSS-----CC-----GG------G----------TTCTTSEEESCS
T ss_pred CceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCC-----HH-----HH------H----------HhCCCCceECCH
Confidence 3469999999999986 66777665 89999999983 32 11 0 11233333332
Q ss_pred CCccc-cccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHH---HhCCcEEecc
Q 008128 492 AKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVL---KKANVLIAPA 553 (577)
Q Consensus 492 ~eil~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL---~~rGI~viPD 553 (577)
++++. .++|+++=|+ .+..+.+.+...++.+..++||=-=.....|+++++ +++|+.+...
T Consensus 58 ~~ll~~~~vD~V~i~t-p~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~ 122 (362)
T 3fhl_A 58 KELTEDPEIDLIVVNT-PDNTHYEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAKKKGLMLSVY 122 (362)
T ss_dssp HHHHTCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHhcCCCCCEEEEeC-ChHHHHHHHHHHHHCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 44554 4689998875 557778888888888999999942122234555443 5667765533
No 154
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=94.73 E-value=0.083 Score=53.67 Aligned_cols=109 Identities=12% Similarity=0.124 Sum_probs=65.5
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCccc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWN 496 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil~ 496 (577)
++|.+.|.|++|...|+.|.+.|..| .+-|. +.++++.+. +. +++..+.-.-.-
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v-~v~dr----------~~~~~~~l~---~~------------Ga~~a~s~~e~~ 57 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLL-NVFDL----------VQSAVDGLV---AA------------GASAARSARDAV 57 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEE-EEECS----------SHHHHHHHH---HT------------TCEECSSHHHHH
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeE-EEEcC----------CHHHHHHHH---Hc------------CCEEcCCHHHHH
Confidence 48999999999999999999999984 45554 344442222 11 232222111123
Q ss_pred cccceeecCCcccccchhhHhh---hhc--cCceEEEecCCCC--CCHHHHHHHHhCCcEEe
Q 008128 497 ERCDVAFPCASQNEIDQSDAIN---LVN--SGCRILVEGSNMP--CTPEAVDVLKKANVLIA 551 (577)
Q Consensus 497 ~~cDIlIPcA~~n~It~enA~~---l~~--~~akiVvEgAN~p--~T~eA~~iL~~rGI~vi 551 (577)
..|||++-|=.......+.... ++. ..=++|++..+.. .+.+..+.++++||.|+
T Consensus 58 ~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~l 119 (300)
T 3obb_A 58 QGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAML 119 (300)
T ss_dssp TTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEE
T ss_pred hcCCceeecCCchHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 4799998886533222221110 111 1125777777654 45666788999999886
No 155
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=94.73 E-value=0.032 Score=58.14 Aligned_cols=102 Identities=14% Similarity=0.195 Sum_probs=60.2
Q ss_pred ceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHH--hhcCcc--cccccccCCce-EeC
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIK--SQQRSL--RDYSKTYARSK-YYD 490 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k--~~~g~l--~~y~~~~p~a~-~i~ 490 (577)
.||+|.|||.+|+.+++.|.+. +..+|+|.|. ++ +. +..+.++. ...+.+ ..-...+.+.. .+.
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~-----~~---~~--~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~ 72 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKT-----KP---DF--EARLAVEKGYKLFVAIPDNERVKLFEDAGIPVE 72 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEES-----SC---SH--HHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecC-----CH---HH--HHHHHHhcCCccccccCCCceeecccCCeEEEC
Confidence 4899999999999999999876 6899999996 22 22 22233332 111221 00000010000 111
Q ss_pred C--CCccccccceeecCCcccccchhhHh-hhhccCceEEEec
Q 008128 491 E--AKPWNERCDVAFPCASQNEIDQSDAI-NLVNSGCRILVEG 530 (577)
Q Consensus 491 ~--~eil~~~cDIlIPcA~~n~It~enA~-~l~~~~akiVvEg 530 (577)
+ .+++ .++||++-|+.. .++.+.+. ..++.|+++|..+
T Consensus 73 ~~~~~~~-~~vDiV~eatg~-~~s~~~a~~~~l~aG~~VI~sa 113 (343)
T 2yyy_A 73 GTILDII-EDADIVVDGAPK-KIGKQNLENIYKPHKVKAILQG 113 (343)
T ss_dssp CBGGGTG-GGCSEEEECCCT-THHHHHHHHTTTTTTCEEEECT
T ss_pred CchHHhc-cCCCEEEECCCc-cccHHHHHHHHHHCCCEEEECC
Confidence 1 1222 289999999754 45566774 7778899988755
No 156
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=94.66 E-value=0.053 Score=54.93 Aligned_cols=111 Identities=16% Similarity=0.236 Sum_probs=71.8
Q ss_pred ceEEEEecchHHHHHHHHHHHCC---CeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCC
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYG---AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAK 493 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~G---AkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~e 493 (577)
.||.|.|+|++|...++.|.+.+ +++++|+|. |.++. .+..+..+.-. .+-+-++
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~----------~~~~a---~~~a~~~~~~~---------~~~~~~~ 60 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR----------DLSRA---KEFAQKHDIPK---------AYGSYEE 60 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECS----------SHHHH---HHHHHHHTCSC---------EESSHHH
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcC----------CHHHH---HHHHHHcCCCc---------ccCCHHH
Confidence 58999999999999888887653 589999987 33333 22222211100 0112234
Q ss_pred cc-ccccceeecCCcccccchhhHhhhhccCceEEEecCCCCC--C-HHHHHH---HHhCCcEEecc
Q 008128 494 PW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC--T-PEAVDV---LKKANVLIAPA 553 (577)
Q Consensus 494 il-~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~--T-~eA~~i---L~~rGI~viPD 553 (577)
++ +.++|+++=|. .+..+.+.+...++.+..+++|= |+ | .|++++ .+++|+.+.-.
T Consensus 61 ll~~~~vD~V~i~t-p~~~H~~~~~~al~~GkhVl~EK---P~a~~~~e~~~l~~~a~~~~~~~~v~ 123 (334)
T 3ohs_X 61 LAKDPNVEVAYVGT-QHPQHKAAVMLCLAAGKAVLCEK---PMGVNAAEVREMVTEARSRGLFLMEA 123 (334)
T ss_dssp HHHCTTCCEEEECC-CGGGHHHHHHHHHHTTCEEEEES---SSSSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred HhcCCCCCEEEECC-CcHHHHHHHHHHHhcCCEEEEEC---CCCCCHHHHHHHHHHHHHhCCEEEEE
Confidence 55 35799999776 56678888888888899999994 42 2 344433 36778766543
No 157
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=94.65 E-value=0.073 Score=57.95 Aligned_cols=116 Identities=10% Similarity=0.051 Sum_probs=69.6
Q ss_pred CceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEe-CCCCc
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAKP 494 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i-~~~ei 494 (577)
-++|.|.|.|++|..+|..|.+.|.+| .+.|. +.+++..+. +. +.. +. ..... +.+++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V-~v~dr----------~~~~~~~l~---~~-g~~-g~-----~i~~~~s~~e~ 62 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVV-CAFNR----------TVSKVDDFL---AN-EAK-GT-----KVVGAQSLKEM 62 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCE-EEECS----------STHHHHHHH---HT-TTT-TS-----SCEECSSHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEE-EEEeC----------CHHHHHHHH---hc-ccC-CC-----ceeccCCHHHH
Confidence 468999999999999999999999985 45565 223332222 21 100 00 01101 11222
Q ss_pred cc--cccceeecCCcccccchhhHhhhhc--cCceEEEecCCCC--CCHHHHHHHHhCCcEEec
Q 008128 495 WN--ERCDVAFPCASQNEIDQSDAINLVN--SGCRILVEGSNMP--CTPEAVDVLKKANVLIAP 552 (577)
Q Consensus 495 l~--~~cDIlIPcA~~n~It~enA~~l~~--~~akiVvEgAN~p--~T~eA~~iL~~rGI~viP 552 (577)
.. .+||+++-|-.......+.+..|.. ..-.+|+.++|.. .|.+..+.|.++|+.++.
T Consensus 63 v~~l~~aDvVil~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd 126 (484)
T 4gwg_A 63 VSKLKKPRRIILLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVG 126 (484)
T ss_dssp HHTBCSSCEEEECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HhhccCCCEEEEecCChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhcccccc
Confidence 22 2589988887765433444444432 1336888888887 345555788999998875
No 158
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=94.63 E-value=0.067 Score=56.24 Aligned_cols=103 Identities=17% Similarity=0.288 Sum_probs=65.0
Q ss_pred CceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCccccccc------ccCCce--
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK------TYARSK-- 487 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~------~~p~a~-- 487 (577)
..+|+|-|||-||+.+.+.|.+....||+|.|. .|.+.+..|+++-..+|.+..-.+ .+ +.+
T Consensus 21 ~~kVaInGfGrIGr~vlr~l~e~~~~ivaIndl---------~d~~~~a~llkydS~hG~f~~~v~~~~~~l~i-~Gk~I 90 (356)
T 3hja_A 21 SMKLAINGFGRIGRNVFKIAFERGIDIVAINDL---------TDPKTLAHLLKYDSTFGVYNKKVESRDGAIVV-DGREI 90 (356)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEECS---------SCHHHHHHHHHEETTTEECSSCEEEETTEEEE-TTEEE
T ss_pred CeEEEEECCCHHHHHHHHHHHHCCCCEEEEeCC---------CCHHHhhhhhccccCCCCCCCCEEEcCCEEEE-CCEEE
Confidence 468999999999999999999888999999885 355555555544332333221110 01 111
Q ss_pred -EeC---CCC-cc-ccccceeecCCcccccc----hhhHhhhhc-cCce-EEEe
Q 008128 488 -YYD---EAK-PW-NERCDVAFPCASQNEID----QSDAINLVN-SGCR-ILVE 529 (577)
Q Consensus 488 -~i~---~~e-il-~~~cDIlIPcA~~n~It----~enA~~l~~-~~ak-iVvE 529 (577)
... +++ .| +..+||++.|+. .-.+ .+-|..-++ .||| +|+-
T Consensus 91 ~v~~~~dp~~i~w~~~gvDiV~esTG-~f~s~~~~~e~a~~hl~~aGAkkVVIs 143 (356)
T 3hja_A 91 KIIAERDPKNLPWAKLGIDVVIESTG-VFSSATSDKGGYLDHVNHAGAKKVILT 143 (356)
T ss_dssp EEECCSSGGGCCHHHHTCSEEEECSS-SCCSSCCTTCCGGGGTTTSCCSEEEES
T ss_pred EEEEcCChhhCCccccCCCEEEEecc-cccccchhHHHHHHHHHhCCCeEEEEC
Confidence 111 122 26 468999999984 3446 677777677 7886 4443
No 159
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=94.63 E-value=0.11 Score=53.94 Aligned_cols=105 Identities=16% Similarity=0.215 Sum_probs=66.3
Q ss_pred ceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccc----cC-Cce---
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT----YA-RSK--- 487 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~----~p-~a~--- 487 (577)
.||.|.|||.+|+.+++.|.+. ...||+|.|.. |.+.+..|.++...++.+....+. .. +.+
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~~---------~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~ 72 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLL---------DADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIR 72 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSS---------CHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEE
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCCC---------ChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEE
Confidence 4899999999999999999875 47899998851 344443444443333443221100 00 011
Q ss_pred EeCC---CCc-cc-cccceeecCCcccccchhhHhhhhccCceEEEecC
Q 008128 488 YYDE---AKP-WN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGS 531 (577)
Q Consensus 488 ~i~~---~ei-l~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgA 531 (577)
.+.. +++ |. ..|||++.|+ +.-.+.+.|+..++.+||.|.=.|
T Consensus 73 v~~~~dp~~i~w~~~~vDvVf~at-g~~~s~e~a~~~l~~GakvVdlSa 120 (330)
T 1gad_O 73 VTAERDPANLKWDEVGVDVVAEAT-GLFLTDETARKHITAGAKKVVMTG 120 (330)
T ss_dssp EECCSSGGGGCHHHHTCSEEEECS-SSCCSHHHHTHHHHTTCSEEEESS
T ss_pred EEEcCChhhCccccccCCEEEECC-CccccHHHHHHHHHCCCEEEEECC
Confidence 1222 222 52 5799999986 556788889888888998776554
No 160
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=94.57 E-value=0.041 Score=59.03 Aligned_cols=116 Identities=14% Similarity=0.157 Sum_probs=69.5
Q ss_pred CCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEe--C--
Q 008128 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY--D-- 490 (577)
Q Consensus 415 ~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i--~-- 490 (577)
++++|+|.|.|.+|+.+++.|.+.|++ |.+.|. +.+++ .+..+..+ +...+ +
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~-V~v~~R----------~~~~a---~~la~~~~----------~~~~~~~Dv~ 57 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIK-VTVACR----------TLESA---KKLSAGVQ----------HSTPISLDVN 57 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCE-EEEEES----------SHHHH---HHTTTTCT----------TEEEEECCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCE-EEEEEC----------CHHHH---HHHHHhcC----------CceEEEeecC
Confidence 478999999999999999999999998 566665 22232 11111111 11111 1
Q ss_pred C-C---CccccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHHHhCCcEEecchhc
Q 008128 491 E-A---KPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAA 556 (577)
Q Consensus 491 ~-~---eil~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI~viPD~~a 556 (577)
+ + +.+ .++|++|-|+... .+...+...++.+..++.+....|.+.+..+..+++|+.++++.-.
T Consensus 58 d~~~l~~~l-~~~DvVIn~a~~~-~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~~i~g~g~ 125 (450)
T 1ff9_A 58 DDAALDAEV-AKHDLVISLIPYT-FHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITVMNEIGL 125 (450)
T ss_dssp CHHHHHHHH-TTSSEEEECCC---CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCEEECSCBB
T ss_pred CHHHHHHHH-cCCcEEEECCccc-cchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCeEEeCCCC
Confidence 1 1 112 2799999998643 2333333334457788888544444444456668899988876544
No 161
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=94.52 E-value=0.1 Score=54.36 Aligned_cols=112 Identities=16% Similarity=0.148 Sum_probs=71.3
Q ss_pred ceEEEEecchHHHHHHHHHHHC---------CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCce
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY---------GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSK 487 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~---------GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~ 487 (577)
.||.|+|+|.+|..-++.|.+. +++||+|+|. |.+++ .+..++ |+..+
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~----------~~~~a---~~~a~~----------~~~~~ 83 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQ----------DQAMA---ERHAAK----------LGAEK 83 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECS----------SHHHH---HHHHHH----------HTCSE
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcC----------CHHHH---HHHHHH----------cCCCe
Confidence 5999999999998777777653 5789999997 33343 222222 12222
Q ss_pred EeCC-CCcc-ccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHH---HhCCcEEec
Q 008128 488 YYDE-AKPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVL---KKANVLIAP 552 (577)
Q Consensus 488 ~i~~-~eil-~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL---~~rGI~viP 552 (577)
.+++ ++++ +.++|+++=| +.+..+.+.+...++.|..++||=-=..+..||++++ +++|+.+.-
T Consensus 84 ~y~d~~~ll~~~~vD~V~I~-tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v 152 (412)
T 4gqa_A 84 AYGDWRELVNDPQVDVVDIT-SPNHLHYTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQAARRAGVKTMV 152 (412)
T ss_dssp EESSHHHHHHCTTCCEEEEC-SCGGGHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred EECCHHHHhcCCCCCEEEEC-CCcHHHHHHHHHHHHcCCCeEeecCCcCCHHHHHHHHHHHHHhCCeeee
Confidence 2222 4455 3578887754 4677788888888888889999853222345665544 455665543
No 162
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=94.51 E-value=0.056 Score=55.36 Aligned_cols=113 Identities=18% Similarity=0.168 Sum_probs=72.2
Q ss_pred ceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC-CCc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKP 494 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~-~ei 494 (577)
.+|.|.|+|++|...++.|.+. +.++++|+|. +.++. .+..+..+ +. +.....++ +++
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~----------~~~~~---~~~a~~~~-~~------~~~~~~~~~~~l 66 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASR----------SLEKA---KAFATANN-YP------ESTKIHGSYESL 66 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECS----------SHHHH---HHHHHHTT-CC------TTCEEESSHHHH
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcC----------CHHHH---HHHHHHhC-CC------CCCeeeCCHHHH
Confidence 5899999999999888888875 6889999997 23332 22222222 10 01222222 345
Q ss_pred cc-cccceeecCCcccccchhhHhhhhccCceEEEecCCCCCC-HHHHHH---HHhCCcEEe
Q 008128 495 WN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCT-PEAVDV---LKKANVLIA 551 (577)
Q Consensus 495 l~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T-~eA~~i---L~~rGI~vi 551 (577)
+. .++|+++-|+ .+..+.+.+...++.+..+++|=- +.+| .+++++ .+++|+.+.
T Consensus 67 l~~~~~D~V~i~t-p~~~h~~~~~~al~aGk~V~~EKP-~a~~~~e~~~l~~~a~~~g~~~~ 126 (362)
T 1ydw_A 67 LEDPEIDALYVPL-PTSLHVEWAIKAAEKGKHILLEKP-VAMNVTEFDKIVDACEANGVQIM 126 (362)
T ss_dssp HHCTTCCEEEECC-CGGGHHHHHHHHHTTTCEEEECSS-CSSSHHHHHHHHHHHHTTTCCEE
T ss_pred hcCCCCCEEEEcC-ChHHHHHHHHHHHHCCCeEEEecC-CcCCHHHHHHHHHHHHHcCCEEE
Confidence 53 4799999876 566778888888888999999841 1123 344443 356787665
No 163
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.48 E-value=0.18 Score=53.51 Aligned_cols=35 Identities=23% Similarity=0.268 Sum_probs=31.1
Q ss_pred CCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
.+.+++|+|.|+|.+|..+|+.+...|++ |.+.|.
T Consensus 181 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~-V~v~D~ 215 (381)
T 3p2y_A 181 TVKPASALVLGVGVAGLQALATAKRLGAK-TTGYDV 215 (381)
T ss_dssp EECCCEEEEESCSHHHHHHHHHHHHHTCE-EEEECS
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCCCE-EEEEeC
Confidence 36789999999999999999999999998 556776
No 164
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.44 E-value=0.2 Score=53.44 Aligned_cols=35 Identities=23% Similarity=0.414 Sum_probs=31.1
Q ss_pred CCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
.+.+.+|+|.|+|.+|..+|+.+...|++ |.+.|.
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~-V~v~D~ 221 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRLGAV-VSATDV 221 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCE-EEEECS
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCE-EEEEcC
Confidence 46788999999999999999999999998 557776
No 165
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=94.40 E-value=0.057 Score=55.68 Aligned_cols=120 Identities=13% Similarity=0.119 Sum_probs=69.9
Q ss_pred CCCCCC--ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceE
Q 008128 411 NKELKG--LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY 488 (577)
Q Consensus 411 g~~l~G--krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~ 488 (577)
..+++| +||+|.|.|.||+.+|+.|.+. .. |.+.|. +.+++ ...++ ..... ...
T Consensus 9 ~~~~~g~~mkilvlGaG~vG~~~~~~L~~~-~~-v~~~~~----------~~~~~---~~~~~---~~~~~-----~~d- 64 (365)
T 3abi_A 9 HHHIEGRHMKVLILGAGNIGRAIAWDLKDE-FD-VYIGDV----------NNENL---EKVKE---FATPL-----KVD- 64 (365)
T ss_dssp -------CCEEEEECCSHHHHHHHHHHTTT-SE-EEEEES----------CHHHH---HHHTT---TSEEE-----ECC-
T ss_pred cccccCCccEEEEECCCHHHHHHHHHHhcC-CC-eEEEEc----------CHHHH---HHHhc---cCCcE-----EEe-
Confidence 345566 4899999999999999999764 45 456654 33333 22211 11100 000
Q ss_pred eCC-CCcc--ccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHHHhCCcEEecchh
Q 008128 489 YDE-AKPW--NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMA 555 (577)
Q Consensus 489 i~~-~eil--~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI~viPD~~ 555 (577)
+.+ +.+- -.++||+|-|+... .+..-++..++.++.+|==.-..+.+.+-++..+++|+.++|+.=
T Consensus 65 ~~d~~~l~~~~~~~DvVi~~~p~~-~~~~v~~~~~~~g~~yvD~s~~~~~~~~l~~~a~~~g~~~i~~~G 133 (365)
T 3abi_A 65 ASNFDKLVEVMKEFELVIGALPGF-LGFKSIKAAIKSKVDMVDVSFMPENPLELRDEAEKAQVTIVFDAG 133 (365)
T ss_dssp TTCHHHHHHHHTTCSEEEECCCGG-GHHHHHHHHHHHTCEEEECCCCSSCGGGGHHHHHHTTCEEECCCB
T ss_pred cCCHHHHHHHHhCCCEEEEecCCc-ccchHHHHHHhcCcceEeeeccchhhhhhhhhhccCCceeeecCC
Confidence 111 1121 24799999887654 677777778888998765222223344556777899999998753
No 166
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.35 E-value=0.1 Score=51.38 Aligned_cols=35 Identities=31% Similarity=0.460 Sum_probs=31.5
Q ss_pred CCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEE
Q 008128 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaIS 446 (577)
.+++|++|+|.|.|.||...++.|.+.|++|+-|+
T Consensus 27 l~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVva 61 (223)
T 3dfz_A 27 LDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVA 61 (223)
T ss_dssp ECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEEC
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEC
Confidence 58999999999999999999999999999965443
No 167
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=94.35 E-value=0.12 Score=53.83 Aligned_cols=114 Identities=11% Similarity=0.124 Sum_probs=71.6
Q ss_pred CCCceEEEEecchHHHHHHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCC--ceEeC
Q 008128 414 LKGLRCVVSGSGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYAR--SKYYD 490 (577)
Q Consensus 414 l~GkrVaIQGfGNVG~~aA~~L~e-~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~--a~~i~ 490 (577)
.+.+++.|.|.|..|...++.|.. .+.+-|.|.|. +.++...+.+..... ++ ....+
T Consensus 127 ~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r----------~~~~a~~la~~~~~~----------~g~~~~~~~ 186 (350)
T 1x7d_A 127 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDT----------DPLATAKLIANLKEY----------SGLTIRRAS 186 (350)
T ss_dssp TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECS----------SHHHHHHHHHHHTTC----------TTCEEEECS
T ss_pred ccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC----------CHHHHHHHHHHHHhc----------cCceEEEeC
Confidence 467899999999999998887754 56666778776 344443332211110 11 11111
Q ss_pred C-CCccccccceeecCCccc----ccchhhHhhhhccCceEEEecCCCCCCHHHHHHHHhCCcEEec
Q 008128 491 E-AKPWNERCDVAFPCASQN----EIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAP 552 (577)
Q Consensus 491 ~-~eil~~~cDIlIPcA~~n----~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI~viP 552 (577)
. ++.+ .+|||++-|+... .+..+ .++.++-+++.|+..|-..|.+..+.+++..|+=
T Consensus 187 ~~~eav-~~aDiVi~aTps~~~~pvl~~~----~l~~G~~V~~vgs~~p~~~El~~~~~~~a~v~vD 248 (350)
T 1x7d_A 187 SVAEAV-KGVDIITTVTADKAYATIITPD----MLEPGMHLNAVGGDCPGKTELHADVLRNARVFVE 248 (350)
T ss_dssp SHHHHH-TTCSEEEECCCCSSEEEEECGG----GCCTTCEEEECSCCBTTBEEECHHHHHTSEEEES
T ss_pred CHHHHH-hcCCEEEEeccCCCCCceecHH----HcCCCCEEEECCCCCCCceeeCHHHHhcCcEEEC
Confidence 1 1222 3699999988754 33332 2356899999999999777766666677775553
No 168
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.34 E-value=0.095 Score=43.68 Aligned_cols=33 Identities=27% Similarity=0.287 Sum_probs=28.1
Q ss_pred CCceEEEEecchHHHHHHHHHHHCC-CeEEEEEcC
Q 008128 415 KGLRCVVSGSGKIAMHVLEKLIAYG-AIPVSVSDA 448 (577)
Q Consensus 415 ~GkrVaIQGfGNVG~~aA~~L~e~G-AkVVaISDs 448 (577)
.+++|+|.|.|.+|+.+++.|.+.| .+ |.+.|.
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~-v~~~~r 37 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYS-VTVADH 37 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEE-EEEEES
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCce-EEEEeC
Confidence 4689999999999999999999999 66 455665
No 169
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=94.29 E-value=0.17 Score=52.62 Aligned_cols=104 Identities=16% Similarity=0.258 Sum_probs=63.8
Q ss_pred ceEEEEecchHHHHHHHHHHHC---CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCccccccc----c--cCC--
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY---GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK----T--YAR-- 485 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~---GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~----~--~p~-- 485 (577)
+||+|.|||-+|+.+++.|.+. ...||+|.|. .|++.+..+.++....|.+..-.. . +.+
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~---------~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~ 71 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDL---------TDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKE 71 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECS---------SCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEE
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcC---------CChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeE
Confidence 4799999999999999999875 4899999884 144444334433333343311100 0 001
Q ss_pred ceEe---CCCCc-cc-cccceeecCCcccccchhhHhhhhccCce-EEEec
Q 008128 486 SKYY---DEAKP-WN-ERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVEG 530 (577)
Q Consensus 486 a~~i---~~~ei-l~-~~cDIlIPcA~~n~It~enA~~l~~~~ak-iVvEg 530 (577)
.+.. +++++ |. ..|||++.|+ +.-.+.+.|+..++.||| +|+.+
T Consensus 72 i~v~~~~dp~~l~w~~~~vDvV~~at-g~~~s~e~a~~~l~aGakkvVId~ 121 (332)
T 1hdg_O 72 IKVFAEPDPSKLPWKDLGVDFVIEST-GVFRNREKAELHLQAGAKKVIITA 121 (332)
T ss_dssp EEEECCSSGGGSCHHHHTCCEEEECS-SSCCBHHHHTHHHHTTCSEEEESS
T ss_pred EEEEecCChHHCcccccCCCEEEECC-ccchhHHHHHHHHHcCCcEEEEeC
Confidence 1122 12223 53 4799999986 456678888888888884 55543
No 170
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=94.27 E-value=0.036 Score=54.30 Aligned_cols=173 Identities=13% Similarity=0.089 Sum_probs=97.5
Q ss_pred CCCHHHHHHH--HHHHHHHHhhhcCCCcccCCCCCcCChhHHHHHHHHhhhhhCCccccccCccccccCCCCCCCcchHH
Q 008128 321 GKSDNEIMRF--CQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYG 398 (577)
Q Consensus 321 ~~s~~Eler~--~r~f~~eL~~~IGp~~DVpapDvGt~~~em~~i~~~y~~~~g~~~g~vTGKp~~~GGs~~r~eATG~G 398 (577)
..++.-+.|+ +-+|..+|.+- | ---++++|++-..+-.+-... |.++.=|..|+. --||-
T Consensus 6 ~ip~~ti~RL~~Y~r~l~~l~~~-g--------~~~isS~ela~~~gv~~~qiR--------kDls~fg~~G~~-g~GY~ 67 (212)
T 3keo_A 6 SIPKATAKRLSLYYRIFKRFNTD-G--------IEKASSKQIADALGIDSATVR--------RDFSYFGELGRR-GFGYD 67 (212)
T ss_dssp CCCHHHHTTHHHHHHHHHHHHHT-T--------CCEECHHHHHHHHTSCHHHHH--------HHHHTTGGGTTT-SSSEE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHC-C--------CeEECHHHHHHHHCCCHHHHH--------HHHHHHhhcCCC-CCCEE
Confidence 3467777775 56667776642 1 112577888776542211000 111122223322 23777
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHH--HHCCCeEEEEEcCCCeeeCCC-CCCHHhHhHHHHHHhhcCc
Q 008128 399 LVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKL--IAYGAIPVSVSDAKGYLVDED-GFDYMKISFLRDIKSQQRS 475 (577)
Q Consensus 399 V~~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L--~e~GAkVVaISDs~G~Iydp~-GLD~e~L~~l~~~k~~~g~ 475 (577)
|-+..++.-+.++.+ +..+|+|.|.||.|..+++.+ .+.|.++|++.|. ||+ -+-.+ .
T Consensus 68 V~~L~~~i~~~Lg~~-~~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~-----dp~~kiG~~-------------~ 128 (212)
T 3keo_A 68 VKKLMNFFAEILNDH-STTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDL-----DSNDLVGKT-------------T 128 (212)
T ss_dssp HHHHHHHHHHHTTTT-SCEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEEC-----TTSTTTTCB-------------C
T ss_pred HHHHHHHHHHHhCCC-CCCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeC-----CchhccCce-------------e
Confidence 777776666667755 457999999999999999873 4568999999997 443 11000 0
Q ss_pred ccccccccCCceEeCC-CCcc-ccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCC
Q 008128 476 LRDYSKTYARSKYYDE-AKPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCT 536 (577)
Q Consensus 476 l~~y~~~~p~a~~i~~-~eil-~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T 536 (577)
+.+. | ...++. +++. ..++|+.+-|..... ..+.++.+++.+.+.|.-=|...++
T Consensus 129 i~Gv----p-V~~~~dL~~~v~~~~Id~vIIAvPs~~-aq~v~d~lv~~GIk~I~nFap~~l~ 185 (212)
T 3keo_A 129 EDGI----P-VYGISTINDHLIDSDIETAILTVPSTE-AQEVADILVKAGIKGILSFSPVHLT 185 (212)
T ss_dssp TTCC----B-EEEGGGHHHHC-CCSCCEEEECSCGGG-HHHHHHHHHHHTCCEEEECSSSCCC
T ss_pred ECCe----E-EeCHHHHHHHHHHcCCCEEEEecCchh-HHHHHHHHHHcCCCEEEEcCCcccC
Confidence 1100 0 000110 1122 346788777765433 3467777777888888866655543
No 171
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=94.25 E-value=0.098 Score=53.41 Aligned_cols=118 Identities=9% Similarity=0.054 Sum_probs=77.3
Q ss_pred ceEEEEe-cchHHHHHHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC-CC
Q 008128 417 LRCVVSG-SGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AK 493 (577)
Q Consensus 417 krVaIQG-fGNVG~~aA~~L~e-~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~-~e 493 (577)
.||+|.| +|++|+.+++.+.+ .+..+|++.|.++. +..|.|..++ . | +.. .+....++ ++
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~--~~~G~d~gel---~------G-~~~-----~gv~v~~dl~~ 84 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGS--SFVDKDASIL---I------G-SDF-----LGVRITDDPES 84 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTC--TTTTSBGGGG---T------T-CSC-----CSCBCBSCHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc--cccccchHHh---h------c-cCc-----CCceeeCCHHH
Confidence 6899999 99999999999875 58899999998542 1246665443 0 1 100 11211221 23
Q ss_pred ccccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHHH----hCCcEEecchh
Q 008128 494 PWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLK----KANVLIAPAMA 555 (577)
Q Consensus 494 il~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~----~rGI~viPD~~ 555 (577)
++. ++||+|-++.... ..+++...++.+..+|+.-. ..+++..+.|+ +.++++.|.+.
T Consensus 85 ll~-~aDVvIDFT~p~a-~~~~~~~~l~~Gv~vViGTT--G~~~e~~~~L~~aa~~~~~~~a~N~S 146 (288)
T 3ijp_A 85 AFS-NTEGILDFSQPQA-SVLYANYAAQKSLIHIIGTT--GFSKTEEAQIADFAKYTTIVKSGNMS 146 (288)
T ss_dssp HTT-SCSEEEECSCHHH-HHHHHHHHHHHTCEEEECCC--CCCHHHHHHHHHHHTTSEEEECSCCC
T ss_pred Hhc-CCCEEEEcCCHHH-HHHHHHHHHHcCCCEEEECC--CCCHHHHHHHHHHhCcCCEEEECCCc
Confidence 333 7999999986544 46788888888999998542 35665544443 45778888764
No 172
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=94.18 E-value=0.14 Score=55.33 Aligned_cols=118 Identities=11% Similarity=0.006 Sum_probs=70.0
Q ss_pred CCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC-
Q 008128 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE- 491 (577)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~- 491 (577)
.+..++|.|.|.|++|+.+|..|.+.|..| .+.|. +.+++..+. +..+. .+....+.
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~~V-~v~~r----------~~~~~~~l~---~~~~~--------~gi~~~~s~ 69 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGYTV-SIFNR----------SREKTEEVI---AENPG--------KKLVPYYTV 69 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTCCE-EEECS----------SHHHHHHHH---HHSTT--------SCEEECSSH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCCeE-EEEeC----------CHHHHHHHH---hhCCC--------CCeEEeCCH
Confidence 345678999999999999999999999984 45554 234443222 22110 11221111
Q ss_pred CCccc--cccceeecCCcccccchhhHhhhhcc--CceEEEecCCCC--CCHHHHHHHHhCCcEEec
Q 008128 492 AKPWN--ERCDVAFPCASQNEIDQSDAINLVNS--GCRILVEGSNMP--CTPEAVDVLKKANVLIAP 552 (577)
Q Consensus 492 ~eil~--~~cDIlIPcA~~n~It~enA~~l~~~--~akiVvEgAN~p--~T~eA~~iL~~rGI~viP 552 (577)
++... .+||++|-|-.......+.+..|... .-.+|+..+|.. .|.+-.+.|.++|+.++.
T Consensus 70 ~e~v~~l~~aDvVil~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~ 136 (480)
T 2zyd_A 70 KEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIG 136 (480)
T ss_dssp HHHHHTBCSSCEEEECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhCCCCCCEEEEECCCHHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeC
Confidence 12222 14899998877654334444444221 235888999987 334456778888998873
No 173
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=94.13 E-value=0.11 Score=56.02 Aligned_cols=110 Identities=10% Similarity=0.060 Sum_probs=71.7
Q ss_pred CCceEEEEecchHHHHHHHHHHH----------CCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccC
Q 008128 415 KGLRCVVSGSGKIAMHVLEKLIA----------YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYA 484 (577)
Q Consensus 415 ~GkrVaIQGfGNVG~~aA~~L~e----------~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p 484 (577)
+-.+|.|.|+|+||+.+++.|.+ .+.+|++|+|++ .++. .... +
T Consensus 9 k~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~----------~~~~---~~~~-------------~ 62 (444)
T 3mtj_A 9 KPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRN----------LDKA---EALA-------------G 62 (444)
T ss_dssp SCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSC----------HHHH---HHHH-------------T
T ss_pred CcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECC----------HHHh---hhhc-------------c
Confidence 34689999999999999987764 467899999983 2221 1110 1
Q ss_pred CceEe-CCCCcc-ccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHH---HHHHhCCcEEe
Q 008128 485 RSKYY-DEAKPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV---DVLKKANVLIA 551 (577)
Q Consensus 485 ~a~~i-~~~eil-~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~---~iL~~rGI~vi 551 (577)
+..+. +.++++ +.++|+++-|........+.+...+++|..+|+|=- ..+..++. +.-+++|+.+.
T Consensus 63 ~~~~~~d~~ell~d~diDvVve~tp~~~~h~~~~~~AL~aGKhVvtenk-al~a~~~~eL~~~A~~~gv~l~ 133 (444)
T 3mtj_A 63 GLPLTTNPFDVVDDPEIDIVVELIGGLEPARELVMQAIANGKHVVTANK-HLVAKYGNEIFAAAQAKGVMVT 133 (444)
T ss_dssp TCCEESCTHHHHTCTTCCEEEECCCSSTTHHHHHHHHHHTTCEEEECCH-HHHHHHHHHHHHHHHHHTCCEE
T ss_pred cCcccCCHHHHhcCCCCCEEEEcCCCchHHHHHHHHHHHcCCEEEECCc-ccCHHHHHHHHHHHHHhCCeEE
Confidence 11112 223444 357899999987667788888888888999998632 12223333 33367788764
No 174
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=94.12 E-value=0.14 Score=53.54 Aligned_cols=108 Identities=15% Similarity=0.263 Sum_probs=66.7
Q ss_pred CCCCceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccC-----Cc
Q 008128 413 ELKGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYA-----RS 486 (577)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p-----~a 486 (577)
.+.-.||.|=|||-+|+.+++.+.+. ...||+|.|.- .|.+-+..|+++...+|.+.+-.+.-. +.
T Consensus 8 ~~~~~kv~INGfGrIGr~v~ra~~~~~~~evvaInd~~--------~~~~~~a~l~~yDS~hg~~~~~v~~~~~~l~v~G 79 (345)
T 2b4r_O 8 HMAATKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPF--------MDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGE 79 (345)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTT--------CCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESS
T ss_pred chhheEEEEeCCchHHHHHHHHHhhCCCcEEEEEcCCC--------CChHHHHHHhccCCCCCcCCCCEEEcCCEEEECC
Confidence 34567999999999999999998875 46899999841 255555445554433444322110000 01
Q ss_pred e---EeC---CCC-cc-ccccceeecCCcccccchhhHhhhhccCce-EEEe
Q 008128 487 K---YYD---EAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVE 529 (577)
Q Consensus 487 ~---~i~---~~e-il-~~~cDIlIPcA~~n~It~enA~~l~~~~ak-iVvE 529 (577)
+ ... +++ .| +..+||++.|+ +..++.+.|+..++.||| +|+-
T Consensus 80 k~i~v~~~~dp~~~~w~~~gvDiV~est-G~f~s~e~a~~hl~aGakkVVIs 130 (345)
T 2b4r_O 80 KKVSVFAEKDPSQIPWGKCQVDVVCEST-GVFLTKELASSHLKGGAKKVIMS 130 (345)
T ss_dssp CEEEEECCSSGGGCCHHHHTCSEEEECS-SSCCSHHHHTHHHHTTCSEEEES
T ss_pred EEEEEEEcCCcccCcccccCCCEEEECc-CccccHhhHHHHHHCCCCEEEEC
Confidence 1 111 111 24 34899999987 567788888888888887 4554
No 175
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=94.12 E-value=0.076 Score=53.74 Aligned_cols=109 Identities=15% Similarity=0.120 Sum_probs=67.7
Q ss_pred CceEEEEecchHHHHHHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCc
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKP 494 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e-~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~ei 494 (577)
-.||+|.|+|++|...++.|.+ .+.++++|+|. +++ ++ .. .+ +. | ..+ +++
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~-----~~~-----~~---~~----~g-~~-~-------~~~--~~l 60 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPDFEIAGIVRR-----NPA-----EV---PF----EL-QP-F-------RVV--SDI 60 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC------------------------CC-TT-S-------CEE--SSG
T ss_pred CCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcC-----CHH-----HH---HH----cC-CC-c-------CCH--HHH
Confidence 4699999999999999999887 57899999987 332 11 10 11 11 1 011 222
Q ss_pred cc-cccceeecCCcccccchhhHhhhhccCceEEEecCC-CCCCHHHH---HHHHhCCcEEecc
Q 008128 495 WN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN-MPCTPEAV---DVLKKANVLIAPA 553 (577)
Q Consensus 495 l~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN-~p~T~eA~---~iL~~rGI~viPD 553 (577)
.+ .++|+++-|+. +..+.+.+..+++.+..+|+|--- .+...++. +..+++|+.+.-.
T Consensus 61 ~~~~~~DvViiatp-~~~h~~~~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~~~v~ 123 (304)
T 3bio_A 61 EQLESVDVALVCSP-SREVERTALEILKKGICTADSFDIHDGILALRRSLGDAAGKSGAAAVIA 123 (304)
T ss_dssp GGSSSCCEEEECSC-HHHHHHHHHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTCEEECS
T ss_pred HhCCCCCEEEECCC-chhhHHHHHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCCEEEEe
Confidence 22 47999998774 556678888888889999998211 11223333 4446678654433
No 176
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=94.10 E-value=0.19 Score=49.96 Aligned_cols=96 Identities=22% Similarity=0.278 Sum_probs=66.2
Q ss_pred ceEEEEec-chHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCc
Q 008128 417 LRCVVSGS-GKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKP 494 (577)
Q Consensus 417 krVaIQGf-GNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~ei 494 (577)
.||+|.|+ |.+|+.+++.+.+. +..++++.|.. + |++++
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~------~--dl~~~------------------------------- 41 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG------D--PLSLL------------------------------- 41 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT------C--CTHHH-------------------------------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC------C--CHHHH-------------------------------
Confidence 37999995 99999999998865 89999999863 1 11111
Q ss_pred cccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHHHh----C-C--cEEecch
Q 008128 495 WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKK----A-N--VLIAPAM 554 (577)
Q Consensus 495 l~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~----r-G--I~viPD~ 554 (577)
+..++|++|.++.... ..+++...+++++.+|++-. ..+++..+.|++ . + +++.|.+
T Consensus 42 ~~~~~DvvIDfT~p~a-~~~~~~~a~~~g~~~VigTT--G~~~e~~~~l~~aa~~~~~~~vv~a~N~ 105 (245)
T 1p9l_A 42 TDGNTEVVIDFTHPDV-VMGNLEFLIDNGIHAVVGTT--GFTAERFQQVESWLVAKPNTSVLIAPNF 105 (245)
T ss_dssp HHTTCCEEEECSCTTT-HHHHHHHHHHTTCEEEECCC--CCCHHHHHHHHHHHHTSTTCEEEECSCC
T ss_pred hccCCcEEEEccChHH-HHHHHHHHHHcCCCEEEcCC--CCCHHHHHHHHHHHHhCCCCCEEEECCc
Confidence 1125789998886654 47777777788999999765 266665444422 1 4 4566654
No 177
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.09 E-value=0.11 Score=56.03 Aligned_cols=126 Identities=13% Similarity=0.142 Sum_probs=68.5
Q ss_pred HcCCCCCCceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCce
Q 008128 409 DMNKELKGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSK 487 (577)
Q Consensus 409 ~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~ 487 (577)
+.+.++++++|+|.|.|.+|+.+++.|.+. |.+ |.|.|. +.+++. ++.+.. .+.. .
T Consensus 16 ~~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~-V~v~~R----------~~~ka~---~la~~~-~~~~--------~ 72 (467)
T 2axq_A 16 HIEGRHMGKNVLLLGSGFVAQPVIDTLAANDDIN-VTVACR----------TLANAQ---ALAKPS-GSKA--------I 72 (467)
T ss_dssp -------CEEEEEECCSTTHHHHHHHHHTSTTEE-EEEEES----------SHHHHH---HHHGGG-TCEE--------E
T ss_pred ccccCCCCCEEEEECChHHHHHHHHHHHhCCCCe-EEEEEC----------CHHHHH---HHHHhc-CCcE--------E
Confidence 346788999999999999999999999998 566 677776 233332 222111 1110 0
Q ss_pred EeC--C-CCcc--ccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHHHhCCcEEecchhccc
Q 008128 488 YYD--E-AKPW--NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGA 558 (577)
Q Consensus 488 ~i~--~-~eil--~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI~viPD~~aNA 558 (577)
.++ + +++- -.++|++|-|+... .+..-+...++.++.++......|.+.+-.+..+++|+.+++..-.+.
T Consensus 73 ~~D~~d~~~l~~~l~~~DvVIn~tp~~-~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv~~i~g~G~~P 147 (467)
T 2axq_A 73 SLDVTDDSALDKVLADNDVVISLIPYT-FHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGITVMNEIGLDP 147 (467)
T ss_dssp ECCTTCHHHHHHHHHTSSEEEECSCGG-GHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTCEEECSCBBTT
T ss_pred EEecCCHHHHHHHHcCCCEEEECCchh-hhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCCEEEecCCcCc
Confidence 011 1 1111 13799999998643 233333333344666665432233333334556788999888775543
No 178
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=94.08 E-value=0.23 Score=51.47 Aligned_cols=96 Identities=13% Similarity=0.054 Sum_probs=61.6
Q ss_pred ceEEEEe-cchHHHHHHHHHHHCC-CeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCc
Q 008128 417 LRCVVSG-SGKIAMHVLEKLIAYG-AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKP 494 (577)
Q Consensus 417 krVaIQG-fGNVG~~aA~~L~e~G-AkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~ei 494 (577)
.||+|.| +|.||+.+++.|.+.. ..++++.+. ...|..+..+ .+.+.+. ......+.++
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~-----~~~g~~~~~~---------~~~~~g~----~~~~~~~~~~- 65 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSR-----RFAGEPVHFV---------HPNLRGR----TNLKFVPPEK- 65 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCS-----TTTTSBGGGT---------CGGGTTT----CCCBCBCGGG-
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECc-----hhhCchhHHh---------CchhcCc----ccccccchhH-
Confidence 6899999 8999999999998765 588888875 2334332221 1111110 0001111112
Q ss_pred cccccceeecCCcccccchhhHhhhhccCceEEEecCCC
Q 008128 495 WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNM 533 (577)
Q Consensus 495 l~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~ 533 (577)
| .+||+++-|+ ....+.+.+..+++.++++|-=++..
T Consensus 66 ~-~~vDvV~~a~-g~~~s~~~a~~~~~aG~~VId~Sa~~ 102 (345)
T 2ozp_A 66 L-EPADILVLAL-PHGVFAREFDRYSALAPVLVDLSADF 102 (345)
T ss_dssp C-CCCSEEEECC-CTTHHHHTHHHHHTTCSEEEECSSTT
T ss_pred h-cCCCEEEEcC-CcHHHHHHHHHHHHCCCEEEEcCccc
Confidence 5 5899999886 45567888888888899987766643
No 179
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=94.06 E-value=0.13 Score=54.44 Aligned_cols=115 Identities=16% Similarity=0.185 Sum_probs=73.6
Q ss_pred CCceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC---
Q 008128 415 KGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD--- 490 (577)
Q Consensus 415 ~GkrVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~--- 490 (577)
+-.||.|.|+|++|...++.|.+. ++++++|+|. +.+++..+.+.....+ +|.....+
T Consensus 19 ~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~----------~~~~~~~~a~~~~~~g--------~~~~~~~~~~~ 80 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADP----------DPYMVGRAQEILKKNG--------KKPAKVFGNGN 80 (444)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS----------CHHHHHHHHHHHHHTT--------CCCCEEECSST
T ss_pred CCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeC----------CHHHHHHHHHHHHhcC--------CCCCceeccCC
Confidence 346999999999999888888774 7899999997 3334322222111111 12222232
Q ss_pred --CCCccc-cccceeecCCcccccchhhHhhhhccCceEEEecCCCC--CC-HHHHHHH---HhCCcEEe
Q 008128 491 --EAKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMP--CT-PEAVDVL---KKANVLIA 551 (577)
Q Consensus 491 --~~eil~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p--~T-~eA~~iL---~~rGI~vi 551 (577)
-++++. .++|+++=|+. +..+.+.+...++.+..+++| -| +| .+++++. +++|+.+.
T Consensus 81 ~~~~~ll~~~~vD~V~i~tp-~~~h~~~~~~al~aGkhV~~E---KP~a~~~~ea~~l~~~a~~~g~~~~ 146 (444)
T 2ixa_A 81 DDYKNMLKDKNIDAVFVSSP-WEWHHEHGVAAMKAGKIVGME---VSGAITLEECWDYVKVSEQTGVPLM 146 (444)
T ss_dssp TTHHHHTTCTTCCEEEECCC-GGGHHHHHHHHHHTTCEEEEC---CCCCSSHHHHHHHHHHHHHHCCCEE
T ss_pred CCHHHHhcCCCCCEEEEcCC-cHHHHHHHHHHHHCCCeEEEe---CCCcCCHHHHHHHHHHHHHhCCeEE
Confidence 234554 47999998875 567788888888889999999 34 33 3444443 56676554
No 180
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=94.03 E-value=0.15 Score=53.16 Aligned_cols=101 Identities=19% Similarity=0.307 Sum_probs=65.5
Q ss_pred ceEEEEecchHHHHHHHHHHHC---CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccc------cCC--
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY---GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT------YAR-- 485 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~---GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~------~p~-- 485 (577)
.||.|-|||-+|+.+.+.+.+. ...||+|.|. .|.+.+..|+++-..+|.+..-++. +.+
T Consensus 3 ~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~---------~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~ 73 (335)
T 3doc_A 3 VRVAINGFGRIGRNILRAIVESGRTDIQVVAINDL---------GPVETNAHLLRYDSVHGRFPKEVEVAGDTIDVGYGP 73 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECS---------SCHHHHHHHHHEETTTEECSSCCEECSSEEESSSSE
T ss_pred EEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCC---------CCHHHHHHHhcccCCCCCCCCeEEEecCEEEECCEE
Confidence 4899999999999999998886 4688999875 3666665565553334433221110 111
Q ss_pred ceEe---CCCC-cc-ccccceeecCCcccccchhhHhhhhccCceEE
Q 008128 486 SKYY---DEAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCRIL 527 (577)
Q Consensus 486 a~~i---~~~e-il-~~~cDIlIPcA~~n~It~enA~~l~~~~akiV 527 (577)
.+.. ++++ .| +..+|+++.|+ +.-.+.+-|+.-++.|||-|
T Consensus 74 I~v~~e~dp~~i~w~~~gvDiVlesT-G~f~s~e~a~~hl~aGAkkV 119 (335)
T 3doc_A 74 IKVHAVRNPAELPWKEENVDIALECT-GIFTSRDKAALHLEAGAKRV 119 (335)
T ss_dssp EEEECCSSTTSSCTTTTTCSEEEECS-SSCCSHHHHTHHHHTTCSEE
T ss_pred EEEEeecccccccccccCCCEEEEcc-CccCCHHHHHHHHHcCCCEE
Confidence 1111 2223 36 56899999998 45568888887778888643
No 181
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=93.96 E-value=0.1 Score=54.07 Aligned_cols=100 Identities=14% Similarity=0.195 Sum_probs=61.8
Q ss_pred ceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCC-------ceE
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYAR-------SKY 488 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~-------a~~ 488 (577)
.||+|.|+|.+|+.+++.|.+. +..+++|+|. +++ ....+.. ..+ +.-|..+.+. .+.
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~-----~~~-----~~~~~a~---~~g-~~~~~~~~~~~~~~~~~v~v 67 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKT-----SPN-----YEAFIAH---RRG-IRIYVPQQSIKKFEESGIPV 67 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS-----SCS-----HHHHHHH---HTT-CCEECCGGGHHHHHTTTCCC
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcC-----ChH-----HHHHHHH---hcC-cceecCcCHHHHhccccccc
Confidence 4899999999999999999874 6899999995 221 1111111 111 1111000000 000
Q ss_pred eCC-CCccccccceeecCCcccccchhhHhhhhccCceEEEecCC
Q 008128 489 YDE-AKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (577)
Q Consensus 489 i~~-~eil~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (577)
.+. ++++ .++|+++-|+ ....+.+.++..++.++++|.-+++
T Consensus 68 ~~~~e~l~-~~vDvV~~aT-p~~~s~~~a~~~~~aG~kvV~~sa~ 110 (340)
T 1b7g_O 68 AGTVEDLI-KTSDIVVDTT-PNGVGAQYKPIYLQLQRNAIFQGGE 110 (340)
T ss_dssp CCCHHHHH-HHCSEEEECC-STTHHHHHHHHHHHTTCEEEECTTS
T ss_pred ccCHhHhh-cCCCEEEECC-CCchhHHHHHHHHHcCCeEEEeCCC
Confidence 000 0111 2799999985 5677788888888889999999988
No 182
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=93.86 E-value=0.43 Score=43.24 Aligned_cols=103 Identities=15% Similarity=0.110 Sum_probs=61.6
Q ss_pred CceEEEEec----chHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC-
Q 008128 416 GLRCVVSGS----GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD- 490 (577)
Q Consensus 416 GkrVaIQGf----GNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~- 490 (577)
-++|+|+|. |++|..+++.|.+.|.+|..+ ||+.. -++ +. +.+..+
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~v--------np~~~-g~~-------------i~-------G~~~~~s 63 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPV--------SPKVA-GKT-------------LL-------GQQGYAT 63 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEE--------CSSST-TSE-------------ET-------TEECCSS
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEe--------CCccc-ccc-------------cC-------CeeccCC
Confidence 468999999 899999999999999884332 33210 000 10 111111
Q ss_pred CCCccccccceeecCCcccccchhhHhhhhccCceE-EEecCCCCCCHHHHHHHHhCCcEEe
Q 008128 491 EAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRI-LVEGSNMPCTPEAVDVLKKANVLIA 551 (577)
Q Consensus 491 ~~eil~~~cDIlIPcA~~n~It~enA~~l~~~~aki-VvEgAN~p~T~eA~~iL~~rGI~vi 551 (577)
.+++ ..++|+++-|... ....+.+..+++.+++. ++.. .-.+.+..+.++++|+.++
T Consensus 64 l~el-~~~~Dlvii~vp~-~~v~~v~~~~~~~g~~~i~i~~--~~~~~~l~~~a~~~Gi~~i 121 (145)
T 2duw_A 64 LADV-PEKVDMVDVFRNS-EAAWGVAQEAIAIGAKTLWLQL--GVINEQAAVLAREAGLSVV 121 (145)
T ss_dssp TTTC-SSCCSEEECCSCS-THHHHHHHHHHHHTCCEEECCT--TCCCHHHHHHHHTTTCEEE
T ss_pred HHHc-CCCCCEEEEEeCH-HHHHHHHHHHHHcCCCEEEEcC--ChHHHHHHHHHHHcCCEEE
Confidence 1122 2367888877653 33444444454446554 4432 2236778889999999988
No 183
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=93.85 E-value=0.13 Score=53.55 Aligned_cols=104 Identities=16% Similarity=0.250 Sum_probs=64.1
Q ss_pred ceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCccccccc----c--cCC--ce
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK----T--YAR--SK 487 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~----~--~p~--a~ 487 (577)
.||+|.|||-+|+.+++.|.+. ...||+|.|. .|.+.+..+.++....|.+..-.. . +.+ .+
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~~veivain~~---------~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~ 72 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNPDIEVVAVNDL---------TDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEII 72 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCTTEEEEEEECS---------SCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEE
T ss_pred eEEEEECCCHHHHHHHHHHhCCCCeEEEEEeCC---------CCHHHHHHHhccCCcCCCcCceEEEccCcEEECCEEEE
Confidence 4799999999999999999876 5789999884 134444334433333333211000 0 011 11
Q ss_pred Ee---CCCCc-cc-cccceeecCCcccccchhhHhhhhccCce-EEEec
Q 008128 488 YY---DEAKP-WN-ERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVEG 530 (577)
Q Consensus 488 ~i---~~~ei-l~-~~cDIlIPcA~~n~It~enA~~l~~~~ak-iVvEg 530 (577)
.. +++++ |. ..|||++.|+ +.-.+.+.|+..++.||| +|+.+
T Consensus 73 v~~~~dp~~i~w~~~~vDvV~~at-g~~~s~e~a~~~l~~Gak~vVId~ 120 (334)
T 3cmc_O 73 VKAERDPENLAWGEIGVDIVVEST-GRFTKREDAAKHLEAGAKKVIISA 120 (334)
T ss_dssp EECCSSGGGCCTGGGTCCEEEECS-SSCCBHHHHTHHHHTTCSEEEESS
T ss_pred EEecCChhhcCcccCccCEEEECC-CchhhHHHHHHHHHCCCCEEEEeC
Confidence 22 12223 53 5899999986 456788888888888884 55543
No 184
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=93.84 E-value=0.11 Score=53.06 Aligned_cols=94 Identities=15% Similarity=0.111 Sum_probs=62.5
Q ss_pred CceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEe-CCCC
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAK 493 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i-~~~e 493 (577)
-.||+|.|+||+|+..++.|.+. +..+++++|.+ ++. ++ . + +.... +.++
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~-----~~~----~~---~-----------~-----gv~~~~d~~~ 54 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRR-----ATL----DT---K-----------T-----PVFDVADVDK 54 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESS-----SCC----SS---S-----------S-----CEEEGGGGGG
T ss_pred CCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCC-----HHH----hh---c-----------C-----CCceeCCHHH
Confidence 35899999999999999998876 68999999973 221 11 0 0 11111 1133
Q ss_pred ccccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHH
Q 008128 494 PWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEA 539 (577)
Q Consensus 494 il~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA 539 (577)
++ .++|+++-|.... .+.+.+...++.+..+|+|-.=....+++
T Consensus 55 ll-~~~DvViiatp~~-~h~~~~~~al~aG~~Vv~ekp~~~~~~~~ 98 (320)
T 1f06_A 55 HA-DDVDVLFLCMGSA-TDIPEQAPKFAQFACTVDTYDNHRDIPRH 98 (320)
T ss_dssp TT-TTCSEEEECSCTT-THHHHHHHHHTTTSEEECCCCCGGGHHHH
T ss_pred Hh-cCCCEEEEcCCcH-HHHHHHHHHHHCCCEEEECCCCcCCHHHH
Confidence 44 5899999887654 35677777778888999986433333454
No 185
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=93.82 E-value=0.22 Score=49.04 Aligned_cols=111 Identities=11% Similarity=-0.040 Sum_probs=64.2
Q ss_pred ceEEEEecchHHHHHHHHHHHC--CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEe-CCCC
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY--GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAK 493 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~--GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i-~~~e 493 (577)
++|.|.|+|++|..+|..|.+. |.. |.+.|. +.+.+.. ..+ .+... ... +..+
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~-V~~~d~----------~~~~~~~---~~~-~g~~~---------~~~~~~~~ 62 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYK-IVGYNR----------SDRSRDI---ALE-RGIVD---------EATADFKV 62 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSE-EEEECS----------SHHHHHH---HHH-TTSCS---------EEESCTTT
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcE-EEEEcC----------CHHHHHH---HHH-cCCcc---------cccCCHHH
Confidence 6899999999999999999987 456 455554 2333322 211 12110 111 2222
Q ss_pred ccccccceeecCCcccccchhhHhhhhcc---CceEEEecCCCCC--CHHHHHHHHhCCcEEecc
Q 008128 494 PWNERCDVAFPCASQNEIDQSDAINLVNS---GCRILVEGSNMPC--TPEAVDVLKKANVLIAPA 553 (577)
Q Consensus 494 il~~~cDIlIPcA~~n~It~enA~~l~~~---~akiVvEgAN~p~--T~eA~~iL~~rGI~viPD 553 (577)
.+ .+||++|-|.....+ .+-+..+... .-.+|+..+|... +....+.|.++++.++|.
T Consensus 63 ~~-~~aDvVilavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~ 125 (290)
T 3b1f_A 63 FA-ALADVIILAVPIKKT-IDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGS 125 (290)
T ss_dssp TG-GGCSEEEECSCHHHH-HHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEE
T ss_pred hh-cCCCEEEEcCCHHHH-HHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEe
Confidence 33 489999999887665 4444444221 2246776666543 223344454447878774
No 186
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=93.82 E-value=0.19 Score=51.08 Aligned_cols=111 Identities=16% Similarity=0.233 Sum_probs=70.0
Q ss_pred ceEEEEecchHHHHHHHHHH-H-CCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC-CCC
Q 008128 417 LRCVVSGSGKIAMHVLEKLI-A-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAK 493 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~-e-~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~-~~e 493 (577)
.||.|.|+|++|...++.|. + .+.++++|+|. |.+++ .+..+..+- .....+ .++
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~----------~~~~~---~~~~~~~g~---------~~~~~~~~~~ 60 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDV----------NQEAA---QKVVEQYQL---------NATVYPNDDS 60 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECS----------SHHHH---HHHHHHTTC---------CCEEESSHHH
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcC----------CHHHH---HHHHHHhCC---------CCeeeCCHHH
Confidence 58999999999999998888 4 57899999997 33333 222222220 112222 234
Q ss_pred ccc-cccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHH---HhCCcEE
Q 008128 494 PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVL---KKANVLI 550 (577)
Q Consensus 494 il~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL---~~rGI~v 550 (577)
++. .++|+++-|. .+..+.+.+...++.+..+++|=-=.....++++++ +++|+.+
T Consensus 61 ll~~~~~D~V~i~t-p~~~h~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~ 120 (344)
T 3mz0_A 61 LLADENVDAVLVTS-WGPAHESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRL 120 (344)
T ss_dssp HHHCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCC
T ss_pred HhcCCCCCEEEECC-CchhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEE
Confidence 443 4689988776 566677888888888888998852122224454433 5567643
No 187
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=93.82 E-value=0.16 Score=54.55 Aligned_cols=134 Identities=13% Similarity=0.192 Sum_probs=73.8
Q ss_pred cCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCc-----ccccccc-c
Q 008128 410 MNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS-----LRDYSKT-Y 483 (577)
Q Consensus 410 ~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~-----l~~y~~~-~ 483 (577)
+++..+-++|+|.|.|.||..+|..|.+ |..|+ +.|. |.++++.+ ++.... +.++... .
T Consensus 30 ~~r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~-~~D~----------~~~~v~~l---~~g~~~i~e~~l~~ll~~~~ 94 (432)
T 3pid_A 30 MGRGSEFMKITISGTGYVGLSNGVLIAQ-NHEVV-ALDI----------VQAKVDML---NQKISPIVDKEIQEYLAEKP 94 (432)
T ss_dssp -----CCCEEEEECCSHHHHHHHHHHHT-TSEEE-EECS----------CHHHHHHH---HTTCCSSCCHHHHHHHHHSC
T ss_pred cccccCCCEEEEECcCHHHHHHHHHHHc-CCeEE-EEec----------CHHHhhHH---hccCCccccccHHHHHhhcc
Confidence 3444555799999999999999999988 98865 4554 33343222 211111 1111000 0
Q ss_pred CCceEeCCCCccccccceeecCCccccc------c----h---hhHhhhhccCceEEEecCCCC-CCHHHHHHHHhCCcE
Q 008128 484 ARSKYYDEAKPWNERCDVAFPCASQNEI------D----Q---SDAINLVNSGCRILVEGSNMP-CTPEAVDVLKKANVL 549 (577)
Q Consensus 484 p~a~~i~~~eil~~~cDIlIPcA~~n~I------t----~---enA~~l~~~~akiVvEgAN~p-~T~eA~~iL~~rGI~ 549 (577)
.+.++.++-.-.-.+||++|-|...+.- + . +.+.. ++.++-+|.+..--| +|.+..+.|.+.++.
T Consensus 95 ~~l~~ttd~~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v~ 173 (432)
T 3pid_A 95 LNFRATTDKHDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNVI 173 (432)
T ss_dssp CCEEEESCHHHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCEE
T ss_pred CCeEEEcCHHHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccEe
Confidence 0122222100112479999988765421 1 1 11222 345677777777666 455666788888999
Q ss_pred Eecchhccccc
Q 008128 550 IAPAMAAGAGG 560 (577)
Q Consensus 550 viPD~~aNAGG 560 (577)
+.|.++ +-|+
T Consensus 174 ~sPe~~-~~G~ 183 (432)
T 3pid_A 174 FSPEFL-REGR 183 (432)
T ss_dssp ECCCCC-CTTS
T ss_pred ecCccC-Ccch
Confidence 999876 4444
No 188
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=93.77 E-value=0.2 Score=52.25 Aligned_cols=99 Identities=15% Similarity=0.167 Sum_probs=64.6
Q ss_pred CCceEEEEe-cchHHHHHHHHHHHCC-CeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCC
Q 008128 415 KGLRCVVSG-SGKIAMHVLEKLIAYG-AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEA 492 (577)
Q Consensus 415 ~GkrVaIQG-fGNVG~~aA~~L~e~G-AkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~ 492 (577)
+..||+|.| +|.+|+.+++.|.+.. ..+++|.|. .+.|..+... .+.+.... ..+....+ +
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~-----~~~g~~~~~~---------~~~~~~~v--~~dl~~~~-~ 77 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTAD-----RKAGQSMESV---------FPHLRAQK--LPTLVSVK-D 77 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCS-----TTTTSCHHHH---------CGGGTTSC--CCCCBCGG-G
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCc-----hhcCCCHHHh---------CchhcCcc--cccceecc-h
Confidence 346999999 9999999999998865 588999886 2445433221 12221100 00011112 3
Q ss_pred CccccccceeecCCcccccchhhHhhhhccCceEEEecCCC
Q 008128 493 KPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNM 533 (577)
Q Consensus 493 eil~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~ 533 (577)
++|. +||+++-|+ ....+.+.|..+ +.++++|-=++..
T Consensus 78 ~~~~-~vDvVf~at-p~~~s~~~a~~~-~aG~~VId~sa~~ 115 (359)
T 1xyg_A 78 ADFS-TVDAVFCCL-PHGTTQEIIKEL-PTALKIVDLSADF 115 (359)
T ss_dssp CCGG-GCSEEEECC-CTTTHHHHHHTS-CTTCEEEECSSTT
T ss_pred hHhc-CCCEEEEcC-CchhHHHHHHHH-hCCCEEEECCccc
Confidence 4564 899999876 556678888888 8899988766654
No 189
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=93.77 E-value=0.28 Score=51.13 Aligned_cols=103 Identities=18% Similarity=0.297 Sum_probs=66.9
Q ss_pred ceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccC-----CceE--
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYA-----RSKY-- 488 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p-----~a~~-- 488 (577)
.||.|-|||-+|+.+.+.+.+. ...||+|.|.. +|.+.+..|+++-..+|.+..-++.-. +.+.
T Consensus 2 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~--------~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~I~ 73 (332)
T 3pym_A 2 VRVAINGFGRIGRLVMRIALSRPNVEVVALNDPF--------ITNDYAAYMFKYDSTHGRYAGEVSHDDKHIIVDGKKIA 73 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHSTTCEEEEEECTT--------CCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEE
T ss_pred eEEEEECCCcHHHHHHHHHHhCCCcEEEEEeCCC--------CCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEE
Confidence 4799999999999999988876 47899998751 366666666655444454432111000 1111
Q ss_pred -e---CCCC-cc-ccccceeecCCcccccchhhHhhhhccCceEEE
Q 008128 489 -Y---DEAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILV 528 (577)
Q Consensus 489 -i---~~~e-il-~~~cDIlIPcA~~n~It~enA~~l~~~~akiVv 528 (577)
+ ++.+ .| +..+|+++.|+ +.-.+.+-|..-++.|||-|+
T Consensus 74 v~~e~dp~~i~w~~~gvDiVlesT-G~f~s~e~a~~hl~aGAkkVi 118 (332)
T 3pym_A 74 TYQERDPANLPWGSSNVDIAIDST-GVFKELDTAQKHIDAGAKKVV 118 (332)
T ss_dssp EECCSSGGGSCTTTTTCSEEEECS-SSSCSHHHHHHHHHTTCSEEE
T ss_pred EEeecccccCCccccCccEEEEec-ccccCHHHHHHHHHcCCCEEE
Confidence 1 1122 26 46899999997 455678888877788886433
No 190
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=93.76 E-value=0.92 Score=45.42 Aligned_cols=131 Identities=13% Similarity=0.158 Sum_probs=80.0
Q ss_pred CCcchHHHHHHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHh
Q 008128 392 TEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKS 471 (577)
Q Consensus 392 ~eATG~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~ 471 (577)
+.-.+.|...++++ .+.+ .+++|+|.|.|.+|+.++..|.+.|++-|.|.+. +.++...|.+.
T Consensus 100 ~NTD~~G~~~~l~~----~~~~-~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nR----------t~~ka~~la~~-- 162 (271)
T 1npy_A 100 YNTDYIAIVKLIEK----YHLN-KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYAR----------NVKTGQYLAAL-- 162 (271)
T ss_dssp ECHHHHHHHHHHHH----TTCC-TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECS----------CHHHHHHHHHH--
T ss_pred ecCCHHHHHHHHHH----hCCC-CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeC----------CHHHHHHHHHH--
Confidence 34456777666643 3444 6789999999999999999999999865778876 23343222211
Q ss_pred hcCcccccccccCCceEeCCCCccccccceeecCCcccccch---h----hHhhhhccCceEEEecCCCCCCHHHHHHHH
Q 008128 472 QQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQ---S----DAINLVNSGCRILVEGSNMPCTPEAVDVLK 544 (577)
Q Consensus 472 ~~g~l~~y~~~~p~a~~i~~~eil~~~cDIlIPcA~~n~It~---e----nA~~l~~~~akiVvEgAN~p~T~eA~~iL~ 544 (577)
.+ ..+.+... ..++||+|-|..-..... + ....| . ...+|++-.-.|....-.+.-+
T Consensus 163 -~~-----------~~~~~~~~--~~~~DivInaTp~gm~~~~~~~~~~~~~~~l-~-~~~~v~DlvY~P~~T~ll~~A~ 226 (271)
T 1npy_A 163 -YG-----------YAYINSLE--NQQADILVNVTSIGMKGGKEEMDLAFPKAFI-D-NASVAFDVVAMPVETPFIRYAQ 226 (271)
T ss_dssp -HT-----------CEEESCCT--TCCCSEEEECSSTTCTTSTTTTSCSSCHHHH-H-HCSEEEECCCSSSSCHHHHHHH
T ss_pred -cC-----------Cccchhhh--cccCCEEEECCCCCccCccccCCCCCCHHHc-C-CCCEEEEeecCCCCCHHHHHHH
Confidence 11 01111111 247899998877443211 0 11122 1 2468999998884334555667
Q ss_pred hCCcEEecchh
Q 008128 545 KANVLIAPAMA 555 (577)
Q Consensus 545 ~rGI~viPD~~ 555 (577)
++|+.++++.-
T Consensus 227 ~~G~~~i~Gl~ 237 (271)
T 1npy_A 227 ARGKQTISGAA 237 (271)
T ss_dssp HTTCEEECHHH
T ss_pred HCCCEEECCHH
Confidence 89988876653
No 191
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=93.74 E-value=0.11 Score=53.13 Aligned_cols=113 Identities=13% Similarity=0.086 Sum_probs=70.4
Q ss_pred ceEEEEecchHHH-HHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC-CCC
Q 008128 417 LRCVVSGSGKIAM-HVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAK 493 (577)
Q Consensus 417 krVaIQGfGNVG~-~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~-~~e 493 (577)
.||.|.|+|++|. ..+..|.+. ++++++|+|.+ ..+++ . +..+ .++...++ -++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~---------~~~~~---a---~~~~--------~~~~~~~~~~~~ 59 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH---------VNEKA---A---APFK--------EKGVNFTADLNE 59 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT---------CCHHH---H---HHHH--------TTTCEEESCTHH
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC---------HHHHH---H---HhhC--------CCCCeEECCHHH
Confidence 5899999999998 566666554 78999999985 11121 1 1100 02233232 244
Q ss_pred ccc-cccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHH---HHhCCcEEecc
Q 008128 494 PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDV---LKKANVLIAPA 553 (577)
Q Consensus 494 il~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~i---L~~rGI~viPD 553 (577)
++. .++|+++=|+ .+..+.+.+...++.+..+++|=-=.....+++++ .+++|+.+...
T Consensus 60 ll~~~~~D~V~i~t-p~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~ 122 (349)
T 3i23_A 60 LLTDPEIELITICT-PAHTHYDLAKQAILAGKSVIVEKPFCDTLEHAEELFALGQEKGVVVMPY 122 (349)
T ss_dssp HHSCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred HhcCCCCCEEEEeC-CcHHHHHHHHHHHHcCCEEEEECCCcCCHHHHHHHHHHHHHcCCeEEEE
Confidence 554 4689999877 45677888888888899999973211122445433 36778766543
No 192
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=93.71 E-value=0.091 Score=55.71 Aligned_cols=114 Identities=16% Similarity=0.220 Sum_probs=69.9
Q ss_pred CceEEEEecchHHH-HHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEe-CCC
Q 008128 416 GLRCVVSGSGKIAM-HVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEA 492 (577)
Q Consensus 416 GkrVaIQGfGNVG~-~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i-~~~ 492 (577)
-.+|.|.|+|++|+ ..++.|.+. ++++++|+|. |.+++ .+..+..+ +.. .+.... +.+
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~----------~~~~~---~~~a~~~g-~~~-----~~~~~~~~~~ 143 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSG----------NAEKA---KIVAAEYG-VDP-----RKIYDYSNFD 143 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECS----------CHHHH---HHHHHHTT-CCG-----GGEECSSSGG
T ss_pred ceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcC----------CHHHH---HHHHHHhC-CCc-----ccccccCCHH
Confidence 36899999999997 677777764 6889999997 23332 22222222 110 001111 224
Q ss_pred Cccc-cccceeecCCcccccchhhHhhhhccCceEEEecCCCCC--C-HHHHHHH---HhCCcEEec
Q 008128 493 KPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC--T-PEAVDVL---KKANVLIAP 552 (577)
Q Consensus 493 eil~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~--T-~eA~~iL---~~rGI~viP 552 (577)
+++. .++|+++-|.. +..+.+.+...++.+..+++|= |+ | .+++++. +++|+.+.-
T Consensus 144 ~ll~~~~vD~V~iatp-~~~h~~~~~~al~aGk~Vl~EK---Pla~~~~e~~~l~~~a~~~g~~~~v 206 (433)
T 1h6d_A 144 KIAKDPKIDAVYIILP-NSLHAEFAIRAFKAGKHVMCEK---PMATSVADCQRMIDAAKAANKKLMI 206 (433)
T ss_dssp GGGGCTTCCEEEECSC-GGGHHHHHHHHHHTTCEEEECS---SCCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred HHhcCCCCCEEEEcCC-chhHHHHHHHHHHCCCcEEEcC---CCCCCHHHHHHHHHHHHHhCCeEEE
Confidence 4553 47999998764 5567777877778888899983 42 3 3444333 566776543
No 193
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=93.66 E-value=0.062 Score=53.98 Aligned_cols=109 Identities=15% Similarity=0.173 Sum_probs=69.0
Q ss_pred ceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEe-CCCCc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAKP 494 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i-~~~ei 494 (577)
.+|.|.|+|++|...++.|.+. +.++++|+|.+ .+++ . .+.. . .... +.+++
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~----------~~~~---~-------~~~~---~---~~~~~~~~~~ 64 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSN----------PDNL---A-------LVPP---G---CVIESDWRSV 64 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESC----------HHHH---T-------TCCT---T---CEEESSTHHH
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCC----------HHHH---H-------HHHh---h---CcccCCHHHH
Confidence 5899999999999999998885 68899999972 2221 0 0100 0 1112 22345
Q ss_pred cc-cccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCH-HHH---HHHHhCCcEEecc
Q 008128 495 WN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTP-EAV---DVLKKANVLIAPA 553 (577)
Q Consensus 495 l~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~-eA~---~iL~~rGI~viPD 553 (577)
+. .++|+++-|.. +..+.+.+...++.+..+++|-- +.+|. ++. +..+++|+.+...
T Consensus 65 l~~~~~D~V~i~tp-~~~h~~~~~~al~~Gk~v~~eKP-~~~~~~~~~~l~~~a~~~g~~~~~~ 126 (315)
T 3c1a_A 65 VSAPEVEAVIIATP-PATHAEITLAAIASGKAVLVEKP-LTLDLAEAEAVAAAAKATGVMVWVE 126 (315)
T ss_dssp HTCTTCCEEEEESC-GGGHHHHHHHHHHTTCEEEEESS-SCSCHHHHHHHHHHHHHHCCCEEEE
T ss_pred hhCCCCCEEEEeCC-hHHHHHHHHHHHHCCCcEEEcCC-CcCCHHHHHHHHHHHHHcCCEEEEe
Confidence 53 57999998864 55667777777777888999841 22333 333 3335677765543
No 194
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=93.66 E-value=0.07 Score=55.24 Aligned_cols=35 Identities=29% Similarity=0.366 Sum_probs=32.0
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEE
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaI 445 (577)
+.++.|+|+-|.|+|++|+.+|+.+...|.+|++.
T Consensus 136 ~~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~ 170 (334)
T 3kb6_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCY 170 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred cceecCcEEEEECcchHHHHHHHhhcccCceeeec
Confidence 46789999999999999999999999999998754
No 195
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=93.60 E-value=0.095 Score=53.89 Aligned_cols=113 Identities=19% Similarity=0.201 Sum_probs=69.8
Q ss_pred CCCceEEEEecchHHHHHHHHHH-H-CCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC-
Q 008128 414 LKGLRCVVSGSGKIAMHVLEKLI-A-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD- 490 (577)
Q Consensus 414 l~GkrVaIQGfGNVG~~aA~~L~-e-~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~- 490 (577)
.+-.||.|.|+|++|...++.|. + .++.+++|+|. |++ ++ .+..+..+- .....+
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~-----~~~-----~~---~~~a~~~g~---------~~~~~~~ 78 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDI-----VAG-----RA---QAALDKYAI---------EAKDYND 78 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECS-----STT-----HH---HHHHHHHTC---------CCEEESS
T ss_pred CCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeC-----CHH-----HH---HHHHHHhCC---------CCeeeCC
Confidence 34569999999999999888888 4 47899999997 332 22 222222120 112222
Q ss_pred CCCccc-cccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHH---HhCCcE
Q 008128 491 EAKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVL---KKANVL 549 (577)
Q Consensus 491 ~~eil~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL---~~rGI~ 549 (577)
.++++. .++|+++=|+ .+..+.+.+...++.+..+++|=-=.....++++++ +++|+.
T Consensus 79 ~~~ll~~~~~D~V~i~t-p~~~h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~ 140 (357)
T 3ec7_A 79 YHDLINDKDVEVVIITA-SNEAHADVAVAALNANKYVFCEKPLAVTAADCQRVIEAEQKNGKR 140 (357)
T ss_dssp HHHHHHCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHTSC
T ss_pred HHHHhcCCCCCEEEEcC-CcHHHHHHHHHHHHCCCCEEeecCccCCHHHHHHHHHHHHHhCCe
Confidence 234443 4689988766 566677888888888888998851111223444433 556763
No 196
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=93.59 E-value=0.08 Score=55.24 Aligned_cols=118 Identities=17% Similarity=0.138 Sum_probs=71.4
Q ss_pred CCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC--
Q 008128 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-- 490 (577)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~-- 490 (577)
.-.+++|.|.|.|++|+.+++.|.+. .. |+|+|. +.+++. +..+. .. ...++
T Consensus 13 ~~~~~~v~IiGaG~iG~~ia~~L~~~-~~-V~V~~R----------~~~~a~---~la~~-~~----------~~~~d~~ 66 (365)
T 2z2v_A 13 EGRHMKVLILGAGNIGRAIAWDLKDE-FD-VYIGDV----------NNENLE---KVKEF-AT----------PLKVDAS 66 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHTTT-SE-EEEEES----------CHHHHH---HHTTT-SE----------EEECCTT
T ss_pred cCCCCeEEEEcCCHHHHHHHHHHHcC-Ce-EEEEEC----------CHHHHH---HHHhh-CC----------eEEEecC
Confidence 34578999999999999999999887 55 678886 344432 22111 10 00011
Q ss_pred C-CCc--cccccceeecCCcccccchhhHhhhhccCceEEEecCCCC-CCHHHHHHHHhCCcEEecchhccc
Q 008128 491 E-AKP--WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMP-CTPEAVDVLKKANVLIAPAMAAGA 558 (577)
Q Consensus 491 ~-~ei--l~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p-~T~eA~~iL~~rGI~viPD~~aNA 558 (577)
+ +++ +-.+||++|=|.. ...+..-+...++.++.+|- -++.+ -+.+-.+..+++|+.++|+.=...
T Consensus 67 ~~~~l~~ll~~~DvVIn~~P-~~~~~~v~~a~l~~G~~~vD-~s~~~~~~~~l~~~Ak~aG~~~l~g~G~dP 136 (365)
T 2z2v_A 67 NFDKLVEVMKEFELVIGALP-GFLGFKSIKAAIKSKVDMVD-VSFMPENPLELRDEAEKAQVTIVFDAGFAP 136 (365)
T ss_dssp CHHHHHHHHTTCSCEEECCC-HHHHHHHHHHHHHTTCCEEE-CCCCSSCGGGGHHHHHHTTCEEECSCBTTT
T ss_pred CHHHHHHHHhCCCEEEECCC-hhhhHHHHHHHHHhCCeEEE-ccCCcHHHHHHHHHHHHcCCEEEECCCCcc
Confidence 1 111 1127999999854 33444555555667877665 44443 344556778999999998764433
No 197
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=93.55 E-value=0.14 Score=51.81 Aligned_cols=113 Identities=17% Similarity=0.152 Sum_probs=63.6
Q ss_pred CceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCcc
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW 495 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil 495 (577)
-++|.|.|+|++|..+|+.|.+.|..-|.+.|.+ + +.+++.. .++ . +.+..+...-.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~-----~---~~~~~~~---~~~-~-----------g~~~~~~~~e~ 80 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA-----S---AESWRPR---AEE-L-----------GVSCKASVAEV 80 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS-----C---HHHHHHH---HHH-T-----------TCEECSCHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC-----C---CHHHHHH---HHH-C-----------CCEEeCCHHHH
Confidence 4699999999999999999999998235666762 1 1222211 111 1 12222110011
Q ss_pred ccccceeecCCcccccchhhHhhhhc---cCceEEEecCC-CCC-CHHHHHHHHhC--CcEEecc
Q 008128 496 NERCDVAFPCASQNEIDQSDAINLVN---SGCRILVEGSN-MPC-TPEAVDVLKKA--NVLIAPA 553 (577)
Q Consensus 496 ~~~cDIlIPcA~~n~It~enA~~l~~---~~akiVvEgAN-~p~-T~eA~~iL~~r--GI~viPD 553 (577)
-.+|||+|-|-....... .+..+.. .++ +|+.-.+ .|. +.+..+.+.++ |+.++.-
T Consensus 81 ~~~aDvVi~~vp~~~~~~-~~~~l~~~l~~~~-ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~ 143 (312)
T 3qsg_A 81 AGECDVIFSLVTAQAALE-VAQQAGPHLCEGA-LYADFTSCSPAVKRAIGDVISRHRPSAQYAAV 143 (312)
T ss_dssp HHHCSEEEECSCTTTHHH-HHHHHGGGCCTTC-EEEECCCCCHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HhcCCEEEEecCchhHHH-HHHhhHhhcCCCC-EEEEcCCCCHHHHHHHHHHHHhhcCCCeEEec
Confidence 247999999877655432 3344432 233 5555443 333 33444667777 8877643
No 198
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=93.52 E-value=0.052 Score=55.65 Aligned_cols=92 Identities=15% Similarity=0.126 Sum_probs=62.5
Q ss_pred CceEEEEecchHHHHHHHHHHH--CCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC-CC
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIA--YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EA 492 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e--~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~-~~ 492 (577)
..+|+|.|+|++|+..++.|.+ .+.++++++|. +++- . . .+..+..+. . ...+ .+
T Consensus 4 ~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~-----~~~~---~-~---~~~a~~~g~-~---------~~~~~~e 61 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGI-----DAAS---D-G---LARAQRMGV-T---------TTYAGVE 61 (312)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECS-----CTTC---H-H---HHHHHHTTC-C---------EESSHHH
T ss_pred CCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeC-----Chhh---h-H---HHHHHHcCC-C---------cccCCHH
Confidence 3689999999999999999965 57899999997 4331 0 1 111111111 0 0011 12
Q ss_pred Cccc----cccceeecCCcccccchhhHhhhhcc--CceEEEec
Q 008128 493 KPWN----ERCDVAFPCASQNEIDQSDAINLVNS--GCRILVEG 530 (577)
Q Consensus 493 eil~----~~cDIlIPcA~~n~It~enA~~l~~~--~akiVvEg 530 (577)
+++. .++|+++-|+. +..+.+.+...++. |+.+|+|-
T Consensus 62 ~ll~~~~~~~iDvV~~atp-~~~h~~~a~~al~a~~Gk~Vi~ek 104 (312)
T 1nvm_B 62 GLIKLPEFADIDFVFDATS-ASAHVQNEALLRQAKPGIRLIDLT 104 (312)
T ss_dssp HHHHSGGGGGEEEEEECSC-HHHHHHHHHHHHHHCTTCEEEECS
T ss_pred HHHhccCCCCCcEEEECCC-hHHHHHHHHHHHHhCCCCEEEEcC
Confidence 3332 46899999987 77888999988888 99999965
No 199
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=93.41 E-value=0.071 Score=54.33 Aligned_cols=108 Identities=18% Similarity=0.259 Sum_probs=69.6
Q ss_pred ceEEEEecchHHHH-HHH-HHHH-CCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC-C
Q 008128 417 LRCVVSGSGKIAMH-VLE-KLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-A 492 (577)
Q Consensus 417 krVaIQGfGNVG~~-aA~-~L~e-~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~-~ 492 (577)
.||.|.|+|++|.. .+. .+.. .++++++|+|. +++-. +. .. .+++...+++ +
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~-----~~~~~---~~------------~~----~~~~~~~~~~~~ 58 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRR-----HAKPE---EQ------------AP----IYSHIHFTSDLD 58 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECS-----SCCGG---GG------------SG----GGTTCEEESCTH
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcC-----CHhHH---HH------------HH----hcCCCceECCHH
Confidence 58999999999984 555 4333 58899999997 44311 10 11 1233443332 4
Q ss_pred Cccc-cccceeecCCcccccchhhHhhhhccCceEEEecCCCCC--C-HHHHH---HHHhCCcEEec
Q 008128 493 KPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC--T-PEAVD---VLKKANVLIAP 552 (577)
Q Consensus 493 eil~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~--T-~eA~~---iL~~rGI~viP 552 (577)
+++. .++|+++=|. .+..+.+.+...++.+..+++| -|+ | .++++ ..+++|+.+..
T Consensus 59 ~ll~~~~~D~V~i~t-p~~~h~~~~~~al~aGk~Vl~E---KP~a~~~~e~~~l~~~a~~~g~~~~v 121 (345)
T 3f4l_A 59 EVLNDPDVKLVVVCT-HADSHFEYAKRALEAGKNVLVE---KPFTPTLAQAKELFALAKSKGLTVTP 121 (345)
T ss_dssp HHHTCTTEEEEEECS-CGGGHHHHHHHHHHTTCEEEEC---SSSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred HHhcCCCCCEEEEcC-ChHHHHHHHHHHHHcCCcEEEe---CCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 4554 4689999877 5667788888888889999999 342 3 34443 34567776553
No 200
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=93.41 E-value=0.3 Score=47.71 Aligned_cols=107 Identities=13% Similarity=0.075 Sum_probs=61.6
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCccc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWN 496 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil~ 496 (577)
++|.|.|+|++|...+..|.+ |..| .+.|. + .+++..+.+ . + +. ..+..+.+
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V-~~~~~-----~-----~~~~~~~~~---~-g-~~----------~~~~~~~~- 53 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPT-LVWNR-----T-----FEKALRHQE---E-F-GS----------EAVPLERV- 53 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCE-EEECS-----S-----THHHHHHHH---H-H-CC----------EECCGGGG-
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeE-EEEeC-----C-----HHHHHHHHH---C-C-Cc----------ccCHHHHH-
Confidence 479999999999999999999 9884 56665 2 223322221 1 1 11 11112222
Q ss_pred cccceeecCCcccccchhhHhhh---hccCceEEEecCCCC-CC-HHHHHHHHhCCcEEec
Q 008128 497 ERCDVAFPCASQNEIDQSDAINL---VNSGCRILVEGSNMP-CT-PEAVDVLKKANVLIAP 552 (577)
Q Consensus 497 ~~cDIlIPcA~~n~It~enA~~l---~~~~akiVvEgAN~p-~T-~eA~~iL~~rGI~viP 552 (577)
.+||+++-|.....-..+....+ ++.++ +|+.-.|.. .+ .+..+.+.++|+.+++
T Consensus 54 ~~~D~vi~~v~~~~~~~~v~~~l~~~l~~~~-~vv~~s~~~~~~~~~l~~~~~~~g~~~~~ 113 (289)
T 2cvz_A 54 AEARVIFTCLPTTREVYEVAEALYPYLREGT-YWVDATSGEPEASRRLAERLREKGVTYLD 113 (289)
T ss_dssp GGCSEEEECCSSHHHHHHHHHHHTTTCCTTE-EEEECSCCCHHHHHHHHHHHHTTTEEEEE
T ss_pred hCCCEEEEeCCChHHHHHHHHHHHhhCCCCC-EEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 37999999987654223323333 22344 555555654 22 3345667777887764
No 201
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=93.33 E-value=0.33 Score=49.41 Aligned_cols=113 Identities=12% Similarity=0.078 Sum_probs=72.2
Q ss_pred CCceEEEEecc-hHHHHHHHHHHHC--CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC
Q 008128 415 KGLRCVVSGSG-KIAMHVLEKLIAY--GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (577)
Q Consensus 415 ~GkrVaIQGfG-NVG~~aA~~L~e~--GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~ 491 (577)
+-.||.|.|+| .+|...+..|.+. ++++++|+|. |.+++ .+..+..+. ....++
T Consensus 17 ~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~----------~~~~~---~~~a~~~~~----------~~~~~~ 73 (340)
T 1zh8_A 17 RKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSR----------TRSHA---EEFAKMVGN----------PAVFDS 73 (340)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECS----------SHHHH---HHHHHHHSS----------CEEESC
T ss_pred CceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcC----------CHHHH---HHHHHHhCC----------CcccCC
Confidence 44699999999 7898778888775 6899999997 33343 222222121 122222
Q ss_pred -CCccc-cccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHH---HhCCcEEe
Q 008128 492 -AKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVL---KKANVLIA 551 (577)
Q Consensus 492 -~eil~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL---~~rGI~vi 551 (577)
++++. .++|+++=|+ .+..+.+.+...++.|..+++|=-=.....|+++++ +++|+.+.
T Consensus 74 ~~~ll~~~~vD~V~i~t-p~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 137 (340)
T 1zh8_A 74 YEELLESGLVDAVDLTL-PVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKTVY 137 (340)
T ss_dssp HHHHHHSSCCSEEEECC-CGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSCEE
T ss_pred HHHHhcCCCCCEEEEeC-CchHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 34553 4789999876 466678888888888999999941111224555444 56787654
No 202
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=93.33 E-value=0.063 Score=55.28 Aligned_cols=99 Identities=12% Similarity=0.187 Sum_probs=61.1
Q ss_pred ceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCC---------c
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYAR---------S 486 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~---------a 486 (577)
.||+|.|+|.+|+..++.|.+. +..+++|+|.+ ++ .+..+.+ ..| ++-|. .+++ .
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~-----~~-----~~~~~~~---~~g-~~~~~-~~~~~v~~~~~~~~ 67 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTK-----PD-----FEAYRAK---ELG-IPVYA-ASEEFIPRFEKEGF 67 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESS-----CS-----HHHHHHH---HTT-CCEEE-SSGGGHHHHHHHTC
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCC-----HH-----HHHHHHH---hcC-ccccc-cccccceeccCCce
Confidence 4899999999999999999875 67999999972 22 1111111 111 00000 0000 0
Q ss_pred eEe-CCCCccccccceeecCCcccccchhhHhhhhccCceEEEecCC
Q 008128 487 KYY-DEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (577)
Q Consensus 487 ~~i-~~~eil~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (577)
... +.++++. ++|+++-|+ .+..+.+.+...++.|+++|+|+-.
T Consensus 68 ~v~~d~~~l~~-~vDvV~~aT-p~~~h~~~a~~~l~aGk~Vi~sap~ 112 (334)
T 2czc_A 68 EVAGTLNDLLE-KVDIIVDAT-PGGIGAKNKPLYEKAGVKAIFQGGE 112 (334)
T ss_dssp CCSCBHHHHHT-TCSEEEECC-STTHHHHHHHHHHHHTCEEEECTTS
T ss_pred EEcCcHHHhcc-CCCEEEECC-CccccHHHHHHHHHcCCceEeeccc
Confidence 000 1122333 899999986 4566677787778889999998643
No 203
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=93.31 E-value=0.08 Score=57.20 Aligned_cols=126 Identities=13% Similarity=0.148 Sum_probs=76.9
Q ss_pred CCceEEEEecchHHHHHHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhc-C---ccc------cccc--
Q 008128 415 KGLRCVVSGSGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQ-R---SLR------DYSK-- 481 (577)
Q Consensus 415 ~GkrVaIQGfGNVG~~aA~~L~e-~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~-g---~l~------~y~~-- 481 (577)
+-.||.|.|+|.+|+..++.+.+ .+.++++|+|. |+ +++. +..+.. | .+. +..+
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~-----~~-----era~---~~a~~~yG~~~~~~~~~~~~~i~~a~ 88 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSAR-----RL-----PNTF---KAIRTAYGDEENAREATTESAMTRAI 88 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECS-----ST-----HHHH---HHHHHHHSSSTTEEECSSHHHHHHHH
T ss_pred CceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeC-----CH-----HHHH---HHHHHhcCCccccccccchhhhhhhh
Confidence 44799999999999998887765 47899999998 33 2321 111111 1 000 0000
Q ss_pred ccCCceEeCC-CCccc-cccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCH-HHH---HHHHhCCcEEecchh
Q 008128 482 TYARSKYYDE-AKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTP-EAV---DVLKKANVLIAPAMA 555 (577)
Q Consensus 482 ~~p~a~~i~~-~eil~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~-eA~---~iL~~rGI~viPD~~ 555 (577)
..+.....++ ++++. .++|+++-|+.......+.+..-++.|..++++ |-+++. ++. +.-+++|+.+.+..-
T Consensus 89 ~~g~~~v~~D~eeLL~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~~--nk~l~~~eg~eL~~~A~e~Gvvl~~~~g 166 (446)
T 3upl_A 89 EAGKIAVTDDNDLILSNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVMM--NVEADVTIGPYLKAQADKQGVIYSLGAG 166 (446)
T ss_dssp HTTCEEEESCHHHHHTCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEEC--CHHHHHHHHHHHHHHHHHHTCCEEECTT
T ss_pred ccCCceEECCHHHHhcCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEec--CcccCHHHHHHHHHHHHHhCCeeeecCC
Confidence 0011222333 34554 479999999876556677777777889999985 555443 233 333678998877653
No 204
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=93.31 E-value=0.25 Score=51.62 Aligned_cols=102 Identities=21% Similarity=0.370 Sum_probs=66.6
Q ss_pred ceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccc------cCCceEe
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT------YARSKYY 489 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~------~p~a~~i 489 (577)
.||.|-|||-+|+.+.+.+.+. ...||+|.|. +|.+.+..|+++-..+|.+..-++. + +.+.+
T Consensus 5 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaind~---------~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i-nGk~I 74 (338)
T 3lvf_P 5 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDL---------TDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRV-NGKEV 74 (338)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS---------SCHHHHHHHHHCCTTTCCCSSCEEEETTEEEE-TTEEE
T ss_pred EEEEEECCCcHHHHHHHHHHHCCCceEEEEecC---------CCHHHHHHHhccCCCCCCcCCeEEEcCCEEEE-CCEEE
Confidence 4899999999999999988876 4688999873 3666665666554444544321110 1 11111
Q ss_pred ---C---CCC-cc-ccccceeecCCcccccchhhHhhhhccCce-EEEe
Q 008128 490 ---D---EAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVE 529 (577)
Q Consensus 490 ---~---~~e-il-~~~cDIlIPcA~~n~It~enA~~l~~~~ak-iVvE 529 (577)
. +++ .| +..+||++.|+ +.-.+.+-|+.-++.||| +|+-
T Consensus 75 ~v~~e~dp~~i~w~~~gvDiVlesT-G~f~s~e~a~~hl~aGAkkViIS 122 (338)
T 3lvf_P 75 KSFSEPDASKLPWKDLNIDVVLECT-GFYTDKDKAQAHIEAGAKKVLIS 122 (338)
T ss_dssp EEECCSCGGGSCTTTTTCSEEEECS-SSCCBHHHHHHHHHTTCSEEEES
T ss_pred EEEEecccccCCccccCCCEEEEcc-CCcCCHHHHHHHHHcCCCEEEEC
Confidence 1 122 26 56899999997 455688888887788886 4443
No 205
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=93.30 E-value=0.18 Score=49.70 Aligned_cols=107 Identities=14% Similarity=0.167 Sum_probs=63.0
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC-CCcc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKPW 495 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~-~eil 495 (577)
++|.|.|+|++|...++.|.+.|..| .+.|. +.+++ ..+.+. + + ...+. .+.+
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V-~~~~~----------~~~~~---~~~~~~-g-~----------~~~~~~~~~~ 58 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTV-YAFDL----------MEANV---AAVVAQ-G-A----------QACENNQKVA 58 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEE-EEECS----------SHHHH---HHHHTT-T-C----------EECSSHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeE-EEEeC----------CHHHH---HHHHHC-C-C----------eecCCHHHHH
Confidence 68999999999999999999999885 46665 22333 222211 1 1 11111 1122
Q ss_pred ccccceeecCCcccccchhhHh---hh---hccCceEEEecCCCC--CCHHHHHHHHhCCcEEe
Q 008128 496 NERCDVAFPCASQNEIDQSDAI---NL---VNSGCRILVEGSNMP--CTPEAVDVLKKANVLIA 551 (577)
Q Consensus 496 ~~~cDIlIPcA~~n~It~enA~---~l---~~~~akiVvEgAN~p--~T~eA~~iL~~rGI~vi 551 (577)
.+||+++-|.....-..+... .| ++.+ ++|+.-+|+. .+.+..+.+.++|+.++
T Consensus 59 -~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~-~~vv~~~~~~~~~~~~l~~~~~~~g~~~~ 120 (301)
T 3cky_A 59 -AASDIIFTSLPNAGIVETVMNGPGGVLSACKAG-TVIVDMSSVSPSSTLKMAKVAAEKGIDYV 120 (301)
T ss_dssp -HHCSEEEECCSSHHHHHHHHHSTTCHHHHSCTT-CEEEECCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred -hCCCEEEEECCCHHHHHHHHcCcchHhhcCCCC-CEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 369999998854332222221 22 2223 4677777776 33444567778898876
No 206
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=93.28 E-value=0.27 Score=49.79 Aligned_cols=115 Identities=11% Similarity=0.049 Sum_probs=71.3
Q ss_pred CCceEEEEecchHHHHHHHHHHHC--------CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCc
Q 008128 415 KGLRCVVSGSGKIAMHVLEKLIAY--------GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARS 486 (577)
Q Consensus 415 ~GkrVaIQGfGNVG~~aA~~L~e~--------GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a 486 (577)
+..||.|+|+|.+|..-++.+.+. ++.|++|+|. |.+++ .+..++.+ ..
T Consensus 5 ~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~----------~~~~a---~~~a~~~g----------~~ 61 (390)
T 4h3v_A 5 TNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGR----------DAEAV---RAAAGKLG----------WS 61 (390)
T ss_dssp CEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECS----------SHHHH---HHHHHHHT----------CS
T ss_pred CcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcC----------CHHHH---HHHHHHcC----------CC
Confidence 446999999999998766666543 3589999997 33343 22222222 11
Q ss_pred eEeCC-CCcc-ccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHH---HH---hCCcEEecc
Q 008128 487 KYYDE-AKPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDV---LK---KANVLIAPA 553 (577)
Q Consensus 487 ~~i~~-~eil-~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~i---L~---~rGI~viPD 553 (577)
+..++ ++++ +.++|+++=|+ .+..+.+.+...++.|..++||=-=..+..||+++ .+ ++|+.+...
T Consensus 62 ~~~~d~~~ll~~~~iDaV~I~t-P~~~H~~~~~~al~aGkhVl~EKPla~t~~ea~~l~~~~~~~~~~g~~~~v~ 135 (390)
T 4h3v_A 62 TTETDWRTLLERDDVQLVDVCT-PGDSHAEIAIAALEAGKHVLCEKPLANTVAEAEAMAAAAAKAAAGGIRSMVG 135 (390)
T ss_dssp EEESCHHHHTTCTTCSEEEECS-CGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cccCCHHHHhcCCCCCEEEEeC-ChHHHHHHHHHHHHcCCCceeecCcccchhHHHHHHHHHHHHHhcCCceEEE
Confidence 22222 4455 34688877765 56778888888888888999985322233567665 32 367665543
No 207
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=93.20 E-value=0.23 Score=53.64 Aligned_cols=117 Identities=16% Similarity=0.114 Sum_probs=67.9
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC-CCcc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKPW 495 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~-~eil 495 (577)
++|.|.|.|++|..+|..|.+.|..| .+.|. +.+++..+. +..+.... -.+....+. +++.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V-~v~dr----------~~~~~~~l~---~~~g~~~~----~~~i~~~~~~~e~v 63 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKV-AVFNR----------TYSKSEEFM---KANASAPF----AGNLKAFETMEAFA 63 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCE-EEECS----------SHHHHHHHH---HHTTTSTT----GGGEEECSCHHHHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEE-EEEeC----------CHHHHHHHH---HhcCCCCC----CCCeEEECCHHHHH
Confidence 47999999999999999999999984 56664 333443222 22121000 001111111 2222
Q ss_pred cc--ccceeecCCcccccchhhHhhhh---ccCceEEEecCCCCC--CHHHHHHHHhCCcEEec
Q 008128 496 NE--RCDVAFPCASQNEIDQSDAINLV---NSGCRILVEGSNMPC--TPEAVDVLKKANVLIAP 552 (577)
Q Consensus 496 ~~--~cDIlIPcA~~n~It~enA~~l~---~~~akiVvEgAN~p~--T~eA~~iL~~rGI~viP 552 (577)
.. +||+++-|.....-..+.+..|. +.+ ++|+..+|... +.+-.+.+.++|+.++.
T Consensus 64 ~~l~~aDvVilaVp~~~~v~~vl~~l~~~l~~g-~iIId~sng~~~~~~~l~~~l~~~g~~~v~ 126 (478)
T 1pgj_A 64 ASLKKPRKALILVQAGAATDSTIEQLKKVFEKG-DILVDTGNAHFKDQGRRAQQLEAAGLRFLG 126 (478)
T ss_dssp HHBCSSCEEEECCCCSHHHHHHHHHHHHHCCTT-CEEEECCCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred hcccCCCEEEEecCChHHHHHHHHHHHhhCCCC-CEEEECCCCChHHHHHHHHHHHHCCCeEEE
Confidence 22 59999988776533333333332 223 57888888863 34445777888987763
No 208
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=93.17 E-value=0.19 Score=54.08 Aligned_cols=113 Identities=12% Similarity=0.102 Sum_probs=67.4
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC-CCCcc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAKPW 495 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~-~~eil 495 (577)
++|.|.|.|++|+.+|..|.+.|.. |.+.|. +.+++..+. +..+. .+....+ .+++.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~-V~v~dr----------~~~~~~~l~---~~~~~--------~gi~~~~s~~e~v 63 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYT-VAIYNR----------TTSKTEEVF---KEHQD--------KNLVFTKTLEEFV 63 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCC-EEEECS----------SHHHHHHHH---HHTTT--------SCEEECSSHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCE-EEEEcC----------CHHHHHHHH---HhCcC--------CCeEEeCCHHHHH
Confidence 5899999999999999999999998 456664 233433222 22110 0121111 12222
Q ss_pred c--cccceeecCCcccccchhhHhhhh---ccCceEEEecCCCC--CCHHHHHHHHhCCcEEec
Q 008128 496 N--ERCDVAFPCASQNEIDQSDAINLV---NSGCRILVEGSNMP--CTPEAVDVLKKANVLIAP 552 (577)
Q Consensus 496 ~--~~cDIlIPcA~~n~It~enA~~l~---~~~akiVvEgAN~p--~T~eA~~iL~~rGI~viP 552 (577)
. .+||+++-|........+....|. +.+ ++|+..+|.. .|.+-.+.+.++|+.++.
T Consensus 64 ~~l~~aDvVilavp~~~~v~~vl~~l~~~l~~g-~iiId~s~~~~~~~~~l~~~l~~~g~~~v~ 126 (474)
T 2iz1_A 64 GSLEKPRRIMLMVQAGAATDATIKSLLPLLDIG-DILIDGGNTHFPDTMRRNAELADSGINFIG 126 (474)
T ss_dssp HTBCSSCEEEECCCTTHHHHHHHHHHGGGCCTT-CEEEECSCCCHHHHHHHHHHTTTSSCEEEE
T ss_pred hhccCCCEEEEEccCchHHHHHHHHHHhhCCCC-CEEEECCCCCHHHHHHHHHHHHHCCCeEEC
Confidence 2 149999998876543333333332 223 4788888876 234445667778988773
No 209
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=93.14 E-value=0.048 Score=56.52 Aligned_cols=104 Identities=13% Similarity=0.204 Sum_probs=61.6
Q ss_pred ceEEEEecchHHHHHHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHH--hhcCcccccccccCCc-eEeCC-
Q 008128 417 LRCVVSGSGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIK--SQQRSLRDYSKTYARS-KYYDE- 491 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e-~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k--~~~g~l~~y~~~~p~a-~~i~~- 491 (577)
.||+|.|+|.+|+.+++.|.+ .+..+++|.|. +++ ....+.... ...+.+.+....+.+. -.+.+
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~-----~~~-----~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~ 71 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKT-----RPD-----FEARMALKKGYDLYVAIPERVKLFEKAGIEVAGT 71 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEES-----SCS-----HHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEE
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcC-----Chh-----HHHHhcCCcchhhccccccceeeecCCceEEcCC
Confidence 489999999999999999987 57899999986 221 111111110 0001111000000000 00111
Q ss_pred -CCccccccceeecCCcccccchhhHhhhhccCceEEEecCC
Q 008128 492 -AKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (577)
Q Consensus 492 -~eil~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (577)
++++ .+||+++-|+. ...+.+.+...++.|+++|.+++-
T Consensus 72 ~~~~~-~~vDvV~~atp-~~~~~~~a~~~l~aG~~VId~sp~ 111 (337)
T 1cf2_P 72 VDDML-DEADIVIDCTP-EGIGAKNLKMYKEKGIKAIFQGGE 111 (337)
T ss_dssp HHHHH-HTCSEEEECCS-TTHHHHHHHHHHHHTCCEEECTTS
T ss_pred HHHHh-cCCCEEEECCC-chhhHHHHHHHHHcCCEEEEecCC
Confidence 1122 37999999864 556778888888889999998865
No 210
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=93.08 E-value=0.1 Score=53.12 Aligned_cols=36 Identities=17% Similarity=0.240 Sum_probs=29.8
Q ss_pred CCCceEEEEecchHHH-HHHHHHHHC-CCeEEEEEcCC
Q 008128 414 LKGLRCVVSGSGKIAM-HVLEKLIAY-GAIPVSVSDAK 449 (577)
Q Consensus 414 l~GkrVaIQGfGNVG~-~aA~~L~e~-GAkVVaISDs~ 449 (577)
.+-.||.|.|+|++|. ..++.|.+. +.++++|+|.+
T Consensus 23 M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~ 60 (330)
T 4ew6_A 23 MSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRH 60 (330)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSS
T ss_pred CCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCC
Confidence 4457999999999998 567777764 78999999985
No 211
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=93.06 E-value=0.2 Score=52.48 Aligned_cols=101 Identities=16% Similarity=0.295 Sum_probs=65.3
Q ss_pred ceEEEEecchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccC-----CceEe-
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYA-----RSKYY- 489 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p-----~a~~i- 489 (577)
.||.|-|||-+|+.+.+.+.+. ...||+|.|. .|.+.+..|+++-..+|.+..-++.-. +.+.+
T Consensus 5 ~kv~INGfGrIGr~v~Ra~~~~~~~~ivaINd~---------~d~~~~a~llkyDS~hG~f~~~v~~~~~~l~inGk~I~ 75 (345)
T 4dib_A 5 TRVAINGFGRIGRMVFRQAIKESAFEIVAINAS---------YPSETLAHLIKYDTVHGKFDGTVEAFEDHLLVDGKMIR 75 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHTTCSSSEEEEEECS---------SCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEE
T ss_pred EEEEEECCCcHHHHHHHHHHhCCCceEEEEcCC---------CCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEE
Confidence 5899999999999999988875 4789999885 366666556555334444332111000 11111
Q ss_pred --C---CCC-cc-ccccceeecCCcccccchhhHhhhhccCceEE
Q 008128 490 --D---EAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCRIL 527 (577)
Q Consensus 490 --~---~~e-il-~~~cDIlIPcA~~n~It~enA~~l~~~~akiV 527 (577)
. +++ .| +..+|+++.|+ +.-.+.+-|..-++.|||-|
T Consensus 76 v~~e~dp~~i~w~~~gvDiVlesT-G~f~s~e~a~~hl~aGAkkV 119 (345)
T 4dib_A 76 LLNNRDPKELPWTDLGVEVVIEAT-GKFNSKEKAILHVEAGAKKV 119 (345)
T ss_dssp EECCSCGGGSCTTTTTEEEEEECS-SSCCBHHHHTHHHHTTCSEE
T ss_pred EeecCChhhCCccccCccEEEEec-cCcCCHHHHHHHHHCCCCEE
Confidence 1 122 26 46899999997 45567888887778888643
No 212
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.02 E-value=0.082 Score=53.55 Aligned_cols=36 Identities=31% Similarity=0.433 Sum_probs=32.1
Q ss_pred CCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEc
Q 008128 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISD 447 (577)
.+++|++|+|.|.|.||...++.|.+.|++|+-|+.
T Consensus 9 ~~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap 44 (274)
T 1kyq_A 9 HQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSP 44 (274)
T ss_dssp ECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEE
T ss_pred EEcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcC
Confidence 478999999999999999999999999999765543
No 213
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=92.99 E-value=0.2 Score=54.49 Aligned_cols=175 Identities=15% Similarity=0.098 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHhhhcCCCcccCCCCCcCChhHHHHHHHHhhhhhCCccccccCccccccCCCCCCCcchHHHHHHHHHHH
Q 008128 328 MRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVFFAQLIL 407 (577)
Q Consensus 328 er~~r~f~~eL~~~IGp~~DVpapDvGt~~~em~~i~~~y~~~~g~~~g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l 407 (577)
+.|. .++..+.+-.|. |-=.|++. ..--.|-+.|+..... -|+ ++--.-||-=+..++-.++
T Consensus 149 defv-e~v~~~~P~fG~---InlEDf~a--p~af~il~ryr~~~~i--pvF----------nDD~qGTA~V~lAgllnAl 210 (487)
T 3nv9_A 149 DAVI-EFVQRIQHTFGA---INLEDISQ--PNCYKILDVLRESCDI--PVW----------HDDQQGTASVTLAGLLNAL 210 (487)
T ss_dssp HHHH-HHHHHHGGGCSE---EEECSCCT--THHHHHHHHHHHHCSS--CEE----------ETTTHHHHHHHHHHHHHHH
T ss_pred HHHH-HHHHHhCCCCCe---ecHhhcCC--chHHHHHHHHHhhccC--Ccc----------ccccchHHHHHHHHHHHHH
Confidence 3343 466777755443 44466654 3344566777763221 111 1222346666667788888
Q ss_pred HHcCCCCCCceEEEEecchHHHHHHHHHHHCCC--eEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCC
Q 008128 408 ADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGA--IPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYAR 485 (577)
Q Consensus 408 ~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GA--kVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~ 485 (577)
+-.+.+|+..||++.|.|..|..+|+.|...|. +=+.+.|++|.|+.... |..... -..+|.. |.... +
T Consensus 211 ki~gk~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gli~~~R~-~l~~~~-~~~~k~~------~A~~~-n 281 (487)
T 3nv9_A 211 KLVKKDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGSLHNGRE-DIKKDT-RFYRKWE------ICETT-N 281 (487)
T ss_dssp HHHTCCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEECCTTCH-HHHHCG-GGHHHHH------HHHHS-C
T ss_pred HHhCCChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEeccccccCCcc-hhhhhc-ccHHHHH------HHHhc-c
Confidence 888999999999999999999999999999998 55789999999986541 111100 0001100 00000 0
Q ss_pred ceEeCCCCccc--cccceeecCCc--ccccchhhHhhhhccCceEEEecCCC
Q 008128 486 SKYYDEAKPWN--ERCDVAFPCAS--QNEIDQSDAINLVNSGCRILVEGSNM 533 (577)
Q Consensus 486 a~~i~~~eil~--~~cDIlIPcA~--~n~It~enA~~l~~~~akiVvEgAN~ 533 (577)
.. ...++.+ ..+||||=+++ .+.+|++-++.+. .=.||.--||-
T Consensus 282 ~~--~~~~L~eav~~adVlIG~S~~~pg~ft~e~V~~Ma--~~PIIFaLSNP 329 (487)
T 3nv9_A 282 PS--KFGSIAEACVGADVLISLSTPGPGVVKAEWIKSMG--EKPIVFCCANP 329 (487)
T ss_dssp TT--CCCSHHHHHTTCSEEEECCCSSCCCCCHHHHHTSC--SSCEEEECCSS
T ss_pred cc--cCCCHHHHHhcCCEEEEecccCCCCCCHHHHHhhc--CCCEEEECCCC
Confidence 00 0011221 13599999985 4899999999983 34577777774
No 214
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=92.96 E-value=0.18 Score=50.03 Aligned_cols=123 Identities=19% Similarity=0.122 Sum_probs=72.4
Q ss_pred hHHHHHHHHHHHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCc
Q 008128 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (577)
Q Consensus 396 G~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~ 475 (577)
|+|.+.++++ . +++| ++.|.|.|++|+.++..|.+.|++-|.|.+. +.+++ .+
T Consensus 95 ~~G~~~~l~~----~--~~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR----------~~~ka---~~------- 147 (253)
T 3u62_A 95 WVGVVKSLEG----V--EVKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNR----------TIERA---KA------- 147 (253)
T ss_dssp HHHHHHHTTT----C--CCCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEES----------CHHHH---HT-------
T ss_pred HHHHHHHHHh----c--CCCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeC----------CHHHH---HH-------
Confidence 4566555543 2 5789 9999999999999999999999844677776 22232 11
Q ss_pred ccccccccCCceEeCCCCcc--ccccceeecCCccc------ccchhhHhhhhccCceEEEecCCCCCCHHHHHHHHhCC
Q 008128 476 LRDYSKTYARSKYYDEAKPW--NERCDVAFPCASQN------EIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKAN 547 (577)
Q Consensus 476 l~~y~~~~p~a~~i~~~eil--~~~cDIlIPcA~~n------~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rG 547 (577)
+. +.+. .... +++- -.++||+|-|..-. .++. ..| + ...+|++-+-+ .|+-.. ..+++|
T Consensus 148 la---~~~~-~~~~--~~~~~~~~~aDiVInatp~gm~p~~~~i~~---~~l-~-~~~~V~Divy~-~T~ll~-~A~~~G 214 (253)
T 3u62_A 148 LD---FPVK-IFSL--DQLDEVVKKAKSLFNTTSVGMKGEELPVSD---DSL-K-NLSLVYDVIYF-DTPLVV-KARKLG 214 (253)
T ss_dssp CC---SSCE-EEEG--GGHHHHHHTCSEEEECSSTTTTSCCCSCCH---HHH-T-TCSEEEECSSS-CCHHHH-HHHHHT
T ss_pred HH---HHcc-cCCH--HHHHhhhcCCCEEEECCCCCCCCCCCCCCH---HHh-C-cCCEEEEeeCC-CcHHHH-HHHHCC
Confidence 11 0111 0011 1111 23689999665421 2322 223 2 34678887766 665443 345779
Q ss_pred cE-Eecchhccc
Q 008128 548 VL-IAPAMAAGA 558 (577)
Q Consensus 548 I~-viPD~~aNA 558 (577)
+. ++|+.-.-.
T Consensus 215 ~~~~~~Gl~MLv 226 (253)
T 3u62_A 215 VKHIIKGNLMFY 226 (253)
T ss_dssp CSEEECTHHHHH
T ss_pred CcEEECCHHHHH
Confidence 88 888764433
No 215
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=92.83 E-value=0.18 Score=50.21 Aligned_cols=51 Identities=24% Similarity=0.233 Sum_probs=41.0
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 394 ATGYGLVFFAQLILADMNKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 394 ATG~GV~~~~~~~l~~~g~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
-+++|.+..++..+ +.+++|++++|.| .|-+|+.+++.|.+.|++ |.+.+.
T Consensus 100 Td~~g~~~~l~~~~---~~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~-V~i~~R 151 (287)
T 1lu9_A 100 TTAAAGVALVVKAA---GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCGR 151 (287)
T ss_dssp HHHHHHHHHHHHHT---TSCCTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred chHHHHHHHHHHhh---ccCCCCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEEC
Confidence 35677666655322 6778999999999 999999999999999999 667765
No 216
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=92.80 E-value=0.37 Score=48.92 Aligned_cols=114 Identities=11% Similarity=0.022 Sum_probs=64.8
Q ss_pred ceEEEEecchHHHHHHHHHHHCC-CeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEe-CCCCc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYG-AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAKP 494 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~G-AkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i-~~~ei 494 (577)
++|.|.|+|++|..+|..|.+.| ..| .+.|. +++-.+ +.....+..... +. .- +..+.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V-~~~dr-----~~~~~~--~~~~~~~~~~~~-----------g~-~~~s~~e~ 84 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARL-AAYDL-----RFNDPA--ASGALRARAAEL-----------GV-EPLDDVAG 84 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEE-EEECG-----GGGCTT--THHHHHHHHHHT-----------TC-EEESSGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeE-EEEeC-----CCcccc--chHHHHHHHHHC-----------CC-CCCCHHHH
Confidence 68999999999999999999999 874 46665 332111 110111111111 11 11 22222
Q ss_pred cccccceeecCCcccccchhhHhhhh---ccCceEEEecCCCC-C-CHHHHHHHHhCCcEEecc
Q 008128 495 WNERCDVAFPCASQNEIDQSDAINLV---NSGCRILVEGSNMP-C-TPEAVDVLKKANVLIAPA 553 (577)
Q Consensus 495 l~~~cDIlIPcA~~n~It~enA~~l~---~~~akiVvEgAN~p-~-T~eA~~iL~~rGI~viPD 553 (577)
-.+|||+|-|-....... .+..+. +.+ ++|+.-++.+ . +.+..+.+.++|+.++..
T Consensus 85 -~~~aDvVi~avp~~~~~~-~~~~i~~~l~~~-~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~ 145 (317)
T 4ezb_A 85 -IACADVVLSLVVGAATKA-VAASAAPHLSDE-AVFIDLNSVGPDTKALAAGAIATGKGSFVEG 145 (317)
T ss_dssp -GGGCSEEEECCCGGGHHH-HHHHHGGGCCTT-CEEEECCSCCHHHHHHHHHHHHTSSCEEEEE
T ss_pred -HhcCCEEEEecCCHHHHH-HHHHHHhhcCCC-CEEEECCCCCHHHHHHHHHHHHHcCCeEEec
Confidence 247999999877655433 234442 223 3555555443 3 344457788899887643
No 217
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=92.71 E-value=0.27 Score=49.36 Aligned_cols=79 Identities=13% Similarity=0.225 Sum_probs=55.6
Q ss_pred CceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEe-CCCCc
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAKP 494 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i-~~~ei 494 (577)
-+||+|.|+||||+.+++. . +..++++.| +..| + + +.... +-+++
T Consensus 12 ~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~------~k~g----e-------------l--------gv~a~~d~d~l 57 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD------RISK----D-------------I--------PGVVRLDEFQV 57 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH--S-CCSEEEEEC------SSCC----C-------------C--------SSSEECSSCCC
T ss_pred cceEEEECcCHHHHHHHhc--C-CcEEEEEEe------cccc----c-------------c--------CceeeCCHHHH
Confidence 4799999999999999998 4 889888887 2221 1 1 11111 23566
Q ss_pred cccccceeecCCcccccchhhHhhhhccCceEEEec
Q 008128 495 WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEG 530 (577)
Q Consensus 495 l~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEg 530 (577)
+. ++|+++.||....+.+ .+.++++.|+.+|+-.
T Consensus 58 la-~pD~VVe~A~~~av~e-~~~~iL~aG~dvv~~S 91 (253)
T 1j5p_A 58 PS-DVSTVVECASPEAVKE-YSLQILKNPVNYIIIS 91 (253)
T ss_dssp CT-TCCEEEECSCHHHHHH-HHHHHTTSSSEEEECC
T ss_pred hh-CCCEEEECCCHHHHHH-HHHHHHHCCCCEEEcC
Confidence 65 9999999998775543 3667778888888644
No 218
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=92.62 E-value=0.16 Score=52.59 Aligned_cols=110 Identities=15% Similarity=0.160 Sum_probs=68.8
Q ss_pred ceEEEEecc-hHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEe-CCCC
Q 008128 417 LRCVVSGSG-KIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAK 493 (577)
Q Consensus 417 krVaIQGfG-NVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i-~~~e 493 (577)
.||.|.|+| ++|...+..|.+. +.++++|+|. |.+++ .+..+..+ ...+ +.++
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~----------~~~~~---~~~a~~~g-----------~~~~~~~~e 58 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDP----------NEDVR---ERFGKEYG-----------IPVFATLAE 58 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECS----------CHHHH---HHHHHHHT-----------CCEESSHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeC----------CHHHH---HHHHHHcC-----------CCeECCHHH
Confidence 589999999 8998888888774 7899999997 33333 22222111 1112 2244
Q ss_pred ccc-cccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHH---HHhCCcEEe
Q 008128 494 PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDV---LKKANVLIA 551 (577)
Q Consensus 494 il~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~i---L~~rGI~vi 551 (577)
++. .++|+++-|.. +..+.+.+...++.+..+++|=-=.....+++++ .+++|+.+.
T Consensus 59 ll~~~~vD~V~i~tp-~~~H~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~ 119 (387)
T 3moi_A 59 MMQHVQMDAVYIASP-HQFHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVERAGVHLV 119 (387)
T ss_dssp HHHHSCCSEEEECSC-GGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHHHTCCEE
T ss_pred HHcCCCCCEEEEcCC-cHHHHHHHHHHHHCCCceeeeCCccCCHHHHHHHHHHHHHhCCeEE
Confidence 553 47899997664 5667788888888888899984111112344433 356676554
No 219
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=92.62 E-value=0.25 Score=47.24 Aligned_cols=93 Identities=17% Similarity=0.182 Sum_probs=55.0
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCccc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWN 496 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil~ 496 (577)
++|.|.|.|++|..+|+.|.+.|..|+.+.|. ++ +++..+. +..+. . . ..+..+. -
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r-----~~-----~~~~~l~---~~~g~-~--------~-~~~~~~~-~ 79 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSR-----GP-----ASLSSVT---DRFGA-S--------V-KAVELKD-A 79 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTT-----CG-----GGGHHHH---HHHTT-T--------E-EECCHHH-H
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECC-----CH-----HHHHHHH---HHhCC-C--------c-ccChHHH-H
Confidence 68999999999999999999999987765776 22 2332222 11111 0 0 0111111 2
Q ss_pred cccceeecCCcccccchhhHhhhhccCceEEEecCCCC
Q 008128 497 ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMP 534 (577)
Q Consensus 497 ~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p 534 (577)
.+||++|-|.....+ .+.+..|....-++|+.-+|.-
T Consensus 80 ~~aDvVilavp~~~~-~~v~~~l~~~~~~ivi~~~~g~ 116 (220)
T 4huj_A 80 LQADVVILAVPYDSI-ADIVTQVSDWGGQIVVDASNAI 116 (220)
T ss_dssp TTSSEEEEESCGGGH-HHHHTTCSCCTTCEEEECCCCB
T ss_pred hcCCEEEEeCChHHH-HHHHHHhhccCCCEEEEcCCCC
Confidence 468999988764332 3333333211345888888765
No 220
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.58 E-value=0.67 Score=43.73 Aligned_cols=112 Identities=12% Similarity=0.138 Sum_probs=62.1
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCcc-
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW- 495 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil- 495 (577)
++|+|.|+|.+|+.+|+.|.+.|..|+.+ |. |.+.+. ++.+..+ ..-+ +.++ ...+.+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vi-d~----------~~~~~~---~l~~~~~-~~~i---~gd~---~~~~~l~ 59 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVII-NK----------DRELCE---EFAKKLK-ATII---HGDG---SHKEILR 59 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEE-ES----------CHHHHH---HHHHHSS-SEEE---ESCT---TSHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEE-EC----------CHHHHH---HHHHHcC-CeEE---EcCC---CCHHHHH
Confidence 47999999999999999999999986644 44 333332 2222111 1000 0000 011122
Q ss_pred ---ccccceeecCCcccccchhhHhhhhc--cCceEEEecCCCCCCHHHHHHHHhCCcE--Eecc
Q 008128 496 ---NERCDVAFPCASQNEIDQSDAINLVN--SGCRILVEGSNMPCTPEAVDVLKKANVL--IAPA 553 (577)
Q Consensus 496 ---~~~cDIlIPcA~~n~It~enA~~l~~--~~akiVvEgAN~p~T~eA~~iL~~rGI~--viPD 553 (577)
-.+||++|-|......+...+....+ ...++|+.. |. ++-.+.|++.|+- +.|.
T Consensus 60 ~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia~~-~~---~~~~~~l~~~G~d~vi~p~ 120 (218)
T 3l4b_C 60 DAEVSKNDVVVILTPRDEVNLFIAQLVMKDFGVKRVVSLV-ND---PGNMEIFKKMGITTVLNLT 120 (218)
T ss_dssp HHTCCTTCEEEECCSCHHHHHHHHHHHHHTSCCCEEEECC-CS---GGGHHHHHHHTCEECCCHH
T ss_pred hcCcccCCEEEEecCCcHHHHHHHHHHHHHcCCCeEEEEE-eC---cchHHHHHHCCCCEEECHH
Confidence 13789999877665554333322211 235666653 33 3455678888874 4454
No 221
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=92.53 E-value=0.27 Score=52.98 Aligned_cols=113 Identities=12% Similarity=0.102 Sum_probs=67.0
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC-CCCcc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAKPW 495 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~-~~eil 495 (577)
++|.|.|.|++|+.+|..|.+.|..| .+.|. +.+++..+.+. ... + .+..... .+++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V-~v~dr----------~~~~~~~l~~~--~~~---g-----~gi~~~~~~~e~v 61 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVV-CAFNR----------TVSKVDDFLAN--EAK---G-----TKVLGAHSLEEMV 61 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCE-EEECS----------STHHHHHHHHT--TTT---T-----SSCEECSSHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeE-EEEeC----------CHHHHHHHHhc--ccc---C-----CCeEEeCCHHHHH
Confidence 57999999999999999999999984 56665 22333222210 100 0 0121111 12222
Q ss_pred c--cccceeecCCcccccchhhHhhhh---ccCceEEEecCCCCC--CHHHHHHHHhCCcEEe
Q 008128 496 N--ERCDVAFPCASQNEIDQSDAINLV---NSGCRILVEGSNMPC--TPEAVDVLKKANVLIA 551 (577)
Q Consensus 496 ~--~~cDIlIPcA~~n~It~enA~~l~---~~~akiVvEgAN~p~--T~eA~~iL~~rGI~vi 551 (577)
. .+||++|-|.....-..+.+..|. +.+ ++|+..+|... |.+-.+.|.++|+.++
T Consensus 62 ~~l~~aDvVilaVp~~~~v~~vl~~l~~~l~~g-~iII~~s~~~~~~~~~l~~~l~~~g~~~v 123 (482)
T 2pgd_A 62 SKLKKPRRIILLVKAGQAVDNFIEKLVPLLDIG-DIIIDGGNSEYRDTMRRCRDLKDKGILFV 123 (482)
T ss_dssp HHBCSSCEEEECSCTTHHHHHHHHHHHHHCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred hhccCCCEEEEeCCChHHHHHHHHHHHhhcCCC-CEEEECCCCCHHHHHHHHHHHHHcCCeEe
Confidence 2 379999988776533333333332 223 58888888864 3344577888898776
No 222
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=92.53 E-value=0.37 Score=50.35 Aligned_cols=102 Identities=14% Similarity=0.191 Sum_probs=66.3
Q ss_pred ceEEEEecchHHHHHHHHHHHCC-CeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccc-cccccC------CceE
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYG-AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRD-YSKTYA------RSKY 488 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~G-AkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~-y~~~~p------~a~~ 488 (577)
.||.|-|||-+|+.+.+.+.+.+ ..||+|.|. .+|.+.+..|+++-..+|.+.. -++.-. +.+.
T Consensus 4 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~--------~~d~~~~a~l~kyDS~hG~f~~~~v~~~~~~~l~i~Gk~ 75 (337)
T 3v1y_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVNDP--------FITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKP 75 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECT--------TSCHHHHHHHHHCCTTTCCCCSSCEEEEETTEEEETTEE
T ss_pred eEEEEECCChHHHHHHHHHHhCCCcEEEEEeCC--------CCCHHHHHHHhhhccCCCcccCceEEEcCCcEEEECCEE
Confidence 48999999999999999888764 688999875 2466666666655444455433 111000 1111
Q ss_pred e---C---CCC-cc-ccccceeecCCcccccchhhHhhhhccCceEE
Q 008128 489 Y---D---EAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCRIL 527 (577)
Q Consensus 489 i---~---~~e-il-~~~cDIlIPcA~~n~It~enA~~l~~~~akiV 527 (577)
+ . +.+ .| +..+|+++.|+ +.-.+.+-|..-++.|||-|
T Consensus 76 I~v~~e~dp~~i~w~~~gvDiVlesT-G~f~s~e~a~~hl~aGAkkV 121 (337)
T 3v1y_O 76 VTVFGIRNPDEIPWAEAGAEYVVEST-GVFTDKEKAAAHLKGGAKKV 121 (337)
T ss_dssp EEEECCSSGGGCCHHHHTCCEEEECS-SSCCSHHHHTHHHHTTCCEE
T ss_pred EEEEEecCcccCCccccCCcEEEEec-cccCCHHHHHHHHHcCCCEE
Confidence 1 1 112 25 45899999997 45567888887778888643
No 223
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=92.48 E-value=0.37 Score=43.51 Aligned_cols=30 Identities=23% Similarity=0.121 Sum_probs=25.9
Q ss_pred CceEEEEec----chHHHHHHHHHHHCCCeEEEE
Q 008128 416 GLRCVVSGS----GKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 416 GkrVaIQGf----GNVG~~aA~~L~e~GAkVVaI 445 (577)
-++|+|+|. |++|..+++.|.+.|.+|..|
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~v 46 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPV 46 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEe
Confidence 468999999 899999999999999985443
No 224
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=92.47 E-value=0.4 Score=48.36 Aligned_cols=111 Identities=14% Similarity=0.152 Sum_probs=69.3
Q ss_pred CceEEEEec-chHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCc
Q 008128 416 GLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKP 494 (577)
Q Consensus 416 GkrVaIQGf-GNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~ei 494 (577)
..||+|+|+ |+.|+..++.+.+.|.++|+..|.... |- +. . .+.- |+.. +++
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~-----g~---~~---------~-G~~v----y~sl-----~el 59 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKG-----GT---TH---------L-GLPV----FNTV-----REA 59 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCT-----TC---EE---------T-TEEE----ESSH-----HHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcc-----cc---ee---------C-Ceec----cCCH-----HHH
Confidence 468999998 999999999999999998876665310 10 00 0 0111 1111 122
Q ss_pred c-ccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCH---HHHHHHHhCCcEEe-cch
Q 008128 495 W-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTP---EAVDVLKKANVLIA-PAM 554 (577)
Q Consensus 495 l-~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~---eA~~iL~~rGI~vi-PD~ 554 (577)
. ..++|+++=|... ....+.+...++.+++++++.+-+.... +..+..+++|+.++ |..
T Consensus 60 ~~~~~~D~viI~tP~-~~~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~liGPNc 123 (288)
T 2nu8_A 60 VAATGATASVIYVPA-PFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNT 123 (288)
T ss_dssp HHHHCCCEEEECCCG-GGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEECSSC
T ss_pred hhcCCCCEEEEecCH-HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 2 2268888877644 4567777777788999877755443322 33456678899655 653
No 225
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=92.41 E-value=0.26 Score=53.64 Aligned_cols=114 Identities=11% Similarity=0.060 Sum_probs=67.6
Q ss_pred CceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHh-hcCcccccccccCCceEeC-CCC
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKS-QQRSLRDYSKTYARSKYYD-EAK 493 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~-~~g~l~~y~~~~p~a~~i~-~~e 493 (577)
..+|.|.|.|++|..+|..|.+.|..| .+.|. +.++++.+ .+ ..+ + .+....+ ..+
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V-~v~dr----------~~~~~~~l---~~~~~~---~-----~gi~~~~s~~e 67 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTV-CAYNR----------TQSKVDHF---LANEAK---G-----KSIIGATSIED 67 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCE-EEECS----------SSHHHHHH---HHTTTT---T-----SSEECCSSHHH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEE-EEEeC----------CHHHHHHH---Hccccc---C-----CCeEEeCCHHH
Confidence 358999999999999999999999985 56665 22343222 22 110 0 0111111 112
Q ss_pred ccc--cccceeecCCcccccchhhHhhhhcc--CceEEEecCCCCC--CHHHHHHHHhCCcEEe
Q 008128 494 PWN--ERCDVAFPCASQNEIDQSDAINLVNS--GCRILVEGSNMPC--TPEAVDVLKKANVLIA 551 (577)
Q Consensus 494 il~--~~cDIlIPcA~~n~It~enA~~l~~~--~akiVvEgAN~p~--T~eA~~iL~~rGI~vi 551 (577)
+.. .+||++|-|-.......+.+..|... .-++|+..+|... |.+-.+.|.++|+.++
T Consensus 68 ~v~~l~~aDvVil~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v 131 (497)
T 2p4q_A 68 FISKLKRPRKVMLLVKAGAPVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFV 131 (497)
T ss_dssp HHHTSCSSCEEEECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHhcCCCCCEEEEEcCChHHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCcee
Confidence 221 14899998877653334444444321 2358888888763 3444567888898876
No 226
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=92.35 E-value=0.65 Score=44.79 Aligned_cols=99 Identities=11% Similarity=0.061 Sum_probs=57.5
Q ss_pred ceEEEEecchHHHHHHHHHHHCC-CeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEe-CCCCc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYG-AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAKP 494 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~G-AkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i-~~~ei 494 (577)
++|.|.|.|++|...+..|.+.| .. |.+.|. +.+++.. +.+.. +.... +..+.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~-v~~~~r----------~~~~~~~---~~~~~-----------g~~~~~~~~~~ 55 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYR-IYIANR----------GAEKRER---LEKEL-----------GVETSATLPEL 55 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCE-EEEECS----------SHHHHHH---HHHHT-----------CCEEESSCCCC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCe-EEEECC----------CHHHHHH---HHHhc-----------CCEEeCCHHHH
Confidence 47999999999999999999999 77 456665 2333322 22211 12222 22344
Q ss_pred cccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHHH
Q 008128 495 WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLK 544 (577)
Q Consensus 495 l~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~ 544 (577)
. +||+++-|.... ...+....+.. +-++|+.-+|+-......+.+.
T Consensus 56 ~--~~D~vi~~v~~~-~~~~v~~~l~~-~~~ivv~~~~g~~~~~l~~~~~ 101 (263)
T 1yqg_A 56 H--SDDVLILAVKPQ-DMEAACKNIRT-NGALVLSVAAGLSVGTLSRYLG 101 (263)
T ss_dssp C--TTSEEEECSCHH-HHHHHHTTCCC-TTCEEEECCTTCCHHHHHHHTT
T ss_pred h--cCCEEEEEeCch-hHHHHHHHhcc-CCCEEEEecCCCCHHHHHHHcC
Confidence 4 899999988733 33444444422 1357777655543223334443
No 227
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=92.24 E-value=0.13 Score=50.11 Aligned_cols=111 Identities=12% Similarity=0.172 Sum_probs=51.4
Q ss_pred CCCCCHHHHHHH--HHHHHHHHhhhcCCCcccCCCCCcCChhHHHHHHHHhhhhhCCccccccCccccccCCCCCCCcch
Q 008128 319 PKGKSDNEIMRF--CQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATG 396 (577)
Q Consensus 319 P~~~s~~Eler~--~r~f~~eL~~~IGp~~DVpapDvGt~~~em~~i~~~y~~~~g~~~g~vTGKp~~~GGs~~r~eATG 396 (577)
++..++.-+.|+ +-+|..+|..- |- --++++|++-..+-.+-... |+++.-|..|.. --|
T Consensus 5 ~~~i~~~~~~Rl~~Y~r~l~~l~~~-g~--------~~iss~~l~~~~~~~~~~iR--------kdls~fg~~G~~-g~g 66 (215)
T 2vt3_A 5 QSKIPQATAKRLPLYYRFLKNLHAS-GK--------QRVSSAELSDAVKVDSATIR--------RDFSYFGALGKK-GYG 66 (215)
T ss_dssp ------CHHHHHHHHHHHHHHHHHT-TC--------CEECHHHHHHHHCCCHHHHH--------HHHHHTTCCC------
T ss_pred cCcCCHHHHHHHHHHHHHHHHHHHc-CC--------cEECHHHHHHHhCCCHHHee--------chHHHHHHhcCC-cce
Confidence 344556677775 56666666642 11 12577777766532111000 112211222210 012
Q ss_pred HHHHHHHHHHHHHcCCCCCCceEEEEecchHHHHHHHH--HHHCCCeEEEEEcC
Q 008128 397 YGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEK--LIAYGAIPVSVSDA 448 (577)
Q Consensus 397 ~GV~~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~--L~e~GAkVVaISDs 448 (577)
|=|.+-.++.-+.++.+ +.++|+|.|.|++|..+++. +...|.++|++.|.
T Consensus 67 Y~v~~L~~~~~~~lg~~-~~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~ 119 (215)
T 2vt3_A 67 YNVDYLLSFFRKTLDQD-EMTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDI 119 (215)
T ss_dssp EEHHHHHHHHHHHHHHC----CEEEECCSHHHHHHHHCC------CCEEEEEES
T ss_pred EEhHHHHHHHHHHhCcC-CCCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeC
Confidence 22322233322223322 23689999999999999994 44568999999997
No 228
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=92.19 E-value=0.35 Score=47.60 Aligned_cols=107 Identities=21% Similarity=0.217 Sum_probs=62.7
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC-CCcc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKPW 495 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~-~eil 495 (577)
++|.|.|.|++|...+..|.+.|..| .+.|. +.+++.. +++. + + ...+. ++.+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V-~~~~~----------~~~~~~~---~~~~-g-~----------~~~~~~~~~~ 59 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSL-VVSDR----------NPEAIAD---VIAA-G-A----------ETASTAKAIA 59 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEE-EEECS----------CHHHHHH---HHHT-T-C----------EECSSHHHHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEE-EEEeC----------CHHHHHH---HHHC-C-C----------eecCCHHHHH
Confidence 58999999999999999999999884 56665 2333322 2221 1 1 11111 1122
Q ss_pred ccccceeecCCcccccchhhH------hhhhccCceEEEecCCCCC--CHHHHHHHHhCCcEEe
Q 008128 496 NERCDVAFPCASQNEIDQSDA------INLVNSGCRILVEGSNMPC--TPEAVDVLKKANVLIA 551 (577)
Q Consensus 496 ~~~cDIlIPcA~~n~It~enA------~~l~~~~akiVvEgAN~p~--T~eA~~iL~~rGI~vi 551 (577)
.+||+++-|.....-..+.. ...++.+ ++|+.-+|... +.+..+.+.++|+.++
T Consensus 60 -~~~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~~-~~vv~~s~~~~~~~~~l~~~~~~~g~~~~ 121 (299)
T 1vpd_A 60 -EQCDVIITMLPNSPHVKEVALGENGIIEGAKPG-TVLIDMSSIAPLASREISDALKAKGVEML 121 (299)
T ss_dssp -HHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTT-CEEEECSCCCHHHHHHHHHHHHTTTCEEE
T ss_pred -hCCCEEEEECCCHHHHHHHHhCcchHhhcCCCC-CEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 36999999886332222221 1222334 46677777763 2344567778888776
No 229
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=91.86 E-value=0.91 Score=45.96 Aligned_cols=113 Identities=17% Similarity=0.179 Sum_probs=65.2
Q ss_pred CCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCC
Q 008128 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAK 493 (577)
Q Consensus 414 l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~e 493 (577)
-.|.+|+|.|.|.||..+++.+...|++|+++.-+ ++ +++.+++ .|. . ..+...+
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~------~~-----~~~~~~~----lGa-~---------~v~~~~~ 229 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARN------EH-----KKQDALS----MGV-K---------HFYTDPK 229 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSS------ST-----THHHHHH----TTC-S---------EEESSGG
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCC------HH-----HHHHHHh----cCC-C---------eecCCHH
Confidence 36899999999999999999999999997765432 22 2222221 121 0 0111112
Q ss_pred ccccccceeecCCcccccchhhHhhhhccCceEEEecCCC--CCC-HHHHHHHHhCCcEEec
Q 008128 494 PWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNM--PCT-PEAVDVLKKANVLIAP 552 (577)
Q Consensus 494 il~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~--p~T-~eA~~iL~~rGI~viP 552 (577)
.+...+|+++.|+..... -+.+-++++.+.++|.=|.-. +.+ .....++..+++.+..
T Consensus 230 ~~~~~~D~vid~~g~~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g 290 (348)
T 3two_A 230 QCKEELDFIISTIPTHYD-LKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYG 290 (348)
T ss_dssp GCCSCEEEEEECCCSCCC-HHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEE
T ss_pred HHhcCCCEEEECCCcHHH-HHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEE
Confidence 222389999998865533 344445556566777655432 233 2333444366666554
No 230
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=91.84 E-value=0.14 Score=44.15 Aligned_cols=32 Identities=22% Similarity=0.358 Sum_probs=27.0
Q ss_pred CCCceEEEEecchHHHHHHHHHHHCCCeEEEE
Q 008128 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 414 l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaI 445 (577)
+++++|+|.|+|.+|+.+++.|.+.|.+|+.+
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~ 35 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVLAV 35 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCEEE
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEEEE
Confidence 56789999999999999999999999986544
No 231
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.80 E-value=0.25 Score=51.57 Aligned_cols=35 Identities=23% Similarity=0.375 Sum_probs=32.1
Q ss_pred CCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
++.|++|+|.|+|.+|..+++.+...|++ |.+.|.
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~-V~~~d~ 203 (384)
T 1l7d_A 169 TVPPARVLVFGVGVAGLQAIATAKRLGAV-VMATDV 203 (384)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCE-EEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeC
Confidence 57899999999999999999999999998 677776
No 232
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=91.77 E-value=0.096 Score=46.47 Aligned_cols=32 Identities=19% Similarity=0.236 Sum_probs=29.9
Q ss_pred CceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
+++|.|.|.|++|+.+++.|.+.|++ |.+.|.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r 52 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYK-VTVAGR 52 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCE-EEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcC
Confidence 89999999999999999999999999 888886
No 233
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=91.74 E-value=0.17 Score=53.61 Aligned_cols=115 Identities=10% Similarity=0.049 Sum_probs=71.8
Q ss_pred CceEEEEec----chHHHHHHHHHHHC--CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEe
Q 008128 416 GLRCVVSGS----GKIAMHVLEKLIAY--GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (577)
Q Consensus 416 GkrVaIQGf----GNVG~~aA~~L~e~--GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i 489 (577)
-.||.|+|+ |.+|...++.|.+. ++++++|+|. +.+++ .+..+..+ + +.....
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~----------~~~~~---~~~a~~~g-~-------~~~~~~ 78 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSP----------KIETS---IATIQRLK-L-------SNATAF 78 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECS----------SHHHH---HHHHHHTT-C-------TTCEEE
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeC----------CHHHH---HHHHHHcC-C-------Ccceee
Confidence 469999999 99998888888876 7899999997 23333 22222222 1 111122
Q ss_pred C-CCCccc-cccceeecCCcccccchhhHhhhhccC------ceEEEecCCCCCC-HHHHH---HHHhCCcEEecc
Q 008128 490 D-EAKPWN-ERCDVAFPCASQNEIDQSDAINLVNSG------CRILVEGSNMPCT-PEAVD---VLKKANVLIAPA 553 (577)
Q Consensus 490 ~-~~eil~-~~cDIlIPcA~~n~It~enA~~l~~~~------akiVvEgAN~p~T-~eA~~---iL~~rGI~viPD 553 (577)
+ -++++. .++|+++-|+. +..+.+.+...++.+ ..+++|=- +-+| .++++ ..+++|+.+...
T Consensus 79 ~~~~~ll~~~~vD~V~i~tp-~~~H~~~~~~al~aG~~~~~~khVl~EKP-~a~~~~e~~~l~~~a~~~g~~~~v~ 152 (438)
T 3btv_A 79 PTLESFASSSTIDMIVIAIQ-VASHYEVVMPLLEFSKNNPNLKYLFVEWA-LACSLDQAESIYKAAAERGVQTIIS 152 (438)
T ss_dssp SSHHHHHHCSSCSEEEECSC-HHHHHHHHHHHHHHGGGCTTCCEEEEESS-CCSSHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCHHHHhcCCCCCEEEEeCC-cHHHHHHHHHHHHCCCCcccceeEEecCc-ccCCHHHHHHHHHHHHHcCCeEEEe
Confidence 2 234553 47999998764 556677777777778 78999931 1123 34443 346778766543
No 234
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=91.71 E-value=0.25 Score=51.98 Aligned_cols=125 Identities=14% Similarity=0.089 Sum_probs=71.2
Q ss_pred ceEEEEecchHHHHHHHHHHHCCC--eEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcC--cccccccccCCceEeCC-
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGA--IPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQR--SLRDYSKTYARSKYYDE- 491 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GA--kVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g--~l~~y~~~~p~a~~i~~- 491 (577)
++|+|.|.|.+|+.+++.|.+.|. ..|.++|. +.+++..+.+.....+ .+... .. + +++
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r----------~~~~~~~la~~l~~~~~~~~~~~--~~-D---~~d~ 65 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASR----------TLSKCQEIAQSIKAKGYGEIDIT--TV-D---ADSI 65 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEES----------CHHHHHHHHHHHHHTTCCCCEEE--EC-C---TTCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEEC----------CHHHHHHHHHHhhhhcCCceEEE--Ee-c---CCCH
Confidence 489999999999999999999884 24677776 2344433322111110 11100 00 0 011
Q ss_pred ---CCcc-ccccceeecCCcccccchhhHhhhhccCceEEEecCCC--CCC--------HHHHHHHHhCCcEEecchhcc
Q 008128 492 ---AKPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNM--PCT--------PEAVDVLKKANVLIAPAMAAG 557 (577)
Q Consensus 492 ---~eil-~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~--p~T--------~eA~~iL~~rGI~viPD~~aN 557 (577)
.+++ ..++|++|-||.... +...+...++.++.+|- -++. |.. .+..+..+++|+.+++..-..
T Consensus 66 ~~l~~~l~~~~~DvVin~ag~~~-~~~v~~a~l~~g~~vvD-~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~G~~ 143 (405)
T 4ina_A 66 EELVALINEVKPQIVLNIALPYQ-DLTIMEACLRTGVPYLD-TANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGSGFD 143 (405)
T ss_dssp HHHHHHHHHHCCSEEEECSCGGG-HHHHHHHHHHHTCCEEE-SSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECCBTT
T ss_pred HHHHHHHHhhCCCEEEECCCccc-ChHHHHHHHHhCCCEEE-ecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcCCCC
Confidence 1122 225899999987543 44555555567888774 3332 211 134566788899888776544
Q ss_pred cc
Q 008128 558 AG 559 (577)
Q Consensus 558 AG 559 (577)
.|
T Consensus 144 PG 145 (405)
T 4ina_A 144 PG 145 (405)
T ss_dssp TB
T ss_pred cc
Confidence 43
No 235
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=91.41 E-value=0.15 Score=52.54 Aligned_cols=34 Identities=21% Similarity=0.408 Sum_probs=30.8
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEE
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVS 444 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVa 444 (577)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++
T Consensus 141 ~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~ 174 (333)
T 1j4a_A 141 GREVRDQVVGVVGTGHIGQVFMQIMEGFGAKVIT 174 (333)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred cccCCCCEEEEEccCHHHHHHHHHHHHCCCEEEE
Confidence 3578999999999999999999999999999754
No 236
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.38 E-value=1 Score=45.27 Aligned_cols=112 Identities=17% Similarity=0.132 Sum_probs=62.3
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcC-cccccccccC---Cc-eEeCC
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQR-SLRDYSKTYA---RS-KYYDE 491 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g-~l~~y~~~~p---~a-~~i~~ 491 (577)
++|.|.|.|++|..+|..|.+.|..| .+.|. +.+.+. .+++..+ .+.+. ..+ .. ...+.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V-~~~~r----------~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 68 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSV-LAWDI----------DAQRIK---EIQDRGAIIAEGP--GLAGTAHPDLLTSD 68 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEE-EEECS----------CHHHHH---HHHHHTSEEEESS--SCCEEECCSEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEE-EEEeC----------CHHHHH---HHHhcCCeEEecc--ccccccccceecCC
Confidence 68999999999999999999999884 45565 223332 2222211 11100 000 00 11111
Q ss_pred -CCccccccceeecCCcccccchhhHhhh---hccCceEEEecCC-CCCCHHHHHHHHhCC
Q 008128 492 -AKPWNERCDVAFPCASQNEIDQSDAINL---VNSGCRILVEGSN-MPCTPEAVDVLKKAN 547 (577)
Q Consensus 492 -~eil~~~cDIlIPcA~~n~It~enA~~l---~~~~akiVvEgAN-~p~T~eA~~iL~~rG 547 (577)
++. -.+||++|-|...... .+.+..+ ++.++.+|.. .| .+-+.+..+.|.+.|
T Consensus 69 ~~~~-~~~~D~vi~~v~~~~~-~~~~~~l~~~l~~~~~vv~~-~~~~~~~~~~~~~l~~~~ 126 (359)
T 1bg6_A 69 IGLA-VKDADVILIVVPAIHH-ASIAANIASYISEGQLIILN-PGATGGALEFRKILRENG 126 (359)
T ss_dssp HHHH-HTTCSEEEECSCGGGH-HHHHHHHGGGCCTTCEEEES-SCCSSHHHHHHHHHHHTT
T ss_pred HHHH-HhcCCEEEEeCCchHH-HHHHHHHHHhCCCCCEEEEc-CCCchHHHHHHHHHHhcC
Confidence 111 1379999998876654 4444444 2345666666 44 444445456677765
No 237
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.37 E-value=0.49 Score=50.17 Aligned_cols=106 Identities=15% Similarity=0.240 Sum_probs=64.3
Q ss_pred CceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCcc
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW 495 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil 495 (577)
+.+|+|.|+|.+|+.+++.|.+.|..|+. .|. |.+.+. ..++ .+ +.-+ +.++ +..++|
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvv-Id~----------d~~~v~---~~~~-~g-~~vi---~GDa---t~~~~L 61 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVV-LDH----------DPDHIE---TLRK-FG-MKVF---YGDA---TRMDLL 61 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEE-EEC----------CHHHHH---HHHH-TT-CCCE---ESCT---TCHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEE-EEC----------CHHHHH---HHHh-CC-CeEE---EcCC---CCHHHH
Confidence 45799999999999999999999998654 454 333432 2221 11 1100 0111 112233
Q ss_pred ----ccccceeecCCcccccch---hhHhhhhccCceEEEecCCCCCCHHHHHHHHhCCc
Q 008128 496 ----NERCDVAFPCASQNEIDQ---SDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANV 548 (577)
Q Consensus 496 ----~~~cDIlIPcA~~n~It~---enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI 548 (577)
-..||++|-|....+.+. ..|+++ ....++|+-..| ++-...|.+.|+
T Consensus 62 ~~agi~~A~~viv~~~~~~~n~~i~~~ar~~-~p~~~Iiara~~----~~~~~~L~~~Ga 116 (413)
T 3l9w_A 62 ESAGAAKAEVLINAIDDPQTNLQLTEMVKEH-FPHLQIIARARD----VDHYIRLRQAGV 116 (413)
T ss_dssp HHTTTTTCSEEEECCSSHHHHHHHHHHHHHH-CTTCEEEEEESS----HHHHHHHHHTTC
T ss_pred HhcCCCccCEEEECCCChHHHHHHHHHHHHh-CCCCeEEEEECC----HHHHHHHHHCCC
Confidence 137899988876554443 333333 234689987654 566778899987
No 238
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=91.19 E-value=0.5 Score=47.76 Aligned_cols=117 Identities=15% Similarity=0.243 Sum_probs=69.0
Q ss_pred CceEEEEec-chHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCc
Q 008128 416 GLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKP 494 (577)
Q Consensus 416 GkrVaIQGf-GNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~ei 494 (577)
.+||+|+|+ |+.|+..++.+.+.|.++|+..+.... |- ++ ..+.- |+.. +++
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~-----g~---~i----------~G~~v----y~sl-----~el 59 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKG-----GM---EV----------LGVPV----YDTV-----KEA 59 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCT-----TC---EE----------TTEEE----ESSH-----HHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCC-----Cc---eE----------CCEEe----eCCH-----HHH
Confidence 478999997 999999999999999997765554220 00 00 00111 1111 111
Q ss_pred c-ccccceeecCCcccccchhhHhhhhccCceEEEecC-CCCCCH--HHHHHHHhCCcEEe-cchhccccceeeh
Q 008128 495 W-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGS-NMPCTP--EAVDVLKKANVLIA-PAMAAGAGGVRYS 564 (577)
Q Consensus 495 l-~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgA-N~p~T~--eA~~iL~~rGI~vi-PD~~aNAGGVivS 564 (577)
. ..++|+++-|... ....+.+...++.+++.++..+ ..+.+. +..+..++.|+.++ | |+-|++..
T Consensus 60 ~~~~~~Dv~Ii~vp~-~~~~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi~vigP----Nc~Gii~~ 129 (288)
T 1oi7_A 60 VAHHEVDASIIFVPA-PAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGSRLIGG----NCPGIISA 129 (288)
T ss_dssp HHHSCCSEEEECCCH-HHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEEES----SSCEEEET
T ss_pred hhcCCCCEEEEecCH-HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEeC----CCCeEEcC
Confidence 1 1267888866543 3456777777777999555444 333322 44566788899655 6 34555543
No 239
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=91.07 E-value=0.24 Score=44.23 Aligned_cols=107 Identities=12% Similarity=0.181 Sum_probs=61.0
Q ss_pred CCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC----
Q 008128 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD---- 490 (577)
Q Consensus 415 ~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~---- 490 (577)
..++|+|.|+|.+|+.+++.|.+.|..|+.|... + .+.+..+.+... .+ ..++.
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~------~----~~~~~~~~~~~~-~~-----------~~~i~gd~~ 59 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNL------P----EDDIKQLEQRLG-DN-----------ADVIPGDSN 59 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC------C----HHHHHHHHHHHC-TT-----------CEEEESCTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC------C----hHHHHHHHHhhc-CC-----------CeEEEcCCC
Confidence 3568999999999999999999999997655431 1 122211221111 01 11111
Q ss_pred CCCcc----ccccceeecCCcccccch---hhHhhhhccCceEEEecCCCCCCHHHHHHHHhCCc
Q 008128 491 EAKPW----NERCDVAFPCASQNEIDQ---SDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANV 548 (577)
Q Consensus 491 ~~eil----~~~cDIlIPcA~~n~It~---enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI 548 (577)
..+.| -.+||+++-|......|. ..++++ ....++|+.. |.+ +..+.|++.|+
T Consensus 60 ~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~-~~~~~ii~~~-~~~---~~~~~l~~~G~ 119 (153)
T 1id1_A 60 DSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDM-SSDVKTVLAV-SDS---KNLNKIKMVHP 119 (153)
T ss_dssp SHHHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHH-TSSSCEEEEC-SSG---GGHHHHHTTCC
T ss_pred CHHHHHHcChhhCCEEEEecCChHHHHHHHHHHHHH-CCCCEEEEEE-CCH---HHHHHHHHcCC
Confidence 11122 137899998876554443 334443 1235777754 333 44567888887
No 240
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.01 E-value=0.56 Score=46.78 Aligned_cols=108 Identities=16% Similarity=0.262 Sum_probs=61.1
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC-CCcc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKPW 495 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~-~eil 495 (577)
++|.|.|.|++|..+|..|.+.|..| .+.|. ++ +++..+. + .+ ....+. .+.+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V-~~~~~-----~~-----~~~~~~~---~-~g-----------~~~~~~~~~~~ 84 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTV-TVWNR-----TA-----EKCDLFI---Q-EG-----------ARLGRTPAEVV 84 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCE-EEECS-----SG-----GGGHHHH---H-TT-----------CEECSCHHHHH
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEE-EEEeC-----CH-----HHHHHHH---H-cC-----------CEEcCCHHHHH
Confidence 68999999999999999999999884 56665 22 2222222 1 11 111111 1111
Q ss_pred ccccceeecCCcccccchhhHhhh------hccCceEEEecCCCCC--CHHHHHHHHhCCcEEec
Q 008128 496 NERCDVAFPCASQNEIDQSDAINL------VNSGCRILVEGSNMPC--TPEAVDVLKKANVLIAP 552 (577)
Q Consensus 496 ~~~cDIlIPcA~~n~It~enA~~l------~~~~akiVvEgAN~p~--T~eA~~iL~~rGI~viP 552 (577)
.+||+++-|........+....+ +..+ ++|+..+|... ..+..+.+.++|+.++.
T Consensus 85 -~~~DvVi~av~~~~~~~~v~~~~~~~~~~l~~~-~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~ 147 (316)
T 2uyy_A 85 -STCDITFACVSDPKAAKDLVLGPSGVLQGIRPG-KCYVDMSTVDADTVTELAQVIVSRGGRFLE 147 (316)
T ss_dssp -HHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred -hcCCEEEEeCCCHHHHHHHHcCchhHhhcCCCC-CEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 37999999887433223322211 1223 46776777542 22334566677877763
No 241
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=90.97 E-value=0.52 Score=46.30 Aligned_cols=31 Identities=16% Similarity=0.201 Sum_probs=26.5
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
++|.|.|+|++|..+++.|.+.|..| .+.|.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V-~~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPL-IIYDV 31 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCE-EEECS
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEE-EEEeC
Confidence 37999999999999999999999884 45565
No 242
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.82 E-value=1.8 Score=43.92 Aligned_cols=94 Identities=14% Similarity=0.017 Sum_probs=54.5
Q ss_pred CCCceEEEEecchHHHHHHHHHHHCCC--eEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC-
Q 008128 414 LKGLRCVVSGSGKIAMHVLEKLIAYGA--IPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD- 490 (577)
Q Consensus 414 l~GkrVaIQGfGNVG~~aA~~L~e~GA--kVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~- 490 (577)
+.-++|.|.|.|++|..+|+.|.+.|. .| .+.|. +.+.+.. .+ +.|.+. ...+
T Consensus 31 ~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V-~~~dr----------~~~~~~~---a~-~~G~~~---------~~~~~ 86 (314)
T 3ggo_A 31 LSMQNVLIVGVGFMGGSFAKSLRRSGFKGKI-YGYDI----------NPESISK---AV-DLGIID---------EGTTS 86 (314)
T ss_dssp CSCSEEEEESCSHHHHHHHHHHHHTTCCSEE-EEECS----------CHHHHHH---HH-HTTSCS---------EEESC
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCCCEE-EEEEC----------CHHHHHH---HH-HCCCcc---------hhcCC
Confidence 345799999999999999999999998 64 45565 2233322 11 122211 1112
Q ss_pred CCCccccccceeecCCcccccchhhHhhhh---ccCceEEEecCCC
Q 008128 491 EAKPWNERCDVAFPCASQNEIDQSDAINLV---NSGCRILVEGSNM 533 (577)
Q Consensus 491 ~~eil~~~cDIlIPcA~~n~It~enA~~l~---~~~akiVvEgAN~ 533 (577)
.++..-.+||++|-|.....+. +....+. +.++ +|+.-+..
T Consensus 87 ~~~~~~~~aDvVilavp~~~~~-~vl~~l~~~l~~~~-iv~d~~Sv 130 (314)
T 3ggo_A 87 IAKVEDFSPDFVMLSSPVRTFR-EIAKKLSYILSEDA-TVTDQGSV 130 (314)
T ss_dssp TTGGGGGCCSEEEECSCGGGHH-HHHHHHHHHSCTTC-EEEECCSC
T ss_pred HHHHhhccCCEEEEeCCHHHHH-HHHHHHhhccCCCc-EEEECCCC
Confidence 2221235799999998876543 3333332 3344 66654433
No 243
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=90.81 E-value=0.29 Score=50.88 Aligned_cols=116 Identities=14% Similarity=0.133 Sum_probs=68.5
Q ss_pred CCceEEEEecch---HHHHHHHHHHHCC-CeEEE-EEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEe
Q 008128 415 KGLRCVVSGSGK---IAMHVLEKLIAYG-AIPVS-VSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (577)
Q Consensus 415 ~GkrVaIQGfGN---VG~~aA~~L~e~G-AkVVa-ISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i 489 (577)
+-.||.|.|+|. +|..-+..+...+ +.+++ |+|. |.++. .+..+..+ + |.....
T Consensus 11 ~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~----------~~~~a---~~~a~~~g-~-------~~~~~~ 69 (398)
T 3dty_A 11 QPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDI----------DPIRG---SAFGEQLG-V-------DSERCY 69 (398)
T ss_dssp SCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCS----------SHHHH---HHHHHHTT-C-------CGGGBC
T ss_pred CcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCC----------CHHHH---HHHHHHhC-C-------Ccceee
Confidence 456999999999 9987777776654 78887 7886 33333 22222222 1 100111
Q ss_pred C-CCCccc------cccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHH---HHhCCcEEec
Q 008128 490 D-EAKPWN------ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDV---LKKANVLIAP 552 (577)
Q Consensus 490 ~-~~eil~------~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~i---L~~rGI~viP 552 (577)
+ -++++. .++|+++=|+ .+..+.+.+...++.+..++||=-=.....+++++ .+++|+.+.-
T Consensus 70 ~~~~~ll~~~~~~~~~vD~V~i~t-p~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v 141 (398)
T 3dty_A 70 ADYLSMFEQEARRADGIQAVSIAT-PNGTHYSITKAALEAGLHVVCEKPLCFTVEQAENLRELSHKHNRIVGV 141 (398)
T ss_dssp SSHHHHHHHHTTCTTCCSEEEEES-CGGGHHHHHHHHHHTTCEEEECSCSCSCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCHHHHHhcccccCCCCCEEEECC-CcHHHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCeEEE
Confidence 1 134443 2488888544 56677888888888888899884211122344433 3567765543
No 244
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=90.72 E-value=0.6 Score=45.12 Aligned_cols=101 Identities=12% Similarity=0.094 Sum_probs=59.4
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC-CCCcc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAKPW 495 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~-~~eil 495 (577)
++|.|.|.|++|...++.|.+.|.. |.+.|. +.+++.. +.+..+ + ...+ ..+.+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~-v~~~~~----------~~~~~~~---~~~~~g-~----------~~~~~~~~~~ 58 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHE-LIISGS----------SLERSKE---IAEQLA-L----------PYAMSHQDLI 58 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCE-EEEECS----------SHHHHHH---HHHHHT-C----------CBCSSHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCe-EEEECC----------CHHHHHH---HHHHcC-C----------EeeCCHHHHH
Confidence 5899999999999999999998865 567775 2333322 221111 1 1111 11222
Q ss_pred ccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHHHhCC
Q 008128 496 NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKAN 547 (577)
Q Consensus 496 ~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rG 547 (577)
.+||+++-|... ....+-+..+. .+ ++|++-.+.-...+..+.+ .++
T Consensus 59 -~~~D~Vi~~v~~-~~~~~v~~~l~-~~-~~vv~~~~~~~~~~l~~~~-~~~ 105 (259)
T 2ahr_A 59 -DQVDLVILGIKP-QLFETVLKPLH-FK-QPIISMAAGISLQRLATFV-GQD 105 (259)
T ss_dssp -HTCSEEEECSCG-GGHHHHHTTSC-CC-SCEEECCTTCCHHHHHHHH-CTT
T ss_pred -hcCCEEEEEeCc-HhHHHHHHHhc-cC-CEEEEeCCCCCHHHHHHhc-CCC
Confidence 379999999874 34444455542 23 4888877654433444444 344
No 245
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=90.65 E-value=0.46 Score=51.22 Aligned_cols=111 Identities=11% Similarity=0.034 Sum_probs=70.7
Q ss_pred CceEEEEec----chHHHHHHHHHHHC--CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEe
Q 008128 416 GLRCVVSGS----GKIAMHVLEKLIAY--GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (577)
Q Consensus 416 GkrVaIQGf----GNVG~~aA~~L~e~--GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i 489 (577)
-.||.|+|+ |.+|...++.|.+. ++++++|+|. |.+++ .+..+..+ + +....+
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~----------~~~~a---~~~a~~~g-~-------~~~~~~ 97 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNP----------TLKSS---LQTIEQLQ-L-------KHATGF 97 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECS----------CHHHH---HHHHHHTT-C-------TTCEEE
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeC----------CHHHH---HHHHHHcC-C-------Ccceee
Confidence 368999999 99999888888875 7899999997 23333 22222222 1 111222
Q ss_pred C-CCCccc-cccceeecCCcccccchhhHhhhhccC------ceEEEecCCCCC--C-HHHHHH---HHhCC-cEEe
Q 008128 490 D-EAKPWN-ERCDVAFPCASQNEIDQSDAINLVNSG------CRILVEGSNMPC--T-PEAVDV---LKKAN-VLIA 551 (577)
Q Consensus 490 ~-~~eil~-~~cDIlIPcA~~n~It~enA~~l~~~~------akiVvEgAN~p~--T-~eA~~i---L~~rG-I~vi 551 (577)
+ -++++. .++|+++-|+. +..+.+.+...++.+ ..++||= |+ | .|++++ .+++| +.+.
T Consensus 98 ~d~~ell~~~~vD~V~I~tp-~~~H~~~~~~al~aG~~~~~~khVl~EK---Pla~~~~ea~~l~~~a~~~g~~~~~ 170 (479)
T 2nvw_A 98 DSLESFAQYKDIDMIVVSVK-VPEHYEVVKNILEHSSQNLNLRYLYVEW---ALAASVQQAEELYSISQQRANLQTI 170 (479)
T ss_dssp SCHHHHHHCTTCSEEEECSC-HHHHHHHHHHHHHHSSSCSSCCEEEEES---SSSSSHHHHHHHHHHHHTCTTCEEE
T ss_pred CCHHHHhcCCCCCEEEEcCC-cHHHHHHHHHHHHCCCCcCCceeEEEeC---CCcCCHHHHHHHHHHHHHcCCeEEE
Confidence 2 234553 57899998775 556677777777778 7799983 53 3 344433 36678 6654
No 246
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=90.59 E-value=0.1 Score=50.73 Aligned_cols=165 Identities=15% Similarity=0.166 Sum_probs=86.3
Q ss_pred CHHHHHHH--HHHHHHHHhhhcCCCcccCCCCCcCChhHHHHHHHHhhhhhCCccccccCccccccCCCCCCCcchHHHH
Q 008128 323 SDNEIMRF--CQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLV 400 (577)
Q Consensus 323 s~~Eler~--~r~f~~eL~~~IGp~~DVpapDvGt~~~em~~i~~~y~~~~g~~~g~vTGKp~~~GGs~~r~eATG~GV~ 400 (577)
++.-+.|+ +-+|..+|..- |- --++++|++-..+-.+-... |+++.-|..|.. --||=|.
T Consensus 4 ~~~~~~Rl~~y~r~l~~l~~~-g~--------~~iss~~l~~~~~~~~~~iR--------kdls~~g~~G~~-g~gY~v~ 65 (211)
T 2dt5_A 4 PEAAISRLITYLRILEELEAQ-GV--------HRTSSEQLGGLAQVTAFQVR--------KDLSYFGSYGTR-GVGYTVP 65 (211)
T ss_dssp CHHHHHHHHHHHHHHHHHHHT-TC--------CEECHHHHHHHHTSCHHHHH--------HHHHHTTCCCCT-TTCEEHH
T ss_pred CHHHHHHHHHHHHHHHHHHHc-CC--------cEECHHHHHHHhCCCHHHee--------chHHHHHHhcCC-ceeEEhH
Confidence 56677775 56666666642 11 12577787776542211000 111111222111 1133344
Q ss_pred HHHHHHHHHcCCCCCCceEEEEecchHHHHHHHH--HHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccc
Q 008128 401 FFAQLILADMNKELKGLRCVVSGSGKIAMHVLEK--LIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRD 478 (577)
Q Consensus 401 ~~~~~~l~~~g~~l~GkrVaIQGfGNVG~~aA~~--L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~ 478 (577)
+-.++.-+.++.+ +.++|+|.|.|+.|...++. ... |.++|++.|. ||+-.. ..+.+
T Consensus 66 ~L~~~~~~~lg~~-~~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~-----dp~k~g--------------~~i~g 124 (211)
T 2dt5_A 66 VLKRELRHILGLN-RKWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDV-----DPEKVG--------------RPVRG 124 (211)
T ss_dssp HHHHHHHHHHTTT-SCEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEES-----CTTTTT--------------CEETT
T ss_pred HHHHHHHHHhCcC-CCCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeC-----CHHHHh--------------hhhcC
Confidence 3344443334543 34789999999999999985 234 8999999997 443110 01111
Q ss_pred cccccCCceEeCC-CCcc-ccccceeecCCcccccchhhHhhhhccCceEEEecCCC
Q 008128 479 YSKTYARSKYYDE-AKPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNM 533 (577)
Q Consensus 479 y~~~~p~a~~i~~-~eil-~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~ 533 (577)
+ | ....+. ++++ . ++|+++-|..... ..+-+..+.+.+++.|..=+-.
T Consensus 125 v----~-V~~~~dl~ell~~-~ID~ViIA~Ps~~-~~ei~~~l~~aGi~~Ilnf~P~ 174 (211)
T 2dt5_A 125 G----V-IEHVDLLPQRVPG-RIEIALLTVPREA-AQKAADLLVAAGIKGILNFAPV 174 (211)
T ss_dssp E----E-EEEGGGHHHHSTT-TCCEEEECSCHHH-HHHHHHHHHHHTCCEEEECSSS
T ss_pred C----e-eecHHhHHHHHHc-CCCEEEEeCCchh-HHHHHHHHHHcCCCEEEECCcc
Confidence 1 1 001111 2233 4 7898888876543 3466677777788866543333
No 247
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=90.35 E-value=0.38 Score=48.18 Aligned_cols=103 Identities=17% Similarity=0.214 Sum_probs=65.3
Q ss_pred CceEEEEecchHHHHHHHHHHH----CCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIA----YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e----~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~ 491 (577)
-.||.|.|+|++|..-++.|.+ .+.++++|+|.+- .. + .| +..+.+-
T Consensus 7 ~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~-----~a----~---------------~~-----g~~~~~~ 57 (294)
T 1lc0_A 7 KFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRE-----LG----S---------------LD-----EVRQISL 57 (294)
T ss_dssp SEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSC-----CC----E---------------ET-----TEEBCCH
T ss_pred cceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchH-----HH----H---------------Hc-----CCCCCCH
Confidence 3589999999999987777754 4789999999731 00 0 00 1111112
Q ss_pred CCccc-cccceeecCCcccccchhhHhhhhccCceEEEecCCCCC--C-HHHHHHH---HhCCcEEe
Q 008128 492 AKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC--T-PEAVDVL---KKANVLIA 551 (577)
Q Consensus 492 ~eil~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~--T-~eA~~iL---~~rGI~vi 551 (577)
++++. .++|+++-|+. +..+.+.+...++.|..+++|= |+ | .|+++++ +++|+.+.
T Consensus 58 ~ell~~~~vD~V~i~tp-~~~H~~~~~~al~aGkhVl~EK---Pla~~~~ea~~l~~~a~~~g~~~~ 120 (294)
T 1lc0_A 58 EDALRSQEIDVAYICSE-SSSHEDYIRQFLQAGKHVLVEY---PMTLSFAAAQELWELAAQKGRVLH 120 (294)
T ss_dssp HHHHHCSSEEEEEECSC-GGGHHHHHHHHHHTTCEEEEES---CSCSCHHHHHHHHHHHHHTTCCEE
T ss_pred HHHhcCCCCCEEEEeCC-cHhHHHHHHHHHHCCCcEEEeC---CCCCCHHHHHHHHHHHHHhCCEEE
Confidence 33442 46888888764 5677888888888888888883 53 3 3444333 56676544
No 248
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=89.93 E-value=0.56 Score=49.25 Aligned_cols=117 Identities=14% Similarity=0.097 Sum_probs=69.0
Q ss_pred CCCceEEEEecch---HHHHHHHHHHHCC-CeEEE-EEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceE
Q 008128 414 LKGLRCVVSGSGK---IAMHVLEKLIAYG-AIPVS-VSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY 488 (577)
Q Consensus 414 l~GkrVaIQGfGN---VG~~aA~~L~e~G-AkVVa-ISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~ 488 (577)
.+-.||.|.|+|+ +|..-+..+...+ .++|+ |+|. |.+++ .+..+..+ + |....
T Consensus 35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~----------~~~~a---~~~a~~~g-~-------~~~~~ 93 (417)
T 3v5n_A 35 QKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSS----------TPEKA---EASGRELG-L-------DPSRV 93 (417)
T ss_dssp CCCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCS----------SHHHH---HHHHHHHT-C-------CGGGB
T ss_pred CCcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCC----------CHHHH---HHHHHHcC-C-------Ccccc
Confidence 3456999999999 9987777776655 78886 8887 33333 22222211 1 10011
Q ss_pred e-CCCCccc------cccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHH---HHhCCcEEec
Q 008128 489 Y-DEAKPWN------ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDV---LKKANVLIAP 552 (577)
Q Consensus 489 i-~~~eil~------~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~i---L~~rGI~viP 552 (577)
. +-++++. .++|+++=|+ .+..+.+.+...++.+..++||=-=.....+++++ .+++|+.+.-
T Consensus 94 ~~~~~~ll~~~~~~~~~vD~V~I~t-p~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v 166 (417)
T 3v5n_A 94 YSDFKEMAIREAKLKNGIEAVAIVT-PNHVHYAAAKEFLKRGIHVICDKPLTSTLADAKKLKKAADESDALFVL 166 (417)
T ss_dssp CSCHHHHHHHHHHCTTCCSEEEECS-CTTSHHHHHHHHHTTTCEEEEESSSCSSHHHHHHHHHHHHHCSSCEEE
T ss_pred cCCHHHHHhcccccCCCCcEEEECC-CcHHHHHHHHHHHhCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 1 1234553 3589888655 56678888888888899999994111122355443 3566765543
No 249
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=89.88 E-value=0.68 Score=47.88 Aligned_cols=101 Identities=14% Similarity=0.160 Sum_probs=59.5
Q ss_pred ceEEEEe-cchHHHHHHHHHHHCC-CeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCccc-----ccccccCCceEe
Q 008128 417 LRCVVSG-SGKIAMHVLEKLIAYG-AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLR-----DYSKTYARSKYY 489 (577)
Q Consensus 417 krVaIQG-fGNVG~~aA~~L~e~G-AkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~-----~y~~~~p~a~~i 489 (577)
.+|+|.| +|.+|+.+++.|.+.. ..|+++.++. ...|-.+..+ .+.+. .-.... .....
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~----~~~g~~~~~~---------~~~~~~~~~~~~~~~~-~~~~~ 74 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASE----RSAGKKYKDA---------CYWFQDRDIPENIKDM-VVIPT 74 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECT----TTTTSBHHHH---------SCCCCSSCCCHHHHTC-BCEES
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEccc----ccccccHHHh---------cccccccccccCceee-EEEeC
Confidence 5899999 9999999999998754 6888887531 1122222111 11110 000000 01111
Q ss_pred CCCCccccccceeecCCcccccchhhHhhhhccCceEEEecCC
Q 008128 490 DEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (577)
Q Consensus 490 ~~~eil~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (577)
+.+++...+||+++-|+. ...+.+.+..+++.++++|--.+-
T Consensus 75 ~~~~~~~~~~DvV~~atp-~~~~~~~a~~~~~aG~~VId~s~~ 116 (354)
T 1ys4_A 75 DPKHEEFEDVDIVFSALP-SDLAKKFEPEFAKEGKLIFSNASA 116 (354)
T ss_dssp CTTSGGGTTCCEEEECCC-HHHHHHHHHHHHHTTCEEEECCST
T ss_pred CHHHHhcCCCCEEEECCC-chHHHHHHHHHHHCCCEEEECCch
Confidence 223322348999998864 456778888888889997765543
No 250
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=89.81 E-value=0.34 Score=45.74 Aligned_cols=36 Identities=33% Similarity=0.541 Sum_probs=28.9
Q ss_pred CCCCCceEEEEec-chHHHHHHHHHHHCCCeEEEEEc
Q 008128 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aA~~L~e~GAkVVaISD 447 (577)
.+++|++|+|.|. |.+|+++++.|.+.|++|++++-
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R 53 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVR 53 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEEC
Confidence 4688999999995 99999999999999999776653
No 251
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=89.65 E-value=0.35 Score=47.00 Aligned_cols=38 Identities=18% Similarity=0.327 Sum_probs=28.8
Q ss_pred cCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 410 MNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 410 ~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
...++.+++|.|.|+|++|..+|+.|.+.|..| .+.|.
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V-~~~~r 50 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADLGHEV-TIGTR 50 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEE-EEEES
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHCCCEE-EEEeC
Confidence 356788999999999999999999999999985 45565
No 252
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=89.61 E-value=1.8 Score=44.21 Aligned_cols=33 Identities=36% Similarity=0.403 Sum_probs=29.7
Q ss_pred CCCceEEEEecchHHHHHHHHHHHCCCeEEEEE
Q 008128 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 414 l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaIS 446 (577)
-.|.+|+|.|.|.||..+++.+...|++|+++.
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~ 220 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGAEVIVTS 220 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEe
Confidence 368999999999999999999999999987664
No 253
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=89.60 E-value=0.9 Score=47.82 Aligned_cols=103 Identities=16% Similarity=0.229 Sum_probs=63.9
Q ss_pred ceEEEEecchHHHHHHHHHHH----C-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccc--------c
Q 008128 417 LRCVVSGSGKIAMHVLEKLIA----Y-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT--------Y 483 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e----~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~--------~ 483 (577)
.||.|-|||-+|+.+.+.|.+ . ...||+|.|. -.|.+.+..|+++-..+|.+...++. -
T Consensus 3 ~kv~INGFGrIGr~v~Ra~~~~~~~~~~~~vvaINd~--------~~d~~~~a~llkyDS~hG~f~~~v~~~~~~~~~~~ 74 (359)
T 3ids_C 3 IKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDM--------NTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAK 74 (359)
T ss_dssp EEEEEECTTHHHHHHHHHHHHTTCBTTTEEEEEEECS--------SCCHHHHHHHHHEETTTEECSSCEEEECSCTTSSS
T ss_pred eEEEEECCChHHHHHHHHhHHHHhcCCCcEEEEEecC--------CCCHHHHHHHhcccCCCCCEeeEEEecccccccCC
Confidence 489999999999999998433 2 4688999985 24666665565553344443321111 0
Q ss_pred C-----Cce---Ee----CCCC-cc-ccccceeecCCcccccchhhHhhhhccCce-EEE
Q 008128 484 A-----RSK---YY----DEAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCR-ILV 528 (577)
Q Consensus 484 p-----~a~---~i----~~~e-il-~~~cDIlIPcA~~n~It~enA~~l~~~~ak-iVv 528 (577)
. +.+ .. ++++ .| +..+|+++.|+. .-.+.+-|..-++.||| +|+
T Consensus 75 ~~~l~inGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG-~f~s~e~A~~hl~aGAkkViI 133 (359)
T 3ids_C 75 DDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTG-LFTAKAAAEGHLRGGARKVVI 133 (359)
T ss_dssp CCEEEETTEEEEECCCCSSTTTSCHHHHTCCEEEECSS-SCCBHHHHTHHHHTTCCEEEE
T ss_pred CCEEEECCEEEEEEEccCCcccCCccccCccEEEEecc-ccCCHHHHHHHHHcCCCEEEE
Confidence 0 111 11 1222 35 468999999874 45678888777788886 444
No 254
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=89.52 E-value=0.67 Score=48.69 Aligned_cols=124 Identities=15% Similarity=0.155 Sum_probs=66.6
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcc-----cccccccC-CceEeC
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSL-----RDYSKTYA-RSKYYD 490 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l-----~~y~~~~p-~a~~i~ 490 (577)
++|+|.|.|.||..+|..|.+ |..|+ +.|. |.+++. .+++....+ ..+....+ .....+
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~-~~d~----------~~~~~~---~l~~~~~~i~e~~l~~~~~~~~~~l~~t~ 65 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVT-IVDI----------LPSKVD---KINNGLSPIQDEYIEYYLKSKQLSIKATL 65 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEE-EECS----------CHHHHH---HHHTTCCSSCCHHHHHHHHHSCCCEEEES
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEE-EEEC----------CHHHHH---HHHcCCCCcCCCCHHHHHHhccCcEEEeC
Confidence 479999999999999999998 98854 4465 222321 121111111 00000000 011111
Q ss_pred CCCccccccceeecCCcccc----------cchhhHhhh--hccCceEEEecCCCCCCH-HHHHHHHhCCcEEecchh
Q 008128 491 EAKPWNERCDVAFPCASQNE----------IDQSDAINL--VNSGCRILVEGSNMPCTP-EAVDVLKKANVLIAPAMA 555 (577)
Q Consensus 491 ~~eil~~~cDIlIPcA~~n~----------It~enA~~l--~~~~akiVvEgAN~p~T~-eA~~iL~~rGI~viPD~~ 555 (577)
...-.-.+||++|-|..... ...+.++.| ++.++-+|.+..|.|-|. +..+.+.+..|.+.|..+
T Consensus 66 ~~~~~~~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~l~~~~iVV~~ST~~~g~~~~l~~~~~~~~v~~~Pe~~ 143 (402)
T 1dlj_A 66 DSKAAYKEAELVIIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKSTIPIGFITEMRQKFQTDRIIFSPEFL 143 (402)
T ss_dssp CHHHHHHHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHHHCSSCEEEECSCCCTTHHHHHHHHTTCSCEEECCCCC
T ss_pred CHHHHhcCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHhhCCCCEEEEeCCCCccHHHHHHHHhCCCeEEECCccc
Confidence 10001237899988876542 112222222 234566677799999654 444556566788888765
No 255
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=89.49 E-value=1.2 Score=43.95 Aligned_cols=90 Identities=14% Similarity=0.092 Sum_probs=54.7
Q ss_pred ceEEEEec-chHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCcc
Q 008128 417 LRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW 495 (577)
Q Consensus 417 krVaIQGf-GNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil 495 (577)
++|.|.|. |++|..+++.|.+.|..|+ +.|. +.+++..+. + .+ +. ..+..+.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~-~~~r----------~~~~~~~~~---~-~g-~~----------~~~~~~~~ 65 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLA-AIEI----------APEGRDRLQ---G-MG-IP----------LTDGDGWI 65 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEE-EECC----------SHHHHHHHH---H-TT-CC----------CCCSSGGG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEE-EEEC----------CHHHHHHHH---h-cC-CC----------cCCHHHHh
Confidence 58999999 9999999999999998854 5664 233332222 1 11 11 11222222
Q ss_pred ccccceeecCCcccccchhhHhhhhc--cCceEEEecCCCC
Q 008128 496 NERCDVAFPCASQNEIDQSDAINLVN--SGCRILVEGSNMP 534 (577)
Q Consensus 496 ~~~cDIlIPcA~~n~It~enA~~l~~--~~akiVvEgAN~p 534 (577)
.+||++|-|.....+ .+-...|.. ..-++|+..++..
T Consensus 66 -~~aDvVi~av~~~~~-~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 66 -DEADVVVLALPDNII-EKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp -GTCSEEEECSCHHHH-HHHHHHHGGGSCTTCEEEESCSHH
T ss_pred -cCCCEEEEcCCchHH-HHHHHHHHHhCCCCCEEEECCCCc
Confidence 379999998876653 444444422 1234677677764
No 256
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=89.39 E-value=1 Score=46.92 Aligned_cols=99 Identities=16% Similarity=0.105 Sum_probs=58.9
Q ss_pred ceEEEEe-cchHHHHHHHHHHHCC------CeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEe
Q 008128 417 LRCVVSG-SGKIAMHVLEKLIAYG------AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (577)
Q Consensus 417 krVaIQG-fGNVG~~aA~~L~e~G------AkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i 489 (577)
++|+|.| +|.||+.+++.|.+.+ ..++++++.+ ..|-.+..+ .+.+... ... .....
T Consensus 10 ~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~-----~agk~~~~~---------~~~l~~~-~~~-~~~~~ 73 (352)
T 2nqt_A 10 TKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAAT-----SAGSTLGEH---------HPHLTPL-AHR-VVEPT 73 (352)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESS-----CTTSBGGGT---------CTTCGGG-TTC-BCEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCC-----cCCCchhhh---------ccccccc-cee-eeccC
Confidence 6899999 9999999999999876 4777876531 122111110 1111100 000 01111
Q ss_pred CCCCccccccceeecCCcccccchhhHhhhhccCceEEEecCCCCC
Q 008128 490 DEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC 535 (577)
Q Consensus 490 ~~~eil~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~ 535 (577)
+ .+.|. +||+++-|+ ....+.+-++.+ +.++++|-=.+-.-.
T Consensus 74 ~-~~~~~-~~DvVf~al-g~~~s~~~~~~~-~~G~~vIDlSa~~R~ 115 (352)
T 2nqt_A 74 E-AAVLG-GHDAVFLAL-PHGHSAVLAQQL-SPETLIIDCGADFRL 115 (352)
T ss_dssp C-HHHHT-TCSEEEECC-TTSCCHHHHHHS-CTTSEEEECSSTTTC
T ss_pred C-HHHhc-CCCEEEECC-CCcchHHHHHHH-hCCCEEEEECCCccC
Confidence 1 11244 799999776 445688888888 889987776655443
No 257
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=89.34 E-value=2.7 Score=43.59 Aligned_cols=32 Identities=25% Similarity=0.291 Sum_probs=28.4
Q ss_pred CCCceEEEEecchHHHHHHHHHHHCCC-eEEEE
Q 008128 414 LKGLRCVVSGSGKIAMHVLEKLIAYGA-IPVSV 445 (577)
Q Consensus 414 l~GkrVaIQGfGNVG~~aA~~L~e~GA-kVVaI 445 (577)
-.|.+|+|.|.|.||..+++.+...|+ +|+++
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~ 244 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILS 244 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 468999999999999999999999999 76654
No 258
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=89.32 E-value=0.59 Score=49.36 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=31.4
Q ss_pred CCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
++.|++|+|.|+|.+|..+++.+..+|++ |.+.|.
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~-V~v~D~ 203 (401)
T 1x13_A 169 KVPPAKVMVIGAGVAGLAAIGAANSLGAI-VRAFDT 203 (401)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCE-EEEECS
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEcC
Confidence 47799999999999999999999999997 667776
No 259
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=89.18 E-value=1.2 Score=43.04 Aligned_cols=31 Identities=19% Similarity=0.276 Sum_probs=26.8
Q ss_pred ceEEEEecchHHHHHHHHHHHCCC----eEEEEEcC
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGA----IPVSVSDA 448 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GA----kVVaISDs 448 (577)
++|.|.|.|++|...++.|.+.|. . |.+.|.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~-V~~~~r 37 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQ-IICSDL 37 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGG-EEEECS
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCe-EEEEeC
Confidence 589999999999999999999997 6 456665
No 260
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=89.00 E-value=0.42 Score=49.81 Aligned_cols=35 Identities=23% Similarity=0.235 Sum_probs=30.8
Q ss_pred CCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
++.|++|.|.|+|.+|+.+|+.+...|++|+ +.|.
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~-~~d~ 199 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGATVT-VLDI 199 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEE-EEeC
Confidence 5789999999999999999999999999854 5554
No 261
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=88.94 E-value=0.65 Score=48.08 Aligned_cols=35 Identities=17% Similarity=0.296 Sum_probs=30.8
Q ss_pred CCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
++.+++|+|.|.|.+|..+++.+...|++|+ +.|.
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~-~~d~ 197 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGMGAQVT-ILDV 197 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEE-EEEC
Confidence 4789999999999999999999999999854 5554
No 262
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=88.81 E-value=1.6 Score=43.29 Aligned_cols=117 Identities=18% Similarity=0.164 Sum_probs=62.9
Q ss_pred CceEEEEecchHHHHHHHHHHHCCC---eEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC-
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAYGA---IPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE- 491 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~GA---kVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~- 491 (577)
.++|.|.|.|++|..+++.|.+.|. . |.++|. ++ +++ .+..+.. +....++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~-V~v~dr-----~~-----~~~---~~l~~~~-----------gi~~~~~~ 57 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNR-ICVTNR-----SL-----DKL---DFFKEKC-----------GVHTTQDN 57 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGG-EEEECS-----SS-----HHH---HHHHHTT-----------CCEEESCH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCe-EEEEeC-----CH-----HHH---HHHHHHc-----------CCEEeCCh
Confidence 4789999999999999999999996 5 556665 22 233 2222211 1222211
Q ss_pred CCccccccceeecCCcccccchhhHhhhhc--cCce-EEEecCCCCCCHHHHHHHHh--CCcEEecchhcccc
Q 008128 492 AKPWNERCDVAFPCASQNEIDQSDAINLVN--SGCR-ILVEGSNMPCTPEAVDVLKK--ANVLIAPAMAAGAG 559 (577)
Q Consensus 492 ~eil~~~cDIlIPcA~~n~It~enA~~l~~--~~ak-iVvEgAN~p~T~eA~~iL~~--rGI~viPD~~aNAG 559 (577)
.+. -.+||++|-|.....+ .+....|.. .+-+ +|+--+++-....-.+.|.. +=|.+.|..-+-.|
T Consensus 58 ~~~-~~~aDvVilav~p~~~-~~vl~~l~~~~l~~~~iiiS~~agi~~~~l~~~l~~~~~vvr~mPn~p~~v~ 128 (280)
T 3tri_A 58 RQG-ALNADVVVLAVKPHQI-KMVCEELKDILSETKILVISLAVGVTTPLIEKWLGKASRIVRAMPNTPSSVR 128 (280)
T ss_dssp HHH-HSSCSEEEECSCGGGH-HHHHHHHHHHHHTTTCEEEECCTTCCHHHHHHHHTCCSSEEEEECCGGGGGT
T ss_pred HHH-HhcCCeEEEEeCHHHH-HHHHHHHHhhccCCCeEEEEecCCCCHHHHHHHcCCCCeEEEEecCChHHhc
Confidence 111 2379999998865443 333333321 0223 66644443333333344432 22456676544443
No 263
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=88.76 E-value=0.4 Score=47.00 Aligned_cols=107 Identities=12% Similarity=0.042 Sum_probs=60.9
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCccc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWN 496 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil~ 496 (577)
++|.|.|.|++|...++.|.+.|..|+ +.| + ++-+ ++ +.+. + +.. +. +..+.+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~-~-----~~~~--~~------~~~~-g-~~~----~~-----~~~~~~- 56 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLH-VTT-I-----GPVA--DE------LLSL-G-AVN----VE-----TARQVT- 56 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEE-ECC-S-----SCCC--HH------HHTT-T-CBC----CS-----SHHHHH-
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEE-EEc-C-----HHHH--HH------HHHc-C-Ccc----cC-----CHHHHH-
Confidence 589999999999999999999998864 444 2 2211 11 1111 1 110 00 111122
Q ss_pred cccceeecCCcccccchhhHh---hh---hccCceEEEecCCCC-C-CHHHHHHHHhCCcEEe
Q 008128 497 ERCDVAFPCASQNEIDQSDAI---NL---VNSGCRILVEGSNMP-C-TPEAVDVLKKANVLIA 551 (577)
Q Consensus 497 ~~cDIlIPcA~~n~It~enA~---~l---~~~~akiVvEgAN~p-~-T~eA~~iL~~rGI~vi 551 (577)
.+||+++-|........+... .+ ++.+ ++|+.-+|.. . +.+..+.+.++|+.++
T Consensus 57 ~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~-~~vv~~s~~~~~~~~~l~~~~~~~g~~~~ 118 (295)
T 1yb4_A 57 EFADIIFIMVPDTPQVEDVLFGEHGCAKTSLQG-KTIVDMSSISPIETKRFAQRVNEMGADYL 118 (295)
T ss_dssp HTCSEEEECCSSHHHHHHHHHSTTSSTTSCCTT-EEEEECSCCCHHHHHHHHHHHHTTTEEEE
T ss_pred hcCCEEEEECCCHHHHHHHHhCchhHhhcCCCC-CEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 379999998865442232222 22 1223 4677777774 2 2334566777888776
No 264
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=88.66 E-value=0.4 Score=51.38 Aligned_cols=36 Identities=22% Similarity=0.326 Sum_probs=32.1
Q ss_pred CCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEc
Q 008128 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISD 447 (577)
.+++|++|+|.|.|.||...++.|.+.|++|+-|+.
T Consensus 8 ~~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~ 43 (457)
T 1pjq_A 8 CQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNAL 43 (457)
T ss_dssp ECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEES
T ss_pred EECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcC
Confidence 468999999999999999999999999999765553
No 265
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=88.59 E-value=1.7 Score=43.93 Aligned_cols=34 Identities=24% Similarity=0.333 Sum_probs=30.2
Q ss_pred CCCceEEEEec-chHHHHHHHHHHHCCCeEEEEEc
Q 008128 414 LKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 414 l~GkrVaIQGf-GNVG~~aA~~L~e~GAkVVaISD 447 (577)
-.|.+|+|.|. |.||..+++.+...|++|+++..
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~ 192 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVN 192 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC
Confidence 46899999997 99999999999999999877654
No 266
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=88.53 E-value=2.4 Score=41.21 Aligned_cols=90 Identities=12% Similarity=0.124 Sum_probs=52.6
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC-CCCcc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAKPW 495 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~-~~eil 495 (577)
++|.|.|+|++|..+++.|.+.|..|+ +.|. +.+++..+ .+ .+... ...+ ..+.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~~----------~~~~~~~~---~~-~g~~~---------~~~~~~~~~- 55 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLI-GVSR----------QQSTCEKA---VE-RQLVD---------EAGQDLSLL- 55 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECS----------CHHHHHHH---HH-TTSCS---------EEESCGGGG-
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEE-EEEC----------CHHHHHHH---Hh-CCCCc---------cccCCHHHh-
Confidence 479999999999999999999998854 4454 23333222 11 12110 1111 1223
Q ss_pred ccccceeecCCcccccchhhHhhhh---ccCceEEEecCCCC
Q 008128 496 NERCDVAFPCASQNEIDQSDAINLV---NSGCRILVEGSNMP 534 (577)
Q Consensus 496 ~~~cDIlIPcA~~n~It~enA~~l~---~~~akiVvEgAN~p 534 (577)
.+||+++-|.....+ .+.+..+. +.+ ++|+.-+|..
T Consensus 56 -~~~D~vi~av~~~~~-~~~~~~l~~~~~~~-~~vv~~~~~~ 94 (279)
T 2f1k_A 56 -QTAKIIFLCTPIQLI-LPTLEKLIPHLSPT-AIVTDVASVK 94 (279)
T ss_dssp -TTCSEEEECSCHHHH-HHHHHHHGGGSCTT-CEEEECCSCC
T ss_pred -CCCCEEEEECCHHHH-HHHHHHHHhhCCCC-CEEEECCCCc
Confidence 589999999876533 33333332 223 3666666643
No 267
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=88.47 E-value=1.9 Score=46.20 Aligned_cols=31 Identities=23% Similarity=0.225 Sum_probs=27.4
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
++|+|.|.|.||..+|..|.+.|..|+ +.|.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~-~~D~ 33 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVR-CIDT 33 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECS
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEE-EEEC
Confidence 589999999999999999999999865 5565
No 268
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=88.11 E-value=2 Score=43.37 Aligned_cols=106 Identities=19% Similarity=0.152 Sum_probs=59.0
Q ss_pred CCceEEEEecchHHHHHHHHHHHCC----CeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC
Q 008128 415 KGLRCVVSGSGKIAMHVLEKLIAYG----AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (577)
Q Consensus 415 ~GkrVaIQGfGNVG~~aA~~L~e~G----AkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~ 490 (577)
+.++|.|.|.|++|..+|..|.+.| .. |.+.|. +++. +++..+.+ . +....+
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~-V~v~~r-----~~~~---~~~~~l~~----~-----------G~~~~~ 76 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHK-IMASSP-----DMDL---ATVSALRK----M-----------GVKLTP 76 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGG-EEEECS-----CTTS---HHHHHHHH----H-----------TCEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcce-EEEECC-----CccH---HHHHHHHH----c-----------CCEEeC
Confidence 3468999999999999999999999 55 456665 2210 12222221 1 122111
Q ss_pred CCCccccccceeecCCcccccchhhHhhhhc--cCceEEEecCCCCCCHHHHHHHHh
Q 008128 491 EAKPWNERCDVAFPCASQNEIDQSDAINLVN--SGCRILVEGSNMPCTPEAVDVLKK 545 (577)
Q Consensus 491 ~~eil~~~cDIlIPcA~~n~It~enA~~l~~--~~akiVvEgAN~p~T~eA~~iL~~ 545 (577)
...-.-.+|||+|-|-....+ .+-+..|.. ..-++|+.-+|+-...+..+.|.+
T Consensus 77 ~~~e~~~~aDvVilav~~~~~-~~vl~~l~~~l~~~~ivvs~s~gi~~~~l~~~l~~ 132 (322)
T 2izz_A 77 HNKETVQHSDVLFLAVKPHII-PFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSA 132 (322)
T ss_dssp CHHHHHHHCSEEEECSCGGGH-HHHHHHHGGGCCTTCEEEECCTTCCHHHHHHHHHT
T ss_pred ChHHHhccCCEEEEEeCHHHH-HHHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHhh
Confidence 100012379999998875433 333333321 123578887776544444566665
No 269
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=87.74 E-value=0.28 Score=48.28 Aligned_cols=36 Identities=22% Similarity=0.301 Sum_probs=31.8
Q ss_pred CCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCC
Q 008128 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAK 449 (577)
Q Consensus 414 l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~ 449 (577)
|++++|+|.|.|.+|..+|+.|...|..-++|.|.+
T Consensus 29 l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 29 LKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp HHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 457899999999999999999999998667888874
No 270
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=87.49 E-value=0.53 Score=50.01 Aligned_cols=37 Identities=27% Similarity=0.375 Sum_probs=33.3
Q ss_pred CCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCC
Q 008128 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAK 449 (577)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~ 449 (577)
.+++|++|.|.|.|..|..+|+.|.+.|++ |+++|.+
T Consensus 5 ~~~~~k~v~viG~G~sG~s~A~~l~~~G~~-V~~~D~~ 41 (451)
T 3lk7_A 5 TTFENKKVLVLGLARSGEAAARLLAKLGAI-VTVNDGK 41 (451)
T ss_dssp CTTTTCEEEEECCTTTHHHHHHHHHHTTCE-EEEEESS
T ss_pred hhcCCCEEEEEeeCHHHHHHHHHHHhCCCE-EEEEeCC
Confidence 357899999999999999999999999999 6788873
No 271
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=87.06 E-value=0.38 Score=48.73 Aligned_cols=112 Identities=14% Similarity=0.124 Sum_probs=66.5
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCC-CCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC-CCc
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDE-DGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKP 494 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp-~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~-~ei 494 (577)
.||.|.|+|..|...++.| ..++++++|+|. ++ +-. +++ .+..++.+ + +.+.+++ +++
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~-----~~~~~~--~~~---~~~~~~~~-~--------~~~~~~~~~~l 62 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPG-----VPEEDL--SKL---EKAISEMN-I--------KPKKYNNWWEM 62 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECS-----STTCCC--HHH---HHHHHTTT-C--------CCEECSSHHHH
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecC-----CchhhH--HHH---HHHHHHcC-C--------CCcccCCHHHH
Confidence 5899999999998777777 778999999997 33 211 121 22211111 1 1122222 445
Q ss_pred cc-cccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHH---HhCCcE
Q 008128 495 WN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVL---KKANVL 549 (577)
Q Consensus 495 l~-~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL---~~rGI~ 549 (577)
+. .++|+++-|+ .+..+.+.+...++.+..+++|=-=.....|+++++ +++|+.
T Consensus 63 l~~~~vD~V~I~t-p~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~ 120 (337)
T 3ip3_A 63 LEKEKPDILVINT-VFSLNGKILLEALERKIHAFVEKPIATTFEDLEKIRSVYQKVRNE 120 (337)
T ss_dssp HHHHCCSEEEECS-SHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTTT
T ss_pred hcCCCCCEEEEeC-CcchHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCc
Confidence 53 4688888764 556677777777778888888852111223555443 455654
No 272
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=87.06 E-value=0.59 Score=45.32 Aligned_cols=34 Identities=15% Similarity=0.329 Sum_probs=30.4
Q ss_pred CCceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 415 ~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
++++|+|.|.|-+|+++++.|.+.|.+|++++-.
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4679999999999999999999999998887654
No 273
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=86.89 E-value=0.83 Score=43.05 Aligned_cols=35 Identities=34% Similarity=0.485 Sum_probs=30.6
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
.+++|++++|.| .|-+|+++++.|.+.|++|+.+.
T Consensus 3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~ 38 (244)
T 1cyd_A 3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVT 38 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEe
Confidence 468899999998 49999999999999999976553
No 274
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=86.84 E-value=0.82 Score=44.47 Aligned_cols=36 Identities=14% Similarity=0.111 Sum_probs=31.2
Q ss_pred CCCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 411 g~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
-.++++++|+|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~ 62 (272)
T 1yb1_A 26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWD 62 (272)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEE
Confidence 3578999999998 69999999999999999976543
No 275
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=86.80 E-value=0.76 Score=44.77 Aligned_cols=36 Identities=28% Similarity=0.247 Sum_probs=30.4
Q ss_pred CCCCCceEEEEec-c--hHHHHHHHHHHHCCCeEEEEEcC
Q 008128 412 KELKGLRCVVSGS-G--KIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 412 ~~l~GkrVaIQGf-G--NVG~~aA~~L~e~GAkVVaISDs 448 (577)
.+|+||+++|.|. | -+|..+|+.|.+.|++|+ ++|.
T Consensus 2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vv-i~~r 40 (256)
T 4fs3_A 2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLV-FTYR 40 (256)
T ss_dssp CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEE-EEES
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEE-EEEC
Confidence 3799999999995 3 499999999999999954 5665
No 276
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=86.76 E-value=1.5 Score=44.81 Aligned_cols=42 Identities=17% Similarity=0.179 Sum_probs=33.8
Q ss_pred HHHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEc
Q 008128 406 ILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 406 ~l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISD 447 (577)
+++..+....|.+|+|.|.|.||..+++.+...|++|+++..
T Consensus 178 al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~ 219 (366)
T 1yqd_A 178 PLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVIST 219 (366)
T ss_dssp HHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred HHHhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 344444444789999999999999999999999999776653
No 277
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=86.67 E-value=0.68 Score=48.66 Aligned_cols=114 Identities=18% Similarity=0.242 Sum_probs=66.8
Q ss_pred CCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCC
Q 008128 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEA 492 (577)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~ 492 (577)
++.|++|.|.|+|.+|..+++.|...|++-|.+.|. +.+++. ++.+..+ ++.++.+
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r----------~~~ra~---~la~~~g-----------~~~~~~~ 219 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANR----------TYERAV---ELARDLG-----------GEAVRFD 219 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECS----------SHHHHH---HHHHHHT-----------CEECCGG
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeC----------CHHHHH---HHHHHcC-----------CceecHH
Confidence 578999999999999999999999999833556665 122321 1111111 1111111
Q ss_pred Ccc--ccccceeecCCcc--cccchhhHhh-hhc---cCceEEEecCCCC--CCHHHHHHHHhCCcEE--ecch
Q 008128 493 KPW--NERCDVAFPCASQ--NEIDQSDAIN-LVN---SGCRILVEGSNMP--CTPEAVDVLKKANVLI--APAM 554 (577)
Q Consensus 493 eil--~~~cDIlIPcA~~--n~It~enA~~-l~~---~~akiVvEgAN~p--~T~eA~~iL~~rGI~v--iPD~ 554 (577)
++- -..+||+|-|+.. ..++.+.... +.+ .+-.+++..+. | ++|+ +..-.||.+ +||.
T Consensus 220 ~l~~~l~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~-P~~i~~~---l~~l~~v~l~d~d~l 289 (404)
T 1gpj_A 220 ELVDHLARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN-PRDVEEG---VENIEDVEVRTIDDL 289 (404)
T ss_dssp GHHHHHHTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS-SCSBCTT---GGGSTTEEEEEHHHH
T ss_pred hHHHHhcCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC-CCCCCcc---ccccCCeEEEeHhhH
Confidence 111 1379999998753 3445555544 321 24567787777 5 3543 233456666 6655
No 278
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=86.61 E-value=0.86 Score=43.37 Aligned_cols=109 Identities=12% Similarity=0.161 Sum_probs=62.0
Q ss_pred CceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCcc
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW 495 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil 495 (577)
.++|+|.|+|.+|+.+++.|.+.|. |+ +.|. |++ .+ ...+ .+ +.-+ +.++ +..+.|
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~-vid~-----~~~-----~~---~~~~--~~-~~~i---~gd~---~~~~~l 64 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FV-LAED-----ENV-----RK---KVLR--SG-ANFV---HGDP---TRVSDL 64 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EE-EESC-----GGG-----HH---HHHH--TT-CEEE---ESCT---TCHHHH
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EE-EEEC-----CHH-----HH---HHHh--cC-CeEE---EcCC---CCHHHH
Confidence 3589999999999999999999887 55 5565 222 22 1221 11 1100 0000 111222
Q ss_pred ----ccccceeecCCcccccch---hhHhhhhccCceEEEecCCCCCCHHHHHHHHhCCc--EEecc
Q 008128 496 ----NERCDVAFPCASQNEIDQ---SDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANV--LIAPA 553 (577)
Q Consensus 496 ----~~~cDIlIPcA~~n~It~---enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI--~viPD 553 (577)
-..||.+|-|...++.|. ..|+++ ..++++|+...| ++..+.|++.|+ .+.|.
T Consensus 65 ~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~-~~~~~iia~~~~----~~~~~~l~~~G~~~vi~p~ 126 (234)
T 2aef_A 65 EKANVRGARAVIVDLESDSETIHCILGIRKI-DESVRIIAEAER----YENIEQLRMAGADQVISPF 126 (234)
T ss_dssp HHTTCTTCSEEEECCSCHHHHHHHHHHHHHH-CSSSEEEEECSS----GGGHHHHHHHTCSEEECHH
T ss_pred HhcCcchhcEEEEcCCCcHHHHHHHHHHHHH-CCCCeEEEEECC----HhHHHHHHHCCCCEEECHH
Confidence 137899888776544443 444444 234688887643 344567777776 35554
No 279
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=86.57 E-value=1.7 Score=41.76 Aligned_cols=32 Identities=6% Similarity=0.071 Sum_probs=27.1
Q ss_pred CceEEEEecchHHHHHHHHHHHCC----CeEEEEEcC
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAYG----AIPVSVSDA 448 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~G----AkVVaISDs 448 (577)
.++|.|.|.|++|+.++..|.+.| .. |.+.|.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~-v~~~~~ 39 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKEN-LFYYGP 39 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGG-EEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCe-EEEEeC
Confidence 468999999999999999999988 45 556665
No 280
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=86.50 E-value=0.77 Score=43.37 Aligned_cols=36 Identities=31% Similarity=0.309 Sum_probs=31.5
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
+++|++++|.| .|.+|+++++.|.+.|++|+.+.+.
T Consensus 2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r 38 (247)
T 2hq1_A 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSP 38 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCc
Confidence 47899999998 6999999999999999998877554
No 281
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=86.42 E-value=0.78 Score=43.55 Aligned_cols=37 Identities=14% Similarity=0.205 Sum_probs=27.6
Q ss_pred CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
+..+..++|.|.|.|++|..+|..|.+.|..|+ +.|.
T Consensus 14 ~~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~-~~~~ 50 (209)
T 2raf_A 14 NLYFQGMEITIFGKGNMGQAIGHNFEIAGHEVT-YYGS 50 (209)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTCEEE-EECT
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHHCCCEEE-EEcC
Confidence 456888999999999999999999999999855 4565
No 282
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=86.24 E-value=0.97 Score=43.55 Aligned_cols=34 Identities=29% Similarity=0.371 Sum_probs=30.1
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.+++||+++|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 37 (263)
T 3ai3_A 3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLV 37 (263)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence 468899999998 5999999999999999997654
No 283
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=86.20 E-value=3.1 Score=43.85 Aligned_cols=31 Identities=23% Similarity=0.201 Sum_probs=26.7
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
++|+|.|.|.||..+|..|.+.|..|+ +.|.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~-~~d~ 31 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVI-GVDV 31 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEE-EEEC
Confidence 479999999999999999999999854 4565
No 284
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=86.02 E-value=1.1 Score=46.23 Aligned_cols=101 Identities=18% Similarity=0.237 Sum_probs=60.0
Q ss_pred ceEEEEe-cchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCccc--ccccccCCceEeC-C
Q 008128 417 LRCVVSG-SGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLR--DYSKTYARSKYYD-E 491 (577)
Q Consensus 417 krVaIQG-fGNVG~~aA~~L~e~-GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~--~y~~~~p~a~~i~-~ 491 (577)
.+|+|.| +|.+|+.+++.|.+. ...++++.+++ ...|-.+.+. .+.+. ..........+.+ .
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~----~~~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~d 71 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASP----SKIGKKYKDA---------VKWIEQGDIPEEVQDLPIVSTN 71 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCG----GGTTSBHHHH---------CCCCSSSSCCHHHHTCBEECSS
T ss_pred cEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecCh----hhcCCCHHHh---------cCcccccccccCCceeEEeeCC
Confidence 6899999 999999999998765 46888997431 1222211110 11100 0000000011111 1
Q ss_pred CCccccccceeecCCcccccchhhHhhhhccCceEEEecCC
Q 008128 492 AKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (577)
Q Consensus 492 ~eil~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (577)
.+.| .+||+++-| +....+.+.+..+++.++++|--.+.
T Consensus 72 ~~~~-~~vDvVf~a-tp~~~s~~~a~~~~~aG~~VId~s~~ 110 (350)
T 2ep5_A 72 YEDH-KDVDVVLSA-LPNELAESIELELVKNGKIVVSNASP 110 (350)
T ss_dssp GGGG-TTCSEEEEC-CCHHHHHHHHHHHHHTTCEEEECSST
T ss_pred HHHh-cCCCEEEEC-CChHHHHHHHHHHHHCCCEEEECCcc
Confidence 1234 489999965 46667888999998999998876654
No 285
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=85.90 E-value=0.77 Score=44.64 Aligned_cols=53 Identities=13% Similarity=0.145 Sum_probs=32.8
Q ss_pred chHHHHHHHHHHHH-HcCCCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEc
Q 008128 395 TGYGLVFFAQLILA-DMNKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 395 TG~GV~~~~~~~l~-~~g~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISD 447 (577)
|--|+-.+.+.+.- ....+++||+|+|.| .|.+|.++|+.|.+.|++|+.+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r 61 (271)
T 4iin_A 7 HSSGVDLGTENLYFQSNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYR 61 (271)
T ss_dssp -----------------CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred cccccccCcceehhhhhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 33344444444443 345789999999998 589999999999999999876654
No 286
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=85.77 E-value=1.1 Score=44.42 Aligned_cols=37 Identities=24% Similarity=0.328 Sum_probs=31.6
Q ss_pred CCCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEc
Q 008128 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 411 g~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISD 447 (577)
..+|+||+++|.| .+-+|..+|+.|.+.|++|+.+..
T Consensus 2 ~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r 39 (258)
T 4gkb_A 2 DLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFAR 39 (258)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEEC
Confidence 4689999999998 578999999999999999765443
No 287
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=85.67 E-value=1.1 Score=42.27 Aligned_cols=35 Identities=37% Similarity=0.388 Sum_probs=30.5
Q ss_pred CCCCCceEEEEec-chHHHHHHHHHHHCCCeEEEEE
Q 008128 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aA~~L~e~GAkVVaIS 446 (577)
.+++|++|+|.|. |-+|+++++.|.+.|++|+.+.
T Consensus 3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~ 38 (244)
T 3d3w_A 3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVS 38 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 4688999999995 9999999999999999976553
No 288
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=85.66 E-value=4.4 Score=43.90 Aligned_cols=32 Identities=9% Similarity=-0.111 Sum_probs=27.7
Q ss_pred CceEEEEecchHHHHHHHHHHHC-CC-eEEEEEcC
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAY-GA-IPVSVSDA 448 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~-GA-kVVaISDs 448 (577)
-++|+|.|.|.||..+|..|.+. |. .|+ +.|.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~-~~D~ 51 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVL-GFQR 51 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEE-EECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEE-EEEC
Confidence 36899999999999999999999 99 854 5565
No 289
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=85.61 E-value=1.1 Score=42.83 Aligned_cols=34 Identities=24% Similarity=0.308 Sum_probs=30.2
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.++++++|+|.| .|-+|+++++.|.+.|++|+.+
T Consensus 3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~ 37 (264)
T 2pd6_A 3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAAC 37 (264)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 468899999998 6999999999999999997655
No 290
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=85.58 E-value=4.1 Score=41.02 Aligned_cols=99 Identities=11% Similarity=0.087 Sum_probs=56.2
Q ss_pred CceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccC-CceEeCCCCc
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYA-RSKYYDEAKP 494 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p-~a~~i~~~ei 494 (577)
..+|.|.|.|++|..+|..|.+.|..| .+.|. +.++++.| ++....+ |..... +....++.+-
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V-~~~~r----------~~~~~~~l---~~~g~~~--~~~~~~~~~~~~~~~~~ 77 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEV-ILWAR----------RKEIVDLI---NVSHTSP--YVEESKITVRATNDLEE 77 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEE-EEECS----------SHHHHHHH---HHHSCBT--TBTTCCCCSEEESCGGG
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeE-EEEeC----------CHHHHHHH---HHhCCcc--cCCCCeeeEEEeCCHHH
Confidence 468999999999999999999999884 55554 22333222 2221111 110000 1222222111
Q ss_pred cccccceeecCCcccccchhhHhhhhccCceEEEecCCC
Q 008128 495 WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNM 533 (577)
Q Consensus 495 l~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~ 533 (577)
-.+||++|-|-.. ....+.+..|.. .-++|+--+|+
T Consensus 78 -~~~aDvVil~vk~-~~~~~v~~~l~~-~~~~vv~~~nG 113 (335)
T 1z82_A 78 -IKKEDILVIAIPV-QYIREHLLRLPV-KPSMVLNLSKG 113 (335)
T ss_dssp -CCTTEEEEECSCG-GGHHHHHTTCSS-CCSEEEECCCC
T ss_pred -hcCCCEEEEECCH-HHHHHHHHHhCc-CCCEEEEEeCC
Confidence 2478999988764 333444444532 23578888885
No 291
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=85.53 E-value=1.1 Score=43.41 Aligned_cols=37 Identities=19% Similarity=0.190 Sum_probs=32.4
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+.+.
T Consensus 4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~ 41 (259)
T 3edm_A 4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNG 41 (259)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 468999999998 5889999999999999998877565
No 292
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=85.51 E-value=0.4 Score=50.30 Aligned_cols=90 Identities=11% Similarity=0.113 Sum_probs=51.9
Q ss_pred ceEEEEe-cchHHHHHHH-HHHHCCC---eEEEE-EcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC
Q 008128 417 LRCVVSG-SGKIAMHVLE-KLIAYGA---IPVSV-SDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (577)
Q Consensus 417 krVaIQG-fGNVG~~aA~-~L~e~GA---kVVaI-SDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~ 490 (577)
++|+|.| +|.||+.+++ .|.+... .+..+ +++.|. .+..+ ++. +. .....+
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~-------~v~~~---------~g~--~i-----~~~~~~ 58 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQ-------AAPSF---------GGT--TG-----TLQDAF 58 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS-------BCCGG---------GTC--CC-----BCEETT
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCC-------Ccccc---------CCC--ce-----EEEecC
Confidence 4899999 9999999999 5655542 33333 333332 11110 010 00 011111
Q ss_pred CCCccccccceeecCCcccccchhhHhhhhccCce-EEEecC
Q 008128 491 EAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVEGS 531 (577)
Q Consensus 491 ~~eil~~~cDIlIPcA~~n~It~enA~~l~~~~ak-iVvEgA 531 (577)
..+.| ..|||++-|+ ....+.+.++.+.+.+|| +|+..+
T Consensus 59 ~~~~~-~~~DvVf~a~-g~~~s~~~a~~~~~~G~k~vVID~s 98 (367)
T 1t4b_A 59 DLEAL-KALDIIVTCQ-GGDYTNEIYPKLRESGWQGYWIDAA 98 (367)
T ss_dssp CHHHH-HTCSEEEECS-CHHHHHHHHHHHHHTTCCCEEEECS
T ss_pred ChHHh-cCCCEEEECC-CchhHHHHHHHHHHCCCCEEEEcCC
Confidence 11124 3799999876 566778888888888883 666654
No 293
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=85.48 E-value=0.57 Score=46.18 Aligned_cols=36 Identities=17% Similarity=0.210 Sum_probs=32.5
Q ss_pred CCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCC
Q 008128 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAK 449 (577)
Q Consensus 414 l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~ 449 (577)
|++++|+|.|.|-+|..+++.|...|..-++|.|.+
T Consensus 26 l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 26 LLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp HHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred HhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 467899999999999999999999998778898864
No 294
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=85.44 E-value=1.7 Score=44.18 Aligned_cols=41 Identities=22% Similarity=0.242 Sum_probs=32.8
Q ss_pred HHHcCCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEc
Q 008128 407 LADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 407 l~~~g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISD 447 (577)
++..+....|.+|+|.|.|.||..+++.+...|++|+++..
T Consensus 172 l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~ 212 (357)
T 2cf5_A 172 LSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISS 212 (357)
T ss_dssp HHHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEES
T ss_pred HHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 34344333789999999999999999999999999776654
No 295
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=85.37 E-value=0.59 Score=47.65 Aligned_cols=52 Identities=21% Similarity=0.291 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHcC-----CCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCC
Q 008128 398 GLVFFAQLILADMN-----KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAK 449 (577)
Q Consensus 398 GV~~~~~~~l~~~g-----~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~ 449 (577)
|+-|.=+-+|+..| ..|+.++|+|.|.|-+|..+++.|...|..-++|.|.+
T Consensus 13 ~~~y~r~i~L~~~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D 69 (292)
T 3h8v_A 13 GLVPRGSMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYD 69 (292)
T ss_dssp -------------------CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CCCchHhhcccccChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 34444444454443 35788999999999999999999999997667787753
No 296
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=85.35 E-value=1.4 Score=43.71 Aligned_cols=36 Identities=22% Similarity=0.315 Sum_probs=30.9
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
.||+||+++|.| .+-.|..+|+.|.+.|++|+ +.|.
T Consensus 3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv-~~~~ 39 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVV-AVEL 39 (254)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEE-EEEC
Confidence 379999999998 57799999999999999965 5665
No 297
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=85.30 E-value=3.2 Score=42.30 Aligned_cols=114 Identities=16% Similarity=0.159 Sum_probs=66.9
Q ss_pred CCceEEEEecchHHHHHHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCC
Q 008128 415 KGLRCVVSGSGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAK 493 (577)
Q Consensus 415 ~GkrVaIQGfGNVG~~aA~~L~e-~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~e 493 (577)
..+++.|.|.|..|...++.|.+ .+.+-|.|.|.+ ..+++ ..++.+..+ + .....+.++
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~---------~a~~l--a~~l~~~~g-~--------~~~~~~~~e 179 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY---------ASPEI--LERIGRRCG-V--------PARMAAPAD 179 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT---------CCHHH--HHHHHHHHT-S--------CEEECCHHH
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc---------HHHHH--HHHHHHhcC-C--------eEEEeCHHH
Confidence 56899999999999999999887 456667777774 22232 112221111 1 111111111
Q ss_pred ccccccceeecCCcc--cccchhhHhhhhccCceEEEecCCCCCCHHHHHHHHhCCcEEecc
Q 008128 494 PWNERCDVAFPCASQ--NEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPA 553 (577)
Q Consensus 494 il~~~cDIlIPcA~~--n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI~viPD 553 (577)
. -.+|||++-|+.. ..++.+ .++.++-++.=|+..|-..|.+..+..+.-.++-|
T Consensus 180 a-v~~aDIVi~aT~s~~pvl~~~----~l~~G~~V~~vGs~~p~~~El~~~~~~~a~~v~vD 236 (313)
T 3hdj_A 180 I-AAQADIVVTATRSTTPLFAGQ----ALRAGAFVGAIGSSLPHTRELDDEALRRARAVVVE 236 (313)
T ss_dssp H-HHHCSEEEECCCCSSCSSCGG----GCCTTCEEEECCCSSTTCCCCCHHHHHHCSEEEES
T ss_pred H-HhhCCEEEEccCCCCcccCHH----HcCCCcEEEECCCCCCchhhcCHHHHhcCCEEEEC
Confidence 1 1379999988764 334322 24568999999999886556544444444333344
No 298
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=85.14 E-value=1.1 Score=43.05 Aligned_cols=35 Identities=34% Similarity=0.332 Sum_probs=30.2
Q ss_pred CCCCCCceEEEEec-ch--HHHHHHHHHHHCCCeEEEE
Q 008128 411 NKELKGLRCVVSGS-GK--IAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 411 g~~l~GkrVaIQGf-GN--VG~~aA~~L~e~GAkVVaI 445 (577)
..+++||+++|.|. |. +|..+|+.|.+.|++|+.+
T Consensus 2 ~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~ 39 (266)
T 3oig_A 2 NFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFT 39 (266)
T ss_dssp CSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEE
T ss_pred ccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEe
Confidence 35789999999995 66 9999999999999997655
No 299
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=85.04 E-value=0.88 Score=42.89 Aligned_cols=36 Identities=25% Similarity=0.377 Sum_probs=30.8
Q ss_pred CCCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 411 g~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
..+++|++++|.| .|.+|+++++.|.+.|++|+.+.
T Consensus 2 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~ 38 (248)
T 2pnf_A 2 EIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITG 38 (248)
T ss_dssp CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEe
Confidence 3468899999998 69999999999999999976553
No 300
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=85.03 E-value=1.2 Score=46.01 Aligned_cols=92 Identities=17% Similarity=0.255 Sum_probs=58.0
Q ss_pred CceEEEEe-cchHHHHHHHHHHHC---CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC
Q 008128 416 GLRCVVSG-SGKIAMHVLEKLIAY---GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (577)
Q Consensus 416 GkrVaIQG-fGNVG~~aA~~L~e~---GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~ 491 (577)
..+|+|.| +|.||+.+.+.|.+. ...++++++.+ ..|-.+. + .+. +. .....+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~-----~~G~~~~-~---------~~~--~i-----~~~~~~~ 60 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASER-----SEGKTYR-F---------NGK--TV-----RVQNVEE 60 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTT-----TTTCEEE-E---------TTE--EE-----EEEEGGG
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCC-----CCCCcee-e---------cCc--ee-----EEecCCh
Confidence 36899999 999999999999886 36788888742 1121100 0 000 00 0011121
Q ss_pred CCccccccceeecCCcccccchhhHhhhhccCceEEEecCC
Q 008128 492 AKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (577)
Q Consensus 492 ~eil~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (577)
+.| .+||+++-|+ ....+.+.++.+++.+|++|-=.+-
T Consensus 61 -~~~-~~vDvVf~a~-g~~~s~~~a~~~~~~G~~vId~s~~ 98 (336)
T 2r00_A 61 -FDW-SQVHIALFSA-GGELSAKWAPIAAEAGVVVIDNTSH 98 (336)
T ss_dssp -CCG-GGCSEEEECS-CHHHHHHHHHHHHHTTCEEEECSST
T ss_pred -HHh-cCCCEEEECC-CchHHHHHHHHHHHcCCEEEEcCCc
Confidence 245 4789998775 4556788888888888887775554
No 301
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=84.99 E-value=2.9 Score=42.32 Aligned_cols=116 Identities=16% Similarity=0.247 Sum_probs=66.6
Q ss_pred ceEEEEec-chHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCcc
Q 008128 417 LRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW 495 (577)
Q Consensus 417 krVaIQGf-GNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil 495 (577)
.+++|+|. |+.|+..++.|.+.|.++|+..+.... |- ++ . .+.- |+.. +++.
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~VnP~~~-----g~---~i---------~-G~~v----y~sl-----~el~ 66 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAMLEYGTKVVAGVTPGKG-----GS---EV---------H-GVPV----YDSV-----KEAL 66 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCT-----TC---EE---------T-TEEE----ESSH-----HHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCcEEEEeCCCCC-----Cc---eE---------C-CEee----eCCH-----HHHh
Confidence 46888897 999999999999999987665554210 10 00 0 0111 1111 1222
Q ss_pred c-cc-cceeecCCcccccchhhHhhhhccCceEEEec-CCCCCC--HHHHHHHHhCCcEEe-cchhccccceeeh
Q 008128 496 N-ER-CDVAFPCASQNEIDQSDAINLVNSGCRILVEG-SNMPCT--PEAVDVLKKANVLIA-PAMAAGAGGVRYS 564 (577)
Q Consensus 496 ~-~~-cDIlIPcA~~n~It~enA~~l~~~~akiVvEg-AN~p~T--~eA~~iL~~rGI~vi-PD~~aNAGGVivS 564 (577)
+ .+ +|+++-|... ....+.+...++.+++.|+-. ...+.+ .+..++.++.|+.++ | |+-|++..
T Consensus 67 ~~~~~~DvaIi~vp~-~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~viGP----Nc~Gii~~ 136 (297)
T 2yv2_A 67 AEHPEINTSIVFVPA-PFAPDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYARQKGATIIGP----NCPGAITP 136 (297)
T ss_dssp HHCTTCCEEEECCCG-GGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEECS----SSCEEEET
T ss_pred hcCCCCCEEEEecCH-HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEcC----CCCeeEcc
Confidence 2 13 7888866543 445677777777799944443 333322 134566678899655 5 34455543
No 302
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=84.91 E-value=0.9 Score=40.43 Aligned_cols=30 Identities=23% Similarity=0.318 Sum_probs=27.3
Q ss_pred eEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 418 RCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 418 rVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
.|+|+|.|-.|..+|..|.+.|.+ |.|-|.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~-V~v~Ek 33 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQ-VHLFDK 33 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC-EEEECS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC-EEEEEC
Confidence 599999999999999999999999 667775
No 303
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=84.88 E-value=1.1 Score=42.64 Aligned_cols=35 Identities=20% Similarity=0.292 Sum_probs=30.4
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
.++++++|+|.| .|.+|+++++.|.+.|++|+.+.
T Consensus 9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~ 44 (260)
T 3awd_A 9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIAD 44 (260)
T ss_dssp GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEe
Confidence 357899999998 69999999999999999976653
No 304
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=84.85 E-value=1.1 Score=42.45 Aligned_cols=35 Identities=23% Similarity=0.349 Sum_probs=30.5
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
.+++|++++|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~ 42 (254)
T 2wsb_A 7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILID 42 (254)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 468899999998 69999999999999999976553
No 305
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=84.75 E-value=6.1 Score=35.00 Aligned_cols=107 Identities=11% Similarity=0.020 Sum_probs=62.1
Q ss_pred ceEEEEec----chHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCC
Q 008128 417 LRCVVSGS----GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEA 492 (577)
Q Consensus 417 krVaIQGf----GNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~ 492 (577)
++|+|.|. +.+|..+++.|.+.|.+|..| ||.+= ++ ..+.- |+....+
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pV--------nP~~~---~i----------~G~~~----y~sl~dl--- 56 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHGHEFIPV--------GRKKG---EV----------LGKTI----INERPVI--- 56 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEE--------SSSCS---EE----------TTEEC----BCSCCCC---
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEE--------CCCCC---cC----------CCeec----cCChHHC---
Confidence 68999996 779999999999999987765 44321 10 01111 2322211
Q ss_pred Cccccc-cceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHHHhCCcEEecchhcccccee
Q 008128 493 KPWNER-CDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVR 562 (577)
Q Consensus 493 eil~~~-cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI~viPD~~aNAGGVi 562 (577)
-+.| ++|++|+...-.+=++ +.++ ++|.|+= .-+...+|+.++.++.||.++| |+=||.
T Consensus 57 --p~vDlavi~~p~~~v~~~v~e-~~~~---g~k~v~~-~~G~~~~e~~~~a~~~Girvv~----nC~gv~ 116 (122)
T 3ff4_A 57 --EGVDTVTLYINPQNQLSEYNY-ILSL---KPKRVIF-NPGTENEELEEILSENGIEPVI----GCTLVM 116 (122)
T ss_dssp --TTCCEEEECSCHHHHGGGHHH-HHHH---CCSEEEE-CTTCCCHHHHHHHHHTTCEEEE----SCHHHH
T ss_pred --CCCCEEEEEeCHHHHHHHHHH-HHhc---CCCEEEE-CCCCChHHHHHHHHHcCCeEEC----CcCeEE
Confidence 1211 3455555433222222 2223 6666552 2344678999999999999985 554443
No 306
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=84.72 E-value=1.2 Score=46.07 Aligned_cols=91 Identities=19% Similarity=0.243 Sum_probs=54.4
Q ss_pred ceEEEEe-cchHHHHHHHHHHHCC---CeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCC
Q 008128 417 LRCVVSG-SGKIAMHVLEKLIAYG---AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEA 492 (577)
Q Consensus 417 krVaIQG-fGNVG~~aA~~L~e~G---AkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~ 492 (577)
++|+|.| +|.||+.+++.|.+.+ ..++++.+.. ..|-.+. + .+. +. .....+.+
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~-----~~g~~~~-~---------~g~--~i-----~~~~~~~~ 64 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE-----SAGQRMG-F---------AES--SL-----RVGDVDSF 64 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT-----TTTCEEE-E---------TTE--EE-----ECEEGGGC
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCC-----CCCCccc-c---------CCc--ce-----EEecCCHH
Confidence 5899999 9999999999998654 4567776642 1111000 0 000 00 00011112
Q ss_pred CccccccceeecCCcccccchhhHhhhhccCceEEEecCC
Q 008128 493 KPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (577)
Q Consensus 493 eil~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (577)
. | ..||+++-|+. ...+.+.++.+.+.++++|.=.+.
T Consensus 65 ~-~-~~~DvV~~a~g-~~~s~~~a~~~~~aG~kvId~Sa~ 101 (340)
T 2hjs_A 65 D-F-SSVGLAFFAAA-AEVSRAHAERARAAGCSVIDLSGA 101 (340)
T ss_dssp C-G-GGCSEEEECSC-HHHHHHHHHHHHHTTCEEEETTCT
T ss_pred H-h-cCCCEEEEcCC-cHHHHHHHHHHHHCCCEEEEeCCC
Confidence 2 4 37899998764 445777788777788887754443
No 307
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=84.64 E-value=2.3 Score=44.46 Aligned_cols=108 Identities=12% Similarity=0.149 Sum_probs=64.6
Q ss_pred CceEEEEecchHHHHHHHHHHHC--CCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCC
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAY--GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAK 493 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~--GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~e 493 (577)
-.||+|.|.| .|+.-++.+.+. +..+++|+|. ++ ++. .++.++.| +.-| -+-++
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~-----~~-----~~a---~~~a~~~g-v~~~---------~~~~~ 62 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQ-----GS-----ARS---RELAHAFG-IPLY---------TSPEQ 62 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECC-----SS-----HHH---HHHHHHTT-CCEE---------SSGGG
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECC-----CH-----HHH---HHHHHHhC-CCEE---------CCHHH
Confidence 4699999999 688767766654 6899999997 22 232 22222222 2211 12234
Q ss_pred ccccccceeecCCcccccc----hhhHhhhhccCceEEEecCCCCCC-HHHHHHH---HhCCcEEec
Q 008128 494 PWNERCDVAFPCASQNEID----QSDAINLVNSGCRILVEGSNMPCT-PEAVDVL---KKANVLIAP 552 (577)
Q Consensus 494 il~~~cDIlIPcA~~n~It----~enA~~l~~~~akiVvEgAN~p~T-~eA~~iL---~~rGI~viP 552 (577)
+++ ++|+.+=|. .+..+ .+-|...++.|..++||= |+| .||++++ +++|+.+.-
T Consensus 63 l~~-~~D~v~i~~-p~~~h~~~~~~~a~~al~aGkhVl~EK---Pl~~~ea~~l~~~A~~~g~~~~v 124 (372)
T 4gmf_A 63 ITG-MPDIACIVV-RSTVAGGAGTQLARHFLARGVHVIQEH---PLHPDDISSLQTLAQEQGCCYWI 124 (372)
T ss_dssp CCS-CCSEEEECC-C--CTTSHHHHHHHHHHHTTCEEEEES---CCCHHHHHHHHHHHHHHTCCEEE
T ss_pred Hhc-CCCEEEEEC-CCcccchhHHHHHHHHHHcCCcEEEec---CCCHHHHHHHHHHHHHcCCEEEE
Confidence 443 567665543 33333 566777778899999995 555 4555444 677876653
No 308
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=84.64 E-value=1.1 Score=43.24 Aligned_cols=36 Identities=17% Similarity=0.168 Sum_probs=29.6
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+. .|.
T Consensus 3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~-~~r 39 (252)
T 3h7a_A 3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFA-GRR 39 (252)
T ss_dssp --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEE-EeC
Confidence 468899999998 588999999999999999665 454
No 309
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=84.49 E-value=1.2 Score=42.42 Aligned_cols=34 Identities=26% Similarity=0.290 Sum_probs=30.1
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.+++||+++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~ 39 (253)
T 3qiv_A 5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVA 39 (253)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 568899999998 5899999999999999996654
No 310
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=84.42 E-value=1.3 Score=42.69 Aligned_cols=34 Identities=21% Similarity=0.199 Sum_probs=29.9
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.+++||+++|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 37 (260)
T 2z1n_A 3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLF 37 (260)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence 468899999998 6899999999999999997654
No 311
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=84.32 E-value=1 Score=42.86 Aligned_cols=35 Identities=29% Similarity=0.348 Sum_probs=30.4
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEc
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISD 447 (577)
+++||+++|.| .|.+|+++|+.|.+.|++|+.+.-
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r 37 (247)
T 3lyl_A 2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTAT 37 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 57899999998 589999999999999999776543
No 312
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=84.28 E-value=1.2 Score=42.78 Aligned_cols=35 Identities=20% Similarity=0.111 Sum_probs=29.9
Q ss_pred CCCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 411 g~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
..+++||+++|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 14 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~ 49 (249)
T 1o5i_A 14 ELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTIC 49 (249)
T ss_dssp --CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred HhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 4579999999998 5899999999999999997654
No 313
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=84.26 E-value=0.87 Score=43.87 Aligned_cols=34 Identities=26% Similarity=0.257 Sum_probs=29.8
Q ss_pred CCCCCceEEEEec-c-hHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSGS-G-KIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQGf-G-NVG~~aA~~L~e~GAkVVaI 445 (577)
.+++||+++|.|. | .+|.++|+.|.+.|++|+.+
T Consensus 18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~ 53 (266)
T 3o38_A 18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVIS 53 (266)
T ss_dssp STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEe
Confidence 3588999999997 8 59999999999999997654
No 314
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=84.23 E-value=1.3 Score=42.56 Aligned_cols=34 Identities=24% Similarity=0.298 Sum_probs=30.0
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.+++||+++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 37 (249)
T 2ew8_A 3 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIA 37 (249)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 458899999998 6899999999999999997654
No 315
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=84.13 E-value=1 Score=44.70 Aligned_cols=35 Identities=14% Similarity=0.325 Sum_probs=30.3
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
.+|+||+++|.| .+-+|..+|+.|.+.|++|+.+.
T Consensus 7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~ 42 (261)
T 4h15_A 7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTA 42 (261)
T ss_dssp CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEE
Confidence 379999999998 57799999999999999976543
No 316
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=84.07 E-value=1.2 Score=43.50 Aligned_cols=37 Identities=22% Similarity=0.239 Sum_probs=30.6
Q ss_pred CCCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 411 g~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
..+++||+++|.| .|-+|.++|+.|.+.|++|+. .|.
T Consensus 6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~-~~r 43 (281)
T 3svt_A 6 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMI-VGR 43 (281)
T ss_dssp --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred ccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EeC
Confidence 4578999999998 689999999999999999664 444
No 317
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=84.03 E-value=1.4 Score=43.39 Aligned_cols=36 Identities=25% Similarity=0.351 Sum_probs=31.7
Q ss_pred CCCCceEEEEec-----------------chHHHHHHHHHHHCCCeEEEEEcC
Q 008128 413 ELKGLRCVVSGS-----------------GKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 413 ~l~GkrVaIQGf-----------------GNVG~~aA~~L~e~GAkVVaISDs 448 (577)
+++|++|+|.|- |..|..+|+.|.+.|++|+.++..
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECC
Confidence 589999999987 799999999999999998776543
No 318
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=84.03 E-value=3.6 Score=43.78 Aligned_cols=34 Identities=15% Similarity=0.216 Sum_probs=28.5
Q ss_pred CCceEEEEec-chHHHHHHHHHHHCCCe--EEEEEcC
Q 008128 415 KGLRCVVSGS-GKIAMHVLEKLIAYGAI--PVSVSDA 448 (577)
Q Consensus 415 ~GkrVaIQGf-GNVG~~aA~~L~e~GAk--VVaISDs 448 (577)
...+|+|.|. |+||..+++.+..+|+. .|.+.|.
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~ 249 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDI 249 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeec
Confidence 4568999999 99999999999999983 4667664
No 319
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=83.99 E-value=1.3 Score=42.19 Aligned_cols=35 Identities=29% Similarity=0.566 Sum_probs=30.7
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
.++++++++|.| .|.+|+++++.|.+.|++|+.+.
T Consensus 8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~ 43 (265)
T 2o23_A 8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLD 43 (265)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 468899999998 69999999999999999977653
No 320
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=83.98 E-value=3.5 Score=44.20 Aligned_cols=115 Identities=13% Similarity=0.206 Sum_probs=68.6
Q ss_pred HHHHHHHcCC-CCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCccccccc
Q 008128 403 AQLILADMNK-ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK 481 (577)
Q Consensus 403 ~~~~l~~~g~-~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~ 481 (577)
++.+++.++. +-.-++|.|.|.|++|.++|+.|. .+.. |.|.+. |.++...+.+
T Consensus 221 i~~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~-~~~~-v~iIE~----------d~~r~~~la~------------- 275 (461)
T 4g65_A 221 IRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLE-QTYS-VKLIER----------NLQRAEKLSE------------- 275 (461)
T ss_dssp HHHHHHHTTGGGSCCCEEEEECCSHHHHHHHHHHT-TTSE-EEEEES----------CHHHHHHHHH-------------
T ss_pred HHHHHHhhccccccccEEEEEcchHHHHHHHHHhh-hcCc-eEEEec----------CHHHHHHHHH-------------
Confidence 3444554443 233479999999999999999985 4566 445554 3333322221
Q ss_pred ccCCceEeCC----CCccc----cccceeecCCcc---cccchhhHhhhhccCceEEEecCCCCCCHHHHHHHHhCCc
Q 008128 482 TYARSKYYDE----AKPWN----ERCDVAFPCASQ---NEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANV 548 (577)
Q Consensus 482 ~~p~a~~i~~----~eil~----~~cDIlIPcA~~---n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI 548 (577)
.+|++..+-+ .++|. .++|+++-++-. |.+..--|+++ +++-++==.|. ++-.+++++-||
T Consensus 276 ~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~---gv~kvIa~vn~---~~~~~l~~~~gi 347 (461)
T 4g65_A 276 ELENTIVFCGDAADQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRM---GAKKVMVLIQR---GAYVDLVQGGVI 347 (461)
T ss_dssp HCTTSEEEESCTTCHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHT---TCSEEEEECSC---HHHHHHHCSSSS
T ss_pred HCCCceEEeccccchhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHc---CCccccccccc---cchhhhhhcccc
Confidence 1233333322 22342 489999988874 55556777777 77666555564 355566666665
No 321
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=83.94 E-value=1 Score=44.81 Aligned_cols=37 Identities=14% Similarity=0.319 Sum_probs=32.3
Q ss_pred CCCCCCceEEEEec-chHHHHHHHHHHHCCCeEEEEEc
Q 008128 411 NKELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 411 g~~l~GkrVaIQGf-GNVG~~aA~~L~e~GAkVVaISD 447 (577)
-.++++++|+|.|. |-+|+++++.|.+.|++|+++.-
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEEC
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 35789999999995 99999999999999999877653
No 322
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=83.88 E-value=0.93 Score=46.30 Aligned_cols=31 Identities=19% Similarity=0.225 Sum_probs=28.5
Q ss_pred CceEEEEecchHHHHHHHHHHHCCCeEEEEE
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~GAkVVaIS 446 (577)
|++|+|.|.|.||..+++.+...|++|+++.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~ 211 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMAN 211 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEe
Confidence 9999999999999999999999999977654
No 323
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=83.85 E-value=4.1 Score=41.29 Aligned_cols=75 Identities=9% Similarity=0.192 Sum_probs=46.2
Q ss_pred CceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCcc
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW 495 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil 495 (577)
-|+|.|.|.|.+|...|..|. .|..| .+.|. +.+++..+.+. +.+ ....+.++.++-+-
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V-~v~d~----------~~~~~~~~~~~------l~~--~~~~~i~~~~~~~~- 70 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEV-VLQDV----------SEKALEAAREQ------IPE--ELLSKIEFTTTLEK- 70 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEE-EEECS----------CHHHHHHHHHH------SCG--GGGGGEEEESSCTT-
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEE-EEEEC----------CHHHHHHHHHH------HHH--HHhCCeEEeCCHHH-
Confidence 479999999999999999999 99984 55564 33444333222 110 00012222222111
Q ss_pred ccccceeecCCccccc
Q 008128 496 NERCDVAFPCASQNEI 511 (577)
Q Consensus 496 ~~~cDIlIPcA~~n~I 511 (577)
-.+||++|.|..++.-
T Consensus 71 ~~~aDlVieavpe~~~ 86 (293)
T 1zej_A 71 VKDCDIVMEAVFEDLN 86 (293)
T ss_dssp GGGCSEEEECCCSCHH
T ss_pred HcCCCEEEEcCcCCHH
Confidence 3589999999887653
No 324
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=83.80 E-value=1.4 Score=43.32 Aligned_cols=34 Identities=15% Similarity=0.225 Sum_probs=30.2
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~ 46 (291)
T 3rd5_A 12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMA 46 (291)
T ss_dssp CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence 468999999998 5899999999999999997654
No 325
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=83.77 E-value=1.2 Score=42.49 Aligned_cols=36 Identities=14% Similarity=0.224 Sum_probs=29.9
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
+++||+++|.| .|-+|.++|+.|.+.|+++|.+.+.
T Consensus 2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r 38 (254)
T 1sby_A 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDR 38 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEES
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEec
Confidence 57899999998 6899999999999999973444554
No 326
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=83.73 E-value=1.4 Score=42.66 Aligned_cols=34 Identities=26% Similarity=0.289 Sum_probs=29.9
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.+++|++++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 37 (260)
T 1nff_A 3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFG 37 (260)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 458899999998 6999999999999999997654
No 327
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=83.68 E-value=0.56 Score=48.31 Aligned_cols=93 Identities=18% Similarity=0.233 Sum_probs=53.5
Q ss_pred ceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCcc
Q 008128 417 LRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW 495 (577)
Q Consensus 417 krVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil 495 (577)
.+|+|.| +|.||+.+.+.|.+.+..++.+...... ...| ..+. +...--.....+.. .|
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~--~~~g----------------~~l~-~~g~~i~v~~~~~~-~~ 60 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASP--RSAG----------------VRLA-FRGEEIPVEPLPEG-PL 60 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECG--GGSS----------------CEEE-ETTEEEEEEECCSS-CC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeecc--ccCC----------------CEEE-EcCceEEEEeCChh-hc
Confidence 3799999 9999999999998766443322110000 0011 0111 00000001111222 36
Q ss_pred ccccceeecCCcccccchhhHhhhhccCceEEEecCC
Q 008128 496 NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (577)
Q Consensus 496 ~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (577)
.||+++-|+ +...+.+.++.+++.+|++|-=++-
T Consensus 61 --~~DvV~~a~-g~~~s~~~a~~~~~~G~~vId~s~~ 94 (331)
T 2yv3_A 61 --PVDLVLASA-GGGISRAKALVWAEGGALVVDNSSA 94 (331)
T ss_dssp --CCSEEEECS-HHHHHHHHHHHHHHTTCEEEECSSS
T ss_pred --CCCEEEECC-CccchHHHHHHHHHCCCEEEECCCc
Confidence 899999876 4556788888888888988876654
No 328
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=83.63 E-value=1.4 Score=42.45 Aligned_cols=35 Identities=26% Similarity=0.319 Sum_probs=29.9
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~ 38 (257)
T 3tpc_A 3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLD 38 (257)
T ss_dssp -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 468999999998 58999999999999999976543
No 329
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=83.59 E-value=3.1 Score=43.15 Aligned_cols=104 Identities=13% Similarity=0.199 Sum_probs=62.7
Q ss_pred ceEEEEe-cchHHHHHHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEe-CCCC
Q 008128 417 LRCVVSG-SGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAK 493 (577)
Q Consensus 417 krVaIQG-fGNVG~~aA~~L~e-~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i-~~~e 493 (577)
.+|+|.| .|.||+.+.+.|.+ ....++++..+++. ...|-.+.++ + ..+.+.. .. ..+.. +.++
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~--~saGk~~~~~-----~----p~~~~~~-~~-~v~~~~~~~~ 71 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQS--NDAGKLISDL-----H----PQLKGIV-EL-PLQPMSDISE 71 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTC--TTTTSBHHHH-----C----GGGTTTC-CC-BEEEESSGGG
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCch--hhcCCchHHh-----C----ccccCcc-ce-eEeccCCHHH
Confidence 5899999 69999999999988 45677777554211 1334333221 0 0111100 00 01111 1122
Q ss_pred ccccccceeecCCcccccchhhHhhhhccCceEEEecCCCCC
Q 008128 494 PWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC 535 (577)
Q Consensus 494 il~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~ 535 (577)
+..+|||++-|. ....+.+-++.+++.+|++|-=.|..-.
T Consensus 72 -~~~~~Dvvf~a~-p~~~s~~~~~~~~~~g~~vIDlSa~fR~ 111 (337)
T 3dr3_A 72 -FSPGVDVVFLAT-AHEVSHDLAPQFLEAGCVVFDLSGAFRV 111 (337)
T ss_dssp -TCTTCSEEEECS-CHHHHHHHHHHHHHTTCEEEECSSTTSS
T ss_pred -HhcCCCEEEECC-ChHHHHHHHHHHHHCCCEEEEcCCcccc
Confidence 224899999775 5667888888888889998887776544
No 330
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=83.59 E-value=2.7 Score=42.51 Aligned_cols=116 Identities=14% Similarity=0.249 Sum_probs=66.9
Q ss_pred ceEEEEec-chHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCcc
Q 008128 417 LRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW 495 (577)
Q Consensus 417 krVaIQGf-GNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil 495 (577)
.+++|+|. |+.|+..++.|.+.|.++|+-.+.... |- ++ . .+.- |+.. +++.
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP~~~-----g~---~i---------~-G~~v----y~sl-----~el~ 66 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKG-----GQ---NV---------H-GVPV----FDTV-----KEAV 66 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCEEEEECTTCT-----TC---EE---------T-TEEE----ESSH-----HHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCeEEEEeCCCCC-----Cc---eE---------C-CEee----eCCH-----HHHh
Confidence 46888997 999999999999999887655544200 10 00 0 0111 1111 1121
Q ss_pred -ccccceeecCCcccccchhhHhhhhccCceEEEecC-CCCCC--HHHHHHHHhCCcEEe-cchhccccceeeh
Q 008128 496 -NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGS-NMPCT--PEAVDVLKKANVLIA-PAMAAGAGGVRYS 564 (577)
Q Consensus 496 -~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgA-N~p~T--~eA~~iL~~rGI~vi-PD~~aNAGGVivS 564 (577)
..++|+++-|... ....+.+...++.+++.|+..+ ..+.+ .+..++.++.|+.++ |. +-|++..
T Consensus 67 ~~~~~Dv~ii~vp~-~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~viGPN----c~Gii~~ 135 (294)
T 2yv1_A 67 KETDANASVIFVPA-PFAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVGVKIIGPN----TPGIASP 135 (294)
T ss_dssp HHHCCCEEEECCCH-HHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEECSS----CCEEEET
T ss_pred hcCCCCEEEEccCH-HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEcCC----Cceeecc
Confidence 1267888876543 3456677777777999555543 33322 134466678899665 53 4455543
No 331
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=83.50 E-value=1.5 Score=39.70 Aligned_cols=32 Identities=13% Similarity=0.202 Sum_probs=28.2
Q ss_pred CceEEEEec-chHHHHHHHHHHHCCCeEEEEEc
Q 008128 416 GLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 416 GkrVaIQGf-GNVG~~aA~~L~e~GAkVVaISD 447 (577)
+++|+|.|. |.+|+++++.|.+.|.+|++++-
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r 35 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVR 35 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe
Confidence 479999996 99999999999999999877654
No 332
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=83.34 E-value=2.9 Score=44.63 Aligned_cols=31 Identities=13% Similarity=0.092 Sum_probs=26.5
Q ss_pred ceEEEEecchHHHHHHHHHHHC--CCeEEEEEcC
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY--GAIPVSVSDA 448 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~--GAkVVaISDs 448 (577)
++|+|.|.|.||..+|..|.+. |..|+ +.|.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~-~~d~ 38 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVT-VVDV 38 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEE-EECS
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEE-EEEC
Confidence 5899999999999999999998 78854 4565
No 333
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=83.32 E-value=1.4 Score=42.92 Aligned_cols=37 Identities=27% Similarity=0.371 Sum_probs=31.1
Q ss_pred CCCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 411 g~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
..+++||+++|.| .|-+|.++|+.|.+.|++|+. .|.
T Consensus 6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~-~~r 43 (271)
T 3tzq_B 6 TAELENKVAIITGACGGIGLETSRVLARAGARVVL-ADL 43 (271)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EEC
T ss_pred CcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EcC
Confidence 3578999999998 589999999999999999664 454
No 334
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=83.29 E-value=1.4 Score=42.48 Aligned_cols=34 Identities=26% Similarity=0.507 Sum_probs=29.8
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.+++||+++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 37 (262)
T 1zem_A 3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALL 37 (262)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 468899999998 6899999999999999996654
No 335
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=83.28 E-value=1.4 Score=44.30 Aligned_cols=40 Identities=20% Similarity=0.367 Sum_probs=31.0
Q ss_pred HHcCCCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 408 ADMNKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 408 ~~~g~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
+.+...|+||+++|.| .+-+|..+|+.|.+.|++| .++|.
T Consensus 21 ~~Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V-~i~~r 61 (273)
T 4fgs_A 21 QSMTQRLNAKIAVITGATSGIGLAAAKRFVAEGARV-FITGR 61 (273)
T ss_dssp ----CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEE-EEEES
T ss_pred hhhcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEE-EEEEC
Confidence 3445569999999998 4779999999999999995 45665
No 336
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=83.27 E-value=1.5 Score=42.02 Aligned_cols=35 Identities=17% Similarity=0.225 Sum_probs=30.6
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
.+++||+++|.| .|.+|.++++.|.+.|++|+.+.
T Consensus 3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~ 38 (250)
T 2fwm_X 3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFD 38 (250)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 357899999998 59999999999999999977654
No 337
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=83.23 E-value=1.5 Score=42.99 Aligned_cols=35 Identities=23% Similarity=0.241 Sum_probs=31.2
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~ 62 (273)
T 3uf0_A 27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWG 62 (273)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEc
Confidence 478999999998 58999999999999999977665
No 338
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=83.19 E-value=1.5 Score=42.10 Aligned_cols=34 Identities=24% Similarity=0.426 Sum_probs=30.3
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.++++++++|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~ 46 (278)
T 2bgk_A 12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIA 46 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 467899999998 6999999999999999997765
No 339
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=83.17 E-value=2.1 Score=43.66 Aligned_cols=108 Identities=10% Similarity=0.075 Sum_probs=64.1
Q ss_pred CCCceEEEE-ec-chHHHHHHHHHHHCCCeEEEEEcCC--CeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEe
Q 008128 414 LKGLRCVVS-GS-GKIAMHVLEKLIAYGAIPVSVSDAK--GYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (577)
Q Consensus 414 l~GkrVaIQ-Gf-GNVG~~aA~~L~e~GAkVVaISDs~--G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i 489 (577)
+..++++|. |+ |+.|...++.|.+.|.++|...+.+ |.-+ .|+ .- |+..
T Consensus 11 ~~~~siaVV~Gasg~~G~~~~~~l~~~G~~~v~~VnP~~~g~~i--~G~------------------~v----y~sl--- 63 (305)
T 2fp4_A 11 VDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTH--LGL------------------PV----FNTV--- 63 (305)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEE--TTE------------------EE----ESSH---
T ss_pred hCCCcEEEEECCCCCHHHHHHHHHHHCCCcEEEEeCCCcCcceE--CCe------------------ee----echH---
Confidence 455666665 98 9999999999999999977555542 1000 111 11 1111
Q ss_pred CCCCcc-ccccceeecCCcccccchhhHhhhhccCceEEEecCCCC-CCH--HHHHHHHhC-CcEEe
Q 008128 490 DEAKPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMP-CTP--EAVDVLKKA-NVLIA 551 (577)
Q Consensus 490 ~~~eil-~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p-~T~--eA~~iL~~r-GI~vi 551 (577)
+++. ..++|+.+-|.. .....+.+..+++.+++.|+.-+-+. ... +..+..+++ |+.++
T Consensus 64 --~el~~~~~vD~avI~vP-~~~~~~~~~e~i~~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~li 127 (305)
T 2fp4_A 64 --KEAKEQTGATASVIYVP-PPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGKTRLI 127 (305)
T ss_dssp --HHHHHHHCCCEEEECCC-HHHHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHTTCSSCEEE
T ss_pred --HHhhhcCCCCEEEEecC-HHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHhcCCcEEE
Confidence 1111 125677765543 33445666667777888866655443 333 556777888 98876
No 340
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=83.16 E-value=1.5 Score=42.02 Aligned_cols=34 Identities=21% Similarity=0.286 Sum_probs=30.0
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~ 39 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIV 39 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence 578999999998 5889999999999999996654
No 341
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=83.14 E-value=3.4 Score=44.44 Aligned_cols=31 Identities=16% Similarity=0.133 Sum_probs=26.1
Q ss_pred ceEEEEecchHHHHHHHHHHHC--CCeEEEEEcC
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAY--GAIPVSVSDA 448 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~--GAkVVaISDs 448 (577)
++|+|.|.|.||..+|..|.+. |..|+ +.|.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~-~~D~ 42 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVT-VVDM 42 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEE-EEEC
Confidence 5899999999999999999998 67755 4564
No 342
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=83.10 E-value=1.5 Score=42.27 Aligned_cols=34 Identities=29% Similarity=0.433 Sum_probs=30.0
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.+++||+++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~ 39 (260)
T 2ae2_A 5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTC 39 (260)
T ss_dssp TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 368899999998 6899999999999999997654
No 343
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=83.09 E-value=1.5 Score=42.73 Aligned_cols=35 Identities=20% Similarity=0.220 Sum_probs=30.5
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~ 37 (274)
T 3e03_A 2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAA 37 (274)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 468999999998 58999999999999999966543
No 344
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=82.99 E-value=1.5 Score=43.07 Aligned_cols=36 Identities=25% Similarity=0.299 Sum_probs=31.1
Q ss_pred CCCCCCceEEEEec---chHHHHHHHHHHHCCCeEEEEE
Q 008128 411 NKELKGLRCVVSGS---GKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 411 g~~l~GkrVaIQGf---GNVG~~aA~~L~e~GAkVVaIS 446 (577)
..+++||+++|.|. |-+|.++|+.|.+.|++|+.+.
T Consensus 3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~ 41 (297)
T 1d7o_A 3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGT 41 (297)
T ss_dssp CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEE
T ss_pred ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEee
Confidence 35689999999996 6899999999999999977653
No 345
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=82.98 E-value=0.96 Score=44.94 Aligned_cols=35 Identities=29% Similarity=0.394 Sum_probs=30.7
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
+|+||+++|.| .+-+|..+|+.|.+.|++| .+.|.
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~V-vi~~~ 41 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARV-ILNDI 41 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEE-EECCS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE-EEEEC
Confidence 79999999998 5789999999999999995 56665
No 346
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=82.86 E-value=1.5 Score=42.88 Aligned_cols=35 Identities=20% Similarity=0.257 Sum_probs=30.4
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
.+++|++++|.| .|.+|+++|+.|.+.|++|+.++
T Consensus 22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~ 57 (302)
T 1w6u_A 22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIAS 57 (302)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEe
Confidence 358899999998 69999999999999999976553
No 347
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=82.84 E-value=0.98 Score=44.84 Aligned_cols=37 Identities=19% Similarity=0.177 Sum_probs=27.8
Q ss_pred CCCCCceEEEEec-chHHHHHHHHHHHCCCeEEEEEcC
Q 008128 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aA~~L~e~GAkVVaISDs 448 (577)
.+.++++|+|.|. |.+|+++++.|.+.|++|+++.-.
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCC
Confidence 4678899999996 999999999999999998877543
No 348
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=82.80 E-value=1.1 Score=43.67 Aligned_cols=35 Identities=26% Similarity=0.364 Sum_probs=28.9
Q ss_pred CCCCceEEEEec-chHHHHHHHHHHHCCCeEEEEEc
Q 008128 413 ELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 413 ~l~GkrVaIQGf-GNVG~~aA~~L~e~GAkVVaISD 447 (577)
++.+++|+|.|. |.+|+++++.|.+.|.+|++++-
T Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 39 (321)
T 3vps_A 4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDD 39 (321)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECC
T ss_pred ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEec
Confidence 456899999996 99999999999999999877654
No 349
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=82.78 E-value=2 Score=42.69 Aligned_cols=89 Identities=13% Similarity=0.134 Sum_probs=51.5
Q ss_pred CCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeC-C
Q 008128 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-E 491 (577)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~-~ 491 (577)
--.|.+|+|.|.|.||..+++.+...|++|+++. + ++ +++.++++ |. .. .+. .
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~------~~-----~~~~~~~l----Ga-~~---------v~~d~ 193 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-A------SL-----SQALAAKR----GV-RH---------LYREP 193 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-S------SC-----CHHHHHHH----TE-EE---------EESSG
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-C------hh-----hHHHHHHc----CC-CE---------EEcCH
Confidence 3468999999999999999999999999988876 4 12 22222221 21 10 111 1
Q ss_pred CCccccccceeecCCcccccchhhHhhhhccCceEEEec
Q 008128 492 AKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEG 530 (577)
Q Consensus 492 ~eil~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEg 530 (577)
+++ ...+|+++.|...... ..+-++++.+-++|.=|
T Consensus 194 ~~v-~~g~Dvv~d~~g~~~~--~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 194 SQV-TQKYFAIFDAVNSQNA--AALVPSLKANGHIICIQ 229 (315)
T ss_dssp GGC-CSCEEEEECC---------TTGGGEEEEEEEEEEC
T ss_pred HHh-CCCccEEEECCCchhH--HHHHHHhcCCCEEEEEe
Confidence 112 4578999999876544 33444445556666544
No 350
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=82.77 E-value=1.9 Score=39.62 Aligned_cols=33 Identities=18% Similarity=0.262 Sum_probs=28.8
Q ss_pred CCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 414 LKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 414 l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
-.|++|+|.| .|.+|..+++.+...|++|+++.
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~ 70 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTA 70 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEe
Confidence 3689999999 79999999999999999977653
No 351
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=82.76 E-value=1.2 Score=42.41 Aligned_cols=35 Identities=17% Similarity=0.192 Sum_probs=30.6
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
.++++++++|.| .|.+|+++++.|.+.|++|+.+.
T Consensus 10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~ 45 (265)
T 1h5q_A 10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIY 45 (265)
T ss_dssp ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEE
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEe
Confidence 368899999998 69999999999999999977654
No 352
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=82.76 E-value=1.2 Score=43.28 Aligned_cols=33 Identities=36% Similarity=0.412 Sum_probs=29.5
Q ss_pred CCCCceEEEEe---cchHHHHHHHHHHHCCCeEEEE
Q 008128 413 ELKGLRCVVSG---SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 413 ~l~GkrVaIQG---fGNVG~~aA~~L~e~GAkVVaI 445 (577)
+++||+++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~ 39 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLT 39 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEE
Confidence 57899999999 5999999999999999997654
No 353
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=82.65 E-value=1.6 Score=42.58 Aligned_cols=35 Identities=23% Similarity=0.318 Sum_probs=30.5
Q ss_pred CCCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 411 g~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
..+++||+++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~ 51 (267)
T 1vl8_A 16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVA 51 (267)
T ss_dssp -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 4678999999998 6899999999999999997654
No 354
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=82.63 E-value=1.3 Score=42.03 Aligned_cols=34 Identities=29% Similarity=0.286 Sum_probs=29.9
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
..++||+++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~ 44 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLL 44 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence 468999999998 5899999999999999996654
No 355
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=82.58 E-value=0.92 Score=44.72 Aligned_cols=40 Identities=20% Similarity=0.200 Sum_probs=26.1
Q ss_pred HHHHcCCCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 406 ILADMNKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 406 ~l~~~g~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
++.....+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 23 ~~~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~ 63 (281)
T 4dry_A 23 MMAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVIT 63 (281)
T ss_dssp -----------CEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cccccCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 333334678999999998 5889999999999999996654
No 356
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=82.58 E-value=1.6 Score=42.01 Aligned_cols=34 Identities=26% Similarity=0.327 Sum_probs=29.8
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.+++||+++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 42 (263)
T 3ak4_A 8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIA 42 (263)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence 357899999998 6899999999999999997654
No 357
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=82.56 E-value=1.3 Score=42.67 Aligned_cols=34 Identities=21% Similarity=0.162 Sum_probs=28.8
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.++++|+++|.| .|-+|..+|+.|.+.|++|+.+
T Consensus 3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~ 37 (250)
T 3nyw_A 3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLI 37 (250)
T ss_dssp --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEE
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 467899999998 5899999999999999997654
No 358
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=82.56 E-value=1.2 Score=43.80 Aligned_cols=33 Identities=18% Similarity=0.304 Sum_probs=27.8
Q ss_pred CCCceEEEEec-chHHHHHHHHHHHCCCeEEEEE
Q 008128 414 LKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 414 l~GkrVaIQGf-GNVG~~aA~~L~e~GAkVVaIS 446 (577)
++|++|+|.|. |-+|+++++.|.+.|++|+++.
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~ 34 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGAD 34 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEE
Confidence 35789999995 9999999999999999977654
No 359
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=82.48 E-value=1.2 Score=42.10 Aligned_cols=35 Identities=20% Similarity=0.365 Sum_probs=30.2
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
.+++|++++|.| .|.+|+++++.|.+.|++|+.+.
T Consensus 2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~ 37 (251)
T 1zk4_A 2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITG 37 (251)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 357899999998 69999999999999999976553
No 360
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=82.47 E-value=1.5 Score=42.47 Aligned_cols=35 Identities=20% Similarity=0.144 Sum_probs=30.2
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
+++||+++|.| .|-+|.++|+.|.+.|++|+.+ |.
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~~ 42 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILF-DI 42 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-EC
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEE-cc
Confidence 58899999998 5889999999999999996644 44
No 361
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=82.45 E-value=1.5 Score=42.21 Aligned_cols=36 Identities=33% Similarity=0.475 Sum_probs=30.7
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+ +.|.
T Consensus 2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~-~~~r 38 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVI-VSDI 38 (247)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EECS
T ss_pred CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 468999999998 58899999999999999965 4454
No 362
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=82.36 E-value=1.6 Score=42.92 Aligned_cols=35 Identities=26% Similarity=0.302 Sum_probs=30.4
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~ 63 (276)
T 3r1i_A 28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAA 63 (276)
T ss_dssp GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 468999999998 58999999999999999966543
No 363
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=82.35 E-value=1.8 Score=41.68 Aligned_cols=34 Identities=24% Similarity=0.270 Sum_probs=29.7
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
..++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~ 42 (252)
T 3f1l_A 8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILL 42 (252)
T ss_dssp TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence 458999999998 5889999999999999996654
No 364
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=82.31 E-value=1 Score=44.57 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=28.2
Q ss_pred CCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEc
Q 008128 414 LKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 414 l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISD 447 (577)
+++++|.|.| .|-+|+++++.|.+.|++|+++..
T Consensus 3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r 37 (337)
T 2c29_D 3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVR 37 (337)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEC
Confidence 4789999999 899999999999999999887654
No 365
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=82.23 E-value=1.7 Score=42.18 Aligned_cols=35 Identities=23% Similarity=0.225 Sum_probs=30.2
Q ss_pred CCCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 411 g~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
..+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 43 (278)
T 3sx2_A 8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAV 43 (278)
T ss_dssp -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEE
Confidence 3578999999998 5899999999999999997654
No 366
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=82.22 E-value=1.3 Score=43.28 Aligned_cols=36 Identities=39% Similarity=0.574 Sum_probs=31.2
Q ss_pred CCCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 411 g~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
..+++||+|+|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~ 45 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVS 45 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 4688999999998 58899999999999999977654
No 367
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=82.14 E-value=1.4 Score=42.81 Aligned_cols=34 Identities=26% Similarity=0.358 Sum_probs=29.7
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
+++|++++|.| .|.+|+++++.|.+.|++|+.+.
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~ 63 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCA 63 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEE
Confidence 47899999998 69999999999999999976553
No 368
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=82.13 E-value=1.7 Score=41.91 Aligned_cols=33 Identities=21% Similarity=0.370 Sum_probs=29.3
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
+++||+++|.| .|-+|+++|+.|.+.|++|+.+
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 35 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLA 35 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 57899999998 5999999999999999997654
No 369
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=82.12 E-value=1.6 Score=42.54 Aligned_cols=34 Identities=15% Similarity=0.205 Sum_probs=29.9
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~ 41 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICD 41 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEe
Confidence 68999999998 68899999999999999966543
No 370
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=82.08 E-value=1.1 Score=43.13 Aligned_cols=32 Identities=19% Similarity=0.051 Sum_probs=28.9
Q ss_pred CceEEEEecchHHHHHHHHHHHCCCeEEEEEc
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISD 447 (577)
.++|.|.|.|.+|+++++.|.+.|.+|++++-
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r 36 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSR 36 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEES
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEc
Confidence 37999999999999999999999999887754
No 371
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=82.07 E-value=1.3 Score=42.47 Aligned_cols=36 Identities=25% Similarity=0.189 Sum_probs=31.5
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEc
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISD 447 (577)
.++++++|+|.| .|.+|+++++.|.+.|++|+.+..
T Consensus 17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r 53 (274)
T 1ja9_A 17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYG 53 (274)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 468899999998 699999999999999999876654
No 372
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=82.06 E-value=1.5 Score=42.96 Aligned_cols=35 Identities=29% Similarity=0.390 Sum_probs=30.7
Q ss_pred CCCCceEEEEec-chHHHHHHHHHHHCCCeEEEEEc
Q 008128 413 ELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 413 ~l~GkrVaIQGf-GNVG~~aA~~L~e~GAkVVaISD 447 (577)
.+++++|+|.|. |-+|+++++.|.+.|++|+++..
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r 43 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTAR 43 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 467899999995 99999999999999999876653
No 373
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=82.05 E-value=1.8 Score=41.45 Aligned_cols=33 Identities=27% Similarity=0.315 Sum_probs=29.3
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~ 35 (245)
T 1uls_A 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVAC 35 (245)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 47899999998 5899999999999999997654
No 374
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=82.04 E-value=2.3 Score=43.56 Aligned_cols=115 Identities=14% Similarity=0.216 Sum_probs=65.3
Q ss_pred CCceEEEEe-cchHHHH-HH----HHHHHCC-CeE-----E----EEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccc
Q 008128 415 KGLRCVVSG-SGKIAMH-VL----EKLIAYG-AIP-----V----SVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRD 478 (577)
Q Consensus 415 ~GkrVaIQG-fGNVG~~-aA----~~L~e~G-AkV-----V----aISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~ 478 (577)
+-.||.|.| +|.+|.. .+ +.+.+.+ ..+ + +|+|. |.++. .+..+..+.
T Consensus 5 ~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~----------~~~~a---~~~a~~~~~--- 68 (383)
T 3oqb_A 5 QRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGR----------SAEKV---EALAKRFNI--- 68 (383)
T ss_dssp EEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECS----------SSHHH---HHHHHHTTC---
T ss_pred ceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcC----------CHHHH---HHHHHHhCC---
Confidence 345899999 9999996 44 5665544 221 1 46665 22332 222222211
Q ss_pred cccccCCceEe-CCCCcc-ccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHHHHH---HhCCcEEecc
Q 008128 479 YSKTYARSKYY-DEAKPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVL---KKANVLIAPA 553 (577)
Q Consensus 479 y~~~~p~a~~i-~~~eil-~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL---~~rGI~viPD 553 (577)
.... +-++++ +.++|+++-|+ .+..+.+.+...++.|..+++|=-=..+..++++++ +++|+.+...
T Consensus 69 -------~~~~~~~~~ll~~~~iD~V~i~t-p~~~h~~~~~~al~~Gk~V~~EKP~a~~~~~~~~l~~~a~~~~~~~~v~ 140 (383)
T 3oqb_A 69 -------ARWTTDLDAALADKNDTMFFDAA-TTQARPGLLTQAINAGKHVYCEKPIATNFEEALEVVKLANSKGVKHGTV 140 (383)
T ss_dssp -------CCEESCHHHHHHCSSCCEEEECS-CSSSSHHHHHHHHTTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred -------CcccCCHHHHhcCCCCCEEEECC-CchHHHHHHHHHHHCCCeEEEcCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 0112 224455 34689888554 557788888888888989998731111223454433 5677755433
No 375
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=81.97 E-value=1.4 Score=42.99 Aligned_cols=36 Identities=14% Similarity=0.161 Sum_probs=28.5
Q ss_pred CCCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 411 g~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
+.++.+|+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 11 ~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~ 47 (266)
T 3p19_A 11 GRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLA 47 (266)
T ss_dssp ----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEE
Confidence 4568899999998 58999999999999999977553
No 376
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=81.95 E-value=1.7 Score=42.09 Aligned_cols=33 Identities=18% Similarity=0.381 Sum_probs=29.4
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~ 38 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLT 38 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 58899999998 5899999999999999997654
No 377
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=81.93 E-value=1.7 Score=42.64 Aligned_cols=33 Identities=18% Similarity=0.418 Sum_probs=29.4
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~ 35 (281)
T 3zv4_A 2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVL 35 (281)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEE
Confidence 57899999998 6899999999999999997654
No 378
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=81.91 E-value=2.4 Score=45.46 Aligned_cols=32 Identities=19% Similarity=0.288 Sum_probs=27.9
Q ss_pred CceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
..|++|.|.|.||..+|..|.+.|..|+ +.|.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~-~~D~ 39 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVV-CVDK 39 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEE-EECS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 3699999999999999999999999965 4565
No 379
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=81.87 E-value=1.8 Score=41.76 Aligned_cols=36 Identities=25% Similarity=0.366 Sum_probs=30.6
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
.+++||+++|.| .|-+|+++|+.|.+.|++|+. .|.
T Consensus 4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r 40 (259)
T 4e6p_A 4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAI-ADI 40 (259)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeC
Confidence 358899999998 689999999999999999664 444
No 380
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=81.87 E-value=1.7 Score=41.85 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=29.6
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
+++||+++|.| .|.+|.++|+.|.+.|++|+.+.
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 37 (256)
T 2d1y_A 3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCD 37 (256)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 47899999998 68999999999999999976543
No 381
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=81.87 E-value=1.9 Score=42.18 Aligned_cols=37 Identities=24% Similarity=0.243 Sum_probs=31.8
Q ss_pred CCCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEc
Q 008128 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 411 g~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISD 447 (577)
..+++||+++|.| .|-+|.++|+.|.+.|++|+.+..
T Consensus 26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~ 63 (271)
T 3v2g_A 26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYV 63 (271)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 3578999999998 588999999999999999776544
No 382
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=81.79 E-value=1.7 Score=42.38 Aligned_cols=34 Identities=21% Similarity=0.216 Sum_probs=30.3
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~ 45 (280)
T 3pgx_A 11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIAC 45 (280)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 468999999998 5899999999999999997654
No 383
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=81.76 E-value=1.9 Score=42.12 Aligned_cols=35 Identities=20% Similarity=0.204 Sum_probs=30.7
Q ss_pred CCCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 411 g~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
..+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 6 ~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~ 41 (286)
T 3uve_A 6 TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAV 41 (286)
T ss_dssp CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEE
Confidence 4578999999999 5889999999999999997655
No 384
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=81.71 E-value=1.2 Score=42.24 Aligned_cols=34 Identities=21% Similarity=0.285 Sum_probs=29.9
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.+++|++|+|.| .|.+|+++++.|.+.|++|+.+
T Consensus 7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~ 41 (255)
T 1fmc_A 7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVS 41 (255)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEE
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEE
Confidence 458899999998 5999999999999999997654
No 385
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=81.69 E-value=1.1 Score=42.39 Aligned_cols=34 Identities=26% Similarity=0.318 Sum_probs=29.7
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
+++|++|+|.| .|-+|+++++.|.+.|++|+.+.
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~ 38 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHG 38 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEC
Confidence 57899999998 69999999999999999976554
No 386
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=81.63 E-value=1.5 Score=42.25 Aligned_cols=34 Identities=29% Similarity=0.362 Sum_probs=29.9
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~ 39 (248)
T 3op4_A 5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGT 39 (248)
T ss_dssp TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 468999999998 5889999999999999997654
No 387
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=81.62 E-value=1.2 Score=42.65 Aligned_cols=35 Identities=29% Similarity=0.361 Sum_probs=29.8
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
+++||+++|.| .|.+|.++|+.|.+.|++|+. .+.
T Consensus 1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~-~~r 36 (255)
T 2q2v_A 1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVL-NGF 36 (255)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEE-ECS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EeC
Confidence 46899999998 599999999999999999665 444
No 388
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=81.60 E-value=2.2 Score=44.48 Aligned_cols=105 Identities=11% Similarity=0.154 Sum_probs=61.5
Q ss_pred CceEEEEe-cchHHHHHHHHHHHCC-CeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCC
Q 008128 416 GLRCVVSG-SGKIAMHVLEKLIAYG-AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAK 493 (577)
Q Consensus 416 GkrVaIQG-fGNVG~~aA~~L~e~G-AkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~e 493 (577)
..+|+|.| .|.||+.+.++|.+.- ..++.++.. ...|-.+.++ ..++ ....+....... ..+..+.+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~-----~saGk~~~~~---~p~~-~~~~~~~~~~~~-~v~~~~~~- 75 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGK-----GSVGKPYGEV---VRWQ-TVGQVPKEIADM-EIKPTDPK- 75 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEES-----TTTTSBHHHH---CCCC-SSSCCCHHHHTC-BCEECCGG-
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECc-----hhcCCChhHh---cccc-cccccccccccc-eEEeCCHH-
Confidence 46899999 6999999999887643 567766554 3445443221 0000 000000000000 11111212
Q ss_pred ccccccceeecCCcccccchhhHhhhhccCceEEEecCCC
Q 008128 494 PWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNM 533 (577)
Q Consensus 494 il~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~ 533 (577)
.+ .+|||++-|+ ....+.+-++.+++.+|++|-=+|..
T Consensus 76 ~~-~~vDvvf~a~-p~~~s~~~a~~~~~~G~~vIDlSa~~ 113 (359)
T 4dpl_A 76 LM-DDVDIIFSPL-PQGAAGPVEEQFAKEGFPVISNSPDH 113 (359)
T ss_dssp GC-TTCCEEEECC-CTTTHHHHHHHHHHTTCEEEECSSTT
T ss_pred Hh-cCCCEEEECC-ChHHHHHHHHHHHHCCCEEEEcCCCc
Confidence 22 4899999986 56667888888888899998877654
No 389
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=81.60 E-value=2.2 Score=44.48 Aligned_cols=105 Identities=11% Similarity=0.154 Sum_probs=61.5
Q ss_pred CceEEEEe-cchHHHHHHHHHHHCC-CeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCC
Q 008128 416 GLRCVVSG-SGKIAMHVLEKLIAYG-AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAK 493 (577)
Q Consensus 416 GkrVaIQG-fGNVG~~aA~~L~e~G-AkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~e 493 (577)
..+|+|.| .|.||+.+.++|.+.- ..++.++.. ...|-.+.++ ..++ ....+....... ..+..+.+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~-----~saGk~~~~~---~p~~-~~~~~~~~~~~~-~v~~~~~~- 75 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGK-----GSVGKPYGEV---VRWQ-TVGQVPKEIADM-EIKPTDPK- 75 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEES-----TTTTSBHHHH---CCCC-SSSCCCHHHHTC-BCEECCGG-
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECc-----hhcCCChhHh---cccc-cccccccccccc-eEEeCCHH-
Confidence 46899999 6999999999887643 567766554 3445443221 0000 000000000000 11111212
Q ss_pred ccccccceeecCCcccccchhhHhhhhccCceEEEecCCC
Q 008128 494 PWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNM 533 (577)
Q Consensus 494 il~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~ 533 (577)
.+ .+|||++-|+ ....+.+-++.+++.+|++|-=+|..
T Consensus 76 ~~-~~vDvvf~a~-p~~~s~~~a~~~~~~G~~vIDlSa~~ 113 (359)
T 4dpk_A 76 LM-DDVDIIFSPL-PQGAAGPVEEQFAKEGFPVISNSPDH 113 (359)
T ss_dssp GC-TTCCEEEECC-CTTTHHHHHHHHHHTTCEEEECSSTT
T ss_pred Hh-cCCCEEEECC-ChHHHHHHHHHHHHCCCEEEEcCCCc
Confidence 22 4899999986 56667888888888899998877654
No 390
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=81.58 E-value=1.9 Score=42.42 Aligned_cols=35 Identities=26% Similarity=0.366 Sum_probs=30.7
Q ss_pred CCCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 411 g~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
..+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 22 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~ 57 (277)
T 4dqx_A 22 SMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVA 57 (277)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 4678999999998 5899999999999999997644
No 391
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=81.52 E-value=1.8 Score=41.89 Aligned_cols=35 Identities=20% Similarity=0.161 Sum_probs=29.8
Q ss_pred CCCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 411 g~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
...++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~ 41 (264)
T 3ucx_A 6 GGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLA 41 (264)
T ss_dssp -CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEE
T ss_pred CCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEE
Confidence 3468999999998 5789999999999999996654
No 392
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=81.46 E-value=1.8 Score=41.88 Aligned_cols=34 Identities=18% Similarity=0.192 Sum_probs=29.5
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.+++||+++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 43 (267)
T 1iy8_A 9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLV 43 (267)
T ss_dssp -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 358899999998 6999999999999999997654
No 393
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=81.45 E-value=1.9 Score=40.16 Aligned_cols=33 Identities=21% Similarity=0.198 Sum_probs=28.8
Q ss_pred CCCceEEEEe-cchHHHHHHHHHHHC--CCeEEEEE
Q 008128 414 LKGLRCVVSG-SGKIAMHVLEKLIAY--GAIPVSVS 446 (577)
Q Consensus 414 l~GkrVaIQG-fGNVG~~aA~~L~e~--GAkVVaIS 446 (577)
.++++|+|.| .|.+|+++++.|.+. |++|++++
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~ 37 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLV 37 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEE
Confidence 4678999999 699999999999999 88977664
No 394
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=81.44 E-value=1.8 Score=42.84 Aligned_cols=34 Identities=24% Similarity=0.271 Sum_probs=30.0
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~ 77 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIA 77 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 468999999998 5899999999999999996644
No 395
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=81.39 E-value=1.7 Score=43.67 Aligned_cols=34 Identities=18% Similarity=0.401 Sum_probs=29.8
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.+++|++|+|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~ 38 (319)
T 3ioy_A 4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIA 38 (319)
T ss_dssp CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEE
Confidence 367899999998 5899999999999999996654
No 396
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=81.38 E-value=1.9 Score=41.37 Aligned_cols=33 Identities=27% Similarity=0.317 Sum_probs=29.2
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
+++||+++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~ 37 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGAAVAIA 37 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 57899999998 6899999999999999996654
No 397
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=81.35 E-value=1.5 Score=42.64 Aligned_cols=38 Identities=29% Similarity=0.393 Sum_probs=31.9
Q ss_pred cCCCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 410 MNKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 410 ~g~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
+..+++||+++|.| .|-+|.++|+.|.+.|++|+.+ |.
T Consensus 4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~-~r 42 (267)
T 3t4x_A 4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLIN-GR 42 (267)
T ss_dssp CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE-ES
T ss_pred cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-eC
Confidence 34678999999998 5889999999999999996644 44
No 398
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=81.33 E-value=1.8 Score=43.43 Aligned_cols=37 Identities=16% Similarity=0.242 Sum_probs=32.3
Q ss_pred CCCCCCceEEEEe-cchHHHHHHHHHHH--CCCeEEEEEc
Q 008128 411 NKELKGLRCVVSG-SGKIAMHVLEKLIA--YGAIPVSVSD 447 (577)
Q Consensus 411 g~~l~GkrVaIQG-fGNVG~~aA~~L~e--~GAkVVaISD 447 (577)
..++++++|.|.| .|-+|+++++.|.+ .|++|+++.-
T Consensus 5 ~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r 44 (362)
T 3sxp_A 5 DDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDK 44 (362)
T ss_dssp SCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred chhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEEC
Confidence 3578899999997 69999999999999 8999887754
No 399
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=81.30 E-value=1.9 Score=41.76 Aligned_cols=36 Identities=28% Similarity=0.325 Sum_probs=30.9
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+. .|.
T Consensus 4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~-~~r 40 (265)
T 3lf2_A 4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAF-CAR 40 (265)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEE-EeC
Confidence 478999999998 588999999999999999654 454
No 400
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=81.22 E-value=1.5 Score=42.07 Aligned_cols=34 Identities=24% Similarity=0.301 Sum_probs=29.9
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.+++||+++|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 44 (260)
T 2zat_A 10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVS 44 (260)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 468899999998 6899999999999999997654
No 401
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=81.17 E-value=0.95 Score=47.85 Aligned_cols=37 Identities=22% Similarity=0.383 Sum_probs=32.4
Q ss_pred CCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCC
Q 008128 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKG 450 (577)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G 450 (577)
++++++|.|.|.|..|..+|+.|.+.|++ |.++|+.-
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~~G~~-v~~~D~~~ 38 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLARGVT-PRVMDTRM 38 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHTTTCC-CEEEESSS
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHhCCCE-EEEEECCC
Confidence 46889999999999999999999999999 56788743
No 402
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=81.11 E-value=2 Score=42.51 Aligned_cols=35 Identities=14% Similarity=0.162 Sum_probs=30.8
Q ss_pred CCCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 411 g~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
..+++||+++|.| .|-+|..+|+.|.+.|++|+.+
T Consensus 23 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~ 58 (299)
T 3t7c_A 23 AGKVEGKVAFITGAARGQGRSHAITLAREGADIIAI 58 (299)
T ss_dssp CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 4578999999999 5889999999999999997654
No 403
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=81.07 E-value=1.6 Score=42.40 Aligned_cols=34 Identities=24% Similarity=0.406 Sum_probs=30.0
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
+++||+++|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 39 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLS 39 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 47899999998 69999999999999999977654
No 404
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=81.05 E-value=2.7 Score=42.43 Aligned_cols=32 Identities=25% Similarity=0.304 Sum_probs=28.9
Q ss_pred CCceEEEEecchHHHHHHHHHHHC--CCeEEEEE
Q 008128 415 KGLRCVVSGSGKIAMHVLEKLIAY--GAIPVSVS 446 (577)
Q Consensus 415 ~GkrVaIQGfGNVG~~aA~~L~e~--GAkVVaIS 446 (577)
.|.+|+|.|.|.||..+++.+... |++|+++.
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~ 203 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGIS 203 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEe
Confidence 899999999999999999999999 99976653
No 405
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=80.99 E-value=1.4 Score=42.43 Aligned_cols=36 Identities=17% Similarity=0.246 Sum_probs=30.5
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+. .|.
T Consensus 2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~-~~r 38 (257)
T 3imf_A 2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVI-TGR 38 (257)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EeC
Confidence 368899999998 589999999999999999664 444
No 406
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=80.98 E-value=5.2 Score=42.45 Aligned_cols=121 Identities=12% Similarity=0.146 Sum_probs=68.2
Q ss_pred ceEEEEec-chHHHHHHHHHHHCC--CeEEEE-EcCCCeeeCCCCCCHHhHhHHHHHHhhcC--c--ccc------cccc
Q 008128 417 LRCVVSGS-GKIAMHVLEKLIAYG--AIPVSV-SDAKGYLVDEDGFDYMKISFLRDIKSQQR--S--LRD------YSKT 482 (577)
Q Consensus 417 krVaIQGf-GNVG~~aA~~L~e~G--AkVVaI-SDs~G~Iydp~GLD~e~L~~l~~~k~~~g--~--l~~------y~~~ 482 (577)
++|+|.|+ |.||+.+++.+.+.. .+++++ ++. +++.+ .+...+.+ . +.+ +.+.
T Consensus 5 ~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~----------ni~~l---~~~~~~f~~~~v~v~d~~~~~~l~~~ 71 (388)
T 1r0k_A 5 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR----------NVKDL---ADAAKRTNAKRAVIADPSLYNDLKEA 71 (388)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS----------CHHHH---HHHHHHTTCSEEEESCGGGHHHHHHH
T ss_pred eEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCC----------CHHHH---HHHHHHcCCcEEEEcChHHHHHHHHH
Confidence 78999999 999999999998753 788888 554 33333 11111111 0 000 0000
Q ss_pred cC--CceEeCCC----CccccccceeecCCcccccchhhHhhhhccCceEEEecCCCCCCHHHH----HHHHhCCcEEec
Q 008128 483 YA--RSKYYDEA----KPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV----DVLKKANVLIAP 552 (577)
Q Consensus 483 ~p--~a~~i~~~----eil~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN~p~T~eA~----~iL~~rGI~viP 552 (577)
.+ +.+.+.+. ++...++|+++.|..+ ..-.+.+-.-++.|-.++. ||=.+...+- +.-+++|+.++|
T Consensus 72 l~~~~~~v~~g~~~~~el~~~~iDvVV~ai~G-~aGl~ptlaAi~aGK~Vvl--ANKE~lv~~G~~l~~~A~~~gv~liP 148 (388)
T 1r0k_A 72 LAGSSVEAAAGADALVEAAMMGADWTMAAIIG-CAGLKATLAAIRKGKTVAL--ANKESLVSAGGLMIDAVREHGTTLLP 148 (388)
T ss_dssp TTTCSSEEEESHHHHHHHHTSCCSEEEECCCS-GGGHHHHHHHHHTTSEEEE--CCSHHHHTTHHHHHHHHHHHTCEEEE
T ss_pred hccCCcEEEeCccHHHHHHcCCCCEEEEeCCC-HHHHHHHHHHHHCCCEEEE--eCcHHHHhhHHHHHHHHHHcCCEEEE
Confidence 01 01112111 2333358999998654 3344444444566877776 6766433332 444677999999
Q ss_pred c
Q 008128 553 A 553 (577)
Q Consensus 553 D 553 (577)
-
T Consensus 149 V 149 (388)
T 1r0k_A 149 V 149 (388)
T ss_dssp C
T ss_pred e
Confidence 7
No 407
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=80.96 E-value=1.5 Score=42.70 Aligned_cols=34 Identities=29% Similarity=0.426 Sum_probs=29.7
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~ 60 (281)
T 3ppi_A 26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIA 60 (281)
T ss_dssp GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 468899999998 5899999999999999997654
No 408
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=80.95 E-value=1.5 Score=42.37 Aligned_cols=33 Identities=36% Similarity=0.385 Sum_probs=29.4
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
+++|++|+|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~ 59 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLT 59 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 57899999998 5999999999999999997654
No 409
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=80.92 E-value=1.6 Score=42.16 Aligned_cols=35 Identities=23% Similarity=0.285 Sum_probs=30.2
Q ss_pred CCCCCceEEEEec---chHHHHHHHHHHHCCCeEEEEE
Q 008128 412 KELKGLRCVVSGS---GKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 412 ~~l~GkrVaIQGf---GNVG~~aA~~L~e~GAkVVaIS 446 (577)
.+++||+++|.|. |.+|.++|+.|.+.|++|+.+.
T Consensus 4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~ 41 (261)
T 2wyu_A 4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSY 41 (261)
T ss_dssp ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEE
T ss_pred cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEc
Confidence 3678999999995 6999999999999999976543
No 410
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=80.70 E-value=1.8 Score=44.70 Aligned_cols=35 Identities=23% Similarity=0.350 Sum_probs=30.7
Q ss_pred CCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
++++++|+|.|.|.+|..+++.+...|++ |.+.|.
T Consensus 164 ~l~~~~VlViGaGgvG~~aa~~a~~~Ga~-V~v~dr 198 (361)
T 1pjc_A 164 GVKPGKVVILGGGVVGTEAAKMAVGLGAQ-VQIFDI 198 (361)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEeC
Confidence 36779999999999999999999999997 556665
No 411
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=80.69 E-value=1.6 Score=42.65 Aligned_cols=34 Identities=21% Similarity=0.218 Sum_probs=29.1
Q ss_pred CCCCceEEEEec-ch--HHHHHHHHHHHCCCeEEEEE
Q 008128 413 ELKGLRCVVSGS-GK--IAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 413 ~l~GkrVaIQGf-GN--VG~~aA~~L~e~GAkVVaIS 446 (577)
+++||+++|.|. |+ +|.++|+.|.+.|++|+.+.
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~ 59 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTY 59 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEee
Confidence 588999999994 66 99999999999999966543
No 412
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=80.67 E-value=1.7 Score=42.30 Aligned_cols=34 Identities=24% Similarity=0.242 Sum_probs=29.6
Q ss_pred CCCCceEEEEec---chHHHHHHHHHHHCCCeEEEEE
Q 008128 413 ELKGLRCVVSGS---GKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 413 ~l~GkrVaIQGf---GNVG~~aA~~L~e~GAkVVaIS 446 (577)
+++||+++|.|. |-+|.++|+.|.+.|++|+.+.
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~ 39 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTY 39 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEe
Confidence 478999999995 7999999999999999976553
No 413
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=80.67 E-value=1.8 Score=39.70 Aligned_cols=31 Identities=16% Similarity=0.318 Sum_probs=27.2
Q ss_pred ceEEEEe-cchHHHHHHHHHHHCCCeEEEEEc
Q 008128 417 LRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 417 krVaIQG-fGNVG~~aA~~L~e~GAkVVaISD 447 (577)
++|+|.| .|.+|+++++.|.+.|.+|++++-
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R 32 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVR 32 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEc
Confidence 4799999 699999999999999999877654
No 414
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=80.66 E-value=2 Score=41.79 Aligned_cols=34 Identities=32% Similarity=0.441 Sum_probs=30.0
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~ 51 (273)
T 1ae1_A 17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTC 51 (273)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEE
Confidence 468899999998 6899999999999999997654
No 415
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=80.59 E-value=2.1 Score=41.67 Aligned_cols=36 Identities=19% Similarity=0.220 Sum_probs=31.0
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+. .|.
T Consensus 7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~-~~r 43 (277)
T 3tsc_A 7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIA-VDI 43 (277)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEE-EEC
T ss_pred cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEE-Eec
Confidence 468999999998 588999999999999999765 444
No 416
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=80.57 E-value=1.9 Score=42.17 Aligned_cols=35 Identities=26% Similarity=0.401 Sum_probs=30.3
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
..++|++|+|.| .|-+|+++|+.|.+.|++|+.+.
T Consensus 14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~ 49 (303)
T 1yxm_A 14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIAS 49 (303)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 368899999998 69999999999999999976553
No 417
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=80.55 E-value=2 Score=42.05 Aligned_cols=33 Identities=15% Similarity=0.188 Sum_probs=29.2
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
+++||+++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 52 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVC 52 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 47899999998 6899999999999999997654
No 418
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=80.48 E-value=1.5 Score=42.44 Aligned_cols=36 Identities=22% Similarity=0.245 Sum_probs=30.7
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+ |.
T Consensus 6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~-~r 42 (262)
T 3pk0_A 6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVA-GR 42 (262)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE-ES
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE-eC
Confidence 368999999998 6899999999999999997654 44
No 419
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=80.46 E-value=2.8 Score=42.54 Aligned_cols=35 Identities=17% Similarity=0.208 Sum_probs=31.8
Q ss_pred CCCceEEEEec-chHHHHHHHHHHHCCCeEEEEEcC
Q 008128 414 LKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 414 l~GkrVaIQGf-GNVG~~aA~~L~e~GAkVVaISDs 448 (577)
-.|.+|+|.|. |.||..+++.+...|+++|+++++
T Consensus 166 ~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~ 201 (357)
T 1zsy_A 166 QPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRD 201 (357)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECC
T ss_pred CCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecC
Confidence 36899999997 999999999999999999998876
No 420
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=80.43 E-value=1.6 Score=41.91 Aligned_cols=35 Identities=23% Similarity=0.417 Sum_probs=30.4
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
.++++++|+|.| .|-+|+++++.|.+.|++|+.+.
T Consensus 10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~ 45 (266)
T 1xq1_A 10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCA 45 (266)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 468899999998 69999999999999999976653
No 421
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=80.42 E-value=2 Score=42.73 Aligned_cols=33 Identities=24% Similarity=0.316 Sum_probs=29.4
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
+++||+|+|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~ 61 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLS 61 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 58999999999 5889999999999999996654
No 422
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=80.39 E-value=1.5 Score=41.09 Aligned_cols=33 Identities=15% Similarity=0.318 Sum_probs=29.2
Q ss_pred CCCceEEEEe-cchHHHHHHHHHHHCCC--eEEEEE
Q 008128 414 LKGLRCVVSG-SGKIAMHVLEKLIAYGA--IPVSVS 446 (577)
Q Consensus 414 l~GkrVaIQG-fGNVG~~aA~~L~e~GA--kVVaIS 446 (577)
+++++|+|.| .|.+|+++++.|.+.|+ +|+.++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~ 51 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIG 51 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEE
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEE
Confidence 5689999999 69999999999999999 877664
No 423
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=80.38 E-value=1.6 Score=42.72 Aligned_cols=36 Identities=25% Similarity=0.350 Sum_probs=30.9
Q ss_pred CCCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 411 g~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
..+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 23 ~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~ 59 (270)
T 3ftp_A 23 DKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTA 59 (270)
T ss_dssp CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 4578999999998 58999999999999999976543
No 424
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=80.35 E-value=2.2 Score=41.57 Aligned_cols=34 Identities=24% Similarity=0.319 Sum_probs=30.0
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.+++||+++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 39 (270)
T 1yde_A 5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVIC 39 (270)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 468899999998 6899999999999999997654
No 425
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=80.32 E-value=1.3 Score=41.69 Aligned_cols=34 Identities=21% Similarity=0.127 Sum_probs=28.1
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~ 37 (223)
T 3uce_A 3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVAS 37 (223)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEec
Confidence 47899999998 58999999999999999966543
No 426
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=80.29 E-value=1.5 Score=41.78 Aligned_cols=34 Identities=32% Similarity=0.267 Sum_probs=29.7
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~ 35 (246)
T 2uvd_A 1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNY 35 (246)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 46789999998 69999999999999999977654
No 427
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=80.28 E-value=1.8 Score=43.08 Aligned_cols=36 Identities=22% Similarity=0.432 Sum_probs=28.9
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEc
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISD 447 (577)
..+++++|+|.| .|.+|+++++.|.+.|++|+++.-
T Consensus 17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r 53 (333)
T 2q1w_A 17 RGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDN 53 (333)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEEC
Confidence 356789999998 699999999999999999887753
No 428
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=80.26 E-value=2 Score=42.53 Aligned_cols=36 Identities=19% Similarity=0.249 Sum_probs=30.6
Q ss_pred CCCCCceEEEEecc---hHHHHHHHHHHHCCCeEEEEEcC
Q 008128 412 KELKGLRCVVSGSG---KIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 412 ~~l~GkrVaIQGfG---NVG~~aA~~L~e~GAkVVaISDs 448 (577)
.+++||+++|.|.+ -+|.++|+.|.+.|++|+ +.|.
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~-~~~r 64 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVA-LTYL 64 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEE-EEES
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEE-EEeC
Confidence 46899999999974 899999999999999965 4454
No 429
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=80.19 E-value=1.6 Score=41.41 Aligned_cols=35 Identities=20% Similarity=0.282 Sum_probs=30.8
Q ss_pred CCCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 411 g~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
..++++++|+|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~ 44 (249)
T 3f9i_A 9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIIS 44 (249)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 4578999999998 6899999999999999997654
No 430
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=80.01 E-value=1.7 Score=41.47 Aligned_cols=33 Identities=15% Similarity=0.182 Sum_probs=29.2
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
+++||+++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 36 (246)
T 2ag5_A 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIAT 36 (246)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 47899999998 5999999999999999997654
No 431
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=79.97 E-value=1.4 Score=46.03 Aligned_cols=36 Identities=25% Similarity=0.468 Sum_probs=32.8
Q ss_pred CCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCC
Q 008128 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAK 449 (577)
Q Consensus 414 l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~ 449 (577)
|++++|+|.|.|-+|..+|+.|...|..-++|.|.+
T Consensus 32 L~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 32 IKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 678999999999999999999999998778888864
No 432
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=79.94 E-value=1.9 Score=41.86 Aligned_cols=37 Identities=27% Similarity=0.213 Sum_probs=31.6
Q ss_pred CCCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEc
Q 008128 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 411 g~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISD 447 (577)
..+++||+++|.| .|-+|.++|+.|.+.|++|+.+..
T Consensus 13 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~ 50 (270)
T 3is3_A 13 PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYA 50 (270)
T ss_dssp TTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 3578999999998 589999999999999999776543
No 433
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=79.94 E-value=1.4 Score=42.11 Aligned_cols=34 Identities=21% Similarity=0.216 Sum_probs=29.9
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
+++|++|+|.| .|.+|+++++.|.+.|++|+.+.
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~ 38 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNY 38 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEc
Confidence 57899999998 69999999999999999977654
No 434
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=79.86 E-value=1.7 Score=42.01 Aligned_cols=36 Identities=22% Similarity=0.270 Sum_probs=30.9
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+. .|.
T Consensus 8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r 44 (256)
T 3gaf_A 8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVV-TDL 44 (256)
T ss_dssp TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEE-EES
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EeC
Confidence 578999999998 589999999999999999654 444
No 435
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=79.77 E-value=1.3 Score=43.17 Aligned_cols=35 Identities=17% Similarity=0.310 Sum_probs=27.5
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~ 58 (260)
T 3gem_A 23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISY 58 (260)
T ss_dssp ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 468899999998 58999999999999999976543
No 436
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=79.73 E-value=13 Score=39.65 Aligned_cols=33 Identities=21% Similarity=0.192 Sum_probs=27.3
Q ss_pred CCceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 415 ~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
.|.+..|.|.|.||..+|..|.+.|..|+ +.|.
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G~~V~-~~D~ 42 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHGVDVL-GVDI 42 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEE-EECS
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCCCEEE-EEEC
Confidence 46789999999999999999999999965 4464
No 437
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=79.69 E-value=2 Score=42.22 Aligned_cols=36 Identities=28% Similarity=0.384 Sum_probs=30.4
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEc
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISD 447 (577)
.+++||+++|.| .|.+|.++|+.|.+.|++|+.++-
T Consensus 5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r 41 (285)
T 3sc4_A 5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAK 41 (285)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEES
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 468999999998 588999999999999999765543
No 438
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=79.69 E-value=2.4 Score=41.89 Aligned_cols=34 Identities=24% Similarity=0.308 Sum_probs=29.5
Q ss_pred CCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 414 LKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 414 l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
++||+++|.| .+-.|..+|+.|.+.|++|+ +.|.
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv-~~~~ 43 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVV-ALGL 43 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 5899999998 57899999999999999955 5665
No 439
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=79.64 E-value=2.1 Score=41.23 Aligned_cols=33 Identities=27% Similarity=0.305 Sum_probs=29.0
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.++|++++|.| .|.+|.++++.|.+.|++|+.+
T Consensus 4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 37 (267)
T 2gdz_A 4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALV 37 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEE
Confidence 36789999998 6999999999999999997654
No 440
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=79.63 E-value=1.6 Score=41.87 Aligned_cols=35 Identities=23% Similarity=0.407 Sum_probs=26.7
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~ 40 (257)
T 3tl3_A 5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLD 40 (257)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEE
T ss_pred ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 468899999998 58999999999999999976553
No 441
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=79.62 E-value=2 Score=42.03 Aligned_cols=34 Identities=18% Similarity=0.300 Sum_probs=29.7
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
..++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~ 57 (277)
T 4fc7_A 23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIA 57 (277)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEE
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence 358999999998 5789999999999999997654
No 442
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=79.60 E-value=1.1 Score=45.76 Aligned_cols=34 Identities=18% Similarity=0.153 Sum_probs=29.2
Q ss_pred CCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 414 l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
+++++|.|.|+|++|..+|..|.+.|.+|+ +.|.
T Consensus 14 l~~~~I~IIG~G~mG~alA~~L~~~G~~V~-~~~~ 47 (338)
T 1np3_A 14 IQGKKVAIIGYGSQGHAHACNLKDSGVDVT-VGLR 47 (338)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHHTTCCEE-EECC
T ss_pred hcCCEEEEECchHHHHHHHHHHHHCcCEEE-EEEC
Confidence 567899999999999999999999998854 5554
No 443
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=79.58 E-value=2.3 Score=42.39 Aligned_cols=35 Identities=23% Similarity=0.252 Sum_probs=30.5
Q ss_pred CCCCCceEEEEec---chHHHHHHHHHHHCCCeEEEEE
Q 008128 412 KELKGLRCVVSGS---GKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 412 ~~l~GkrVaIQGf---GNVG~~aA~~L~e~GAkVVaIS 446 (577)
.+++||+++|.|. +-+|..+|+.|.+.|++|+.+.
T Consensus 5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~ 42 (319)
T 2ptg_A 5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGT 42 (319)
T ss_dssp CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEe
Confidence 4688999999994 8999999999999999976553
No 444
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=79.54 E-value=1.6 Score=42.35 Aligned_cols=35 Identities=29% Similarity=0.398 Sum_probs=30.1
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
+++||+++|.| .|-+|.++|+.|.+.|++|+. .|.
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~-~~r 52 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGARLVL-SGR 52 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EeC
Confidence 58899999998 589999999999999999664 444
No 445
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=79.54 E-value=6.9 Score=34.94 Aligned_cols=31 Identities=23% Similarity=0.236 Sum_probs=26.7
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
.+|+|+|.|.+|..+|..|.+.|.+|+ +.|.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~-lie~ 32 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVL-VLDG 32 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEE-EEEC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEE-EEeC
Confidence 379999999999999999999999954 5554
No 446
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=79.43 E-value=1.5 Score=42.47 Aligned_cols=35 Identities=17% Similarity=0.212 Sum_probs=28.8
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEc
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISD 447 (577)
++++|+++|.| .|-+|.++|+.|.+.|++|+.+.-
T Consensus 2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r 37 (281)
T 3m1a_A 2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTAR 37 (281)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 35789999998 599999999999999999776543
No 447
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=79.41 E-value=1.6 Score=42.76 Aligned_cols=36 Identities=28% Similarity=0.331 Sum_probs=30.6
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
.+++||+++|.| .|-+|..+|+.|.+.|++|+. .|.
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~-~~r 65 (275)
T 4imr_A 29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVIL-HGV 65 (275)
T ss_dssp HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EcC
Confidence 368999999998 589999999999999999664 444
No 448
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=79.40 E-value=1.8 Score=41.56 Aligned_cols=37 Identities=16% Similarity=0.109 Sum_probs=29.6
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
.++.+|+++|.| .|-+|.++|+.|.+.|++|+.+...
T Consensus 3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCC
Confidence 356789999998 5889999999999999998876554
No 449
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=79.40 E-value=1.8 Score=41.64 Aligned_cols=33 Identities=30% Similarity=0.391 Sum_probs=29.0
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 35 (260)
T 2qq5_A 2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYIT 35 (260)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence 47899999998 6899999999999999997654
No 450
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=79.40 E-value=5.5 Score=40.03 Aligned_cols=107 Identities=14% Similarity=0.179 Sum_probs=56.3
Q ss_pred CCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccC-CceEeC
Q 008128 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYA-RSKYYD 490 (577)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p-~a~~i~ 490 (577)
.+...++|+|.|.|++|..+|..|.+.|..|+.+ . +.+.++ .+++..-.+..-...++ .....+
T Consensus 15 ~~~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~--~----------~~~~~~---~i~~~g~~~~~~~~~~~~~~~~~~ 79 (318)
T 3hwr_A 15 LYFQGMKVAIMGAGAVGCYYGGMLARAGHEVILI--A----------RPQHVQ---AIEATGLRLETQSFDEQVKVSASS 79 (318)
T ss_dssp -----CEEEEESCSHHHHHHHHHHHHTTCEEEEE--C----------CHHHHH---HHHHHCEEEECSSCEEEECCEEES
T ss_pred hhccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE--E----------cHhHHH---HHHhCCeEEEcCCCcEEEeeeeeC
Confidence 4566789999999999999999999999986654 3 112322 22222111110000000 111112
Q ss_pred CCCccccccceeecCCcccccchhhHhhhh---ccCceEEEecCCCCCC
Q 008128 491 EAKPWNERCDVAFPCASQNEIDQSDAINLV---NSGCRILVEGSNMPCT 536 (577)
Q Consensus 491 ~~eil~~~cDIlIPcA~~n~It~enA~~l~---~~~akiVvEgAN~p~T 536 (577)
+.+. ..+||++|-|.....+ .+.++.|. ..+ .+|+--.|+--.
T Consensus 80 ~~~~-~~~~D~vilavk~~~~-~~~l~~l~~~l~~~-~~iv~~~nGi~~ 125 (318)
T 3hwr_A 80 DPSA-VQGADLVLFCVKSTDT-QSAALAMKPALAKS-ALVLSLQNGVEN 125 (318)
T ss_dssp CGGG-GTTCSEEEECCCGGGH-HHHHHHHTTTSCTT-CEEEEECSSSSH
T ss_pred CHHH-cCCCCEEEEEcccccH-HHHHHHHHHhcCCC-CEEEEeCCCCCc
Confidence 2111 2479999998876644 44444442 223 366667887644
No 451
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=79.32 E-value=2.3 Score=41.31 Aligned_cols=33 Identities=30% Similarity=0.393 Sum_probs=29.2
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~ 36 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAV 36 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 47899999998 5899999999999999997654
No 452
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=79.23 E-value=2.9 Score=41.95 Aligned_cols=33 Identities=24% Similarity=0.264 Sum_probs=29.7
Q ss_pred CCCceEEEEecchHHHHHHHHHHHCCCeEEEEE
Q 008128 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 414 l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaIS 446 (577)
-.|.+|+|.|.|.||..+++.+...|++|+++.
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~ 197 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGLRVAAVD 197 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEe
Confidence 468999999999999999999999999987764
No 453
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=79.21 E-value=1.8 Score=41.41 Aligned_cols=36 Identities=17% Similarity=0.247 Sum_probs=31.2
Q ss_pred CCCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 411 g~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
..+++||+++|.| .|.+|.++++.|.+.|++|+.+.
T Consensus 10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 46 (247)
T 1uzm_A 10 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTH 46 (247)
T ss_dssp CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 3568899999998 69999999999999999977654
No 454
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=79.20 E-value=2.1 Score=43.29 Aligned_cols=31 Identities=19% Similarity=0.318 Sum_probs=28.6
Q ss_pred CCceEEEEecchHHHHHHHHHHHCCC-eEEEE
Q 008128 415 KGLRCVVSGSGKIAMHVLEKLIAYGA-IPVSV 445 (577)
Q Consensus 415 ~GkrVaIQGfGNVG~~aA~~L~e~GA-kVVaI 445 (577)
.|.+|+|.|.|.||..+++.+...|+ +|+++
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~ 198 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVS 198 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 89999999999999999999999999 87665
No 455
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=79.18 E-value=2.1 Score=42.13 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=29.4
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~ 55 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLN 55 (281)
T ss_dssp -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 468899999998 5899999999999999997644
No 456
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=79.17 E-value=2.1 Score=42.39 Aligned_cols=31 Identities=16% Similarity=0.159 Sum_probs=27.4
Q ss_pred ceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 417 krVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
++|+|.|.|++|..+|..|.+.|..| .+.|.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V-~l~d~ 35 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAV-TAYDI 35 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEE-EEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeE-EEEeC
Confidence 68999999999999999999999985 45665
No 457
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=79.17 E-value=3.6 Score=41.18 Aligned_cols=37 Identities=22% Similarity=0.395 Sum_probs=32.0
Q ss_pred CCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
.-..|.+|+|.|.|.||..++..+...|++++.++|.
T Consensus 157 ~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~ 193 (346)
T 4a2c_A 157 QGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDI 193 (346)
T ss_dssp TCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEES
T ss_pred ccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEec
Confidence 3457899999999999999999999999987767765
No 458
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=79.11 E-value=2.1 Score=42.67 Aligned_cols=35 Identities=20% Similarity=0.241 Sum_probs=30.6
Q ss_pred CCCCCceEEEEec---chHHHHHHHHHHHCCCeEEEEE
Q 008128 412 KELKGLRCVVSGS---GKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 412 ~~l~GkrVaIQGf---GNVG~~aA~~L~e~GAkVVaIS 446 (577)
.+++||+++|.|. |-+|..+|+.|.+.|++|+.+.
T Consensus 5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~ 42 (315)
T 2o2s_A 5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGT 42 (315)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEE
T ss_pred ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEe
Confidence 4689999999995 8999999999999999976553
No 459
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=79.10 E-value=1.6 Score=43.32 Aligned_cols=36 Identities=25% Similarity=0.313 Sum_probs=30.9
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
.+|+||+++|.| .+-+|..+|+.|.+.|++|+ +.|.
T Consensus 5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vv-i~~r 41 (247)
T 4hp8_A 5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVV-CAAR 41 (247)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEE-EEeC
Confidence 379999999998 57899999999999999964 5665
No 460
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=79.08 E-value=2.2 Score=42.24 Aligned_cols=36 Identities=22% Similarity=0.179 Sum_probs=30.2
Q ss_pred CCCCCceEEEEec-ch--HHHHHHHHHHHCCCeEEEEEcC
Q 008128 412 KELKGLRCVVSGS-GK--IAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 412 ~~l~GkrVaIQGf-GN--VG~~aA~~L~e~GAkVVaISDs 448 (577)
.+++||+++|.|. |. +|..+|+.|.+.|++|+. .+.
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~-~~r 65 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAF-TYQ 65 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEE-EEC
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEE-EcC
Confidence 3689999999996 56 999999999999999654 444
No 461
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=79.07 E-value=2.1 Score=41.98 Aligned_cols=35 Identities=26% Similarity=0.300 Sum_probs=30.2
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
+++||+++|.| .|.+|.++|+.|.+.|++|+. .|.
T Consensus 26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~-~~r 61 (276)
T 2b4q_A 26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFI-CAR 61 (276)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-ECS
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEE-EeC
Confidence 58899999998 589999999999999999664 444
No 462
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=79.06 E-value=1.2 Score=45.80 Aligned_cols=32 Identities=19% Similarity=0.151 Sum_probs=27.6
Q ss_pred CceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
-.+|+|.|.|-+|...|..+...|.. |.+.|.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~-V~l~D~ 37 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFR-VKLYDI 37 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCC-EEEECS
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCe-EEEEEC
Confidence 45899999999999999999999999 456665
No 463
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=79.03 E-value=1.7 Score=43.19 Aligned_cols=36 Identities=17% Similarity=0.158 Sum_probs=31.0
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+ |.
T Consensus 37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~-~r 73 (293)
T 3rih_A 37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVA-AR 73 (293)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE-ES
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-EC
Confidence 578999999998 5899999999999999997654 44
No 464
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=78.99 E-value=2.3 Score=42.12 Aligned_cols=34 Identities=29% Similarity=0.246 Sum_probs=30.0
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.+++||+++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 30 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~ 64 (291)
T 3cxt_A 30 FSLKGKIALVTGASYGIGFAIASAYAKAGATIVFN 64 (291)
T ss_dssp GCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 368899999998 6999999999999999997654
No 465
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=78.99 E-value=1.8 Score=40.93 Aligned_cols=33 Identities=18% Similarity=0.345 Sum_probs=28.2
Q ss_pred CCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 414 LKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 414 l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
++||+++|.| .|-+|+++|+.|.+.|++|+.++
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~ 34 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNID 34 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 3678999998 68999999999999999977654
No 466
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=78.85 E-value=0.91 Score=48.73 Aligned_cols=32 Identities=16% Similarity=0.377 Sum_probs=27.9
Q ss_pred CceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
.++|+|.|+|.||+++|+.|.+.|..| .|.|.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v-~vId~ 34 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDI-TIVDK 34 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEE-EEEES
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCE-EEEEC
Confidence 578999999999999999999999885 46665
No 467
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=78.84 E-value=1.6 Score=42.96 Aligned_cols=34 Identities=24% Similarity=0.395 Sum_probs=28.7
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~ 59 (277)
T 3gvc_A 25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCA 59 (277)
T ss_dssp --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 468999999998 6899999999999999997654
No 468
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=78.84 E-value=2.4 Score=41.87 Aligned_cols=32 Identities=19% Similarity=0.211 Sum_probs=28.8
Q ss_pred CceEEEEe-cchHHHHHHHHHHHCCCeEEEEEc
Q 008128 416 GLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 416 GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISD 447 (577)
+++|.|.| .|-+|+++++.|.+.|++|+++..
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r 41 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVR 41 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEc
Confidence 78999999 799999999999999999887654
No 469
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=78.78 E-value=1.6 Score=41.92 Aligned_cols=35 Identities=29% Similarity=0.447 Sum_probs=30.0
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
+++||+++|.| .|.+|+++|+.|.+.|++|+. .|.
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~-~~r 38 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAF-SDI 38 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE-ECS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EeC
Confidence 57899999998 589999999999999999654 444
No 470
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=78.75 E-value=2 Score=41.94 Aligned_cols=31 Identities=19% Similarity=0.297 Sum_probs=27.9
Q ss_pred CceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 416 GLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 416 GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
||+|.|.| .|.+|+++++.|.+.|++|+++.
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~ 32 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTI 32 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEE
Confidence 68999999 69999999999999999987664
No 471
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=78.72 E-value=3.6 Score=41.53 Aligned_cols=50 Identities=14% Similarity=0.098 Sum_probs=35.4
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHH
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRD 468 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~ 468 (577)
++++|+++|.| .|-+|.++|+.|.+.|++|++.+- +..+.+.+++..+.+
T Consensus 2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r------~~~~r~~~~~~~l~~ 52 (324)
T 3u9l_A 2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMR------DIVGRNASNVEAIAG 52 (324)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES------CTTTTTHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecC------cccccCHHHHHHHHH
Confidence 46789999998 599999999999999999876543 344555555544443
No 472
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=78.71 E-value=2.2 Score=39.32 Aligned_cols=31 Identities=16% Similarity=0.289 Sum_probs=27.1
Q ss_pred ceEEEEec-chHHHHHHHHHHHCCCeEEEEEc
Q 008128 417 LRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 417 krVaIQGf-GNVG~~aA~~L~e~GAkVVaISD 447 (577)
++|+|.|. |.+|+++++.|.+.|.+|++++-
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R 32 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVR 32 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEe
Confidence 47899995 99999999999999999877653
No 473
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=78.48 E-value=4.8 Score=41.26 Aligned_cols=32 Identities=25% Similarity=0.264 Sum_probs=28.8
Q ss_pred CCceEEEEecchHHHHHHHHHHHCCCeEEEEE
Q 008128 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 415 ~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaIS 446 (577)
.|.+|+|.|.|.||..+++.+...|++|+++.
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~ 225 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFT 225 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEe
Confidence 58899999999999999999999999976654
No 474
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=78.43 E-value=6 Score=40.72 Aligned_cols=35 Identities=11% Similarity=0.266 Sum_probs=28.2
Q ss_pred CCCceEEEEecchHHHHHHHHHHHCCC-eEEEEEcC
Q 008128 414 LKGLRCVVSGSGKIAMHVLEKLIAYGA-IPVSVSDA 448 (577)
Q Consensus 414 l~GkrVaIQGfGNVG~~aA~~L~e~GA-kVVaISDs 448 (577)
-.+++|+|.|.|+||+.+|..|...|. .-+.+.|.
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~ 42 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 356799999999999999999988775 23566665
No 475
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=78.43 E-value=2 Score=42.00 Aligned_cols=34 Identities=24% Similarity=0.275 Sum_probs=29.6
Q ss_pred CCCCceEEEEec---chHHHHHHHHHHHCCCeEEEEE
Q 008128 413 ELKGLRCVVSGS---GKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 413 ~l~GkrVaIQGf---GNVG~~aA~~L~e~GAkVVaIS 446 (577)
+++||+++|.|. |-+|.++|+.|.+.|++|+.+.
T Consensus 18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~ 54 (285)
T 2p91_A 18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTY 54 (285)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEe
Confidence 378999999996 6899999999999999976553
No 476
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=78.40 E-value=2 Score=41.38 Aligned_cols=34 Identities=26% Similarity=0.208 Sum_probs=29.4
Q ss_pred CCCCceEEEEec---chHHHHHHHHHHHCCCeEEEEE
Q 008128 413 ELKGLRCVVSGS---GKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 413 ~l~GkrVaIQGf---GNVG~~aA~~L~e~GAkVVaIS 446 (577)
+++||+++|.|. |-+|.++|+.|.+.|++|+.+.
T Consensus 6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~ 42 (265)
T 1qsg_A 6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTY 42 (265)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEc
Confidence 378999999995 6999999999999999976543
No 477
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=78.37 E-value=3.8 Score=40.95 Aligned_cols=33 Identities=21% Similarity=0.248 Sum_probs=29.7
Q ss_pred CCCceEEEEec-chHHHHHHHHHHHCCCeEEEEE
Q 008128 414 LKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 414 l~GkrVaIQGf-GNVG~~aA~~L~e~GAkVVaIS 446 (577)
-.|++|+|.|. |.+|..+++.+...|++|+++.
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~ 181 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIA 181 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 46899999998 9999999999999999987765
No 478
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=78.32 E-value=2.1 Score=41.64 Aligned_cols=31 Identities=32% Similarity=0.355 Sum_probs=27.9
Q ss_pred ceEEEEec-chHHHHHHHHHHHCCCeEEEEEc
Q 008128 417 LRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 417 krVaIQGf-GNVG~~aA~~L~e~GAkVVaISD 447 (577)
+||.|.|. |-||+++++.|.+.|..|++++-
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 57999995 99999999999999999988863
No 479
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=78.29 E-value=4.2 Score=41.03 Aligned_cols=32 Identities=19% Similarity=0.340 Sum_probs=28.9
Q ss_pred CCceEEEE-ecchHHHHHHHHHHHCCCeEEEEE
Q 008128 415 KGLRCVVS-GSGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 415 ~GkrVaIQ-GfGNVG~~aA~~L~e~GAkVVaIS 446 (577)
.|.+|+|. |.|.||..+++.+...|++|+++.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~ 182 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTA 182 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEe
Confidence 68999999 699999999999999999987764
No 480
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=78.27 E-value=2.2 Score=42.36 Aligned_cols=35 Identities=26% Similarity=0.413 Sum_probs=28.8
Q ss_pred CCCCceEEEEec-chHHHHHHHHHHHCCCeEEEEEc
Q 008128 413 ELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 413 ~l~GkrVaIQGf-GNVG~~aA~~L~e~GAkVVaISD 447 (577)
.+++++|+|.|. |.+|+++++.|.+.|.+|+++.-
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 467889999995 99999999999999999887653
No 481
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=78.23 E-value=5.5 Score=40.00 Aligned_cols=109 Identities=12% Similarity=0.162 Sum_probs=61.3
Q ss_pred CceEEEEecchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCCCCcc
Q 008128 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW 495 (577)
Q Consensus 416 GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~~eil 495 (577)
.++++|.|+|.+|+.+++.|.+.|. |+ +.|. || +.+. .++ .+ +.-+ +.++ ...+.|
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~-vid~-----~~-----~~~~----~~~-~~-~~~i---~gd~---~~~~~L 170 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FV-LAED-----EN-----VRKK----VLR-SG-ANFV---HGDP---TRVSDL 170 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EE-EESC-----GG-----GHHH----HHH-TT-CEEE---ESCT---TSHHHH
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EE-EEeC-----Ch-----hhhh----HHh-CC-cEEE---EeCC---CCHHHH
Confidence 4589999999999999999999997 54 4465 33 2332 111 11 1100 0000 111122
Q ss_pred ----ccccceeecCCcccccch---hhHhhhhccCceEEEecCCCCCCHHHHHHHHhCCc--EEecc
Q 008128 496 ----NERCDVAFPCASQNEIDQ---SDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANV--LIAPA 553 (577)
Q Consensus 496 ----~~~cDIlIPcA~~n~It~---enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~rGI--~viPD 553 (577)
-.+||.++-+...++.|. ..|+++ ..+.++|+..-| ++..+.|++.|+ .+.|.
T Consensus 171 ~~a~i~~a~~vi~~~~~d~~n~~~~~~ar~~-~~~~~iiar~~~----~~~~~~l~~~G~d~vi~~~ 232 (336)
T 1lnq_A 171 EKANVRGARAVIVDLESDSETIHCILGIRKI-DESVRIIAEAER----YENIEQLRMAGADQVISPF 232 (336)
T ss_dssp HHTCSTTEEEEEECCSSHHHHHHHHHHHHTT-CTTSEEEEECSS----GGGHHHHHHTTCSEEECHH
T ss_pred HhcChhhccEEEEcCCccHHHHHHHHHHHHH-CCCCeEEEEECC----HHHHHHHHHcCCCEEEChh
Confidence 136888887765443333 333443 224688887643 345577888887 35555
No 482
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=78.22 E-value=2.1 Score=40.62 Aligned_cols=36 Identities=28% Similarity=0.314 Sum_probs=31.1
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
.++||+++|.| .|-+|.++|+.|.+.|++|+.+.+.
T Consensus 4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~ 40 (255)
T 3icc_A 4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGN 40 (255)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCC
Confidence 47899999998 5899999999999999998766554
No 483
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=78.18 E-value=6.3 Score=42.25 Aligned_cols=115 Identities=16% Similarity=0.281 Sum_probs=70.8
Q ss_pred HHHHHHHHcCCCCCCceEEEEecc----------hHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHh
Q 008128 402 FAQLILADMNKELKGLRCVVSGSG----------KIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKS 471 (577)
Q Consensus 402 ~~~~~l~~~g~~l~GkrVaIQGfG----------NVG~~aA~~L~e~GAkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~ 471 (577)
.++.+.+.++.+++|+||+|-|+- .-+..+++.|.+.|++|. +|||.-. +. .+.
T Consensus 308 ~~~~i~~~l~~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~--------~~DP~~~--~~------~~~ 371 (446)
T 4a7p_A 308 MGRKVIKAMGGDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVK--------AYDPEGV--EQ------ASK 371 (446)
T ss_dssp HHHHHHHHTTSCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEE--------EECSSCH--HH------HGG
T ss_pred HHHHHHHHhcccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEE--------EECCCCC--Hh------HHH
Confidence 445555667888999999999974 447899999999999953 4566531 11 111
Q ss_pred hcCcccccccccCCceEeCCCCcc--ccccceeecCCcccc---cchhhHhhhhccCceEEEecCCCCCCHHHHHHHHhC
Q 008128 472 QQRSLRDYSKTYARSKYYDEAKPW--NERCDVAFPCASQNE---IDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKA 546 (577)
Q Consensus 472 ~~g~l~~y~~~~p~a~~i~~~eil--~~~cDIlIPcA~~n~---It~enA~~l~~~~akiVvEgAN~p~T~eA~~iL~~r 546 (577)
.|++.++.+ ++. -..+|+++-++--++ ++-+...++. +.++|+.+-|..- + +.+++.
T Consensus 372 ----------~~~~~~~~~--~~~~~~~~ad~vvi~t~~~~f~~~d~~~~~~~~--~~~~i~D~r~~~~-~---~~~~~~ 433 (446)
T 4a7p_A 372 ----------MLTDVEFVE--NPYAAADGADALVIVTEWDAFRALDLTRIKNSL--KSPVLVDLRNIYP-P---AELERA 433 (446)
T ss_dssp ----------GCSSCCBCS--CHHHHHTTBSEEEECSCCTTTTSCCHHHHHTTB--SSCBEECSSCCSC-H---HHHHHT
T ss_pred ----------hcCCceEec--ChhHHhcCCCEEEEeeCCHHhhcCCHHHHHHhc--CCCEEEECCCCCC-H---HHHHhc
Confidence 122322222 122 247899998876555 4444333321 5679999999753 3 234677
Q ss_pred CcEE
Q 008128 547 NVLI 550 (577)
Q Consensus 547 GI~v 550 (577)
|..|
T Consensus 434 g~~y 437 (446)
T 4a7p_A 434 GLQY 437 (446)
T ss_dssp TCBC
T ss_pred CCEE
Confidence 7654
No 484
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=78.17 E-value=1.5 Score=47.77 Aligned_cols=57 Identities=18% Similarity=0.106 Sum_probs=37.3
Q ss_pred CCCcchHHHHHHHHHHHHHc---------CCCCCCceEEEEecchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 391 RTEATGYGLVFFAQLILADM---------NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 391 r~eATG~GV~~~~~~~l~~~---------g~~l~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
++.-.+.|.+.+++.+++.. ..+++|++++|.|.|.+|..++..|.+.|++ |.|.+.
T Consensus 330 g~nTD~~G~~~~l~~~~~~~~~~~~~~~~~~~l~~k~vlV~GaGGig~aia~~L~~~G~~-V~i~~R 395 (523)
T 2o7s_A 330 GYNTDCIGSISAIEDGLRSSGDPSSVPSSSSPLASKTVVVIGAGGAGKALAYGAKEKGAK-VVIANR 395 (523)
T ss_dssp EECCHHHHHHHHHHHHC-------------------CEEEECCSHHHHHHHHHHHHHCC--CEEEES
T ss_pred EEcCCHHHHHHHHHHhhhhccccccccccccccCCCEEEEECCcHHHHHHHHHHHHCCCE-EEEEEC
Confidence 34555678888777664321 1367899999999999999999999999997 556665
No 485
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=78.09 E-value=2 Score=42.85 Aligned_cols=34 Identities=26% Similarity=0.186 Sum_probs=29.8
Q ss_pred CCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEc
Q 008128 414 LKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 414 l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISD 447 (577)
+++++|+|.| .|-+|+++++.|.+.|++|+++.-
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 41 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSL 41 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeC
Confidence 4678999999 699999999999999999877654
No 486
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=78.06 E-value=2.5 Score=40.97 Aligned_cols=35 Identities=11% Similarity=0.151 Sum_probs=28.5
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
.++++|+++|.| .|.+|..+|+.|.+.|++|+.+.
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~ 52 (253)
T 2nm0_A 17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITY 52 (253)
T ss_dssp ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 467899999998 68999999999999999976553
No 487
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=78.05 E-value=3.5 Score=42.82 Aligned_cols=92 Identities=14% Similarity=0.181 Sum_probs=55.9
Q ss_pred CceEEEEe-cchHHHHHHHHHHHCC---CeEEEEEcCCCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEeCC
Q 008128 416 GLRCVVSG-SGKIAMHVLEKLIAYG---AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (577)
Q Consensus 416 GkrVaIQG-fGNVG~~aA~~L~e~G---AkVVaISDs~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i~~ 491 (577)
|.+|+|.| .|.||+-+.+.|.+.. ..++.++.. ...|-.+. + ++ .++ ..+..+.
T Consensus 1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~-----~~aG~~~~-~---------~~--~~~-----~~~~~~~ 58 (344)
T 3tz6_A 1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASA-----RSQGRKLA-F---------RG--QEI-----EVEDAET 58 (344)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECT-----TTSSCEEE-E---------TT--EEE-----EEEETTT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECc-----ccCCCcee-e---------cC--Cce-----EEEeCCH
Confidence 56899999 7999999999998863 355555543 12221110 0 00 000 0111121
Q ss_pred CCccccccceeecCCcccccchhhHhhhhccCceEEEecCC
Q 008128 492 AKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (577)
Q Consensus 492 ~eil~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (577)
+.| .+|||++-|+. ...+.+.++.+++.+|++|-=.+.
T Consensus 59 -~~~-~~~Dvvf~a~~-~~~s~~~a~~~~~~G~~vID~Sa~ 96 (344)
T 3tz6_A 59 -ADP-SGLDIALFSAG-SAMSKVQAPRFAAAGVTVIDNSSA 96 (344)
T ss_dssp -SCC-TTCSEEEECSC-HHHHHHHHHHHHHTTCEEEECSST
T ss_pred -HHh-ccCCEEEECCC-hHHHHHHHHHHHhCCCEEEECCCc
Confidence 122 47899998864 556778888888888887776654
No 488
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=78.04 E-value=3.9 Score=41.81 Aligned_cols=33 Identities=24% Similarity=0.415 Sum_probs=29.7
Q ss_pred CCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 414 LKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 414 l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
-.|.+|+|.| .|.||..+++.+...|++|+++.
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~ 215 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC 215 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe
Confidence 4689999999 79999999999999999988765
No 489
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=77.98 E-value=2.3 Score=44.63 Aligned_cols=90 Identities=19% Similarity=0.207 Sum_probs=54.0
Q ss_pred CceEEEEe-cchHHHHHHHHHHHCCC---eEEEEEcC--CCeeeCCCCCCHHhHhHHHHHHhhcCcccccccccCCceEe
Q 008128 416 GLRCVVSG-SGKIAMHVLEKLIAYGA---IPVSVSDA--KGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (577)
Q Consensus 416 GkrVaIQG-fGNVG~~aA~~L~e~GA---kVVaISDs--~G~Iydp~GLD~e~L~~l~~~k~~~g~l~~y~~~~p~a~~i 489 (577)
..+|+|.| .|.||+.+.+.|.+.+. .++.++.. .|--+.-.| .+. ..+..
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~~-------------------~~~-----~~~~~ 57 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKD-------------------QDI-----TIEET 57 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEETT-------------------EEE-----EEEEC
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceecC-------------------CCc-----eEeeC
Confidence 35899999 79999999999998643 44444432 222111000 000 01111
Q ss_pred CCCCccccccceeecCCcccccchhhHhhhhccCceEEEecCC
Q 008128 490 DEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (577)
Q Consensus 490 ~~~eil~~~cDIlIPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (577)
+.+ .+ .+|||++-|+ ....+.+.++.+++.+|++|-=.|.
T Consensus 58 ~~~-~~-~~~Dvvf~a~-~~~~s~~~a~~~~~~G~~vIDlSa~ 97 (366)
T 3pwk_A 58 TET-AF-EGVDIALFSA-GSSTSAKYAPYAVKAGVVVVDNTSY 97 (366)
T ss_dssp CTT-TT-TTCSEEEECS-CHHHHHHHHHHHHHTTCEEEECSST
T ss_pred CHH-Hh-cCCCEEEECC-ChHhHHHHHHHHHHCCCEEEEcCCc
Confidence 211 12 3788888877 5666777777777778887766654
No 490
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=77.96 E-value=4.5 Score=41.10 Aligned_cols=33 Identities=15% Similarity=0.247 Sum_probs=29.2
Q ss_pred CCCceEEEEecchHHHHHHHHHHHC-CCeEEEEE
Q 008128 414 LKGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVS 446 (577)
Q Consensus 414 l~GkrVaIQGfGNVG~~aA~~L~e~-GAkVVaIS 446 (577)
-.|.+|+|.|.|.||..+++.+... |++|+++.
T Consensus 185 ~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~ 218 (359)
T 1h2b_A 185 YPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALD 218 (359)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEe
Confidence 3688999999999999999999989 99977664
No 491
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=77.95 E-value=2 Score=42.58 Aligned_cols=34 Identities=21% Similarity=0.466 Sum_probs=30.3
Q ss_pred CCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEc
Q 008128 414 LKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 414 l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISD 447 (577)
+++++|.|.| .|-+|+++++.|.+.|.+|+++.-
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 57 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDN 57 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 5689999999 699999999999999999887754
No 492
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=77.94 E-value=2.1 Score=41.42 Aligned_cols=37 Identities=19% Similarity=0.082 Sum_probs=29.8
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEcC
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISDs 448 (577)
.++.+|+|+|.| .|-+|+++|+.|.+.|++|+.+.+.
T Consensus 22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r 59 (267)
T 4iiu_A 22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHR 59 (267)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 467899999998 5899999999999999998666554
No 493
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=77.93 E-value=2.1 Score=41.78 Aligned_cols=34 Identities=29% Similarity=0.348 Sum_probs=29.6
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~ 57 (266)
T 3grp_A 23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLH 57 (266)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 368999999998 5889999999999999996544
No 494
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=77.85 E-value=2 Score=41.95 Aligned_cols=33 Identities=15% Similarity=0.141 Sum_probs=29.2
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEE
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaI 445 (577)
+++||+++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 36 (280)
T 1xkq_A 3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTIT 36 (280)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 47899999998 6899999999999999997655
No 495
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=77.83 E-value=2.7 Score=36.50 Aligned_cols=34 Identities=15% Similarity=0.265 Sum_probs=30.2
Q ss_pred CCceEEEEecchHHHHHHHHHHHC-CCeEEEEEcC
Q 008128 415 KGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDA 448 (577)
Q Consensus 415 ~GkrVaIQGfGNVG~~aA~~L~e~-GAkVVaISDs 448 (577)
+.++++|.|.|..|..+++.|.+. |.+++++.|.
T Consensus 3 ~~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~ 37 (141)
T 3nkl_A 3 AKKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDD 37 (141)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEEC
Confidence 457999999999999999999875 8999999886
No 496
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=77.83 E-value=4.2 Score=41.46 Aligned_cols=32 Identities=22% Similarity=0.344 Sum_probs=28.2
Q ss_pred CCCceEEEEecchHHHHHHHHHHHCCC-eEEEE
Q 008128 414 LKGLRCVVSGSGKIAMHVLEKLIAYGA-IPVSV 445 (577)
Q Consensus 414 l~GkrVaIQGfGNVG~~aA~~L~e~GA-kVVaI 445 (577)
-.|.+|+|.|.|.||..+++.+...|+ +|+++
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~ 226 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAI 226 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 368899999999999999999999999 66654
No 497
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=77.73 E-value=4.9 Score=40.80 Aligned_cols=32 Identities=25% Similarity=0.161 Sum_probs=29.0
Q ss_pred CCceEEEEecchHHHHHHHHHHHCCCeEEEEE
Q 008128 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 415 ~GkrVaIQGfGNVG~~aA~~L~e~GAkVVaIS 446 (577)
.|.+|+|.|.|.||..+++.+...|++|+++.
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~ 210 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVIS 210 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEc
Confidence 68899999999999999999999999977665
No 498
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=77.69 E-value=2.3 Score=41.44 Aligned_cols=35 Identities=26% Similarity=0.161 Sum_probs=30.5
Q ss_pred CCCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~ 59 (269)
T 4dmm_A 24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNY 59 (269)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 578999999998 58999999999999999976543
No 499
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=77.65 E-value=3.8 Score=40.98 Aligned_cols=35 Identities=20% Similarity=0.246 Sum_probs=30.4
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEEc
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaISD 447 (577)
--.|++|+|.| .|.+|..+++.+...|++|+++..
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~ 181 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS 181 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 34689999999 899999999999999999876653
No 500
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=77.60 E-value=2 Score=41.94 Aligned_cols=34 Identities=21% Similarity=0.209 Sum_probs=29.8
Q ss_pred CCCCceEEEEe-cchHHHHHHHHHHHCCCeEEEEE
Q 008128 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (577)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aA~~L~e~GAkVVaIS 446 (577)
+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 60 (283)
T 1g0o_A 26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNY 60 (283)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 57899999998 68999999999999999976543
Done!