Query 008131
Match_columns 576
No_of_seqs 290 out of 1861
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 18:52:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008131.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008131hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gse_A Menaquinone-specific is 100.0 3E-101 1E-105 833.0 37.5 438 77-562 4-452 (458)
2 3bzm_A Menaquinone-specific is 100.0 4.4E-92 1.5E-96 759.2 43.0 426 79-561 3-430 (431)
3 3h9m_A P-aminobenzoate synthet 100.0 1.2E-79 4E-84 658.9 38.0 372 162-562 45-428 (436)
4 3os6_A Isochorismate synthase 100.0 2.1E-79 7.3E-84 652.3 32.5 355 164-566 32-396 (399)
5 2fn0_A Salicylate synthetase, 100.0 2.4E-79 8.2E-84 660.2 31.3 402 109-560 11-436 (437)
6 3hwo_A Isochorismate synthase 100.0 8.1E-79 2.8E-83 646.3 33.3 353 164-561 32-393 (394)
7 1qdl_A Protein (anthranilate s 100.0 1.6E-77 5.3E-82 643.1 32.0 398 109-561 4-421 (422)
8 1i1q_A Anthranilate synthase c 100.0 2.3E-75 7.8E-80 640.1 38.5 369 183-563 122-514 (520)
9 1k0e_A P-aminobenzoate synthas 100.0 5.6E-75 1.9E-79 628.2 34.2 376 161-560 44-452 (453)
10 3log_A Isochorismate synthase/ 100.0 5.8E-75 2E-79 624.9 32.3 352 183-560 89-449 (451)
11 4grh_A Aminodeoxychorismate sy 100.0 6.1E-75 2.1E-79 626.3 27.8 382 160-561 43-455 (457)
12 3r75_A Anthranilate/para-amino 100.0 9.8E-64 3.3E-68 562.8 21.0 269 288-563 123-400 (645)
No 1
>3gse_A Menaquinone-specific isochorismate synthase; MENF,yersinia P CO92, YPO2528, csgid, isomerase, structural genomics; 2.28A {Yersinia pestis} SCOP: d.161.1.0
Probab=100.00 E-value=2.8e-101 Score=833.04 Aligned_cols=438 Identities=28% Similarity=0.459 Sum_probs=371.6
Q ss_pred CCCHHHHHHHHHHHHhhcccCCCCCCCceEEEEEEc--cCccchHHHHHhccCCCCeeeeccCCCCCCCCcccccCCCCC
Q 008131 77 VPSPALALEKLHSAIFGLKSNPPPFTSGIIRLQVPI--EEQIQAIDWLHAQHQLLPRCFFSGRSRKKDSDISVVFPNGNG 154 (576)
Q Consensus 77 ~~~l~~a~~~l~~~~~~~~~~~~~~~s~ivrl~~~i--~~~~d~L~WL~aQ~~~~prfyw~~R~~~~~~~~~~~~~~~~~ 154 (576)
..+++.|++.|.+.++++. + ...++.+|++++ ++++++|+||++|+.| |||||++| |+
T Consensus 4 ~~~~~~~~~~l~~~l~~~~--~--~~~~~~~~~~~~~~~~~~~~l~wL~aQ~~~-prfyw~~r---------------d~ 63 (458)
T 3gse_A 4 MKQLSGLLGELRQKLCAGF--P--EQAGIQQLIFPAPGLVGRQLLEWLTAQTHF-PQFYWRHR---------------DN 63 (458)
T ss_dssp --CHHHHHHHHHHHHHSCC--C--SSSEEEEEEEEECGGGGGSHHHHHHTCCCS-CEEEEECT---------------TS
T ss_pred HHHHHHHHHHHHHHHHhhC--C--CCCCeEEEEEEecCCCCCCHHHHHhcCCCC-CceeEECC---------------CC
Confidence 3567788888888777665 2 245666666666 5688999999999998 99999999 44
Q ss_pred CCccccCceEEEEeceeEEEecCCCCChhhHHHHHHHHhc--cCCceecccccccccccC-------CcccccccceEEE
Q 008131 155 QSSVTHNLVSVAGVGSAVFFRNLHPFSYNDWRSIKRFIST--ECPMIRAYGAMRFDARAN-------ISSEWEDFGSFYF 225 (576)
Q Consensus 155 ~~~~~~~~~~vaGlG~a~~f~~~~~~~~~~w~~~~~fl~~--~~p~~r~~Gg~~FD~~~~-------~~~~W~~f~~~~F 225 (576)
++ ++||+|++..|++.. .+++|++. ..+.+|+||||+||+... .+++|.+|++++|
T Consensus 64 ~~-------~~ag~G~~~~f~~~~--------~~~~fl~~~~~~~~~r~~Gg~~Fd~~~~~~~~~~~~~~~W~~f~~~~f 128 (458)
T 3gse_A 64 HE-------EAAVCGQTRSFADMK--------DADDFIQQNPDANGLRIWGLNAFEPVMVFGQLTDNGLVSGKNAQASFL 128 (458)
T ss_dssp SE-------EEEEEEEEEEESSHH--------HHHHHHHTCTTCTTCCEEEEEEEEEECC-------------CCEEEEE
T ss_pred Ce-------EEEEeceEEEeCChH--------HHHHHHhcccCCCCcEEEEccccCCcccccccccccccccccCCCEEE
Confidence 44 999999999996642 67888876 457889999999999763 6789999999999
Q ss_pred EeeEEEEEEeCCeEEEEEEeecCChhhHHHHHHHHHHHHHHHHhhhhhhhcccccccccccccCCCCCHHHHHHHHHHHH
Q 008131 226 MIPQVEFDELERSSTLAVTLAWDDALSWTWAKAISTLESTMDKVSSKIVRLQKEVSRTFILSNHHSPSKMHWDLAVKKAL 305 (576)
Q Consensus 226 ~LP~i~l~~~~~~~~L~~~l~~d~~~~~~~~~a~~~L~~~l~~i~~~~~~~~~~~~~~~i~~~~~~p~~~~w~~~V~~a~ 305 (576)
|||+++|.+.+++++|++|+.+++.+.++..++++. ++.+.... +.++.++.+....+.+++++|.+.|++++
T Consensus 129 ~LP~~~l~~~~~~~~l~~n~~~~~~~~~~~~~~~~~----l~~l~~~~---~~~~~~~~~~~~~~~~~~~~y~~~V~~~~ 201 (458)
T 3gse_A 129 FLPRLEILRRGKKTSLTLNLSSETSLQKDALQAITF----IDQLMAAR---ALPVLNARIQHSSHTPGYPQWRNLIQQAL 201 (458)
T ss_dssp EEEEEEEEEETTEEEEEEEEEESSCHHHHHHHHHHH----HHTCCCCC---CCCCCCCEEEEEEEESCHHHHHHHHHHHH
T ss_pred EcceEEEEEECCeEEEEEEEecCCccHHHHHHHHHH----HHhccccC---CCCCCccccccCcCCCCHHHHHHHHHHHH
Confidence 999999999999999999987665543444444432 23332211 11122234555667889999999999999
Q ss_pred HHHHcCCCCceeEEecceeEEeecCCCCHHHHHHHhhhccCCCCceecccCCCCCeeeccCccceEEEECCEEEEEecCC
Q 008131 306 EIINRSSTPLTKVVLARSSRVITATDIDPIAWLACLKQVEGENAYQFCLQPPDAPAFIGNTPEQLFHRKWLKITSEALAG 385 (576)
Q Consensus 306 ~~I~~gd~~l~KVVLAR~~~~~~~~~~dp~~ll~~L~~~~~p~~y~f~~~~~~~~~fvGaSPE~L~~~~~~~l~T~aLAG 385 (576)
++|++| +++||||||++.+.++.++||+.+|++|+ ..||++|+|++.++++..|+|+|||+|++++++.+.|+||||
T Consensus 202 ~~I~~G--d~~kVvLsr~~~~~~~~~~~~~~~~~~lr-~~np~~y~f~~~~~~~~~~lgaSPE~lv~~~~~~v~T~piAG 278 (458)
T 3gse_A 202 NDIEQQ--KLDKVVLARTTTLTLNKPLSCAAFMAASR-QVNHRCYHFMLRFDDRQAFLGSSPERLYLRQQLHLETEALAG 278 (458)
T ss_dssp HHHC-----CCEEEEEEEEEEEESSCCCHHHHHHHHH-HHCTTCEEEEEESSSSEEEEEEECCEEEEEETTEEEEEEEEE
T ss_pred HHHHcC--CceEEEcccEEEEEeCCCCCHHHHHHHHH-HhCCCceEEEEEcCCCcEEEEcCchheEEEECCEEEEEECCC
Confidence 999999 69999999999999999999999999999 999999999999876678999999999999999999999999
Q ss_pred CCCCCCChHHhHHHHHHhhcCCCchhhhhhHHHHHHhHHhhccCeeEeCCcceEEEcCCeEEEEeEEEEEeCCCCCHHHH
Q 008131 386 TRGRGGTTALDLQIEHDLLSSPKDHLEFTIVRESIRSKLEAVCNRVVIEPKKAIRKLPRVQHLYARLAGRLRSEDEEYDI 465 (576)
Q Consensus 386 T~~rg~~~~eD~~l~~~Ll~s~Ke~~Eh~~Vvd~i~~~L~~~c~~v~v~~~~~i~~~~~vqHL~t~I~g~L~~~~~~~dl 465 (576)
|+|||.|+++|.+++++|++|+||++||.||||+|+|+|+++|.+|+|++ +.|+++++||||+|+|+|+|+++ +.+|+
T Consensus 279 T~~Rg~~~~eD~~l~~~Ll~d~Ke~aEh~mvVD~irndL~~~~~~v~V~~-~~v~~~~~V~HL~S~V~g~L~~~-~~~dl 356 (458)
T 3gse_A 279 TVSNLDSDPQAAVLADWLMHDEKNQRENLLVVDDICQRLQGGVTAVDVMP-PEIIRLRKVQHLRRRICAQLSRA-SDTDC 356 (458)
T ss_dssp EEECCSSHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHGGGEEEEEECC-CEEEECSSEEEEEEEEEEEESSC-CHHHH
T ss_pred CccCCCChHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhCCceEECC-cEEEEeCcEEEEeeEEEEEECCC-CHHHH
Confidence 99999999999999999999999999999999999999999999999996 99999999999999999999999 99999
Q ss_pred HHhcCCCCCCCCcChHHHHHHHHHhCCCCCcceeeeEEEEeCCCceEEEEEeeEEEecCcEEEEEecceecCCCCcchHH
Q 008131 466 MASLHPSPAVCGFPTEEARLLIAETEVFDRGMYAGPVGWFGGGESEFAVGIRSALVEKGLGALIYAGTGIVEGSNPSLEW 545 (576)
Q Consensus 466 l~aLhPtpAV~G~Pk~~A~~~I~~~E~~~RG~YaG~vG~i~~g~~ef~V~IRsa~i~~~~~~~l~AGaGIV~~S~p~~Ew 545 (576)
|++|||||||||+||++||++|+++|+++||||||+|||++.+++||+|+|||++++++ .+++|||||||+||+|+.||
T Consensus 357 l~al~PtgavtGaPK~~AmeiI~elE~~~RG~Y~G~vG~i~~~~~d~~V~IRt~~~~~~-~~~l~AGaGIV~dS~pe~E~ 435 (458)
T 3gse_A 357 LQRLQPTAAVAGLPREAARQFIAKHELFSRGWYAGSAGYLSLKRTEFSVALRSARVDGQ-QIHLYAGAGIVAGSDAEQEW 435 (458)
T ss_dssp HHHHSSCHHHHEESHHHHHHHHHHHCCSCCTTTTSEEEEECSSEEEEEECCSEEEEETT-EEEEEEEEEECTTCCHHHHH
T ss_pred HHHhCCCCcCCcccHHHHHHHHHHhCCCCCceEEEEEEEEECCCCEEEEEEEEEEEECC-EEEEEeeeeEcCCCChHHHH
Confidence 99999999999999999999999999999999999999999888999999999999975 99999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcc
Q 008131 546 DELELKTSQFTKFLKLE 562 (576)
Q Consensus 546 ~Et~~K~~~ll~~l~~~ 562 (576)
+||++|+++|+++|+.+
T Consensus 436 ~Et~~K~~~ll~al~~~ 452 (458)
T 3gse_A 436 QEIDNKSAGLQSLLEHE 452 (458)
T ss_dssp HHC------CGGGSEEC
T ss_pred HHHHHHHHHHHHHhccC
Confidence 99999999999999876
No 2
>3bzm_A Menaquinone-specific isochorismate synthase; isomerase, menaquinone biosynthesis; HET: CIT; 1.95A {Escherichia coli} SCOP: d.161.1.1 PDB: 2eua_A* 3bzn_A
Probab=100.00 E-value=4.4e-92 Score=759.20 Aligned_cols=426 Identities=28% Similarity=0.442 Sum_probs=364.8
Q ss_pred CHHHHHHHHHHHHhhcccCCCCCCCceEEEEEEccCccchHHHHHhccCCCCeeeeccCCCCCCCCcccccCCCCCCCcc
Q 008131 79 SPALALEKLHSAIFGLKSNPPPFTSGIIRLQVPIEEQIQAIDWLHAQHQLLPRCFFSGRSRKKDSDISVVFPNGNGQSSV 158 (576)
Q Consensus 79 ~l~~a~~~l~~~~~~~~~~~~~~~s~ivrl~~~i~~~~d~L~WL~aQ~~~~prfyw~~R~~~~~~~~~~~~~~~~~~~~~ 158 (576)
+++.++..|.+.+.+.. ++....+++++++|+++.+++|+||.+|+.+ |||||++| +++
T Consensus 3 ~~~~~~~~l~~~~~~~~--~~~~~~~~~s~~~~i~~~~~~l~~l~~~~~~-~~f~~~~r---------------~~~--- 61 (431)
T 3bzm_A 3 SLTTALENLLRHLSQEI--PATPGIRVIDIPFPLKDAFDALSWLASQQTY-PQFYWQQR---------------NGD--- 61 (431)
T ss_dssp HHHHHHHHHHHHHTSCC--CSSSEEEEEEEEECCSSCCCHHHHHHTCCCS-CEEEEECT---------------TSS---
T ss_pred hHHHHHHHHHHHHhhhc--cccCCcEEEEEEEECCCCCCHHHHhhcCCCC-CcEEEEec---------------CCC---
Confidence 45677778877775543 2224566899999997689999999999987 99999999 333
Q ss_pred ccCceEEEEeceeEEEecCCCCChhhHHHHHHHHhcc--CCceecccccccccccCCcccccccceEEEEeeEEEEEEeC
Q 008131 159 THNLVSVAGVGSAVFFRNLHPFSYNDWRSIKRFISTE--CPMIRAYGAMRFDARANISSEWEDFGSFYFMIPQVEFDELE 236 (576)
Q Consensus 159 ~~~~~~vaGlG~a~~f~~~~~~~~~~w~~~~~fl~~~--~p~~r~~Gg~~FD~~~~~~~~W~~f~~~~F~LP~i~l~~~~ 236 (576)
.+++|+|++..|+. +..+++|+... .+.+++||||+||+.. ..||||++++.+.+
T Consensus 62 ----~~~~g~G~~~~~~~--------~~~a~~~l~~~~~~~~~~~~G~~~Fd~~~-----------~~~~lP~~~~~~~~ 118 (431)
T 3bzm_A 62 ----EEAVVLGAITRFTS--------LDQAQRFLRQHPEHADLRIWGLNAFDPSQ-----------GNLLLPRLEWRRCG 118 (431)
T ss_dssp ----EEEEEEEEEEEESS--------HHHHHHHHHTCTTCTTCCEEEEECSSTTC-----------EEEEEEEEEEEEET
T ss_pred ----eEEEEEceEEEECC--------HHHHHHHHHhcccCCCcEEEEEEEECCCC-----------CeEEeceEEEEEEC
Confidence 38999999999943 23577777753 4567899999999753 13999999999999
Q ss_pred CeEEEEEEeecCChhhHHHHHHHHHHHHHHHHhhhhhhhcccccccccccccCCCCCHHHHHHHHHHHHHHHHcCCCCce
Q 008131 237 RSSTLAVTLAWDDALSWTWAKAISTLESTMDKVSSKIVRLQKEVSRTFILSNHHSPSKMHWDLAVKKALEIINRSSTPLT 316 (576)
Q Consensus 237 ~~~~L~~~l~~d~~~~~~~~~a~~~L~~~l~~i~~~~~~~~~~~~~~~i~~~~~~p~~~~w~~~V~~a~~~I~~gd~~l~ 316 (576)
+.+++++|+..+......+..+++ .+..+... .+.++....+......+++++|.+.|++++++|++| +++
T Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~y~~~V~~~~~~I~~G--~~~ 189 (431)
T 3bzm_A 119 GKATLRLTLFSESSLQHDAIQAKE----FIATLVSI---KPLPGLHLTTTREQHWPDKTGWTQLIELATKTIAEG--ELD 189 (431)
T ss_dssp TEEEEEEEEEESSCHHHHHHHHHH----HHHHCCCC---CCCCCCCCCEEEEEEESCHHHHHHHHHHHHHHHHHS--SCC
T ss_pred CeEEEEEEecccchhHHHHHHHHH----HHHhcccC---CCCCcccccceecccCCCHHHHHHHHHHHHHHHHcC--Cce
Confidence 999999987654432223333222 22222211 011111111233345689999999999999999999 699
Q ss_pred eEEecceeEEeecCCCCHHHHHHHhhhccCCCCceecccCCCCCeeeccCccceEEEECCEEEEEecCCCCCCCCChHHh
Q 008131 317 KVVLARSSRVITATDIDPIAWLACLKQVEGENAYQFCLQPPDAPAFIGNTPEQLFHRKWLKITSEALAGTRGRGGTTALD 396 (576)
Q Consensus 317 KVVLAR~~~~~~~~~~dp~~ll~~L~~~~~p~~y~f~~~~~~~~~fvGaSPE~L~~~~~~~l~T~aLAGT~~rg~~~~eD 396 (576)
||||||++.+.++.++||+.+|++|+ ..||++|+|++.++++..|||+|||+|++++++.+.|+|||||+|||.|+++|
T Consensus 190 kvvLsr~~~~~~~~~~~~~~~~~~lr-~~np~~y~~~~~~~~~~~~~gaSPE~l~~~~~~~v~t~plaGT~~r~~~~~eD 268 (431)
T 3bzm_A 190 KVVLARATDLHFASPVNAAAMMAASR-RLNLNCYHFYMAFDGENAFLGSSPERLWRRRDKALRTEALAGTVANNPDDKQA 268 (431)
T ss_dssp EEEEEEEEEEEESSCCCHHHHHHHHH-HHSCSSEEEEEECSSSEEEEEEECCEEEEEETTEEEEEEEEEEEECCSSHHHH
T ss_pred EEEeccEEEEecCCCCCHHHHHHHhh-HhCCCceEEEEEcCCCCEEEEcCccceEEEeCCEEEEEeecCCCCCCCChHHH
Confidence 99999999999999999999999999 99999999999987667999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCchhhhhhHHHHHHhHHhhccCeeEeCCcceEEEcCCeEEEEeEEEEEeCCCCCHHHHHHhcCCCCCCC
Q 008131 397 LQIEHDLLSSPKDHLEFTIVRESIRSKLEAVCNRVVIEPKKAIRKLPRVQHLYARLAGRLRSEDEEYDIMASLHPSPAVC 476 (576)
Q Consensus 397 ~~l~~~Ll~s~Ke~~Eh~~Vvd~i~~~L~~~c~~v~v~~~~~i~~~~~vqHL~t~I~g~L~~~~~~~dll~aLhPtpAV~ 476 (576)
++++++|++|+||++||.||||+|||+|+++|.+|+|+. |.|+++++||||+|+|+|+|+++ +.+|++++||||||||
T Consensus 269 ~~~~~~Ll~s~Ke~aEh~mvVDlirndL~~~~~~v~V~~-~~v~~~~~v~HL~S~V~g~L~~~-~~~d~l~al~P~~avt 346 (431)
T 3bzm_A 269 QQLGEWLMADDKNQRENMLVVEDICQRLQADTQTLDVLP-PQVLRLRKVQHLRRCIWTSLNKA-DDVICLHQLQPTAAVA 346 (431)
T ss_dssp HHHHHHHTTCTTHHHHHHHHHHHHHHHHHTTBSCCEECC-CEEEECSSEEEEEEEEEEEBSSC-CHHHHHHHHSSCTTTT
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhCCceEECC-cEEEEeCcEEEEeeEEEEEECCC-CHHHHHHHhCCCcccC
Confidence 999999999999999999999999999999999999965 99999999999999999999999 9999999999999999
Q ss_pred CcChHHHHHHHHHhCCCCCcceeeeEEEEeCCCceEEEEEeeEEEecCcEEEEEecceecCCCCcchHHHHHHHHHHHHH
Q 008131 477 GFPTEEARLLIAETEVFDRGMYAGPVGWFGGGESEFAVGIRSALVEKGLGALIYAGTGIVEGSNPSLEWDELELKTSQFT 556 (576)
Q Consensus 477 G~Pk~~A~~~I~~~E~~~RG~YaG~vG~i~~g~~ef~V~IRsa~i~~~~~~~l~AGaGIV~~S~p~~Ew~Et~~K~~~ll 556 (576)
|+||++||++|+++|+++||||||+|||++.+++||+|+|||++++++ .+++|||||||+||+|+.||+||++|+++|+
T Consensus 347 GaPk~~A~~~I~~lE~~~RG~Y~G~vG~~~~~~~d~~V~IRt~~~~~~-~~~l~aGaGIv~dS~pe~E~~Et~~K~~~ll 425 (431)
T 3bzm_A 347 GLPRDLARQFIARHEPFTREWYAGSAGYLSLQQSEFCVSLRSAKISGN-VVRLYAGAGIVRGSDPEQEWQEIDNKAAGLR 425 (431)
T ss_dssp EESHHHHHHHHHHHCSSCCTTTTSEEEEECSSEEEEEECCSEEEEETT-EEEEEEEEEECSSCCHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHhcCCCCcceEEEEEEEECCCCEEEEEEEEEEEECC-EEEEEeCceecCCCChHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999889999999999999976 8999999999999999999999999999999
Q ss_pred Hhhhc
Q 008131 557 KFLKL 561 (576)
Q Consensus 557 ~~l~~ 561 (576)
++|+.
T Consensus 426 ~al~~ 430 (431)
T 3bzm_A 426 TLLQM 430 (431)
T ss_dssp TTTC-
T ss_pred HHhcc
Confidence 99863
No 3
>3h9m_A P-aminobenzoate synthetase, component I; para-aminobenzoate synthetase, cytophaga hutchinsonii,YP_678417.1, CHU_1808; HET: PGE; 1.57A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=1.2e-79 Score=658.93 Aligned_cols=372 Identities=16% Similarity=0.228 Sum_probs=294.2
Q ss_pred ce-EEEEeceeEE-EecCCCCChhhHHHHHHHHhccCCceecccccccccccC------CcccccccceEEEEeeEEEEE
Q 008131 162 LV-SVAGVGSAVF-FRNLHPFSYNDWRSIKRFISTECPMIRAYGAMRFDARAN------ISSEWEDFGSFYFMIPQVEFD 233 (576)
Q Consensus 162 ~~-~vaGlG~a~~-f~~~~~~~~~~w~~~~~fl~~~~p~~r~~Gg~~FD~~~~------~~~~W~~f~~~~F~LP~i~l~ 233 (576)
.+ .++|+|.+.. +.... .+.++.+++++... ...+++|+|+||.... ....|..||+.+|++|+.++.
T Consensus 45 ry~~l~a~g~~~~~~~~~~---~~~~~~l~~~~~~~-~g~~~~Gy~~YD~~~~~E~l~~~~~~~~~~Pd~~~~~~~~~l~ 120 (436)
T 3h9m_A 45 AFRHYLAFGSEAAIHVSDA---TRVFETWNEIKKGY-TNEWIFVFASYDGKNSVEQLHTSKEAGIAFAAATFFIPEHVWE 120 (436)
T ss_dssp SCCCEEEECCSEEEEECCT---TSHHHHHHHHHHHS-TTSCEEEEECGGGGGGTSSCCCCSCBSSCCCSEEEEECSEEEE
T ss_pred CeeEEEEECcEEEEEEcCC---CCHHHHHHHHHHhc-CCCeEEEEECcccccccccCCCCCCCCcCCCcEEEEeeeEEEE
Confidence 34 5999999988 66443 25566677776642 2235899999997532 234699999999999998888
Q ss_pred EeCCeEEEEEEeecCChhhHHHHHHHHHHHHHHHHhhhhhhhcccccccccccccCCCCCHHHHHHHHHHHHHHHHcCCC
Q 008131 234 ELERSSTLAVTLAWDDALSWTWAKAISTLESTMDKVSSKIVRLQKEVSRTFILSNHHSPSKMHWDLAVKKALEIINRSST 313 (576)
Q Consensus 234 ~~~~~~~L~~~l~~d~~~~~~~~~a~~~L~~~l~~i~~~~~~~~~~~~~~~i~~~~~~p~~~~w~~~V~~a~~~I~~gd~ 313 (576)
..++..+|. .++. +..+++|... .... +... . .......+++++|.++|++++++|++|
T Consensus 121 ~d~~~~~l~----~~~~-----~~~~~~l~~~----~~~~---~~~~--~-~~~~~~~~~~~~y~~~V~~~~~~I~~G-- 179 (436)
T 3h9m_A 121 IQPDGILIH----KGSG-----SSLVTEIQHA----EPST---PVQQ--S-DIFVKQVVSKESYFNAFDELQQIIAQG-- 179 (436)
T ss_dssp EETTEEEEE----ESSC-----HHHHHHHHHC--------------C--C-CCCCEESSCHHHHHHHHHHHHHHHHTT--
T ss_pred EECCEEEEE----cCCH-----HHHHHHHHhc----cccC---CCcc--C-CccccccCCHHHHHHHHHHHHHHHHcC--
Confidence 777766653 1211 2222333221 1100 0000 0 112234578999999999999999999
Q ss_pred CceeEEecceeEEeecCCCCHHHHHHHhhhccCCCCceecccCCCCCeeeccCccceEEEECCEEEEEecCCCCCCCCCh
Q 008131 314 PLTKVVLARSSRVITATDIDPIAWLACLKQVEGENAYQFCLQPPDAPAFIGNTPEQLFHRKWLKITSEALAGTRGRGGTT 393 (576)
Q Consensus 314 ~l~KVVLAR~~~~~~~~~~dp~~ll~~L~~~~~p~~y~f~~~~~~~~~fvGaSPE~L~~~~~~~l~T~aLAGT~~rg~~~ 393 (576)
+++||||||++.. ...+||+.+|++|+ ..||++|+|+++++ +..|||+|||+|++++++.+.|+|||||+|||.|+
T Consensus 180 d~~qvvLsr~~~~--~~~~dp~~~y~~Lr-~~nPspy~~~~~~~-~~~~vgaSPE~lv~~~~~~v~t~PiAGT~~Rg~~~ 255 (436)
T 3h9m_A 180 DAYEINYCIPFTA--KGNISPAATYQRLN-KKTPMPFSVYYKFN-TEYILSASPERFIKKTGDTIISQPIKGTSKRGKSK 255 (436)
T ss_dssp SCSEEEEEEEEEE--ECCCCHHHHHHHHH-HHSCCTTEEEEEET-TEEEEECCCCEEEEEETTEEEECCBCCCC------
T ss_pred CCcEEEEEEEEEe--cCCCCHHHHHHHHH-HhCCCceEEEEECC-CCEEEEEchHHheEEECCEEEEEecCCCCCCCcCH
Confidence 6999999997654 45699999999999 99999999999975 47899999999999999999999999999999999
Q ss_pred HHhHHHHHHhhcCCCchhhhhhHHHHHHhHHhhccC--eeEeCCcceEEEcCCeEEEEeEEEEEeCCCCCHHHHHHhcCC
Q 008131 394 ALDLQIEHDLLSSPKDHLEFTIVRESIRSKLEAVCN--RVVIEPKKAIRKLPRVQHLYARLAGRLRSEDEEYDIMASLHP 471 (576)
Q Consensus 394 ~eD~~l~~~Ll~s~Ke~~Eh~~Vvd~i~~~L~~~c~--~v~v~~~~~i~~~~~vqHL~t~I~g~L~~~~~~~dll~aLhP 471 (576)
++|.+++++|++|+||++||.||||++||+|+++|. +|+|++.+.|+++++|+||+|+|+|+|+++.+.+|+++++||
T Consensus 256 ~eD~~l~~~Ll~d~Ke~aEh~mvVDl~RndL~rv~~~gsV~V~~~~~ve~~~~V~HLvS~V~g~L~~~~~~~dll~alfP 335 (436)
T 3h9m_A 256 AEDEMLKQQLGTSEKEQSENTMIVDLVRNDLSRTAVAGSVCVPELSGLYTFPNVHQLISTVQSTIDPACSSIDVIQQAFP 335 (436)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHTTBCTTCCEEEEEEEEEECSSCEEEEEEEEEEBCTTSCHHHHHHHTCS
T ss_pred HHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHhhhcCCCeEEeCCcceEEEcCceEEEEeEEEEEECCCCCHHHHHHHhCC
Confidence 999999999999999999999999999999999998 899999999999999999999999999999999999999999
Q ss_pred CCCCCCcChHHHHHHHHHhCCCCCcceeeeEEEEeC-CCceEEEEEeeEEEec-CcEEEEEecceecCCCCcchHHHHHH
Q 008131 472 SPAVCGFPTEEARLLIAETEVFDRGMYAGPVGWFGG-GESEFAVGIRSALVEK-GLGALIYAGTGIVEGSNPSLEWDELE 549 (576)
Q Consensus 472 tpAV~G~Pk~~A~~~I~~~E~~~RG~YaG~vG~i~~-g~~ef~V~IRsa~i~~-~~~~~l~AGaGIV~~S~p~~Ew~Et~ 549 (576)
||||||+||.+||++|+++|+++||||||+|||++. |++||+|+|||+++++ ++.++++||||||+||+|++||+||.
T Consensus 336 ~gsvtGaPK~rAmeiI~elE~~~RG~Y~G~vG~i~~~G~~d~~V~IRt~~~~~~~~~~~~~AGaGIVadS~Pe~E~~Et~ 415 (436)
T 3h9m_A 336 MGSMTGAPKVNVMKFIDRIESMARGPFSGTVGYMDPHDNFDFNVLIRSIFYNSATQELFMEAGSAITSYAKAETEYEECL 415 (436)
T ss_dssp CGGGSEESHHHHHHHHHHHSSSBCTTTTCEEEEECTTSCEEEECCCSEEEEETTTTEEEEEEEEEECTTCCHHHHHHHHH
T ss_pred CccccChhHHHHHHHHHHhcCCCCCceEEEEEEEecCCCEEEEEEeeEEEEECCCCEEEEEeeeeEcCCCChHHHHHHHH
Confidence 999999999999999999999999999999999995 8999999999999975 24899999999999999999999999
Q ss_pred HHHHHHHHhhhcc
Q 008131 550 LKTSQFTKFLKLE 562 (576)
Q Consensus 550 ~K~~~ll~~l~~~ 562 (576)
+|+++|+++|+..
T Consensus 416 ~K~~all~al~~~ 428 (436)
T 3h9m_A 416 LKITPMIHILNNQ 428 (436)
T ss_dssp HHHHHHHHHTC--
T ss_pred HHHHHHHHHHhhc
Confidence 9999999999764
No 4
>3os6_A Isochorismate synthase DHBC; structural genomics, center for structural genomics of infec diseases, csgid, isomerase; HET: MSE 15P; 2.40A {Bacillus anthracis}
Probab=100.00 E-value=2.1e-79 Score=652.25 Aligned_cols=355 Identities=29% Similarity=0.452 Sum_probs=300.3
Q ss_pred EEEEeceeEEEecCCCCC--hhhHHH-HHHHHhccCCceecccccccccccCCcccccccceEEEEeeEEEEEEeCCeEE
Q 008131 164 SVAGVGSAVFFRNLHPFS--YNDWRS-IKRFISTECPMIRAYGAMRFDARANISSEWEDFGSFYFMIPQVEFDELERSST 240 (576)
Q Consensus 164 ~vaGlG~a~~f~~~~~~~--~~~w~~-~~~fl~~~~p~~r~~Gg~~FD~~~~~~~~W~~f~~~~F~LP~i~l~~~~~~~~ 240 (576)
++.|.|....|+. .++. .++|.. +++-.......+.++|+++||+.. ...|++|+.........
T Consensus 32 ~l~~~G~~~~~~~-~~~~~~~~~~~~~~~~a~~~g~~~p~~vGa~pFd~~~----------~~~l~~P~~~~~~~~~~-- 98 (399)
T 3os6_A 32 TILAEGEFTTVKH-HEIESFPELVQAVLRNAKQAGNPNPIVVGALPFDRRK----------EVQLIVPEYSRISERLQ-- 98 (399)
T ss_dssp EEEEESCSEEEEE-SCGGGHHHHHHHHHHHHHHHSCSSCEEEEEECSSTTS----------CEEEEECSEEEEESCCC--
T ss_pred EEEEEEEEEEecC-CchhhHHHHHHHHHHHHHhcCCCCCEEEEEeccCCCC----------CcEeecccEEEEcCCcc--
Confidence 8999999999976 3333 123332 222222222445699999999864 34799999654321110
Q ss_pred EEEEeecCChhhHHHHHHHHHHHHHHHHhhhhhhhcccccccccccccCCCCCHHHHHHHHHHHHHHHHcCCCCceeEEe
Q 008131 241 LAVTLAWDDALSWTWAKAISTLESTMDKVSSKIVRLQKEVSRTFILSNHHSPSKMHWDLAVKKALEIINRSSTPLTKVVL 320 (576)
Q Consensus 241 L~~~l~~d~~~~~~~~~a~~~L~~~l~~i~~~~~~~~~~~~~~~i~~~~~~p~~~~w~~~V~~a~~~I~~gd~~l~KVVL 320 (576)
+ +.. .. ... . .+.+......+++++|.+.|++++++|++| +++||||
T Consensus 99 ----~--~~~------~~----------~~~------~---~~~~~~~~~~~~~~~y~~~V~~~~~~I~~G--d~~kVVL 145 (399)
T 3os6_A 99 ----L--DPT------NH----------LEI------N---RNLTFEMTPVPDHEVYMKGVKQGIEKIKDG--DLKKIVL 145 (399)
T ss_dssp ----C--C----------------------------------CCCEEEEEESCHHHHHHHHHHHHHHHHTT--SCSEEEE
T ss_pred ----c--ccc------cc----------ccc------C---CCCccceecCCCHHHHHHHHHHHHHHHHcC--CCeEEEe
Confidence 0 000 00 000 0 011223344678999999999999999999 6999999
Q ss_pred cceeEEeecCCCCHHHHHHHhhhccCCCCceecccCCC-----CCeeeccCccceEEEECCEEEEEecCCCCCCCCChHH
Q 008131 321 ARSSRVITATDIDPIAWLACLKQVEGENAYQFCLQPPD-----APAFIGNTPEQLFHRKWLKITSEALAGTRGRGGTTAL 395 (576)
Q Consensus 321 AR~~~~~~~~~~dp~~ll~~L~~~~~p~~y~f~~~~~~-----~~~fvGaSPE~L~~~~~~~l~T~aLAGT~~rg~~~~e 395 (576)
||++.+.++.++||+.+|++|+ ..||++|+|++.+++ +..|+|+|||+|++++++.+.|+|||||+|||.|+++
T Consensus 146 sr~~~~~~~~~~d~~~l~~~Lr-~~np~~y~f~~~~~~~~~~~~~~~vgaSPE~lv~~~~~~v~t~PiAGT~~Rg~~~~e 224 (399)
T 3os6_A 146 SRSLDVKSSGKIDKQKLLRELA-EHNKHGYTFAVNLPKDENENSKTLIGASPELLVSRHGMQVISNPLAGSRPRSDDPVE 224 (399)
T ss_dssp EEEEEEEESSCCCHHHHHHHHH-HTCSSSEEEEEEECCCCC--CEEEEEEECCEEEEEETTEEEECCEEEEEECCSSHHH
T ss_pred eeEEEEECCCCCCHHHHHHHHH-HhCCCceEEEEECCCcccCCCCEEEEeCcchheEEeCCEEEEEECCCCcCCCCChhH
Confidence 9999999999999999999999 999999999998763 2469999999999999999999999999999999999
Q ss_pred hHHHHHHhhcCCCchhhhhhHHHHHHhHHhhccCeeEeCCcceEEEcCCeEEEEeEEEEEeCC-CCCHHHHHHhcCCCCC
Q 008131 396 DLQIEHDLLSSPKDHLEFTIVRESIRSKLEAVCNRVVIEPKKAIRKLPRVQHLYARLAGRLRS-EDEEYDIMASLHPSPA 474 (576)
Q Consensus 396 D~~l~~~Ll~s~Ke~~Eh~~Vvd~i~~~L~~~c~~v~v~~~~~i~~~~~vqHL~t~I~g~L~~-~~~~~dll~aLhPtpA 474 (576)
|++++++|++|+||++||.||||+|||+|+++|..+.|++.+.++++++||||+|+|+|+|++ +.+.+|++++||||||
T Consensus 225 D~~~~~~Ll~s~Ke~aEh~mvVDlirndL~~vc~~v~V~~~~~v~~~~~v~HL~S~V~G~L~~~~~~~~dll~al~Ptga 304 (399)
T 3os6_A 225 DKRRAEELLSSPKDLHEHAVVVEAVAAALRPYCHTLYVPEKPSVIHSEAMWHLSTEVKGELKNPNTSSLELAIALHPTPA 304 (399)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHHHGGGEEEEECCSSCEEEECSSEEEEECCEEEEESCTTCCHHHHHHHHCSCTT
T ss_pred hHHHHHHHhcChHHHHHHHHHHHHHHHHHHhhCCCceeCCceEEEEeCCEEEEEEEEEEEECCCCCCHHHHHHHcCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999997 8999999999999999
Q ss_pred CCCcChHHHHHHHHHhCCCCCcceeeeEEEEeC-CCceEEEEEeeEEEecCcEEEEEecceecCCCCcchHHHHHHHHHH
Q 008131 475 VCGFPTEEARLLIAETEVFDRGMYAGPVGWFGG-GESEFAVGIRSALVEKGLGALIYAGTGIVEGSNPSLEWDELELKTS 553 (576)
Q Consensus 475 V~G~Pk~~A~~~I~~~E~~~RG~YaG~vG~i~~-g~~ef~V~IRsa~i~~~~~~~l~AGaGIV~~S~p~~Ew~Et~~K~~ 553 (576)
|||+||++||++|+++|+++||||+|+|||++. |++||+|+|||++++++ .+++|||||||+||+|+.||+||++|++
T Consensus 305 vtGaPK~~AmeiI~elE~~~RG~Y~G~vG~~~~~G~~d~~V~IRt~~~~~~-~~~l~AGaGIV~dSdPe~E~~Et~~K~~ 383 (399)
T 3os6_A 305 VCGTPMEEAREAIQKIEPFDREFFTGMLGWSDLNGDGEWIVTIRCAEVQEN-TLRLYAGAGVVAESKPEDELAETSAKFQ 383 (399)
T ss_dssp TSEESHHHHHHHHHHHCSSCCTTTTCEEEEEETTSCEEEEECCSEEEEETT-EEEEEEEEEECTTCCHHHHHHHHHHHTH
T ss_pred ccChhHHHHHHHHHHhCCCCCcceEEEEEEEecCCCEEEEEEeeEEEEECC-EEEEEeccEEcCCCChHHHHHHHHHHHH
Confidence 999999999999999999999999999999995 89999999999999975 8999999999999999999999999999
Q ss_pred HHHHhhhcccccc
Q 008131 554 QFTKFLKLEVPLR 566 (576)
Q Consensus 554 ~ll~~l~~~~~~~ 566 (576)
+|+++|+...+.+
T Consensus 384 ~~l~al~~~~~~~ 396 (399)
T 3os6_A 384 TMLKALGLNDSSL 396 (399)
T ss_dssp HHHHHTTCC----
T ss_pred HHHHHHhcChhhh
Confidence 9999999876543
No 5
>2fn0_A Salicylate synthetase, IRP9; salicylate synthase, siderophore, transcription; 1.85A {Yersinia enterocolitica} SCOP: d.161.1.1 PDB: 2fn1_A*
Probab=100.00 E-value=2.4e-79 Score=660.18 Aligned_cols=402 Identities=23% Similarity=0.289 Sum_probs=323.3
Q ss_pred EEEccCccchHHHHH---hccCCCCeeeeccCCCCCCCCcccccCCCCCCCccccCceEEEEeceeEEEecCCC---C--
Q 008131 109 QVPIEEQIQAIDWLH---AQHQLLPRCFFSGRSRKKDSDISVVFPNGNGQSSVTHNLVSVAGVGSAVFFRNLHP---F-- 180 (576)
Q Consensus 109 ~~~i~~~~d~L~WL~---aQ~~~~prfyw~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~vaGlG~a~~f~~~~~---~-- 180 (576)
+.+++ ..+|+.||. .+..+ |++||..+ ++ ..++|+|....++.... +
T Consensus 11 ~~~~~-~~tPl~~~~~l~~~~~~-~~~~l~es---------------~~--------~~~ig~g~~~~l~~~~~~~~~~~ 65 (437)
T 2fn0_A 11 HLALP-EEQWLPTISGVLRQFAE-EECYVYER---------------PP--------CWYLGKGCQARLHINADGTQATF 65 (437)
T ss_dssp C-----CTTHHHHHHHHHHHTTT-SCEEEEEE---------------TT--------EEEEEESCSEEEEECTTSCCEEE
T ss_pred cccCC-CCCHHHHHHHHhcCCCC-CcEEEEEc---------------CC--------CEEEEECCcEEEEEeCCEEEEEe
Confidence 35555 557777765 45554 88998776 11 14789998877743221 0
Q ss_pred ---------C-hhhHHHHHHHHhccC-Cceeccccccccccc---CCcccccccceEEEEeeEEEEEEeCCeEEEEEEee
Q 008131 181 ---------S-YNDWRSIKRFISTEC-PMIRAYGAMRFDARA---NISSEWEDFGSFYFMIPQVEFDELERSSTLAVTLA 246 (576)
Q Consensus 181 ---------~-~~~w~~~~~fl~~~~-p~~r~~Gg~~FD~~~---~~~~~W~~f~~~~F~LP~i~l~~~~~~~~L~~~l~ 246 (576)
. .+.+..+++++.... ...+++|+|+||... .....+..+|+..|++|+.++...++..+|+.+.
T Consensus 66 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~G~~~yd~~~~~e~~~~~~~~~p~~~~~lp~~~~~~d~~~~~l~~~~- 144 (437)
T 2fn0_A 66 IDDAGEQKWAVDSIADCARRFMAHPQVKGRRVYGQVGFNFAAHARGIAFNAGEWPLLTLTVPREELIFEKGNVTVYADS- 144 (437)
T ss_dssp EETTEEEEECCSCHHHHHHHHHTSTTTTTSCEEEEECTHHHHHHHTCCCCCCSSCSEEEEECSEEEEEETTEEEEECC--
T ss_pred ecCCceeeeccCCHHHHHHHHHHhccccCceEEEEEeeccchhhcCCCccCCCCCcEEEEeeeEEEEEECCEEEEEEcC-
Confidence 0 134666777776421 245789999998532 1112346789999999999888888888887542
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhhhhhhcccccccccccccCCCCCHHHHHHHHHHHHHHHHcCCCCceeEEecceeEE
Q 008131 247 WDDALSWTWAKAISTLESTMDKVSSKIVRLQKEVSRTFILSNHHSPSKMHWDLAVKKALEIINRSSTPLTKVVLARSSRV 326 (576)
Q Consensus 247 ~d~~~~~~~~~a~~~L~~~l~~i~~~~~~~~~~~~~~~i~~~~~~p~~~~w~~~V~~a~~~I~~gd~~l~KVVLAR~~~~ 326 (576)
+. . +.+.+...+...... +..+ .. ....+++++|.+.|++++++|++| +++||||||++.+
T Consensus 145 -~~----~---~~~~~~~~l~~~~~~----~~~~--~~---~~~~~~~~~y~~~V~~~~~~I~~G--d~~qvvLsr~~~~ 205 (437)
T 2fn0_A 145 -AD----G---CRRLCEWVKEASTTT----QNAP--LA---VDTALNGEAYKQQVARAVAEIRRG--EYVKVIVSRAIPL 205 (437)
T ss_dssp --------------------------------CB--CC---CCTTTTHHHHHHHHHHHHHHHHTT--SCSEEEEEEEEEC
T ss_pred -cH----H---HHHHHHHHHhccccC----CCCC--Cc---ccccCCHHHHHHHHHHHHHHHHcC--CCcEEEeeeEEec
Confidence 11 1 112222222221110 0000 10 112468999999999999999999 6999999997654
Q ss_pred eecCCCCHHHHHHHhhhccCCCCceecccCCCCCeeeccCccceEEEECCEEEEEecCCCCCCCCChHHhHHHHHHhhcC
Q 008131 327 ITATDIDPIAWLACLKQVEGENAYQFCLQPPDAPAFIGNTPEQLFHRKWLKITSEALAGTRGRGGTTALDLQIEHDLLSS 406 (576)
Q Consensus 327 ~~~~~~dp~~ll~~L~~~~~p~~y~f~~~~~~~~~fvGaSPE~L~~~~~~~l~T~aLAGT~~rg~~~~eD~~l~~~Ll~s 406 (576)
+..+||+.+|++|+ ..||++|+|++++++ ..|+|+|||+|++++++.+.|+|||||+|||.|+++|++++++|++|
T Consensus 206 --~~~~~~~~~y~~lr-~~np~~y~~~~~~~~-~~~~gaSPE~l~~~~~~~v~t~piaGT~~Rg~~~~eD~~l~~~Ll~d 281 (437)
T 2fn0_A 206 --PSRIDMPATLLYGR-QANTPVRSFMFRQEG-REALGFSPELVMSVTGNKVVTEPLAGTRDRMGNPEHNKAKEAELLHD 281 (437)
T ss_dssp --SSCCCHHHHHHHHH-HTCCCSEEEEEEETT-EEEEEEECSEEEEEETTEEEECCEEEEEECCSCHHHHHHHHHHHHHC
T ss_pred --cCCCCHHHHHHHHH-hhCCCCeEEEEEcCC-CEEEEECchhheEEECCEEEEEeecCCCCCCCChHHHHHHHHHHhcC
Confidence 56699999999999 999999999999854 68999999999999999999999999999999999999999999999
Q ss_pred CCchhhhhhHHHHHHhHHhhccC--eeEeCCcceEEEcCCeEEEEeEEEEEeCCCCCHHHHHHhcCCCCCCCCcChHHHH
Q 008131 407 PKDHLEFTIVRESIRSKLEAVCN--RVVIEPKKAIRKLPRVQHLYARLAGRLRSEDEEYDIMASLHPSPAVCGFPTEEAR 484 (576)
Q Consensus 407 ~Ke~~Eh~~Vvd~i~~~L~~~c~--~v~v~~~~~i~~~~~vqHL~t~I~g~L~~~~~~~dll~aLhPtpAV~G~Pk~~A~ 484 (576)
+||++||.||||++||+|+++|. +|+|++.+.|+++++||||+|+|+|+|+++.+.+|+++++||||||||+||.+||
T Consensus 282 ~Ke~aEh~mvVDl~rndL~~v~~~gsV~V~~~~~v~~~~~V~HL~S~V~g~L~~~~~~~d~l~al~P~gsvtGaPK~~Am 361 (437)
T 2fn0_A 282 SKEVLEHILSVKEAIAELEAVCLPGSVVVEDLMSVRQRGSVQHLGSGVSGQLAENKDAWDAFTVLFPSITASGIPKNAAL 361 (437)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHBCTTCCEEEEEEEEEEETTEEEEEEEEEEEBCTTCCHHHHHHHHCSCGGGSEESHHHHH
T ss_pred cHhHHHHHHHHHHHHHHHhhhcCCCcEEeCCCceEEEcCceEEeeeEEEEEECCCCCHHHHHHHcCCCccccCccHHHHH
Confidence 99999999999999999999997 7999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCcceeeeEEEEeCCCceEEEEEeeEEEecCcEEEEEecceecCCCCcchHHHHHHHHHHHHHHhhh
Q 008131 485 LLIAETEVFDRGMYAGPVGWFGGGESEFAVGIRSALVEKGLGALIYAGTGIVEGSNPSLEWDELELKTSQFTKFLK 560 (576)
Q Consensus 485 ~~I~~~E~~~RG~YaG~vG~i~~g~~ef~V~IRsa~i~~~~~~~l~AGaGIV~~S~p~~Ew~Et~~K~~~ll~~l~ 560 (576)
++|+++|+++||||||+|||++.+++||+|+|||++++++ .+++|||||||+||+|+.||+||++|+++|+++|.
T Consensus 362 eiI~elE~~~Rg~Y~G~vG~~~~~~~d~~V~IRt~~~~~~-~~~l~aGaGIV~dS~pe~E~~Et~~K~~~ll~~Lv 436 (437)
T 2fn0_A 362 NAIMQIEKTPRELYSGAILLLDDTRFDAALVLRSVFQDSQ-RCWIQAGAGIIAQSTPERELTETREKLASIAPYLM 436 (437)
T ss_dssp HHHHHHCCSCCTTTTCEEEEEETTEEEEEECCSEEEECSS-CEEEEEEEEECTTCCHHHHHHHHHHHHTTTGGGCB
T ss_pred HHHHHhcCCCCCceeEEEEEEECCCcEEEEEeeEEEEECC-EEEEEeCceEcCCCChHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999669999999999999875 89999999999999999999999999999998874
No 6
>3hwo_A Isochorismate synthase ENTC; chorismate-utilizing enzymes, siderophore, enterobactin, enterobactin biosynthesis, ION T iron, iron transport; HET: ISC; 2.30A {Escherichia coli}
Probab=100.00 E-value=8.1e-79 Score=646.31 Aligned_cols=353 Identities=26% Similarity=0.393 Sum_probs=301.1
Q ss_pred EEEEeceeEEEecC-----CCCC--hhhHHHHH-HHHhccCCceecccccccccccCCcccccccceEEEEeeEEEEEEe
Q 008131 164 SVAGVGSAVFFRNL-----HPFS--YNDWRSIK-RFISTECPMIRAYGAMRFDARANISSEWEDFGSFYFMIPQVEFDEL 235 (576)
Q Consensus 164 ~vaGlG~a~~f~~~-----~~~~--~~~w~~~~-~fl~~~~p~~r~~Gg~~FD~~~~~~~~W~~f~~~~F~LP~i~l~~~ 235 (576)
++.|-|....|+.. .+++ .+.|+++- +........+.++|+++||+..+ ..+++|+..-
T Consensus 32 ~l~~~G~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~g~~~p~~vGa~pFd~~~p----------~~L~vP~~~~--- 98 (394)
T 3hwo_A 32 SFTTSGCFARFDEPAVNGDSPDSPFQQKLAALFADAKAQGIKNPVMVGAIPFDPRQP----------SSLYIPESWQ--- 98 (394)
T ss_dssp CEEEESCSEEECCCCTTCSSTTSHHHHHHHHHHHHHHHTTCSSCEEEEEECSSTTSC----------CEEEECSEEE---
T ss_pred eEEEEEEeeEEccccccccccchhHHHHHHHHHHHHHhcCCCCCeEEEEcccCCCCC----------cEEEecceeE---
Confidence 79999999999654 1222 12343222 22222223345899999998654 3699998431
Q ss_pred CCeEEEEEEeecCChhhHHHHHHHHHHHHHHHHhhhhhhhcccccccccccccCCCCCHHHHHHHHHHHHHHHHcCCCCc
Q 008131 236 ERSSTLAVTLAWDDALSWTWAKAISTLESTMDKVSSKIVRLQKEVSRTFILSNHHSPSKMHWDLAVKKALEIINRSSTPL 315 (576)
Q Consensus 236 ~~~~~L~~~l~~d~~~~~~~~~a~~~L~~~l~~i~~~~~~~~~~~~~~~i~~~~~~p~~~~w~~~V~~a~~~I~~gd~~l 315 (576)
|.... .+.. . .... ....+..+......|++++|.+.|++++++|++| ++
T Consensus 99 -----------~~~~~--~~~~-------~-~~~~-------~~~~~~~~~~~~~~~~~~~y~~~V~~~~~~I~~G--d~ 148 (394)
T 3hwo_A 99 -----------SFSRQ--EKQA-------S-ARRF-------TRSQSLNVVERQAIPEQTTFEQMVARAAALTATP--QV 148 (394)
T ss_dssp -----------ECCHH--HHHH-------H-HHHC-------CCCCCCCEEEEEEESCHHHHHHHHHHHHHHHHSS--SC
T ss_pred -----------ecccc--cccc-------C-cccc-------cccCcccccccccCCCHHHHHHHHHHHHHHHHcC--CC
Confidence 11110 0000 0 0000 0011113334455789999999999999999999 69
Q ss_pred eeEEecceeEEeecCCCCHHHHHHHhhhccCCCCceecccCCCCCeeeccCccceEEEECCEEEEEecCCCCCCCCChHH
Q 008131 316 TKVVLARSSRVITATDIDPIAWLACLKQVEGENAYQFCLQPPDAPAFIGNTPEQLFHRKWLKITSEALAGTRGRGGTTAL 395 (576)
Q Consensus 316 ~KVVLAR~~~~~~~~~~dp~~ll~~L~~~~~p~~y~f~~~~~~~~~fvGaSPE~L~~~~~~~l~T~aLAGT~~rg~~~~e 395 (576)
+||||||++.+.++.++||+.+|++|+ ..||++|+|++.++++..|+|+|||+|++++++.+.|+|||||+||+.|+++
T Consensus 149 ~kVVLsr~~~~~~~~~~d~~~l~~~Lr-~~np~~y~f~~~~~~~~~~vgaSPE~lv~~~~~~v~t~PiAGT~~R~~~~~e 227 (394)
T 3hwo_A 149 DKVVLSRLIDITTDAAIDSGVLLERLI-AQNPVSYNFHVPLADGGVLLGASPELLLRKDGERFSSIPLAGSARRQPDEVL 227 (394)
T ss_dssp SEEEEEEEEEEEESSCCCHHHHHHHHH-HHCSSSEEEEEECSSSCEEEEEECCEEEEEETTEEEEECEEEEEECCSSTTT
T ss_pred eEEEeeeEEEEecCCCCCHHHHHHHHH-HhCCcceEEEEEcCCCCEEEEECchheEEEeCCEEEEEeCCCCcCCCCChhH
Confidence 999999999999999999999999999 9999999999998667899999999999999999999999999999999999
Q ss_pred hHHHHHHhhcCCCchhhhhhHHHHHHhHHhhccCeeEeCCcceEEEcCCeEEEEeEEEEEeCCCCCHHHHHHhcCCCCCC
Q 008131 396 DLQIEHDLLSSPKDHLEFTIVRESIRSKLEAVCNRVVIEPKKAIRKLPRVQHLYARLAGRLRSEDEEYDIMASLHPSPAV 475 (576)
Q Consensus 396 D~~l~~~Ll~s~Ke~~Eh~~Vvd~i~~~L~~~c~~v~v~~~~~i~~~~~vqHL~t~I~g~L~~~~~~~dll~aLhPtpAV 475 (576)
|.+++++|++|+||++||.||||+|||+|+++|.+++|++.+.|+++++||||+|+|+|+|+++.+.+|++++|||||||
T Consensus 228 D~~~~~~Ll~s~Ke~aEh~mvVDlirndL~~vc~~v~V~~~~~v~~~~~V~HL~S~V~G~l~~~~~~~dll~al~PtgaV 307 (394)
T 3hwo_A 228 DREAGNRLLASEKDRHEHELVTQAMKEVLRERSSELHVPSSPQLITTPTLWHLATPFEGKANSQENALTLACLLHPTPAL 307 (394)
T ss_dssp TTTHHHHHHHCHHHHHHHHHHHHHHHHHHHTTEEEEECCSSCEEEECSSEEEEECCEEEEECTTCCHHHHHHHHCSCTTT
T ss_pred hHHHHHHHhcChhHHHHHHHHHHHHHHHHHhhCCCceECCceEEEEcCcEEEEEeEEEEEECCCCCHHHHHHHcCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcChHHHHHHHHHhCCCCCcceeeeEEEEeC-CCceEEEEEeeEEEecCcEEEEEecceecCCCCcchHHHHHHHHHHH
Q 008131 476 CGFPTEEARLLIAETEVFDRGMYAGPVGWFGG-GESEFAVGIRSALVEKGLGALIYAGTGIVEGSNPSLEWDELELKTSQ 554 (576)
Q Consensus 476 ~G~Pk~~A~~~I~~~E~~~RG~YaG~vG~i~~-g~~ef~V~IRsa~i~~~~~~~l~AGaGIV~~S~p~~Ew~Et~~K~~~ 554 (576)
||+||++||++|+++|+++||||+|+|||++. |++||+|+|||++++++ .+++|||||||+||+|+.||+||++|+++
T Consensus 308 tGaPK~~AmeiI~elE~~~RG~Y~G~vG~~~~~G~~d~~V~IRt~~~~~~-~~~l~AGaGIV~dS~Pe~E~~Et~~K~~~ 386 (394)
T 3hwo_A 308 SGFPHQAATQVIAELEPFDRELFGGIVGWCDSEGNGEWVVTIRCAKLREN-QVRLFAGAGIVPASSPLGEWRETGVKLST 386 (394)
T ss_dssp SEESHHHHHHHHHHHCSSCCTTTTSEEEEEETTSCEEEEECCSEEEEETT-EEEEEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHHHhcCCCCcceeEEEEEEecCCCEEEEEEEEEEEEECC-EEEEEeccEEcCCCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999995 79999999999999975 89999999999999999999999999999
Q ss_pred HHHhhhc
Q 008131 555 FTKFLKL 561 (576)
Q Consensus 555 ll~~l~~ 561 (576)
|+++|+.
T Consensus 387 ~l~alg~ 393 (394)
T 3hwo_A 387 MLNVFGL 393 (394)
T ss_dssp HHHHHTC
T ss_pred HHHHhCC
Confidence 9999975
No 7
>1qdl_A Protein (anthranilate synthase (TRPE-subunit)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: d.161.1.1
Probab=100.00 E-value=1.6e-77 Score=643.07 Aligned_cols=398 Identities=25% Similarity=0.340 Sum_probs=326.0
Q ss_pred EEEccCccchHHHHHhc-cCCCCe-eeeccCCCCCCCCcccccCCCCCCCccccCceEEEEeceeEEEecCCCCChhhHH
Q 008131 109 QVPIEEQIQAIDWLHAQ-HQLLPR-CFFSGRSRKKDSDISVVFPNGNGQSSVTHNLVSVAGVGSAVFFRNLHPFSYNDWR 186 (576)
Q Consensus 109 ~~~i~~~~d~L~WL~aQ-~~~~pr-fyw~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~vaGlG~a~~f~~~~~~~~~~w~ 186 (576)
.+|+....+|+..+..- ... |. |+|.+... ++ ..+.++++|++....++.. .+.|.
T Consensus 4 ~~~~~d~~~p~~~~~~l~~~~-~~~~lLeS~~~--------------~~---~~~r~s~ig~~p~~~~~~~----~~~~~ 61 (422)
T 1qdl_A 4 VHPISEFASPFEVFKCIERDF-KVAGLLESIGG--------------PQ---YKARYSVIAWSTNGYLKIH----DDPVN 61 (422)
T ss_dssp EEEGGGSCCHHHHHHHHHHHC-SEEEEEECC------------------------CEEEEEECSSCCEEEC----SCHHH
T ss_pred EecCCccCCHHHHHHHHhcCC-CCEEEEECCCC--------------CC---CCCceeEEEECCceEEEEC----CCHHH
Confidence 45565567888877652 222 44 44544311 01 0345799999988666543 25677
Q ss_pred HHHHHHhccC------Cc-eecccccccccccCC------cccccccceEEEEeeEE--EEEEeCCeEEEEEEeecCChh
Q 008131 187 SIKRFISTEC------PM-IRAYGAMRFDARANI------SSEWEDFGSFYFMIPQV--EFDELERSSTLAVTLAWDDAL 251 (576)
Q Consensus 187 ~~~~fl~~~~------p~-~r~~Gg~~FD~~~~~------~~~W~~f~~~~F~LP~i--~l~~~~~~~~L~~~l~~d~~~ 251 (576)
.+++++.... |. -.++|.|+||..... ...|..+|+..|++|+. .+++..+.++|+.+... .
T Consensus 62 ~l~~~~~~~~~~~~~lpf~gg~~G~~~Yd~~~~~e~~~~~~~~~~~~P~~~~~~~~~~~~~d~~~~~~~l~~~~~~--~- 138 (422)
T 1qdl_A 62 ILNGYLKDLKLADIPGLFKGGMIGYISYDAVRFWEKIRDLKPAAEDWPYAEFFTPDNIIIYDHNEGKVYVNADLSS--V- 138 (422)
T ss_dssp HHHTTTTTCCCCCCSSSCSSEEEEEECGGGGGGTSCCCCCSCBSSCCCSEEEECCSEEEEEEGGGTEEEEESCCSC--S-
T ss_pred HHHHHHHhccCCCcCCCccccEEEEEEHHHhhhhccccCCCCCCCCCCCEEEEcCCEEEEEECCCCeEEEEEccHH--H-
Confidence 7888776421 11 147888899864321 24578899999999985 45666677877654210 0
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhhcccccccccccccCCCCCHHHHHHHHHHHHHHHHcCCCCceeEEecceeEEeecCC
Q 008131 252 SWTWAKAISTLESTMDKVSSKIVRLQKEVSRTFILSNHHSPSKMHWDLAVKKALEIINRSSTPLTKVVLARSSRVITATD 331 (576)
Q Consensus 252 ~~~~~~a~~~L~~~l~~i~~~~~~~~~~~~~~~i~~~~~~p~~~~w~~~V~~a~~~I~~gd~~l~KVVLAR~~~~~~~~~ 331 (576)
+.... +... ........+++++|.+.|++++++|++| +++||||||++.+.+ +
T Consensus 139 -----------------l~~~~---~~~~---~~~~~~~~~~~~~y~~~V~~~~~~I~~G--d~~qvvLsr~~~~~~--~ 191 (422)
T 1qdl_A 139 -----------------GGCGD---IGEF---KVSFYDESLNKNSYERIVSESLEYIRSG--YIFQVVLSRFYRYIF--S 191 (422)
T ss_dssp -----------------CCSCS---CCCE---EEEEEEEESCHHHHHHHHHHHHHHHHHT--SCSEEEEEEEEEEEE--E
T ss_pred -----------------hhCcC---cCCc---cccccccCCCHHHHHHHHHHHHHHHHcC--CceEEEEeEEEEecC--C
Confidence 00000 0000 0111223568999999999999999999 699999999877655 5
Q ss_pred CCHHHHHHHhhhccCCCCceecccCCCCCeeeccCccceEEEECCEEEEEecCCCCCCCCChHHhHHHHHHhhcCCCchh
Q 008131 332 IDPIAWLACLKQVEGENAYQFCLQPPDAPAFIGNTPEQLFHRKWLKITSEALAGTRGRGGTTALDLQIEHDLLSSPKDHL 411 (576)
Q Consensus 332 ~dp~~ll~~L~~~~~p~~y~f~~~~~~~~~fvGaSPE~L~~~~~~~l~T~aLAGT~~rg~~~~eD~~l~~~Ll~s~Ke~~ 411 (576)
+||+++|++|+ ..||++|+|++++++ ..|+|+|||+|++++++.+.|+|||||+|||.|+++|++++++|++|+||++
T Consensus 192 ~~~~~~y~~Lr-~~np~py~~~~~~~~-~~~~gaSPE~l~~~~~~~v~t~PiaGT~~Rg~~~~eD~~~~~~Ll~s~Ke~a 269 (422)
T 1qdl_A 192 GDPLRIYYNLR-RINPSPYMFYLKFDE-KYLIGSSPELLFRVQDNIVETYPIAGTRPRGADQEEDLKLELELMNSEKDKA 269 (422)
T ss_dssp ECTHHHHHHHH-HHSCCSEEEEEEETT-EEEEEEESCEEEEEETTEEEECCEEEEEECCSSHHHHHHHHHHHHTCHHHHH
T ss_pred CCHHHHHHHHH-HhCccCEEEEEECCC-CEEEEeCchheEEEECCEEEEEecCCCCCCCCChHHHHHHHHHHhcCcHHHH
Confidence 79999999999 999999999999854 6999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHhHHhhccC--eeEeCCcceEEEcCCeEEEEeEEEEEeCCCCCHHHHHHhcCCCCCCCCcChHHHHHHHHH
Q 008131 412 EFTIVRESIRSKLEAVCN--RVVIEPKKAIRKLPRVQHLYARLAGRLRSEDEEYDIMASLHPSPAVCGFPTEEARLLIAE 489 (576)
Q Consensus 412 Eh~~Vvd~i~~~L~~~c~--~v~v~~~~~i~~~~~vqHL~t~I~g~L~~~~~~~dll~aLhPtpAV~G~Pk~~A~~~I~~ 489 (576)
||.||||++||+|+++|. +|+|++.+.|+++++||||+|+|+|+|+++.+.+|+++++||||||||+||.+||++|++
T Consensus 270 Eh~miVDl~rndL~~v~~~GsV~V~~~~~ve~~~~V~HL~S~V~g~L~~~~~~~d~l~alfP~gsvtGaPK~rAmeiI~e 349 (422)
T 1qdl_A 270 EHLMLVDLARNDLGKVCVPGTVKVPELMYVEKYSHVQHIVSKVIGTLKKKYNALNVLSATFPAGTVSGAPKPMAMNIIET 349 (422)
T ss_dssp HHHHHHHHHHHHHHTTBCTTCCEEEEEEEEEECSSEEEEEEEEEEEBCTTCCHHHHHHHHCSCGGGSEESHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCcEEeCCCceEEEcCceEEeeeEEEEEECCCCCHHHHHHHhCCCccccCccHHHHHHHHHH
Confidence 999999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCcceeeeEEEEeC-CCceEEEEEeeEEEecCcEEEEEecceecCCCCcchHHHHHHHHHHHHHHhhhc
Q 008131 490 TEVFDRGMYAGPVGWFGG-GESEFAVGIRSALVEKGLGALIYAGTGIVEGSNPSLEWDELELKTSQFTKFLKL 561 (576)
Q Consensus 490 ~E~~~RG~YaG~vG~i~~-g~~ef~V~IRsa~i~~~~~~~l~AGaGIV~~S~p~~Ew~Et~~K~~~ll~~l~~ 561 (576)
+|+++||+|||+|||++. |++||+|+|||++++++ .+++|||||||+||+|+.||+||++|+++|+++|+.
T Consensus 350 lE~~~RG~Y~G~vG~~~~~G~~d~~V~IRt~~~~~~-~~~~~aGaGIv~dS~pe~E~~Et~~K~~~ll~al~~ 421 (422)
T 1qdl_A 350 LEEYKRGPYAGAVGFISADGNAEFAIAIRTAFLNKE-LLRIHAGAGIVYDSNPESEYFETEHKLKALKTAIGV 421 (422)
T ss_dssp HSSSBCTTTTEEEEEEETTSCEEEEEECSEEEEETT-EEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred hcCCCCCceeEEEEEEecCCCEEEEEEeeEEEEECC-EEEEEEcceEeCCCChHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999995 89999999999999975 899999999999999999999999999999999853
No 8
>1i1q_A Anthranilate synthase component I; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: d.161.1.1 PDB: 1i7q_A 1i7s_A*
Probab=100.00 E-value=2.3e-75 Score=640.05 Aligned_cols=369 Identities=23% Similarity=0.311 Sum_probs=306.4
Q ss_pred hhHHHHHHHHhcc-----CCceecccc-cccccccC-----CcccccccceEEEEeeEE--EEEEeCCeEEEEEEeecCC
Q 008131 183 NDWRSIKRFISTE-----CPMIRAYGA-MRFDARAN-----ISSEWEDFGSFYFMIPQV--EFDELERSSTLAVTLAWDD 249 (576)
Q Consensus 183 ~~w~~~~~fl~~~-----~p~~r~~Gg-~~FD~~~~-----~~~~W~~f~~~~F~LP~i--~l~~~~~~~~L~~~l~~d~ 249 (576)
+-|..+++++..- .+.++++|| |+||.... ....|..+|+..|++|+. .+++..+.++|+.+...++
T Consensus 122 ~~~~~l~~~~~~~~~~~~~~~p~f~GG~~~Yd~~~~~e~l~~~~~~~~~Pd~~~~l~~~~lv~Dh~~~~~~l~~~~~~~~ 201 (520)
T 1i1q_A 122 SVFDAFRLLQGVVNIPTQEREAMFFGGLFAYDLVAGFEALPHLEAGNNCPDYCFYLAETLMVIDHQKKSTRIQASLFTAS 201 (520)
T ss_dssp CTTHHHHHHHHTSBCCTTCTTSSEEEEEECGGGGGGTSCCCCCCCSSSCCSEEEEEEEEEEEEETTTTEEEEEEEECSCC
T ss_pred CHHHHHHHHHHHcCCCCccCCCceecchhhhHHHHhhccCCCCcCCCCCCCEEEEeeeEEEEEECCCCEEEEEEEecCCc
Confidence 4566677776531 123568887 99985322 122578899999999984 5677888999988763322
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhhcccccccccccccCCCCCHHHHHHHHHHHHHHHHcCCCCceeEEecceeEEeec
Q 008131 250 ALSWTWAKAISTLESTMDKVSSKIVRLQKEVSRTFILSNHHSPSKMHWDLAVKKALEIINRSSTPLTKVVLARSSRVITA 329 (576)
Q Consensus 250 ~~~~~~~~a~~~L~~~l~~i~~~~~~~~~~~~~~~i~~~~~~p~~~~w~~~V~~a~~~I~~gd~~l~KVVLAR~~~~~~~ 329 (576)
. ..++.+.+++......+.......+.... . .......+++++|.+.|++++++|++| +++||||||++.+.+
T Consensus 202 ~--~~~~~~~~~l~~~~~~l~~~~~~~~~~~~-~-~~~~~~~~~~~~y~~~V~~~~~~I~~G--d~~qvvlsr~~~~~~- 274 (520)
T 1i1q_A 202 D--REKQRLNARLAYLSQQLTQPAPPLPVTPV-P-DMRCECNQSDDAFGAVVRQLQKAIRAG--EIFQVVPSRRFSLPC- 274 (520)
T ss_dssp H--HHHHHHHHHHHHHHHHHHSCCCCCCCCCC-T-TCCCEESSCHHHHHHHHHHHHHHHHTT--SCSEECCEEEEEEEC-
T ss_pred h--HHHHHHHHHHHHHHHHhhccCCCCCcccc-c-ccccccCCCHHHHHHHHHHHHHHHHcC--CCeEEeeeeeecccc-
Confidence 1 12233333333332222211100010000 0 111234578999999999999999999 699999999887765
Q ss_pred CCCCHHHHHHHhhhccCCCCceecccCCCCCeeeccCccceEEEE--CCEEEEEecCCCCCCCCCh------HHhHHHHH
Q 008131 330 TDIDPIAWLACLKQVEGENAYQFCLQPPDAPAFIGNTPEQLFHRK--WLKITSEALAGTRGRGGTT------ALDLQIEH 401 (576)
Q Consensus 330 ~~~dp~~ll~~L~~~~~p~~y~f~~~~~~~~~fvGaSPE~L~~~~--~~~l~T~aLAGT~~rg~~~------~eD~~l~~ 401 (576)
. +|+.+|++|+ ..||++|+|+++.++ ..|+|+|||+|++++ ++.+.|+|||||+|||.|+ ++|.++++
T Consensus 275 -~-~p~~~y~~Lr-~~npspy~~~~~~~~-~~~~gaSPE~ll~~~~~~~~v~t~PiaGT~~Rg~~~~~~~d~~eD~~l~~ 350 (520)
T 1i1q_A 275 -P-SPLAAYYVLK-KSNPSPYMFFMQDND-FTLFGASPESSLKYDAASRQIEIYPIAGTRPRGRRADGTLDRDLDSRIEL 350 (520)
T ss_dssp -S-CHHHHHHHHH-HHSCCSEEEEEECSS-CEEEEEESSCSEEEETTTTEEEECCEEEEEECCBCTTSCBCHHHHHHHHH
T ss_pred -C-CHHHHHHHHH-HHCCCCeEEEEECCC-cEEEEeCchhheeEeccCCEEEEEeccCCCCCCCCcccccChhHHHHHHH
Confidence 2 8999999999 999999999999754 799999999999986 7899999999999999987 99999999
Q ss_pred HhhcCCCchhhhhhHHHHHHhHHhhccC--eeEeCCcceEEEcCCeEEEEeEEEEEeCCCCCHHHHHHhcCCCCCCCCcC
Q 008131 402 DLLSSPKDHLEFTIVRESIRSKLEAVCN--RVVIEPKKAIRKLPRVQHLYARLAGRLRSEDEEYDIMASLHPSPAVCGFP 479 (576)
Q Consensus 402 ~Ll~s~Ke~~Eh~~Vvd~i~~~L~~~c~--~v~v~~~~~i~~~~~vqHL~t~I~g~L~~~~~~~dll~aLhPtpAV~G~P 479 (576)
+|++|+||++||.||||++||+|+++|. +|+|++.+.|+++++||||+|+|+|+|+++.+.+|+++++||+|||||+|
T Consensus 351 ~Ll~d~Ke~aEh~miVDl~RndL~rv~~~gsV~V~~~~~ve~~~~V~HLvS~V~g~L~~~~~~~d~l~a~fP~gsvtGaP 430 (520)
T 1i1q_A 351 DMRTDHKELSEHLMLVDLARNDLARICTPGSRYVADLTKVDRYSYVMHLVSRVVGELRHDLDALHAYRACMNMGTLSGAP 430 (520)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHBCTTCCEEEEEEEEEECSSEEEEEEEEEEEBCTTCCHHHHHHHHCSCGGGSEES
T ss_pred HHhcCcHHHHHHHHHHHHHHHHHHhhcCCCceeecCcceEEEcCCEEEEEeEEEEEECCCCCHHHHHHHhCCCCcccccc
Confidence 9999999999999999999999999998 99999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCcceeeeEEEEeC-CCceEEEEEeeEEEecCcEEEEEecceecCCCCcchHHHHHHHHHHHHHHh
Q 008131 480 TEEARLLIAETEVFDRGMYAGPVGWFGG-GESEFAVGIRSALVEKGLGALIYAGTGIVEGSNPSLEWDELELKTSQFTKF 558 (576)
Q Consensus 480 k~~A~~~I~~~E~~~RG~YaG~vG~i~~-g~~ef~V~IRsa~i~~~~~~~l~AGaGIV~~S~p~~Ew~Et~~K~~~ll~~ 558 (576)
|.+||++|+++|+++||||||+|||++. |++||+|+|||+++.++ .+++|||||||+||+|+.||+||.+|+++|+++
T Consensus 431 K~rAmeiI~elE~~~RG~Y~G~vG~~~~~G~~d~~V~IRt~~~~~~-~~~~~AGaGIV~dS~pe~E~~Et~~K~~~ll~a 509 (520)
T 1i1q_A 431 KVRAMQLIADAEGQRRGSYGGAVGYFTAHGDLDTCIVIRSALVENG-IATVQAGAGIVLDSVPQSEADETRNKARAVLRA 509 (520)
T ss_dssp HHHHHHHHHHHHCSCCTTTTSEEEEEETTSCEEEEECCSEEEEETT-EEEEEEECCBCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcceEEEEEEEecCCCEEEEEEeeEEEEECC-EEEEEeCcEEeCCCChHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999994 89999999999999976 899999999999999999999999999999999
Q ss_pred hhccc
Q 008131 559 LKLEV 563 (576)
Q Consensus 559 l~~~~ 563 (576)
|....
T Consensus 510 l~~a~ 514 (520)
T 1i1q_A 510 IATAH 514 (520)
T ss_dssp HHHHT
T ss_pred HHHhh
Confidence 97653
No 9
>1k0e_A P-aminobenzoate synthase component I; aminodeoxychorismate synthase, chorismate, glutamine, tryptophan, PABA synthase, lyase; HET: TRP; 2.00A {Escherichia coli} SCOP: d.161.1.1 PDB: 1k0g_A*
Probab=100.00 E-value=5.6e-75 Score=628.20 Aligned_cols=376 Identities=18% Similarity=0.212 Sum_probs=297.7
Q ss_pred CceEEEEeceeEEEecCCC------------CChhhHHHHHHHHhcc---------CCc-eecccccccccccCC-----
Q 008131 161 NLVSVAGVGSAVFFRNLHP------------FSYNDWRSIKRFISTE---------CPM-IRAYGAMRFDARANI----- 213 (576)
Q Consensus 161 ~~~~vaGlG~a~~f~~~~~------------~~~~~w~~~~~fl~~~---------~p~-~r~~Gg~~FD~~~~~----- 213 (576)
+.++++|++....+..... ...+.|..+++++... .|. -.++|.|+||.....
T Consensus 44 ~r~S~ig~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~pf~gG~~Gy~~Yd~~~~~e~l~~ 123 (453)
T 1k0e_A 44 SRFDIVVAEPICTLTTFGKETVVSESEKRTTTTDDPLQVLQQVLDRADIRPTHNEDLPFQGGALGLFGYDLGRRFESLPE 123 (453)
T ss_dssp CCEEEEECSCSEEEEEETTEEEEEETTEEEEECSCHHHHHHHHHHHTTCCCCCCTTCSCCSEEEEEECGGGGGGTSCCCC
T ss_pred CceEEEEECCCEEEEEECCEEEEEcCCceeecCCCHHHHHHHHHHhhcCCCCCccCCCccccEEEEEchhhhhhhhcCCC
Confidence 4568888886655432110 1125677888887641 121 257888999875321
Q ss_pred -cccccccceEEEEeeE--EEEEEeCCeEEEEEEeecCChhhHHHHHHHHHHHHHHHHhhhhhhhcccccccccccccCC
Q 008131 214 -SSEWEDFGSFYFMIPQ--VEFDELERSSTLAVTLAWDDALSWTWAKAISTLESTMDKVSSKIVRLQKEVSRTFILSNHH 290 (576)
Q Consensus 214 -~~~W~~f~~~~F~LP~--i~l~~~~~~~~L~~~l~~d~~~~~~~~~a~~~L~~~l~~i~~~~~~~~~~~~~~~i~~~~~ 290 (576)
...+..+|+..|++|. +.+++..+.++|..+. +. ....+.+. ..... +..+. ........
T Consensus 124 ~~~~~~~~Pd~~~~~~~~~iv~Dh~~~~~~l~~~~---~~-----~~~~~~l~----~~~~~----~~~~~-~~~~~~~~ 186 (453)
T 1k0e_A 124 IAEQDIVLPDMAVGIYDWALIVDHQRHTVSLLSHN---DV-----NARRAWLE----SQQFS----PQEDF-TLTSDWQS 186 (453)
T ss_dssp CSBCCCCCCSEEEEEESEEEEEETTTTEEEEEESS---CH-----HHHHHHHH----HCCCC----CCCCC-EECSCCEE
T ss_pred CCCCCCCCCcEEEEecCEEEEEECCCCeEEEEEcC---ch-----HHHHHHHH----HhhcC----CCCCc-ccCccccc
Confidence 2346679999999997 5677888888876532 11 11112111 11100 00000 00011223
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCCCceeEEecceeEEeecCCCCHHHHHHHhhhccCCCCceecccCCCCCeeeccCccce
Q 008131 291 SPSKMHWDLAVKKALEIINRSSTPLTKVVLARSSRVITATDIDPIAWLACLKQVEGENAYQFCLQPPDAPAFIGNTPEQL 370 (576)
Q Consensus 291 ~p~~~~w~~~V~~a~~~I~~gd~~l~KVVLAR~~~~~~~~~~dp~~ll~~L~~~~~p~~y~f~~~~~~~~~fvGaSPE~L 370 (576)
.+++++|.+.|++++++|++| +++||||||++.+.+. .||+++|++|+ ..||++|+|++++++ ..|+|+|||+|
T Consensus 187 ~~~~~~y~~~V~~~~~~I~~G--d~~qvvLsr~~~~~~~--~~~~~~y~~Lr-~~np~py~~~~~~~~-~~~~gaSPE~l 260 (453)
T 1k0e_A 187 NMTREQYGEKFRQVQEYLHSG--DCYQVNLAQRFHATYS--GDEWQAFLQLN-QANRAPFSAFLRLEQ-GAILSLSPERF 260 (453)
T ss_dssp SSCHHHHHHHHHHHHHHHHTT--SCSCEEEEEEEEEEEE--SCHHHHHHHHH-HHHCCTEEEEEECSS-CEEEEEECCBC
T ss_pred cCCHHHHHHHHHHHHHHHHcC--CceEEEeeeEEEccCC--CCHHHHHHHHH-HhCCCCEEEEEECCC-CEEEEecchhe
Confidence 568999999999999999999 6999999998777654 49999999999 999999999999854 78999999999
Q ss_pred EEEECCEEEEEecCCCCCCCCChHHhHHHHHHhhcCCCchhhhhhHHHHHHhHHhhccC--eeEeCCcceEEEcCCeEEE
Q 008131 371 FHRKWLKITSEALAGTRGRGGTTALDLQIEHDLLSSPKDHLEFTIVRESIRSKLEAVCN--RVVIEPKKAIRKLPRVQHL 448 (576)
Q Consensus 371 ~~~~~~~l~T~aLAGT~~rg~~~~eD~~l~~~Ll~s~Ke~~Eh~~Vvd~i~~~L~~~c~--~v~v~~~~~i~~~~~vqHL 448 (576)
++++++.+.|+|||||+|||.|+++|.+++++|++|+||++||.||||++||+|+++|. +|+|++.+.|+++++||||
T Consensus 261 ~~~~~~~v~t~PiaGT~~Rg~~~~eD~~~~~~Ll~~~Ke~aEh~miVDl~rndL~rv~~~GsV~V~~~~~ve~~~~V~HL 340 (453)
T 1k0e_A 261 ILCDNSEIQTRPIKGTLPRLPDPQEDSKQAVKLANSAKDRAENLMIVDLMRNDIGRVAVAGSVKVPELFVVEPFPAVHHL 340 (453)
T ss_dssp EEEETTEEEECCEEEEEEC--------------CCCTTTTTHHHHHHHHHHHHHTTTSCTTCCEEEEEEEEEECSSEEEE
T ss_pred EEEECCEEEEEecCCCCcCCCChHHhHHHHHHHhcCcHhHHHHHHHHHHHHHHhhcccCCCcEEeCCCceEEEeCCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999998 9999999999999999999
Q ss_pred EeEEEEEeCCCCCHHHHHHhcCCCCCCCCcChHHHHHHHHHhCCCCCcceeeeEEEEeC-CCceEEEEEeeEEEecCcEE
Q 008131 449 YARLAGRLRSEDEEYDIMASLHPSPAVCGFPTEEARLLIAETEVFDRGMYAGPVGWFGG-GESEFAVGIRSALVEKGLGA 527 (576)
Q Consensus 449 ~t~I~g~L~~~~~~~dll~aLhPtpAV~G~Pk~~A~~~I~~~E~~~RG~YaG~vG~i~~-g~~ef~V~IRsa~i~~~~~~ 527 (576)
+|+|+|+|+++.+.+|+++++||||||||+||.+||++|+++|+++||+|||+|||++. |++||+|+|||++++++ .+
T Consensus 341 ~S~V~g~L~~~~~~~d~l~a~fP~gsvtGaPK~~AmeiI~elE~~~Rg~Y~G~vG~~~~~G~~d~~V~IRt~~~~~~-~~ 419 (453)
T 1k0e_A 341 VSTITAQLPEQLHASDLLRAAFPGGSITGAPKVRAMEIIDELEPQRRNAWCGSIGYLSFCGNMDTSITIRTLTAING-QI 419 (453)
T ss_dssp EEEEEEECCTTSCHHHHHHHHCSCGGGTCSSHHHHHHHHHHHSSBCCTTTTSEEEEEETTSCEEEBCCCSEEEEETT-EE
T ss_pred eeEEEEEECCCCCHHHHHHHcCCCccccChhHHHHHHHHHHhcCCCCcceEEEEEEEecCCCEEEEEEeeEEEEECC-EE
Confidence 99999999999999999999999999999999999999999999999999999999995 89999999999999975 89
Q ss_pred EEEecceecCCCCcchHHHHHHHHHHHHHHhhh
Q 008131 528 LIYAGTGIVEGSNPSLEWDELELKTSQFTKFLK 560 (576)
Q Consensus 528 ~l~AGaGIV~~S~p~~Ew~Et~~K~~~ll~~l~ 560 (576)
++|||||||+||+|+.||+||++|+++|+++|+
T Consensus 420 ~~~aGaGIv~dS~pe~E~~Et~~K~~~ll~al~ 452 (453)
T 1k0e_A 420 FCSAGGGIVADSQEEAEYQETFDKVNRILKQLE 452 (453)
T ss_dssp EEEEEEEECTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeCceEeCCCChHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999985
No 10
>3log_A Isochorismate synthase/isochorismate-pyruvate LYA; salicylate, anthranilate, isochor synthase, isochorismate lyase, ION transport; 1.73A {Mycobacterium tuberculosis} SCOP: d.161.1.1 PDB: 3veh_A* 3st6_A* 3rv8_A* 2i6y_A 2g5f_A 3rv6_A* 3rv7_A* 3rv9_A*
Probab=100.00 E-value=5.8e-75 Score=624.91 Aligned_cols=352 Identities=21% Similarity=0.238 Sum_probs=300.4
Q ss_pred hhHHHHHHHHhcc-CCceecccccccccccCCc----ccccccceEEEEeeEEEEEEeCCeEEEEEEeecCChhhHHHHH
Q 008131 183 NDWRSIKRFISTE-CPMIRAYGAMRFDARANIS----SEWEDFGSFYFMIPQVEFDELERSSTLAVTLAWDDALSWTWAK 257 (576)
Q Consensus 183 ~~w~~~~~fl~~~-~p~~r~~Gg~~FD~~~~~~----~~W~~f~~~~F~LP~i~l~~~~~~~~L~~~l~~d~~~~~~~~~ 257 (576)
+-+..+++|+..- .+..++||.++||...... ..+.++|+.+|++|+.++....++.+|.. .+ +.
T Consensus 89 ~p~~~l~~~~~~~~~~~~g~~Gy~~yd~~~~~e~l~~~~~~~~P~~~l~~p~~~iv~d~~~~~l~~----~~------~~ 158 (451)
T 3log_A 89 RPGAALGEAVDRLLLETDQAFGWVAFEFGVHRYGLQQRLAPHTPLARVFSPRTRIMVSEKEIRLFD----AG------IR 158 (451)
T ss_dssp CHHHHHHHHHHHHHHHCSEEEEEECGGGGSGGGTCGGGSCTTCEEEEEEEEEEEEEECSSEEEEES----CC------HH
T ss_pred CHHHHHHHHHhhCCccCCcEEEEEChhHhHhhccccccCCCCCCeEEEEeeEEEEEEeCCEEEEEc----CC------HH
Confidence 4556677777531 1124689999999754321 12457899999999988877777766641 11 12
Q ss_pred HHHHHHHHHHHhhhhhhhcccccccccccccCCCCCHHHHHHHHHHHHHHHHcCCCCceeEEecceeEEeecCCCCHHHH
Q 008131 258 AISTLESTMDKVSSKIVRLQKEVSRTFILSNHHSPSKMHWDLAVKKALEIINRSSTPLTKVVLARSSRVITATDIDPIAW 337 (576)
Q Consensus 258 a~~~L~~~l~~i~~~~~~~~~~~~~~~i~~~~~~p~~~~w~~~V~~a~~~I~~gd~~l~KVVLAR~~~~~~~~~~dp~~l 337 (576)
.++.+.+.+...... .+ . + ......+++++|.+.|++++++|++| +++||||||++.+ ....||+.+
T Consensus 159 ~l~~l~~~l~~~~~~---~~--~--~--~~~~~~~~~~~y~~~V~~a~~~I~~G--d~~kVVLsr~~~~--~~~~d~~~~ 225 (451)
T 3log_A 159 HREAIDRLLATGVRE---VP--Q--S--RSVDVSDDPSGFRRRVAVAVDEIAAG--RYHKVILSRCVEV--PFAIDFPLT 225 (451)
T ss_dssp HHHHHHHHHHHCCCC---CC--C--C--CCCCCCCCTTCHHHHHHHHHHHHHTT--SCSEEEEEEEEEC--SSCBCHHHH
T ss_pred HHHHHHHHHhccCCC---CC--C--C--CcccccCCHHHHHHHHHHHHHHHHcC--CceEEEeeeEEec--cCCCCHHHH
Confidence 334444444332110 00 0 1 11234568899999999999999999 6999999997655 456899999
Q ss_pred HHHhhhccCCCCceecccCCCCCeeeccCccceEEEE-CCEEEEEecCCCCCCCCChHHhHHHHHHhhcCCCchhhhhhH
Q 008131 338 LACLKQVEGENAYQFCLQPPDAPAFIGNTPEQLFHRK-WLKITSEALAGTRGRGGTTALDLQIEHDLLSSPKDHLEFTIV 416 (576)
Q Consensus 338 l~~L~~~~~p~~y~f~~~~~~~~~fvGaSPE~L~~~~-~~~l~T~aLAGT~~rg~~~~eD~~l~~~Ll~s~Ke~~Eh~~V 416 (576)
|++|+ ..||++|+|++.+++ ..|+|+|||+|++++ ++.+.|+|||||+|||.|+++|++++++|++|+||++||.||
T Consensus 226 y~~lr-~~np~py~f~~~~~~-~~~vGaSPE~lv~~~~~~~v~t~PiAGT~~Rg~~~~eD~~l~~~Ll~d~Ke~aEh~mv 303 (451)
T 3log_A 226 YRLGR-RHNTPVRSFLLQLGG-IRALGYSPELVTAVRADGVVITEPLAGTRALGRGPAIDRLARDDLESNSKEIVEHAIS 303 (451)
T ss_dssp HHHHH-TTCCCSEEEEEEETT-EEEEEEECSEEEEECTTSEEEECCEEEEEECSSCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHH-hhCCCCeEEEEEcCC-CceeccCccceEEEecCCEEEEEeCCCCcCCCCChHHHHHHHHHHhcChHHHHHHHHH
Confidence 99999 999999999998754 689999999999998 799999999999999999999999999999999999999999
Q ss_pred HHHHHhHHhhccC--eeEeCCcceEEEcCCeEEEEeEEEEEeCCCCCHHHHHHhcCCCCCCCCcChHHHHHHHHHhCCCC
Q 008131 417 RESIRSKLEAVCN--RVVIEPKKAIRKLPRVQHLYARLAGRLRSEDEEYDIMASLHPSPAVCGFPTEEARLLIAETEVFD 494 (576)
Q Consensus 417 vd~i~~~L~~~c~--~v~v~~~~~i~~~~~vqHL~t~I~g~L~~~~~~~dll~aLhPtpAV~G~Pk~~A~~~I~~~E~~~ 494 (576)
||++||+|+++|. +|+|++.+.|+++++||||+|+|+|+|+++.+.+|+|++|||||||||+||.+||++|+++|+++
T Consensus 304 VDl~rndL~~vc~~gsV~V~~~~~v~~~~~V~HL~S~V~G~L~~~~~~~dll~alfPtgavtGaPK~~AmeiI~elE~~~ 383 (451)
T 3log_A 304 VRSSLEEITDIAEPGSAAVIDFMTVRERGSVQHLGSTIRARLDPSSDRMAALEALFPAVTASGIPKAAGVEAIFRLDECP 383 (451)
T ss_dssp HHHHHHHHHTTBCTTCCEEEEEEEEEEETTEEEEEEEEEEEBCTTCCHHHHHHHTCSCGGGSEESHHHHHHHHHHHSCSC
T ss_pred HHHHHHHHHhhcCCCceeeCCCceEEEcCcEEEEEEEEEEEECCCCCHHHHHHHhCCCccccCCChHHHHHHHHHhCCCC
Confidence 9999999999998 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceeeeEEEEeC-CCceEEEEEeeEEEecCcEEEEEecceecCCCCcchHHHHHHHHHHHHHHhhh
Q 008131 495 RGMYAGPVGWFGG-GESEFAVGIRSALVEKGLGALIYAGTGIVEGSNPSLEWDELELKTSQFTKFLK 560 (576)
Q Consensus 495 RG~YaG~vG~i~~-g~~ef~V~IRsa~i~~~~~~~l~AGaGIV~~S~p~~Ew~Et~~K~~~ll~~l~ 560 (576)
||||+|+|||++. |++||+|+|||++++++ .+++|||||||+||+|+.||+||++|+++|+..|.
T Consensus 384 RG~Y~G~vG~i~~~G~~d~~V~IRt~~~~~~-~~~l~AGaGIV~dS~Pe~E~~Et~~K~~~l~~~Lv 449 (451)
T 3log_A 384 RGLYSGAVVMLSADGGLDAALTLRAAYQVGG-RTWLRAGAGIIEESEPEREFEETCEKLSTLTPYLV 449 (451)
T ss_dssp CTTTTSEEEEEETTSCEEEEECCSEEEEETT-EEEEEEEEEECTTCCHHHHHHHHHHHHTTTGGGCC
T ss_pred CccEEEEEEEEECCCCEEEEEEeeEEEEECC-EEEEEEeeeEeCCCChHHHHHHHHHHHHHHHHHhc
Confidence 9999999999995 89999999999999875 89999999999999999999999999999998875
No 11
>4grh_A Aminodeoxychorismate synthase; helix-sheet-helix sandwich, 4-amino-4-deoxychori PABA, transferase; HET: 15P CPS; 2.25A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=6.1e-75 Score=626.27 Aligned_cols=382 Identities=19% Similarity=0.242 Sum_probs=300.8
Q ss_pred cCceEEEEeceeEEEecCCC----------CChhhHHHHHHHHhcc------CCce----ecccccccccccC------C
Q 008131 160 HNLVSVAGVGSAVFFRNLHP----------FSYNDWRSIKRFISTE------CPMI----RAYGAMRFDARAN------I 213 (576)
Q Consensus 160 ~~~~~vaGlG~a~~f~~~~~----------~~~~~w~~~~~fl~~~------~p~~----r~~Gg~~FD~~~~------~ 213 (576)
.+.++++|+.-..+++.... ...+-|..+++++... .+.+ .++|.|+||.... .
T Consensus 43 ~gRyS~ig~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~pf~gG~~Gy~~Yd~~~~~e~~~~~ 122 (457)
T 4grh_A 43 QGRWSLLLVAQGDGLRLDADGQVRDQHDLVQPGTFLQALDRAWQHERLSHDGSHSLPFRGGWALMLDYEVASQIEPVLPA 122 (457)
T ss_dssp CCEEEEEEECCSCEEEECTTSCEEETTCCEECSCHHHHHHHHHHHTCCCCCSCCSSSCCSEEEEEECGGGHHHHSTTSCC
T ss_pred CCCceEEEECCeeEEEEECCcEEEeccceeCCCCHHHHHHHHHHhhcccccccCCCCcccceEEeecccchhhhccCCCC
Confidence 34578888776655533211 0135677888887621 1111 3577778886321 1
Q ss_pred cccccccceEEEEeeE--EEEEEeCCeEEEEEEeecCChhhHHHHHHHHHHHHHHHHhhhhhhhcccccccccccccCCC
Q 008131 214 SSEWEDFGSFYFMIPQ--VEFDELERSSTLAVTLAWDDALSWTWAKAISTLESTMDKVSSKIVRLQKEVSRTFILSNHHS 291 (576)
Q Consensus 214 ~~~W~~f~~~~F~LP~--i~l~~~~~~~~L~~~l~~d~~~~~~~~~a~~~L~~~l~~i~~~~~~~~~~~~~~~i~~~~~~ 291 (576)
...-.++|+..|+++. +.|+|..+..+|..+. .. +..++.+.+. .+.......+. +... .....
T Consensus 123 ~~~~~~~Pd~~~~~~~~~iv~Dh~~~~~~l~~~~---~~-----~~~~~~~~~~--~~~~~~~~~~~-~~~~---~~~~~ 188 (457)
T 4grh_A 123 RARGDGRPTALALRCPAAVLHDHHNEASFVIAEA---GE-----QALLDALVAL--ASAALPEAGQG-WQPP---QAVGE 188 (457)
T ss_dssp CCCTTCCCSEEEEEECEEEEEESTTCCEEEEECT---TC-----HHHHHHHHHT--SSSCCCCSSCC-CCCC---SEEEE
T ss_pred CCCCCCCCcEEEEecCEEEEEECCCCeEEEEEcc---cH-----HHHHHHHHhh--hhhcccccccc-cccc---ccccC
Confidence 1123468999999986 6789999999887652 11 1222222220 11110000000 0001 11235
Q ss_pred CCHHHHHHHHHHHHHHHHcCCCCceeEEecceeEEeecCCCCHHHHHHHhhhccCCCCceecccCCCCCeeeccCccceE
Q 008131 292 PSKMHWDLAVKKALEIINRSSTPLTKVVLARSSRVITATDIDPIAWLACLKQVEGENAYQFCLQPPDAPAFIGNTPEQLF 371 (576)
Q Consensus 292 p~~~~w~~~V~~a~~~I~~gd~~l~KVVLAR~~~~~~~~~~dp~~ll~~L~~~~~p~~y~f~~~~~~~~~fvGaSPE~L~ 371 (576)
.++++|.++|++++++|++| +++||||||++.+.++.++||+++|++|+ ..||++|+|++++++ ..|+|+|||+|+
T Consensus 189 ~~~~~y~~~V~~~~~~I~~G--d~~qvvLsr~~~~~~~~~~dp~~ly~~Lr-~~nPspy~~~~~~~~-~~~vgaSPE~lv 264 (457)
T 4grh_A 189 DAPQRFTDGVRRVIEYLRAG--DVFQVNLSRRWNAQFAAPVSPQALYAQLR-RANPAPFAGLFSAHG-RHVVSSSPERLV 264 (457)
T ss_dssp CCHHHHHHHHHHHHHHHHHT--SCSEEEEEEEEEEECSSCCCHHHHHHHHH-HHCCCSSEEEEEETT-EEEEESSCEEEE
T ss_pred CCHHHHHHHHHHHHHHHHcC--CceEEEeeeEEEEecCCCCCHHHHHHHHH-HhCCCCeEEEEECCC-CEEEEEChhhhE
Confidence 68999999999999999999 69999999999999989999999999999 999999999999865 799999999999
Q ss_pred EEECCEEEEEecCCCCCCCCChHHhHHHHHHhhcCCCchhhhhhHHHHHHhHHhhccC--eeEeCCcceEEEcCCeEEEE
Q 008131 372 HRKWLKITSEALAGTRGRGGTTALDLQIEHDLLSSPKDHLEFTIVRESIRSKLEAVCN--RVVIEPKKAIRKLPRVQHLY 449 (576)
Q Consensus 372 ~~~~~~l~T~aLAGT~~rg~~~~eD~~l~~~Ll~s~Ke~~Eh~~Vvd~i~~~L~~~c~--~v~v~~~~~i~~~~~vqHL~ 449 (576)
+++++.+.|+|||||+|||.| ++|.+++++|++|+||++||.||||++||+|+++|. +|+|++.+.|+++++|+||+
T Consensus 265 ~~~~~~v~t~PiaGT~~Rg~~-~eD~~l~~~Ll~d~Ke~aEh~miVDl~RndL~rvc~~gsV~V~~l~~ve~~~~V~HLv 343 (457)
T 4grh_A 265 SVHAGHAQTRPIAGTRPRFEG-DDDAARIQELVGHPKERAEHVMLIDLERNDLGRICLPGTVVVDELMTVESYAHVHHIV 343 (457)
T ss_dssp EEETTEEECSCSSSSCCEEEC-CC-------------CCCEEEEECCTTCCSGGGTBCTTCCEEEEEEEEEETTEEEEEE
T ss_pred EEECCEEEEEecCCCCCCCCC-HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhcccCCCeEEeccceeEEEcCceEEEE
Confidence 999999999999999999999 999999999999999999999999999999999998 99999999999999999999
Q ss_pred eEEEEEeCCCCCHHHHHHhcCCCCCCCCcChHHHHHHHHHhCCCCCcceeeeEEEEeC-CCceEEEEEeeEEEecCcEEE
Q 008131 450 ARLAGRLRSEDEEYDIMASLHPSPAVCGFPTEEARLLIAETEVFDRGMYAGPVGWFGG-GESEFAVGIRSALVEKGLGAL 528 (576)
Q Consensus 450 t~I~g~L~~~~~~~dll~aLhPtpAV~G~Pk~~A~~~I~~~E~~~RG~YaG~vG~i~~-g~~ef~V~IRsa~i~~~~~~~ 528 (576)
|+|+|+|+++.+.+|+++++||||||||+||.+||++|+++|+++||+|+|+|||++. |++||+|+|||++++++ .++
T Consensus 344 S~V~G~L~~~~~~~d~l~alfP~gsvtGaPK~rAmeiI~elE~~~RG~Y~G~vG~i~~~G~~d~~V~IRt~~~~~~-~~~ 422 (457)
T 4grh_A 344 SNVSGHLRPEVTPGEVIAATFPGGTITGCPKVRCMQIISELEQVPRGAYTGAFGWLNRDGDLDLNILIRTAEVDGH-EVS 422 (457)
T ss_dssp EEEEEEBCTTCCHHHHHHHHCSCSTTSEESHHHHHHHHHHHHCSCCTTTTCEEEEEETTSCEEEEECCSEEEEETT-EEE
T ss_pred eEEEEEECCCCCHHHHHHHhCCCccccCccHHHHHHHHHHhcCCCCcceEEEEEEEecCCCEEEEEEeeEEEEECC-EEE
Confidence 9999999999999999999999999999999999999999999999999999999995 89999999999999975 999
Q ss_pred EEecceecCCCCcchHHHHHHHHHHHHHHhhhc
Q 008131 529 IYAGTGIVEGSNPSLEWDELELKTSQFTKFLKL 561 (576)
Q Consensus 529 l~AGaGIV~~S~p~~Ew~Et~~K~~~ll~~l~~ 561 (576)
+|||||||+||+|+.||+||++|+++|+++|+.
T Consensus 423 ~~AGaGIV~dS~pe~E~~Et~~K~~~ll~al~~ 455 (457)
T 4grh_A 423 FRTGAGIVVDSDPDKELDETRAKARGLLRALGQ 455 (457)
T ss_dssp EEEEEEECTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred EEeeeEEeCCCChHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999864
No 12
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=100.00 E-value=9.8e-64 Score=562.76 Aligned_cols=269 Identities=20% Similarity=0.237 Sum_probs=241.9
Q ss_pred cCCCCCHHHHHHHHHHHH-HHHHcCCCCceeEEecceeEEeec--CCCCHHHHHHHhhhccCCCCc-eecccCCCCCeee
Q 008131 288 NHHSPSKMHWDLAVKKAL-EIINRSSTPLTKVVLARSSRVITA--TDIDPIAWLACLKQVEGENAY-QFCLQPPDAPAFI 363 (576)
Q Consensus 288 ~~~~p~~~~w~~~V~~a~-~~I~~gd~~l~KVVLAR~~~~~~~--~~~dp~~ll~~L~~~~~p~~y-~f~~~~~~~~~fv 363 (576)
....+++++|.+.|++++ ++|++| +++||||+|++.+.++ .++||+++|++|+ ..||++| .|++..+ +..|+
T Consensus 123 ~~~~~~~~~y~~~V~~~i~~~I~~G--d~~kvvLsr~~~~~~~~~~~~~~~~l~~~Lr-~~~p~~y~~~~~~~~-~~~~~ 198 (645)
T 3r75_A 123 RHFDIDDEAYAEIVERVITDEIGTG--AGSNFVIKRTLEGDLDDYSPAKALAVFKRLM-RREVGAYWIFVIHTG-ERTFV 198 (645)
T ss_dssp EEESSCHHHHHHHHHHHHHHTGGGT--SCSEEECCEEEEEECTTCCHHHHHHHHHHHH-HHCCSCSEEEEEECS-SEEEE
T ss_pred CcCCCCHHHHHHHHHHHHHHHHHCC--CeEEEEeeeEEEEEcCCCCCCCHHHHHHHHH-HHCCccceEEEEECC-CCEEE
Confidence 334678999999999997 589999 6999999999888876 3579999999999 9999999 7888865 47999
Q ss_pred ccCccceEEEECCEEEEEecCCCCCCCCChHHhHHHHHHhhcCCCchhhhhhHHHHHHhHHhhccCeeEeCCcceEEEcC
Q 008131 364 GNTPEQLFHRKWLKITSEALAGTRGRGGTTALDLQIEHDLLSSPKDHLEFTIVRESIRSKLEAVCNRVVIEPKKAIRKLP 443 (576)
Q Consensus 364 GaSPE~L~~~~~~~l~T~aLAGT~~rg~~~~eD~~l~~~Ll~s~Ke~~Eh~~Vvd~i~~~L~~~c~~v~v~~~~~i~~~~ 443 (576)
|+|||+|++++++.+.|+|||||++|+.+.++|..+ .+|++|+||++||.||||++||+|+++|....+...+.+++++
T Consensus 199 gaSPE~l~~~~~~~v~t~piaGT~~r~~~~~~~~~~-~~Ll~s~Ke~aEh~mvVDl~rndL~~v~~~g~~v~~p~l~~~~ 277 (645)
T 3r75_A 199 GATPERHLTLHEGCATMNPISGTYRYPQSGPTIDGI-NAFLGDRKESDELYMVLDEELKMMARICPAGGQVTGPHLREMA 277 (645)
T ss_dssp EEESCBCCEEETTEEEECCEEEEEECCTTCCCHHHH-HHHHTCHHHHHHHHHHHHHHHHHHHHHSTTCCEEEEEEEEECS
T ss_pred EeCcchheEEECCEEEEEeCCCCcCCCCCchhHHHH-HHHhhChHHHHHHHHHHHHHHHHHHhhcCCCCCccCceEEEEC
Confidence 999999999999999999999999999887666654 6999999999999999999999999999843333336788999
Q ss_pred CeEEEEeEEEEEeCCCCCHHHHHHhcCCCCCCCCcChHHHHHHHHHhCCCCCcceeeeEEEEeC-C----CceEEEEEee
Q 008131 444 RVQHLYARLAGRLRSEDEEYDIMASLHPSPAVCGFPTEEARLLIAETEVFDRGMYAGPVGWFGG-G----ESEFAVGIRS 518 (576)
Q Consensus 444 ~vqHL~t~I~g~L~~~~~~~dll~aLhPtpAV~G~Pk~~A~~~I~~~E~~~RG~YaG~vG~i~~-g----~~ef~V~IRs 518 (576)
+|+||+|+|+|++. .+.+|+|+++||||||||+||++||++|+++|+++||||+|+|||++. | +.+|+|+|||
T Consensus 278 ~v~Hl~s~v~g~l~--~~~~d~l~al~P~gsvtGaPK~~A~~~I~~lE~~~Rg~Y~G~vG~i~~~g~G~~~~d~~V~IRt 355 (645)
T 3r75_A 278 RLAHTEYFIVGHTE--ADVRDLLRETMFAPTVTGSPIESATRVIARHERAGRGYYSGIAALIGRDARGGRTLDSAILIRT 355 (645)
T ss_dssp SEEEEEEEEEEECC--CCHHHHHHHTCSCGGGSEESHHHHHHHHHHHCCSCCTTTTCEEEEEEECTTSCEEEEEEECCSE
T ss_pred cEEEEEEEEEEEEC--CCHHHHHHHhCCCCccCCCCHHHHHHHHHHhcCCCCcceeEEEEEEecCCCCceeeeeeEEccE
Confidence 99999999999984 579999999999999999999999999999999999999999999994 5 4577999999
Q ss_pred EEEecCcEEEEEecceecCCCCcchHHHHHHHHHHHHHHhhhccc
Q 008131 519 ALVEKGLGALIYAGTGIVEGSNPSLEWDELELKTSQFTKFLKLEV 563 (576)
Q Consensus 519 a~i~~~~~~~l~AGaGIV~~S~p~~Ew~Et~~K~~~ll~~l~~~~ 563 (576)
++++.++.+++|||||||+||+|++||+||++|+++|+++|+..+
T Consensus 356 ~~~~~~~~~~l~aGaGIv~dS~pe~E~~Et~~K~~~~l~al~~~~ 400 (645)
T 3r75_A 356 AEIDRAGHVRIGVGSTLVRHSDAVSEVMETHAKVAALSNAFDPPE 400 (645)
T ss_dssp EEEETTCEEEEEECCEECTTCCHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred EEEccCCEEEEEeccEEeCCCChHHHHHHHHHHHHHHHHHhccCC
Confidence 999543589999999999999999999999999999999998653
Done!