Citrus Sinensis ID: 008131

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570------
MASAAGHCLVRFMDPDSMKSISMCAQPVSSRHSLQKFHHVNITRYQSCSLSMAMMNGCKGDPRLPVDIIDSCTLPAVPSPALALEKLHSAIFGLKSNPPPFTSGIIRLQVPIEEQIQAIDWLHAQHQLLPRCFFSGRSRKKDSDISVVFPNGNGQSSVTHNLVSVAGVGSAVFFRNLHPFSYNDWRSIKRFISTECPMIRAYGAMRFDARANISSEWEDFGSFYFMIPQVEFDELERSSTLAVTLAWDDALSWTWAKAISTLESTMDKVSSKIVRLQKEVSRTFILSNHHSPSKMHWDLAVKKALEIINRSSTPLTKVVLARSSRVITATDIDPIAWLACLKQVEGENAYQFCLQPPDAPAFIGNTPEQLFHRKWLKITSEALAGTRGRGGTTALDLQIEHDLLSSPKDHLEFTIVRESIRSKLEAVCNRVVIEPKKAIRKLPRVQHLYARLAGRLRSEDEEYDIMASLHPSPAVCGFPTEEARLLIAETEVFDRGMYAGPVGWFGGGESEFAVGIRSALVEKGLGALIYAGTGIVEGSNPSLEWDELELKTSQFTKFLKLEVPLRSRFENIGTPN
cccccccccEEEccccccccccccccccccccccCEEEEEEEEEEEEEEEEEEccccccccccccCEEEEcccccccccHHHHHHHHHHHHHHcccccccccccEEEEEEEcccccccccHHccccccccCEEEEcccccccccccccccccccccccccccEEEEEEEEEEEEEccccccHHHHHHHHHHHHccccccEEEEEEcccccccccccccccccEEEEEEEEEEEECccCEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHcccccEEEEEEcccEEECccccccHHHHHHHHHcccccccEEEEEEcccccEEECcccccEEEEEccEEEEEEccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccEEcccccEEEEcccEEEEEccEEEEEcccccHHHHHHHcccccccccccHHHHHHHHHHHcccccccccccEEEECccccEEEEEEEEEEEEcccEEEEEEccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccc
*******CLVRFMDPD*****************LQKFHHVNITRYQSCSLSMAMMNGCKGDPRLPVDIIDSCTLPAVPSPALALEKLHSAIFGLKSNPPPFTSGIIRLQVPIEEQIQAIDWLHAQHQLLPRCFFSGRSRKKDSDISVVFPNGNGQSSVTHNLVSVAGVGSAVFFRNLHPFSYNDWRSIKRFISTECPMIRAYGAMRFDARANISSEWEDFGSFYFMIPQVEFDELERSSTLAVTLAWDDALSWTWAKAISTLESTMDKVSS******************HSPSKMHWDLAVKKALEIINRSSTPLTKVVLARSSRVITATDIDPIAWLACLKQVEGENAYQFCLQPPDAPAFIGNTPEQLFHRKWLKITSEALAGTRGRGGTTALDLQIEHDLLSSPKDHLEFTIVRESIRSKLEAVCNRVVIEPKKAIRKLPRVQHLYARLAGRLRSEDEEYDIMASLHPSPAVCGFPTEEARLLIAETEVFDRGMYAGPVGWFGGGESEFAVGIRSALVEKGLGALIYAGTGIVEGSNPSLEWDELELKTSQFTKFLKLEVPL***********
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MASAAGHCLVRFMDPDSMKSISMCAQPVSSRHSLQKFHHVNITRYQSCSLSMAMMNGCKGDPRLPVDIIDSCTLPAVPSPALALEKLHSAIFGLKSNPPPFTSGIIRLQVPIEEQIQAIDWLHAQHQLLPRCFFSGRSRKKDSDISVVFPNGNGQSSVTHNLVSVAGVGSAVFFRNLHPFSYNDWRSIKRFISTECPMIRAYGAMRFDARANISSEWEDFGSFYFMIPQVEFDELERSSTLAVTLAWDDALSWTWAKAxxxxxxxxxxxxxxxxxxxxxVSRTFILSNHHSPSKMHWDLAVKKALEIINRSSTPLTKVVLARSSRVITATDIDPIAWLACLKQVEGENAYQFCLQPPDAPAFIGNTPEQLFHRKWLKITSEALAGTRGRGGTTALDLQIEHDLLSSPKDHLEFTIVRESIRSKLEAVCNRVVIEPKKAIRKLPRVQHLYARLAGRLRSEDEEYDIMASLHPSPAVCGFPTEEARLLIAETEVFDRGMYAGPVGWFGGGESEFAVGIRSALVEKGLGALIYAGTGIVEGSNPSLEWDELELKTSQFTKFLKLEVPLRSRFENIGTPN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Isochorismate synthase 2, chloroplastic Involved in the synthesis of salicylic acid (SA) required for both local and systemic acquired resistance (LAR and SAR) while SA synthesized through the phenylalanine ammonium lyase (PAL) pathway seems to potentiate plant cell death. Also involved in phylloquinone (vitamin K1) synthesis. Has no isochorismate pyruvate lyase (IPL) activity.probableQ9M9V6
Isochorismate synthase, chloroplastic Involved in the synthesis of o-succinylbenzoic acid and 2,3-dihydroxybenzoic acid. Might be also involved in the synthesis of salicylic acid (SA).probableQ9ZPC0

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
5.-.-.-Isomerases.probable
5.4.-.-Intramolecular transferases (mutases).probable
5.4.4.-Transferring hydroxy groups.probable
5.4.4.2Isochorismate synthase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3GSE, chain A
Confidence level:very confident
Coverage over the Query: 79-137,153-562
View the alignment between query and template
View the model in PyMOL
Template: 4GRH, chain A
Confidence level:very confident
Coverage over the Query: 160-395,409-560
View the alignment between query and template
View the model in PyMOL