Query 008137
Match_columns 576
No_of_seqs 423 out of 1396
Neff 8.5
Searched_HMMs 13730
Date Mon Mar 25 19:01:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008137.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/008137hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pw4a_ f.38.1.1 (A:) Glycerol 100.0 3.3E-37 2.4E-41 325.0 22.7 407 24-542 20-432 (447)
2 d1pv7a_ f.38.1.2 (A:) Lactose 99.9 6.1E-27 4.5E-31 240.8 24.7 387 34-551 12-410 (417)
3 d1pv7a_ f.38.1.2 (A:) Lactose 99.5 1.2E-13 8.4E-18 140.3 15.4 140 69-209 261-402 (417)
4 d1pw4a_ f.38.1.1 (A:) Glycerol 99.2 1.2E-10 8.9E-15 120.0 18.2 164 38-205 258-428 (447)
5 d2fyuk1 f.23.15.1 (K:1-53) Sub 5.3 3.8E+02 0.028 16.9 4.3 39 146-189 3-41 (53)
6 d1u7ga_ f.44.1.1 (A:) Ammonium 4.6 1E+03 0.075 21.0 11.9 49 128-176 283-331 (383)
7 d2dsqg1 g.28.1.1 (G:149-231) I 3.7 2.4E+02 0.017 19.7 2.1 40 388-427 30-72 (83)
8 d2dsrg1 g.28.1.1 (G:151-229) I 3.5 3.1E+02 0.023 18.8 2.6 41 387-427 29-72 (79)
9 d1lxia_ g.17.1.2 (A:) Bone mor 3.4 1.1E+02 0.0077 22.6 -0.2 20 392-411 83-102 (104)
10 d1rmja_ g.28.1.1 (A:) Insulin- 2.6 3.5E+02 0.025 19.8 2.1 39 388-426 54-94 (107)
No 1
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=3.3e-37 Score=325.04 Aligned_cols=407 Identities=14% Similarity=0.097 Sum_probs=296.2
Q ss_pred hhhHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCchHHHHHH
Q 008137 24 TPYIMKLALSAGIGGLLFGYDTGVISGALLYIKEDFRDVEKKTWLQELIVSMAVAGAIFGAGFGGWINDRFGRKISLLGA 103 (576)
Q Consensus 24 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~i~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~ 103 (576)
++++|.++..++++.+..++++..++.+.|.+. |+|.+..+. |++.+++.+++.++++++|+++||+|||+++.++
T Consensus 20 ~~~~w~i~~~~~~~~~~~~~~~~~~~~~~p~~~-~~g~s~~~~---g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~ 95 (447)
T d1pw4a_ 20 RRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLV-EQGFSRGDL---GFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAG 95 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHTT-SSTTCSSCH---HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCcCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHH
Confidence 456888888889999999999999999988775 689999998 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcc----hHHHHHHHHHHHHhhhhhhhhhHHHHHHhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 008137 104 DVLFFIGAIIMAIAP----QPWVIILGRIFVGLGVGMASMTAPLYISEASPAKIRGALVSANGFLITGGQFLAYLINLAF 179 (576)
Q Consensus 104 ~~~~~i~~~~~~~~~----~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~R~~~~~~~~~~~~~G~~l~~~l~~~l 179 (576)
.++.+++.+++++++ +++.+++.|++.|++.|...+....+++|++|+++|++++++.+.+..+|..+++.+++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~ 175 (447)
T d1pw4a_ 96 LILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLG 175 (447)
T ss_dssp HHHHHHHHHHHHHCHHHHSSSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHH
T ss_pred HHHHHHHHhhccccchhhhhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhhcccccccccccccchhhhhhhhhhhhH
Confidence 999999999998874 7889999999999999999999999999999999999999999999999999999998887
Q ss_pred cCCCchhHHHHHHhHHHHHHHHHH-HhhccCChhHHhhcCCHHHHHHHHHHhCCchhhhHHHHHHHHHHHhhhhhhcccc
Q 008137 180 TKAPGTWRWMLGVAGLPAVVQFGL-MMMLPESPRWLYRQNKVDEARAILEKIYPADQVEEEVNLLKQSVENEKAEEGLIG 258 (576)
Q Consensus 180 ~~~~~~Wr~~f~v~~~~~~~~~~~-~~~l~esp~~l~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (576)
....++||+.|++.+++.++..+. +++++|.|+........+...+ ..++. .+ ..+++..
T Consensus 176 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~---~~-----~~~~~~~- 236 (447)
T d1pw4a_ 176 MAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKND----------YPDDY---NE-----KAEQELT- 236 (447)
T ss_dssp HHHTCCSTTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCCSCTTTCCC-------------------------------C-
T ss_pred hhhhhcccccchhhhhhHHHHHHHHHHhcccchhhcccchhhhhhhh----------cccch---hh-----ccccccc-
Confidence 765556999999988887776665 4556666543222111110000 00000 00 0000000
Q ss_pred hhhHHHhhhhcccchhhhhhHHHHHHHHHHHHHhhHHHHhhhHHHHHhhcCCchhHHHHHHHHHhHHHHHHHHHHHHhhc
Q 008137 259 KDMISRLKGAFGNKIVRRGLYAGVTVQVAQQFVGINTVMYYSPTIVQFAGFASKSTALALSLVTSGLNALGSIVSMAFVD 338 (576)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~d 338 (576)
......+..++++. ++......+...........+.|.++++....+....+.......+..+++.++.|++.|
T Consensus 237 -~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 310 (447)
T d1pw4a_ 237 -AKQIFMQYVLPNKL-----LWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSD 310 (447)
T ss_dssp -CTHHHHHHTSSCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -hhhHHHHHHHcCch-----HHHHHHHhhhhhhhhhcchhhhhhhcccccccccchhhhhhhcchhhhhhhhhhhhhhhh
Confidence 00022233333333 333444444445556677778888888877778888888888999999999999999999
Q ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCccccccccCCCCCCCCcccccCCCCcccccccccccccccCCCCC
Q 008137 339 KYGRRRLMIVSMFGLSSCLVALAVVFFQAAIHAPTVSQIESSHFGGNNTCPAYITDGNAKSWNCMDCLKAKCGFCAHKGN 418 (576)
Q Consensus 339 k~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (576)
|++|++..........+..+........
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------------- 338 (447)
T d1pw4a_ 311 KVFRGNRGATGVFFMTLVTIATIVYWMN---------------------------------------------------- 338 (447)
T ss_dssp HTSTTCHHHHHHHHHHHHHHHHHHTTSC----------------------------------------------------
T ss_pred hccccccccccchhHHHHHHHHHHHHhc----------------------------------------------------
Confidence 9998765544443333332222221100
Q ss_pred CCCCCcccccccccccccccccccccccCCCCcchhHHHHHHHHHHHHhcCCcccccchhccccccccccccchhHHHHH
Q 008137 419 EYLPGACLIDEKSTDTLCSDEHRTYFISGCPSSFGWLAVVFLGAYIITYSPGMGTAPWIVNSEIYPLRYRGVGGGIAAVS 498 (576)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~rg~~~g~~~~~ 498 (576)
+....+..++..++.+++. .+..+....+..|.+|++.||++.|+.+..
T Consensus 339 ------------------------------~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 387 (447)
T d1pw4a_ 339 ------------------------------PAGNPTVDMICMIVIGFLI-YGPVMLIGLHALELAPKKAAGTAAGFTGLF 387 (447)
T ss_dssp ------------------------------CTTCHHHHHHHHHHHHHHH-THHHHHHHHHHHHTSCTTHHHHHHHHHHHH
T ss_pred ------------------------------ccccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 1111233333333333332 234455667889999999999999999988
Q ss_pred HHHH-HHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHhhcc
Q 008137 499 NWTS-NLIVSLTFLTLTEALGSAGTFLLFAGFSLLGLVAIYLLVP 542 (576)
Q Consensus 499 ~~~g-~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 542 (576)
++++ .+++|.+.|.+.+..|+...|++.+++++++.++.+++.+
T Consensus 388 ~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 432 (447)
T d1pw4a_ 388 GYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMI 432 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8875 5668899999999999998998888888887776665543
No 2
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}
Probab=99.95 E-value=6.1e-27 Score=240.76 Aligned_cols=387 Identities=10% Similarity=0.017 Sum_probs=254.1
Q ss_pred HHHHHHhhhhhhhhHHHHHHH-HHHhhccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHH
Q 008137 34 AGIGGLLFGYDTGVISGALLY-IKEDFRDVEKKTWLQELIVSMAVAGAIFGAGFGGWINDRFGRKISLLGADVLFFIGAI 112 (576)
Q Consensus 34 ~~l~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~g~i~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~ 112 (576)
+++..++..+......+.+|. +.+++|.+..+. |++.+++.++..++++++|+++||+|||++++++..+..++..
T Consensus 12 l~~~~f~~~~~~~~~~~~l~~~l~~~~g~s~~~~---g~i~s~~~l~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~ 88 (417)
T d1pv7a_ 12 FGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDT---GIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFA 88 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH---HHHHHHHHHHHHHTHHHHHHHHHHHTTCTHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 344556666777778888887 567789999988 9999999999999999999999999999999999999999999
Q ss_pred HHHhcchHHHH----HHHHHHHHhhhhhhhhhHHHHHHhccCc--chhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchh
Q 008137 113 IMAIAPQPWVI----ILGRIFVGLGVGMASMTAPLYISEASPA--KIRGALVSANGFLITGGQFLAYLINLAFTKAPGTW 186 (576)
Q Consensus 113 ~~~~~~~~~~l----~~~R~l~G~~~g~~~~~~~~~i~e~~~~--~~R~~~~~~~~~~~~~G~~l~~~l~~~l~~~~~~W 186 (576)
+.++..+.... ++.+.+.+.+.+...........+..++ +++.+..+........|..+++.+++.+.+. +|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~ 166 (417)
T d1pv7a_ 89 PFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTI--NN 166 (417)
T ss_dssp HHHHHTHHHHHHTTCHHHHHHTTTTGGGGGTTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHH--CH
T ss_pred HHHHhhhhhhHHHHHHHHHHHhhhcccccccchhhcccccccchhhhhHHHHHHHhhhhccccccccccccccccc--cc
Confidence 88887766554 3455555555555555555444444433 3345567778888888999999999988765 35
Q ss_pred HHHHHHhHHHH-HHHHHHHhhccCChhHHhhcCCHHHHHHHHHHhCCchhhhHHHHHHHHHHHhhhhhhcccchhhHHHh
Q 008137 187 RWMLGVAGLPA-VVQFGLMMMLPESPRWLYRQNKVDEARAILEKIYPADQVEEEVNLLKQSVENEKAEEGLIGKDMISRL 265 (576)
Q Consensus 187 r~~f~v~~~~~-~~~~~~~~~l~esp~~l~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (576)
++.+....... +...+.++..+|+++....+ ++.+ ... .+......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---------------------------~~~---~~~~~~~~ 213 (417)
T d1pv7a_ 167 QFVFWLGSGCALILAVLLFFAKTDAPSSATVA---NAVG---------------------------ANH---SAFSLKLA 213 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCCCSCSSSCSS---HHHH---------------------------SCC---CCCCHHHH
T ss_pred cccccchhhHHHHHHHHHHHHhcccccchhhh---hhhh---------------------------hhc---cccccccc
Confidence 55555544444 44444466667665421111 0000 000 00000112
Q ss_pred hhhcccchhhhhhHHHHHHHHHHHHHhhHHHHhhhHHHHHhh---cCCchhHHHHHHHHHhHHHHHHHHHHHHhhcccCC
Q 008137 266 KGAFGNKIVRRGLYAGVTVQVAQQFVGINTVMYYSPTIVQFA---GFASKSTALALSLVTSGLNALGSIVSMAFVDKYGR 342 (576)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dk~gr 342 (576)
.+..+.+..+......... ... ........+.+.... ...+....+.......++..++..+.+++.||.++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~ 288 (417)
T d1pv7a_ 214 LELFRQPKLWFLSLYVIGV-SCT----YDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGG 288 (417)
T ss_dssp HHHTTSSHHHHHHHHHHHH-HHH----HHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHCH
T ss_pred ccccccccccchhhhhHHH-HHH----HHhhhccccccccccccccccchhhhcccccccccccccchhhhhhhhccccc
Confidence 2222222222211111111 111 111112222222211 11234455566677777888999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCccccccccCCCCCCCCcccccCCCCcccccccccccccccCCCCCCCCC
Q 008137 343 RRLMIVSMFGLSSCLVALAVVFFQAAIHAPTVSQIESSHFGGNNTCPAYITDGNAKSWNCMDCLKAKCGFCAHKGNEYLP 422 (576)
Q Consensus 343 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (576)
|+.+..+..+..++.+++....
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------------------- 310 (417)
T d1pv7a_ 289 KNALLLAGTIMSVRIIGSSFAT---------------------------------------------------------- 310 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCC----------------------------------------------------------
T ss_pred ccchhhhHHHHHHhhhcccccc----------------------------------------------------------
Confidence 9999888887777766554321
Q ss_pred CcccccccccccccccccccccccCCCCcchhHHHHHHHHHHHHhcCCcccccchhccccccccccccchhHH-HHHHHH
Q 008137 423 GACLIDEKSTDTLCSDEHRTYFISGCPSSFGWLAVVFLGAYIITYSPGMGTAPWIVNSEIYPLRYRGVGGGIA-AVSNWT 501 (576)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~rg~~~g~~-~~~~~~ 501 (576)
..+..++...+.+.+.+ ...+....+..|.+|++.|+++.|+. +....+
T Consensus 311 -----------------------------~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (417)
T d1pv7a_ 311 -----------------------------SALEVVILKTLHMFEVP-FLLVGCFKYITSQFEVRFSATIYLVCFCFFKQL 360 (417)
T ss_dssp -----------------------------CHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHSCGGGHHHHHHHHHTTTHHH
T ss_pred -----------------------------ccchhhHHHHHHHHHHH-HHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHH
Confidence 12333444444444443 23455667889999999999999985 456779
Q ss_pred HHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHhhccCCCCCCHHH
Q 008137 502 SNLIVSLTFLTLTEALGSAGTFLLFAGFSLLGLVAIYLLVPETKGLAFEE 551 (576)
Q Consensus 502 g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 551 (576)
|..++|.+.|.+.|..|++.+|++.++++++..++.++++++++..+.++
T Consensus 361 g~~i~~~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~r 410 (417)
T d1pv7a_ 361 AMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPGPLSLLR 410 (417)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHSCCSSCTTHHH
T ss_pred HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcCCCccchhH
Confidence 99999999999999999999999999999988888888888777666543
No 3
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}
Probab=99.49 E-value=1.2e-13 Score=140.27 Aligned_cols=140 Identities=15% Similarity=0.100 Sum_probs=126.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhhhhhHHHHHHhc
Q 008137 69 QELIVSMAVAGAIFGAGFGGWINDRFGRKISLLGADVLFFIGAIIMAIAPQPWVIILGRIFVGLGVGMASMTAPLYISEA 148 (576)
Q Consensus 69 ~g~i~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~ 148 (576)
.+...+...++..++..+.+++.||+|+|+.+.++.++.+++.++.++.++.+.+++..++.|++.+...+...+++.|.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 340 (417)
T d1pv7a_ 261 FGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQ 340 (417)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccccccccccccchhhhhhhhcccccccchhhhHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37888889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcchhhHHHHHH-HHHHHHHHHHHHHHHHHhcCCCchhHHHHHHhHHHHHHHHHH-HhhccC
Q 008137 149 SPAKIRGALVSAN-GFLITGGQFLAYLINLAFTKAPGTWRWMLGVAGLPAVVQFGL-MMMLPE 209 (576)
Q Consensus 149 ~~~~~R~~~~~~~-~~~~~~G~~l~~~l~~~l~~~~~~Wr~~f~v~~~~~~~~~~~-~~~l~e 209 (576)
+|+++|+++.++. +....+|..+++.+.|++.+..+ |++.|++.+++.++..++ .+.+++
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~l~~ 402 (417)
T d1pv7a_ 341 FEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIG-FQGAYLVLGLVALGFTLISVFTLSG 402 (417)
T ss_dssp SCGGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred CCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9999999999975 56778999999999999998877 999999988887776665 444443
No 4
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=99.21 E-value=1.2e-10 Score=120.01 Aligned_cols=164 Identities=18% Similarity=0.084 Sum_probs=121.9
Q ss_pred HHhhhhhhhhHHHHHHHH-HHhhccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCchHHHHHHHHHHHH---HHHH
Q 008137 38 GLLFGYDTGVISGALLYI-KEDFRDVEKKTWLQELIVSMAVAGAIFGAGFGGWINDRFGRKISLLGADVLFFI---GAII 113 (576)
Q Consensus 38 ~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~g~i~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~i---~~~~ 113 (576)
.++............|.+ .+.++.+..+. ++..+...++..++.++.|++.||++||+..........+ +.++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (447)
T d1pw4a_ 258 NVFVYLLRYGILDWSPTYLKEVKHFALDKS---SWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIV 334 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHBTTBSCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcchhhhhhhcccccccccchh---hhhhhcchhhhhhhhhhhhhhhhhccccccccccchhHHHHHHHHHH
Confidence 333333334444445554 44567777777 8999999999999999999999999987544333333222 2222
Q ss_pred HHh--cchHHHHHHHHHHHHhhhhhhhhhHHHHHHhccCcchhhHHHHHHHHHHHH-HHHHHHHHHHHhcCCCchhHHHH
Q 008137 114 MAI--APQPWVIILGRIFVGLGVGMASMTAPLYISEASPAKIRGALVSANGFLITG-GQFLAYLINLAFTKAPGTWRWML 190 (576)
Q Consensus 114 ~~~--~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~R~~~~~~~~~~~~~-G~~l~~~l~~~l~~~~~~Wr~~f 190 (576)
... ..+.+...+.-++.|++.++..+....+..|.+|++.|+.+.|+.+....+ |.++++.+.+.+.+..+ |+..|
T Consensus 335 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~~g-~~~~~ 413 (447)
T d1pw4a_ 335 YWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGF 413 (447)
T ss_dssp TTSCCTTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC-SHHHH
T ss_pred HHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHH
Confidence 222 346788888889999999999999999999999999999999999887766 66778999999988887 99999
Q ss_pred HHhHHHHHHHHHHHh
Q 008137 191 GVAGLPAVVQFGLMM 205 (576)
Q Consensus 191 ~v~~~~~~~~~~~~~ 205 (576)
++.+...++..++..
T Consensus 414 ~~~~~~~~~~~~~~~ 428 (447)
T d1pw4a_ 414 MVMIGGSILAVILLI 428 (447)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 888777766655543
No 5
>d2fyuk1 f.23.15.1 (K:1-53) Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) {Cow (Bos taurus) [TaxId: 9913]}
Probab=5.27 E-value=3.8e+02 Score=16.88 Aligned_cols=39 Identities=15% Similarity=-0.020 Sum_probs=23.4
Q ss_pred HhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHH
Q 008137 146 SEASPAKIRGALVSANGFLITGGQFLAYLINLAFTKAPGTWRWM 189 (576)
Q Consensus 146 ~e~~~~~~R~~~~~~~~~~~~~G~~l~~~l~~~l~~~~~~Wr~~ 189 (576)
+...-+++...+..+.-.....|..-+..+. ++. +||..
T Consensus 3 ~k~iG~k~~~ia~~wips~~~~G~a~gl~lv-y~T----DWkli 41 (53)
T d2fyuk1 3 TRFLGPRYRQLARNWVPTASLWGAVGAVGLV-WAT----DWRLI 41 (53)
T ss_dssp GGGCSHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH----TCHHH
T ss_pred hhhhhHHHHHHHHHHhhhhhhhhhhhheeee-eee----hHHHH
Confidence 4455667777777777777777665443332 222 48864
No 6
>d1u7ga_ f.44.1.1 (A:) Ammonium transporter AmtB {Escherichia coli [TaxId: 562]}
Probab=4.55 E-value=1e+03 Score=21.03 Aligned_cols=49 Identities=10% Similarity=0.152 Sum_probs=27.1
Q ss_pred HHHHhhhhhhhhhHHHHHHhccCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 008137 128 IFVGLGVGMASMTAPLYISEASPAKIRGALVSANGFLITGGQFLAYLIN 176 (576)
Q Consensus 128 ~l~G~~~g~~~~~~~~~i~e~~~~~~R~~~~~~~~~~~~~G~~l~~~l~ 176 (576)
++.|+..|........++.+..+-++---+..+.......|.++.++.+
T Consensus 283 ~~iG~i~g~i~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~l~~glfa 331 (383)
T d1u7ga_ 283 LIIGVVAGLAGLWGVTMLKRLLRVDDPCDVFGVHGVCGIVGCIMTGIFA 331 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSCCGGGHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhhccHHHHHHHHHHHhhcccccccceEeehhhhHHHHHHHHHHhc
Confidence 4456555555555555555555444444566776666666655555443
No 7
>d2dsqg1 g.28.1.1 (G:149-231) Insulin-like growth factor-binding protein 1, IGFBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.67 E-value=2.4e+02 Score=19.69 Aligned_cols=40 Identities=23% Similarity=0.488 Sum_probs=28.4
Q ss_pred CCcccccCCCCccccccccccccc--ccCCC-CCCCCCCcccc
Q 008137 388 CPAYITDGNAKSWNCMDCLKAKCG--FCAHK-GNEYLPGACLI 427 (576)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~ 427 (576)
+|-=+.||++...-|..-+...-| ||.++ +|.-.||....
T Consensus 30 iP~C~~dG~y~~~QC~~s~~~~~g~CWCVd~~~G~~i~gt~~~ 72 (83)
T d2dsqg1 30 LPNCNKNGFYHSRQCETSMDGEAGLCWCVYPWNGKRIPGSPEI 72 (83)
T ss_dssp CCCBCTTSSBCSEEECBCC--CCCEEEEBCTTTCCBCTTCCEE
T ss_pred CCCcCCCCCEeeEeeeccCCCCCceEEEEeCCCCEEcCCCcCC
Confidence 455578999999998877666666 78887 57777776543
No 8
>d2dsrg1 g.28.1.1 (G:151-229) Insulin-like growth factor-binding protein 4, IGFBP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.51 E-value=3.1e+02 Score=18.81 Aligned_cols=41 Identities=24% Similarity=0.461 Sum_probs=30.2
Q ss_pred CCCcccccCCCCccccccccccccc--ccCCC-CCCCCCCcccc
Q 008137 387 TCPAYITDGNAKSWNCMDCLKAKCG--FCAHK-GNEYLPGACLI 427 (576)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~ 427 (576)
.+|-=+.||++...-|..-+...-| ||.++ +|+-.||.-..
T Consensus 29 yiP~C~~dG~y~~~QC~~s~~~~~g~CWCVd~~~G~~i~gT~~~ 72 (79)
T d2dsrg1 29 PIPNCDRNGNFHPKQCHPALDGQRGKCWCVDRKTGVKLPGGLEP 72 (79)
T ss_dssp CCCCBCTTSSBCSEEECCCBTTBCCCEEEBCTTTCCBCSSCCBC
T ss_pred cCcCcCCCCCEeeEEeeccCCCCCcEEEEEcCCCCEEcCCCcCC
Confidence 3555678999999988877766666 88885 68777776543
No 9
>d1lxia_ g.17.1.2 (A:) Bone morphogenetic protein-7 (BMP-7) {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.37 E-value=1.1e+02 Score=22.63 Aligned_cols=20 Identities=15% Similarity=0.175 Sum_probs=14.0
Q ss_pred cccCCCCccccccccccccc
Q 008137 392 ITDGNAKSWNCMDCLKAKCG 411 (576)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~ 411 (576)
+.|++-..+.-++|+.++||
T Consensus 83 d~~~~i~~~~~~~Mvv~~Cg 102 (104)
T d1lxia_ 83 DDSSNVILKKYRNMVVRACG 102 (104)
T ss_dssp CTTSCEEEEEEEEEEEEEEE
T ss_pred eCCCcEEEEEcCCcEEEeee
Confidence 45666777777777777776
No 10
>d1rmja_ g.28.1.1 (A:) Insulin-like growth factor binding protein 6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.58 E-value=3.5e+02 Score=19.82 Aligned_cols=39 Identities=21% Similarity=0.402 Sum_probs=28.2
Q ss_pred CCcccccCCCCccccccccccccc--ccCCCCCCCCCCccc
Q 008137 388 CPAYITDGNAKSWNCMDCLKAKCG--FCAHKGNEYLPGACL 426 (576)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 426 (576)
+|-=+.||++..+-|..-...+=| ||..++|.-.||.-.
T Consensus 54 iP~Cd~dG~Y~~~QC~~s~~~~~G~CWCVd~~G~~i~GT~~ 94 (107)
T d1rmja_ 54 VPNCDHRGFYRKRQCRSSQGQRRGPCWCVDRMGKSLPGSPD 94 (107)
T ss_dssp EECCCTTSSCCSEEEEEESSSSCCCEEEBCTTCCBCSSCTT
T ss_pred CcCcCCCCCEeceeCCCCCCCCCceEEeECCCCCCcCCCCC
Confidence 344578999998888776655556 778888887777653
Done!