Query 008139
Match_columns 576
No_of_seqs 271 out of 1526
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 19:03:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008139.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008139hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1u6z_A Exopolyphosphatase; alp 100.0 8E-105 3E-109 874.8 55.5 499 11-561 9-511 (513)
2 3hi0_A Putative exopolyphospha 100.0 3E-101 1E-105 845.0 43.6 487 12-555 14-507 (508)
3 3mdq_A Exopolyphosphatase; str 100.0 4E-69 1.4E-73 557.4 37.4 303 13-332 4-311 (315)
4 3cer_A Possible exopolyphospha 100.0 6.1E-67 2.1E-71 546.2 32.1 311 5-331 8-339 (343)
5 1t6c_A Exopolyphosphatase; alp 100.0 2.1E-65 7.1E-70 529.0 33.9 296 13-331 12-311 (315)
6 3rf0_A Exopolyphosphatase; str 100.0 1.2E-39 3.9E-44 317.6 18.0 198 340-564 3-204 (209)
7 3aap_A Ectonucleoside triphosp 100.0 1.9E-29 6.6E-34 263.7 13.3 154 13-177 3-178 (353)
8 3cj1_A Ectonucleoside triphosp 99.9 1.8E-24 6.1E-29 232.7 13.8 149 13-164 34-211 (456)
9 3zx3_A Ectonucleoside triphosp 99.8 9.3E-20 3.2E-24 194.7 15.1 148 14-164 34-202 (452)
10 3h1q_A Ethanolamine utilizatio 99.7 4.9E-17 1.7E-21 163.7 15.6 153 11-183 26-179 (272)
11 2ych_A Competence protein PILM 98.2 2.2E-05 7.5E-10 82.1 16.7 71 112-183 161-231 (377)
12 4a57_A Nucleoside-triphosphata 98.2 8.5E-06 2.9E-10 87.1 11.9 74 88-161 158-265 (611)
13 4a2a_A Cell division protein F 98.1 4.2E-05 1.5E-09 81.4 17.0 39 144-182 207-245 (419)
14 2pq7_A Predicted HD superfamil 97.5 0.00046 1.6E-08 66.7 11.0 99 359-490 34-136 (220)
15 4gni_A Putative heat shock pro 97.1 0.0048 1.7E-07 64.9 13.8 77 105-182 167-249 (409)
16 3tm8_A BD1817, uncharacterized 96.9 0.0027 9.2E-08 65.2 9.7 102 361-490 169-289 (328)
17 3ccg_A HD superfamily hydrolas 96.9 0.0023 7.9E-08 60.3 8.2 93 361-493 22-137 (190)
18 1k8k_A ARP3, actin-like protei 96.8 0.007 2.4E-07 64.0 12.0 98 82-182 101-204 (418)
19 2o08_A BH1327 protein; putativ 96.7 0.0051 1.7E-07 57.8 9.3 93 361-493 21-135 (188)
20 3b57_A LIN1889 protein; Q92AN1 96.6 0.0074 2.5E-07 57.7 9.6 77 360-455 27-103 (209)
21 2ogi_A Hypothetical protein SA 96.5 0.0069 2.3E-07 57.3 8.3 93 361-493 29-143 (196)
22 2qgs_A Protein Se1688; alpha-h 96.5 0.015 5.2E-07 56.2 10.8 78 360-456 27-104 (225)
23 3dto_A BH2835 protein; all alp 96.4 0.012 4.2E-07 56.9 9.5 78 359-455 26-103 (223)
24 3qfu_A 78 kDa glucose-regulate 96.4 0.03 1E-06 58.3 13.3 108 70-182 136-250 (394)
25 2fxu_A Alpha-actin-1, actin, a 96.4 0.025 8.7E-07 58.8 12.6 93 81-182 93-189 (375)
26 2d0o_A DIOL dehydratase-reacti 96.3 0.0089 3E-07 64.4 8.9 77 103-182 370-446 (610)
27 1nbw_A Glycerol dehydratase re 96.3 0.0094 3.2E-07 64.4 8.8 76 104-182 373-448 (607)
28 2pjq_A Uncharacterized protein 96.3 0.0073 2.5E-07 58.7 7.4 77 360-455 32-108 (231)
29 3djb_A Hydrolase, HD family; a 95.8 0.018 6.2E-07 55.7 7.6 78 359-455 26-103 (223)
30 1jce_A ROD shape-determining p 95.8 0.083 2.8E-06 53.9 13.0 75 103-182 111-186 (344)
31 2v7y_A Chaperone protein DNAK; 95.6 0.2 7E-06 54.2 15.8 108 69-182 91-205 (509)
32 2fsj_A Hypothetical protein TA 94.7 0.045 1.5E-06 56.4 6.8 62 117-181 165-232 (346)
33 2qm1_A Glucokinase; alpha-beta 94.5 0.61 2.1E-05 46.9 14.8 141 4-168 2-159 (326)
34 3gw7_A Uncharacterized protein 94.3 0.013 4.3E-07 57.4 1.5 76 361-455 28-110 (239)
35 4apw_A ALP12; actin-like prote 93.8 0.055 1.9E-06 55.3 5.3 90 88-182 105-213 (329)
36 3i33_A Heat shock-related 70 k 93.7 0.37 1.3E-05 50.2 11.6 110 70-182 141-258 (404)
37 3hc1_A Uncharacterized HDOD do 93.6 0.1 3.5E-06 52.6 6.8 95 361-493 121-245 (305)
38 2q14_A Phosphohydrolase; BT420 93.6 0.1 3.5E-06 54.9 6.9 60 361-430 58-127 (410)
39 3qb0_A Actin-related protein 4 93.5 0.28 9.5E-06 53.0 10.3 151 15-182 25-203 (498)
40 1hux_A Activator of (R)-2-hydr 93.3 0.63 2.2E-05 45.9 11.9 115 14-166 4-119 (270)
41 3sk9_A Putative uncharacterize 92.9 0.13 4.3E-06 51.0 6.1 88 361-458 28-148 (265)
42 3u1n_A SAM domain and HD domai 92.6 0.22 7.5E-06 53.7 7.7 46 361-414 68-113 (528)
43 3js6_A Uncharacterized PARM pr 92.5 0.11 3.8E-06 53.7 5.2 64 117-182 156-225 (355)
44 2hek_A Hypothetical protein; p 92.5 0.24 8.2E-06 51.5 7.7 76 361-453 53-142 (371)
45 1yuw_A Heat shock cognate 71 k 92.5 0.89 3E-05 49.7 12.7 74 107-182 158-237 (554)
46 1zc6_A Probable N-acetylglucos 92.1 2.3 8E-05 42.3 14.4 130 12-166 10-145 (305)
47 4b9q_A Chaperone protein DNAK; 91.7 0.92 3.2E-05 50.2 11.8 110 68-182 116-236 (605)
48 1dkg_D Molecular chaperone DNA 91.6 0.63 2.1E-05 48.0 9.8 74 106-182 153-236 (383)
49 4ehu_A Activator of 2-hydroxyi 91.4 2.2 7.6E-05 41.7 13.2 128 14-180 2-134 (276)
50 3irh_A HD domain protein; phos 91.3 0.25 8.5E-06 52.7 6.3 67 361-430 89-163 (480)
51 3d2f_A Heat shock protein homo 91.1 1.7 6E-05 48.6 13.4 112 68-182 119-241 (675)
52 1k8k_B ARP2, actin-like protei 90.9 0.14 4.8E-06 53.6 4.0 85 90-182 106-193 (394)
53 2zgy_A Plasmid segregation pro 90.7 0.25 8.6E-06 49.9 5.6 96 83-182 90-206 (320)
54 2ews_A Pantothenate kinase; PA 90.6 7.3 0.00025 38.7 16.0 128 11-182 18-148 (287)
55 4fo0_A Actin-related protein 8 88.7 3.3 0.00011 45.3 13.0 110 65-182 170-287 (593)
56 2ch5_A NAGK protein; transfera 88.4 5.3 0.00018 40.2 13.5 140 14-176 7-152 (347)
57 2hoe_A N-acetylglucosamine kin 88.2 8.5 0.00029 39.5 15.1 134 13-167 87-236 (380)
58 3zyy_X Iron-sulfur cluster bin 88.1 0.95 3.3E-05 50.0 8.0 158 16-176 209-402 (631)
59 2kho_A Heat shock protein 70; 88.0 1.8 6.1E-05 47.8 10.3 109 69-182 117-236 (605)
60 2dqb_A Deoxyguanosinetriphosph 87.9 1.1 3.8E-05 46.4 8.0 52 361-430 78-145 (376)
61 1vqr_A Hypothetical protein CJ 87.3 0.91 3.1E-05 45.3 6.8 38 361-415 127-164 (297)
62 3dwl_A Actin-related protein 3 87.3 2.2 7.7E-05 44.9 10.1 100 81-183 116-221 (427)
63 1z05_A Transcriptional regulat 85.9 11 0.00036 39.5 14.5 135 13-167 108-258 (429)
64 3i7a_A Putative metal-dependen 85.4 1.9 6.6E-05 42.5 7.9 98 361-491 120-238 (281)
65 4e1j_A Glycerol kinase; struct 84.9 3.4 0.00012 44.7 10.3 86 4-98 17-105 (520)
66 3vgl_A Glucokinase; ROK family 84.6 6.3 0.00022 39.4 11.5 131 13-167 2-146 (321)
67 4am6_A Actin-like protein ARP8 81.7 5.6 0.00019 43.9 10.2 111 65-182 192-311 (655)
68 1z6r_A MLC protein; transcript 80.8 20 0.00067 37.0 13.8 135 13-167 85-236 (406)
69 3r8e_A Hypothetical sugar kina 80.7 11 0.00038 37.5 11.6 135 13-168 19-169 (321)
70 4db3_A Glcnac kinase, N-acetyl 80.4 12 0.00042 37.4 11.8 134 14-167 25-170 (327)
71 1saz_A Probable butyrate kinas 79.3 7 0.00024 40.3 9.7 143 14-169 3-201 (381)
72 1zbs_A Hypothetical protein PG 79.0 22 0.00076 34.7 13.0 128 15-166 2-132 (291)
73 3ezw_A Glycerol kinase; glycer 79.0 5.1 0.00018 43.2 8.9 79 12-99 3-84 (526)
74 4bc3_A Xylulose kinase; transf 76.5 5.7 0.0002 43.0 8.4 78 13-97 10-99 (538)
75 2pgs_A Putative deoxyguanosine 76.4 2.8 9.6E-05 44.5 5.6 46 361-413 65-113 (451)
76 2yhw_A Bifunctional UDP-N-acet 76.3 23 0.00079 35.4 12.5 134 13-167 30-181 (343)
77 3ljx_A MMOQ response regulator 76.2 6.6 0.00022 38.8 8.1 38 361-415 111-148 (288)
78 3ifr_A Carbohydrate kinase, FG 74.6 8 0.00027 41.5 8.9 77 13-98 7-86 (508)
79 2e2o_A Hexokinase; acetate and 74.4 18 0.00061 35.5 10.8 115 14-154 3-118 (299)
80 3epq_A Putative fructokinase; 73.9 37 0.0013 33.5 13.0 127 13-168 3-148 (302)
81 3hz6_A Xylulokinase; xylulose, 73.9 9 0.00031 41.2 9.0 75 13-97 5-82 (511)
82 3m1t_A Putative phosphohydrola 73.1 6.4 0.00022 38.6 7.0 38 361-416 108-145 (275)
83 3mem_A Putative signal transdu 72.3 13 0.00046 39.2 9.8 64 107-170 57-123 (457)
84 2ap1_A Putative regulator prot 72.1 36 0.0012 33.7 12.6 134 13-168 24-171 (327)
85 3bg2_A DGTP triphosphohydrolas 71.8 2.6 8.8E-05 44.6 3.9 51 361-413 67-120 (444)
86 3g25_A Glycerol kinase; IDP007 71.7 12 0.00042 40.0 9.4 75 13-96 6-83 (501)
87 3h3n_X Glycerol kinase; ATP-bi 71.2 7.8 0.00027 41.6 7.7 75 13-96 5-82 (506)
88 3vov_A Glucokinase, hexokinase 71.1 49 0.0017 32.5 13.2 135 14-168 2-149 (302)
89 2zf5_O Glycerol kinase; hypert 70.5 12 0.0004 40.1 8.9 77 13-98 3-82 (497)
90 3m5f_A Metal dependent phospho 70.1 4.4 0.00015 39.1 4.8 58 398-456 55-127 (244)
91 2p3r_A Glycerol kinase; glycer 69.5 15 0.00051 39.4 9.5 76 13-97 3-81 (510)
92 2gup_A ROK family protein; sug 68.9 31 0.001 33.6 11.0 125 15-168 6-143 (292)
93 2ivn_A O-sialoglycoprotein end 68.8 97 0.0033 30.9 20.0 149 15-181 3-160 (330)
94 2aa4_A Mannac kinase, putative 67.9 7.1 0.00024 38.1 6.1 131 15-168 3-146 (289)
95 3htv_A D-allose kinase, alloki 65.3 30 0.001 34.3 10.2 136 13-168 7-157 (310)
96 1woq_A Inorganic polyphosphate 64.3 1E+02 0.0034 29.4 14.5 141 14-168 13-166 (267)
97 3ll3_A Gluconate kinase; xylul 63.0 20 0.00067 38.4 8.8 73 13-97 4-79 (504)
98 3l0q_A Xylulose kinase; xlylul 61.3 17 0.00059 39.3 8.1 74 13-96 5-82 (554)
99 1vhx_A Putative holliday junct 60.7 6.8 0.00023 34.9 3.9 86 14-122 4-97 (150)
100 2dpn_A Glycerol kinase; thermu 60.1 18 0.00063 38.5 7.9 75 14-97 3-80 (495)
101 2d4w_A Glycerol kinase; alpha 60.1 29 0.001 36.9 9.6 76 14-98 3-81 (504)
102 2ibn_A Inositol oxygenase; red 58.4 4.2 0.00014 39.1 2.1 25 400-424 79-103 (250)
103 3aql_A Poly(A) polymerase; tra 58.2 7.1 0.00024 40.9 4.1 54 400-453 287-351 (415)
104 3kq5_A Hypothetical cytosolic 57.8 7.5 0.00026 40.0 4.0 41 361-415 78-119 (393)
105 3h6e_A Carbohydrate kinase, FG 56.8 14 0.00049 39.3 6.3 24 13-38 6-29 (482)
106 3djc_A Type III pantothenate k 56.4 93 0.0032 30.2 11.7 129 15-166 4-148 (266)
107 1zxo_A Conserved hypothetical 56.4 25 0.00086 34.4 7.7 127 15-167 2-131 (291)
108 2w40_A Glycerol kinase, putati 56.4 23 0.00077 37.8 7.9 78 13-97 4-84 (503)
109 3jvp_A Ribulokinase; PSI-II, N 55.0 18 0.0006 39.5 6.8 78 13-96 5-94 (572)
110 4htl_A Beta-glucoside kinase; 53.9 1.2E+02 0.0041 29.5 12.3 127 15-168 6-148 (297)
111 2e5n_A RNA polymerase II elong 51.4 19 0.00065 29.7 4.7 52 395-449 42-95 (100)
112 3mcp_A Glucokinase; structural 49.0 71 0.0024 32.5 9.9 133 13-167 9-171 (366)
113 2doa_A RNA polymerase II elong 46.9 17 0.00057 30.3 3.7 53 395-450 41-95 (104)
114 2cqz_A 177AA long hypothetical 46.2 22 0.00074 32.4 4.9 42 361-415 35-76 (177)
115 1nu0_A Hypothetical protein YQ 44.3 80 0.0027 27.5 8.0 86 14-123 4-96 (138)
116 3mdq_A Exopolyphosphatase; str 40.7 68 0.0023 31.9 8.0 59 13-74 131-190 (315)
117 3i8b_A Xylulose kinase; strain 38.5 69 0.0024 34.2 8.1 25 13-38 5-29 (515)
118 1miw_A TRNA CCA-adding enzyme; 38.1 22 0.00074 37.0 3.9 43 400-454 248-290 (404)
119 2h3g_X Biosynthetic protein; p 35.6 1.1E+02 0.0038 29.7 8.4 138 14-172 1-152 (268)
120 2uyt_A Rhamnulokinase; rhamnos 32.0 31 0.0011 36.5 4.0 23 11-33 2-24 (489)
121 3cet_A Conserved archaeal prot 30.4 40 0.0014 34.0 4.2 130 15-167 2-151 (334)
122 3djc_A Type III pantothenate k 30.3 49 0.0017 32.2 4.8 29 145-173 4-32 (266)
123 1sz2_A Glucokinase, glucose ki 30.0 2E+02 0.007 28.2 9.6 122 13-156 14-152 (332)
124 1vfg_A A-adding enzyme, poly A 29.9 47 0.0016 34.2 4.8 43 399-453 256-298 (390)
125 1t6c_A Exopolyphosphatase; alp 29.6 66 0.0022 32.0 5.7 60 12-74 137-197 (315)
126 2paq_A 5'-deoxynucleotidase YF 29.4 48 0.0016 30.8 4.4 47 361-419 34-80 (201)
127 4dzo_A Mitotic spindle assembl 28.6 53 0.0018 28.1 4.1 44 103-152 31-74 (123)
128 1u6z_A Exopolyphosphatase; alp 28.6 53 0.0018 35.2 5.1 57 14-73 138-195 (513)
129 3sk3_A Acetate kinase, acetoki 27.8 40 0.0014 35.1 3.8 31 3-33 9-39 (415)
130 2itm_A Xylulose kinase, xylulo 27.3 1.3E+02 0.0045 31.5 8.0 73 15-98 2-77 (484)
131 1bdg_A Hexokinase; phosphotran 25.5 1.6E+02 0.0055 30.8 8.1 61 13-78 68-129 (451)
132 2w6k_A COBE; biosynthetic prot 25.1 1.1E+02 0.0038 26.8 5.7 58 61-127 23-80 (145)
133 1ou5_A TRNA CCA-adding enzyme, 24.9 14 0.00047 39.1 -0.4 41 400-454 306-346 (448)
134 3ce9_A Glycerol dehydrogenase; 24.5 16 0.00053 37.2 -0.1 73 78-155 28-100 (354)
135 3cer_A Possible exopolyphospha 23.7 1E+02 0.0035 31.0 6.0 63 13-75 146-212 (343)
136 1f0j_A PDE4B, phosphodiesteras 23.5 1.6E+02 0.0056 30.0 7.5 42 361-413 86-127 (377)
137 1iv0_A Hypothetical protein; r 22.6 1.4E+02 0.0046 24.3 5.4 83 15-123 3-93 (98)
138 1vlj_A NADH-dependent butanol 21.5 23 0.00078 36.8 0.5 73 78-155 37-113 (407)
139 2jvf_A De novo protein M7; tet 21.4 2.5E+02 0.0085 21.4 6.1 34 532-565 31-64 (96)
140 3eeq_A Putative cobalamin bios 21.0 1.3E+02 0.0043 30.4 5.9 56 60-129 220-275 (336)
141 1zkl_A HCP1, TM22, high-affini 20.2 1.6E+02 0.0056 29.7 6.6 20 394-413 108-127 (353)
No 1
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=100.00 E-value=8.3e-105 Score=874.85 Aligned_cols=499 Identities=24% Similarity=0.376 Sum_probs=445.7
Q ss_pred CCceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEE
Q 008139 11 PQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR 90 (576)
Q Consensus 11 ~~~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~ 90 (576)
+++++|+|||||||+||+|+++. ++.++++++.|++||||+|++.+|.|++++|+|+++||++|+++|++|+|+ +|+
T Consensus 9 ~~~~~AaIDiGSNSirL~I~~~~-~~~~~~l~~~k~~vrLg~g~~~~g~Ls~eai~r~~~~L~~f~~~~~~~~v~--~v~ 85 (513)
T 1u6z_A 9 RPQEFAAVDLGSNSFHMVIARVV-DGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPA--SVC 85 (513)
T ss_dssp ---CEEEEEECSSCEEEEEEEEE-TTEEEEEEEEEECCCTGGGBCTTCCBCHHHHHHHHHHHHHHHHHTTTCCGG--GEE
T ss_pred cCCeEEEEEeccccEEEEEEEEc-CCeeEEEEeeEEEEeccCcccccCCcCHHHHHHHHHHHHHHHHHHHhCCCC--EEE
Confidence 45679999999999999999997 578999999999999999999999999999999999999999999999995 799
Q ss_pred EEeehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEeeCCeEeeEEe
Q 008139 91 AVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCES 170 (576)
Q Consensus 91 ~vATsAvR~A~N~~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~~~S 170 (576)
+|||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++..+ +++++||||||||+++++++++..+.|
T Consensus 86 ~vATsA~R~A~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~-~~lviDIGGGStEl~~~~~~~~~~~~S 164 (513)
T 1u6z_A 86 IVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKG-RKLVIDIGGGSTELVIGENFEPILVES 164 (513)
T ss_dssp EEECHHHHHCTTHHHHHHHHTTTCSSCEEECCHHHHHHHHHHHHHHHSCCCS-CEEEEEECSSCEEEEEEETTEEEEEEE
T ss_pred EEecHHHHcCcCHHHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhccCCC-CEEEEEECCCcEEEEEEeCCeeeEEEE
Confidence 9999999999999999999999999999999999999999999999987533 689999999999999999999999999
Q ss_pred echhHHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHhhhhhHHHHhcCCcEEEeehHHHHHHHHHHHc-CCCCccccCCCC
Q 008139 171 VNLGHVSLSEKFGTCS-GNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVS-GYDRDFVDNVGD 248 (576)
Q Consensus 171 lplG~vrl~e~f~~~~-~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~lvG~gGt~~~la~~~~~-~y~~~~~~~~~~ 248 (576)
+|+||||++++|+.++ ++..++.++++++++.+....+ .++..++..+||+|||+++++++... .|+.
T Consensus 165 l~lG~vrlte~f~~~~~~~~~~~~~~~~~i~~~l~~~~~--~~~~~~~~~lvg~gGt~~~la~i~~~~~~~~-------- 234 (513)
T 1u6z_A 165 RRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLTW--QFRIQGWNVAMGASGTIKAAHEVLMEMGEKD-------- 234 (513)
T ss_dssp ESCCHHHHHHHHSGGGBCCHHHHHHHHHHHHHHHTTTHH--HHHHHCCSEEEEESHHHHHHHHHHHHTTCSS--------
T ss_pred EeccHHHHHHHHcccCCCCHHHHHHHHHHHHHHHHHHHH--HhhhcCCCEEEEEChHHHHHHHHHHhCCCCC--------
Confidence 9999999999998864 6888899999999999976432 33444666799999999999998643 4532
Q ss_pred CCCCccccccCHHHHHHHHHHHHcCCCcHHHHHhhcCCCccchhhHHHHHHHHHHHHHHhCCCeEEECCCchHHHHHHHH
Q 008139 249 FGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVADS 328 (576)
Q Consensus 249 ~~~~~~~~~i~~~~l~~l~~~l~~~~~~~~er~~~~gl~~~Radii~~g~~il~~l~~~~~~~~i~vs~~glReGil~~~ 328 (576)
+ .++.+++.++++++..++.+ ++.+++||+++|+|+|+||++|+.++|+.+++++|+||++|||||+++++
T Consensus 235 ------~-~i~~~~l~~~~~~l~~~~~~--~r~~~~gl~~~Rad~i~~g~~Il~~i~~~~~~~~i~vs~~glreGll~~~ 305 (513)
T 1u6z_A 235 ------G-IITPERLEKLVKEVLRHRNF--ASLSLPGLSEERKTVFVPGLAILCGVFDALAIRELRLSDGALREGVLYEM 305 (513)
T ss_dssp ------S-CBCHHHHHHHHHHHTTCSBG--GGCCCTTCCTTGGGTHHHHHHHHHHHHHHHTCSCBEECSCCHHHHHHHHH
T ss_pred ------C-eecHHHHHHHHHHHHCCCHH--HHHhcCCCChhHHHHHHHHHHHHHHHHHHcCCCEEEECCCcHHHHHHHHH
Confidence 1 59999999999999999998 99999999999999999999999999999999999999999999999999
Q ss_pred HhcccCCCCCCchhhHHHHHHHHHHhCCcccchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHH
Q 008139 329 LAKVFDGYDLNANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLL 408 (576)
Q Consensus 329 l~~~~~~~~~~~~~~~~s~~~l~~ry~~d~~~~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalL 408 (576)
+.+.. ..|++.+|+.++++||++|. .|+++|+++|++|||+|++.|++.. ++++++||+|||+|
T Consensus 306 ~~~~~-----~~d~~~~s~~~l~~ry~~d~--~ha~~V~~~a~~Lf~~l~~~~~l~~---------~~~~~~lL~~Aa~L 369 (513)
T 1u6z_A 306 EGRFR-----HQDVRSRTASSLANQYHIDS--EQARRVLDTTMQMYEQWREQQPKLA---------HPQLEALLRWAAML 369 (513)
T ss_dssp HHHHT-----TCCHHHHHHHHHHHHTTCCH--HHHHHHHHHHHHHHHHHHHHCGGGC---------CHHHHHHHHHHHHH
T ss_pred HHhcc-----cccHHHHHHHHHHHHhCCCH--HHHHHHHHHHHHHHHHHHHhhCcCC---------ChhHHHHHHHHHHH
Confidence 87632 23788999999999999987 8999999999999999999987421 23557999999999
Q ss_pred hhcccccCCCCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCCchhhccCChHHHHHHHHHHHHHHHHHHh
Q 008139 409 HNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVIL 488 (576)
Q Consensus 409 HdIG~~I~~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~ryhrk~~~~~~~~~~~~L~~~~~~~v~kL~~iLRlA~~L 488 (576)
||||++||+++||+||+|||+|++ ++||||+||.+||++++||+++.|+..++.+..|++ +.+++|++|||||++|
T Consensus 370 hdiG~~I~~~~~~~Hs~yii~n~~-l~G~s~~e~~~lA~l~~~h~~~~~~~~~~~~~~l~~---~~v~~L~~iLRlA~~L 445 (513)
T 1u6z_A 370 HEVGLNINHSGLHRHSAYILQNSD-LPGFNQEQQLMMATLVRYHRKAIKLDDLPRFTLFKK---KQFLPLIQLLRLGVLL 445 (513)
T ss_dssp TTTTTTTCSTTHHHHHHHHHHHSC-CTTCCHHHHHHHHHHHHTSSSCCCCTTCCCCSSCCH---HHHHHHHHHHHHHHHT
T ss_pred HHccCcCCccccchhHHHHHhcCC-CCCCCHHHHHHHHHHHHHhCCCCCcchhhhhhccCH---HHHHHHHHHHHHHHHh
Confidence 999999999999999999999998 999999999999999999999999766555678876 2589999999999999
Q ss_pred ccccCCC-Ccc-eEEEEeCceeEEEEeeCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCceEEEEeecCCCc
Q 008139 489 QQNDCVN-LRG-VDFFHSYEGFKLVIKEARDQPYLPGSSQPTLDNIEAELEKELEHFKKIFKQELLVVGSSSSSN 561 (576)
Q Consensus 489 d~s~~~~-i~~-i~~~~~~~~~~L~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~f~~~fg~~l~i~~~~~~~~ 561 (576)
|++|.+. +++ ++++.+++.++|+++.. |..+++ +| .|.+++++++|+++||.++.+...++|..
T Consensus 446 d~~~~~~~i~~~~~~~~~~~~l~l~~~~~------~~~~~~-Le--~~~l~~~~~~~~~~~g~~l~l~~~~~~~~ 511 (513)
T 1u6z_A 446 NNQRQATTTPPTLTLITDDSHWTLRFPHD------WFSQNA-LV--LLDLEKEQEYWEGVAGWRLKIEEESTPEI 511 (513)
T ss_dssp TTTGGGCCCCSCCEEEEETTEEEEEECTT------GGGGCH-HH--HHHHHHHHHHHTTSTTCEEEEEECCCC--
T ss_pred ccccCCCCCCCeeEEEEECCEEEEEEcCc------ccccCc-HH--HHHHHHHHHHHHHHhCCeEEEEECCCccc
Confidence 9999888 999 99999888888887643 333344 55 59999999999999999999998877653
No 2
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=3.1e-101 Score=844.98 Aligned_cols=487 Identities=20% Similarity=0.247 Sum_probs=428.9
Q ss_pred CceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEEE
Q 008139 12 QTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRA 91 (576)
Q Consensus 12 ~~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~ 91 (576)
.+++|+|||||||+||+|+++. ++.++++++.|++||||+|++++|.|++++|+|+++||++|+++|++|+|+ +|++
T Consensus 14 ~~~~AaIDiGSNS~rL~I~~~~-~~~~~~~~~~k~~vrLg~gl~~~g~Ls~eai~r~~~~L~~F~~~~~~~~v~--~v~~ 90 (508)
T 3hi0_A 14 LAPVSVIDIGSNSVRLVVYEGL-SRAPAVLFNEKVLCGLGKGLALTGRMHEEGVTRALMALRRFHVLSEQAQAQ--KLYV 90 (508)
T ss_dssp CCCEEEEEECSSEEEEEEESCS-SSSCCEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCS--EEEE
T ss_pred CCeEEEEEECCccEEEEEEEEc-CCCceEEEEEeEEeecccCccccCCcCHHHHHHHHHHHHHHHHHHHhCCCC--eEEE
Confidence 4679999999999999999986 567899999999999999999999999999999999999999999999995 7999
Q ss_pred EeehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEeeCCeEeeEEee
Q 008139 92 VATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESV 171 (576)
Q Consensus 92 vATsAvR~A~N~~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~~~Sl 171 (576)
|||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.++++. .+++++||||||||+++++++++..++|+
T Consensus 91 vATsA~R~A~N~~~fl~~i~~~tG~~ievIsG~EEA~l~~~gv~~~~~~--~~~lvvDIGGGStEl~~~~~~~~~~~~Sl 168 (508)
T 3hi0_A 91 LATAAAREAENGPDFIREAEAILGCEIEVLSGEKEALYSAYGVISGFYQ--PDGIAGDLGGGSLELIDIKDKSCGEGITL 168 (508)
T ss_dssp EECTHHHHSTTHHHHHHHHHHHHTSCEEECCHHHHHHHHHHHHHHHSSS--CEEEEEEECSSCEEEEEEETTEECCCEEE
T ss_pred EeeHHHHcCcCHHHHHHHHHHHHCCCeEEecHHHHHHHHHHHHHhcCCC--CCeEEEEeCCCceEEEEeeCCeeeeEEEe
Confidence 9999999999999999999999999999999999999999999998874 34799999999999999999999999999
Q ss_pred chhHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHhhhhhHHHHhcCCcEEEeehHHHHHHHHHHH--cCCCCccccCCCCC
Q 008139 172 NLGHVSLSEKFGTCSGNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVV--SGYDRDFVDNVGDF 249 (576)
Q Consensus 172 plG~vrl~e~f~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~lvG~gGt~~~la~~~~--~~y~~~~~~~~~~~ 249 (576)
|+||||+++.+.. ++..+++|+++.+.++ .+++...++..+||+|||+++++++.. ..||.+.+|
T Consensus 169 ~lG~vrl~e~~~~------~~~~~~~~i~~~l~~~--~~~~~~~~~~~~ig~gGt~~~la~i~~~~~~y~~~~~~----- 235 (508)
T 3hi0_A 169 PLGGLRLSEQSDG------SLEKAATIARKHVKSF--AKLLAAGEGRTFYAVGGTWRNIAKLHMEISGYPLHMMQ----- 235 (508)
T ss_dssp SCCHHHHHHHTTT------CHHHHHHHHHHHHHTT--HHHHHTTTTSEEEEESHHHHHHHHHHHHHHTCSCCCCT-----
T ss_pred cceEEehhhcChh------HHHHHHHHHHHHHHHH--HHHHhhcCCCEEEEEehHHHHHHHHHhhccCCCccccc-----
Confidence 9999999998432 4677899999999762 233444556789999999999999753 468765544
Q ss_pred CCCccccccCHHHHHHHHHHHHcCCCcHHHHHhhcCCCccchhhHHHHHHHHHHHHHHhCCCeEEECCCchHHHHHHHHH
Q 008139 250 GGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVADSL 329 (576)
Q Consensus 250 ~~~~~~~~i~~~~l~~l~~~l~~~~~~~~er~~~~gl~~~Radii~~g~~il~~l~~~~~~~~i~vs~~glReGil~~~l 329 (576)
++.|+.+++.++++++..++.+ ++.+++||+++|+|+|+||++|+.++|+.+++++|+||++|||||++++++
T Consensus 236 -----~~~i~~~~l~~~~~~l~~~~~~--~~~~~~gl~~~Radvi~~g~~Il~~i~~~~~~~~i~vs~~glREGll~~~l 308 (508)
T 3hi0_A 236 -----GYELPLEEMLNFLEEVIVSRDS--KDPAWQAVSKNRRSLLPFGAIAMREVLRAMKPAKIAFSAQGVREGYLYSLL 308 (508)
T ss_dssp -----TCEEEHHHHHHHHHHHHTCCC------CCHHHHHCTTCSHHHHHHHHHHHHHHHCCSEEEECSCCHHHHHHHTTS
T ss_pred -----CcEEcHHHHHHHHHHHHcCCHH--HHHhccCCCHhHHHHHHHHHHHHHHHHHHcCcCEEEECCCcHHHHHHHHHh
Confidence 5799999999999999999998 999999999999999999999999999999999999999999999999998
Q ss_pred hcccCCCCCCchhhHHHHHHHHHHhCCcccchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHh
Q 008139 330 AKVFDGYDLNANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLH 409 (576)
Q Consensus 330 ~~~~~~~~~~~~~~~~s~~~l~~ry~~d~~~~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLH 409 (576)
.+... ..|++.+|++++++||++|. .|+++|+++|++|||+++ ++ .++++++||+|||+||
T Consensus 309 ~~~~~----~~d~~~~s~~~l~~ry~~d~--~ha~~V~~~a~~Lf~ql~-~~------------~~~~~~~lL~~Aa~Lh 369 (508)
T 3hi0_A 309 TEAER----ESDPLLVAADELAILRARSP--EHARELADWSGRTFPVFG-ID------------ETEEESRYRQAACLLA 369 (508)
T ss_dssp CHHHH----HSCHHHHHHHHHHHHHCSCH--HHHHHHHHHHHHHGGGGT-CC------------CCHHHHHHHHHHHHHT
T ss_pred hhhcc----ccCHHHHHHHHHHHHhCcCH--HHHHHHHHHHHHHHHhhc-cC------------CChHHHHHHHHHHHHH
Confidence 65321 23778999999999999987 899999999999999997 43 2346789999999999
Q ss_pred hcccccCCCCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCC-CCCC-CchhhccCChHHHHHHHHHHHHHHHHHH
Q 008139 410 NIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKK-FPRS-HHAFLEEFPEQAKQKFRVLCAIVRLSVI 487 (576)
Q Consensus 410 dIG~~I~~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~ryhrk~-~~~~-~~~~~~~L~~~~~~~v~kL~~iLRlA~~ 487 (576)
||||+||+++||+||+|||+|++ ++||||+||.+||++++|+++. .++. .++++..|+++++..+.+|++|||||++
T Consensus 370 diG~~i~~~~~~~Hs~yii~n~~-l~Gfs~~e~~~lA~~~~~r~~~~~~~~~~~~~~~ll~~~~~~~~~~L~~iLRlA~~ 448 (508)
T 3hi0_A 370 DISWRAHPDYRGLQALNIIAHSS-FVAITHPGRAYIALANYYRFEGLNDNGTTEPLAAMAGERLQELGKLLGGLLRVVYL 448 (508)
T ss_dssp TTTTTSCGGGHHHHHHHHHHHBC-CCSCCHHHHHHHHHHHHHHHHCSCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHhCCCchHHHHHHHHHcCC-CCCCCHHHHHHHHHHHHHhcCCCCccchhhHHHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998 9999999999999877555432 3332 2345566889999999999999999999
Q ss_pred hccccCCCCcceEEEEeCc---eeEEEEeeCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCceEEEEe
Q 008139 488 LQQNDCVNLRGVDFFHSYE---GFKLVIKEARDQPYLPGSSQPTLDNIEAELEKELEHFKKIFKQELLVVG 555 (576)
Q Consensus 488 Ld~s~~~~i~~i~~~~~~~---~~~L~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~f~~~fg~~l~i~~ 555 (576)
||+++.+.+++++++++++ .++|+++.. ...+| .|.+++..+.|+++||+++.|++
T Consensus 449 L~~~~~~~i~~~~~~~~~~~~~~l~l~~~~~----------~~~l~--~~~~~~~~~~~~~~~g~~~~~~~ 507 (508)
T 3hi0_A 449 FSASMPGVVDHLKFRKSDNPDIDLEFVVPHD----------YCDFA--GERLDGRLQQLAKLTGKRLAFVF 507 (508)
T ss_dssp HHTTCSSSGGGCEEEECSSTTCSEEEEECGG----------GGGGC--CHHHHHHHHHHHHHHTCCEEEEE
T ss_pred hcCCCcCCCCceEEEECCCCceEEEEEECCC----------cHHHH--HHHHHHHHHHHHHHHCCCeEEEe
Confidence 9999999999999999888 899998653 22233 49999999999999999999986
No 3
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=100.00 E-value=4e-69 Score=557.39 Aligned_cols=303 Identities=26% Similarity=0.462 Sum_probs=280.1
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEEEE
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (576)
+++|+|||||||+||+|+++.+ +.++++++.+++||||+|++.+|.|++++|+|++++|++|+++|++|+|+ ++++|
T Consensus 4 ~~~A~IDiGSNsirL~I~~~~~-~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~~~~~~v~--~v~~v 80 (315)
T 3mdq_A 4 QRIGVIDMGTNTFHLLITDIVN-DRPHTLVNEKSAVGLGKGGITKGFITEEAMDRALDTLKKFRVILDEHAVV--HVIAT 80 (315)
T ss_dssp CEEEEEEECSSEEEEEEEEEET-TEEEEEEEEEEECCSSTTTGGGTCCCHHHHHHHHHHHHHHHHHHHHTTCC--EEEEE
T ss_pred ceEEEEEecCCcEEEEEEEEcC-CceEEeeeceeeeeccccccccCCcCHHHHHHHHHHHHHHHHHHHHcCCC--EEEEE
Confidence 3689999999999999999985 78999999999999999999999999999999999999999999999995 79999
Q ss_pred eehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEeeCCeEeeEEeec
Q 008139 93 ATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVN 172 (576)
Q Consensus 93 ATsAvR~A~N~~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~~~Slp 172 (576)
||||+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++..+++++++||||||||+++++++++..++|+|
T Consensus 81 ATsA~R~A~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~~Sl~ 160 (315)
T 3mdq_A 81 GTSAVRSGSNKQVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNEILWKQSFE 160 (315)
T ss_dssp ECHHHHHCTTHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSCEEEEEEES
T ss_pred eeHHHHcCcCHHHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCeEeeeEEEe
Confidence 99999999999999999999999999999999999999999999988655679999999999999999999999999999
Q ss_pred hhHHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHhhhhhHHHHhcCCcEEEeehHHHHHHHHHHH----cCCCCccccCCC
Q 008139 173 LGHVSLSEKFGTCS-GNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVV----SGYDRDFVDNVG 247 (576)
Q Consensus 173 lG~vrl~e~f~~~~-~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~lvG~gGt~~~la~~~~----~~y~~~~~~~~~ 247 (576)
+|+|||+++|+..+ ++..++..+++|+++.+... ..+++..++..+||+|||+++++++.. ..|+.+.+|
T Consensus 161 lG~vrl~e~f~~~~~~~~~~~~~~~~~i~~~l~~~--~~~~~~~~~~~lig~gGt~~~la~~~~~~~~~~y~~~~~~--- 235 (315)
T 3mdq_A 161 IGGQRLIDRFHVHDPMREDDRVMMHNYFDEVLVPL--EKAINTWRPTQLIGCSGTFDTLAEMNIQHHREKIALEKQT--- 235 (315)
T ss_dssp CCHHHHHHHSCCCSSCCHHHHHHHHHHHHHHTHHH--HHHHHHHCCCEEEEESHHHHHHHHHHHHHHTCCCCGGGCS---
T ss_pred chhhHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH--HHHHhhcCCCEEEEEchHHHHHHHHHHhcccCCCCccccc---
Confidence 99999999998865 68888999999999999764 234455567789999999999999763 457765544
Q ss_pred CCCCCccccccCHHHHHHHHHHHHcCCCcHHHHHhhcCCCccchhhHHHHHHHHHHHHHHhCCCeEEECCCchHHHHHHH
Q 008139 248 DFGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVAD 327 (576)
Q Consensus 248 ~~~~~~~~~~i~~~~l~~l~~~l~~~~~~~~er~~~~gl~~~Radii~~g~~il~~l~~~~~~~~i~vs~~glReGil~~ 327 (576)
++.++.+++++++++|..++.+ +|.+++||+++|+|+|+||++|+.++|+.+++++|+||+.|||||++++
T Consensus 236 -------~~~i~~~~l~~~~~~l~~~~~~--~r~~~~gl~~~Rad~i~~g~~Il~~i~~~~~~~~i~vs~~glreG~l~~ 306 (315)
T 3mdq_A 236 -------SYLLSLPDFNRLRKQLVASTRR--ERLAIAGMIELRADMVVVAICLIEHVLKLVSTNAITVSTYSLKEGVLYT 306 (315)
T ss_dssp -------EEEEEHHHHHHHHHHHHHCCHH--HHHTSTTCCHHHHHHHHHHHHHHHHHHHHSCCSEEEEESCCHHHHHHHH
T ss_pred -------CcEEcHHHHHHHHHHHHcCCHH--HHHhcCCCChhHHHHHHHHHHHHHHHHHHcCcCEEEECCccHHHHHHHH
Confidence 6899999999999999999988 9999999999999999999999999999999999999999999999999
Q ss_pred HHhcc
Q 008139 328 SLAKV 332 (576)
Q Consensus 328 ~l~~~ 332 (576)
++.+.
T Consensus 307 ~~~~~ 311 (315)
T 3mdq_A 307 MLDGV 311 (315)
T ss_dssp HHHTC
T ss_pred Hhhhh
Confidence 98764
No 4
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=100.00 E-value=6.1e-67 Score=546.22 Aligned_cols=311 Identities=27% Similarity=0.364 Sum_probs=275.3
Q ss_pred cccccCCCceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 008139 5 TSYMQIPQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNI 84 (576)
Q Consensus 5 ~~~~~~~~~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v 84 (576)
.+-|...++++|+|||||||+||+|+++.+++.++++++.+++||||+|++.+|.|++++|+|++++|++|+++|++|+|
T Consensus 8 ~~~~~~~~~~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~aL~~f~~~~~~~~v 87 (343)
T 3cer_A 8 HSHMSKESVTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQDVDKTHRFADEALERAYVAAREFAGVIAEHPI 87 (343)
T ss_dssp ------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred ccccCCCCCeEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeCCCCccccCCcCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 34455666789999999999999999998667799999999999999999999999999999999999999999999999
Q ss_pred CcccEEEEeehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCC--CCCceEEEEeCCCceeEEEeeC
Q 008139 85 SRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPV--FDRLVLSVDIGGGSTEFVIGKR 162 (576)
Q Consensus 85 ~~~~i~~vATsAvR~A~N~~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~l~~--~~~~~lviDIGGGStEl~~~~~ 162 (576)
+ +|++|||||+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++. .+.+++++||||||||++++++
T Consensus 88 ~--~v~~vATsA~R~A~N~~~fl~~v~~~tGi~ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~ 165 (343)
T 3cer_A 88 D--GLRFVATSATRDAENREEFEDEIERILGVRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGD 165 (343)
T ss_dssp S--EEEEEECHHHHHCTTHHHHHHHHHHHHSSCCEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCC
T ss_pred C--eEEEEecHHHHcCcCHHHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeec
Confidence 5 79999999999999999999999999999999999999999999999998875 4566999999999999999988
Q ss_pred ------CeEeeEEeechhHHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHhhhhhHHHHhcCCcEEEeehHHHHHHHHHHH
Q 008139 163 ------GKVVFCESVNLGHVSLSEKFGTC-SGNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVV 235 (576)
Q Consensus 163 ------~~~~~~~SlplG~vrl~e~f~~~-~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~lvG~gGt~~~la~~~~ 235 (576)
+++..+.|+|+|++++++.|+.+ +++..++..+++|+++.+..... .++..++..+||+|||+++++++..
T Consensus 166 ~~~~~~~~~~~~~SlplG~v~lt~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~--~~~~~~~~~lvg~gGt~~~la~l~~ 243 (343)
T 3cer_A 166 GVSAPTTQVQGAFSMNIGSVRMTERHLTNDPPTQTQIDEAVADVDEHIDEAFR--TVDAGKARTIIGVSGTVTTMTALAM 243 (343)
T ss_dssp SSSSCTTSCSEEEEESCCHHHHHHHTCCSSSCCHHHHHHHHHHHHHHHHHHHT--TSCGGGCSEEEEESHHHHHHHHHHT
T ss_pred CccCcccccceeEEEehhHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH--hhhhcCCcEEEEEchHHHHHHHHHh
Confidence 55569999999999999999875 46888899999999999976421 1222234579999999999999864
Q ss_pred c--CCCCccccCCCCCCCCccccccCHHHHHHHHHHHHcCCCcHHHHHhhcCCCccchhhHHHHHHHHHHHHHHh-----
Q 008139 236 S--GYDRDFVDNVGDFGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELL----- 308 (576)
Q Consensus 236 ~--~y~~~~~~~~~~~~~~~~~~~i~~~~l~~l~~~l~~~~~~~~er~~~~gl~~~Radii~~g~~il~~l~~~~----- 308 (576)
. .|+.+.+ |++.++.+++.+++++|..++.+ +|.+++||+++|+|+|+||++|+.++|+.+
T Consensus 244 ~~~~y~~~~v----------hg~~l~~~~l~~~~~~l~~~~~~--er~~~~gl~~~Radvi~~g~~Il~~i~~~~~~~~~ 311 (343)
T 3cer_A 244 GLKEYDHTVV----------DGHRLSFEDAYAVDDKFLRMTRA--ERREYKTIHPGRIDVVGGGAVVWSRVLARVSEAAK 311 (343)
T ss_dssp TCSSCCHHHH----------TTCEEEHHHHHHHHHHHHSSCHH--HHHTCTTSCTTTTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccCCcccc----------CCeEEcHHHHHHHHHHHHcCCHH--HHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3 4655444 46789999999999999999988 999999999999999999999999999999
Q ss_pred -----CCCeEEECCCchHHHHHHHHHhc
Q 008139 309 -----GIEEMEVSGYGLGEGVVADSLAK 331 (576)
Q Consensus 309 -----~~~~i~vs~~glReGil~~~l~~ 331 (576)
++++|+||+.|||||++++++.+
T Consensus 312 ~~~~~~~~~i~vs~~glreGll~~~~~~ 339 (343)
T 3cer_A 312 ADHGEAIDSFVASEHGLLDGIVLDYGRR 339 (343)
T ss_dssp HHHSCCCCEEEEESCSHHHHHHHHHHHH
T ss_pred ccccCCCCEEEECCCcHHHHHHHHHHHH
Confidence 99999999999999999998854
No 5
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=100.00 E-value=2.1e-65 Score=529.05 Aligned_cols=296 Identities=31% Similarity=0.425 Sum_probs=271.7
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEEEE
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (576)
.++|+|||||||+||+|+++. ++.++++++.+++||||++++.+|.|++++|+|++++|++|+++|++|+++ ++++|
T Consensus 12 m~~a~IDiGSns~rl~I~~~~-~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~~~~~~v~--~i~~v 88 (315)
T 1t6c_A 12 MRVASIDIGSYSVRLTIAQIK-DGKLSIILERGRITSLGTKVKETGRLQEDRIEETIQVLKEYKKLIDEFKVE--RVKAV 88 (315)
T ss_dssp EEEEEEEECSSEEEEEEEEEE-TTEEEEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCS--EEEEE
T ss_pred cEEEEEEECcCcEEEEEEEEc-CCcEEEEeeeeEEeecCCCccccCCcCHHHHHHHHHHHHHHHHHHHHCCCC--eEEEE
Confidence 379999999999999999997 677999999999999999999999999999999999999999999999995 79999
Q ss_pred eehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEeeCCeEeeEEeec
Q 008139 93 ATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVN 172 (576)
Q Consensus 93 ATsAvR~A~N~~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~~~Slp 172 (576)
||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++ ...+++++||||||||+++++++++..++|+|
T Consensus 89 ATsA~R~A~N~~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~-~~~~~lvvDIGGGStEl~~~~~~~~~~~~Sl~ 167 (315)
T 1t6c_A 89 ATEAIRRAKNAEEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLK-PEGEVCVVDQGGGSTEYVFGKGYKVREVISLP 167 (315)
T ss_dssp ECHHHHTSTTHHHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTC-CCSEEEEEEEETTEEEEEEEETTEEEEEEEEC
T ss_pred EcHHHHcCcCHHHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcc-cCCCEEEEEeCCCcEEEEEEeCCceeeEEEEe
Confidence 99999999999999999999999999999999999999999999887 45568999999999999999999999999999
Q ss_pred hhHHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHhhhhhHHHHhcCCcEEEeehHHHHHHHHHHHc--CCCCccccCCCCC
Q 008139 173 LGHVSLSEKFGTCS-GNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVS--GYDRDFVDNVGDF 249 (576)
Q Consensus 173 lG~vrl~e~f~~~~-~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~lvG~gGt~~~la~~~~~--~y~~~~~~~~~~~ 249 (576)
+|+++++++|+..+ +++.++..+++|+++.+.+. . +.. ..+||+|||+++++++... .|+.+.+
T Consensus 168 ~G~v~l~e~~~~~~~~~~~~~~~~~~~i~~~l~~~--~---~~~--~~lig~gGt~~~la~~~~~~~~y~~~~v------ 234 (315)
T 1t6c_A 168 IGIVNLTETFFKQDPPTEEEVKRFFEFLEKELSKV--K---KPV--DTIVGLGGTITTLAALEYNVYPYDPQKV------ 234 (315)
T ss_dssp CCHHHHHHHHCCSSSCCHHHHHHHHHHHHHHHTTT--C---CCC--SEEEEESHHHHHHHHHHTTCCSCCHHHH------
T ss_pred ccHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH--H---hhc--CEEEEECcHHHHHHHHHhhccCCCcccc------
Confidence 99999999998754 68888999999999998653 1 111 4689999999999998643 5665444
Q ss_pred CCCccccccCHHHHHHHHHHHHcCCCcHHHH-HhhcCCCccchhhHHHHHHHHHHHHHHhCCCeEEECCCchHHHHHHHH
Q 008139 250 GGCKRDWRLSRGELKGIVERLCCGGDGEVER-VRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVADS 328 (576)
Q Consensus 250 ~~~~~~~~i~~~~l~~l~~~l~~~~~~~~er-~~~~gl~~~Radii~~g~~il~~l~~~~~~~~i~vs~~glReGil~~~ 328 (576)
|++.++.+++++++++|..++.+ +| .+++||+++|+|+|+||++|+.++|+.+++++|+||++|||||+++++
T Consensus 235 ----~g~~l~~~~l~~~~~~l~~~~~~--er~~~~~gl~~~Rad~i~~g~~Il~~i~~~~~~~~i~vs~~glreGll~~~ 308 (315)
T 1t6c_A 235 ----HGKVLTYGQIKKWFDTFKEIPSE--ERSKRFRQVEDRRAKVILAGIGIFLKTLEIFEKDCLIVSDWGLREGVLVSE 308 (315)
T ss_dssp ----TTCEEEHHHHHHHHHHHTTSCHH--HHHHHSTTSCGGGTTTHHHHHHHHHHHHHHHTCSEEEEESCCHHHHHHHHH
T ss_pred ----CCeEEcHHHHHHHHHHHHcCCHH--HHHHhcCCCChhHHHHHHHHHHHHHHHHHHcCcCEEEECCCchHHHHHHHH
Confidence 46789999999999999999988 99 999999999999999999999999999999999999999999999998
Q ss_pred Hhc
Q 008139 329 LAK 331 (576)
Q Consensus 329 l~~ 331 (576)
+.+
T Consensus 309 ~~~ 311 (315)
T 1t6c_A 309 VLK 311 (315)
T ss_dssp HHH
T ss_pred Hhh
Confidence 854
No 6
>3rf0_A Exopolyphosphatase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, hydrolase; HET: MSE; 1.80A {Yersinia pestis}
Probab=100.00 E-value=1.2e-39 Score=317.59 Aligned_cols=198 Identities=18% Similarity=0.295 Sum_probs=169.8
Q ss_pred chhhHHHHHHHHHHhCCcccchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchH--HHHHHHHHHhhcccccCC
Q 008139 340 ANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDL--EYLEAACLLHNIGHFTSK 417 (576)
Q Consensus 340 ~~~~~~s~~~l~~ry~~d~~~~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r--~LL~~AalLHdIG~~I~~ 417 (576)
.|++.+|+.++++||++|. .|+++|+++|.+|||++++.|+++ ++++ +||+|||+|||||++||+
T Consensus 3 ~Dir~~sv~~l~~ry~vd~--~ha~~V~~~A~~Lf~~l~~~~~l~-----------~~~~~~~lL~~Aa~LHdIG~~I~~ 69 (209)
T 3rf0_A 3 QDIRQRTAKSLADHYNIDR--EQARRVLETTEQLYTQWLAQNTKL-----------VQPQLEALLKWAAMLHEVGLSINH 69 (209)
T ss_dssp HHHHHHHHHHHHHHHTCCH--HHHHHHHHHHHHHHHHHHHHCGGG-----------CCHHHHHHHHHHHHHTTGGGGTCS
T ss_pred CCHHHHHHHHHHHHhCCCH--HHHHHHHHHHHHHHHHHHHHhCCC-----------hhHHHHHHHHHHHHHHHcccccCc
Confidence 4899999999999999987 899999999999999999988753 4567 999999999999999999
Q ss_pred CCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCCchhhccCChHHHHHHHHHHHHHHHHHHhccccCCCC-
Q 008139 418 KGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQNDCVNL- 496 (576)
Q Consensus 418 ~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~ryhrk~~~~~~~~~~~~L~~~~~~~v~kL~~iLRlA~~Ld~s~~~~i- 496 (576)
++||+||+|||.|++ ++||||+||.+||.+++|||++.|+. .+..+++.++..+.+|+++||||++||+++.+.+
T Consensus 70 ~~~hkHs~Yii~n~~-l~Gfs~~e~~~lA~lv~~hr~~~~~~---~~~~l~~~~~~~~~~L~~iLRLA~~L~~~r~~~~l 145 (209)
T 3rf0_A 70 SGMHRHSAYILQNTN-LPGFNQEQQTLLATLVRMHRKAIKLD---ELPRLNLFKKKYYLPLIQLLRLSTLLNNQRQSTTT 145 (209)
T ss_dssp TTHHHHHHHHHHHSC-CTTCCHHHHHHHHHHHHTSSSCCCGG---GCCCCSSCCHHHHHHHHHHHHHHHHHTTTGGGCCC
T ss_pred ccchHHHHHHHhCCC-CCCCCHHHHHHHHHHHHHhcCCCChh---hhhhcCHHHHHHHHHHHHHHHHHHHHhccccCCCC
Confidence 999999999999998 99999999999999999999998763 2233677788899999999999999999999874
Q ss_pred c-ceEEEEeCceeEEEEeeCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCceEEEEeecCCCcccc
Q 008139 497 R-GVDFFHSYEGFKLVIKEARDQPYLPGSSQPTLDNIEAELEKELEHFKKIFKQELLVVGSSSSSNDRK 564 (576)
Q Consensus 497 ~-~i~~~~~~~~~~L~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~f~~~fg~~l~i~~~~~~~~~~~ 564 (576)
+ +++++++++.++|+++.. |...+|. ..+.++++.++|+++||.++.|. ..+|++-+|
T Consensus 146 ~~~~~l~~~~~~l~L~~~~~------wl~~~pL---~~~~l~~e~~~~~~~~g~~l~i~-~~~~~~~~~ 204 (209)
T 3rf0_A 146 PESLRLITDDSHWTLRFPHG------YLTQNSL---VQLDFEREQAYWDDVVGWKLVIE-EEEPDEAAK 204 (209)
T ss_dssp CSCCEEEEETTEEEEEECTT------HHHHCHH---HHHHHHHHHHHHTTSTTCEEEEE-ECCCC----
T ss_pred CCceEEEEcCCEEEEEeCcc------ccccCHH---HHHHHHHHHHHHHHHhCeeeEEE-ecCcchhhh
Confidence 7 899999999999998543 2223342 25899999999999999999997 445555443
No 7
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=99.96 E-value=1.9e-29 Score=263.72 Aligned_cols=154 Identities=18% Similarity=0.150 Sum_probs=130.0
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEe-----eeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcc
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDT-----LKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRD 87 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~-----~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~ 87 (576)
+.+||||+||||+||.|++..+++.++++++ .+..+||+++... +++++++++ +|++ ++.++++
T Consensus 3 ~~~avID~GSns~Rl~I~~~~~~~~~~~i~~~~~~~~k~~~gLs~~~~~-----~~~~~~~l~---~f~~-~~~~~~~-- 71 (353)
T 3aap_A 3 SCIAVIDAGSTGSRLHIYSYDTDDTNTPIHIEEIWNKKIKPGFASIQPN-----SVTIDAYLT---MLLA-DAPIHNI-- 71 (353)
T ss_dssp EEEEEEEECSSCEEEEEEEEEECTTSCEEEEEEEEEEEESSCGGGSCCS-----HHHHHHHHH---HHHT-TCSCCSE--
T ss_pred CEEEEEEcCCCCeEEEEEEEcCCCCCceeEeeeeeeeccCCChhhcCCC-----HHHHHHHHH---HHHH-HHhcCCC--
Confidence 4689999999999999999986555677776 5667788877653 899998877 8888 8888875
Q ss_pred cEEEEeehhhhhcCC--hHHHHHHHHHHc-------CCcEEEeChHHHHHHHHhhhhccCCC----CCCceEEEEeCCCc
Q 008139 88 HTRAVATAAVRAAEN--KDEFVECVREKV-------GFEVDVLTGEQEAKFVYMGVLQFLPV----FDRLVLSVDIGGGS 154 (576)
Q Consensus 88 ~i~~vATsAvR~A~N--~~~fl~~i~~~t-------G~~i~vIsg~eEA~l~~~gv~~~l~~----~~~~~lviDIGGGS 154 (576)
.|+++||+|+|+|+| +++|+++|+++| |+.|+||||+|||+|+|+||...++. .++..+++||||||
T Consensus 72 ~v~~~ATaa~R~a~n~~~~~~l~~v~~~~~~~~~~~g~~v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGS 151 (353)
T 3aap_A 72 PVYFYATAGMRLLPQSQQKKYYDELEYWFRQQSQWQLVEAKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGAS 151 (353)
T ss_dssp EEEEEECHHHHTSCHHHHHHHHHHHHHHHHTCSSEEEEEEEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSE
T ss_pred cEEEEecHHHhcCcHHHHHHHHHHHHHHHhhCCCCCCCeEEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCc
Confidence 799999999999999 999999999999 99999999999999999999887752 22358999999999
Q ss_pred eeEEEeeC--CeEeeE--EeechhHHH
Q 008139 155 TEFVIGKR--GKVVFC--ESVNLGHVS 177 (576)
Q Consensus 155 tEl~~~~~--~~~~~~--~SlplG~vr 177 (576)
|||+++.+ +++... .|+|+|++.
T Consensus 152 tei~~~~~~~~~~~~~~~~sl~lG~~~ 178 (353)
T 3aap_A 152 VQIVFPMPKNAEISKHNQVELNIYGQN 178 (353)
T ss_dssp EEEEEECCCCTTSCGGGEEEEEETTEE
T ss_pred eEEEEecCCccccCCCceEEEEECCcc
Confidence 99999854 345543 899998854
No 8
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=99.91 E-value=1.8e-24 Score=232.72 Aligned_cols=149 Identities=18% Similarity=0.187 Sum_probs=122.3
Q ss_pred ceEEEEEecccceEEEEEEEeCCC-CEEEEEeeeeeeee-ccCCCcCCCCCHHHHHHHHHHHHHHHHHH---HHCCCCcc
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNG-KFLTIDTLKQPVIL-GRDLSSSCSISTQSQARSVESLLMFRDII---QSHNISRD 87 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~-~~~~l~~~k~~vrL-g~~~~~~g~Ls~e~i~r~~~~L~~f~~~~---~~~~v~~~ 87 (576)
+..+|||+||||+||.|++...+. ....+.+....+++ +.|+...+ ..++++.+.+.+|.+|+... +.++++
T Consensus 34 ~y~~vID~GSns~Rl~Vy~~~~~~~~~~~~~~~~~~~~~~~~Gls~~~-~~pe~~~~~l~~Ll~~a~~~iP~~~~~~t-- 110 (456)
T 3cj1_A 34 KYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQHSSCDVQGGGISSYA-NDPSKAGQSLVRCLEQALRDVPRDRHAST-- 110 (456)
T ss_dssp EEEEEEEECSSCEEEEEEEEETTSTTSTTCCEEEEEEECSSSCGGGGT-TSTHHHHHHTHHHHHHHHHHSCHHHHTTC--
T ss_pred eEEEEEEcCCCCeEEEEEEEcCCCCCCccceeeeeeeeeccccccccc-CCHHHHHHHHHHHHHHHHHhCCHHHcCCc--
Confidence 456799999999999999997431 22223334455677 88887766 67999999999999998754 888886
Q ss_pred cEEEEeehhhhhcC-----ChHHHHHHHHHHcC------CcEEEeChHHHHHHHHhhhhccCCCC-------------CC
Q 008139 88 HTRAVATAAVRAAE-----NKDEFVECVREKVG------FEVDVLTGEQEAKFVYMGVLQFLPVF-------------DR 143 (576)
Q Consensus 88 ~i~~vATsAvR~A~-----N~~~fl~~i~~~tG------~~i~vIsg~eEA~l~~~gv~~~l~~~-------------~~ 143 (576)
.|+++||||+|+|+ |+++|+++|++.+| ..|+||||+|||+|+|+||...+... .+
T Consensus 111 ~v~~~ATAgmR~a~~~~~~n~~~~L~~v~~~l~~~~f~~~~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~~~~~~~~~~ 190 (456)
T 3cj1_A 111 PLYLGATAGMRLLNLTSPEATARVLEAVTQTLTQYPFDFRGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKG 190 (456)
T ss_dssp EEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHTTSSSEEEEEEECCHHHHHHHHHHHHHHHTTTTSCCEETTEECSSCCC
T ss_pred eEEEEeeHHHhhCccccHHHHHHHHHHHHHHHhhCCCCcCceEEcCchHHhhhhHHHHHhhhcccccccccccccccCCC
Confidence 69999999999998 79999999999995 58999999999999999998766421 34
Q ss_pred ceEEEEeCCCceeEEEeeCCe
Q 008139 144 LVLSVDIGGGSTEFVIGKRGK 164 (576)
Q Consensus 144 ~~lviDIGGGStEl~~~~~~~ 164 (576)
..+++|||||||||++..+++
T Consensus 191 t~gvlDlGGgStqi~~~~~~~ 211 (456)
T 3cj1_A 191 TLGAMDLGGASTQITFETTSP 211 (456)
T ss_dssp CCEEEEECSSEEEEEEECCSC
T ss_pred ceEEEEcCCCceEEEeccCCc
Confidence 579999999999999987665
No 9
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=99.81 E-value=9.3e-20 Score=194.68 Aligned_cols=148 Identities=18% Similarity=0.222 Sum_probs=118.1
Q ss_pred eEE-EEEecccceEEEEEEEeCCC-CEEEEEeeeeeeee-ccCCCcCCCCCHHHHHHHHHHHHHHHHHH---HHCCCCcc
Q 008139 14 LFA-SIDMGTSSFKLLIIRAYPNG-KFLTIDTLKQPVIL-GRDLSSSCSISTQSQARSVESLLMFRDII---QSHNISRD 87 (576)
Q Consensus 14 ~~A-vIDIGSNsirL~I~e~~~~~-~~~~l~~~k~~vrL-g~~~~~~g~Ls~e~i~r~~~~L~~f~~~~---~~~~v~~~ 87 (576)
.|| |||+|||++||.||+...+. ....+.+.....++ |.|+...+. .++++.+.++.|.+|+... +.++++
T Consensus 34 ~y~iviDaGSsgtRl~VY~~~~~~~~~~~~~~~~~~~k~~gpGlSs~~~-~p~~~~~~l~~Ll~~a~~~vp~~~~~~t-- 110 (452)
T 3zx3_A 34 KYGIVLDAGSSHTNLYIYKWPAEKENDTGVVQQLEECQVKGPGISKYAQ-KTDEIAAYLAECMKMSTERIPASKQHQT-- 110 (452)
T ss_dssp EEEEEEEECSSCEEEEEEEEECCCTTCCCCCEEEEEEECSSSCGGGGTT-CGGGHHHHHHHHHHHHHHHSCHHHHTTC--
T ss_pred eEEEEEEcCCCCcEEEEEEEeCCcCCCccccceeeeecccCCChhccCC-CHHHHHHHHHHHHHHHHHhCCHHHcCCc--
Confidence 455 89999999999999997421 12222234455677 788877676 8899999999999998864 777875
Q ss_pred cEEEEeehhhhhcC-----ChHHHHHHHHHHc---CC---cEEEeChHHHHHHHHhhhhccCCC----CCCceEEEEeCC
Q 008139 88 HTRAVATAAVRAAE-----NKDEFVECVREKV---GF---EVDVLTGEQEAKFVYMGVLQFLPV----FDRLVLSVDIGG 152 (576)
Q Consensus 88 ~i~~vATsAvR~A~-----N~~~fl~~i~~~t---G~---~i~vIsg~eEA~l~~~gv~~~l~~----~~~~~lviDIGG 152 (576)
.|.++||++||.+. |+++|+++|++.+ |+ .|+||||+|||.|+|+||...+.. ......++||||
T Consensus 111 pi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi~vnyllg~l~~~~~~t~g~lDlGG 190 (452)
T 3zx3_A 111 PVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWITINYLLGRFKTPGGSTFGALDLGG 190 (452)
T ss_dssp EEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHHHHHHHTTTTC---CCCCEEEEECS
T ss_pred cEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHHHHHhhhccccCCCCCceEEEecCC
Confidence 68999999999997 6799999999998 44 899999999999999999765542 124578999999
Q ss_pred CceeEEEeeCCe
Q 008139 153 GSTEFVIGKRGK 164 (576)
Q Consensus 153 GStEl~~~~~~~ 164 (576)
|||||++..++.
T Consensus 191 gStQi~f~~~~~ 202 (452)
T 3zx3_A 191 ASTQITFVPLNS 202 (452)
T ss_dssp SEEEEEECCSSC
T ss_pred CceEEEeccCCC
Confidence 999999876543
No 10
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.72 E-value=4.9e-17 Score=163.71 Aligned_cols=153 Identities=18% Similarity=0.226 Sum_probs=116.7
Q ss_pred CCceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCCcccE
Q 008139 11 PQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSH-NISRDHT 89 (576)
Q Consensus 11 ~~~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~-~v~~~~i 89 (576)
+++++++|||||||+|++|++ .++ +++.....+.+ ....|.+.+ .+++.++|+.|.+.+..+ +.+ ..
T Consensus 26 ~~~~~~gIDiGS~s~k~vi~~--~~~--~~l~~~~~~~~----~l~~g~i~d--~~~~~~~l~~~~~~~~~~~~~~--~~ 93 (272)
T 3h1q_A 26 PPPYKVGVDLGTADIVLVVTD--QEG--IPVAGALKWAS----VVKDGLVVD--YIGAIQIVRELKAKVERLLGSE--LF 93 (272)
T ss_dssp CSCCEEEEECCSSEEEEEEEC--TTC--CEEEEEEEECC----CCBTTBCTT--HHHHHHHHHHHHHHHHHHSSSC--CC
T ss_pred CCCEEEEEEcccceEEEEEEC--CCC--cEEEEEeeccc----ccCCCEEEc--HHHHHHHHHHHHHHHHHhcCCc--cC
Confidence 446799999999999999963 233 33444433322 123344433 467778888887777665 554 34
Q ss_pred EEEeehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEeeCCeEeeEE
Q 008139 90 RAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCE 169 (576)
Q Consensus 90 ~~vATsAvR~A~N~~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~~~ 169 (576)
.+++|...+.+.|+.+++.++.+.+|+++..|+++.||...+.|.. +.+++|||||||+++++.++.+....
T Consensus 94 ~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~--------~~~viDiGggst~~~~~~~g~~~~~~ 165 (272)
T 3h1q_A 94 QAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN--------DGIVVDIGGGTTGIAVIEKGKITATF 165 (272)
T ss_dssp EEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS--------SEEEEEECSSCEEEEEEETTEEEEEC
T ss_pred eEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC--------CEEEEEECCCcEEEEEEECCEEEEEe
Confidence 6678888888999999999999999999999999999998877642 26999999999999999999999999
Q ss_pred eechhHHHHHHhhc
Q 008139 170 SVNLGHVSLSEKFG 183 (576)
Q Consensus 170 SlplG~vrl~e~f~ 183 (576)
|+|+|..++++.+.
T Consensus 166 ~~~~Gg~~~~~~l~ 179 (272)
T 3h1q_A 166 DEPTGGTHLSLVLA 179 (272)
T ss_dssp CBSCCHHHHHHHHH
T ss_pred cCCCcHHHHHHHHH
Confidence 99999999999653
No 11
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=98.23 E-value=2.2e-05 Score=82.07 Aligned_cols=71 Identities=23% Similarity=0.206 Sum_probs=55.0
Q ss_pred HHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEeeCCeEeeEEeechhHHHHHHhhc
Q 008139 112 EKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKFG 183 (576)
Q Consensus 112 ~~tG~~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~~~SlplG~vrl~e~f~ 183 (576)
+..|+++..|.-+--|-....|..... ..+...+++|||||+|.++++.+|.+.++.++|+|.-.+++...
T Consensus 161 ~~aGl~~~~i~~ep~Aaa~~~~~~~~~-~~~~~~~vvDiGggttdi~i~~~g~~~~~~~~~~GG~~i~~~i~ 231 (377)
T 2ych_A 161 RGAGLVPVVLDVKPFAGLYPLEARLAE-EPDRVFLVLDIGAESTSLVLLRGDKPLAVRVLTLSGKDFTEAIA 231 (377)
T ss_dssp HHTTCEEEEEEEHHHHTTGGGHHHHHT-STTCEEEEEEECSSCEEEEEEETTEEEEEEEESCSHHHHHHHHH
T ss_pred HHCCCceEEEecchHHHHHHHHhhccc-ccCCeEEEEEECCCcEEEEEEECCEEEEEEeeechHHHHHHHHH
Confidence 456888888887777766555543221 12234699999999999999999999999999999999988653
No 12
>4a57_A Nucleoside-triphosphatase 1; hydrolase; 2.00A {Toxoplasma gondii} PDB: 4a59_A* 4a5a_A* 4a5b_A 3agr_A
Probab=98.17 E-value=8.5e-06 Score=87.08 Aligned_cols=74 Identities=22% Similarity=0.329 Sum_probs=57.4
Q ss_pred cEEEEeehhhhhcC--ChHHHHHHHHHHcC-------C-------cEEEeChHHHHHHHHhhhhccCCC-----------
Q 008139 88 HTRAVATAAVRAAE--NKDEFVECVREKVG-------F-------EVDVLTGEQEAKFVYMGVLQFLPV----------- 140 (576)
Q Consensus 88 ~i~~vATsAvR~A~--N~~~fl~~i~~~tG-------~-------~i~vIsg~eEA~l~~~gv~~~l~~----------- 140 (576)
.|.+.||+.||.-. -++.+++.++...- + .++||||+||+.|.|+++-.-+..
T Consensus 158 PV~L~ATAGMRLLp~~kqd~IL~aVr~~L~~sp~~~gF~F~~~~~~vrIIsG~EEGvYgWITvNYLLG~f~~~~~~~~~~ 237 (611)
T 4a57_A 158 PVMLCSTAGVRDFHEWYRDALFVLLRHLINNPSPAHGYKFFTNPFWTRPITGAEEGLFAFITLNHLSRRLGEDPARCMID 237 (611)
T ss_dssp EEEEEECTTSTTCCTTHHHHHHHHHHHHHTSCCGGGCCCEECCTTTSEECCHHHHHHHHHHHHHHHTTCCSSSCSEEEEC
T ss_pred cEEEEeeeecccCCHHHHHHHHHHHHHHHhcCCcccCcccccCCCceeecCCccceeeEeeehhhhhccccccccccccc
Confidence 48899999999874 46788888877653 1 289999999999999998643221
Q ss_pred -------CCCceEEEEeCCCceeEEEee
Q 008139 141 -------FDRLVLSVDIGGGSTEFVIGK 161 (576)
Q Consensus 141 -------~~~~~lviDIGGGStEl~~~~ 161 (576)
.....-++|+|||||+|++.-
T Consensus 238 ~~~~~~~~~~TvG~LDLGGASTQIaF~p 265 (611)
T 4a57_A 238 EYGVKQCRNDLAGVVEVGGASAQIVFPL 265 (611)
T ss_dssp TTSCEEEECCCCEEEEECSSCEEEEEEC
T ss_pred cccccCCCCceeEEEeeCCceEEEEecc
Confidence 123468999999999999853
No 13
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=98.15 E-value=4.2e-05 Score=81.45 Aligned_cols=39 Identities=21% Similarity=0.203 Sum_probs=36.4
Q ss_pred ceEEEEeCCCceeEEEeeCCeEeeEEeechhHHHHHHhh
Q 008139 144 LVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKF 182 (576)
Q Consensus 144 ~~lviDIGGGStEl~~~~~~~~~~~~SlplG~vrl~e~f 182 (576)
..+++|||||+|.++++.+|.+.++.++|+|.-.+++..
T Consensus 207 gv~vvDiGggttdisi~~~g~~~~~~~i~~GG~~it~dI 245 (419)
T 4a2a_A 207 GVVVVNLGYNFTGLIAYKNGVPIKISYVPVGMKHVIKDV 245 (419)
T ss_dssp CEEEEEECSSSEEEEEEETTEEEEEEEESCCHHHHHHHH
T ss_pred CEEEEEECCCcEEEEEEECCEEEEEEecccHHHHHHHHH
Confidence 479999999999999999999999999999999998854
No 14
>2pq7_A Predicted HD superfamily hydrolase; 104161995, HD domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.45A {Uncultured thermotogales bacterium} SCOP: a.211.1.1
Probab=97.52 E-value=0.00046 Score=66.74 Aligned_cols=99 Identities=15% Similarity=0.071 Sum_probs=68.8
Q ss_pred cchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccC---CCCchhhhHHHHHc-CCCC
Q 008139 359 RVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTS---KKGYHKQSCHIIMN-GDHL 434 (576)
Q Consensus 359 ~~~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~~I~---~~~h~~Hs~yiI~n-s~~l 434 (576)
+..|..+|+.+|..|..... . +..++.+||+|||||+..+ ...|...|+.++.+ .. -
T Consensus 34 ~~~H~~rV~~~a~~la~~~~----~--------------d~~~l~~AaLLHDIg~~~~~~~~~~H~~~ga~~a~~~L~-~ 94 (220)
T 2pq7_A 34 DISHTFRVMENASEIASREK----C--------------DLQKAIIAALLHDIKRPHEALTGVDHAESGAEYASGLLP-T 94 (220)
T ss_dssp SHHHHHHHHHHHHHHHHHHT----C--------------CHHHHHHHHHHTTTTHHHHHHHCCCHHHHHHHHHHHHGG-G
T ss_pred hHHHHHHHHHHHHHHHHHcC----C--------------CHHHHHHHHHHHcCCCcccCCCcCCHHHHHHHHHHHHHH-H
Confidence 34799999999998865442 1 2468999999999998654 34556678887754 22 3
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCCCCchhhccCChHHHHHHHHHHHHHHHHHHhcc
Q 008139 435 YGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQ 490 (576)
Q Consensus 435 ~G~s~~E~~~iA~i~ryhrk~~~~~~~~~~~~L~~~~~~~v~kL~~iLRlA~~Ld~ 490 (576)
.||+..+...++.++++|...... ... ...+.|++.|+.||.
T Consensus 95 ~~~~~~~i~~v~~~I~~H~~~~~~------~~~--------~~~a~Iv~dAD~Lda 136 (220)
T 2pq7_A 95 MGFDISFVAEVSKAIRSHRYSGGL------TPT--------SLTGKILQDADRLDA 136 (220)
T ss_dssp GTCCHHHHHHHHHHHHHCC-----------CCC--------SHHHHHHHHHHHGGG
T ss_pred CCCCHHHHHHHHHHHHHcCcccCC------CCC--------CHHHHHHHHhhHHhh
Confidence 689999999999999999743211 111 135678888888874
No 15
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=97.08 E-value=0.0048 Score=64.94 Aligned_cols=77 Identities=13% Similarity=0.285 Sum_probs=47.4
Q ss_pred HHHHHHHHHcCCcE-EEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEe--eCCeEe---eEEeechhHHHH
Q 008139 105 EFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIG--KRGKVV---FCESVNLGHVSL 178 (576)
Q Consensus 105 ~fl~~i~~~tG~~i-~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~--~~~~~~---~~~SlplG~vrl 178 (576)
..+..+-+..|+++ .+++..+-|-+.| +........+...+|+|+|||+|.++++ .++.+. .....++|.-.+
T Consensus 167 ~~~~~a~~~AGl~~~~li~Ep~AAa~~~-~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~ 245 (409)
T 4gni_A 167 AALIAAAAAADLEVLQLISEPAAAVLAY-DARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIAL 245 (409)
T ss_dssp HHHHHHHHHTTCEEEEEEEHHHHHHHHT-TC------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHH
T ss_pred HHHHHHHHHcCCCeEEEEcCHHHHHHHH-hcccccCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHH
Confidence 34555556679996 5666655555544 3332111123458999999999999985 455433 224589999888
Q ss_pred HHhh
Q 008139 179 SEKF 182 (576)
Q Consensus 179 ~e~f 182 (576)
.+.+
T Consensus 246 d~~i 249 (409)
T 4gni_A 246 DKVL 249 (409)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7754
No 16
>3tm8_A BD1817, uncharacterized protein; HD-GYP, phosphodiesterase, unknown function, hydrolase,signa protein; 1.28A {Bdellovibrio bacteriovorus} PDB: 3tmb_A 3tmc_A 3tmd_A
Probab=96.91 E-value=0.0027 Score=65.19 Aligned_cols=102 Identities=14% Similarity=0.230 Sum_probs=65.7
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHH-HHHHHHHhhcccccCCC------------------Cch
Q 008139 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEY-LEAACLLHNIGHFTSKK------------------GYH 421 (576)
Q Consensus 361 ~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~L-L~~AalLHdIG~~I~~~------------------~h~ 421 (576)
.|+.+|+.+|..|-..+ |+ ++.+... |..||+|||||+..-+. .|.
T Consensus 169 ~Hs~~Va~la~~la~~l----gl-----------~~~~~~~~l~~aaLLHDIGk~~ip~~il~k~~~L~~~E~~~~~~H~ 233 (328)
T 3tm8_A 169 HHGVTVSTLSIALAQKL----GI-----------TDPKKTQLLTLGALLHDYGHHHSPLNLNQPLDSMSPEDLALWKKHP 233 (328)
T ss_dssp HHHHHHHHHHHHHHHHH----TC-----------CCHHHHHHHHHHHHHTTGGGTTCSCCCSSCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHc----Cc-----------CHHHHHHHHHHHHHHhcCCcccCCHHHHhCCCCCCHHHHHHHHHHH
Confidence 79999999999865443 43 3345566 99999999999884332 378
Q ss_pred hhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCCchhhccCChHHHHHHHHHHHHHHHHHHhcc
Q 008139 422 KQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQ 490 (576)
Q Consensus 422 ~Hs~yiI~ns~~l~G~s~~E~~~iA~i~ryhrk~~~~~~~~~~~~L~~~~~~~v~kL~~iLRlA~~Ld~ 490 (576)
..++.+++.. .|++ ..++.++++|.......- ...|..++ +-.++.|+.+|+.+|.
T Consensus 234 ~~G~~~ll~~---~~~~----~~v~~~i~~HHEr~dGsG---P~gl~g~~---I~~~arIv~vaD~~da 289 (328)
T 3tm8_A 234 IEGAQKVQDK---KHFD----QTVINIIGQHEETINGTG---PKGLREKD---MDPLAVLVSSANAMDR 289 (328)
T ss_dssp HHHHHHHTTC---TTSC----HHHHHHHHHTTCCTBSCS---TTCCBGGG---SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh---CCCc----HHHHHHHHHhcCCCCCCC---CCCCCccc---CCHHHHHHHHHHHHHH
Confidence 8888855444 3455 456677778864333211 12233322 3346778888887764
No 17
>3ccg_A HD superfamily hydrolase; NP_347894.1, HD domain, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.50A {Clostridium acetobutylicum atcc 824}
Probab=96.88 E-value=0.0023 Score=60.29 Aligned_cols=93 Identities=13% Similarity=0.091 Sum_probs=62.0
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCC-----------------------
Q 008139 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSK----------------------- 417 (576)
Q Consensus 361 ~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~~I~~----------------------- 417 (576)
.|+..|+.+|..| ...+|+ ++ ..+..|++|||||+...+
T Consensus 22 ~Hs~~Va~~A~~l----A~~~g~-----------d~---~~~~~AgLLHDiGk~~~~~~il~~~~~~~~~l~~~E~~~~~ 83 (190)
T 3ccg_A 22 KHSLGVMDTAVRL----AGIYNE-----------DT---EKARIAGLVHDCAKKLPGEKIIEICTNEGYELGDEDIRNSY 83 (190)
T ss_dssp HHHHHHHHHHHHH----HHHHTC-----------CH---HHHHHHHHHTTTTTTSCHHHHHHHHHHTTCCCCHHHHTTTT
T ss_pred HHHHHHHHHHHHH----HHHHCc-----------CH---HHHHHHHHHHHhcCCCCHHHHHHHHHHcCCCCCHHHHhHHH
Confidence 7999999999975 344443 21 358899999999987541
Q ss_pred CCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCCchhhccCChHHHHHHHHHHHHHHHHHHhccccC
Q 008139 418 KGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQNDC 493 (576)
Q Consensus 418 ~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~ryhrk~~~~~~~~~~~~L~~~~~~~v~kL~~iLRlA~~Ld~s~~ 493 (576)
..|...+++++.+. .|+++++ ++..+++|....|. . ..++.|+.+|+.++..|.
T Consensus 84 ~~H~~~Ga~il~~~---~~~~~~~---i~~aI~~Hh~g~~~--------~--------~~~~~Iv~vAD~i~~~R~ 137 (190)
T 3ccg_A 84 LLHGLAGRILAKKV---IGIDDED---VLNAIEFHTTGRPN--------M--------SLLEKIIYIADYIEPGRE 137 (190)
T ss_dssp C-CHHHHHHHHHHT---TCCCCHH---HHHHHHTTTTCCSS--------C--------CHHHHHHHHHHHHSTTCC
T ss_pred cchHHHHHHHHHHh---cCCCcHH---HHHHHHHhcCCCCC--------C--------CHHHHHHHHHHhCCCCCC
Confidence 34777788887662 4664433 45566777643221 1 136789999999876654
No 18
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=96.79 E-value=0.007 Score=63.97 Aligned_cols=98 Identities=12% Similarity=0.059 Sum_probs=62.4
Q ss_pred CCCCcccEEEEeeh-hhhhcCChHHHHHHHHHHcCCcEE-EeChHHHHHHHHhhhh--ccCCCCCCceEEEEeCCCceeE
Q 008139 82 HNISRDHTRAVATA-AVRAAENKDEFVECVREKVGFEVD-VLTGEQEAKFVYMGVL--QFLPVFDRLVLSVDIGGGSTEF 157 (576)
Q Consensus 82 ~~v~~~~i~~vATs-AvR~A~N~~~fl~~i~~~tG~~i~-vIsg~eEA~l~~~gv~--~~l~~~~~~~lviDIGGGStEl 157 (576)
.++++....+|-|. +.-...+++...+.+.+..|++.- ++....=| .+++. ..++..+..++|+|+|||.|.+
T Consensus 101 L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa---~~a~~~~~~~~~~~~~glVvDiG~gtt~v 177 (418)
T 1k8k_A 101 LRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLA---LAASWTSRQVGERTLTGTVIDSGDGVTHV 177 (418)
T ss_dssp TCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHH---HHHGGGSTTCCSCCCCEEEEEESSSCEEE
T ss_pred cCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHH---hhhhhcccccCCCCCeEEEEEcCCCceEE
Confidence 45554333445453 333334556666666678899854 44433333 33321 1222122368999999999999
Q ss_pred EEeeCCeEeeE--EeechhHHHHHHhh
Q 008139 158 VIGKRGKVVFC--ESVNLGHVSLSEKF 182 (576)
Q Consensus 158 ~~~~~~~~~~~--~SlplG~vrl~e~f 182 (576)
+.+.+|.+... ..+++|.-.+++.+
T Consensus 178 ~~v~~G~~~~~~~~~~~lGG~~lt~~l 204 (418)
T 1k8k_A 178 IPVAEGYVIGSCIKHIPIAGRDITYFI 204 (418)
T ss_dssp EEEETTEECGGGCEEESCSHHHHHHHH
T ss_pred EEeECCEEcccceEEEeCcHHHHHHHH
Confidence 99999988876 88999998888754
No 19
>2o08_A BH1327 protein; putative HD superfamily hydrolase, structural genomics, JOIN for structural genomics, JCSG; HET: UNL PG4 DGI; 1.90A {Bacillus halodurans}
Probab=96.74 E-value=0.0051 Score=57.82 Aligned_cols=93 Identities=17% Similarity=0.222 Sum_probs=61.6
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccC----------------------CC
Q 008139 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTS----------------------KK 418 (576)
Q Consensus 361 ~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~~I~----------------------~~ 418 (576)
.|+..|+.+|..| ....|+ ++ ..+..|++|||||+... ..
T Consensus 21 ~Hs~~Va~~A~~l----A~~~g~-----------~~---~~~~~agLLHDIGk~~~~~~il~~~~~~~~~l~~~e~~~~~ 82 (188)
T 2o08_A 21 QHTIGVMETAIDL----AKLYGA-----------DQ---QKAELAAIFHDYAKFRDKNEMRTLIREKLSQQDILFYGDEL 82 (188)
T ss_dssp HHHHHHHHHHHHH----HHHHTC-----------CH---HHHHHHHHHTTTTTTSCHHHHHHHHHHHCSCCGGGGSCGGG
T ss_pred HHHHHHHHHHHHH----HHHHCc-----------CH---HHHHHHHHHHHHcCCCCHHHHHHHHHhcCCCCCHHHHHHHh
Confidence 7999999999975 444443 21 35889999999999832 13
Q ss_pred CchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCCchhhccCChHHHHHHHHHHHHHHHHHHhccccC
Q 008139 419 GYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQNDC 493 (576)
Q Consensus 419 ~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~ryhrk~~~~~~~~~~~~L~~~~~~~v~kL~~iLRlA~~Ld~s~~ 493 (576)
.|...+++++... .|+++++ +...+++|....|. . ..++.|+.+|+.++..|.
T Consensus 83 ~H~~~G~~il~~~---~~~~~~~---i~~aI~~Hh~g~~~--------~--------~~~~~Iv~vAD~i~~~r~ 135 (188)
T 2o08_A 83 LHAPCGAYYVREE---VGIEDED---VLQAIRFHTTGRPN--------M--------SLLEKIIFLADYIEPNRQ 135 (188)
T ss_dssp SHHHHHHHHHHHH---HCCCCHH---HHHHHHTTTTCCTT--------C--------CHHHHHHHHHHHHSTTCC
T ss_pred hHHHHHHHHHHHc---cCCChHH---HHHHHHHhccCCCC--------C--------CHHHHhhhhhccCCCCCC
Confidence 5777788877652 3554433 44566677642221 1 136889999999876664
No 20
>3b57_A LIN1889 protein; Q92AN1, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 3.00A {Listeria innocua CLIP11262} SCOP: a.211.1.1
Probab=96.61 E-value=0.0074 Score=57.70 Aligned_cols=77 Identities=17% Similarity=0.123 Sum_probs=48.7
Q ss_pred chhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCCH
Q 008139 360 VKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYST 439 (576)
Q Consensus 360 ~~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~~I~~~~h~~Hs~yiI~ns~~l~G~s~ 439 (576)
..|..+|.++|..|-... + .+..++.+||+|||||......+ +..|+.++..--.=.|++.
T Consensus 27 ~~H~~rV~~~a~~ia~~~----~--------------~d~~~v~~AAlLHDig~~~~~~~-~~~~a~~a~~~L~~~g~~~ 87 (209)
T 3b57_A 27 WSHIKRVWKLSKEIQSKE----G--------------GDLFTIELAALFHDYSDIKLTTD-EQEATKTLINWMETKEIPS 87 (209)
T ss_dssp HHHHHHHHHHHHHHHHHH----C--------------SCHHHHHHHHHHTTCCC--------CHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHHHHHHHHHHHc----C--------------CCHHHHHHHHHHhccCcccCCCc-hHHHHHHHHHHHHHCCCCH
Confidence 379999999999874322 2 13478999999999998754443 2234444332100158999
Q ss_pred HHHHHHHHHHHhccCC
Q 008139 440 DEIKLIALLTRFHRKK 455 (576)
Q Consensus 440 ~E~~~iA~i~ryhrk~ 455 (576)
++...|..++..|+.+
T Consensus 88 ~~~~~V~~~I~~Hs~~ 103 (209)
T 3b57_A 88 ELIKKIIRIIQSVSFK 103 (209)
T ss_dssp HHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHcCcc
Confidence 9999999999988644
No 21
>2ogi_A Hypothetical protein SAG1661; structural genomics, joint center for structural genomics, J protein structure initiative; HET: GDP MES; 1.85A {Streptococcus agalactiae serogroup V}
Probab=96.48 E-value=0.0069 Score=57.34 Aligned_cols=93 Identities=15% Similarity=0.046 Sum_probs=61.4
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCC----------------------C
Q 008139 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSK----------------------K 418 (576)
Q Consensus 361 ~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~~I~~----------------------~ 418 (576)
.|+..|+.+|..| ....|+ ++ ..+..|++|||||+...+ .
T Consensus 29 ~Hs~~Va~~A~~l----A~~~g~-----------d~---~~~~~AgLLHDIGK~~~~~~il~~~~~~~~~l~~~E~~~~~ 90 (196)
T 2ogi_A 29 NHVLGVERAAIEL----AERYGY-----------DK---EKAGLAALLHDYAKELSDDEFLRLIDKYQPDPDLKKWGNNI 90 (196)
T ss_dssp HHHHHHHHHHHHH----HHHHTC-----------CH---HHHHHHHHHTTTTTTCCHHHHHHHHHHHCCCTGGGGSCHHH
T ss_pred HHHHHHHHHHHHH----HHHHCc-----------CH---HHHHHHHHHHHcCCcCCHHHHHHHHHhcCCCCCHHHHHHHh
Confidence 7999999999975 344443 21 358899999999998431 2
Q ss_pred CchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCCchhhccCChHHHHHHHHHHHHHHHHHHhccccC
Q 008139 419 GYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQNDC 493 (576)
Q Consensus 419 ~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~ryhrk~~~~~~~~~~~~L~~~~~~~v~kL~~iLRlA~~Ld~s~~ 493 (576)
.|...+++++... .|+++++ ++..+++|....| .. ..++.|+.+|+.++..|.
T Consensus 91 ~H~~~G~~ll~~~---~~~~~~~---i~~aI~~Hh~g~~--------~~--------~~~~~Iv~vAD~i~~~R~ 143 (196)
T 2ogi_A 91 WHGLVGIYKIQED---LAIKDQD---ILAAIAKHTVGSA--------QM--------STLDKIVYVADYIEHNRD 143 (196)
T ss_dssp HHHHTHHHHHHHH---SCCCCHH---HHHHHHTTTTCCS--------SC--------CHHHHHHHHHHHHCTTCC
T ss_pred ccHHHHHHHHHHc---cCCCcHH---HHHHHHHhcCCCC--------CC--------CHHHHhhhhheecCCCCC
Confidence 3666777777652 4564433 4556677764222 11 136889999999876654
No 22
>2qgs_A Protein Se1688; alpha-helical protein, structural genomics, PSI-2, protein S initiative, northeast structural genomics consortium; 2.00A {Staphylococcus epidermidis} SCOP: a.211.1.1
Probab=96.45 E-value=0.015 Score=56.22 Aligned_cols=78 Identities=10% Similarity=-0.000 Sum_probs=50.0
Q ss_pred chhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCCH
Q 008139 360 VKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYST 439 (576)
Q Consensus 360 ~~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~~I~~~~h~~Hs~yiI~ns~~l~G~s~ 439 (576)
..|..+|.++|..|. ....+. +..++.+||+|||||..... +...|..+...--.=.|++.
T Consensus 27 ~~H~~rV~~~a~~i~---a~~~~~--------------d~~~l~lAAlLHDigk~~~~--~~~~ga~~a~~~L~~~g~~~ 87 (225)
T 2qgs_A 27 IAHVERVYNNACYIA---KRENIT--------------DTLVIELSSLLHDTVDSKLT--DEILAYDQLKQFLSTLDLSS 87 (225)
T ss_dssp HHHHHHHHHHHHHHH---HHTTCS--------------CCHHHHHHHHHTTTTCCSSS--CHHHHHHHHHHHHHTTTCCH
T ss_pred HHHHHHHHHHHHHHH---hhccCC--------------CHHHHHHHHHHHcCCCCCCC--cHHHHHHHHHHHHHHCCCCH
Confidence 379999999998762 222221 23689999999999984322 34444433322100258999
Q ss_pred HHHHHHHHHHHhccCCC
Q 008139 440 DEIKLIALLTRFHRKKF 456 (576)
Q Consensus 440 ~E~~~iA~i~ryhrk~~ 456 (576)
++...|..++++|+...
T Consensus 88 ~~i~~V~~~I~~Hs~~~ 104 (225)
T 2qgs_A 88 EISQQVLYIIKHMSYRA 104 (225)
T ss_dssp HHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHcCccc
Confidence 99999999999886443
No 23
>3dto_A BH2835 protein; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Bacillus halodurans} SCOP: a.211.1.1
Probab=96.38 E-value=0.012 Score=56.88 Aligned_cols=78 Identities=15% Similarity=0.028 Sum_probs=49.2
Q ss_pred cchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCC
Q 008139 359 RVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYS 438 (576)
Q Consensus 359 ~~~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~~I~~~~h~~Hs~yiI~ns~~l~G~s 438 (576)
+..|..+|.++|..|-... + .+..++.+||+|||||..- +.+|..-++-++..--.=.||+
T Consensus 26 ~~~H~~rV~~~a~~ia~~~----~--------------~d~~~l~~AalLHDig~~k-~~~~~~~ga~~a~~~L~~~g~~ 86 (223)
T 3dto_A 26 DWYHIRRVTLMAKAIGEQE----K--------------VDVFVVQIAALFHDLIDDK-LVDDPETAKQQLIDWMEAAGVP 86 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHT----T--------------CCHHHHHHHHHHHSTTC--------CHHHHHHHHHHHTTTCC
T ss_pred cHHHHHHHHHHHHHHHHHc----C--------------CCHHHHHHHHHHhhccccc-cCCCHHHHHHHHHHHHHHcCCC
Confidence 3489999999999875421 2 1357999999999999753 3333344443332110026899
Q ss_pred HHHHHHHHHHHHhccCC
Q 008139 439 TDEIKLIALLTRFHRKK 455 (576)
Q Consensus 439 ~~E~~~iA~i~ryhrk~ 455 (576)
.++...|..++..|+.+
T Consensus 87 ~~~i~~V~~~I~~Hs~~ 103 (223)
T 3dto_A 87 SQKIDHTMDIINTISFK 103 (223)
T ss_dssp HHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHcCCc
Confidence 99999999999988643
No 24
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=96.36 E-value=0.03 Score=58.25 Aligned_cols=108 Identities=16% Similarity=0.205 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHC-CCCcccEEEEeehhhhhcCChHHHHHHHHHHcCCcEE-EeChHHHHHHHHhhhhccCCCCCCceEE
Q 008139 70 ESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVD-VLTGEQEAKFVYMGVLQFLPVFDRLVLS 147 (576)
Q Consensus 70 ~~L~~f~~~~~~~-~v~~~~i~~vATsAvR~A~N~~~fl~~i~~~tG~~i~-vIsg~eEA~l~~~gv~~~l~~~~~~~lv 147 (576)
..|+..++.++.+ +.+..++ +++.-|.=.-.+++.+.+ +-+..|+++- +++.. +|-..+.|.... ..+...+|
T Consensus 136 ~~l~~l~~~a~~~~~~~~~~~-vitvP~~~~~~~r~~~~~-a~~~aGl~~~~li~Ep-~Aaa~~~~~~~~--~~~~~vlV 210 (394)
T 3qfu_A 136 MILGKMKQIAEDYLGTKVTHA-VVTVPAYFNDAQRQATKD-AGTIAGLNVLRIVNEP-TAAAIAYGLDKS--DKEHQIIV 210 (394)
T ss_dssp HHHHHHHHHHHHHHTSCCCEE-EEEECTTCCHHHHHHHHH-HHHHTTCEEEEEEEHH-HHHHHHTTTTSC--SSCEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcceE-EEEECCCCCHHHHHHHHH-HHHHcCCceEEEecCH-HHHHHHHhhccC--CCCceEEE
Confidence 3455555555544 4332222 233333222223333444 4466899965 55544 444433343322 12345799
Q ss_pred EEeCCCceeEEEee--CCeEe---eEEeechhHHHHHHhh
Q 008139 148 VDIGGGSTEFVIGK--RGKVV---FCESVNLGHVSLSEKF 182 (576)
Q Consensus 148 iDIGGGStEl~~~~--~~~~~---~~~SlplG~vrl~e~f 182 (576)
+|+|||+|.+++++ ++.+. ...+.++|.-.+.+.+
T Consensus 211 ~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l 250 (394)
T 3qfu_A 211 YDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKI 250 (394)
T ss_dssp EEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred EEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHH
Confidence 99999999999886 33322 2455899998888754
No 25
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=96.36 E-value=0.025 Score=58.80 Aligned_cols=93 Identities=14% Similarity=0.149 Sum_probs=61.4
Q ss_pred HCCCCcccEEEEeeh-hhhhcCChHHHHHHHHHHcCCcE-EEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEE
Q 008139 81 SHNISRDHTRAVATA-AVRAAENKDEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFV 158 (576)
Q Consensus 81 ~~~v~~~~i~~vATs-AvR~A~N~~~fl~~i~~~tG~~i-~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~ 158 (576)
..++++.+..++-|. +.-...+++.+.+.+.+..|++. .++. |+-++.+|.- . ..++|+|+|||.|.++
T Consensus 93 ~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~---e~~aaa~a~g--~----~~~lVvDiG~gtt~v~ 163 (375)
T 2fxu_A 93 ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI---QAVLSLYASG--R----TTGIVLDSGDGVTHNV 163 (375)
T ss_dssp TSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEE---HHHHHHHHTT--C----SSEEEEEECSSCEEEE
T ss_pred hcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEcc---chheeeeecC--C----CeEEEEEcCCCceEEe
Confidence 346654333334443 33333456667777777789874 4444 4444444421 1 3489999999999999
Q ss_pred EeeCCeEee--EEeechhHHHHHHhh
Q 008139 159 IGKRGKVVF--CESVNLGHVSLSEKF 182 (576)
Q Consensus 159 ~~~~~~~~~--~~SlplG~vrl~e~f 182 (576)
.+.+|.+.. ..++|+|.-.+++.+
T Consensus 164 ~v~~G~~~~~~~~~~~~GG~~lt~~l 189 (375)
T 2fxu_A 164 PIYEGYALPHAIMRLDLAGRDLTDYL 189 (375)
T ss_dssp EEETTEECGGGCEEESCCHHHHHHHH
T ss_pred EeECCEEeccceEEeccCHHHHHHHH
Confidence 999998776 568999998887754
No 26
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=96.33 E-value=0.0089 Score=64.37 Aligned_cols=77 Identities=17% Similarity=0.172 Sum_probs=64.6
Q ss_pred hHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEeeCCeEeeEEeechhHHHHHHhh
Q 008139 103 KDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKF 182 (576)
Q Consensus 103 ~~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~~~SlplG~vrl~e~f 182 (576)
-+.+.+.+++.+|++|+|=. -|++-+-+|++..-. .+-...++|||||||.+++|.+|.+.++.++|+|.--.|...
T Consensus 370 m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE-~eLGvaiIDmGGGTTd~sVf~~G~lv~a~~ip~gG~~VT~DI 446 (610)
T 2d0o_A 370 MAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPG-TTRPLAILDLGAGSTDASIINPKGDIIATHLAGAGDMVTMII 446 (610)
T ss_dssp HHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTT-CCSSEEEEEECSSEEEEEEECTTCCEEEEEEECSHHHHHHHH
T ss_pred HHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC-CcCCeEEEEeCCCcceEEEEcCCcEEEEEEeccchHHHHHHH
Confidence 46688889988899888766 788888888876532 334579999999999999999999999999999999888754
No 27
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=96.28 E-value=0.0094 Score=64.38 Aligned_cols=76 Identities=18% Similarity=0.112 Sum_probs=63.7
Q ss_pred HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEeeCCeEeeEEeechhHHHHHHhh
Q 008139 104 DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKF 182 (576)
Q Consensus 104 ~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~~~SlplG~vrl~e~f 182 (576)
..+.+.+++.+|++|+|=. -|++-+-+|++..-. .+-...++|||||||.+++|.+|.+.++.++|+|.--.|...
T Consensus 373 ~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE-~elGvaiIDmGgGTTd~sVf~~g~lv~a~~ip~gG~~VT~DI 448 (607)
T 1nbw_A 373 QVIARELSARLQTEVVVGG--VEANMAIAGALTTPG-CAAPLAILDLGAGSTDAAIVNAEGQITAVHLAGAGNMVSLLI 448 (607)
T ss_dssp CCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTT-CCSSEEEEEECSSEEEEEEECSSSCEEEEEEECCHHHHHHHH
T ss_pred HHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC-CcCCeEEEEeCCCcceEEEEcCCcEEEEEEeccchHHHHHHH
Confidence 3477888888899888866 888888888876532 334579999999999999999999999999999998888754
No 28
>2pjq_A Uncharacterized protein LP_2664; LPR71, NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Lactobacillus plantarum WCFS1} SCOP: a.211.1.1
Probab=96.28 E-value=0.0073 Score=58.74 Aligned_cols=77 Identities=10% Similarity=0.029 Sum_probs=48.6
Q ss_pred chhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCCH
Q 008139 360 VKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYST 439 (576)
Q Consensus 360 ~~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~~I~~~~h~~Hs~yiI~ns~~l~G~s~ 439 (576)
..|..+|.++|..|-... + .+..++.+||+|||||..- +.++...++.+...--.=.||+.
T Consensus 32 ~~H~~rV~~~a~~ia~~~----~--------------~d~~ll~lAAlLHDigk~k-~~~~~~~ga~~a~~~L~~~g~~~ 92 (231)
T 2pjq_A 32 RDHLQRVNRLARRLAKDE----G--------------ANLNLTLAAAWLHDVIDDK-LMANPAKAHQDLIVQLNAQNVTA 92 (231)
T ss_dssp HHHHHHHHHHHHHHHHHH----T--------------CCHHHHHHHHHHHHHHC----------CHHHHHHHHHTTTCCH
T ss_pred HHHHHHHHHHHHHHHHHc----C--------------CCHHHHHHHHHHHcCCccc-CCChHHHHHHHHHHHHHHCCCCH
Confidence 379999999999874332 2 1247999999999999842 22232333333222100158999
Q ss_pred HHHHHHHHHHHhccCC
Q 008139 440 DEIKLIALLTRFHRKK 455 (576)
Q Consensus 440 ~E~~~iA~i~ryhrk~ 455 (576)
++...|..++..|+.+
T Consensus 93 ~~~~~V~~~I~~Hs~~ 108 (231)
T 2pjq_A 93 DDQTAIFAIIDHMSFS 108 (231)
T ss_dssp HHHHHHHHHHTSCCTG
T ss_pred HHHHHHHHHHHHcCCc
Confidence 9999999999988643
No 29
>3djb_A Hydrolase, HD family; all alpha-helical protein., structural genomics, PSI-2, protein structure initiative; 2.90A {Bacillus thuringiensis serovarkonkukian} SCOP: a.211.1.1
Probab=95.81 E-value=0.018 Score=55.66 Aligned_cols=78 Identities=13% Similarity=0.027 Sum_probs=52.1
Q ss_pred cchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCC
Q 008139 359 RVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYS 438 (576)
Q Consensus 359 ~~~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~~I~~~~h~~Hs~yiI~ns~~l~G~s 438 (576)
+..|..+|.++|..|-. ..+ .+..++.+||+|||||.. -+.+|..-++-++..--.=.||+
T Consensus 26 ~~~H~~rV~~~a~~ia~----~~~--------------~d~~~l~~AAlLHDig~~-k~~~h~~~ga~~a~~~L~~~g~~ 86 (223)
T 3djb_A 26 DWYHIRRVHKMAISLSE----QEG--------------GNRFIIEMAALLHDVADE-KLNESEEAGMKKVSDWLEELHVE 86 (223)
T ss_dssp THHHHHHHHHHHHHHHT----TTC--------------SCHHHHHHHHTTHHHHC---CCSSSTTTHHHHHHHHHHTCCC
T ss_pred cHHHHHHHHHHHHHHHH----HcC--------------CCHHHHHHHHHHhhcccc-ccCCcHHHHHHHHHHHHHHCCCC
Confidence 34899999999998632 212 235799999999999984 33344555543332210016899
Q ss_pred HHHHHHHHHHHHhccCC
Q 008139 439 TDEIKLIALLTRFHRKK 455 (576)
Q Consensus 439 ~~E~~~iA~i~ryhrk~ 455 (576)
..+...|..++..|+.+
T Consensus 87 ~~~i~~V~~~I~~Hs~~ 103 (223)
T 3djb_A 87 EEESKHVLHIIANMSYK 103 (223)
T ss_dssp HHHHHHHHHHTTCCC--
T ss_pred HHHHHHHHHHHHHhCCc
Confidence 99999999999998643
No 30
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=95.77 E-value=0.083 Score=53.90 Aligned_cols=75 Identities=20% Similarity=0.261 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHcCCcEE-EeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEeeCCeEeeEEeechhHHHHHHh
Q 008139 103 KDEFVECVREKVGFEVD-VLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEK 181 (576)
Q Consensus 103 ~~~fl~~i~~~tG~~i~-vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~~~SlplG~vrl~e~ 181 (576)
++.+.+ +-+..|+++- +++...=|-+.| |.. .. .+...+|+|+|||+|.++++..+.+....++++|.-.+++.
T Consensus 111 r~~~~~-a~~~aG~~~~~li~ep~Aaa~~~-~~~--~~-~~~~~lVvDiGggttdvsv~~~~~~~~~~~~~lGG~~id~~ 185 (344)
T 1jce_A 111 RRAILD-AGLEAGASKVFLIEEPMAAAIGS-NLN--VE-EPSGNMVVDIGGGTTEVAVISLGSIVTWESIRIAGDEMDEA 185 (344)
T ss_dssp HHHHHH-HHHHTTCSEEEEEEHHHHHHHHT-TCC--TT-SSSCEEEEEECSSCEEEEEEETTEEEEEEEESCSHHHHHHH
T ss_pred HHHHHH-HHHHcCCCeEeccCCHHHHHHhc-CCC--CC-CCceEEEEEeCCCeEEEEEEEcCCEEeeCCCCccChhHHHH
Confidence 344444 5567899864 555554444443 321 11 23568999999999999999999999999999999888875
Q ss_pred h
Q 008139 182 F 182 (576)
Q Consensus 182 f 182 (576)
+
T Consensus 186 l 186 (344)
T 1jce_A 186 I 186 (344)
T ss_dssp H
T ss_pred H
Confidence 5
No 31
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=95.57 E-value=0.2 Score=54.21 Aligned_cols=108 Identities=17% Similarity=0.260 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHC-CCCcccEEEEeehhhhhcCChHHHHHHHHHHcCCcEE-EeChHHHHHHHHhhhhccCCCCCCceE
Q 008139 69 VESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVD-VLTGEQEAKFVYMGVLQFLPVFDRLVL 146 (576)
Q Consensus 69 ~~~L~~f~~~~~~~-~v~~~~i~~vATsAvR~A~N~~~fl~~i~~~tG~~i~-vIsg~eEA~l~~~gv~~~l~~~~~~~l 146 (576)
-..|+..++.++.+ +.+..++ +++--|.=....++...+ +-+..|+++- +++...=|-+.| |.... .+...+
T Consensus 91 a~~L~~l~~~ae~~l~~~~~~~-VitvPa~~~~~qr~a~~~-a~~~AGl~~~~li~Ep~AAAlay-~~~~~---~~~~vl 164 (509)
T 2v7y_A 91 AIILQYLKSYAEDYLGEPVTRA-VITVPAYFNDAQRQATKD-AGRIAGLEVERIINEPTAAALAY-GLDKE---EDQTIL 164 (509)
T ss_dssp HHHHHHHHHHHHHHHTSCCCEE-EEEECTTCCHHHHHHHHH-HHHHTTCEEEEEEEHHHHHHHHT-TGGGS---CSEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCeE-EEEECCCCCHHHHHHHHH-HHHHcCCCeEEEecCHHHHHHHH-hhccC---CCCEEE
Confidence 34456666555543 3322222 233222111112333444 4466799865 555554444444 43321 235689
Q ss_pred EEEeCCCceeEEEee--CCeEe---eEEeechhHHHHHHhh
Q 008139 147 SVDIGGGSTEFVIGK--RGKVV---FCESVNLGHVSLSEKF 182 (576)
Q Consensus 147 viDIGGGStEl~~~~--~~~~~---~~~SlplG~vrl~e~f 182 (576)
|+|+|||+|.+++++ ++.+. .....++|.-.+.+.+
T Consensus 165 V~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l 205 (509)
T 2v7y_A 165 VYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVI 205 (509)
T ss_dssp EEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred EEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHH
Confidence 999999999999887 45432 2345789988877654
No 32
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=94.66 E-value=0.045 Score=56.37 Aligned_cols=62 Identities=11% Similarity=0.053 Sum_probs=43.7
Q ss_pred cEEEeChHHHHHHHHhhhhccCCC--CCCceEEEEeCCCceeEEEee--CCeEee--EEeechhHHHHHHh
Q 008139 117 EVDVLTGEQEAKFVYMGVLQFLPV--FDRLVLSVDIGGGSTEFVIGK--RGKVVF--CESVNLGHVSLSEK 181 (576)
Q Consensus 117 ~i~vIsg~eEA~l~~~gv~~~l~~--~~~~~lviDIGGGStEl~~~~--~~~~~~--~~SlplG~vrl~e~ 181 (576)
++++++..-=|.+.|+ ...+. ++...+|+|||||.|+++++. +|.++. +.++++|.-.+.+.
T Consensus 165 ~v~li~Ep~AAa~~~l---~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~ 232 (346)
T 2fsj_A 165 RLIMRPQGVGAALYLL---NQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISA 232 (346)
T ss_dssp EEEEEETTHHHHHHHH---HHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHH
T ss_pred EEEEEccHHHHHHHhh---ccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHH
Confidence 3667777766666652 22222 224469999999999999999 776666 58999998766553
No 33
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=94.48 E-value=0.61 Score=46.86 Aligned_cols=141 Identities=17% Similarity=0.165 Sum_probs=87.9
Q ss_pred ccccccCCCceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 008139 4 NTSYMQIPQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHN 83 (576)
Q Consensus 4 ~~~~~~~~~~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~ 83 (576)
|||| +.+..||+|..++++.+++. +|. ++.+.+.++.. .. =.++.++...++++++.+ +.+
T Consensus 2 ~~m~-----~~~lgiDiggt~~~~~l~d~--~g~--il~~~~~~~~~----~~---~~~~~~~~l~~~i~~~~~---~~~ 62 (326)
T 2qm1_A 2 NAMD-----KKIIGIDLGGTTIKFAILTT--DGV--VQQKWSIETNI----LE---DGKHIVPSIIESIRHRID---LYN 62 (326)
T ss_dssp CGGG-----CEEEEEEECSSEEEEEEEET--TCC--EEEEEEEECCC----TT---TTTTHHHHHHHHHHHHHH---HTT
T ss_pred CCcc-----cEEEEEEECCCEEEEEEECC--CCC--EEEEEEEcCCC----CC---CHHHHHHHHHHHHHHHHH---HcC
Confidence 6776 56789999999999999975 354 34444333221 01 124556777777766644 455
Q ss_pred CCcccEE--EEeehhhhhcC--------C----hH-HHHHHHHHHcCCcEEEeChHHHHHHHH--hhhhccCCCCCCceE
Q 008139 84 ISRDHTR--AVATAAVRAAE--------N----KD-EFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVL 146 (576)
Q Consensus 84 v~~~~i~--~vATsAvR~A~--------N----~~-~fl~~i~~~tG~~i~vIsg~eEA~l~~--~gv~~~l~~~~~~~l 146 (576)
++..++. ++|....-+.. | .. .+.+.+++.+|++|.+.+.-.=+-+.- .|... ..++.+
T Consensus 63 ~~~~~i~~igi~~pG~vd~~~g~v~~~~~l~w~~~~~l~~~l~~~~~~pv~v~ND~~aaa~~e~~~g~~~----~~~~~~ 138 (326)
T 2qm1_A 63 MKKEDFVGIGMGTPGSVDIEKGTVVGAYNLNWTTVQPVKEQIESALGIPFALDNDANVAALGERWKGAGE----NNPDVI 138 (326)
T ss_dssp CCGGGEEEEEEEESSEEETTTTEEECBGGGTBCSCBCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTT----TCSCEE
T ss_pred CCccceeEEEEecccceeCCCCEEEecCCCCccCCchHHHHHHHHhCCCEEEecHHHHHHHHHHHhCCCC----CCCcEE
Confidence 5433454 44555532221 2 12 667888999999999987665554442 22211 234589
Q ss_pred EEEeCCCceeEEEeeCCeEeeE
Q 008139 147 SVDIGGGSTEFVIGKRGKVVFC 168 (576)
Q Consensus 147 viDIGGGStEl~~~~~~~~~~~ 168 (576)
++-+|.| +-..+..+|++...
T Consensus 139 ~l~~GtG-iG~giv~~G~l~~G 159 (326)
T 2qm1_A 139 FITLGTG-VGGGIVAAGKLLHG 159 (326)
T ss_dssp EEEESSS-EEEEEEETTEECCC
T ss_pred EEEECCc-eEEEEEECCEEeec
Confidence 9999999 66777788887653
No 34
>3gw7_A Uncharacterized protein YEDJ; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Escherichia coli k-12}
Probab=94.27 E-value=0.013 Score=57.37 Aligned_cols=76 Identities=12% Similarity=0.169 Sum_probs=50.9
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCC----CCchhhhHHHH---HcCCC
Q 008139 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSK----KGYHKQSCHII---MNGDH 433 (576)
Q Consensus 361 ~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~~I~~----~~h~~Hs~yiI---~ns~~ 433 (576)
.|..+|.++|..| ....+ .+..++.+||+|||||..-.+ ..|..-|+.++ +...
T Consensus 28 ~H~~rV~~~a~~i----a~~~~--------------~d~~~~~~AalLHDig~~~~~~~~~~~H~~~ga~~A~~~L~~~- 88 (239)
T 3gw7_A 28 CHFRRVWATAQKL----AADDD--------------VDMLVILTACYFHDIVSLAKNHPQRQRSSILAAEETRRLLREE- 88 (239)
T ss_dssp CHHHHHHHHHHHH----TTTSC--------------SCTTHHHHHHHHTTTTC--------CCSSHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHH----HHHcC--------------CCHHHHHHHHHHhhcccccccCCccccHHHHHHHHHHHHHHhc-
Confidence 7999999999875 32222 124689999999999986321 12334444333 3332
Q ss_pred CCCCCHHHHHHHHHHHHhccCC
Q 008139 434 LYGYSTDEIKLIALLTRFHRKK 455 (576)
Q Consensus 434 l~G~s~~E~~~iA~i~ryhrk~ 455 (576)
+.||+..+...|..++..|+.+
T Consensus 89 ~~g~~~e~i~~V~~~I~~Hs~~ 110 (239)
T 3gw7_A 89 FEQFPAEKIEAVCHAIAAHSFS 110 (239)
T ss_dssp TTSSCTTTTTSTTTGGGSSCTT
T ss_pred cCCcCHHHHHHHHHHHHHcCCC
Confidence 4799999999999999988754
No 35
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=93.83 E-value=0.055 Score=55.32 Aligned_cols=90 Identities=13% Similarity=0.180 Sum_probs=56.9
Q ss_pred cEEEEeehhhhhc---CChHHHHHHHHHH--c-----CC-------cEEEeChHHHHHHHHhhhhccCCCCCCceEEEEe
Q 008139 88 HTRAVATAAVRAA---ENKDEFVECVREK--V-----GF-------EVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDI 150 (576)
Q Consensus 88 ~i~~vATsAvR~A---~N~~~fl~~i~~~--t-----G~-------~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDI 150 (576)
.+..+..=-+..- +.+++|.+.++.. . |. ++.|+...-=|.+.+ .. ...+...+++||
T Consensus 105 ~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~---~~--~~~~~~v~vvDi 179 (329)
T 4apw_A 105 KVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLE---QE--NFKNKNVAVIDF 179 (329)
T ss_dssp EEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHS---CC--CCTTCEEEEEEE
T ss_pred eEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhc---ch--hhccCCEEEEEe
Confidence 3444544444444 3477888877642 1 21 244444332222221 11 123455799999
Q ss_pred CCCceeEEEeeCCeEe--eEEeechhHHHHHHhh
Q 008139 151 GGGSTEFVIGKRGKVV--FCESVNLGHVSLSEKF 182 (576)
Q Consensus 151 GGGStEl~~~~~~~~~--~~~SlplG~vrl~e~f 182 (576)
|||.|+++++.++.+. .+.|+|+|.-.+++..
T Consensus 180 GggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i 213 (329)
T 4apw_A 180 GGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRV 213 (329)
T ss_dssp CSSCEEEEEEETTEECGGGCEEESCCHHHHHHHH
T ss_pred CCCcEEEEEEECCEEeeccccchhhHHHHHHHHH
Confidence 9999999999999998 4579999999988754
No 36
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=93.71 E-value=0.37 Score=50.17 Aligned_cols=110 Identities=16% Similarity=0.224 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHC-CCCcccEEEEeehhhhhcCChHHHHHHHHHHcCCcE-EEeChHHHHHHHHhhhhccCCC-CCCceE
Q 008139 70 ESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQFLPV-FDRLVL 146 (576)
Q Consensus 70 ~~L~~f~~~~~~~-~v~~~~i~~vATsAvR~A~N~~~fl~~i~~~tG~~i-~vIsg~eEA~l~~~gv~~~l~~-~~~~~l 146 (576)
..|+..++.++.+ +.+..+ .+++--|.=....++ .+.++-+..|+++ .+++..+-|-+.| +.....+. .+...+
T Consensus 141 ~~L~~l~~~a~~~~~~~~~~-~vitvPa~~~~~~r~-~~~~a~~~AGl~~~~li~Ep~AAa~~~-~~~~~~~~~~~~~vl 217 (404)
T 3i33_A 141 MVLTKMKEIAEAYLGGKVHS-AVITVPAYFNDSQRQ-ATKDAGTITGLNVLRIINEPTAAAIAY-GLDKKGCAGGEKNVL 217 (404)
T ss_dssp HHHHHHHHHHHHHHSSCCCE-EEEEECTTCCHHHHH-HHHHHHHHHTCEEEEEEEHHHHHHHHT-TTTSSCSSSSCCEEE
T ss_pred HHHHHHHHHHHHHhccCCCc-EEEEECCCCCHHHHH-HHHHHHHHcCCCeEEEeccHHHHHHHH-HhhcccccCCCceEE
Confidence 3445555555443 333222 233333322222333 3444556679985 5666555555544 43332211 235579
Q ss_pred EEEeCCCceeEEEee--CCeEe---eEEeechhHHHHHHhh
Q 008139 147 SVDIGGGSTEFVIGK--RGKVV---FCESVNLGHVSLSEKF 182 (576)
Q Consensus 147 viDIGGGStEl~~~~--~~~~~---~~~SlplG~vrl~e~f 182 (576)
|+|+|||+|.+++++ ++.+. ...+.++|.-.+.+.+
T Consensus 218 V~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l 258 (404)
T 3i33_A 218 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 258 (404)
T ss_dssp EEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred EEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHH
Confidence 999999999999886 44332 2445789988877654
No 37
>3hc1_A Uncharacterized HDOD domain protein; HDOD domain protein with unknown function, STRU genomics, joint center for structural genomics; 1.90A {Geobacter sulfurreducens}
Probab=93.60 E-value=0.1 Score=52.60 Aligned_cols=95 Identities=18% Similarity=0.092 Sum_probs=63.0
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCC-----------------------
Q 008139 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSK----------------------- 417 (576)
Q Consensus 361 ~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~~I~~----------------------- 417 (576)
.|+.+|+.+|..|-. ..++. +...+..|++|||||+..=+
T Consensus 121 ~hs~~va~~a~~la~----~~~~~-------------~~~~~~~agllHDIGkl~l~~~~p~~~~~il~~~~~~~~~l~~ 183 (305)
T 3hc1_A 121 AHSLGVARIAKLIAE----RTGFL-------------NPVNVYVAGLLHDVGEVFINFFRGKEFSQVVTLVDEEKITFGQ 183 (305)
T ss_dssp HHHHHHHHHHHHHHH----HTTCS-------------CHHHHHHHHHTTTHHHHHHHHHSHHHHHHHHHHHHHHCCCHHH
T ss_pred HHHHHHHHHHHHHHH----HcCCC-------------CHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 699999999987543 33321 23578899999999986521
Q ss_pred -------CCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCCchhhccCChHHHHHHHHHHHHHHHHHHhcc
Q 008139 418 -------KGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQ 490 (576)
Q Consensus 418 -------~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~ryhrk~~~~~~~~~~~~L~~~~~~~v~kL~~iLRlA~~Ld~ 490 (576)
..|..-+++++.+.+ ++ ..++.+++||....... . ....++.|+.+|+.++.
T Consensus 184 ~E~~~~~~~H~~iG~~ll~~w~-lp-------~~i~~~I~~HHe~~~~~---------~----~~~~~a~Iv~lAD~~~~ 242 (305)
T 3hc1_A 184 AEERLFGTSHCEVGFALAKRWS-LN-------EFICDTILYHHDIEAVP---------Y----KQAAIVAMVAFADEYCT 242 (305)
T ss_dssp HHHHHHSSCHHHHHHHHHHHTT-CC-------HHHHHHHHHTTCGGGCS---------S----SCCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHcC-CC-------HHHHHHHHHhCChhhcc---------c----cccHHHHHHHHHHHHHH
Confidence 367888888888775 54 34566667776422110 0 12247889999999987
Q ss_pred ccC
Q 008139 491 NDC 493 (576)
Q Consensus 491 s~~ 493 (576)
-..
T Consensus 243 ~~~ 245 (305)
T 3hc1_A 243 LRR 245 (305)
T ss_dssp HTT
T ss_pred HhC
Confidence 654
No 38
>2q14_A Phosphohydrolase; BT4208, HD domain, structural genomics, JO center for structural genomics, JCSG; HET: MSE ADP; 2.20A {Bacteroides thetaiotaomicron vpi-5482}
Probab=93.56 E-value=0.1 Score=54.91 Aligned_cols=60 Identities=20% Similarity=0.200 Sum_probs=44.2
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccc---------c-CCCCchhhhHHHHHc
Q 008139 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHF---------T-SKKGYHKQSCHIIMN 430 (576)
Q Consensus 361 ~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~~---------I-~~~~h~~Hs~yiI~n 430 (576)
.|+--|+.+|..+.+.+..... .+++.+..++++||+|||||.. + ...+|...|..++.+
T Consensus 58 ~HSLgV~~la~~l~~~l~~~~~----------~~~~~d~~~~~~AaLlHDiGh~PfsH~~E~~~~~~~~He~~s~~ii~~ 127 (410)
T 2q14_A 58 QHSLGAFYLMSEAITQLTSKGN----------FIFDSEAEAVQAAILLHDIGHGPFSHVLEDTIVQGVSHEEISLMLMER 127 (410)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTC----------CCCHHHHHHHHHHHHHTTTTCCTTHHHHHTTTSTTCCHHHHHHHHHHH
T ss_pred ehHHHHHHHHHHHHHHHHhcCC----------CCCHHHHHHHHHHHHHhccCCCccccccHHhhcCCCCHHHHHHHHHHH
Confidence 7999999999999888764310 2455567899999999999972 1 145666677777753
No 39
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=93.50 E-value=0.28 Score=52.99 Aligned_cols=151 Identities=13% Similarity=0.082 Sum_probs=87.1
Q ss_pred EEEEEecccceEEEEEEEeCCCCEE-----EEEeee----eeeeeccC-C------------CcCCCCC-HHHHHHHHHH
Q 008139 15 FASIDMGTSSFKLLIIRAYPNGKFL-----TIDTLK----QPVILGRD-L------------SSSCSIS-TQSQARSVES 71 (576)
Q Consensus 15 ~AvIDIGSNsirL~I~e~~~~~~~~-----~l~~~k----~~vrLg~~-~------------~~~g~Ls-~e~i~r~~~~ 71 (576)
.-|||+||.++|.-.+. ++.++ ++...+ ...-.|.. . .++|.|. -+.+++.++-
T Consensus 25 ~iVID~GS~~~kaG~ag---~~~P~~v~PSvVg~~~~~~~~~~~vG~e~~~~~r~~l~l~~Pi~~GvI~dwd~~E~iw~~ 101 (498)
T 3qb0_A 25 AVVIDPGSYTTNIGYSG---SDFPQSILPSVYGKYTADEGNKKIFSEQSIGIPRKDYELKPIIENGLVIDWDTAQEQWQW 101 (498)
T ss_dssp CEEEECCSSEEEEEETT---CSSCSEEEESEEEEESSCSSCCEECCTTGGGSCCTTEEEEESEETTEESCHHHHHHHHHH
T ss_pred eEEEECCCcEEEEEECC---CCCeeeecCceeEEeccCCCccEEEecHHHhcCcCceEEeccCcCCEEccHHHHHHHHHH
Confidence 35899999999876542 22211 222211 11223432 1 1345444 3555544443
Q ss_pred HHHHHHHHHHCCCCcc-cEEEEeehhhhh-cCChHHHHHHHHHHcCCc-EEEeChHHHHHHHHhhhhccCCCCCCceEEE
Q 008139 72 LLMFRDIIQSHNISRD-HTRAVATAAVRA-AENKDEFVECVREKVGFE-VDVLTGEQEAKFVYMGVLQFLPVFDRLVLSV 148 (576)
Q Consensus 72 L~~f~~~~~~~~v~~~-~i~~vATsAvR~-A~N~~~fl~~i~~~tG~~-i~vIsg~eEA~l~~~gv~~~l~~~~~~~lvi 148 (576)
+ |. +..++.+. ++.++-|.+.-. -.|++.+.+.+.+..|++ +-++. ++-++.+|. +. ..++|+
T Consensus 102 ~--f~---~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~---~~vlalya~--G~----~tglVV 167 (498)
T 3qb0_A 102 A--LQ---NELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAP---TSTCVSFAA--GR----PNCLVV 167 (498)
T ss_dssp H--HH---HTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEE---HHHHHHHHH--TC----SSEEEE
T ss_pred H--HH---hhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecc---hHHHHHHHc--CC----CeEEEE
Confidence 2 22 23455432 213455554322 346677777777778876 33333 455554443 22 238999
Q ss_pred EeCCCceeEEEeeCCeEee--EEeechhHHHHHHhh
Q 008139 149 DIGGGSTEFVIGKRGKVVF--CESVNLGHVSLSEKF 182 (576)
Q Consensus 149 DIGGGStEl~~~~~~~~~~--~~SlplG~vrl~e~f 182 (576)
|+|+|.|+++.+-+|.+.. ..++++|.-.+++.+
T Consensus 168 DiG~g~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L 203 (498)
T 3qb0_A 168 DIGHDTCSVSPIVDGMTLSKSTRRNFIAGKFINHLI 203 (498)
T ss_dssp EECSSCEEEEEEETTEECGGGCEEESCSHHHHHHHH
T ss_pred EcCCCcEEEEEEeCCEEccccceeccccHHHHHHHH
Confidence 9999999999999998873 568999998888754
No 40
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=93.28 E-value=0.63 Score=45.91 Aligned_cols=115 Identities=16% Similarity=0.220 Sum_probs=62.9
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEEE-E
Q 008139 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRA-V 92 (576)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~-v 92 (576)
.+..||+||.+++.++++ .+| +++.....+.. | .. .+++.+ ++++..+ .+++..++.. .
T Consensus 4 ~~lGiD~Gst~~k~~l~d--~~g--~i~~~~~~~~~-~-------~~-~~~~~~---~l~~l~~----~~~~~~~i~~i~ 63 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILK--DGK--EIVAKSLVAVG-T-------GT-SGPARS---ISEVLEN----AHMKKEDMAFTL 63 (270)
T ss_dssp EEEEEEECSSEEEEEEEE--TTT--EEEEEEEEECC-S-------SC-CHHHHH---HHHHHHH----HTCCGGGCSEEE
T ss_pred EEEEEEeccceEEEEEEe--CCC--CEEEEEEecCC-C-------CH-HHHHHH---HHHHHHH----cCCChhHEEEEE
Confidence 578999999999999996 345 34544433321 1 11 144443 3333322 1333234443 4
Q ss_pred eehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEeeCCeEe
Q 008139 93 ATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVV 166 (576)
Q Consensus 93 ATsAvR~A~N~~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~ 166 (576)
+|---|..-+. .+. .+++ |-+|. +.|+....+ +. ..++||||+.+.++.+++|++.
T Consensus 64 ~TG~g~~~~~~----------~~~--~~v~-Ei~ah--~~ga~~~~~--~~-~~vidiGGqd~k~i~~~~g~v~ 119 (270)
T 1hux_A 64 ATGYGRNSLEG----------IAD--KQMS-ELSCH--AMGASFIWP--NV-HTVIDIGGQDVKVIHVENGTMT 119 (270)
T ss_dssp EESTTTTTTTT----------TCS--EEEC-HHHHH--HHHHHHHCT--TC-CEEEEEETTEEEEEEEETTEEE
T ss_pred EeCccccchhh----------cCC--CCcc-cHHHH--HHHHHHhCC--CC-CEEEEECCCceEEEEEeCCcee
Confidence 45544432211 122 3333 33333 345544444 22 3789999999999999999865
No 41
>3sk9_A Putative uncharacterized protein TTHB187; crispr, CAS, HD domain, nuclease, hydrolase; 1.80A {Thermus thermophilus HB8} PDB: 3skd_A
Probab=92.95 E-value=0.13 Score=51.01 Aligned_cols=88 Identities=14% Similarity=-0.009 Sum_probs=58.9
Q ss_pred hhHHHHHHHHHHHHHHH--------HhcccccchhhhhhcccCcchHHHHHHHHHHhhccccc----C------------
Q 008139 361 KAGAQCASIAKDIFEGL--------RKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT----S------------ 416 (576)
Q Consensus 361 ~ha~~V~~~A~~LFd~l--------~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~~I----~------------ 416 (576)
.|..-|+..|..|++.. ....|++ ++..+.++.++|.|||||++- .
T Consensus 28 ~HllDvAava~~L~~~~~~~~r~~la~~~g~~----------~~~~~~~~~~~~~lHDiGK~~~~fq~~~~~~~~~l~~~ 97 (265)
T 3sk9_A 28 AHMLDTAAVALAVLRMEPPRTRALYAEDWGLP----------EEGALAWAAALVGLHDLGKASPVFQAGWEEGKERVQRA 97 (265)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHHHHHHHTSC----------HHHHHHHHHHHHTTTTGGGCSGGGCC------------
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHhCCC----------HHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHhhc
Confidence 68888888888887763 2223321 113467899999999999971 1
Q ss_pred ---------CCCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCC
Q 008139 417 ---------KKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPR 458 (576)
Q Consensus 417 ---------~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~ryhrk~~~~ 458 (576)
...|..-|++++.+--.=.|++.+....++.++..|.+..|.
T Consensus 98 g~~~~~~~~~~~Ha~aGa~ll~~~L~~~g~~~~~~~~ia~~I~gHHG~~p~ 148 (265)
T 3sk9_A 98 GLPFGELLDWVAHGVFTELFLRRLLKEKGLPERAANDLAAALGAHHGFPAN 148 (265)
T ss_dssp ---------CCCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTSTTTTSCCC
T ss_pred cCCccccCCCCChHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCCCC
Confidence 124555566766432000388888888999988888887775
No 42
>3u1n_A SAM domain and HD domain-containing protein 1; deoxynucleotide triphosphohydrolase, hydrolase; 3.10A {Homo sapiens}
Probab=92.59 E-value=0.22 Score=53.65 Aligned_cols=46 Identities=17% Similarity=0.299 Sum_probs=34.8
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccc
Q 008139 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHF 414 (576)
Q Consensus 361 ~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~~ 414 (576)
.|+--|+.+|..+.+.|..... +. .+++.+..++++||+|||||..
T Consensus 68 ~HSLgV~~la~~i~~~l~~~~~----~~----~~~~~d~~~v~~AaLlHDiGH~ 113 (528)
T 3u1n_A 68 EHSLGVGYLAGCLVHALGEKQP----EL----QISERDVLCVQIAGLCHDLGHG 113 (528)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCG----GG----CCCHHHHHHHHHHHHHTTTTCB
T ss_pred HHHHHHHHHHHHHHHHHHhhCc----cc----CCCHHHHHHHHHHHHHhccCCC
Confidence 7999999999999988864321 00 2344566899999999999964
No 43
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=92.48 E-value=0.11 Score=53.65 Aligned_cols=64 Identities=14% Similarity=0.101 Sum_probs=45.0
Q ss_pred cEEEeChHHHHHHHHhhhhccCC----CCCCceEEEEeCCCceeEEEeeCCeEe--eEEeechhHHHHHHhh
Q 008139 117 EVDVLTGEQEAKFVYMGVLQFLP----VFDRLVLSVDIGGGSTEFVIGKRGKVV--FCESVNLGHVSLSEKF 182 (576)
Q Consensus 117 ~i~vIsg~eEA~l~~~gv~~~l~----~~~~~~lviDIGGGStEl~~~~~~~~~--~~~SlplG~vrl~e~f 182 (576)
+|.|+...-=|.+.+. . ...+ ..+...+++|||||.|+++++.++.+. .+.|+++|.-.+.+..
T Consensus 156 ~V~v~pE~~~a~~~~~-~-~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i 225 (355)
T 3js6_A 156 GVKIVAQPMGTLLDLN-M-ENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRI 225 (355)
T ss_dssp EEEEEEHHHHHHHHTT-E-ETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHH
T ss_pred EEEEEeCcHHHHHHHH-H-ccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHH
Confidence 5666765555555432 1 1111 024558999999999999999999887 5678999999888754
No 44
>2hek_A Hypothetical protein; predominantly alpha helical protein with GDP binding site AN site being FAR from EACH other, structural genomics, PSI; HET: GDP; 2.00A {Aquifex aeolicus} SCOP: a.211.1.1
Probab=92.47 E-value=0.24 Score=51.46 Aligned_cols=76 Identities=24% Similarity=0.356 Sum_probs=54.1
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhccccc----------CCCCchhhhHHHHHc
Q 008139 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT----------SKKGYHKQSCHIIMN 430 (576)
Q Consensus 361 ~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~~I----------~~~~h~~Hs~yiI~n 430 (576)
.|+..|+.+|..|.+.+. + +++ .++.+||+|||||... ...+|.+-|..++.+
T Consensus 53 ~Hsl~V~~~a~~ia~~~~----~-----------~~~--~~~~~AaLLHDiG~~pfsh~~e~~~~~g~~He~~g~~i~~~ 115 (371)
T 2hek_A 53 EHSLGVYHITERICESLK----V-----------KEK--ELVKLAGLLHDLGHPPFSHTTEVLLPRERSHEDFTERVIKE 115 (371)
T ss_dssp HHHHHHHHHHHHHHHHHT----C-----------TTH--HHHHHHHHTTTTTCCSSSSCHHHHSTTSSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcC----C-----------CHH--HHHHHHHHHHhcCccccccchHHHhccCCCHHHHHHHHHhc
Confidence 799999999998866542 1 222 6899999999999976 446777778888753
Q ss_pred CC---CCCC-CCHHHHHHHHHHHHhcc
Q 008139 431 GD---HLYG-YSTDEIKLIALLTRFHR 453 (576)
Q Consensus 431 s~---~l~G-~s~~E~~~iA~i~ryhr 453 (576)
.+ -|.. +++++...++.++..++
T Consensus 116 ~~i~~iL~~~~~~~~i~~I~~~I~~~~ 142 (371)
T 2hek_A 116 TEIYEILKQDYSHEDIERLVRITLGKP 142 (371)
T ss_dssp SHHHHHHHTTSCHHHHHHHHHHHHTCC
T ss_pred chHHHHHHHhCCHHHHHHHHHHHhcCC
Confidence 10 0111 78888888888777543
No 45
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=92.45 E-value=0.89 Score=49.71 Aligned_cols=74 Identities=22% Similarity=0.358 Sum_probs=48.4
Q ss_pred HHHHHHHcCCcE-EEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEee--CCeEe---eEEeechhHHHHHH
Q 008139 107 VECVREKVGFEV-DVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGK--RGKVV---FCESVNLGHVSLSE 180 (576)
Q Consensus 107 l~~i~~~tG~~i-~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~--~~~~~---~~~SlplG~vrl~e 180 (576)
+..+-+..|+++ ++++...-|-+.| |.....+ .+...+|+|+|||+|.+++++ +|.+. ...+.++|.-.+.+
T Consensus 158 ~~~A~~~AGl~~~~li~EP~AAAlay-~~~~~~~-~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~ 235 (554)
T 1yuw_A 158 TKDAGTIAGLNVLRIINEPTAAAIAY-GLDKKVG-AERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDN 235 (554)
T ss_dssp HHHHHHTTTCEEEEEEEHHHHHHHHT-TCSTTCS-SCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHH
T ss_pred HHHHHHHcCCCeEEEeCcHHHHHHHH-HhhccCC-CCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHH
Confidence 344455679986 4566555555544 4332211 235689999999999999987 66653 45567899877765
Q ss_pred hh
Q 008139 181 KF 182 (576)
Q Consensus 181 ~f 182 (576)
.+
T Consensus 236 ~l 237 (554)
T 1yuw_A 236 RM 237 (554)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 46
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=92.07 E-value=2.3 Score=42.26 Aligned_cols=130 Identities=12% Similarity=0.086 Sum_probs=79.4
Q ss_pred CceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccE--
Q 008139 12 QTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHT-- 89 (576)
Q Consensus 12 ~~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i-- 89 (576)
++.+..||+|..++|+.+++. +|. ++.+.+.+. . .. ..+ .++.++...++++++.+ +.+++..++
T Consensus 10 ~~~~lGiDiGgT~i~~~l~d~--~G~--il~~~~~~~-~--~~-~~~--~~~~~~~l~~~i~~~l~---~~~~~~~~i~~ 76 (305)
T 1zc6_A 10 IRYLIGVDGGGTGTRIRLHAS--DGT--PLAMAEGGA-S--AL-SQG--IAKSWQAVLSTLEAAFQ---QAGLPAAPASA 76 (305)
T ss_dssp CCEEEEEEECSSCEEEEEEET--TCC--EEEEEEESC-C--CG-GGC--HHHHHHHHHHHHHHHHH---HTTCCCCCGGG
T ss_pred CCEEEEEEcCccceEEEEEcC--CCC--EEEEEeCCC-C--Cc-ccC--HHHHHHHHHHHHHHHHH---hcCCChhhhcc
Confidence 347889999999999999974 454 343332210 0 00 111 34567777777776643 445543343
Q ss_pred --EEEeehhhhhcCChHHHHHHHHHHc--CCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEeeCCeE
Q 008139 90 --RAVATAAVRAAENKDEFVECVREKV--GFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKV 165 (576)
Q Consensus 90 --~~vATsAvR~A~N~~~fl~~i~~~t--G~~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~ 165 (576)
..++....-+..+... ++..+ +.+|.|.+.-.=|.+. .. . ..+.+++=+|.|+.-..+..+|++
T Consensus 77 ~~igig~pG~v~~~~~~~----l~~~~~~~~pv~v~NDa~aaa~g---e~---~--~~~~v~v~~GTGigg~~i~~~G~~ 144 (305)
T 1zc6_A 77 CAIGLGLSGVHNRQWAGE----FESQAPGFARLSLATDGYTTLLG---AH---G--GQPGIIVALGTGSIGEALYPDGSH 144 (305)
T ss_dssp EEEEEEESCCCTTSHHHH----HHHTCCCCSEEEEECHHHHHHHH---HT---T--TSSEEEEEESSSEEEEEECTTSCE
T ss_pred ceEEEEecCCCchHHHHH----HHHhCCCCceEEEECCHHHHHHh---hc---C--CCCeEEEEecCCeEEEEEeCCCcE
Confidence 5778887755554433 55667 7899998866655443 21 1 235788889999865555546665
Q ss_pred e
Q 008139 166 V 166 (576)
Q Consensus 166 ~ 166 (576)
.
T Consensus 145 ~ 145 (305)
T 1zc6_A 145 R 145 (305)
T ss_dssp E
T ss_pred E
Confidence 4
No 47
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=91.66 E-value=0.92 Score=50.16 Aligned_cols=110 Identities=16% Similarity=0.237 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHC-CCCcccEEEEeehhhhhcCChHHHHHHHHHHcCCcE-EEeChHHHHHHHHhhhhccCCCCCCce
Q 008139 68 SVESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQFLPVFDRLV 145 (576)
Q Consensus 68 ~~~~L~~f~~~~~~~-~v~~~~i~~vATsAvR~A~N~~~fl~~i~~~tG~~i-~vIsg~eEA~l~~~gv~~~l~~~~~~~ 145 (576)
.-..|+..++.++.+ |.+..++ +++-=|-=.. .....+..+-+..|+++ ++|+...-|-+.| |....- .+...
T Consensus 116 ~a~iL~~lk~~ae~~lg~~v~~~-VITVPa~f~~-~qr~a~~~Aa~~AGl~v~~li~EP~AAAlay-gl~~~~--~~~~v 190 (605)
T 4b9q_A 116 SAEVLKKMKKTAEDYLGEPVTEA-VITVPAYFND-AQRQATKDAGRIAGLEVKRIINEPTAAALAY-GLDKGT--GNRTI 190 (605)
T ss_dssp HHHHHHHHHHHHHHHHTSCCCEE-EEEECTTCCH-HHHHHHHHHHHHTTCEEEEEEEHHHHHHHHH-HTTSCC--SSEEE
T ss_pred HHHHHHHHHHHHHHHhCCCCCeE-EEEECCCCCH-HHHHHHHHHHHHcCCceEEEeCcHHHHHHHh-hhhccC--CCCEE
Confidence 345566677767665 5442222 2222221111 12233445555679986 5676666665554 433221 23558
Q ss_pred EEEEeCCCceeEEEeeCCe---------EeeEEeechhHHHHHHhh
Q 008139 146 LSVDIGGGSTEFVIGKRGK---------VVFCESVNLGHVSLSEKF 182 (576)
Q Consensus 146 lviDIGGGStEl~~~~~~~---------~~~~~SlplG~vrl~e~f 182 (576)
+|+|+|||++.+++++-+. +......++|.-.+.+.+
T Consensus 191 lV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l 236 (605)
T 4b9q_A 191 AVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRL 236 (605)
T ss_dssp EEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHH
T ss_pred EEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHH
Confidence 9999999999999887433 123345678887777644
No 48
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=91.62 E-value=0.63 Score=47.99 Aligned_cols=74 Identities=19% Similarity=0.296 Sum_probs=46.1
Q ss_pred HHHHHHHHcCCcEE-EeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEeeCC------eEe---eEEeechhH
Q 008139 106 FVECVREKVGFEVD-VLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRG------KVV---FCESVNLGH 175 (576)
Q Consensus 106 fl~~i~~~tG~~i~-vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~------~~~---~~~SlplG~ 175 (576)
.+.++-+..|+++. +++...=|-+.| +.... ..+...+|+|+|||+|.+++++.+ .+. ...+.++|.
T Consensus 153 ~~~~a~~~aGl~~~~li~Ep~Aaa~~~-~~~~~--~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG 229 (383)
T 1dkg_D 153 ATKDAGRIAGLEVKRIINEPTAAALAY-GLDKG--TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGG 229 (383)
T ss_dssp HHHHHHHHTTCEESCCCBHHHHHHHHH-TCCC---CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSH
T ss_pred HHHHHHHHcCCceEEEeccHHHHHHHH-HhccC--CCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCH
Confidence 33444566799865 444444443433 32211 123458999999999999998743 221 245679999
Q ss_pred HHHHHhh
Q 008139 176 VSLSEKF 182 (576)
Q Consensus 176 vrl~e~f 182 (576)
-.+.+.+
T Consensus 230 ~~id~~l 236 (383)
T 1dkg_D 230 EDFDSRL 236 (383)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887755
No 49
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=91.44 E-value=2.2 Score=41.67 Aligned_cols=128 Identities=16% Similarity=0.182 Sum_probs=68.1
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEEE-E
Q 008139 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRA-V 92 (576)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~-v 92 (576)
.+..||+||.++..+|.+ .++ +++.+... + +|.- ++. +.++|++..+ +.+.....+.. .
T Consensus 2 ~~lGID~GsT~tk~av~d--~~~--~il~~~~~--~-------~g~~-~e~---a~~vl~~~~~---~a~~~~~~~~~~a 61 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILK--NGE--DIVASETI--S-------SGTG-TTG---PSRVLEKLYG---KTGLAREDIKKVV 61 (276)
T ss_dssp EEEEEEECSSCEEEEEEE--TTT--EEEEEEEE--S-------CCTT-SSH---HHHHHHHHHH---HHCCCGGGEEEEE
T ss_pred eEEEEEcCccEEEEEEEE--CCC--eEEEEEEe--c-------CCCC-HHH---HHHHHHHHHH---HCCCcchhccccc
Confidence 367899999999988875 344 33432211 1 1221 222 2234444443 33554444444 4
Q ss_pred eehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEee-CCeEee---E
Q 008139 93 ATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGK-RGKVVF---C 168 (576)
Q Consensus 93 ATsAvR~A~N~~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~-~~~~~~---~ 168 (576)
+|.+-+.|- +.++..|+--+ |. .+|+....+ ....++|+|||.+.+++.. +|.+.. .
T Consensus 62 ~t~~~~~a~-------------~~~~~~Vne~~-ah--a~a~~~~~~---~~~~vl~lgG~~~~~~~~~~~g~~~~~~~~ 122 (276)
T 4ehu_A 62 VTGYGRMNY-------------SDADKQISELS-CH--ARGVNFIIP---ETRTIIDIGGQDAKVLKLDNNGRLLNFLMN 122 (276)
T ss_dssp EESTTGGGC-------------CSCSEECCHHH-HH--HHHHHHHST---TCCEEEEECSSCEEEEEECTTSCEEEEEEE
T ss_pred cCchHHHHh-------------hCCCcccchHH-HH--HHHHHHhCC---CCCeEEEEcCCCceEEEEEecCceEEEEeC
Confidence 466666653 44566776433 33 234333333 2358999999999988774 444432 2
Q ss_pred EeechhHHHHHH
Q 008139 169 ESVNLGHVSLSE 180 (576)
Q Consensus 169 ~SlplG~vrl~e 180 (576)
.+...|+-.+.+
T Consensus 123 ~~~~~g~G~f~d 134 (276)
T 4ehu_A 123 DKCAAGTGRFLD 134 (276)
T ss_dssp CSCSTTSHHHHH
T ss_pred CCcCcchhhHHH
Confidence 334455544433
No 50
>3irh_A HD domain protein; phosphohydrolase, dntpase, structural genomics, P protein structure initiative, midwest center for structural genomics; HET: DGT DTP; 2.40A {Enterococcus faecalis} PDB: 2o6i_A*
Probab=91.29 E-value=0.25 Score=52.68 Aligned_cols=67 Identities=18% Similarity=0.158 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccc--------cCCCCchhhhHHHHHc
Q 008139 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHF--------TSKKGYHKQSCHIIMN 430 (576)
Q Consensus 361 ~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~~--------I~~~~h~~Hs~yiI~n 430 (576)
.|+--|+.+|..+.+.+...+. .. .+....+++.++.++++||+|||||.. +-..+|-..|..||.+
T Consensus 89 ~HSLgV~~la~~i~~~l~~~~~--~~-~~~~~~~~~~~~~~v~~AaLlHDIGH~PFsH~~E~~~~~~HE~~s~~ii~~ 163 (480)
T 3irh_A 89 SHSLGVYEITRRICEIFQRNYS--VE-RLGENGWNDDERLITLCAALLHDVGHGPYSHTFEHIFDTNHEAITVQIITS 163 (480)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSB--HH-HHGGGSBCGGGHHHHHHHHHHTTTTCCTTHHHHHHHHCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHhhCc--cc-cccccCCCHHHHHHHHHHHHHhccCCCCccchhhhccCCCHHHHHHHHHHc
Confidence 7999999999999998864321 00 000002455677899999999999975 1134566777777765
No 51
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=91.11 E-value=1.7 Score=48.60 Aligned_cols=112 Identities=18% Similarity=0.270 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHC-CCCcccEEEEeehhhhhcCChHHHHHHHHHHcCCcE-EEeChHHHHHHHHhhhhc-cCC---CC
Q 008139 68 SVESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQ-FLP---VF 141 (576)
Q Consensus 68 ~~~~L~~f~~~~~~~-~v~~~~i~~vATsAvR~A~N~~~fl~~i~~~tG~~i-~vIsg~eEA~l~~~gv~~-~l~---~~ 141 (576)
.-..|+..++.++.+ |-+..++ +++--|.=....++.+.+ +-+..|+++ ++|+...=|-+.| |... .++ ..
T Consensus 119 ~a~~L~~lk~~ae~~lg~~v~~~-VITVPa~f~~~qR~a~~~-Aa~~AGl~~~~li~EP~AAAlay-gl~~~~~~~~~~~ 195 (675)
T 3d2f_A 119 AAMFIDKVKDTVKQDTKANITDV-CIAVPPWYTEEQRYNIAD-AARIAGLNPVRIVNDVTAAGVSY-GIFKTDLPEGEEK 195 (675)
T ss_dssp HHHHHHHHHHHHHHHHCSCCCEE-EEEECTTCCHHHHHHHHH-HHHHTTCEEEEEEEHHHHHHHHH-HHHCSCCCCSSSC
T ss_pred HHHHHHHHHHHHHHHhCCCcceE-EEEECCCCCHHHHHHHHH-HHHHcCCceEEEEcchHHHHHHH-hhhccccccccCC
Confidence 344566666665543 4322222 222222111112333444 445679996 5666555555555 5433 222 12
Q ss_pred CCceEEEEeCCCceeEEEee--CCeE-eeE--EeechhHHHHHHhh
Q 008139 142 DRLVLSVDIGGGSTEFVIGK--RGKV-VFC--ESVNLGHVSLSEKF 182 (576)
Q Consensus 142 ~~~~lviDIGGGStEl~~~~--~~~~-~~~--~SlplG~vrl~e~f 182 (576)
+...+|+|+|||+|.+++++ +|.+ +.+ ...++|.-.+.+.+
T Consensus 196 ~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l 241 (675)
T 3d2f_A 196 PRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAI 241 (675)
T ss_dssp CEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred CcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHH
Confidence 34589999999999999986 6665 222 34789988776643
No 52
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=90.94 E-value=0.14 Score=53.58 Aligned_cols=85 Identities=15% Similarity=0.155 Sum_probs=32.8
Q ss_pred EEEeeh-hhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEeeCCeEee-
Q 008139 90 RAVATA-AVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVF- 167 (576)
Q Consensus 90 ~~vATs-AvR~A~N~~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~- 167 (576)
.++-|. +.-...|++...+.+.+..|++. +.=-.|+-++.+|.- ...++|+|||+|.|.++.+.+|.+..
T Consensus 106 ~vllt~p~~~~~~~r~~~~e~~fe~~~~~~--~~~~~~~~~a~~a~g------~~~~lVVDiG~g~T~v~pv~~G~~~~~ 177 (394)
T 1k8k_B 106 KILLTEPPMNPTKNREKIVEVMFETYQFSG--VYVAIQAVLTLYAQG------LLTGVVVDSGDGVTHICPVYEGFSLPH 177 (394)
T ss_dssp --------------------------------------------------------CCEEEECSSCEEEECEETTEECST
T ss_pred cEEEEECCCCCHHHHHHHHHHhhhccCCCe--EEEEhhHHHHHHhCC------CceEEEEEcCCCceEeeeeECCEEccc
Confidence 344443 44445677777777777767653 222344444444321 23479999999999999999998876
Q ss_pred -EEeechhHHHHHHhh
Q 008139 168 -CESVNLGHVSLSEKF 182 (576)
Q Consensus 168 -~~SlplG~vrl~e~f 182 (576)
..++|+|.-.+++.+
T Consensus 178 ~~~~~~~GG~~lt~~l 193 (394)
T 1k8k_B 178 LTRRLDIAGRDITRYL 193 (394)
T ss_dssp TCEEESCCHHHHHHHH
T ss_pred ceEEeeccHHHHHHHH
Confidence 578999988777643
No 53
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=90.74 E-value=0.25 Score=49.91 Aligned_cols=96 Identities=16% Similarity=0.149 Sum_probs=58.6
Q ss_pred CCCcccEEEEeehhhhh------cCChHHHHHHHHHHc-------C-----CcEEEeChHHHHHHHHhhhhccCCCCCCc
Q 008139 83 NISRDHTRAVATAAVRA------AENKDEFVECVREKV-------G-----FEVDVLTGEQEAKFVYMGVLQFLPVFDRL 144 (576)
Q Consensus 83 ~v~~~~i~~vATsAvR~------A~N~~~fl~~i~~~t-------G-----~~i~vIsg~eEA~l~~~gv~~~l~~~~~~ 144 (576)
+.+...+.+|.+--+.. .+|.+.+-++.+... | -+++++...-=|.+.+. .... .+..
T Consensus 90 ~~~~~~~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e~~aa~~~~~---~~~~-~~~~ 165 (320)
T 2zgy_A 90 GLPVSEVDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPESIPAGYEVL---QELD-ELDS 165 (320)
T ss_dssp SCCSCEEEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEESSHHHHHHHH---HHSC-TTCE
T ss_pred CCCCceEEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecCcHHHHHhhh---cccc-CCCC
Confidence 44333466566655542 235566665543211 1 14555665555555443 2221 2345
Q ss_pred eEEEEeCCCceeEEEeeCCeE-ee--EEeechhHHHHHHhh
Q 008139 145 VLSVDIGGGSTEFVIGKRGKV-VF--CESVNLGHVSLSEKF 182 (576)
Q Consensus 145 ~lviDIGGGStEl~~~~~~~~-~~--~~SlplG~vrl~e~f 182 (576)
.+++|||||.|.++++++|.+ +. +.+.++|.-.+++..
T Consensus 166 ~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I 206 (320)
T 2zgy_A 166 LLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAV 206 (320)
T ss_dssp EEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHH
T ss_pred EEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHH
Confidence 899999999999999998865 33 578999998888753
No 54
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=90.60 E-value=7.3 Score=38.68 Aligned_cols=128 Identities=13% Similarity=0.095 Sum_probs=73.1
Q ss_pred CCceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEE
Q 008139 11 PQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR 90 (576)
Q Consensus 11 ~~~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~ 90 (576)
.+.....|||||.++++++.+ ++.+ ++. + +. .+.++++++.| +.-.+ ..
T Consensus 18 ~~~~~iGIDiGsTt~K~V~~~---~~~i--~~~-~---------~~-----~~~~~~~l~~l-------~~~~~----~~ 66 (287)
T 2ews_A 18 GSHMKVGIDAGGTLIKIVQEQ---DNQR--TFK-T---------EL-----TKNIDQVVEWL-------NQQQI----EK 66 (287)
T ss_dssp ---CEEEEEECSSEEEEEEEC---SSCE--EEE-E---------EE-----GGGHHHHHHHH-------HTSCC----SE
T ss_pred CCCeEEEEEEChhhEEEEEEc---CCEE--EEE-E---------ec-----hHHHHHHHHHh-------cccCc----eE
Confidence 344679999999999999972 3432 221 1 11 11244443333 21122 24
Q ss_pred EEeehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCC---CCCceEEEEeCCCceeEEEeeCCeEee
Q 008139 91 AVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPV---FDRLVLSVDIGGGSTEFVIGKRGKVVF 167 (576)
Q Consensus 91 ~vATsAvR~A~N~~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~l~~---~~~~~lviDIGGGStEl~~~~~~~~~~ 167 (576)
+++|--=|. .| . ...|++...++ |-.-...|+..-.+. +-.+.+++|||||-. ++.++++....
T Consensus 67 i~~TG~G~~-----~~-~---~~l~~~~~~v~---Ei~~~~~Ga~~l~~~~~~~~~~~~vIdIGg~ds-ii~v~~~~f~r 133 (287)
T 2ews_A 67 LCLTGGNAG-----VI-A---ENINIPAQIFV---EFDAASQGLGILLKEQGHDLADYIFANVGTGTS-LHYFDGQSQRR 133 (287)
T ss_dssp EEEESTTHH-----HH-H---TTSSSCCEECC---HHHHHHHHHHHHHHHTTCCCSCEEEEEESSSEE-EEEECSSCEEE
T ss_pred EEEEChhHH-----hH-h---HhhCCCcceee---hhHHHHHHHHHhcccCCCCcCCeEEEEeCCCeE-EEEEcCCceEE
Confidence 577764332 11 1 14677766644 443334444432221 112479999999988 99998777776
Q ss_pred EEeechhHHHHHHhh
Q 008139 168 CESVNLGHVSLSEKF 182 (576)
Q Consensus 168 ~~SlplG~vrl~e~f 182 (576)
.---..|.-++-+..
T Consensus 134 ~~g~aaGgGtFl~l~ 148 (287)
T 2ews_A 134 VGGIGTGGGMIQGLG 148 (287)
T ss_dssp EEEESCSHHHHHHHH
T ss_pred cCccccchhhHHHHH
Confidence 666788888887754
No 55
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=88.67 E-value=3.3 Score=45.28 Aligned_cols=110 Identities=18% Similarity=0.177 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHH-HH-HHCCCCccc---EEEE-eehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccC
Q 008139 65 QARSVESLLMFRD-II-QSHNISRDH---TRAV-ATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFL 138 (576)
Q Consensus 65 i~r~~~~L~~f~~-~~-~~~~v~~~~---i~~v-ATsAvR~A~N~~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~l 138 (576)
+....+.+..+-+ .+ +..++++.+ ..++ ....+-.-.|++.+++-+.+..|++-=-+. .++-++.+|.-
T Consensus 170 ~~~~wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~--~~~vla~ya~G--- 244 (593)
T 4fo0_A 170 LTAVLADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVH--QESVCATYGSG--- 244 (593)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEE--EHHHHHHHHHT---
T ss_pred hhcCHHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEee--chHHHHHHHCC---
Confidence 3444455554322 22 456776543 2334 444555667888999999998888743332 35666665532
Q ss_pred CCCCCceEEEEeCCCceeEEEeeCCeEe--eEEeechhHHHHHHhh
Q 008139 139 PVFDRLVLSVDIGGGSTEFVIGKRGKVV--FCESVNLGHVSLSEKF 182 (576)
Q Consensus 139 ~~~~~~~lviDIGGGStEl~~~~~~~~~--~~~SlplG~vrl~e~f 182 (576)
...++|||+|-+.|-++-+.+|.+. ....+++|.-.+++.+
T Consensus 245 ---~~tglVVDiG~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L 287 (593)
T 4fo0_A 245 ---LSSTCIVDVGDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCF 287 (593)
T ss_dssp ---CSEEEEEEECSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHH
T ss_pred ---CCceEEEEeCCCceeeeeeECCEEehhheEEecccHHHHHHHH
Confidence 2348999999999999999999876 4578899998888865
No 56
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=88.39 E-value=5.3 Score=40.23 Aligned_cols=140 Identities=13% Similarity=0.145 Sum_probs=84.4
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcc---cEE
Q 008139 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRD---HTR 90 (576)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~---~i~ 90 (576)
.+..||+|..+++..+++. +|. ++.+.+... ......+ .++.++...++++++.+. .+++.. .-.
T Consensus 7 ~~lgiDiGgt~~~~~l~d~--~g~--i~~~~~~~~---~~~~~~~--~~~~~~~i~~~i~~~~~~---~~~~~~~~i~gi 74 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSE--DGK--ILAEADGLS---TNHWLIG--TDKCVERINEMVNRAKRK---AGVDPLVPLRSL 74 (347)
T ss_dssp EEEEEEECTTCEEEEEEET--TSC--EEEEEEECC---CCHHHHC--HHHHHHHHHHHHHHHHHH---HTCCTTCCBSEE
T ss_pred EEEEEEcCccceEEEEEeC--CCC--EEEEEeCCC---CCcccCC--HHHHHHHHHHHHHHHHHh---cCCCcccceeEE
Confidence 6789999999999999975 354 333332210 0000000 245567777777776543 343322 235
Q ss_pred EEeehhhhhcCChHHHHHHHHHHcC---CcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEeeCCeEee
Q 008139 91 AVATAAVRAAENKDEFVECVREKVG---FEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVF 167 (576)
Q Consensus 91 ~vATsAvR~A~N~~~fl~~i~~~tG---~~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~ 167 (576)
++|....-+..+...+.+.+++.+| .+|.|.+.-.=|-+.+ . . ++++++=+|.|+--..+..+|....
T Consensus 75 gi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~----~--~---~~~v~v~~GTGig~~~v~~~G~~c~ 145 (347)
T 2ch5_A 75 GLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA----T--P---DGGVVLISGTGSNCRLINPDGSESG 145 (347)
T ss_dssp EEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH----C--S---SCEEEEEESSSEEEEEECTTSCEEE
T ss_pred EEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh----C--C---CCcEEEEEcCCceeEEEcCCCCEEe
Confidence 6778776554445577788889997 8999988665555542 1 1 3478888899987766655665443
Q ss_pred EEeechhHH
Q 008139 168 CESVNLGHV 176 (576)
Q Consensus 168 ~~SlplG~v 176 (576)
. =..||+
T Consensus 146 c--G~~G~l 152 (347)
T 2ch5_A 146 C--GGWGHM 152 (347)
T ss_dssp E--ECCCTT
T ss_pred c--CCcCcc
Confidence 2 234554
No 57
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=88.20 E-value=8.5 Score=39.51 Aligned_cols=134 Identities=15% Similarity=0.087 Sum_probs=82.7
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHH--CCCCcccEE
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQS--HNISRDHTR 90 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~--~~v~~~~i~ 90 (576)
..+..||||.+++++.+++. +|. ++.+.+.++.. . .=.++.++...++++++.+.... ..+ .-.
T Consensus 87 ~~~lGIDiGgt~i~~~l~d~--~G~--vl~~~~~~~~~--~-----~~~~~~~~~l~~~i~~~~~~~~~~~~~i---~gi 152 (380)
T 2hoe_A 87 AYVLGIEVTRDEIAACLIDA--SMN--ILAHEAHPLPS--Q-----SDREETLNVMYRIIDRAKDMMEKLGSKL---SAL 152 (380)
T ss_dssp CEEEEEEECSSEEEEEEEET--TCC--EEEEEEEECCS--S-----CCHHHHHHHHHHHHHHHHHHHHHTTCCC---CEE
T ss_pred CeEEEEEECCCEEEEEEECC--CCC--EEEEEEEccCC--C-----CCHHHHHHHHHHHHHHHHHhcCCCcCcE---EEE
Confidence 46789999999999999976 354 34433333211 0 01355677777888877654432 122 234
Q ss_pred EEeehhhhhcC--------C----hHHHHHHHHHHcCCcEEEeChHHHHHHHHh--hhhccCCCCCCceEEEEeCCCcee
Q 008139 91 AVATAAVRAAE--------N----KDEFVECVREKVGFEVDVLTGEQEAKFVYM--GVLQFLPVFDRLVLSVDIGGGSTE 156 (576)
Q Consensus 91 ~vATsAvR~A~--------N----~~~fl~~i~~~tG~~i~vIsg~eEA~l~~~--gv~~~l~~~~~~~lviDIGGGStE 156 (576)
+||....=+.. | .-.+.+.+++++|++|.|.+.-.=|-+.-. |.. . ++.+++-+|.| +-
T Consensus 153 gi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~~g~~-----~-~~~v~l~~GtG-iG 225 (380)
T 2hoe_A 153 TVAAPGPIDTERGIIIDPRNFPLSQIPLANLLKEKYGIEVWVENDADMGAVGEKWYTKR-----D-DSFAWILTGKG-IG 225 (380)
T ss_dssp EEEESSCEETTTTEECCCSSCTTBTSCHHHHHHHHHCSEEEEEEHHHHHHHHHHHHTTC-----C-SCEEEEEESSS-CE
T ss_pred EEEeeccEECCCCEEeccCCCCCcCCChHHHHHHHhCCCEEEechHHHHHHHHHHhCCC-----C-CcEEEEEeCCc-eE
Confidence 56666543322 2 135678888899999999887655544422 221 1 45899999988 55
Q ss_pred EEEeeCCeEee
Q 008139 157 FVIGKRGKVVF 167 (576)
Q Consensus 157 l~~~~~~~~~~ 167 (576)
..++-+|++..
T Consensus 226 ~giv~~G~l~~ 236 (380)
T 2hoe_A 226 AGIIIDGELYR 236 (380)
T ss_dssp EEEEETTEECC
T ss_pred EEEEECCEEec
Confidence 66667777654
No 58
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=88.15 E-value=0.95 Score=50.03 Aligned_cols=158 Identities=16% Similarity=0.229 Sum_probs=85.7
Q ss_pred EEEEecccceEEEEEEEeCCCC-EEEEEeeeeeeeeccCCCcC------CCCCHHHHHH-HHHHHHH-HHHHHHHCCCCc
Q 008139 16 ASIDMGTSSFKLLIIRAYPNGK-FLTIDTLKQPVILGRDLSSS------CSISTQSQAR-SVESLLM-FRDIIQSHNISR 86 (576)
Q Consensus 16 AvIDIGSNsirL~I~e~~~~~~-~~~l~~~k~~vrLg~~~~~~------g~Ls~e~i~r-~~~~L~~-f~~~~~~~~v~~ 86 (576)
-+|||||.++....+++. +|. +......+-.++.|+++-.. +.=..+.+.+ .+++|.+ +.+++++.++++
T Consensus 209 lAvDiGTTtv~~~LvdL~-tG~~l~~~~~~NpQ~~~G~DVisRI~~a~~~~~g~~~L~~~v~~~in~li~~l~~~~~i~~ 287 (631)
T 3zyy_X 209 LAIDIGTTTVVVQLVDLV-SGKVLGTKGNYNKQAAFGDDVISRIIYVDENPDGAEKLRKAVLSTINELIFQLCKEHGVEK 287 (631)
T ss_dssp EEEEECSSEEEEEEEETT-TCCEEEEEEEECGGGGTCSSHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHHTCCG
T ss_pred EEEEecccceeEEEEECC-CCCEEEeecccCCCCCcchHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 589999999999999986 565 33444556667888887421 0101122333 3444544 455667778876
Q ss_pred ccE---EEEeehhh------------hhcCChHHHHHHH---HHHcCCc------EEEe---ChHHHHHHHHhhhhccCC
Q 008139 87 DHT---RAVATAAV------------RAAENKDEFVECV---REKVGFE------VDVL---TGEQEAKFVYMGVLQFLP 139 (576)
Q Consensus 87 ~~i---~~vATsAv------------R~A~N~~~fl~~i---~~~tG~~------i~vI---sg~eEA~l~~~gv~~~l~ 139 (576)
.+| .++|-.++ +.|.=...|.+.. ..++|++ |-++ +|.-=|-...--+...+.
T Consensus 288 ~~I~~~~v~GNt~M~hLllgi~p~~L~~~Py~p~~~~~~~~~a~~lgl~~~p~~~v~~lP~i~~~VGaDi~Ag~la~~~~ 367 (631)
T 3zyy_X 288 KEIMAAVVAGNTTMTHLFLEIDPRYIRLEPYTPAALFIPPVPATEAKIEMNPKGFVYIMPNVASYVGGDITSGVLYTGLA 367 (631)
T ss_dssp GGEEEEEEEECHHHHHHHHTCCCGGGSSTTTCCSCSCCCCEEHHHHTCSSCTTSEEEECCCCBTTBCHHHHHHHHHHTTT
T ss_pred HHeeEEEEEccHHHHHHHcCCChHHhccCCcccccCCCceecHHHcCCCcCCCCEEEEcCcccccccHHHHHHHHhcCcc
Confidence 654 34444443 2221111110000 1234553 3332 322111111111112232
Q ss_pred CCCCceEEEEeCCCceeEEEeeCCeEeeEEeechhHH
Q 008139 140 VFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHV 176 (576)
Q Consensus 140 ~~~~~~lviDIGGGStEl~~~~~~~~~~~~SlplG~v 176 (576)
..++..|++|||. +.|+++++++++. +.|-+-|+.
T Consensus 368 ~~~~~~L~iDiGT-NgEivL~~~~~l~-~~S~aAGPA 402 (631)
T 3zyy_X 368 NSDEITLFIDIGT-NGEMVLGNKDWLV-TCACSAGPA 402 (631)
T ss_dssp SCSSCEEEEECSS-EEEEEEECSSCEE-EEEEECCGG
T ss_pred cCCCCEEEEEcCC-CeEEEEeeCCEEE-EEeccCchh
Confidence 3345689999987 7899999877764 668899984
No 59
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=87.97 E-value=1.8 Score=47.82 Aligned_cols=109 Identities=16% Similarity=0.231 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHC-CCCcccEEEEeehhhhhcCChHHHHHHHHHHcCCcEE-EeChHHHHHHHHhhhhccCCCCCCceE
Q 008139 69 VESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVD-VLTGEQEAKFVYMGVLQFLPVFDRLVL 146 (576)
Q Consensus 69 ~~~L~~f~~~~~~~-~v~~~~i~~vATsAvR~A~N~~~fl~~i~~~tG~~i~-vIsg~eEA~l~~~gv~~~l~~~~~~~l 146 (576)
...|+..++.++.| +.+..++ +++--|.=. ......+..+-+..|+++. +|+...=|-+.| |.-.. ..+...+
T Consensus 117 a~~L~~l~~~ae~~l~~~v~~~-VitVPa~f~-d~qr~a~~~A~~~AGl~v~~li~EP~AAAlay-~l~~~--~~~~~vl 191 (605)
T 2kho_A 117 AEVLKKMKKTAEDYLGEPVTEA-VITVPAYFN-DAQRQATKDAGRIAGLEVKRIINEPTAAALAY-GLDKG--TGNRTIA 191 (605)
T ss_dssp HHHHHHHHHHHHHHHCSCCCEE-EEEECTTCC-HHHHHHHHHHHHTTTCEEEEEEEHHHHHHHHT-TTTSS--SSEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCcEE-EEEECCCCC-HHHHHHHHHHHHHcCCceEEEecCHHHHHHHh-hhccc--CCCCEEE
Confidence 34566666666554 4332222 222222111 1122333344456799964 566555555544 43221 1234589
Q ss_pred EEEeCCCceeEEEeeC------CeEe---eEEeechhHHHHHHhh
Q 008139 147 SVDIGGGSTEFVIGKR------GKVV---FCESVNLGHVSLSEKF 182 (576)
Q Consensus 147 viDIGGGStEl~~~~~------~~~~---~~~SlplG~vrl~e~f 182 (576)
|+|+|||+|.+++++- +.+. .....++|.-.+.+.+
T Consensus 192 V~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l 236 (605)
T 2kho_A 192 VYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRL 236 (605)
T ss_dssp EEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHH
T ss_pred EEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHH
Confidence 9999999999999873 4332 2445688876665543
No 60
>2dqb_A Deoxyguanosinetriphosphate triphosphohydrolase, P; dntpase, DNTP, single-stranded DNA, DNA dGTPase, HD superfamily, structural genomics; 2.20A {Thermus thermophilus}
Probab=87.90 E-value=1.1 Score=46.38 Aligned_cols=52 Identities=23% Similarity=0.309 Sum_probs=38.5
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccc---------c-------CCCCchhhh
Q 008139 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHF---------T-------SKKGYHKQS 424 (576)
Q Consensus 361 ~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~~---------I-------~~~~h~~Hs 424 (576)
.|+--|+.+|..|...|. + + ..++++||+|||||.. + ....|..+|
T Consensus 78 ~HSl~Va~iar~ia~~l~----l-----------~---~~l~~~a~LlHDiGh~PFgH~~E~~l~~~~~~~ggf~Hn~~s 139 (376)
T 2dqb_A 78 THTLEVAQVSRSIARALG----L-----------N---EDLTEAIALSHDLGHPPFGHTGEHVLNALMQDHGGFEHNAQA 139 (376)
T ss_dssp HHHHHHHHHHHHHHHHTT----C-----------C---HHHHHHHHHHTTTTCCSSTTHHHHHHHHHTTTTTCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHcC----C-----------C---HHHHHHHHHHHhcCCCccccchHHHHHHHhhccCCCcHHHHH
Confidence 699999999998765542 2 2 2689999999999975 1 224677777
Q ss_pred HHHHHc
Q 008139 425 CHIIMN 430 (576)
Q Consensus 425 ~yiI~n 430 (576)
+.++..
T Consensus 140 ~ril~~ 145 (376)
T 2dqb_A 140 LRILTH 145 (376)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 777765
No 61
>1vqr_A Hypothetical protein CJ0248; HD-domain/pdease-like fold, structural genomics, joint cente structural genomics, JCSG; 2.25A {Campylobacter jejuni subsp} SCOP: a.211.1.3
Probab=87.34 E-value=0.91 Score=45.30 Aligned_cols=38 Identities=16% Similarity=0.163 Sum_probs=26.6
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhccccc
Q 008139 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT 415 (576)
Q Consensus 361 ~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~~I 415 (576)
.|+..|+.+|..+-..+ + ..+...+..|++|||||+.+
T Consensus 127 ~hs~~va~~a~~la~~~----~-------------~~~~e~a~~aGLLHDIGkl~ 164 (297)
T 1vqr_A 127 KTCNEEATFIANWLNDE----D-------------KKLSHLLVPCAMLLRLGIVI 164 (297)
T ss_dssp HHHHHHHHHHHHHHTTT----C-------------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc----c-------------CCCHHHHHHHHHHHHccHHH
Confidence 58888888888653221 1 12345788999999999876
No 62
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=87.30 E-value=2.2 Score=44.92 Aligned_cols=100 Identities=15% Similarity=0.080 Sum_probs=67.2
Q ss_pred HCCCCcccEEEEeehhhh-hcCChHHHHHHHHHHcCCc-EEEeChHHHHHHHHhhhhccCCC--CCCceEEEEeCCCcee
Q 008139 81 SHNISRDHTRAVATAAVR-AAENKDEFVECVREKVGFE-VDVLTGEQEAKFVYMGVLQFLPV--FDRLVLSVDIGGGSTE 156 (576)
Q Consensus 81 ~~~v~~~~i~~vATsAvR-~A~N~~~fl~~i~~~tG~~-i~vIsg~eEA~l~~~gv~~~l~~--~~~~~lviDIGGGStE 156 (576)
..++++.+-.++-|.+.- -..|++...+-+.+..|++ +-++ .++-++.+|.-..... ....++|+|+|+|.|.
T Consensus 116 ~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~---~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~ 192 (427)
T 3dwl_A 116 YLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIA---VQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTH 192 (427)
T ss_dssp TSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEE---EHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEE
T ss_pred hhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeec---chHHHHHHhcCCcccccCCCceEEEEECCCCceE
Confidence 456655444566666443 3356667777777778887 3444 4566666554311101 1245899999999999
Q ss_pred EEEeeCCeEee--EEeechhHHHHHHhhc
Q 008139 157 FVIGKRGKVVF--CESVNLGHVSLSEKFG 183 (576)
Q Consensus 157 l~~~~~~~~~~--~~SlplG~vrl~e~f~ 183 (576)
++.+-+|.+.. ..++++|.-.+++.+.
T Consensus 193 v~PV~~G~~l~~~~~rl~~gG~~lt~~L~ 221 (427)
T 3dwl_A 193 IIPVAEGYVIGSSIKTMPLAGRDVTYFVQ 221 (427)
T ss_dssp EEEEETTEECGGGCEEESCCHHHHHHHHH
T ss_pred EEEEECCEEehhhheeccccHHHHHHHHH
Confidence 99999998886 5789999998888553
No 63
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=85.94 E-value=11 Score=39.50 Aligned_cols=135 Identities=15% Similarity=0.099 Sum_probs=83.7
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEE--
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR-- 90 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~-- 90 (576)
..+..||||.+++++.+++. +|. ++.+.+.++. ..+ .++.++.+.+++++|.+ +.+++..++.
T Consensus 108 ~~~lGIDiGgt~i~~~l~d~--~G~--il~~~~~~~~------~~~--~~~~~~~l~~~i~~~~~---~~~~~~~~i~gi 172 (429)
T 1z05_A 108 WQFLSMRLGRGYLTIALHEL--GGE--VLIDTKIDIH------EID--QDDVLARLLFEIEEFFQ---TYAAQLDRVTSI 172 (429)
T ss_dssp EEEEEEEEETTEEEEEEEET--TSC--EEEEEEEECC------CCB--HHHHHHHHHHHHHHHHH---HTTTTCCEEEEE
T ss_pred CEEEEEEECCCEEEEEEECC--CCC--EEEEEEEcCC------CCC--HHHHHHHHHHHHHHHHH---hcCCCcCceEEE
Confidence 46789999999999999975 354 3443333321 111 35567777777777654 4455433443
Q ss_pred EEeehhhhh--------cCC----hHHHHHHHHHHcCCcEEEeChHHHHHHHH--hhhhccCCCCCCceEEEEeCCCcee
Q 008139 91 AVATAAVRA--------AEN----KDEFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVLSVDIGGGSTE 156 (576)
Q Consensus 91 ~vATsAvR~--------A~N----~~~fl~~i~~~tG~~i~vIsg~eEA~l~~--~gv~~~l~~~~~~~lviDIGGGStE 156 (576)
+||....=+ +.| .-.+.+.+++++|++|.|.+.-.=|-+.- .|... ..++.+++-+|.| +-
T Consensus 173 gi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~L~~~~~~pV~v~NDa~aaalaE~~~g~~~----~~~~~v~l~~GtG-iG 247 (429)
T 1z05_A 173 AITLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKATGLPVFVANDTRAWALAEKLFGHSQ----DVDNSVLISIHHG-LG 247 (429)
T ss_dssp EEEESSEEETTTTEEEECSSSBCSSBCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTT----TCSSEEEEEESSS-EE
T ss_pred EEeccCcEeCCCCeEeecCCCCCCCCCHHHHHHHHhCCCEEEechhHHHHHHHHHhCCCC----CCCcEEEEEECCc-EE
Confidence 345554422 222 13567888899999999988766555542 22221 2345899999998 55
Q ss_pred EEEeeCCeEee
Q 008139 157 FVIGKRGKVVF 167 (576)
Q Consensus 157 l~~~~~~~~~~ 167 (576)
..++-+|++..
T Consensus 248 ~giv~~G~l~~ 258 (429)
T 1z05_A 248 AGIVLDGRVLQ 258 (429)
T ss_dssp EEEEETTEECC
T ss_pred EEEEECCEEee
Confidence 66777777654
No 64
>3i7a_A Putative metal-dependent phosphohydrolase; YP_926882.1, STRU genomics, joint center for structural genomics, JCSG; 2.06A {Shewanella amazonensis SB2B}
Probab=85.37 E-value=1.9 Score=42.51 Aligned_cols=98 Identities=12% Similarity=0.093 Sum_probs=58.7
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccC---------------------CCC
Q 008139 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTS---------------------KKG 419 (576)
Q Consensus 361 ~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~~I~---------------------~~~ 419 (576)
.|+..|+.+|..|-..+....+++ ..+...+..|++|||||...= ...
T Consensus 120 ~hs~~vA~~a~~la~~~~~~~~~~-----------~~~~~~~~laGLLHdiGkl~l~~~~~~~~~~l~~~~~~~~~~~~~ 188 (281)
T 3i7a_A 120 RTSIDVTAAACSLLQIYNKKHPGS-----------GLNYDTLTLAGLVHNIGALPVLTEAEAHPEMFTTIEHLRSLVRKM 188 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTC-----------CCCHHHHHHHHHHTTTTHHHHHHHHHHCGGGCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhccccC-----------CCCHHHHHHHHHHHHCCHHHHHHhHHhhHHHhcChHHHHHHHhCc
Confidence 689999999988765553322221 123356889999999998531 124
Q ss_pred chhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCCchhhccCChHHHHHHHHHHHHHHHHHHhccc
Q 008139 420 YHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQN 491 (576)
Q Consensus 420 h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~ryhrk~~~~~~~~~~~~L~~~~~~~v~kL~~iLRlA~~Ld~s 491 (576)
|..-+++++.+-+ |.. .+..+++||....... + ...++.++++|+.+...
T Consensus 189 H~~iGa~ll~~w~----lp~----~i~~ai~~Hh~~~~~~--~------------~~~~~~iV~lAd~~~~~ 238 (281)
T 3i7a_A 189 QGPIGRAVLKSWD----FAP----EVMEVVERWADLPYLG--D------------HVSYLDFIRAAAFYTGE 238 (281)
T ss_dssp HHHHHHHHHHHTT----CCH----HHHHHHHHTTCTTCCC--S------------SCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHCC----CCH----HHHHHHHHHcChhhcC--C------------cCCHHHHHHHHHHHcCC
Confidence 6677778776653 332 4455666665432210 0 01246688888887643
No 65
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=84.93 E-value=3.4 Score=44.65 Aligned_cols=86 Identities=16% Similarity=0.209 Sum_probs=48.1
Q ss_pred ccccccCCCceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCHH-HHHHHHHHHHHHHHHHH
Q 008139 4 NTSYMQIPQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQ-SQARSVESLLMFRDIIQ 80 (576)
Q Consensus 4 ~~~~~~~~~~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~--Ls~e-~i~r~~~~L~~f~~~~~ 80 (576)
|--|..|..+.+.+||+|+.|+|..+++. +|.. +...+.++.. ...+.|. -.++ -.+.++++++ ++++
T Consensus 17 ~~~~~~MM~~~~lgIDiGtts~k~~l~d~--~G~i--l~~~~~~~~~--~~p~~g~~e~dp~~~~~~i~~~i~---~~~~ 87 (520)
T 4e1j_A 17 NLYFQSMMGGYILAIDQGTTSTRAIVFDG--NQKI--AGVGQKEFKQ--HFPKSGWVEHDPEEIWQTVVSTVK---EAIE 87 (520)
T ss_dssp TCCCCCCCSCEEEEEEECSSEEEEEEECT--TSCE--EEEEEEECCC--BCSSTTCCEECHHHHHHHHHHHHH---HHHH
T ss_pred hHHHHHHhhCeEEEEEeCCcceEEEEECC--CCCE--EEEEEEeccc--ccCCCCcEEECHHHHHHHHHHHHH---HHHH
Confidence 33343444568899999999999999974 4543 4433333221 1112222 2233 3344444444 4455
Q ss_pred HCCCCcccEEEEeehhhh
Q 008139 81 SHNISRDHTRAVATAAVR 98 (576)
Q Consensus 81 ~~~v~~~~i~~vATsAvR 98 (576)
+.+++..+|.+|+-++-+
T Consensus 88 ~~~~~~~~I~~Igis~~g 105 (520)
T 4e1j_A 88 KSGITANDIAAIGITNQR 105 (520)
T ss_dssp TTTCCGGGEEEEEEEECS
T ss_pred hcCCCcccEEEEEEeCCc
Confidence 667766678887755543
No 66
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=84.62 E-value=6.3 Score=39.42 Aligned_cols=131 Identities=17% Similarity=0.204 Sum_probs=81.0
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEEEE
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (576)
+.+..||||..++++.+++. +|. ++.+.+.++ ..+ .++.++.+.+.++++.+ .+.+ .-..+
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~--~G~--i~~~~~~~~-------~~~--~~~~~~~i~~~i~~~~~---~~~i---~gigi 62 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDE--EGR--ILSTFKVAT-------PPT--AEGIVDAICAAVAGASE---GHDV---EAVGI 62 (321)
T ss_dssp CEEEEEEECSSEEEEEEECT--TCC--BCCCEEEEC-------CSS--HHHHHHHHHHHHHHHHT---TCCE---EEEEE
T ss_pred cEEEEEEECCCEEEEEEECC--CCC--EEEEEEeeC-------CCC--HHHHHHHHHHHHHHHHh---hcCc---eEEEE
Confidence 35789999999999999965 343 344443333 111 24455555555655532 2332 23455
Q ss_pred eehhhhhc--------CC----hHHHHHHHHHHcCCcEEEeChHHHHHHHHh--hhhccCCCCCCceEEEEeCCCceeEE
Q 008139 93 ATAAVRAA--------EN----KDEFVECVREKVGFEVDVLTGEQEAKFVYM--GVLQFLPVFDRLVLSVDIGGGSTEFV 158 (576)
Q Consensus 93 ATsAvR~A--------~N----~~~fl~~i~~~tG~~i~vIsg~eEA~l~~~--gv~~~l~~~~~~~lviDIGGGStEl~ 158 (576)
|....=+. .| .-.+.+.+++++|++|.+.+.-.=+-+.-. |... ..++.+++-+|.| +-..
T Consensus 63 ~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~~~----~~~~~~~l~~GtG-iG~g 137 (321)
T 3vgl_A 63 GAAGYVDDKRATVLFAPNIDWRHEPLKDKVEQRVGLPVVVENDANAAAWGEYRFGAGQ----GHDDVICITLGTG-LGGG 137 (321)
T ss_dssp EESSEECTTSSCEEECSSSCCEEECHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTT----TCSSEEEEEESSS-EEEE
T ss_pred eccccEeCCCCEEEeCCCCCCcCCCHHHHHhhhhCCCEEEEehhhhHHHHHHHhCCCC----CCCCEEEEEeCcc-eEEE
Confidence 55554322 22 235678889999999999987766555422 2211 2355899999999 7777
Q ss_pred EeeCCeEee
Q 008139 159 IGKRGKVVF 167 (576)
Q Consensus 159 ~~~~~~~~~ 167 (576)
++-+|++..
T Consensus 138 ii~~G~l~~ 146 (321)
T 3vgl_A 138 IIIGNKLRR 146 (321)
T ss_dssp EEETTEECC
T ss_pred EEECCEEec
Confidence 778888765
No 67
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=81.71 E-value=5.6 Score=43.91 Aligned_cols=111 Identities=14% Similarity=0.230 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHH-H--HCCCCcc---cEEEEeehh-hhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhcc
Q 008139 65 QARSVESLLMFRDII-Q--SHNISRD---HTRAVATAA-VRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQF 137 (576)
Q Consensus 65 i~r~~~~L~~f~~~~-~--~~~v~~~---~i~~vATsA-vR~A~N~~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~ 137 (576)
+++..+.++.+-+-+ . ..++.+. +..++-|.+ +--..|++...+-+.+..|++-=.+ .+++-++.+|.-
T Consensus 192 ~q~~WD~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl--~~qavlAlyasG-- 267 (655)
T 4am6_A 192 LAELISDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAI--IQESLATCYGAG-- 267 (655)
T ss_dssp HHHHHHHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEE--EEHHHHHHHHSC--
T ss_pred ccccHHHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeee--ccHHHHHHHhCC--
Confidence 444445555443322 2 3567653 344455543 3334577788888888888874433 246766666532
Q ss_pred CCCCCCceEEEEeCCCceeEEEeeCCeEee--EEeechhHHHHHHhh
Q 008139 138 LPVFDRLVLSVDIGGGSTEFVIGKRGKVVF--CESVNLGHVSLSEKF 182 (576)
Q Consensus 138 l~~~~~~~lviDIGGGStEl~~~~~~~~~~--~~SlplG~vrl~e~f 182 (576)
+ ...++|||+|+|.|.++.+-+|.+.. ...+++|.-.+++.+
T Consensus 268 l---~ttGLVVDiG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL 311 (655)
T 4am6_A 268 I---STSTCVVNIGAAETRIACVDEGTVLEHSAITLDYGGDDITRLF 311 (655)
T ss_dssp C---SSCEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHH
T ss_pred C---CCceEEEcCCCceEEEEEEeCCEEEhhheeeecchHHHHHHHH
Confidence 1 13489999999999999999887763 357999998888754
No 68
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=80.76 E-value=20 Score=37.00 Aligned_cols=135 Identities=13% Similarity=0.071 Sum_probs=82.0
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEE--
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR-- 90 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~-- 90 (576)
..+..||||.+++++.+++. +|. ++.+.+.++ . . . + .++.++...++++.|.+. .+++..++.
T Consensus 85 ~~~lgiDiG~t~i~~~l~d~--~G~--il~~~~~~~--~-~--~-~--~~~~~~~l~~~i~~~~~~---~~~~~~~i~gi 149 (406)
T 1z6r_A 85 WHYLSLRISRGEIFLALRDL--SSK--LVVEESQEL--A-L--K-D--DLPLLDRIISHIDQFFIR---HQKKLERLTSI 149 (406)
T ss_dssp CEEEEEEEETTEEEEEEEET--TCC--EEEEEEEEC--C-S--S-C--SSCHHHHHHHHHHHHHHH---TGGGCCCEEEE
T ss_pred cEEEEEEEcCCEEEEEEEcC--CCC--EEEEEEecC--C-C--C-C--HHHHHHHHHHHHHHHHHh---cCCCcCceeEE
Confidence 46789999999999999975 354 344443332 1 1 1 1 245577777777776543 333222343
Q ss_pred EEeehhhhh--------cCC-----hHHHHHHHHHHcCCcEEEeChHHHHHHHH--hhhhccCCCCCCceEEEEeCCCce
Q 008139 91 AVATAAVRA--------AEN-----KDEFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVLSVDIGGGST 155 (576)
Q Consensus 91 ~vATsAvR~--------A~N-----~~~fl~~i~~~tG~~i~vIsg~eEA~l~~--~gv~~~l~~~~~~~lviDIGGGSt 155 (576)
+||....=+ +.| .-.+.+.+++++|++|.|.+.-.=|-+.- .|... ..++.+++-+|.| +
T Consensus 150 gi~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~pv~v~NDa~aaalaE~~~g~~~----~~~~~v~l~~GtG-i 224 (406)
T 1z6r_A 150 AITLPGIIDTENGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMAEALFGASR----GARDVIQVVIDHN-V 224 (406)
T ss_dssp EEEESSEEETTTTEEEECTTCTTCSSBCHHHHHHHHHSSCEEEEEHHHHHHHHHHHHSTTT----TCSSEEEEEESSS-E
T ss_pred EEEeecCEeCCCCEEecCCCCCCccCCCHHHHHHHHHCCCEEEechhHHHHHHHHHhcCCC----CCCcEEEEEECCc-E
Confidence 345544311 222 23567888899999999987655444432 22211 2345899999998 5
Q ss_pred eEEEeeCCeEee
Q 008139 156 EFVIGKRGKVVF 167 (576)
Q Consensus 156 El~~~~~~~~~~ 167 (576)
-..++-+|++..
T Consensus 225 G~giv~~G~l~~ 236 (406)
T 1z6r_A 225 GAGVITDGHLLH 236 (406)
T ss_dssp EEEEEETTEETT
T ss_pred EEEEEECCEEee
Confidence 666777887754
No 69
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=80.67 E-value=11 Score=37.54 Aligned_cols=135 Identities=13% Similarity=0.115 Sum_probs=84.8
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEEEE
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (576)
..+..||||.+++++.+++. +|. ++.+.+.++.-..+ .++.++...+.++++.+ ....+ .-.++
T Consensus 19 ~~~lgidiggt~i~~~l~d~--~g~--il~~~~~~~~~~~~-------~~~~~~~i~~~i~~~~~--~~~~i---~gigi 82 (321)
T 3r8e_A 19 GMILGIDVGGTSVKFGLVTP--EGE--IQNATRFMTADWVN-------GIGFVESMKLEIGNFLK--QYPIV---KGVGI 82 (321)
T ss_dssp CCEEEEECCSSEEEEEEECT--TCC--EEEEEEEEHHHHHT-------TTCHHHHHHHHHHHHHH--HCTTC---CEEEE
T ss_pred cEEEEEEECCCEEEEEEEcC--CCc--EEEEEEEeCCCCCC-------HHHHHHHHHHHHHHHHh--ccCCe---eEEEE
Confidence 45789999999999999965 354 44444444321111 23456666777776654 32333 23456
Q ss_pred eehhhhh--------cCC-----hHHHHHHHHHHc-CCcEEEeChHHHHHHHH--hhhhccCCCCCCceEEEEeCCCcee
Q 008139 93 ATAAVRA--------AEN-----KDEFVECVREKV-GFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVLSVDIGGGSTE 156 (576)
Q Consensus 93 ATsAvR~--------A~N-----~~~fl~~i~~~t-G~~i~vIsg~eEA~l~~--~gv~~~l~~~~~~~lviDIGGGStE 156 (576)
|....=+ +.| .-.+.+.+++++ |++|.|.+.-.=+-+.- .|... ..++.+++-+|.| +-
T Consensus 83 ~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~~pV~v~NDa~aaalaE~~~g~~~----~~~~~v~l~~GtG-iG 157 (321)
T 3r8e_A 83 GWPGLVSLDRTKVILLPNIPSVVNVPIVEILRSEFPHIHFKIENDAKCAALGEYYFGENK----RMQTFILLALGTG-VG 157 (321)
T ss_dssp EESSEECTTSCCEEEBTTBCCCCSCCHHHHHHHHCTTSEEEEEEHHHHHHHHHHHHSTTT----TCSSEEEEEESSS-EE
T ss_pred EecccEECCCCEEEeCCCCccccCCCHHHHHHHHcCCCCEEEEchHHHHHHHHHHhCCCC----CCCcEEEEEECCc-eE
Confidence 6655433 222 235677889999 99999988766555542 23222 2345899999999 77
Q ss_pred EEEeeCCeEeeE
Q 008139 157 FVIGKRGKVVFC 168 (576)
Q Consensus 157 l~~~~~~~~~~~ 168 (576)
..++.+|++...
T Consensus 158 ~gii~~G~l~~G 169 (321)
T 3r8e_A 158 SGVMMNGKLFIG 169 (321)
T ss_dssp EEEEETTEECCC
T ss_pred EEEEECCEEecC
Confidence 777778887653
No 70
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=80.43 E-value=12 Score=37.42 Aligned_cols=134 Identities=10% Similarity=0.074 Sum_probs=77.7
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEEEEe
Q 008139 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (576)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (576)
.+..||||.+.+++.+++. +|. ++.+.+.++. ..+ .++.++.+.+.++++.. .++.. .-.++|
T Consensus 25 ~~lgiDiGgt~i~~~l~d~--~G~--il~~~~~~~~------~~~--~~~~~~~i~~~i~~~~~---~~~~~--~gigi~ 87 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNE--KLE--RVATERVPTP------TDD--YPLLLETIAGLVAKYDQ---EFACE--GKIGLG 87 (327)
T ss_dssp CEEEEEECSSEEEEEEECT--TCC--EEEEEEEECC------TTC--HHHHHHHHHHHHHHHHH---HHTSC--CEEEEE
T ss_pred EEEEEEECCCEEEEEEEeC--CCc--EEEEEEecCC------CCC--HHHHHHHHHHHHHHHHH---hcCCc--cEEEEE
Confidence 5789999999999999865 454 3444443321 100 13344444444544433 22321 234556
Q ss_pred ehhhhhcC------------ChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEee
Q 008139 94 TAAVRAAE------------NKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGK 161 (576)
Q Consensus 94 TsAvR~A~------------N~~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~ 161 (576)
....=+.. +.-.+.+.+++++|++|.|.+.-.=+-+.-.-.-.. ...++.+++-+|.| +-..++-
T Consensus 88 ~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~~pV~v~NDa~aaalgE~~~g~~--~~~~~~~~l~~GtG-iG~gii~ 164 (327)
T 4db3_A 88 LPGMEDADDATVLTVNVPAAKGKPLRADLEAKIGRSVKIENDANCFALSEAWDEEL--QDAPSVMGLILGTG-FGGGLIY 164 (327)
T ss_dssp ESEEECTTTCCEEESSSGGGTTSCHHHHHHHHHSSCCEEEEHHHHHHHHHHTSTTT--TTCSEEEEEEESSS-EEEEEEE
T ss_pred eeccEeCCCCEEEcCCCccccCCCHHHHHHHHHCCCEEEecchhHHHHHHHHhCCC--CCCCcEEEEEeCcc-ceEEEEE
Confidence 55543322 223567888999999999988766555542211011 12345788999988 6666677
Q ss_pred CCeEee
Q 008139 162 RGKVVF 167 (576)
Q Consensus 162 ~~~~~~ 167 (576)
+|++..
T Consensus 165 ~G~l~~ 170 (327)
T 4db3_A 165 EGKVFS 170 (327)
T ss_dssp TTEECC
T ss_pred CCEEee
Confidence 888764
No 71
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=79.32 E-value=7 Score=40.31 Aligned_cols=143 Identities=15% Similarity=0.117 Sum_probs=76.8
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeecc--CCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEEE
Q 008139 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGR--DLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRA 91 (576)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~--~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~ 91 (576)
.+.+||+|++++++.+++. + +++.+.+.++.-.. + .+ .+ -+.++.+++.+.++. ++++++..++.+
T Consensus 3 ~vlgidiGgt~ik~al~d~---~--~il~~~~~~~~~~~~~~-~~--~~-~~~~~~~~~~i~~~l---~~~~~~~~~i~g 70 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFED---E--RMVKMQNFSHSPDELGR-FQ--KI-LDQLEFREKIARQFV---EETGYSLSSFSA 70 (381)
T ss_dssp EEEEEEECSSEEEEEEEET---T--EEEEEEEEECCHHHHHT-CS--SG-GGGHHHHHHHHHHHH---HTTTCCGGGCSE
T ss_pred eEEEEECCccceeEEEEec---c--hheeeeecccCcccccc-hh--hH-HHHHHHHHHHHHHHH---HHcCCCccCceE
Confidence 4789999999999999972 2 55655544432110 1 10 11 123333355555543 344443222222
Q ss_pred -Eee--------hhh-----------------hhcCCh-HHHHHHHHHHcCCcEEEeChHH------HHHHHHh------
Q 008139 92 -VAT--------AAV-----------------RAAENK-DEFVECVREKVGFEVDVLTGEQ------EAKFVYM------ 132 (576)
Q Consensus 92 -vAT--------sAv-----------------R~A~N~-~~fl~~i~~~tG~~i~vIsg~e------EA~l~~~------ 132 (576)
+|. ..+ ..+.|- -.+.+.+++++|+++-|.+... +|+...+
T Consensus 71 Ii~~pG~vd~~~G~~~~i~~~~~~~l~~~~~~~~~~nl~~~l~~~l~~~~~~Pv~v~NDan~~~~~~~a~aaalp~~~r~ 150 (381)
T 1saz_A 71 FVSRGGLLDPIPGGVYLVDGLMIKTLKSGKNGEHASNLGAIIAHRFSSETGVPAYVVDPVVVDEMEDVARVSGHPNYQRK 150 (381)
T ss_dssp EEEECCSCSCBCSSEEECCHHHHHHHHHTTTCCCTTHHHHHHHHHHHHHHCCCEEEESCTTBCCCCGGGTBCSSTTCBCC
T ss_pred EEecCCCCCCCCCceEecCHHHHHHHHhcccccChhhhhHHHHHHHHHhcCCCEEEeCCCccccCcHHHHHcCCcchhhh
Confidence 342 122 233442 3455667889999998877664 3333222
Q ss_pred -----------hh-h-c--cCCCCCCceEEEEeCCCceeEEEeeCCeEeeEE
Q 008139 133 -----------GV-L-Q--FLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCE 169 (576)
Q Consensus 133 -----------gv-~-~--~l~~~~~~~lviDIGGGStEl~~~~~~~~~~~~ 169 (576)
|= . . ..+..+.+.+++-+|.|. -...+.+|++....
T Consensus 151 ~gfhgls~~~~aE~~~~g~~~~~~~~~~v~~~lGtGi-G~g~i~~G~~~~G~ 201 (381)
T 1saz_A 151 SIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGGI-SIAAHRKGRVIDVN 201 (381)
T ss_dssp CCSCHHHHHHHHHHHHHHTTCCGGGCEEEEEEESSSE-EEEEEETTEEEEEC
T ss_pred cccccccHHHHHHHHHHhcCCCCccCCEEEEEeCCCc-EEEEEECCEEEEec
Confidence 21 1 0 111122268999999987 45556677776553
No 72
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=79.04 E-value=22 Score=34.74 Aligned_cols=128 Identities=12% Similarity=0.070 Sum_probs=76.8
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCC-HHHHHHHHHHHHHHHHHHHHCCCCcccEEEEe
Q 008139 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSIS-TQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (576)
Q Consensus 15 ~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls-~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (576)
+..||+|..+++..+++ + | +++.+.+.+. .... ..+ ++.+++..+.++..... ....+ .-..++
T Consensus 2 ~lgiDiGGT~~~~~l~d-~--g--~il~~~~~~~---~~~~---~~~~~~~~~~i~~~i~~~~~~-~~~~i---~~igig 66 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-E--G--KSLGRFQTSG---INPF---QQDRNEIDTALRSEVLPAIGQ-KASSI---RAVYFY 66 (291)
T ss_dssp EEEEEECSSEEEEEEEE-T--T--EEEEEEEEEC---CCTT---TSCHHHHHHHHTTTTHHHHTT-STTTC---CEEEEE
T ss_pred EEEEEeCccceEEEEEe-C--C--eEEEEEECCC---CCcc---cCCHHHHHHHHHHHHHHHhCC-Ccccc---cEEEEE
Confidence 56899999999999997 4 4 3444433211 0110 112 34455555555543210 00112 235677
Q ss_pred ehhhhhcCChHHHHHHHHHHcCC--cEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEeeCCeEe
Q 008139 94 TAAVRAAENKDEFVECVREKVGF--EVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVV 166 (576)
Q Consensus 94 TsAvR~A~N~~~fl~~i~~~tG~--~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~ 166 (576)
+...- ..++..+.+.+++.++. ++.|-+.-.=|.+.-. . .++++++=+|.||--..+..+|++.
T Consensus 67 ~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~------g--~~~~v~v~~GTGigg~~i~~~G~~~ 132 (291)
T 1zbs_A 67 GAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC------G--DSEGIACILGTGSNSCLFDGREIKA 132 (291)
T ss_dssp ETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT------T--TSCEEEEEESSSEEEEEECSSSEEE
T ss_pred CCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc------C--CCCcEEEEecCChheEEECCCCcEE
Confidence 77753 45566788889999995 9999887776665431 2 2446777799999656565677764
No 73
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=79.04 E-value=5.1 Score=43.24 Aligned_cols=79 Identities=15% Similarity=0.273 Sum_probs=47.3
Q ss_pred CceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCC--CHHHH-HHHHHHHHHHHHHHHHCCCCccc
Q 008139 12 QTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSI--STQSQ-ARSVESLLMFRDIIQSHNISRDH 88 (576)
Q Consensus 12 ~~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~L--s~e~i-~r~~~~L~~f~~~~~~~~v~~~~ 88 (576)
++.+..||+||.|+|.++++ .+|+. +......... .....|.. +++.+ +.++++++ +.++..++++.+
T Consensus 3 kkYvlgID~GTss~Ka~l~d--~~G~~--va~~~~~~~~--~~p~~G~~Eqdp~~~w~~~~~~i~---~~l~~~~~~~~~ 73 (526)
T 3ezw_A 3 KKYIVALDQGTTSSRAVVMD--HDANI--ISVSQREFEQ--IYPKPGWVEHDPMEIWATQSSTLV---EVLAKADISSDQ 73 (526)
T ss_dssp CCEEEEEEECSSEEEEEEEC--TTCCE--EEEEEEECCC--BCSSTTCCEECHHHHHHHHHHHHH---HHHHHHTCCGGG
T ss_pred ceEEEEEEccccceeeeEEc--CCCCE--EEEEEEecCc--ccCCCCcEEECHHHHHHHHHHHHH---HHHHHcCCChhh
Confidence 35789999999999999986 45654 3333333222 11222322 34333 44444554 555666888788
Q ss_pred EEEEeehhhhh
Q 008139 89 TRAVATAAVRA 99 (576)
Q Consensus 89 i~~vATsAvR~ 99 (576)
|.+++-++.|.
T Consensus 74 I~aIgis~q~~ 84 (526)
T 3ezw_A 74 IAAIGITNQRE 84 (526)
T ss_dssp EEEEEEEECSS
T ss_pred EEEEEEeCCCC
Confidence 99998665543
No 74
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=76.55 E-value=5.7 Score=43.03 Aligned_cols=78 Identities=12% Similarity=0.065 Sum_probs=43.8
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeee--ec-----cCCCc--CC--CCCH-HHHHHHHHHHHHHHHHHH
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVI--LG-----RDLSS--SC--SIST-QSQARSVESLLMFRDIIQ 80 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vr--Lg-----~~~~~--~g--~Ls~-e~i~r~~~~L~~f~~~~~ 80 (576)
+.+..||+||.|+|.++++. +|+. +........ .- .|... .| .-++ +....++.++.+ .+.
T Consensus 10 ~~~lgID~GTts~Ka~l~d~--~G~v--v~~~~~~~~~~~p~~~~~~g~~e~~~g~~eqdp~~~w~~~~~~~~~---~l~ 82 (538)
T 4bc3_A 10 RCCLGWDFSTQQVKVVAVDA--ELNV--FYEESVHFDRDLPEFGTQGGVHVHKDGLTVTSPVLMWVQALDIILE---KMK 82 (538)
T ss_dssp CEEEEEEECSSEEEEEEEET--TCCE--EEEEEEEHHHHSGGGCCBTTBEECTTSSCEEEEHHHHHHHHHHHHH---HHH
T ss_pred CEEEEEEEcCcCEEEEEECC--CCCE--EEEEEEecCCcCCcccCCCCeeecCCCccccCcHHHHHHHHHHHHH---HHH
Confidence 68999999999999999973 5654 333333221 11 11111 11 1123 344445444432 334
Q ss_pred HCCCCcccEEEEeehhh
Q 008139 81 SHNISRDHTRAVATAAV 97 (576)
Q Consensus 81 ~~~v~~~~i~~vATsAv 97 (576)
..+++..+|.+|+-++-
T Consensus 83 ~~~~~~~~I~aIgis~q 99 (538)
T 4bc3_A 83 ASGFDFSQVLALSGAGQ 99 (538)
T ss_dssp HTTCCGGGEEEEEEEEC
T ss_pred HcCCChHHeEEEEeccc
Confidence 56776678988886554
No 75
>2pgs_A Putative deoxyguanosinetriphosphate triphosphohyd; deoxyguanosinetriphosphate triphsphohydrolase, pseudomonas S PV. phaseolicola 1448A; 2.35A {Pseudomonas syringae PV}
Probab=76.41 E-value=2.8 Score=44.45 Aligned_cols=46 Identities=17% Similarity=0.315 Sum_probs=31.9
Q ss_pred hhHHHHHHHHHHHHHHHHhc-cc-ccchhhhhhcccCcch-HHHHHHHHHHhhccc
Q 008139 361 KAGAQCASIAKDIFEGLRKC-DK-LYNNQVKLIASFEDKD-LEYLEAACLLHNIGH 413 (576)
Q Consensus 361 ~ha~~V~~~A~~LFd~l~~~-~~-l~~~~~~~~~~~~~~~-r~LL~~AalLHdIG~ 413 (576)
.|+--|+.+|..+...|... .. ++. ..++.+ +.++++||++||||.
T Consensus 65 ~Hsl~v~~ia~~~~~~l~~~~~~~~~~-------~~~~~~~~~~v~~a~L~HDiGH 113 (451)
T 2pgs_A 65 THSLEVSCVGRSLGMRVGETLRAALPD-------WCDPSDLGMVVQSACLAHDIGN 113 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGSCT-------TCCHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccccc-------ccchhHHHHHHHHHHHhhccCC
Confidence 79999999999988888642 11 110 112222 359999999999995
No 76
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=76.27 E-value=23 Score=35.45 Aligned_cols=134 Identities=10% Similarity=0.024 Sum_probs=80.7
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccE--E
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHT--R 90 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i--~ 90 (576)
..+..||||.+++++.+++. +|. ++.+.+.+.. . . .++.++...+.++++.+.... +..++ .
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~--~G~--il~~~~~~~~------~-~--~~~~~~~i~~~i~~~~~~~~~---~~~~i~gi 93 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSM--KGE--IVKKYTQFNP------K-T--YEERINLILQMCVEAAAEAVK---LNCRILGV 93 (343)
T ss_dssp EEEEEEEECSSEEEEEEEET--TSC--EEEEEEEECC------S-S--HHHHHHHHHHHHHHHHHHHHH---TTEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECC--CCc--EEEEEEEcCC------C-C--HHHHHHHHHHHHHHHHHhccc---ccCceEEE
Confidence 45688999999999999975 454 3443333321 1 1 245567777777776544321 11233 3
Q ss_pred EEeehhh--------hhcCCh------HHHHHHHHHHcCCcEEEeChHHHHHHHHh--hhhccCCCCCCceEEEEeCCCc
Q 008139 91 AVATAAV--------RAAENK------DEFVECVREKVGFEVDVLTGEQEAKFVYM--GVLQFLPVFDRLVLSVDIGGGS 154 (576)
Q Consensus 91 ~vATsAv--------R~A~N~------~~fl~~i~~~tG~~i~vIsg~eEA~l~~~--gv~~~l~~~~~~~lviDIGGGS 154 (576)
++|.... ..+.|- -.+.+.+++++|++|.|.+.-.=|-+.-. |... ..++.+++-+|.|
T Consensus 94 gi~~pG~vd~~~g~v~~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~~~----~~~~~v~i~~GtG- 168 (343)
T 2yhw_A 94 GISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGK----GLENFVTLITGTG- 168 (343)
T ss_dssp EEEESSEEETTTTEEEECCTTSSSCSSEECHHHHHHHHCSCEEEEEHHHHHHHHHHHTSTTT----TCSCEEEEEESSS-
T ss_pred EEecccCEeCCCCEEEeCCcCCCCCcCCCHHHHHHHHHCCCEEEechhHHHHHHHHHhCCCC----CCCcEEEEEECCC-
Confidence 4444443 122332 24567888899999999887665555422 2211 2245899999998
Q ss_pred eeEEEeeCCeEee
Q 008139 155 TEFVIGKRGKVVF 167 (576)
Q Consensus 155 tEl~~~~~~~~~~ 167 (576)
+-..++-+|++..
T Consensus 169 iG~gii~~G~l~~ 181 (343)
T 2yhw_A 169 IGGGIIHQHELIH 181 (343)
T ss_dssp EEEEEEETTEECC
T ss_pred EEEEEEECCEEec
Confidence 5666777887764
No 77
>3ljx_A MMOQ response regulator; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Methylococcus capsulatus} PDB: 3ljv_A 3p3q_A
Probab=76.22 E-value=6.6 Score=38.83 Aligned_cols=38 Identities=13% Similarity=0.074 Sum_probs=26.9
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhccccc
Q 008139 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT 415 (576)
Q Consensus 361 ~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~~I 415 (576)
.|+..|+.+|..| .+..+.. +..-+..|++|||||+.+
T Consensus 111 ~hs~~~A~~a~~l----a~~~~~~-------------~~~~~~~agLLhdiGkl~ 148 (288)
T 3ljx_A 111 QKSLARAVALQSI----TAQASTV-------------APKEAFTLGLLADVGRLA 148 (288)
T ss_dssp HHHHHHHHHHHHH----HHTSSSS-------------CHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHH----HHHCCCC-------------CHHHHHHHHHHHhccHHH
Confidence 5888888888864 4443321 235688999999999865
No 78
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=74.65 E-value=8 Score=41.52 Aligned_cols=77 Identities=13% Similarity=0.124 Sum_probs=44.7
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCC--CH-HHHHHHHHHHHHHHHHHHHCCCCcccE
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSI--ST-QSQARSVESLLMFRDIIQSHNISRDHT 89 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~L--s~-e~i~r~~~~L~~f~~~~~~~~v~~~~i 89 (576)
+.+..||+|+.|+|..+++ .+|+ ++...+.+... .....|.. .+ +-.+.+++++++. +++.+++..+|
T Consensus 7 ~~~lgIDiGtts~k~~l~d--~~G~--il~~~~~~~~~--~~p~~g~~e~dp~~~~~~i~~~i~~~---~~~~~~~~~~I 77 (508)
T 3ifr_A 7 RQVIGLDIGTTSTIAILVR--LPDT--VVAVASRPTTL--SSPHPGWAEEDPAQWWDNARAVLAEL---KTTAGESDWRP 77 (508)
T ss_dssp CEEEEEEECSSEEEEEEEE--TTTE--EEEEEEEECCC--BCSSTTCCEECHHHHHHHHHHHHHHH---HHHHCGGGCCE
T ss_pred CEEEEEEecCcceEEEEEC--CCCC--EEEEEEEecce--ecCCCCceEECHHHHHHHHHHHHHHH---HHhcCCChhhe
Confidence 5788999999999999997 3564 45444444322 11122221 23 3345555556554 34446555578
Q ss_pred EEEeehhhh
Q 008139 90 RAVATAAVR 98 (576)
Q Consensus 90 ~~vATsAvR 98 (576)
.+|+-++-+
T Consensus 78 ~~Igis~~~ 86 (508)
T 3ifr_A 78 GGICVTGML 86 (508)
T ss_dssp EEEEEEECS
T ss_pred EEEEEECCC
Confidence 877765544
No 79
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=74.37 E-value=18 Score=35.46 Aligned_cols=115 Identities=14% Similarity=0.111 Sum_probs=67.8
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEEEEe
Q 008139 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (576)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (576)
.+-.||+|..++++.+++. +|. ++.+.+.+.. .....+ .++.++...+.++++.+ .. + ...++|
T Consensus 3 ~~lgiDiGgt~~~~~l~d~--~g~--i~~~~~~~~~---~~~~~~--~~~~~~~i~~~i~~~~~---~~-~---~~igi~ 66 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDC--EGN--FIGEGSSGPG---NYHNVG--LTRAIENIKEAVKIAAK---GE-A---DVVGMG 66 (299)
T ss_dssp CEEEEEECSSCEEEEEECT--TSC--EEEEEEESCC---CHHHHC--HHHHHHHHHHHHHHHHT---SC-C---SEEEEE
T ss_pred EEEEEEeCCCcEEEEEEcC--CCC--EEEEEeCCCC---CcccCC--HHHHHHHHHHHHHHHHh---cC-C---CEEEEE
Confidence 4688999999999999864 454 3433322210 000000 23445555555555432 22 3 357788
Q ss_pred ehhhhhcCCh-HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCc
Q 008139 94 TAAVRAAENK-DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGS 154 (576)
Q Consensus 94 TsAvR~A~N~-~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGS 154 (576)
.... +..++ ..+.+.+++ +|+++.+.+.-.=+-+.- .. .++.+++-+|.|+
T Consensus 67 ~~G~-~~~~~~~~l~~~l~~-~~~pv~v~ND~~aaa~~e---~~-----~~~~v~l~~GTG~ 118 (299)
T 2e2o_A 67 VAGL-DSKFDWENFTPLASL-IAPKVIIQHDGVIALFAE---TL-----GEPGVVVIAGTGS 118 (299)
T ss_dssp ETTC-CSHHHHHHHHHHHTT-SSSEEEEEEHHHHHHHHH---HT-----TSCEEEEEESSSE
T ss_pred cCCC-CchhHHHHHHHHHHh-CCCCEEEeCcHHHHHhhc---cC-----CCCeEEEEecCCE
Confidence 8887 54333 245566667 899998877655544432 22 2458999999996
No 80
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=73.90 E-value=37 Score=33.49 Aligned_cols=127 Identities=16% Similarity=0.223 Sum_probs=75.4
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEEEE
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (576)
+.+..||||..++++.+++. +|. ++.+.+.++. + .++.++... +.++++.+. -..+
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~--~G~--il~~~~~~t~-------~---~~~~l~~i~-------~~~~~~~i~---gigi 58 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGRE--DGT--IIDRIEFPTX-------M---PDETIEXVI-------QYFSQFSLQ---AIGI 58 (302)
T ss_dssp CCEEEEEECSSEEEEEEECT--TSC--EEEEEEEECC-------C---HHHHHHHHH-------HHHTTSCCS---EEEE
T ss_pred cEEEEEEECcceeEEEEEEC--CCc--EEEEEEecCC-------C---hHHHHHHHH-------HHhccCCce---EEEE
Confidence 45789999999999999864 454 3444444431 0 123333322 333334442 3455
Q ss_pred eehhh-------------hhcCC----hHHHHHHHHHHcCCcEEEeChHHHHHHHH--hhhhccCCCCCCceEEEEeCCC
Q 008139 93 ATAAV-------------RAAEN----KDEFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVLSVDIGGG 153 (576)
Q Consensus 93 ATsAv-------------R~A~N----~~~fl~~i~~~tG~~i~vIsg~eEA~l~~--~gv~~~l~~~~~~~lviDIGGG 153 (576)
|+... ..+.| .-.+.+.+++++|++|.+.+.-.=|-+.- .|... ..++.+++-+|.|
T Consensus 59 ~~pG~vd~~~~~~~~G~i~~~~~~~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~~G~~~----~~~~~~~l~~GtG 134 (302)
T 3epq_A 59 GSFGPVDNDXTSQTYGTITATPXAGWRHYPFLQTVXNEMXIPVGFSTDVNAAALGEFLFGEAX----GLDSCLYITIGTG 134 (302)
T ss_dssp EECSSEECCTTSTTTTEECCCSSTTTBTCCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTT----TCSCEEEEEESSS
T ss_pred EeceeeccccccccccEEecCCCCCccCCChHHHHHHHhCCCEEEechhHHHHHHHHHhCCCC----CCCcEEEEEECCc
Confidence 55332 22333 23567889999999999988766555442 23221 2245888888876
Q ss_pred ceeEEEeeCCeEeeE
Q 008139 154 STEFVIGKRGKVVFC 168 (576)
Q Consensus 154 StEl~~~~~~~~~~~ 168 (576)
+--.++-+|++...
T Consensus 135 -iG~gii~~G~l~~G 148 (302)
T 3epq_A 135 -IGAGAIVEGRLLQG 148 (302)
T ss_dssp -EEEEEEETTEECCS
T ss_pred -eEEEEEECCEEccc
Confidence 55666678887654
No 81
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=73.87 E-value=9 Score=41.16 Aligned_cols=75 Identities=9% Similarity=0.046 Sum_probs=43.5
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCHHH-HHHHHHHHHHHHHHHHHCCCCcccE
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQS-QARSVESLLMFRDIIQSHNISRDHT 89 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~--Ls~e~-i~r~~~~L~~f~~~~~~~~v~~~~i 89 (576)
+.+..||+|+.|+|..+++. +|+. +...+.+..+- ....|. -.++. .+.+++++++. + +.+++..+|
T Consensus 5 ~~~lgIDiGtts~k~~l~d~--~G~i--l~~~~~~~~~~--~p~~g~~e~dp~~~~~~~~~~i~~~---~-~~~~~~~~I 74 (511)
T 3hz6_A 5 FYIATFDIGTTEVKAALADR--DGGL--HFQRSIALETY--GDGNGPVEQDAGDWYDAVQRIASSW---W-QSGVDARRV 74 (511)
T ss_dssp CEEEEEEECSSEEEEEEECT--TSCE--EEEEEEECCCB--STTSSCCEECHHHHHHHHHHHHHHH---H-TTTCCGGGE
T ss_pred cEEEEEEeCCCceEEEEECC--CCCE--EEEEEeeccee--cCCCCCEEECHHHHHHHHHHHHHHH---H-hcCCChhHe
Confidence 47899999999999999974 4543 43333332221 122232 23333 33445555443 3 556666678
Q ss_pred EEEeehhh
Q 008139 90 RAVATAAV 97 (576)
Q Consensus 90 ~~vATsAv 97 (576)
.+|+-++-
T Consensus 75 ~~Igis~q 82 (511)
T 3hz6_A 75 SAIVLSGQ 82 (511)
T ss_dssp EEEEEEEC
T ss_pred EEEEEecc
Confidence 88886653
No 82
>3m1t_A Putative phosphohydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE GOL; 1.62A {Shewanella amazonensis} SCOP: a.211.1.0
Probab=73.15 E-value=6.4 Score=38.62 Aligned_cols=38 Identities=21% Similarity=0.194 Sum_probs=26.9
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccC
Q 008139 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTS 416 (576)
Q Consensus 361 ~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~~I~ 416 (576)
.|+..|+.+|..|-..+ ++ + ...+..|++|||||+.+-
T Consensus 108 ~hs~~~a~~a~~la~~~----~~-----------~---~~~~~~agLLhdiGkl~l 145 (275)
T 3m1t_A 108 GNTFEVAIICQELAKRL----GT-----------L---PEEAFTCGILHSIGELLI 145 (275)
T ss_dssp HHHHHHHHHHHHHHHHH----TS-----------C---HHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh----CC-----------C---HHHHHHHHHHHHccHHHH
Confidence 58888888888654333 32 1 245889999999998763
No 83
>3mem_A Putative signal transduction protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.25A {Marinobacter aquaeolei}
Probab=72.28 E-value=13 Score=39.23 Aligned_cols=64 Identities=16% Similarity=0.177 Sum_probs=36.3
Q ss_pred HHHHHHHcCCcEEEeChHHHHHHH-H--hhhhccCCCCCCceEEEEeCCCceeEEEeeCCeEeeEEe
Q 008139 107 VECVREKVGFEVDVLTGEQEAKFV-Y--MGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCES 170 (576)
Q Consensus 107 l~~i~~~tG~~i~vIsg~eEA~l~-~--~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~~~S 170 (576)
++.+++.+|-+++..+.+|=.++. + .|....+....+-.+++|-.==..+-+++..|+......
T Consensus 57 lk~l~~~~g~k~~~~~~~~~~~~~~g~~~Ggv~P~g~~~~~~~~iD~~l~~~~~i~~~~G~~~~~i~ 123 (457)
T 3mem_A 57 LEALNKRLGRDLRMMQRREQVRVRQKAGLQELPALPSLTGWPTVVDRRVDELEAVALELGEQDLGLM 123 (457)
T ss_dssp HHHHHHHHTCCCEECCHHHHHHHHHHHTCSSCCSCGGGTCCCEEEEHHHHHCSEEEEECSSSSEEEE
T ss_pred HHHHHHHhCCCCeeCCHHHHHHHcCCCCCCCCCCCCCCcCCCEEEehhhccCCEEEEECCCCCceEE
Confidence 456677777777778777666653 2 355544433333356777544445555666555444333
No 84
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=72.08 E-value=36 Score=33.66 Aligned_cols=134 Identities=10% Similarity=0.096 Sum_probs=80.4
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEEEE
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (576)
..+..||||.+.+++.+++. +|. ++.+.+.++. . .+ .++.++.+.+.++++... .+. ..-.++
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~--~g~--il~~~~~~~~--~----~~--~~~~~~~i~~~i~~~~~~---~~~--i~~igi 86 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDS--TRR--LQWEKRVPTP--H----TS--YSAFLDAVCELVEEADQR---FGV--KGSVGI 86 (327)
T ss_dssp CEEEEEEECSSEEEEEEEET--TCC--EEEEEEEECC--C----SC--HHHHHHHHHHHHHHHHHH---HTS--CCEEEE
T ss_pred ceEEEEEECCCEEEEEEEeC--CCC--EEEEEEecCC--C----CC--HHHHHHHHHHHHHHHHHh---cCC--ccEEEE
Confidence 35788999999999999975 354 3444333321 1 11 244555555556555432 221 123567
Q ss_pred eehhhhhcC-------C-----hHHHHHHHHHHcCCcEEEeChHHHHHHHHh--hhhccCCCCCCceEEEEeCCCceeEE
Q 008139 93 ATAAVRAAE-------N-----KDEFVECVREKVGFEVDVLTGEQEAKFVYM--GVLQFLPVFDRLVLSVDIGGGSTEFV 158 (576)
Q Consensus 93 ATsAvR~A~-------N-----~~~fl~~i~~~tG~~i~vIsg~eEA~l~~~--gv~~~l~~~~~~~lviDIGGGStEl~ 158 (576)
|....=+.. | .-.+.+.+++++|++|.|.+.-.=|-+.-. |... ..++.+++-+|.| +-..
T Consensus 87 ~~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~~pv~v~NDa~aaalgE~~~g~~~----~~~~~v~l~~GtG-iG~g 161 (327)
T 2ap1_A 87 GIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRLDNDANCFALSEAWDDEFT----QYPLVMGLILGTG-VGGG 161 (327)
T ss_dssp EESSBSCCTTSCCBCTTCTTTTTSCHHHHHHHHHTSCEEEEEHHHHHHHHHHTSTTGG----GCSEEEEEEESSS-EEEE
T ss_pred EeeeeEECCCCEEEccCCCccCCCChHHHHHHHHCCCEEEecHHHHHHHHHHHhCcCC----CCCcEEEEEECCc-EEEE
Confidence 766653322 1 124567888889999999887776655432 2211 2345788999998 5566
Q ss_pred EeeCCeEeeE
Q 008139 159 IGKRGKVVFC 168 (576)
Q Consensus 159 ~~~~~~~~~~ 168 (576)
++-+|++...
T Consensus 162 iv~~G~l~~G 171 (327)
T 2ap1_A 162 LVLNGKPITG 171 (327)
T ss_dssp EEETTEEECC
T ss_pred EEECCEEeec
Confidence 7778877643
No 85
>3bg2_A DGTP triphosphohydrolase; structural genomics, NYSGXRC, target 10395N, triphosphohydro PSI-2, protein structure initiative; 1.95A {Leeuwenhoekiella blandensis}
Probab=71.75 E-value=2.6 Score=44.63 Aligned_cols=51 Identities=18% Similarity=0.199 Sum_probs=30.1
Q ss_pred hhHHHHHHHHHHHHHHHHhc-c-cccchhhhhhcccCcch-HHHHHHHHHHhhccc
Q 008139 361 KAGAQCASIAKDIFEGLRKC-D-KLYNNQVKLIASFEDKD-LEYLEAACLLHNIGH 413 (576)
Q Consensus 361 ~ha~~V~~~A~~LFd~l~~~-~-~l~~~~~~~~~~~~~~~-r~LL~~AalLHdIG~ 413 (576)
.|+--|+.+|..+...|... . ..+. .... ....+++ ..++++||++||||.
T Consensus 67 tHSL~V~~iar~~~~~l~~~l~~~~~~-~~~~-~~~~~~~~~~lv~~a~L~HDiGH 120 (444)
T 3bg2_A 67 THSLEVSVVGRSLGRMVGKKLLEKYPH-LEQV-YGYKFNDFGAIVAAAALAHDIGN 120 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTH-HHHT-TCCCHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccc-cccc-cccchhhHHHHHHHHHHhcccCC
Confidence 68888888888877776431 0 0000 0000 0012222 479999999999995
No 86
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=71.66 E-value=12 Score=39.97 Aligned_cols=75 Identities=13% Similarity=0.242 Sum_probs=43.8
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCH-HHHHHHHHHHHHHHHHHHHCCCCcccE
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--IST-QSQARSVESLLMFRDIIQSHNISRDHT 89 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~--Ls~-e~i~r~~~~L~~f~~~~~~~~v~~~~i 89 (576)
+.+..||+|+.|+|..+++. +|+. +...+.+... .....|. -.+ +-.+.++++++ +++++.+++..+|
T Consensus 6 ~~~lgIDiGtts~k~~l~d~--~G~i--l~~~~~~~~~--~~p~~g~~e~d~~~~~~~~~~~i~---~~~~~~~~~~~~I 76 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQ--KGEI--AGVAQREFKQ--YFPQSGWVEHDANEIWTSVLAVMT---EVINENDVRADQI 76 (501)
T ss_dssp CEEEEEEECSSEEEEEEECT--TSCE--EEEEEEECCC--BCSSTTCCEECHHHHHHHHHHHHH---HHHHTTTCCGGGE
T ss_pred cEEEEEEeCccceEEEEEcC--CCCE--EEEEEeeccc--ccCCCCcEEECHHHHHHHHHHHHH---HHHHhcCCCcccE
Confidence 47889999999999999964 4543 4333333221 1112232 223 33444455554 4455667766678
Q ss_pred EEEeehh
Q 008139 90 RAVATAA 96 (576)
Q Consensus 90 ~~vATsA 96 (576)
.+|+-++
T Consensus 77 ~~Igis~ 83 (501)
T 3g25_A 77 AGIGITN 83 (501)
T ss_dssp EEEEEEE
T ss_pred EEEEEEC
Confidence 8877553
No 87
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=71.23 E-value=7.8 Score=41.57 Aligned_cols=75 Identities=16% Similarity=0.148 Sum_probs=43.4
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCH-HHHHHHHHHHHHHHHHHHHCCCCcccE
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--IST-QSQARSVESLLMFRDIIQSHNISRDHT 89 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~--Ls~-e~i~r~~~~L~~f~~~~~~~~v~~~~i 89 (576)
+.+..||+|+.|+|..+++. +|.. +...+.+... .....|. -.+ +-.+.+++++++ ++++.+++..+|
T Consensus 5 ~~~lgIDiGtts~k~~l~d~--~G~i--l~~~~~~~~~--~~p~~g~~e~dp~~~~~~~~~~i~~---~~~~~~~~~~~I 75 (506)
T 3h3n_X 5 NYVMAIDQGTTSSRAIIFDR--NGKK--IGSSQKEFPQ--YFPKSGWVEHNANEIWNSVQSVIAG---AFIESGIRPEAI 75 (506)
T ss_dssp CEEEEEEECSSEEEEEEEET--TSCE--EEEEEEECCC--BCSSTTCCEECHHHHHHHHHHHHHH---HHHHHTCCGGGE
T ss_pred CEEEEEEcCCCceEEEEECC--CCCE--EEEEEEecCc--cCCCCCcEEECHHHHHHHHHHHHHH---HHHHcCCChhhe
Confidence 57899999999999999974 5643 4333333321 1112222 123 334445555554 444556665678
Q ss_pred EEEeehh
Q 008139 90 RAVATAA 96 (576)
Q Consensus 90 ~~vATsA 96 (576)
.+|+-++
T Consensus 76 ~~Igis~ 82 (506)
T 3h3n_X 76 AGIGITN 82 (506)
T ss_dssp EEEEEEE
T ss_pred EEEEeeC
Confidence 8877554
No 88
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=71.06 E-value=49 Score=32.45 Aligned_cols=135 Identities=11% Similarity=0.007 Sum_probs=79.6
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEEEEe
Q 008139 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (576)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (576)
.+..||||.+++++.+++.. + ++.+.+.++. ... .++.++...+.++++.+.. ...+. -.++|
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~--~---~l~~~~~~~~------~~~--~~~~~~~i~~~i~~~~~~~-~~~i~---gigi~ 64 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGK--R---LLSKVVVPTP------KEG--GERVAEALAEAAERAEREA-GVRGE---AIGLG 64 (302)
T ss_dssp CEEEEEECSSEEEEEEECSS--S---BSCCEEEECC------SSC--HHHHHHHHHHHHHHHHHHH-TCCCS---SEEEE
T ss_pred EEEEEEEcCCEEEEEEEeCC--C---cEEEEEEcCC------CCC--hHHHHHHHHHHHHHHHhhc-cCCce---EEEEE
Confidence 36899999999999999643 3 2333333321 111 1667777777777775533 22332 24566
Q ss_pred ehhhhh--------cCCh-----HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEe
Q 008139 94 TAAVRA--------AENK-----DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIG 160 (576)
Q Consensus 94 TsAvR~--------A~N~-----~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~ 160 (576)
....=+ +.|- -.+.+.+++++|++|.+.+.-.=|-+.-.-.-..- ..++.+++-+|.| +--.++
T Consensus 65 ~pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~~~--~~~~~~~l~~GtG-iG~gii 141 (302)
T 3vov_A 65 TPGPLDFRRGVIRFAPNIPGVQDFPIRRILEEATGRPVFLENDANAAALAEHHLGAAQ--GEESSLYLTVSTG-IGGGVV 141 (302)
T ss_dssp ESSCEETTTTEEC---CCTTCTTCCHHHHHHHHHSSCEEEEEHHHHHHHHHHHHSTTT--TCSCEEEEEESSS-EEEEEE
T ss_pred ecccEeCCCCEEEcCCCCCCcCCCChHHHHHHhhCCCEEEEechHHHHHHHHHhCCCC--CCCCEEEEEECCc-eeEEEE
Confidence 554322 3332 24568888999999999887665544432111111 2345899999988 455556
Q ss_pred eCCeEeeE
Q 008139 161 KRGKVVFC 168 (576)
Q Consensus 161 ~~~~~~~~ 168 (576)
-+|++...
T Consensus 142 ~~g~l~~G 149 (302)
T 3vov_A 142 LGGRVLRG 149 (302)
T ss_dssp ETTEECCC
T ss_pred ECCEEeeC
Confidence 67877643
No 89
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=70.50 E-value=12 Score=40.05 Aligned_cols=77 Identities=16% Similarity=0.156 Sum_probs=44.9
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCC--CH-HHHHHHHHHHHHHHHHHHHCCCCcccE
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSI--ST-QSQARSVESLLMFRDIIQSHNISRDHT 89 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~L--s~-e~i~r~~~~L~~f~~~~~~~~v~~~~i 89 (576)
+.+..||+|+.|+|..+++. +|. ++.+.+.+... .....|.. .+ +-.+.+++++++. ++..+++..+|
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~--~g~--~~~~~~~~~~~--~~p~~g~~e~d~~~~~~~~~~~i~~~---~~~~~~~~~~i 73 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDR--ESN--IHGIGQYEFPQ--HYPRPGWVEHNPEEIWDAQLRAIKDA---IQSARIEPNQI 73 (497)
T ss_dssp CEEEEEEECSSEEEEEEECT--TCC--EEEEEEEECCC--BCCSTTCCEECHHHHHHHHHHHHHHH---HHHHTCCGGGE
T ss_pred cEEEEEecCCchhEEEEECC--CCC--EEEEEEeccce--ecCCCCcEEECHHHHHHHHHHHHHHH---HHhcCCCcccE
Confidence 36889999999999999964 454 44444444322 11222322 23 3345555666554 34456655568
Q ss_pred EEEeehhhh
Q 008139 90 RAVATAAVR 98 (576)
Q Consensus 90 ~~vATsAvR 98 (576)
.+|+-++-+
T Consensus 74 ~~Igis~~~ 82 (497)
T 2zf5_O 74 AAIGVTNQR 82 (497)
T ss_dssp EEEEEEECS
T ss_pred EEEEEecCC
Confidence 777755544
No 90
>3m5f_A Metal dependent phosphohydrolase; CAS3, prokaryotic immune system, HD-motif, structural genomics, PSI-2; 2.30A {Methanocaldococcus jannaschii} PDB: 3s4l_A
Probab=70.13 E-value=4.4 Score=39.13 Aligned_cols=58 Identities=17% Similarity=0.115 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHhhcccccC--------------CCCchhhhHHHHHcCCCCCCCCHHH-HHHHHHHHHhccCCC
Q 008139 398 DLEYLEAACLLHNIGHFTS--------------KKGYHKQSCHIIMNGDHLYGYSTDE-IKLIALLTRFHRKKF 456 (576)
Q Consensus 398 ~r~LL~~AalLHdIG~~I~--------------~~~h~~Hs~yiI~ns~~l~G~s~~E-~~~iA~i~ryhrk~~ 456 (576)
.+.++.+||+|||+|+.-. ...|.--|++++...- ......++ ..++++.+.+|.+..
T Consensus 55 ~~~ll~~a~llHDiGKa~~~FQ~k~l~~~~~~~~~~He~lSa~fl~~~l-~~~~~~~~la~lialAI~sHH~~l 127 (244)
T 3m5f_A 55 VDEFMKILIKLHDIGKASKIYQRAIINDQEKLMGFRHELVSAYYTYHIL-LKKFGDKNLAFIGALTVMLHHEPI 127 (244)
T ss_dssp HHHHHHHHHHHTTGGGGBHHHHHHHHCTTSCCSSCCHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHTTTSCC
T ss_pred HHHHHHHHHHHcccccCCHHHHHHHHhccCCCCCCChHHHHHHHHHHHH-hhccchHHHHHHHHHHHHHhCHHH
Confidence 4588999999999998521 2345555666554331 11112233 456666555554444
No 91
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=69.46 E-value=15 Score=39.43 Aligned_cols=76 Identities=14% Similarity=0.219 Sum_probs=44.6
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCHH-HHHHHHHHHHHHHHHHHHCCCCcccE
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQ-SQARSVESLLMFRDIIQSHNISRDHT 89 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~--Ls~e-~i~r~~~~L~~f~~~~~~~~v~~~~i 89 (576)
+.+..||+|+.|+|..+++. +|.. +...+.+...- ....|. -.++ -.+.++++++ +++++.+++..+|
T Consensus 3 ~~~lgIDiGtts~k~~l~d~--~G~i--l~~~~~~~~~~--~p~~g~~e~dp~~~~~~~~~~i~---~~~~~~~~~~~~I 73 (510)
T 2p3r_A 3 KYIVALDQGTTSSRAVVMDH--DANI--ISVSQREFEQI--YPKPGWVEHDPMEIWATQSSTLV---EVLAKADISSDQI 73 (510)
T ss_dssp CEEEEEEECSSEEEEEEECT--TCCE--EEEEEEECCCB--CSSTTCCEECHHHHHHHHHHHHH---HHHHHTTCCGGGE
T ss_pred cEEEEEEcCCcceEEEEECC--CCCE--EEEEEEecccc--cCCCCcEEECHHHHHHHHHHHHH---HHHHHcCCChhhe
Confidence 46889999999999999964 5643 44444333221 112222 2233 3444445554 4455667766678
Q ss_pred EEEeehhh
Q 008139 90 RAVATAAV 97 (576)
Q Consensus 90 ~~vATsAv 97 (576)
.+|+-++-
T Consensus 74 ~~Igis~~ 81 (510)
T 2p3r_A 74 AAIGITNQ 81 (510)
T ss_dssp EEEEEEEC
T ss_pred EEEEEeCC
Confidence 88876554
No 92
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=68.93 E-value=31 Score=33.57 Aligned_cols=125 Identities=14% Similarity=0.071 Sum_probs=74.9
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEEEEee
Q 008139 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVAT 94 (576)
Q Consensus 15 ~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vAT 94 (576)
+..||||...+++.+++. +|. ++.+.+.++. .+. +..++.+.++.+ +..+ .-.++|.
T Consensus 6 ~lgidiggt~i~~~l~d~--~g~--il~~~~~~~~----------~~~---~~~~~~i~~~i~---~~~i---~gigi~~ 62 (292)
T 2gup_A 6 IATIDIGGTGIKFASLTP--DGK--ILDKTSISTP----------ENL---EDLLAWLDQRLS---EQDY---SGIAMSV 62 (292)
T ss_dssp EEEEEEETTEEEEEEECT--TCC--EEEEEEECCC----------SSH---HHHHHHHHHHHT---TSCC---SEEEEEE
T ss_pred EEEEEECCCEEEEEEECC--CCC--EEEEEEEeCC----------CCH---HHHHHHHHHHHH---hCCC---cEEEEEe
Confidence 688999999999999864 454 3444333321 122 233333333322 2233 2356666
Q ss_pred hhhhh--------cCCh-----HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEee
Q 008139 95 AAVRA--------AENK-----DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGK 161 (576)
Q Consensus 95 sAvR~--------A~N~-----~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~ 161 (576)
...=+ +.|- -.+.+.+ +++|++|.+.+.-.=|-+.-.- ... ..++.+++-+|.| +-..++-
T Consensus 63 pG~vd~~~g~v~~~~~~~~~~~~~l~~~l-~~~~~pv~v~NDa~aaa~~e~~--~~~--~~~~~v~l~~GtG-iG~giv~ 136 (292)
T 2gup_A 63 PGAVNQETGVIDGFSAVPYIHGFSWYEAL-SSYQLPVHLENDANCVGLSELL--AHP--ELENAACVVIGTG-IGGAMII 136 (292)
T ss_dssp SSEECTTTCBEESCCSSGGGSSSBHHHHT-GGGCCCEEEEEHHHHHHHHHHH--HCT--TCSSEEEEEESSS-EEEEEEE
T ss_pred cCcccCCCCEEEecCCCCcccCCCHHHHH-HHcCCCEEEechHHHHHHHHHH--hcC--CCCeEEEEEECCc-eEEEEEE
Confidence 65422 2332 2466778 8899999998877666555432 211 2346899999998 5667777
Q ss_pred CCeEeeE
Q 008139 162 RGKVVFC 168 (576)
Q Consensus 162 ~~~~~~~ 168 (576)
+|++...
T Consensus 137 ~G~l~~G 143 (292)
T 2gup_A 137 NGRLHRG 143 (292)
T ss_dssp TTEEECC
T ss_pred CCEEEec
Confidence 8887653
No 93
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=68.79 E-value=97 Score=30.85 Aligned_cols=149 Identities=13% Similarity=0.148 Sum_probs=82.5
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHH-HHHHHHHHHCCCCcccEEEEe
Q 008139 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESL-LMFRDIIQSHNISRDHTRAVA 93 (576)
Q Consensus 15 ~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L-~~f~~~~~~~~v~~~~i~~vA 93 (576)
+-.||.++......+++ +|+ ++....+ |+-. ...|..++++-..-.+.| .-..+.+++.|++..++.+||
T Consensus 3 iLgIdts~~~~~val~~---~g~--i~~~~~~--~~~~--~~gg~~p~~~~~~h~~~l~~~i~~~L~~agi~~~did~Ia 73 (330)
T 2ivn_A 3 ALGIEGTAHTLGIGIVS---EDK--VLANVFD--TLTT--EKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIA 73 (330)
T ss_dssp EEEEECSSSEEEEEEEC---SSC--EEEEEEE--ECCC--TTCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEE
T ss_pred EEEEEccCCCeEEEEEE---CCE--EEEEEEE--Eeec--ccCCcCchhhHHHHHHHHHHHHHHHHHHcCCCHHHCcEEE
Confidence 67899999999998884 343 3432222 2221 112333333333333333 345556666677655666666
Q ss_pred eh-------hhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEeeCCeEe
Q 008139 94 TA-------AVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVV 166 (576)
Q Consensus 94 Ts-------AvR~A~N~~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~ 166 (576)
.+ ++|.. -.|.+.+....+.++--++-- +|... ++.. .+. +.+ +++.+.||.|+++..+++++.
T Consensus 74 ~~~GPG~~~~lrvg---~~~ak~la~~~~~pl~~v~h~-~aHa~--~a~~-~~~-~~~-~~l~v~GG~t~~i~~~~~~~~ 144 (330)
T 2ivn_A 74 FSQGPGLGPALRVV---ATAARALAVKYRKPIVGVNHC-IAHVE--ITKM-FGV-KDP-VGLYVSGGNTQVLALEGGRYR 144 (330)
T ss_dssp EEEESSCHHHHHHH---HHHHHHHHHHTTCCEEEEEHH-HHHHH--GGGG-GTC-CSC-EEEEECSSCEEEEEEETTEEE
T ss_pred EECCCCchHHHHHH---HHHHHHHHHHcCCCEEeeCcH-HHHHH--HHhh-cCC-CCC-eEEEEcCCCceEEEEcCCeEE
Confidence 42 34442 346666666788888877653 44321 2211 222 222 677777789999988888765
Q ss_pred eE-EeechhHHHHHHh
Q 008139 167 FC-ESVNLGHVSLSEK 181 (576)
Q Consensus 167 ~~-~SlplG~vrl~e~ 181 (576)
.. .+++-++-++.+.
T Consensus 145 ~lg~t~dds~Gr~fD~ 160 (330)
T 2ivn_A 145 VFGETLDIGIGNAIDV 160 (330)
T ss_dssp EEEEBSSSCHHHHHHH
T ss_pred EEEeecCchhHHHHHH
Confidence 32 3555544444443
No 94
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=67.86 E-value=7.1 Score=38.15 Aligned_cols=131 Identities=14% Similarity=0.133 Sum_probs=76.4
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEEEEee
Q 008139 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVAT 94 (576)
Q Consensus 15 ~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vAT 94 (576)
+..||+|..++++.+++. +|. ++.+.+.++. . ..+ .++.++.+.+.++++.. . + ...++|.
T Consensus 3 ~lgidiggt~~~~~l~d~--~g~--il~~~~~~~~--~---~~~--~~~~~~~i~~~i~~~~~---~--~---~~igi~~ 63 (289)
T 2aa4_A 3 TLAIDIGGTKLAAALIGA--DGQ--IRDRRELPTP--A---SQT--PEALRDALSALVSPLQA---H--A---QRVAIAS 63 (289)
T ss_dssp EEEEEECSSEEEEEEECT--TCC--EEEEEEEECC--S---SCC--HHHHHHHHHHHHTTTGG---G--C---SEEEEEE
T ss_pred EEEEEeCCCEEEEEEECC--CCC--EEEEEEecCC--C---CCC--HHHHHHHHHHHHHHHHh---h--C---CEEEEEe
Confidence 678999999999999865 454 4444433321 1 011 23344444444444322 1 2 2356666
Q ss_pred hhhhh--------cCCh-----HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEee
Q 008139 95 AAVRA--------AENK-----DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGK 161 (576)
Q Consensus 95 sAvR~--------A~N~-----~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~ 161 (576)
...-+ +.|- -.+.+.+++.+|++|.+.+.-.=|-+.-.-.-.. ... +.+++-+|.| +-..+..
T Consensus 64 pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaa~~e~~~g~~--~~~-~~v~l~~GtG-iG~gii~ 139 (289)
T 2aa4_A 64 TGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQALDG--DIT-DMVFITVSTG-VGGGVVS 139 (289)
T ss_dssp SSEEETTEEECSSGGGGGGGTTCCHHHHHHHHHCSCEEEEEHHHHHHHHHHHTSCT--TCC-CEEEEEESSS-EEEEEEE
T ss_pred ccceeCCCCEEEeCCCCCcccCCChHHHHHHHHCCCEEEechHHHHHHHHHHhCCC--CCc-eEEEEEeCcc-EEEEEEE
Confidence 55422 2222 2467888889999999988655554442211111 122 6899999999 6777777
Q ss_pred CCeEeeE
Q 008139 162 RGKVVFC 168 (576)
Q Consensus 162 ~~~~~~~ 168 (576)
+|++...
T Consensus 140 ~G~l~~G 146 (289)
T 2aa4_A 140 GCKLLTG 146 (289)
T ss_dssp TTEEECC
T ss_pred CCEEeeC
Confidence 8887643
No 95
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=65.27 E-value=30 Score=34.26 Aligned_cols=136 Identities=17% Similarity=0.153 Sum_probs=75.5
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEEEE
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (576)
..+..||||.++++..+++. +|. ++.+.+.++. +. ..++.++...+.++++.+ .++.+ ..-..+
T Consensus 7 ~~~lgiDiGgt~i~~~l~d~--~G~--il~~~~~~~~--~~------~~~~~~~~i~~~i~~~~~---~~~~~-i~gigi 70 (310)
T 3htv_A 7 NVVAGVDMGATHIRFCLRTA--EGE--TLHCEKKRTA--EV------IAPGLVSGIGEMIDEQLR---RFNAR-CHGLVM 70 (310)
T ss_dssp EEEEEEEECSSEEEEEEEET--TSC--EEEEEEEEHH--HH------HTTCHHHHHHHHHHHHHH---HHTEE-EEEEEE
T ss_pred CEEEEEEeCCCEEEEEEECC--CCC--EEEEEEecCc--cc------cHHHHHHHHHHHHHHHHH---hcCCC-eeEEEE
Confidence 46889999999999999975 454 3443333221 10 012334444445544432 33321 011233
Q ss_pred eehh--------hhhcCCh-------HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeE
Q 008139 93 ATAA--------VRAAENK-------DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEF 157 (576)
Q Consensus 93 ATsA--------vR~A~N~-------~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl 157 (576)
|... ++.+.|- -.+.+.+++++|++|.+.+.-.=|-+....- ... ...+.+++-+|.| +--
T Consensus 71 ~~pG~vd~~~g~v~~~~~l~~~~~~~~~l~~~l~~~~~~pv~v~NDanaaa~~e~~~-~~~--~~~~~~~v~~GtG-iG~ 146 (310)
T 3htv_A 71 GFPALVSKDKRTIISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQLSWDVVE-NRL--TQQLVLAAYLGTG-MGF 146 (310)
T ss_dssp EESSCBCTTSSCBCSCCSSSCCHHHHTTHHHHHHHHHTSCEEEEEHHHHHHHHHHHH-TTC--TTSCEEEEEESSS-EEE
T ss_pred eccccEeCCCCEEEeCCCCCCccccCccHHHHHHHHhCCCEEEeeHHHHHHHHHHhh-ccc--CCceEEEEEecee-EEE
Confidence 4332 3334442 1467889999999999988776554432211 112 2345778888876 344
Q ss_pred EEeeCCeEeeE
Q 008139 158 VIGKRGKVVFC 168 (576)
Q Consensus 158 ~~~~~~~~~~~ 168 (576)
.++-+|++...
T Consensus 147 gii~~G~l~~G 157 (310)
T 3htv_A 147 AVWMNGAPWTG 157 (310)
T ss_dssp EEEETTEEECC
T ss_pred EEEECCEEeec
Confidence 45667877654
No 96
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=64.34 E-value=1e+02 Score=29.41 Aligned_cols=141 Identities=16% Similarity=0.157 Sum_probs=79.5
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEE-eeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEEEE
Q 008139 14 LFASIDMGTSSFKLLIIRAYPNGKFLTID-TLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (576)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~l~-~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (576)
.+..||||.+++++.+++.. +|. ++. +.+.++. .. .+ .++.++...+.++++.+... ..+...-.++
T Consensus 13 ~~lgidiggt~i~~~l~dl~-~g~--i~~~~~~~~~~--~~---~~--~~~~~~~i~~~i~~~~~~~~--~~~~~~~igi 80 (267)
T 1woq_A 13 PLIGIDIGGTGIKGGIVDLK-KGK--LLGERFRVPTP--QP---AT--PESVAEAVALVVAELSARPE--APAAGSPVGV 80 (267)
T ss_dssp CEEEEEECSSEEEEEEEETT-TTE--EEEEEEEEECC--SS---CC--HHHHHHHHHHHHHHHHTSTT--CCCTTCCEEE
T ss_pred EEEEEEECCCEEEEEEEECC-CCe--EEEEEEecCCC--cc---CC--HHHHHHHHHHHHHHHHHhcc--ccCccceEEE
Confidence 47889999999999999763 243 232 2222221 00 00 23445556666666543111 0111122456
Q ss_pred eehhh------hhcCCh------HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEe
Q 008139 93 ATAAV------RAAENK------DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIG 160 (576)
Q Consensus 93 ATsAv------R~A~N~------~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~ 160 (576)
|.... ..+.|- -.+.+.+++++|++|.+.+.-.=|-+.-.-.-.... .+++.+++-+|.| +-..++
T Consensus 81 ~~pG~v~~g~v~~~~~l~~~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~~g~~~~-~~~~~~~l~~GtG-IG~giv 158 (267)
T 1woq_A 81 TFPGIIQHGVVHSAANVDKSWLNTDIDALLTARLGRPVEVINDADAAGLAEARYGAGAG-VKGTVLVITLGTG-IGSAFI 158 (267)
T ss_dssp EESSCEETTEECCCTTSCGGGTTCBHHHHHHHHHTSCEEEEEHHHHHHHHHHHHSTTTT-CCSEEEEEEESSS-EEEEEE
T ss_pred EccceEcCCEEEeCCCCCCCCCCCCHHHHHHHHHCCCEEEeehhHHHHHHHHHhCCCCC-CCCcEEEEEECcc-eEEEEE
Confidence 65543 233342 346688889999999998877766665321111111 1123578899987 777788
Q ss_pred eCCeEeeE
Q 008139 161 KRGKVVFC 168 (576)
Q Consensus 161 ~~~~~~~~ 168 (576)
-+|++...
T Consensus 159 ~~G~l~~G 166 (267)
T 1woq_A 159 FDGKLVPN 166 (267)
T ss_dssp ETTEEETT
T ss_pred ECCEEccC
Confidence 88887643
No 97
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=62.95 E-value=20 Score=38.39 Aligned_cols=73 Identities=15% Similarity=0.158 Sum_probs=40.0
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCHHH-HHHHHHHHHHHHHHHHHCCCCcccE
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQS-QARSVESLLMFRDIIQSHNISRDHT 89 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~--Ls~e~-i~r~~~~L~~f~~~~~~~~v~~~~i 89 (576)
+.+..||+|+.|+|..+++. +|.. +...+.+...- ....|. -.++. .+.+++++++ +++..+ .+|
T Consensus 4 ~~~lgIDiGtts~K~~l~d~--~G~i--l~~~~~~~~~~--~p~~g~~e~dp~~~~~~~~~~i~~---~~~~~~---~~I 71 (504)
T 3ll3_A 4 KYIIGMDVGTTATKGVLYDI--NGKA--VASVSKGYPLI--QTKVGQAEEDPKLIFDAVQEIIFD---LTQKID---GKI 71 (504)
T ss_dssp EEEEEEEECSSEEEEEEEET--TSCE--EEEEEEECCCB--CSSTTCCEECHHHHHHHHHHHHHH---HHHTCS---SEE
T ss_pred CEEEEEEecCCceEEEEEcC--CCCE--EEEEEeeccee--cCCCCcEEECHHHHHHHHHHHHHH---HHHhCC---CCe
Confidence 57899999999999999974 4643 43333332221 112221 23333 3444455544 344444 357
Q ss_pred EEEeehhh
Q 008139 90 RAVATAAV 97 (576)
Q Consensus 90 ~~vATsAv 97 (576)
.+|+-++-
T Consensus 72 ~~Igis~q 79 (504)
T 3ll3_A 72 AAISWSSQ 79 (504)
T ss_dssp EEEEEEEC
T ss_pred EEEEEECC
Confidence 77775553
No 98
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=61.27 E-value=17 Score=39.32 Aligned_cols=74 Identities=14% Similarity=0.229 Sum_probs=43.7
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeee---eccCCCcCCCCCH-HHHHHHHHHHHHHHHHHHHCCCCccc
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVI---LGRDLSSSCSIST-QSQARSVESLLMFRDIIQSHNISRDH 88 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vr---Lg~~~~~~g~Ls~-e~i~r~~~~L~~f~~~~~~~~v~~~~ 88 (576)
+.+..||+|+.|+|..+++. +|+. +...+.+.. -..|-. .-.+ +-.+.+++++++. ++..+++..+
T Consensus 5 ~~~lgIDiGtts~ka~l~d~--~G~i--l~~~~~~~~~~~p~~g~~---eqdp~~~~~~~~~~i~~~---~~~~~~~~~~ 74 (554)
T 3l0q_A 5 SYFIGVDVGTGSARAGVFDL--QGRM--VGQASREITMFKPKADFV---EQSSENIWQAVCNAVRDA---VNQADINPIQ 74 (554)
T ss_dssp CEEEEEEECSSEEEEEEEET--TSCE--EEEEEEECCCEEEETTEE---EECHHHHHHHHHHHHHHH---HHHHTCCGGG
T ss_pred cEEEEEEECcccEEEEEECC--CCCE--EEEEEEecccccCCCCcc---ccCHHHHHHHHHHHHHHH---HHHcCCCHhH
Confidence 46899999999999999973 5653 333333321 111111 1223 3345555666554 4445676667
Q ss_pred EEEEeehh
Q 008139 89 TRAVATAA 96 (576)
Q Consensus 89 i~~vATsA 96 (576)
|.+|+-++
T Consensus 75 I~~Igis~ 82 (554)
T 3l0q_A 75 VKGLGFDA 82 (554)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEcC
Confidence 88888665
No 99
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=60.67 E-value=6.8 Score=34.93 Aligned_cols=86 Identities=16% Similarity=0.228 Sum_probs=57.4
Q ss_pred eEEEEEecccceEEEEEEEeCCCC-EEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEEEE
Q 008139 14 LFASIDMGTSSFKLLIIRAYPNGK-FLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (576)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~-~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (576)
++-.||.|+-.+-+.|.+. .|. ..++... +-.. .|.-..++.+.+++++|++ ...+|
T Consensus 4 riLGiDpG~~riGvAv~d~--~g~~a~p~~~I----~~~~-------------~r~~~~~~~l~~li~~~~~---~~ivV 61 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDE--MGWTAQGIETI----KINE-------------AEGDYGLSRLSELIKDYTI---DKIVL 61 (150)
T ss_dssp EEEEEEECSSEEEEEEECT--TSSSEEEEEEE----ECBG-------------GGTBCCHHHHHHHHTTSEE---EEEEE
T ss_pred EEEEEEccCCEEEEEEEEC--CCCEEeeEEEE----EcCC-------------cchHHHHHHHHHHHHHcCC---CEEEE
Confidence 4789999999999988864 343 2322222 1111 0223456777888888987 35778
Q ss_pred e-------ehhhhhcCChHHHHHHHHHHcCCcEEEeC
Q 008139 93 A-------TAAVRAAENKDEFVECVREKVGFEVDVLT 122 (576)
Q Consensus 93 A-------TsAvR~A~N~~~fl~~i~~~tG~~i~vIs 122 (576)
+ |+ -+.+.-...|+.++..+.+++|...|
T Consensus 62 GlP~~~nGt~-~~~~~~ar~f~~~L~~~~~lpV~~vD 97 (150)
T 1vhx_A 62 GFPKNMNGTV-GPRGEASQTFAKVLETTYNVPVVLWD 97 (150)
T ss_dssp ECCCCBTTBC-CHHHHHHHHHHHHHHHHHCSCEEEEC
T ss_pred eeeecCCcch-hHHHHHHHHHHHHHHHhhCCCEEEec
Confidence 8 44 34555667899999888899998854
No 100
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=60.13 E-value=18 Score=38.46 Aligned_cols=75 Identities=9% Similarity=0.134 Sum_probs=41.9
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCC--CH-HHHHHHHHHHHHHHHHHHHCCCCcccEE
Q 008139 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSI--ST-QSQARSVESLLMFRDIIQSHNISRDHTR 90 (576)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~L--s~-e~i~r~~~~L~~f~~~~~~~~v~~~~i~ 90 (576)
.+..||+|+.|+|..+++. +|. ++.+.+.+...- ....|.. .+ +-.+.+++++++. +++.+++..+|.
T Consensus 3 ~~lgiDiGtT~~k~~l~d~--~g~--i~~~~~~~~~~~--~p~~g~~e~d~~~~~~~i~~~i~~~---~~~~~~~~~~i~ 73 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTL--EGR--PVAVAKREFRQL--YPKPGWVEHDPLEIWETTLWAAREV---LRRAGAEAGEVL 73 (495)
T ss_dssp CEEEEEECSSEEEEEEECT--TSC--EEEEEEEECCEE--CSSTTCCEECHHHHHHHHHHHHHHH---HHHTTCCGGGCC
T ss_pred EEEEEeeCCcceEEEEECC--CCC--EEEEEEEeecee--cCCCCcEeeCHHHHHHHHHHHHHHH---HHhcCCCcccEE
Confidence 4789999999999999964 454 344444333221 1122222 23 3345555555544 445566544566
Q ss_pred EEeehhh
Q 008139 91 AVATAAV 97 (576)
Q Consensus 91 ~vATsAv 97 (576)
+|+-++-
T Consensus 74 ~Igis~~ 80 (495)
T 2dpn_A 74 ALGITNQ 80 (495)
T ss_dssp EEEEEEC
T ss_pred EEEEeCC
Confidence 6664444
No 101
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=60.06 E-value=29 Score=36.95 Aligned_cols=76 Identities=17% Similarity=0.165 Sum_probs=44.6
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCC--C-HHHHHHHHHHHHHHHHHHHHCCCCcccEE
Q 008139 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSI--S-TQSQARSVESLLMFRDIIQSHNISRDHTR 90 (576)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~L--s-~e~i~r~~~~L~~f~~~~~~~~v~~~~i~ 90 (576)
.+..||+|+.|+|..+++. +|. ++.+...+...- ....|.. . ++-.+.+++++++. +++.+++..+|.
T Consensus 3 ~~lgiDiGtts~k~~l~d~--~G~--i~~~~~~~~~~~--~p~~g~~e~d~~~~~~~i~~~i~~~---~~~~~~~~~~i~ 73 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDH--SGE--IYSTGQLEHDQI--FPRAGWVEHNPEQIWNNVREVVGLA---LTRGNLTHEDIA 73 (504)
T ss_dssp EEEEEEECSSEEEEEEECT--TSC--EEEEEEEECCCB--CSSTTCCEECHHHHHHHHHHHHHHH---HHHTTCCGGGEE
T ss_pred EEEEEecCCcceEEEEECC--CCC--EEEEEEEeccee--cCCCCceeECHHHHHHHHHHHHHHH---HHHcCCCcccEE
Confidence 5789999999999999974 454 344444333221 1222322 2 23445555555544 455566555788
Q ss_pred EEeehhhh
Q 008139 91 AVATAAVR 98 (576)
Q Consensus 91 ~vATsAvR 98 (576)
+|+-++-+
T Consensus 74 ~Igis~~g 81 (504)
T 2d4w_A 74 AVGITNQR 81 (504)
T ss_dssp EEEEEECS
T ss_pred EEEEeCCC
Confidence 88766554
No 102
>2ibn_A Inositol oxygenase; reductase, DIIRON, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: MSE I1N; 1.50A {Homo sapiens} SCOP: a.211.1.4
Probab=58.39 E-value=4.2 Score=39.07 Aligned_cols=25 Identities=20% Similarity=0.395 Sum_probs=21.3
Q ss_pred HHHHHHHHHhhcccccCCCCchhhh
Q 008139 400 EYLEAACLLHNIGHFTSKKGYHKQS 424 (576)
Q Consensus 400 ~LL~~AalLHdIG~~I~~~~h~~Hs 424 (576)
..+..||+|||+|.-+.+.++.+|.
T Consensus 79 dw~~laaLlHDLGkll~~~~~~qW~ 103 (250)
T 2ibn_A 79 DWFHLVGLLHDLGKVLALFGEPQWA 103 (250)
T ss_dssp HHHHHHHHHTTGGGHHHHTTCCGGG
T ss_pred hHHHHHHHHhccHhhhcccCCcchh
Confidence 5799999999999988888777664
No 103
>3aql_A Poly(A) polymerase; transferase/RNA, ATP-binding, nucleotide-binding, RNA-bindin transferase, nucleotidyltransferase, ATP binding, A-phospho; 3.00A {Escherichia coli} PDB: 3aqn_A* 3aqk_A 3aqm_A
Probab=58.18 E-value=7.1 Score=40.91 Aligned_cols=54 Identities=4% Similarity=-0.043 Sum_probs=38.9
Q ss_pred HHHHHHHHHh-hcccccC-------C---CCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhcc
Q 008139 400 EYLEAACLLH-NIGHFTS-------K---KGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHR 453 (576)
Q Consensus 400 ~LL~~AalLH-dIG~~I~-------~---~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~ryhr 453 (576)
.+|.+||+|| |||.... . ..|.+-+..++..--...|++.++...++.++..|.
T Consensus 287 ~~L~lAALLH~di~K~~~~~~~~~G~~~~~~h~~~ga~~a~~~~~rl~l~~r~~~~v~~lv~lq~ 351 (415)
T 3aql_A 287 PAFLFAAMFWYPLLETAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQL 351 (415)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhHhcCcchhhhhhhhhhccCCCchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 5788999999 9988521 1 234445566664332369999999999999998773
No 104
>3kq5_A Hypothetical cytosolic protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Coxiella burnetii}
Probab=57.75 E-value=7.5 Score=40.04 Aligned_cols=41 Identities=15% Similarity=0.064 Sum_probs=27.1
Q ss_pred hhHHH-HHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhccccc
Q 008139 361 KAGAQ-CASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT 415 (576)
Q Consensus 361 ~ha~~-V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~~I 415 (576)
+|.-. |+.+|..+-+. +..+ .+-++.++-+||+|||||+-+
T Consensus 78 eHtLerVa~~A~~l~~~----YP~~----------~~~Er~~l~~aALLHDIGKl~ 119 (393)
T 3kq5_A 78 NEGLLRGVNSLNHYIQN----HPEA----------TPLERYALFSAGLLLEVAHAV 119 (393)
T ss_dssp HHHHHHHHHHHHHHHHH----CTTC----------CHHHHHHHHHHHHHTTTTHHH
T ss_pred HHHHHHHHHHHHHHHHh----CCCC----------CchHHHHHHHHHHHhccchhe
Confidence 46555 77777775433 2111 112378999999999999885
No 105
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=56.77 E-value=14 Score=39.32 Aligned_cols=24 Identities=21% Similarity=0.320 Sum_probs=18.9
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCE
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKF 38 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~ 38 (576)
+.+..||+|+.|+|..+++ .+|++
T Consensus 6 ~~~lgIDiGTts~Ka~l~d--~~G~i 29 (482)
T 3h6e_A 6 GATIVIDLGKTLSKVSLWD--LDGRM 29 (482)
T ss_dssp --CEEEEECSSEEEEEEEC--TTSCE
T ss_pred ceEEEEEcCCCCeEEEEEE--CCCcE
Confidence 4688999999999999997 35654
No 106
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=56.40 E-value=93 Score=30.18 Aligned_cols=129 Identities=11% Similarity=0.128 Sum_probs=67.8
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEEEEee
Q 008139 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVAT 94 (576)
Q Consensus 15 ~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vAT 94 (576)
+-+||||-.++++-+++ ++ +++...+.++. . -+.+.+ ...+.++++.++.+..++..++=
T Consensus 4 lL~IDIGNT~iK~gl~d---~~--~l~~~~r~~T~-~--------~t~de~------~~~l~~ll~~~~~~~~~I~~iiI 63 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFD---GD--EIKLRFRHTSK-V--------STSDEL------GIFLKSVLRENNCSPETIRKIAI 63 (266)
T ss_dssp EEEEEECSSEEEEEEEE---TT--EEEEEEEEECS-C--------CCHHHH------HHHHHHHHHTTTCCGGGCCEEEE
T ss_pred EEEEEECCCeEEEEEEE---CC--EEEEEEEecCC-C--------CCHHHH------HHHHHHHHHHcCCChhhceEEEE
Confidence 67999999999999995 23 34544544432 1 122222 23345566677765444544444
Q ss_pred hhhhhcCChHHHHHHHHHHcCCcEEEeChHHH----------------HHHHHhhhhccCCCCCCceEEEEeCCCceeEE
Q 008139 95 AAVRAAENKDEFVECVREKVGFEVDVLTGEQE----------------AKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFV 158 (576)
Q Consensus 95 sAvR~A~N~~~fl~~i~~~tG~~i~vIsg~eE----------------A~l~~~gv~~~l~~~~~~~lviDIGGGStEl~ 158 (576)
|.+.-. -...+...+++..+.++.+++.... --....|+.... +..+.+|+|.|..-|==.
T Consensus 64 SSVvp~-~~~~l~~~~~~~~~~~~~~v~~~~~~g~~~~y~~P~~lG~DR~~~~vaA~~~~--~~~~~iVVD~GTA~T~d~ 140 (266)
T 3djc_A 64 CSVVPQ-VDYSLRSACVKYFSIDPFLLQAGVKTGLNIKYRNPVEVGADRIANAIAATHSF--PNQNIIVIDFGTATTFCA 140 (266)
T ss_dssp EESCHH-HHHHHHHHHHHHTCCCCEECCSSSCCCCEECCSSGGGSCHHHHHHHHHHHHHS--TTSEEEEEEESSEEEEEE
T ss_pred ecchHh-HHHHHHHHHHHHcCCCeEEEcCCCCCCcccCCCChhhhHHHHHHHHHHHHHhc--CCCCEEEEECCCeeEEEE
Confidence 433322 1223444455556777766662210 111222222222 234689999999887333
Q ss_pred EeeCCeEe
Q 008139 159 IGKRGKVV 166 (576)
Q Consensus 159 ~~~~~~~~ 166 (576)
+-.+|...
T Consensus 141 v~~~g~~l 148 (266)
T 3djc_A 141 ISHKKAYL 148 (266)
T ss_dssp ECTTSEEE
T ss_pred EcCCCcEE
Confidence 33445544
No 107
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=56.40 E-value=25 Score=34.35 Aligned_cols=127 Identities=13% Similarity=0.072 Sum_probs=68.3
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeee-eeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEEEEe
Q 008139 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPV-ILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (576)
Q Consensus 15 ~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~v-rLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (576)
+..||+|..++|..+++ + |. ++.+.+.+. .... .+ .++.+++..+++++.. ....+ .-.+++
T Consensus 2 ~lgiDiGGT~i~~~l~d-~--g~--il~~~~~~~~~~~~----~~--~~~~~~~i~~~i~~~~---~~~~i---~~igig 64 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVL-N--GA--VIKRLGTKGINPFF----QS--EEEIQQKLTASLLPQL---PEGKF---NAVYFY 64 (291)
T ss_dssp --CEECCTTCEEEEEEC-S--SS--EEEEEEECCCCTTT----SC--STTTTTTTTC-------------------CEEE
T ss_pred EEEEEeccccEEEEEEc-C--Ce--EEEEEECCCCCccc----CC--HHHHHHHHHHHHHHhc---Ccccc---cEEEEE
Confidence 46799999999999996 4 43 344333221 1100 00 0111222222232221 11123 124566
Q ss_pred ehhhhhcCChHHHHHHHHHHcCC--cEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEeeCCeEee
Q 008139 94 TAAVRAAENKDEFVECVREKVGF--EVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVF 167 (576)
Q Consensus 94 TsAvR~A~N~~~fl~~i~~~tG~--~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~ 167 (576)
+..+- ..++..+.+.+++.++. ++.|-+.-.=|.+.-. . .++++++=+|.||.-..+..+|++..
T Consensus 65 ~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~------g--~~~~v~v~~GTGi~g~gi~~~G~~~~ 131 (291)
T 1zxo_A 65 GAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC------G--QKAGIACILGTGSNSCFYNGKEIVSN 131 (291)
T ss_dssp CTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT------T--TSCBEEEEESSSEEEEEECSSSEEEE
T ss_pred cCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc------C--CCCcEEEEeCCChheEEECCCCcEEE
Confidence 77653 45556788889999994 9999888776655432 1 23467777999996555556777643
No 108
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=56.38 E-value=23 Score=37.82 Aligned_cols=78 Identities=8% Similarity=-0.007 Sum_probs=43.0
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCC--CH-HHHHHHHHHHHHHHHHHHHCCCCcccE
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSI--ST-QSQARSVESLLMFRDIIQSHNISRDHT 89 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~L--s~-e~i~r~~~~L~~f~~~~~~~~v~~~~i 89 (576)
+.+..||||+.++|..+++. +|. ++.+.+.+...- ....|.. .+ +-.+.+++++++..+... .+++..+|
T Consensus 4 ~~~lgIDiGtT~~k~~l~d~--~g~--i~~~~~~~~~~~--~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~-~~~~~~~i 76 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYDE--ELN--IVHSNNLNHEQK--CLKPGWYEHDPIEIMTNLYNLMNEGIKVLK-DKYTSVII 76 (503)
T ss_dssp EEEEEEEECSSEEEEEEEET--TCC--EEEEEEEECCCB--CCSTTCCEECHHHHHHHHHHHHHHHHHHHH-HHSSSCEE
T ss_pred cEEEEEEeCCcceEEEEECC--CCC--EEEEEEEeeeee--cCCCCcEEECHHHHHHHHHHHHHHHHHHhh-cCCCccce
Confidence 46789999999999999974 454 444444443221 1122222 23 345566666665543220 03433467
Q ss_pred EEEeehhh
Q 008139 90 RAVATAAV 97 (576)
Q Consensus 90 ~~vATsAv 97 (576)
.+|+-++-
T Consensus 77 ~~Igis~~ 84 (503)
T 2w40_A 77 KCIGITNQ 84 (503)
T ss_dssp EEEEEEEC
T ss_pred EEEEEcCC
Confidence 77775544
No 109
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=55.04 E-value=18 Score=39.47 Aligned_cols=78 Identities=15% Similarity=0.157 Sum_probs=41.6
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeec---cCCCc------CC--CCCHHHH-HHHHHHHHHHHHHHH
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILG---RDLSS------SC--SISTQSQ-ARSVESLLMFRDIIQ 80 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg---~~~~~------~g--~Ls~e~i-~r~~~~L~~f~~~~~ 80 (576)
+.+..||+|+.|+|..+++.. +|++ +.....+...+ ..... .| .-.++.+ +.+++++++. ++
T Consensus 5 ~~~lgIDiGTts~Ka~l~d~~-~G~i--~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~---l~ 78 (572)
T 3jvp_A 5 KYTIGVDYGTESGRAVLIDLS-NGQE--LADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAV---MK 78 (572)
T ss_dssp CEEEEEEECSSEEEEEEEETT-TCCE--EEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHH---HH
T ss_pred CEEEEEecCCcceEEEEEECC-CCeE--EEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHHH---HH
Confidence 468899999999999999752 5643 33333322210 00000 11 1234333 5556666554 44
Q ss_pred HCCCCcccEEEEeehh
Q 008139 81 SHNISRDHTRAVATAA 96 (576)
Q Consensus 81 ~~~v~~~~i~~vATsA 96 (576)
+.+++..+|.+|+-++
T Consensus 79 ~~~~~~~~I~~Igis~ 94 (572)
T 3jvp_A 79 ESGVDADDVIGIGVDF 94 (572)
T ss_dssp C---CCSCEEEEEEEE
T ss_pred HcCCChhHEEEEEEec
Confidence 4466556788877555
No 110
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=53.95 E-value=1.2e+02 Score=29.46 Aligned_cols=127 Identities=19% Similarity=0.219 Sum_probs=72.1
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCCcccEEEEe
Q 008139 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSH-NISRDHTRAVA 93 (576)
Q Consensus 15 ~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~-~v~~~~i~~vA 93 (576)
+..||||.+++++.+++. +|. ++.+.+.++. .. ++ +..++.+..+ +++. .+ .-..||
T Consensus 6 ~lgiDiGgt~i~~~l~d~--~G~--il~~~~~~~~------~~---~~---~~~~~~i~~~---~~~~~~i---~gigi~ 63 (297)
T 4htl_A 6 IAAFDIGGTALKMGVVLP--HGE--IILTKSAEIS------GS---DG---DQILAEMKVF---LAENTDV---TGIAVS 63 (297)
T ss_dssp EEEEEECSSEEEEEEECT--TSC--EEEEEEEECS------TT---CH---HHHHHHHHHH---HHTCTTC---CEEEEE
T ss_pred EEEEEeCCCeEEEEEECC--CCC--EEEEEEecCC------CC---CH---HHHHHHHHHH---HhhcCCe---eEEEEe
Confidence 789999999999999864 454 3444433321 11 12 2233333333 2222 22 224455
Q ss_pred ehhhh--------hcCCh-----HHHHHHHHHHcCCcEEEeChHHHHHHHH--hhhhccCCCCCCceEEEEeCCCceeEE
Q 008139 94 TAAVR--------AAENK-----DEFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVLSVDIGGGSTEFV 158 (576)
Q Consensus 94 TsAvR--------~A~N~-----~~fl~~i~~~tG~~i~vIsg~eEA~l~~--~gv~~~l~~~~~~~lviDIGGGStEl~ 158 (576)
....= .+.|- -.+.+.+++++|++|.+.+.-.=+-+.- .|... ..++.+++-+|.| +--.
T Consensus 64 ~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~pV~v~NDa~aaal~E~~~g~~~----~~~~~~~l~~GtG-iG~g 138 (297)
T 4htl_A 64 APGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETGLPVAIENDANCALLAEKWLGKGQ----DLDDFLCLTIGTG-IGGG 138 (297)
T ss_dssp ESSEECTTTCEEEECTTCGGGTTEEHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTT----TCSSEEEEEESSS-EEEE
T ss_pred cCcceeCCCCEEEeCCCCCCccCCCHHHHHHHHHCcCEEEecHHHHHHHHHHHhCCCC----CCCcEEEEEECcc-eEEE
Confidence 54332 22332 2467888999999999988755544432 22221 2245889999988 4555
Q ss_pred EeeCCeEeeE
Q 008139 159 IGKRGKVVFC 168 (576)
Q Consensus 159 ~~~~~~~~~~ 168 (576)
++-+|++...
T Consensus 139 iv~~G~l~~G 148 (297)
T 4htl_A 139 IFSNGELVRG 148 (297)
T ss_dssp EEETTEECCC
T ss_pred EEECCEEEec
Confidence 6667887653
No 111
>2e5n_A RNA polymerase II elongation factor ELL2; ELL_N2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.43 E-value=19 Score=29.71 Aligned_cols=52 Identities=17% Similarity=0.218 Sum_probs=36.8
Q ss_pred CcchHHHHHHHHHHhhccccc--CCCCchhhhHHHHHcCCCCCCCCHHHHHHHHHHH
Q 008139 395 EDKDLEYLEAACLLHNIGHFT--SKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLT 449 (576)
Q Consensus 395 ~~~~r~LL~~AalLHdIG~~I--~~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~ 449 (576)
+++++..| -++|.+|++.= +..++-+..+|-=.+-+ ++|+|..|+.++-.+.
T Consensus 42 ~~~d~~~l--~~iL~eVa~~~~~~~~y~Lk~~~~~eVq~d-Wp~Yte~erq~v~r~L 95 (100)
T 2e5n_A 42 NQKDKNSL--GAILQQVANLNSKDLSYTLKDYVFKELQRD-WPGYSEIDRRSLESVL 95 (100)
T ss_dssp CHHHHHHH--HHHHHHHEEEETTTTEEEECSTHHHHSCTT-CTTCCTTHHHHHHHHH
T ss_pred CHHHHHHH--HHHHHHHHhcCCcCCeeehhHHHHHHhccC-CCCCCHHHHHHHHHHH
Confidence 44444444 56999999983 23344455577777888 9999999999887654
No 112
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=48.96 E-value=71 Score=32.53 Aligned_cols=133 Identities=16% Similarity=0.105 Sum_probs=72.6
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEee-eeeeeeccCCCcCCCCCH-HHHHHHHH---HHHHHHHHHHHCCCCcc
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTL-KQPVILGRDLSSSCSIST-QSQARSVE---SLLMFRDIIQSHNISRD 87 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~-k~~vrLg~~~~~~g~Ls~-e~i~r~~~---~L~~f~~~~~~~~v~~~ 87 (576)
..+..||||.+.+++.+++ . | +++.+. +.++. . . ++ +.++.+.+ .++++.. ..+
T Consensus 9 ~~~lgiDIGgt~i~~~l~d-~--G--~il~~~~~~~~~--~------~-~~~~~l~~i~~~~~~i~~~~~----~~i--- 67 (366)
T 3mcp_A 9 RIVMTLDAGGTNFVFSAIQ-G--G--KEIADPVVLPAC--A------D-CLDKCLGNLVEGFKAIQAGLP----EAP--- 67 (366)
T ss_dssp CEEEEEECSSSEEEEEEEE-T--T--EECSCCEEEECC--T------T-CHHHHHHHHHHHHHHHHTTCS----SCC---
T ss_pred CEEEEEEECcceEEEEEEE-C--C--EEEEEEEEEECC--C------C-CHHHHHHHHHHHHHHHHHHhh----cCC---
Confidence 6788999999999999997 3 4 344433 33321 1 1 22 23333333 2222211 122
Q ss_pred cEEEEeehhh--------hhcCCh------HHHHHHHHHHcCCcEEEeChHHHHHHHH--hhhh----c-----cCCCCC
Q 008139 88 HTRAVATAAV--------RAAENK------DEFVECVREKVGFEVDVLTGEQEAKFVY--MGVL----Q-----FLPVFD 142 (576)
Q Consensus 88 ~i~~vATsAv--------R~A~N~------~~fl~~i~~~tG~~i~vIsg~eEA~l~~--~gv~----~-----~l~~~~ 142 (576)
.-.+||.... ..+.|- -.+.+.+++++|++|.+.+.-.=+-+.- .|.. . .-....
T Consensus 68 ~gIGIavPG~Vd~~~G~i~~~~nlp~w~~~~~l~~~L~~~~g~PV~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~~ 147 (366)
T 3mcp_A 68 VAISFAFPGPADYQAGIIGDLPNFPSFRGGVALGPFLEDIFGIPVFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRY 147 (366)
T ss_dssp CEEEEECCSSEETTTTEECCCTTCGGGTTCBCHHHHHHHHHCSCEEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCC
T ss_pred eEEEEEecceEeCCCCEEEeCCCcccccCCCCHHHHHHHHHCCCEEEechhhHHHHHHHHhCCCcccccccccccccCCC
Confidence 2245554433 234453 2456788999999999998766555542 2300 0 011123
Q ss_pred CceEEEEeCCCceeEEEeeCCeEee
Q 008139 143 RLVLSVDIGGGSTEFVIGKRGKVVF 167 (576)
Q Consensus 143 ~~~lviDIGGGStEl~~~~~~~~~~ 167 (576)
++.+++-+|.| +--.++-+|++..
T Consensus 148 ~~~v~l~lGtG-IG~givi~G~l~~ 171 (366)
T 3mcp_A 148 KNLLGVTLGTG-FGAGVVIDGELLR 171 (366)
T ss_dssp CEEEEEEESSS-EEEEEEETTEECC
T ss_pred CcEEEEEECCc-ceEEEEECCEEec
Confidence 45788888876 4445556777654
No 113
>2doa_A RNA polymerase II elongation factor ELL; C19ORF17, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.5.81
Probab=46.91 E-value=17 Score=30.29 Aligned_cols=53 Identities=17% Similarity=0.206 Sum_probs=37.8
Q ss_pred CcchHHHHHHHHHHhhcccc--cCCCCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHH
Q 008139 395 EDKDLEYLEAACLLHNIGHF--TSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTR 450 (576)
Q Consensus 395 ~~~~r~LL~~AalLHdIG~~--I~~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~r 450 (576)
++.++..| -++|.+|+.. =+..++-+..+|-=.+-+ ++|+|..||.++-.+..
T Consensus 41 ~~~d~~~l--~~iL~eVA~~~~~~~~y~Lk~~~y~eVq~d-Wp~Yte~erq~v~r~l~ 95 (104)
T 2doa_A 41 TQADKDAL--DGLLQQVANMSAKDGTCTLQDCMYKDVQKD-WPGYSEGDQQLLKRVLV 95 (104)
T ss_dssp CHHHHHHH--HHHHHHSSEECSSSCEEECCSSGGGGCCSC-CTTCCSHHHHHHHHHHH
T ss_pred CHHHHHHH--HHHHHHHHhcCCcCCeeeehHHHHHHhcCC-CCCCCHHHHHHHHHHHH
Confidence 34444444 5699999988 344444555577777888 99999999999887654
No 114
>2cqz_A 177AA long hypothetical protein; hypothetical proteins, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.60A {Pyrococcus horikoshii}
Probab=46.15 E-value=22 Score=32.41 Aligned_cols=42 Identities=17% Similarity=0.106 Sum_probs=27.4
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhccccc
Q 008139 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT 415 (576)
Q Consensus 361 ~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~~I 415 (576)
.|+-+|+.+|..|-+.++. .+.+ -+...+..+|+|||++-.+
T Consensus 35 eHs~rVa~~A~~la~~~~~-~~~~------------~d~~~v~~~aLlHD~~E~~ 76 (177)
T 2cqz_A 35 DHSFGVAFITLVLADVLEK-RGKR------------IDVEKALKMAIVHDLAEAI 76 (177)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TTCC------------CCHHHHHHHHHHTTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCC------------CCHHHHHHHHHHhchHHHH
Confidence 7999999999887554321 2211 1224456899999998543
No 115
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=44.32 E-value=80 Score=27.46 Aligned_cols=86 Identities=15% Similarity=0.246 Sum_probs=55.6
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEEEEe
Q 008139 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (576)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (576)
.+-.||.|+-.|=+.|.+.. ...-.++...+.. ... ..+..+.+++++|++. ..+||
T Consensus 4 ~iLglD~G~kriGvAvsd~~-~~~A~pl~ti~~~-----~~~--------------~~~~~l~~li~e~~v~---~iVvG 60 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRI-TGTARPLPAIKAQ-----DGT--------------PDWNIIERLLKEWQPD---EIIVG 60 (138)
T ss_dssp EEEEEECCSSEEEEEEEETT-TTEEEEEEEEEEE-----TTE--------------ECHHHHHHHHHHHCCS---EEEEE
T ss_pred eEEEEEeCCCEEEEEEEcCC-CCEEeeEEEEEcC-----Ccc--------------hHHHHHHHHHHHcCCC---EEEEe
Confidence 47899999999988888642 2223444333221 100 1245667778888884 46677
Q ss_pred -------ehhhhhcCChHHHHHHHHHHcCCcEEEeCh
Q 008139 94 -------TAAVRAAENKDEFVECVREKVGFEVDVLTG 123 (576)
Q Consensus 94 -------TsAvR~A~N~~~fl~~i~~~tG~~i~vIsg 123 (576)
|..- .|.-...|.++++.+++++|...+.
T Consensus 61 lP~~mdGt~~~-~~~~~~~f~~~L~~~~~lpV~~~DE 96 (138)
T 1nu0_A 61 LPLNMDGTEQP-LTARARKFANRIHGRFGVEVKLHDE 96 (138)
T ss_dssp EEECTTSCBCH-HHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred cccCCCcCcCH-HHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 3322 2344578999999999999998774
No 116
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=40.66 E-value=68 Score=31.89 Aligned_cols=59 Identities=10% Similarity=0.088 Sum_probs=42.2
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeee-eeeeccCCCcCCCCCHHHHHHHHHHHHH
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQ-PVILGRDLSSSCSISTQSQARSVESLLM 74 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~-~vrLg~~~~~~g~Ls~e~i~r~~~~L~~ 74 (576)
....+||||..|+-+.+++ ++.+....+..- .|||-+..+.++..+++.++++.+.++.
T Consensus 131 ~~~lviDIGGGStEl~~~~---~~~~~~~~Sl~lG~vrl~e~f~~~~~~~~~~~~~~~~~i~~ 190 (315)
T 3mdq_A 131 HISLAMDIGGGSVEFIIGN---KNEILWKQSFEIGGQRLIDRFHVHDPMREDDRVMMHNYFDE 190 (315)
T ss_dssp CCEEEEEECSSCEEEEEEC---SSCEEEEEEESCCHHHHHHHSCCCSSCCHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCceEEEEEE---CCeEeeeEEEechhhHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 4578999999999999985 344433333332 3677777777888999888877766554
No 117
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=38.50 E-value=69 Score=34.21 Aligned_cols=25 Identities=36% Similarity=0.482 Sum_probs=20.2
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCE
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKF 38 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~ 38 (576)
+.+..||+|+.|+|..+++.. +|++
T Consensus 5 ~~~lgIDiGtts~ka~l~d~~-~G~i 29 (515)
T 3i8b_A 5 TLVAGVDTSTQSCKVRVTDAE-TGEL 29 (515)
T ss_dssp CEEEEEEECSSEEEEEEEETT-TCCE
T ss_pred cEEEEEEeccccEEEEEEECC-CCeE
Confidence 468999999999999999742 5643
No 118
>1miw_A TRNA CCA-adding enzyme; tRNA nucleotidyltransferase, translation, transferase; HET: ATP; 3.00A {Geobacillus stearothermophilus} SCOP: a.173.1.1 d.218.1.4 PDB: 1miv_A* 1miy_A*
Probab=38.05 E-value=22 Score=37.03 Aligned_cols=43 Identities=12% Similarity=0.095 Sum_probs=32.3
Q ss_pred HHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccC
Q 008139 400 EYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRK 454 (576)
Q Consensus 400 ~LL~~AalLHdIG~~I~~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~ryhrk 454 (576)
.++.||++|||+|. +-...+. . =++||.+++..++.++++|..
T Consensus 248 ~~l~~aaLlhdigk--------~~a~~~l-~---rLkls~~~~~~v~~Lv~~~~~ 290 (404)
T 1miw_A 248 REERWALLCHALGV--------QESRPFL-R---AWKLPNKVVDEAGAILTALAD 290 (404)
T ss_dssp HHHHHHHHHHHHTC--------SCHHHHH-H---HTTCCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhCCH--------HHHHHHH-H---HcCCCHHHHHHHHHHHHHHHh
Confidence 46889999999996 2223333 2 268999999999999998754
No 119
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=35.55 E-value=1.1e+02 Score=29.67 Aligned_cols=138 Identities=9% Similarity=0.094 Sum_probs=0.0
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEEEEe
Q 008139 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (576)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (576)
.+-+||||-.++++-+++-. +.+...+..+....-.+ +-...+.++++.++++..++..++
T Consensus 1 MlL~IDIGNT~ik~gl~~~~-----~l~~~~r~~T~~~~t~d--------------e~~~~l~~ll~~~~~~~~~i~~ii 61 (268)
T 2h3g_X 1 MIFVLDVGNTNAVLGVFEEG-----ELRQHWRMETDRHKTED--------------EYGMLVKQLLEHEGLSFEDVKGII 61 (268)
T ss_dssp CEEEEEECSSEEEEEEEETT-----EEEEEEEEECCTTCCHH--------------HHHHHHHHHHHHTTCCGGGCCEEE
T ss_pred CEEEEEECcCcEEEEEEECC-----EEEEEEEecCCCcCCHH--------------HHHHHHHHHHHHcCCCcccCcEEE
Q ss_pred ehhhhhcCChHHHHHHHHHHcCCcEEEeCh--------------HHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEE
Q 008139 94 TAAVRAAENKDEFVECVREKVGFEVDVLTG--------------EQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVI 159 (576)
Q Consensus 94 TsAvR~A~N~~~fl~~i~~~tG~~i~vIsg--------------~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~ 159 (576)
=|.+- ..-...+.+.+++..+.++.++ + ++=.-=-+.++.........+.+|+|.|..-|==.+
T Consensus 62 ISSVv-p~~~~~l~~~~~~~~~~~~~~v-~~~~~~gl~~~y~~P~~lG~DR~~~~vaA~~~~~~~~iVVD~GTAtT~d~v 139 (268)
T 2h3g_X 62 VSSVV-PPIMFALERMCEKYFKIKPLVV-GPGIKTGLNIKYENPREVGADRIVNAVAGIHLYGSPLIIVDFGTATTYCYI 139 (268)
T ss_dssp EEESC-HHHHHHHHHHHHHHTCCCCEEC-STTCCCCCEECSSCGGGSCHHHHHHHHHHHHHHCSSEEEEEESSEEEEEEE
T ss_pred EEccC-hhHHHHHHHHHHHHhCCCeEEE-cCCCCCCccccCCChhhcCHHHHHHHHHHHHhcCCCEEEEECCCceEEEEE
Q ss_pred eeCCeEeeEEeec
Q 008139 160 GKRGKVVFCESVN 172 (576)
Q Consensus 160 ~~~~~~~~~~Slp 172 (576)
-.+|+..-..=+|
T Consensus 140 ~~~g~~lGG~I~P 152 (268)
T 2h3g_X 140 NEEKHYMGGVITP 152 (268)
T ss_dssp CTTSEEEEEEEEE
T ss_pred CCCCcEEEEEECc
No 120
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=31.96 E-value=31 Score=36.48 Aligned_cols=23 Identities=22% Similarity=0.303 Sum_probs=19.5
Q ss_pred CCceEEEEEecccceEEEEEEEe
Q 008139 11 PQTLFASIDMGTSSFKLLIIRAY 33 (576)
Q Consensus 11 ~~~~~AvIDIGSNsirL~I~e~~ 33 (576)
+.+.+..||+|+.|+|..+++.+
T Consensus 2 ~~~~~lgiDiGtts~k~~l~d~~ 24 (489)
T 2uyt_A 2 TFRNCVAVDLGASSGRVMLARYE 24 (489)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEE
T ss_pred CcceEEEEEecCCCceEEEEEec
Confidence 34568899999999999999864
No 121
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=30.40 E-value=40 Score=34.05 Aligned_cols=130 Identities=23% Similarity=0.288 Sum_probs=57.2
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEEEEee
Q 008139 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVAT 94 (576)
Q Consensus 15 ~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vAT 94 (576)
+-.+|||-=.++... .+.+|.+ .+. ..+.-|=++. +++-++|+.+.+. ++ ..-++=|
T Consensus 2 iiG~DIGGAn~K~a~--~~~~g~~-~~~--~~~~PlW~~~-----------~~L~~~l~~~~~~-----~~--~~avtMT 58 (334)
T 3cet_A 2 ILGIDIGGANTKITE--LHENGEF-KVH--HLYFPMWKNN-----------DKLAEVLKTYSND-----VS--HVALVTT 58 (334)
T ss_dssp EEEEEEC--CEEEEE--ECSTTCC-EEE--EC-------------------------------------CC--EEEEEEC
T ss_pred eeEEEecccceeeee--ecCCCce-EEE--EEecCCcCCc-----------hHHHHHHHHHHhh-----hc--cEEEEec
Confidence 457999988777755 4445654 222 2222233332 2222333333221 11 3345666
Q ss_pred hhhhhc-CChH----HHHHHHHHHcCCcEEEeCh------HHHHHHHHhhhhccCC---------CCCCceEEEEeCCCc
Q 008139 95 AAVRAA-ENKD----EFVECVREKVGFEVDVLTG------EQEAKFVYMGVLQFLP---------VFDRLVLSVDIGGGS 154 (576)
Q Consensus 95 sAvR~A-~N~~----~fl~~i~~~tG~~i~vIsg------~eEA~l~~~gv~~~l~---------~~~~~~lviDIGGGS 154 (576)
.-+-++ .++. .+++.+.+.++-+|.++.+ .++++=...-+..+-+ ...++++++||||=.
T Consensus 59 gELaD~f~~k~eGV~~I~~~v~~~~~~~v~i~~~dGG~l~~~~a~~~p~~~aaanw~ASa~~~A~~~~~~~llvDIGsTT 138 (334)
T 3cet_A 59 AELADSYETKKEGVDNILNAAESAFGSNISVFDSNGNFISLESAKTNNMKVSASNWCGTAKWVSKNIEENCILVDMGSTT 138 (334)
T ss_dssp CC------CTTHHHHHHHHHHHHHHTTCEEEECSSSCEEETTHHHHCGGGTBCCSSHHHHHHHHHHTCSSEEEEEECSSC
T ss_pred hhhhhhhcCHHHHHHHHHHHHHHhcCCceEEEecCCCcccHHHHhhCHHHHHhcCHHHHHHHHHHhcCCCEEEEEcCcch
Confidence 666655 3332 2335556666666754433 2234311222211100 011358999999999
Q ss_pred eeEEEeeCCeEee
Q 008139 155 TEFVIGKRGKVVF 167 (576)
Q Consensus 155 tEl~~~~~~~~~~ 167 (576)
|-|+.+.+|++..
T Consensus 139 TDIipi~~G~pl~ 151 (334)
T 3cet_A 139 TDIIPIVEGKVVA 151 (334)
T ss_dssp EEEEEEETTEECC
T ss_pred hhhhhhcCCeecc
Confidence 9999999998854
No 122
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=30.34 E-value=49 Score=32.21 Aligned_cols=29 Identities=10% Similarity=0.068 Sum_probs=26.4
Q ss_pred eEEEEeCCCceeEEEeeCCeEeeEEeech
Q 008139 145 VLSVDIGGGSTEFVIGKRGKVVFCESVNL 173 (576)
Q Consensus 145 ~lviDIGGGStEl~~~~~~~~~~~~Slpl 173 (576)
.|++|||+-++-+.+++++++...++++-
T Consensus 4 lL~IDIGNT~iK~gl~d~~~l~~~~r~~T 32 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGDEIKLRFRHTS 32 (266)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEEC
T ss_pred EEEEEECCCeEEEEEEECCEEEEEEEecC
Confidence 58999999999999999999998888873
No 123
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=30.03 E-value=2e+02 Score=28.22 Aligned_cols=122 Identities=12% Similarity=0.155 Sum_probs=65.1
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEEEE
Q 008139 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (576)
..+..||||...+|+.+++.. +|.+ +...+.++ .. . +...+.++.|.+ +.+.+ ..-.+|
T Consensus 14 ~~~lgiDiGGT~i~~~l~dl~-~g~i--~~~~~~~~---~~-~----------~~~~~~i~~~~~---~~~~~-i~gigi 72 (332)
T 1sz2_A 14 KYALVGDVGGTNARLALCDIA-SGEI--SQAKTYSG---LD-Y----------PSLEAVIRVYLE---EHKVE-VKDGCI 72 (332)
T ss_dssp CEEEEEEEETTEEEEEEEETT-TCCE--EEEEEEEG---GG-C----------SCHHHHHHHHHH---HSCCC-CCEEEE
T ss_pred CEEEEEEechhheEEEEEECC-CCcE--EEEEEecC---CC-c----------CCHHHHHHHHHH---hcCCC-ccEEEE
Confidence 567899999999999999753 4543 33333332 11 1 112233444433 33321 122455
Q ss_pred eehhhhh-----cCCh---HHHHHHHHHHcCCc-EEEeChHHHHHHHHhhhh--------ccCCCCCCceEEEEeCCCce
Q 008139 93 ATAAVRA-----AENK---DEFVECVREKVGFE-VDVLTGEQEAKFVYMGVL--------QFLPVFDRLVLSVDIGGGST 155 (576)
Q Consensus 93 ATsAvR~-----A~N~---~~fl~~i~~~tG~~-i~vIsg~eEA~l~~~gv~--------~~l~~~~~~~lviDIGGGSt 155 (576)
|+...=+ +.|- -. .+.+++++|++ |.+.+.-.=+-|.-.-.- ..-....++.+++-+|.|-=
T Consensus 73 ~~pG~vd~~~~~~~nl~w~~~-~~~l~~~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTGiG 151 (332)
T 1sz2_A 73 AIACPITGDWVAMTNHTWAFS-IAEMKKNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGLG 151 (332)
T ss_dssp EESSCCCSSEECCSSSCCCEE-HHHHHHHHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSSEE
T ss_pred EEeCceeCCEEeeeCCCCcCC-HHHHHHHhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCccce
Confidence 6554322 1221 12 46778899998 998887665555432110 00011234578899998854
Q ss_pred e
Q 008139 156 E 156 (576)
Q Consensus 156 E 156 (576)
-
T Consensus 152 ~ 152 (332)
T 1sz2_A 152 V 152 (332)
T ss_dssp E
T ss_pred E
Confidence 3
No 124
>1vfg_A A-adding enzyme, poly A polymerase; transferase, RNA, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: APC; 2.80A {Aquifex aeolicus} SCOP: a.173.1.1 d.218.1.4
Probab=29.93 E-value=47 Score=34.22 Aligned_cols=43 Identities=9% Similarity=0.020 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhcc
Q 008139 399 LEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHR 453 (576)
Q Consensus 399 r~LL~~AalLHdIG~~I~~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~ryhr 453 (576)
..++.+||+|||+|. +-...+.. =++||.+++..++.++++|.
T Consensus 256 ~~~l~laaLlhdi~~--------~~a~~~~~----rL~ls~~~~~~v~~Lv~~h~ 298 (390)
T 1vfg_A 256 YGWLYLLILISNLDY--------ERGKHFLE----EMSAPSWVRETYKFMKFKLG 298 (390)
T ss_dssp HHHHHHHHHHCSCCS--------STTHHHHH----HTTCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHccCCH--------HHHHHHHH----HcCCCHHHHHHHHHHHHHHH
Confidence 358999999999995 11222222 26799999999999998773
No 125
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=29.61 E-value=66 Score=32.04 Aligned_cols=60 Identities=17% Similarity=0.066 Sum_probs=38.9
Q ss_pred CceEEEEEecccceEEEEEEEeCCCCEEEEEeeee-eeeeccCCCcCCCCCHHHHHHHHHHHHH
Q 008139 12 QTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQ-PVILGRDLSSSCSISTQSQARSVESLLM 74 (576)
Q Consensus 12 ~~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~-~vrLg~~~~~~g~Ls~e~i~r~~~~L~~ 74 (576)
.....+||||..|+-+.+++ ++.+....+..- .|||-+..+.++..+++.++++.+.++.
T Consensus 137 ~~~~lvvDIGGGStEl~~~~---~~~~~~~~Sl~~G~v~l~e~~~~~~~~~~~~~~~~~~~i~~ 197 (315)
T 1t6c_A 137 EGEVCVVDQGGGSTEYVFGK---GYKVREVISLPIGIVNLTETFFKQDPPTEEEVKRFFEFLEK 197 (315)
T ss_dssp CSEEEEEEEETTEEEEEEEE---TTEEEEEEEECCCHHHHHHHHCCSSSCCHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCcEEEEEEe---CCceeeEEEEeccHHHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 44689999999999999985 343322222211 2456666666678888877776655554
No 126
>2paq_A 5'-deoxynucleotidase YFBR; HD domain phosphoh structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; 2.10A {Escherichia coli} SCOP: a.211.1.1 PDB: 2par_A* 2pau_A*
Probab=29.39 E-value=48 Score=30.81 Aligned_cols=47 Identities=11% Similarity=0.029 Sum_probs=29.6
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCCCC
Q 008139 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKG 419 (576)
Q Consensus 361 ~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~~I~~~~ 419 (576)
+|+-+|+.+|..|=..-.+.++- +-+......+|+|||+|..+-.+-
T Consensus 34 eHS~~VA~lA~~la~~~~~~~~~------------~vD~~~~~~~aLlHDi~E~~~GDi 80 (201)
T 2paq_A 34 EHSLQVAMVAHALAAIKNRKFGG------------NVNAERIALLAMYHDASEVLTGDL 80 (201)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCC------------CCCHHHHHHHHHHTTTTHHHHCCC
T ss_pred HHHHHHHHHHHHHHhhhHHhcCc------------ccCHHHHHHHHHhcccccccCCCC
Confidence 68888888888642111122210 112356778899999999887664
No 127
>4dzo_A Mitotic spindle assembly checkpoint protein MAD1; homodimer, kinetochore, mitosis, spindle checkpoint protein, nucleus, cell cycle; HET: MSE; 1.76A {Homo sapiens}
Probab=28.63 E-value=53 Score=28.10 Aligned_cols=44 Identities=14% Similarity=0.242 Sum_probs=30.3
Q ss_pred hHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCC
Q 008139 103 KDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGG 152 (576)
Q Consensus 103 ~~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGG 152 (576)
..+|.+.+..-+|++|+.++. .++ =+.+....++++.+++|..|
T Consensus 31 s~eFReav~~LlGykId~~~~---~~~---rl~S~Ya~~~~d~L~F~~~~ 74 (123)
T 4dzo_A 31 IQEFRKACYTLTGYQIDITTE---NQY---RLTSLYAEHPGDCLIFKATS 74 (123)
T ss_dssp HHHHHHHHHHHHSEEEEEETT---TEE---EEEETTCSSTTCCEEEEECC
T ss_pred HHHHHHHHHHHhCeEEEEccC---CeE---EEEEeecCCCCCeEEEEecC
Confidence 468999999999999999964 222 22233333335589999865
No 128
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=28.56 E-value=53 Score=35.18 Aligned_cols=57 Identities=18% Similarity=0.116 Sum_probs=38.5
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeee-eeeeccCCCcCCCCCHHHHHHHHHHHH
Q 008139 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQ-PVILGRDLSSSCSISTQSQARSVESLL 73 (576)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~-~vrLg~~~~~~g~Ls~e~i~r~~~~L~ 73 (576)
...+||||..|+-+.+++ ++.+....+..- .|||-+..+.++.++++.++++.+.++
T Consensus 138 ~~lviDIGGGStEl~~~~---~~~~~~~~Sl~lG~vrlte~f~~~~~~~~~~~~~~~~~i~ 195 (513)
T 1u6z_A 138 RKLVIDIGGGSTELVIGE---NFEPILVESRRMGCVSFAQLYFPGGVINKENFQRARMAAA 195 (513)
T ss_dssp CEEEEEECSSCEEEEEEE---TTEEEEEEEESCCHHHHHHHHSGGGBCCHHHHHHHHHHHH
T ss_pred CEEEEEECCCcEEEEEEe---CCeeeEEEEEeccHHHHHHHHcccCCCCHHHHHHHHHHHH
Confidence 478999999999999984 343332222221 246666666778889988888755544
No 129
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=27.79 E-value=40 Score=35.13 Aligned_cols=31 Identities=26% Similarity=0.353 Sum_probs=20.2
Q ss_pred cccccccCCCceEEEEEecccceEEEEEEEe
Q 008139 3 TNTSYMQIPQTLFASIDMGTSSFKLLIIRAY 33 (576)
Q Consensus 3 ~~~~~~~~~~~~~AvIDIGSNsirL~I~e~~ 33 (576)
+|-|-..|+++++=||.-||.|+++.+++..
T Consensus 9 ~~gm~~~Ms~klILviN~GSSS~K~~lf~~~ 39 (415)
T 3sk3_A 9 HHGMASHMSSKLVLVLNCGSSSLKFAIIDAV 39 (415)
T ss_dssp ---------CCEEEEEEECSSCEEEEEEETT
T ss_pred cccccccCCCCeEEEEeCchHhhhheeEECC
Confidence 4556678888999999999999999999853
No 130
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=27.33 E-value=1.3e+02 Score=31.48 Aligned_cols=73 Identities=15% Similarity=0.296 Sum_probs=38.5
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCC--C-HHHHHHHHHHHHHHHHHHHHCCCCcccEEE
Q 008139 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSI--S-TQSQARSVESLLMFRDIIQSHNISRDHTRA 91 (576)
Q Consensus 15 ~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~L--s-~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~ 91 (576)
+..||+|+.|+|..+++. +|.. +...+.+...- ....|.. . ++-.+.+++++++.. ++.+. .+|.+
T Consensus 2 ~lgiDiGtt~~k~~l~d~--~g~~--l~~~~~~~~~~--~p~~g~~e~d~~~~~~~i~~~i~~~~---~~~~~--~~i~~ 70 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNE--QGEV--VAAQTEKLTVS--RPHPLWSEQDPEQWWQATDRAMKALG---DQHSL--QDVKA 70 (484)
T ss_dssp EEEEEECSSEEEEEEECT--TSCE--EEEEEEECCCB--CSSTTCCEECHHHHHHHHHHHHHHHH---HHSCC--TTCCE
T ss_pred EEEEEecCcccEEEEECC--CCCE--EEEEEeccccc--cCCCCCEeECHHHHHHHHHHHHHHHH---HhCCc--cceEE
Confidence 568999999999999964 4543 44443333221 1222222 2 344555666666543 33322 24555
Q ss_pred Eeehhhh
Q 008139 92 VATAAVR 98 (576)
Q Consensus 92 vATsAvR 98 (576)
|+-++-+
T Consensus 71 Igis~~~ 77 (484)
T 2itm_A 71 LGIAGQM 77 (484)
T ss_dssp EEEEECS
T ss_pred EEEcCCc
Confidence 5544433
No 131
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=25.49 E-value=1.6e+02 Score=30.81 Aligned_cols=61 Identities=15% Similarity=0.129 Sum_probs=39.1
Q ss_pred ceEEEEEecccceEEEEEEEeC-CCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHH
Q 008139 13 TLFASIDMGTSSFKLLIIRAYP-NGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDI 78 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~-~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~ 78 (576)
-.|-+||+|-.++|..+++... ++.+.+.. . ..++-..+.. + =.++-.+...++++.|.+.
T Consensus 68 G~~lalDlGGTn~Rv~~V~l~G~~~~~~i~~-~--~~~ip~~~~~-~-~~~~lfd~Ia~~i~~~l~~ 129 (451)
T 1bdg_A 68 GNFLALDLGGTNYRVLSVTLEGKGKSPRIQE-R--TYCIPAEKMS-G-SGTELFKYIAETLADFLEN 129 (451)
T ss_dssp EEEEEEEESSSSEEEEEEEECC-CCCCEEEE-E--EECCCTTTTT-S-BHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCeEEEEEEecCCCCcceEEEE-E--EEecCCcccC-C-CHHHHHHHHHHHHHHHHHh
Confidence 4688999999999999999864 33344421 1 2233332211 1 1266778888999998764
No 132
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=25.08 E-value=1.1e+02 Score=26.77 Aligned_cols=58 Identities=12% Similarity=0.040 Sum_probs=41.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCcccEEEEeehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHH
Q 008139 61 STQSQARSVESLLMFRDIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEA 127 (576)
Q Consensus 61 s~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vATsAvR~A~N~~~fl~~i~~~tG~~i~vIsg~eEA 127 (576)
+.+.+..+ +.+.++++|++...|.++||-.+.. .+.-+-++-++.|++++..+.+|=+
T Consensus 23 ~~~~i~~a------i~~aL~~~~l~~~~v~~latid~K~---dE~gL~~~A~~lg~pl~~~~~eeL~ 80 (145)
T 2w6k_A 23 SAEHLRAL------LERTLGEHGRSLAELDALASIDGKR---DEPGLRQLATLLERPVHFLAPAVLH 80 (145)
T ss_dssp CHHHHHHH------HHHHHHHTTCCGGGCCEEEEECSSS---CCHHHHHHHHHHTSCEEEECHHHHH
T ss_pred CHHHHHHH------HHHHHHHcCCCHHHcceEechHHhC---CCHHHHHHHHHhCCCcEEeCHHHHh
Confidence 55555543 3456677898888899999987653 3345556666789999999877754
No 133
>1ou5_A TRNA CCA-adding enzyme, tRNA-nucleotidyltransferase; polymerase, translation; 3.40A {Homo sapiens} SCOP: a.173.1.1 d.218.1.4
Probab=24.90 E-value=14 Score=39.15 Aligned_cols=41 Identities=10% Similarity=0.008 Sum_probs=31.7
Q ss_pred HHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccC
Q 008139 400 EYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRK 454 (576)
Q Consensus 400 ~LL~~AalLHdIG~~I~~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~ryhrk 454 (576)
.++.+||+|||+|. . .-+.. =++||.+++..+..++++|..
T Consensus 306 ~~l~lAaLlhDi~k----------a-~~i~~---rLkls~~~~~~v~~Lv~~h~~ 346 (448)
T 1ou5_A 306 PVTLLASLFKVQDD----------V-TKLDL---RLKIAKEEKNLGLFIVKNRKD 346 (448)
T ss_dssp HHHHHGGGCCSTTT----------T-HHHHH---HHCCCTTHHHHHHHHTTTTTT
T ss_pred HHHHHHHHhcChHH----------H-HHHHH---HcCCCHHHHHHHHHHHHHHHH
Confidence 47999999999985 2 22222 268999999999999998854
No 134
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=24.52 E-value=16 Score=37.17 Aligned_cols=73 Identities=15% Similarity=0.236 Sum_probs=37.7
Q ss_pred HHHHCCCCcccEEEEeehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCce
Q 008139 78 IIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGST 155 (576)
Q Consensus 78 ~~~~~~v~~~~i~~vATsAvR~A~N~~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGSt 155 (576)
.++.+|.. ++.+|....+.+ ...+.+.+.++ ..|+++.+.++..+..+...--...+. ..+.-+|+=|||||+
T Consensus 28 ~l~~~g~~--~~livtd~~~~~-~~~~~v~~~L~-~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~~~d~IIavGGGsv 100 (354)
T 3ce9_A 28 IIKKGNFK--RVSLYFGEGIYE-LFGETIEKSIK-SSNIEIEAVETVKNIDFDEIGTNAFKI-PAEVDALIGIGGGKA 100 (354)
T ss_dssp HHGGGTCS--EEEEEEETTHHH-HHHHHHHHHHH-TTTCEEEEEEEECCCBHHHHHHHHTTS-CTTCCEEEEEESHHH
T ss_pred HHHhcCCC--eEEEEECccHHH-HHHHHHHHHHH-HcCCeEEEEecCCCCCHHHHHHHHHhh-hcCCCEEEEECChHH
Confidence 34455653 677777666655 23444444443 358888777632222111111111121 123348999999986
No 135
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=23.71 E-value=1e+02 Score=30.98 Aligned_cols=63 Identities=11% Similarity=0.083 Sum_probs=41.3
Q ss_pred ceEEEEEecccceEEEEEEE--eC-CCCEEEEEeee-eeeeeccCCCcCCCCCHHHHHHHHHHHHHH
Q 008139 13 TLFASIDMGTSSFKLLIIRA--YP-NGKFLTIDTLK-QPVILGRDLSSSCSISTQSQARSVESLLMF 75 (576)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~--~~-~~~~~~l~~~k-~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f 75 (576)
....+||||..|.-+.+++- .. .+.+....+.. -.+||-+..+.++..+++.++++.+.++.-
T Consensus 146 ~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~SlplG~v~lt~~~~~~~~~~~~~~~~~~~~i~~~ 212 (343)
T 3cer_A 146 APYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSMNIGSVRMTERHLTNDPPTQTQIDEAVADVDEH 212 (343)
T ss_dssp SSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEESCCHHHHHHHTCCSSSCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCceEEEEeecCccCcccccceeEEEehhHHHHHHHhcccCCCCHHHHHHHHHHHHHH
Confidence 45899999999999999853 11 02221111221 124666777777889999888887776653
No 136
>1f0j_A PDE4B, phosphodiesterase 4B; PDE phosphodiesterase, hydrolase; 1.77A {Homo sapiens} SCOP: a.211.1.2 PDB: 1ro6_A* 1ro9_A* 1ror_A* 3hmv_A* 1tb5_A* 1xm6_A* 1xlx_A* 1xm4_A* 1xlz_A* 1xmu_A* 1xmy_A* 1xn0_A* 1xos_A* 1xot_B* 1y2h_A* 1y2j_A* 3kkt_A* 3g4i_A* 3g4k_A* 3g4l_A* ...
Probab=23.48 E-value=1.6e+02 Score=30.02 Aligned_cols=42 Identities=21% Similarity=0.249 Sum_probs=26.6
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhccc
Q 008139 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGH 413 (576)
Q Consensus 361 ~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~ 413 (576)
.||..|...+-.| +.. -++.. .+++-+..-|-+||+.||+|.
T Consensus 86 ~HA~dV~q~~~~l---l~~-~~l~~-------~l~~le~~alliAAl~HDvdH 127 (377)
T 1f0j_A 86 LHAADVAQSTHVL---LST-PALDA-------VFTDLEILAAIFAAAIHDVDH 127 (377)
T ss_dssp HHHHHHHHHHHHH---HTC-GGGTT-------TSCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHH---Hhc-chhhh-------hCCHHHHHHHHHHHHHcCCCC
Confidence 5777766655433 321 11111 356677788999999999994
No 137
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=22.56 E-value=1.4e+02 Score=24.27 Aligned_cols=83 Identities=17% Similarity=0.266 Sum_probs=54.4
Q ss_pred EEEEEecccceEEEEEEEeCCCCE-EEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEEEEe
Q 008139 15 FASIDMGTSSFKLLIIRAYPNGKF-LTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (576)
Q Consensus 15 ~AvIDIGSNsirL~I~e~~~~~~~-~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (576)
+-+||.|+-.|=+.|.+. .+.+ .++...+. + + . -..+....+++++|++. -.+||
T Consensus 3 iLglD~G~kriGvAvsd~--~~~~A~pl~ti~~-----~--------~---~---~~~~~~l~~li~e~~v~---~iVvG 58 (98)
T 1iv0_A 3 VGALDVGEARIGLAVGEE--GVPLASGRGYLVR-----K--------T---L---EEDVEALLDFVRREGLG---KLVVG 58 (98)
T ss_dssp EEEEEESSSEEEEEEECS--CCSSCCCEEEEEC-----C--------C---H---HHHHHHHHHHHHHHTCC---EEEEE
T ss_pred EEEEEeCCCEEEEEEEeC--CCCeeeeeEEEEc-----c--------C---c---HHHHHHHHHHHHHcCCC---EEEEe
Confidence 679999999988888753 2321 22221110 0 0 0 14466777788889984 46677
Q ss_pred -------ehhhhhcCChHHHHHHHHHHcCCcEEEeCh
Q 008139 94 -------TAAVRAAENKDEFVECVREKVGFEVDVLTG 123 (576)
Q Consensus 94 -------TsAvR~A~N~~~fl~~i~~~tG~~i~vIsg 123 (576)
|.. ..|.-...|.++++.+ +++|...+.
T Consensus 59 lP~~mdGt~~-~~~~~~~~f~~~L~~~-~lpV~~~DE 93 (98)
T 1iv0_A 59 LPLRTDLKES-AQAGKVLPLVEALRAR-GVEVELWDE 93 (98)
T ss_dssp CCCCCCSSSC-CCSSTTHHHHHHHHHT-TCEEEEECC
T ss_pred eccCCCCCcC-HHHHHHHHHHHHHhcC-CCCEEEECC
Confidence 332 4466778999999998 999988763
No 138
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=21.48 E-value=23 Score=36.77 Aligned_cols=73 Identities=19% Similarity=0.223 Sum_probs=39.3
Q ss_pred HHHHCCCCcccEEEEee-hhhhhcCChHHHHHHHHHHcCCcEEEeChHH-HHH--HHHhhhhccCCCCCCceEEEEeCCC
Q 008139 78 IIQSHNISRDHTRAVAT-AAVRAAENKDEFVECVREKVGFEVDVLTGEQ-EAK--FVYMGVLQFLPVFDRLVLSVDIGGG 153 (576)
Q Consensus 78 ~~~~~~v~~~~i~~vAT-sAvR~A~N~~~fl~~i~~~tG~~i~vIsg~e-EA~--l~~~gv~~~l~~~~~~~lviDIGGG 153 (576)
.++.+|.. ++.+|.. ..++...=.+.+.+.++ +.|+++.+.+|-+ +.. -...++..... . +.-+|+=||||
T Consensus 37 ~l~~~g~~--r~liVtd~~~~~~~g~~~~v~~~L~-~~g~~~~~f~~v~~~p~~~~v~~~~~~~~~-~-~~D~IIavGGG 111 (407)
T 1vlj_A 37 EIKNAGIR--KVLFLYGGGSIKKNGVYDQVVDSLK-KHGIEWVEVSGVKPNPVLSKVHEAVEVAKK-E-KVEAVLGVGGG 111 (407)
T ss_dssp HHHHTTCC--EEEEEECSSHHHHSSHHHHHHHHHH-HTTCEEEEECCCCSSCBHHHHHHHHHHHHH-T-TCSEEEEEESH
T ss_pred HHHHcCCC--eEEEEECchHHhhccHHHHHHHHHH-HcCCeEEEecCccCCCCHHHHHHHHHHHHh-c-CCCEEEEeCCh
Confidence 34446653 6777776 66766433445555544 4589998888721 111 11111111111 1 11389999999
Q ss_pred ce
Q 008139 154 ST 155 (576)
Q Consensus 154 St 155 (576)
|+
T Consensus 112 sv 113 (407)
T 1vlj_A 112 SV 113 (407)
T ss_dssp HH
T ss_pred hH
Confidence 96
No 139
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=21.41 E-value=2.5e+02 Score=21.38 Aligned_cols=34 Identities=12% Similarity=0.184 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHhcCceEEEEeecCCCccccC
Q 008139 532 IEAELEKELEHFKKIFKQELLVVGSSSSSNDRKD 565 (576)
Q Consensus 532 ~~~~~~~~~~~f~~~fg~~l~i~~~~~~~~~~~~ 565 (576)
++..+++-.+.+.+..-+.+.|..+.+.|..+|.
T Consensus 31 leralqelekalaragarnvqitisaendeqake 64 (96)
T 2jvf_A 31 LERALQELEKALARAGARNVQITISAENDEQAKE 64 (96)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEEEECSSHHHHHH
T ss_pred HHHHHHHHHHHHHhccccceEEEEEecChHHHHH
Confidence 3567777777888899999999999998876653
No 140
>3eeq_A Putative cobalamin biosynthesis protein G homolog; structural genomics, unknown function, PSI-2, protein structure initiative; 2.30A {Sulfolobus solfataricus} SCOP: c.151.1.1 c.152.1.1
Probab=21.02 E-value=1.3e+02 Score=30.39 Aligned_cols=56 Identities=11% Similarity=0.289 Sum_probs=41.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCcccEEEEeehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHH
Q 008139 60 ISTQSQARSVESLLMFRDIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKF 129 (576)
Q Consensus 60 Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vATsAvR~A~N~~~fl~~i~~~tG~~i~vIsg~eEA~l 129 (576)
.+.+.+..++ .+.+++++++...|.++||-.+. +-++-++.|++++..+.+|=+..
T Consensus 220 ~~~~~i~~ai------~~aL~~~~l~~~~v~~iasid~K--------L~~~A~~l~~pl~~~~~eeL~~v 275 (336)
T 3eeq_A 220 VKMEEIRDGI------YKVLERLNLKRERIGIIASIREE--------VKKIADEFNVRFRLVNEEEINNF 275 (336)
T ss_dssp CCHHHHHHHH------HHHHHHHTCCGGGEEEEEESCTT--------HHHHHHHHTCEEEECCHHHHHTC
T ss_pred CCHHHHHHHH------HHHHHHcCCCHHHhhEEEcHHHH--------HHHHHHHhCCCEEEeCHHHHhhc
Confidence 4666655443 34556678888889999998775 66667788999999999886654
No 141
>1zkl_A HCP1, TM22, high-affinity CAMP-specific 3',5'-cyclic phosphodiesterase 7A; PDE, hydrolase; HET: IBM; 1.67A {Homo sapiens} PDB: 3g3n_A*
Probab=20.24 E-value=1.6e+02 Score=29.72 Aligned_cols=20 Identities=20% Similarity=0.207 Sum_probs=17.0
Q ss_pred cCcchHHHHHHHHHHhhccc
Q 008139 394 FEDKDLEYLEAACLLHNIGH 413 (576)
Q Consensus 394 ~~~~~r~LL~~AalLHdIG~ 413 (576)
+++-+..-+-+||+.||+|.
T Consensus 108 l~~le~~alliAAl~HDv~H 127 (353)
T 1zkl_A 108 VTPWDILLSLIAAATHDLDH 127 (353)
T ss_dssp CCHHHHHHHHHHHHHTTTTC
T ss_pred CCHHHHHHHHHHHHHhccCC
Confidence 56677788999999999995
Done!